BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy15270
         (506 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 234/408 (57%), Positives = 300/408 (73%), Gaps = 7/408 (1%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            + +  +  I D++VGTEHVL ++  G+V  WG   + QLGL +    R P+++  LS+K 
Sbjct: 3615 MTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEIITELSDKG 3674

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLK 128
            IRQ+S GR+HSAAW+APPLP   PG T   SL  GLP +IP  Y HLQ   + LI+AR+ 
Sbjct: 3675 IRQISTGRTHSAAWSAPPLPQRVPGVT--RSLTFGLPANIPSQYDHLQGLSIELIQARVM 3732

Query: 129  LLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGKTM 188
             L+RFSD++Y    L+PL +  Q+ ++  P   LV PSLRPL A RVYT P VR +GKTM
Sbjct: 3733 FLHRFSDMLYSCWTLMPLSH--QEGMKLPPLEGLVSPSLRPLLASRVYTFPFVRCIGKTM 3790

Query: 189  LVGKNFGPSVTVRRLTTK--SKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGA 246
            + GKN+GP + V+R+  +  + +  KP+F QI++QVV +K  +LRLPSRAWKVKL+GEGA
Sbjct: 3791 VQGKNYGPQIIVKRINQEDVTGRKCKPVFVQIAKQVVDIKPQELRLPSRAWKVKLVGEGA 3850

Query: 247  DDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFK 306
            DDAGGVFDDTITEMC E+ SG VPLLV TPN V + G+NRDRY+LNP L+ + Q +  FK
Sbjct: 3851 DDAGGVFDDTITEMCQEITSGIVPLLVPTPNAVNEDGFNRDRYLLNPQLN-TQQHIAWFK 3909

Query: 307  FLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGV 366
            FLGILFGVAIRT+KPL +PL+P++WKLIV E VT  DLE+ D +Y QSLR+IRDIHLSGV
Sbjct: 3910 FLGILFGVAIRTRKPLAIPLAPMMWKLIVGEVVTIEDLEEVDCMYVQSLRSIRDIHLSGV 3969

Query: 367  TEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             E NF E+IPLECFEG S TG++ PIV GG+S+PLTF NR QY+E A+
Sbjct: 3970 GEENFHEVIPLECFEGTSCTGKVLPIVYGGRSIPLTFHNRTQYFERAV 4017



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 71/93 (76%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACGFKHSAVVTS+G L+TFGNGD+G+LG G+  N K+PERV+AL    +  V+CGLNHT
Sbjct: 3469 VACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGYRIGQVACGLNHT 3528

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             C++  G  V+ FG+G+YGKLGLG   +K  PQ
Sbjct: 3529 ACVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQ 3561



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/93 (49%), Positives = 61/93 (65%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I  G++HSA VT +G LYT+G GD+GRLGHG +    VP +V  L    V SV+CG +HT
Sbjct: 490 IHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGL--AEVGSVACGSSHT 547

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + ++  GK V++FG GE+GKLG G  G    PQ
Sbjct: 548 LVVSKDGKTVWSFGSGEHGKLGTGELGKVYRPQ 580



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 1/84 (1%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSN 66
           ++       IVDIS G  H LA+++  +VFAWG NS  Q G G+  +    P  V+ L  
Sbjct: 632 YVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPITRPLKVIGLEG 691

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPH 90
            +IRQ+SAG SHS AWT+     H
Sbjct: 692 VSIRQISAGTSHSMAWTSMSTENH 715



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 4/88 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H+  +   G +Y++G+GDYG+LGHG     K PER+    L K  ++ +  G  H+  + 
Sbjct: 443 HTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKT-IKYIHAGYRHSAAVT 501

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           D GK +Y +G+G++G+LG G++  +  P
Sbjct: 502 DDGK-LYTWGEGDHGRLGHGDSNARYVP 528



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 6/102 (5%)

Query: 406 RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
           ++Q  EA   C F     +  +G +   G G YGRLG G + N  +P+R++    V   S
Sbjct: 380 QVQQVEAGQYCTF----AIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLS 435

Query: 466 VSCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            S G + HT+ +A+ G  VY++GDG+YGKLG GN      P+
Sbjct: 436 SSKGSDGHTLALAETG-VVYSWGDGDYGKLGHGNCATHKQPE 476



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 6/108 (5%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V ++ G +H   V++ G++F +GN    +LGLG+  N + P+ V+AL  
Sbjct: 3456 RQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEG 3515

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG------LPQDI 108
              I QV+ G +H+A  +   +   T G      L LG      LPQ +
Sbjct: 3516 YRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKV 3563



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)

Query: 409  YYEAAIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
            Y    +ACG  H+A V+++G  ++TFG GDYG+LG G      +P++V  +  + ++ V 
Sbjct: 3516 YRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIKKVG 3575

Query: 468  CGLNHTVCIADKGKAVYAFG 487
            CG + T+ +   GK V+  G
Sbjct: 3576 CGTHLTLFLTKDGK-VFVCG 3594



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--- 470
            I CG   + V+ S+G +   G G YGRLG G + +      + +L    +  ++  +   
Sbjct: 3362 IICGQNCTFVIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSD 3421

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ +A+ G+ V+++GDG++GKLG GN   +  P+
Sbjct: 3422 GHSLALAESGE-VFSWGDGDFGKLGHGNPDRQRRPR 3456



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 3/79 (3%)

Query: 9    IPAFKNIHIVDI--SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
            I + +   I D+  SVG++ H LA++ +G+VF+WG+    +LG GN    R P+ + AL 
Sbjct: 3403 ISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQ 3462

Query: 66   NKNIRQVSAGRSHSAAWTA 84
             + + QV+ G  HSA  T+
Sbjct: 3463 TEQVVQVACGFKHSAVVTS 3481



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 2/78 (2%)

Query: 413 AIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++ACG  H+ VV+ +G  +++FG+G++G+LG G       P+ V AL  + ++ V  G  
Sbjct: 539 SVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTW 598

Query: 472 HTVCIADKGKAVYAFGDG 489
            ++ +   G+ VY +G G
Sbjct: 599 FSMALTTAGE-VYTWGSG 615



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQVSAGRSHSAAWT 83
           H LA++ TG V++WG+    +LG GN   +++P+ +      K I+ + AG  HSAA T
Sbjct: 443 HTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVT 501


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
            [Ornithorhynchus anatinus]
          Length = 4866

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/469 (52%), Positives = 315/469 (67%), Gaps = 26/469 (5%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +P    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP L+  L  
Sbjct: 4288 QQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQG 4347

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  IP  YG L+   +  +RAR
Sbjct: 4348 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDGIPPQYGALKEVSIHTVRAR 4405

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYS---W-LVHPSLRPLFAPRVYTLPLVR 182
            L+LL  FSDL+Y   RLL L   +Q+    + YS   W +V   LRPL APRVYTLP+VR
Sbjct: 4406 LRLLYHFSDLMYSSWRLLNLSPNNQN--STSHYSAGTWGIVQGQLRPLLAPRVYTLPMVR 4463

Query: 183  SVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLL 242
            S+GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+
Sbjct: 4464 SIGKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLV 4522

Query: 243  GEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSL 302
            GEGADDAGGVFDDTITEMC EL +G V L + +PN  A+ GYNRDR++ NP    S + L
Sbjct: 4523 GEGADDAGGVFDDTITEMCQELETGVVDLFIPSPNATAEVGYNRDRFLFNPSAC-SDEHL 4581

Query: 303  MHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIH 362
            M FKFLGIL GVAIRTKKPL L L+P+VWK +   P+T  DLE+ D LY Q+L +I  I 
Sbjct: 4582 MQFKFLGILMGVAIRTKKPLDLHLAPMVWKQLCCIPLTLEDLEEVDLLYVQTLNSILHIE 4641

Query: 363  LSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSA 422
             SG+TE NF E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI        
Sbjct: 4642 DSGITEENFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE------- 4694

Query: 423  VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                    Y     D         M+W +P  +++ L    +E + CG+
Sbjct: 4695 --------YRLHEMDRQVAAVREGMSWIIPVPLLSLLTAKQLEQMVCGM 4735



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVT++G ++TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4144 MSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4203

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4204 LAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4236



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           +       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 VEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P++V  L  V +E V+ G  HT
Sbjct: 4249 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHT 4308

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + I   G  VYA+G    G+LGLG+T
Sbjct: 4309 LAITSTGD-VYAWGSNSEGQLGLGHT 4333



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+ +NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 4037 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4096

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 4097 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 4131



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4169 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN 4228

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4229 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4269



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V+  G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4131 RQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4190

Query: 67   KNIRQVSAGRSHSAA 81
              I QV+ G +H+ A
Sbjct: 4191 YQIGQVACGLNHTLA 4205



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4092 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4151

Query: 80   AAWTA 84
            A  TA
Sbjct: 4152 AVVTA 4156



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4173 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK 4232

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4233 SSPQKVDVLCGIGIKKVACGTQFSVALT 4260



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  +TS G +Y +G+   G+LG G T + + P  +  L   ++  +S G  H+
Sbjct: 4301 VAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHS 4360

Query: 474  V 474
             
Sbjct: 4361 A 4361


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
            gallopavo]
          Length = 4334

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/467 (52%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +P    + I DI+VG EH LA+S+TG V+AWG+NS+ QLGLG+  + REP L+  L  
Sbjct: 3756 QQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQG 3815

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  IP  YG L+   +  +RAR
Sbjct: 3816 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAIPPQYGALKEVSIHTVRAR 3873

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 3874 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 3933

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 3934 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 3992

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 3993 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4051

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+P+VWK +   P+   DLE+ D LY Q+L +I  I  S
Sbjct: 4052 FKFLGILMGVAIRTKKPLDLHLAPMVWKQLCCIPLILEDLEEVDLLYVQTLNSILHIEDS 4111

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE NF E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4112 GITEENFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4162

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4163 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4203



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVT++G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 3612 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 3671

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 3672 VAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSPQ 3704



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
           +I+Q+SAG SHS AWTA P
Sbjct: 719 SIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P++V  L+ V +E ++ G  HT
Sbjct: 3717 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHT 3776

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + ++  G  VYA+G    G+LGLG+T
Sbjct: 3777 LALSSTGD-VYAWGSNSEGQLGLGHT 3801



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3478 GRHGQLAEAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNS 3537

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 3538 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 3596

Query: 504  TPQ 506
             P+
Sbjct: 3597 RPR 3599



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+ +G + + FG+GDYG+LG G 
Sbjct: 3637 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGN 3696

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 3697 STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGH-VYTFG 3737



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V+  G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 3599 RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 3658

Query: 67   KNIRQVSAGRSHSAA 81
              I QV+ G +H+ A
Sbjct: 3659 YQIGQVACGLNHTVA 3673



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 3560 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 3619

Query: 80   AAWTA 84
            A  TA
Sbjct: 3620 AVVTA 3624



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H +AVS  G  V+A+G+    +LGLGN    
Sbjct: 3641 LGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAK 3700

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 3701 SSPQKVDILCGIGIKKVACGTQFSVALT 3728



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
          Length = 4860

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/467 (52%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +P    + I DI+VG EH LA+S+TG V+AWG+NS+ QLGLG+  + REP L+  L  
Sbjct: 4282 QQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQG 4341

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  IP  YG L+   +  +RAR
Sbjct: 4342 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAIPPQYGALKEVSIHTVRAR 4399

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4400 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4459

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4460 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4518

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4519 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4577

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+P+VWK +   P+   DLE+ D LY Q+L +I  I  S
Sbjct: 4578 FKFLGILMGVAIRTKKPLDLHLAPMVWKQLCCIPLILEDLEEVDLLYVQTLNSILHIEDS 4637

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE NF E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4638 GITEENFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4688

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4689 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4729



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVT++G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4138 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4197

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4198 VAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4230



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
           +I+Q+SAG SHS AWTA P
Sbjct: 719 SIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P++V  L+ V +E ++ G  HT
Sbjct: 4243 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHT 4302

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + ++  G  VYA+G    G+LGLG+T
Sbjct: 4303 LALSSTGD-VYAWGSNSEGQLGLGHT 4327



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4004 GRHGQLAEAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4063

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4064 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4122

Query: 504  TPQ 506
             P+
Sbjct: 4123 RPR 4125



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4163 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN 4222

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4223 STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGH-VYTFG 4263



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V+  G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4125 RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4184

Query: 67   KNIRQVSAGRSHSAA 81
              I QV+ G +H+ A
Sbjct: 4185 YQIGQVACGLNHTVA 4199



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 80   AAWTA 84
            A  TA
Sbjct: 4146 AVVTA 4150



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H +AVS  G  V+A+G+    +LGLGN    
Sbjct: 4167 LGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK 4226

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4227 SSPQKVDILCGIGIKKVACGTQFSVALT 4254



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/473 (51%), Positives = 316/473 (66%), Gaps = 23/473 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4281 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4340

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4341 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTVRAR 4398

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4399 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4458

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4459 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4517

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4518 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4576

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4577 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4636

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4637 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4687

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCI 476
                  Y     D         M+W VP  +++ L    +E + CG+   +C+
Sbjct: 4688 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGMPE-ICV 4733



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4137 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4196

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4229



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H L++S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4242 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4302 LALASTGD-VYAWGSNSEGQLGLGHT 4326



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+ +NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 4030 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4089

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 4090 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 4124



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4162 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4221

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4222 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4262



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4124 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4183

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4184 YQIGQVACGLNHTLAVSA 4201



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 80   AAWTA 84
            A  T+
Sbjct: 4145 AVVTS 4149



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4166 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4225

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4226 SSPQKVDVLCGIGIKKVACGTQFSVALT 4253



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/473 (51%), Positives = 316/473 (66%), Gaps = 23/473 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4292 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4351

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4352 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTVRAR 4409

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4410 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4469

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4470 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4528

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4529 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4587

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4588 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4647

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4648 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4698

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCI 476
                  Y     D         M+W VP  +++ L    +E + CG+   +C+
Sbjct: 4699 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGMPE-ICV 4744



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4148 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4207

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4208 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4240



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H L++S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4253 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4312

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4313 LALASTGD-VYAWGSNSEGQLGLGHT 4337



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+ +NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 4041 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4100

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 4101 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 4135



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4173 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4232

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4233 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4273



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4135 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4194

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4195 YQIGQVACGLNHTLAVSA 4212



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4096 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4155

Query: 80   AAWTA 84
            A  T+
Sbjct: 4156 AVVTS 4160



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4177 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4236

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4237 SSPQKVDVLCGIGIKKVACGTQFSVALT 4264



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/491 (50%), Positives = 318/491 (64%), Gaps = 28/491 (5%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +P    IHI D++VG EH L +S+TG V+ WG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4358 QQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQG 4417

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNI Q+SAGR HSAAWTAP +PP  PG   S  L+LGLP  +P  Y  L+   +  +RAR
Sbjct: 4418 KNIHQISAGRCHSAAWTAPSVPPRAPG--SSVPLQLGLPAAVPPQYSGLKELSIEAVRAR 4475

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPY----SW-LVHPSLRPLFAPRVYTLPLV 181
            L+LL  FSDL+Y   RLL L   +Q    CT +    +W +V   LRPL APRVYTLP+V
Sbjct: 4476 LRLLYHFSDLMYSSWRLLNLSPNNQS---CTSHYNAGTWGIVQGQLRPLLAPRVYTLPMV 4532

Query: 182  RSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKL 241
            RS+GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL
Sbjct: 4533 RSIGKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKL 4591

Query: 242  LGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQS 301
            +GEGADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++LNP      + 
Sbjct: 4592 VGEGADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLLNPSACLD-EH 4650

Query: 302  LMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDI 361
            ++ FKFLGIL GVAIRTKKPL L L+PLVWK +   P+   DLE+ D LY Q+L++I  I
Sbjct: 4651 MLQFKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCIPLLLEDLEEVDLLYVQTLKSILHI 4710

Query: 362  HLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHS 421
              SG+TE NF E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI       
Sbjct: 4711 EDSGITEDNFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE------ 4764

Query: 422  AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKG 480
                     Y     D         M+W VP  +++ L    +E + CG+    C   K 
Sbjct: 4765 ---------YRLHEIDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGMPEICCDVLKK 4815

Query: 481  KAVYAFGDGEY 491
               Y   D ++
Sbjct: 4816 VVRYREVDEQH 4826



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 74/93 (79%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVT++G L+TFGNGDYGRLG G T N K+PE+V AL   HV  V+CGLNHT
Sbjct: 4214 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHT 4273

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4274 LVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQ 4306



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA V+ +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 522 CVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 579

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 580 TIALSKDGRTVWSFGGGDNGKLGHGDT 606



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       +VDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V+ L   
Sbjct: 666 IEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGV 725

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 726 AIQQISAGTSHSLAWTALP 744



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y+   +ACG  H+ VV+++G + + FG+GDYG+LG G 
Sbjct: 4239 GRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGN 4298

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   GK V+ FG
Sbjct: 4299 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGK-VFTFG 4339



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  +++
Sbjct: 476 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 535

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 536 DGE-LYTWGEGDFGRLGHGDSNSRNIP 561



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G ++TFG      L  G   N   P++V  L+ +H++ V+ G  HT
Sbjct: 4319 VACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHT 4378

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + ++  G  VY +G    G+LGLG+T
Sbjct: 4379 LVLSSTGD-VYTWGSNSEGQLGLGHT 4403



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+  NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 4107 VVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4166

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 4167 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 4201



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 13/110 (11%)

Query: 402 TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV----- 456
           +FA+  Q  EA   C F    V++S+G +   G G YGRLG G + N    +++      
Sbjct: 408 SFAD-AQTIEAGQYCTF----VISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR 462

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           A+ KV     S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 463 AIKKVSSSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 509



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 44/78 (56%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V+  G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4201 RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEG 4260

Query: 67   KNIRQVSAGRSHSAAWTA 84
             ++ QV+ G +H+   +A
Sbjct: 4261 YHVGQVACGLNHTLVVSA 4278



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ V AL  + +  V  G   
Sbjct: 573 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS 632

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 633 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 663



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4162 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4221

Query: 80   AAWTA 84
            A  TA
Sbjct: 4222 AVVTA 4226



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           + I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 462 RAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 521

Query: 71  QVSAGRSHSAA 81
            VSAG  HSAA
Sbjct: 522 CVSAGYRHSAA 532



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +  H+  ++ G  H L VS  G  V+A+G+    +LGLGN    
Sbjct: 4243 LGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAK 4302

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4303 SSPQKVDVLCGIGIKKVACGTQFSVALT 4330



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AVS  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 520 VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 577

Query: 77  SHSAA 81
           SH+ A
Sbjct: 578 SHTIA 582


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/467 (52%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +P    + I DI+VG EH LA+S+TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4286 QQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4345

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  IP  YG L+   +  +RAR
Sbjct: 4346 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDVIPPQYGALKEVSIQTVRAR 4403

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4404 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4463

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4464 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLIASDLRLPSRAWKVKLVGE 4522

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4523 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4581

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+P+VWK +   P+   DLE+ D LY Q+L +I  I  S
Sbjct: 4582 FKFLGILMGVAIRTKKPLDLHLAPMVWKQLCCIPLILEDLEEVDLLYVQTLNSILHIEDS 4641

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE NF E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4642 GITEENFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4692

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4693 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4733



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVT++G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4142 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4201

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4202 VAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4234



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  +  ++V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--INVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVGGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+ +NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 4035 VVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4094

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 4095 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 4129



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P++V  L  V +E ++ G  HT
Sbjct: 4247 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHT 4306

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + ++  G  VYA+G    G+LGLG+T
Sbjct: 4307 LALSSTGD-VYAWGSNSEGQLGLGHT 4331



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4167 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN 4226

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4227 STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGH-VYTFG 4267



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V+  G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4129 RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4188

Query: 67   KNIRQVSAGRSHSAA 81
              I QV+ G +H+ A
Sbjct: 4189 YQIGQVACGLNHTVA 4203



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4090 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4149

Query: 80   AAWTA 84
            A  TA
Sbjct: 4150 AVVTA 4154



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.1 bits (105), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 14/127 (11%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H +AVS  G  V+A+G+    +LGLGN    
Sbjct: 4171 LGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK 4230

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGH--TPSSSLRLGLPQDIPDHYG 113
              PQ V  L    I++V+ G   S A T         GH  T      +GLP+    ++ 
Sbjct: 4231 SSPQKVDILCGIGIKKVACGTQFSVALT-------KDGHVYTFGQDRLIGLPEGRARNHN 4283

Query: 114  HLQNKPL 120
              Q  PL
Sbjct: 4284 RPQQVPL 4290



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +   N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--INVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/467 (52%), Positives = 313/467 (67%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4280 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4339

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4340 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTVRAR 4397

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4398 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4457

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4458 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4516

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4517 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4575

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4576 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4635

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4636 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4686

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4687 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4727



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4136 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4195

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4196 LAVSSDGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4228



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4241 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4300

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4301 LALASTGD-VYAWGSNSEGQLGLGHT 4325



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4002 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4061

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4062 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4120

Query: 504  TPQ 506
             P+
Sbjct: 4121 RPR 4123



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+S+G + + FG+GDYG+LG G 
Sbjct: 4161 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGN 4220

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4221 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4261



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4123 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4182

Query: 67   KNIRQVSAGRSHSAA 81
              I QV+ G +H+ A
Sbjct: 4183 YQIGQVACGLNHTLA 4197



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4084 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4143

Query: 80   AAWTA 84
            A  T+
Sbjct: 4144 AVVTS 4148



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIRKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS+ G  V+A+G+    +LGLGN    
Sbjct: 4165 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAK 4224

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4225 SSPQKVDVLCGIGIKKVACGTQFSVALT 4252



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/480 (51%), Positives = 318/480 (66%), Gaps = 23/480 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4281 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4340

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG ++   +  +RAR
Sbjct: 4341 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGAVREVSIHTVRAR 4398

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4399 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4458

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4459 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4517

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4518 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4576

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4577 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4636

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4637 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4687

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAV 483
                  Y     D         M+W VP  +++ L    +E + CG+   +C+    K V
Sbjct: 4688 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGMPE-ICVEVLKKVV 4740



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4137 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4196

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4229



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H L++S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4242 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4302 LALASTGD-VYAWGSNSEGQLGLGHT 4326



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+ +NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 4030 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4089

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 4090 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 4124



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4162 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4221

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4222 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4262



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4124 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4183

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4184 YQIGQVACGLNHTLAVSA 4201



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 80   AAWTA 84
            A  T+
Sbjct: 4145 AVVTS 4149



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4166 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4225

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4226 SSPQKVDVLCGIGIKKVACGTQFSVALT 4253



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/467 (52%), Positives = 313/467 (67%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +P    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 2915 QQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 2974

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 2975 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTVRAR 3032

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 3033 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 3092

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 3093 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 3151

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 3152 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 3210

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 3211 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 3270

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 3271 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 3321

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 3322 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTARQLEQMVCGM 3362



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/100 (60%), Positives = 74/100 (74%), Gaps = 7/100 (7%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV-------ESV 466
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +        SV
Sbjct: 2764 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSV 2823

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +CGLNHT+ ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 2824 ACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQ 2863



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 67/110 (60%), Gaps = 5/110 (4%)

Query: 401  LTFANRLQYY---EAAIACGFK-HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
            LT  + LQ +   +   +CG   HS  +T +G ++++G+GDYG+LGHG +   + P ++ 
Sbjct: 2695 LTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 2754

Query: 457  ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            AL    V  +SCG  H+  +   GK ++ FG+G+YG+LGLGNT  K  P+
Sbjct: 2755 ALQGEEVVQMSCGFKHSAVVTSDGK-LFTFGNGDYGRLGLGNTSNKKLPE 2803



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P++V  L  V +E V+ G  HT
Sbjct: 2876 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHT 2935

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 2936 LALASTGD-VYAWGSNSEGQLGLGHT 2960



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 2630 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 2689

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 2690 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 2748

Query: 504  TPQ 506
             P+
Sbjct: 2749 RPR 2751



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 2/76 (2%)

Query: 413  AIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            ++ACG  H+  V+++G + + FG+GDYG+LG G +     P++V  L  + ++ V+CG  
Sbjct: 2822 SVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQ 2881

Query: 472  HTVCIADKGKAVYAFG 487
             +V +   G  VY FG
Sbjct: 2882 FSVALTKDGH-VYTFG 2896



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 2712 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 2771

Query: 80   AAWTA 84
            A  T+
Sbjct: 2772 AVVTS 2776



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 2751 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 2810

Query: 67   KNIRQ-------VSAGRSHSAA 81
              I Q       V+ G +H+ A
Sbjct: 2811 YQIGQAWNKSYSVACGLNHTLA 2832



 Score = 41.6 bits (96), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 20   ISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSH 78
            ++ G  H LAVS  G  V+A+G+    +LGLGN      PQ V  L    I++V+ G   
Sbjct: 2823 VACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 2882

Query: 79   SAAWT 83
            S A T
Sbjct: 2883 SVALT 2887


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/471 (52%), Positives = 317/471 (67%), Gaps = 30/471 (6%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +PA   + I D++VG EH L +S+TG V+AWG+NS+ QLGLG+  + REP L+ AL  
Sbjct: 4268 QQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLISALQG 4327

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNI+Q+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  Y  L+   +  +RAR
Sbjct: 4328 KNIQQISAGRCHSAAWTAPPVPPRAPGS--SVPLQLGLPVCVPPQYSALREVSMEALRAR 4385

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPY----SW-LVHPSLRPLFAPRVYTLPLV 181
            L+LL  FSDL+Y   RLL L   +Q    CT      +W +V   LRPL APRVYTLP+V
Sbjct: 4386 LRLLYHFSDLMYSSWRLLNLSPNNQS---CTSRYNAGTWGIVQGQLRPLLAPRVYTLPMV 4442

Query: 182  RSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKL 241
            RS+GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL
Sbjct: 4443 RSIGKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKL 4501

Query: 242  LGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQS 301
            +GEGADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++LNP  S  L+ 
Sbjct: 4502 VGEGADDAGGVFDDTITEMCQELETGVVDLLIPSPNAAAEVGYNRDRFLLNP--SACLEE 4559

Query: 302  -LMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRD 360
             L+ FKFLGIL GVAIRTKKPL L L+P+VWK +   P++  DLE+ D LY Q+L +I  
Sbjct: 4560 HLLQFKFLGILMGVAIRTKKPLDLHLAPMVWKQLCCIPLSLEDLEEVDLLYVQTLNSILH 4619

Query: 361  IHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKH 420
            +  SG+TE NF E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI      
Sbjct: 4620 LEDSGITEQNFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE----- 4674

Query: 421  SAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                      Y     D         M+W VP  +++ L    +E + CGL
Sbjct: 4675 ----------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTARQLEQMVCGL 4715



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L++FGNGDYGRLG G T N K+PERV AL    V  V+CGLNHT
Sbjct: 4124 MSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHT 4183

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4184 LAVSADGMTVWAFGDGDYGKLGLGNSTAKSSPQ 4216



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA V+ +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 510 CVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 567

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 568 TIALSKDGRTVWSFGGGDNGKLGHGDT 594



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       +VDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V+ L   
Sbjct: 654 IEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGV 713

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 714 AIQQISAGTSHSLAWTALP 732



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   TS G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  +++
Sbjct: 464 HTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 523

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 524 DGE-LYTWGEGDFGRLGHGDSNSRNIP 549



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G +YTFG      L  G   N   P++V AL  V +E V+ G  HT
Sbjct: 4229 VACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHT 4288

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + ++  G  VYA+G    G+LGLG+T
Sbjct: 4289 LTLSSTGD-VYAWGSNSEGQLGLGHT 4313



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+ +NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 4017 VVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSD 4076

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 4077 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 4111



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 414  IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +ACG  H+  V+++G  ++ FG+GDYG+LG G +     P++V  L  + ++ V+CG   
Sbjct: 4176 VACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4235

Query: 473  TVCIADKGKAVYAFG 487
            +V +   G  VY FG
Sbjct: 4236 SVALTKDGN-VYTFG 4249



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++S+G +   G G YGRLG G + N    +++      A+ KV 
Sbjct: 401 QTIEAGQYCTF----VISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVS 456

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 457 SSKGSDG--HTLAFTSEGE-VFSWGDGDYGKLGHGNSSTQKYPK 497



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 46/78 (58%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F++GN    +LGLGN  N + P+ V AL  
Sbjct: 4111 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEG 4170

Query: 67   KNIRQVSAGRSHSAAWTA 84
              + QV+ G +H+ A +A
Sbjct: 4171 HQVGQVACGLNHTLAVSA 4188



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ V AL  + +  V  G   
Sbjct: 561 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS 620

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 621 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 651



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4072 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4131

Query: 80   AAWTA 84
            A  T+
Sbjct: 4132 AVVTS 4136



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           + I  V  S G++ H LA ++ G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 450 RAIKKVSSSKGSDGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 509

Query: 71  QVSAGRSHSAA 81
            VSAG  HSAA
Sbjct: 510 CVSAGYRHSAA 520



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   +  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4153 LGNTSNKKLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAK 4212

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4213 SSPQKVDVLCGIGIKKVACGTQFSVALT 4240



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AVS  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 508 VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 565

Query: 77  SHSAA 81
           SH+ A
Sbjct: 566 SHTIA 570


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/467 (52%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4268 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4327

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 4328 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTARAR 4385

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4386 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4445

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4446 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4504

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4505 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4563

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4564 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4623

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4624 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4674

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4675 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4715



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4124 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4183

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4184 LAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQ 4216



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4229 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4288

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4289 LALASTGD-VYAWGSNSEGQLGLGHT 4313



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3990 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4049

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4050 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4108

Query: 504  TPQ 506
             P+
Sbjct: 4109 RPR 4111



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNG-YLYTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G  ++ FG+GDYG+LG G 
Sbjct: 4149 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN 4208

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4209 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4249



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4111 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4170

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4171 YQIGQVACGLNHTLAVSA 4188



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4072 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4131

Query: 80   AAWTA 84
            A  T+
Sbjct: 4132 AVVTS 4136



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLSLTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQV-FAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G V +A+G+    +LGLGN    
Sbjct: 4153 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK 4212

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4213 SSPQKVDVLCGIGIKKVACGTQFSVALT 4240



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/467 (52%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4275 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4334

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 4335 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTARAR 4392

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4393 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4452

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4453 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4511

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4512 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4570

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4571 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4630

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4631 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4681

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4682 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4722



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4131 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4190

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4191 LAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQ 4223



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4236 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4295

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4296 LALASTGD-VYAWGSNSEGQLGLGHT 4320



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3997 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4056

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4057 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4115

Query: 504  TPQ 506
             P+
Sbjct: 4116 RPR 4118



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNG-YLYTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G  ++ FG+GDYG+LG G 
Sbjct: 4156 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN 4215

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4216 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4256



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4118 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4177

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4178 YQIGQVACGLNHTLAVSA 4195



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4079 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4138

Query: 80   AAWTA 84
            A  T+
Sbjct: 4139 AVVTS 4143



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLSLTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQV-FAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G V +A+G+    +LGLGN    
Sbjct: 4160 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK 4219

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4220 SSPQKVDVLCGIGIKKVACGTQFSVALT 4247



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/467 (52%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4278 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4337

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 4338 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTARAR 4395

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4396 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4455

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4456 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4514

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4515 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4573

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4574 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4633

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4634 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4684

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4685 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4725



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4134 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4193

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4194 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4226



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4239 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4298

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4299 LALASTGD-VYAWGSNSEGQLGLGHT 4323



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4000 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4059

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4060 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4118

Query: 504  TPQ 506
             P+
Sbjct: 4119 RPR 4121



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4159 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4218

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4219 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4259



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4121 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4180

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4181 YQIGQVACGLNHTLAVSA 4198



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4082 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4141

Query: 80   AAWTA 84
            A  T+
Sbjct: 4142 AVVTS 4146



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4163 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4222

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4223 SSPQKVDVLCGIGIKKVACGTQFSVALT 4250



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/467 (52%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4250 QQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4309

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4310 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTVRAR 4367

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4368 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4427

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4428 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4486

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4487 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4545

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4546 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4605

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4606 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4656

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4657 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4697



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4106 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4165

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4166 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4198



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4211 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4270

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4271 LALASNGD-VYAWGSNSEGQLGLGHT 4295



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3972 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4031

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4032 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4090

Query: 504  TPQ 506
             P+
Sbjct: 4091 RPR 4093



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4131 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4190

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4191 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4231



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4093 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4152

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4153 YQIGQVACGLNHTLAVSA 4170



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4054 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4113

Query: 80   AAWTA 84
            A  T+
Sbjct: 4114 AVVTS 4118



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4135 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4194

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4195 SSPQKVDVLCGIGIKKVACGTQFSVALT 4222



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   ++  +S G  H+
Sbjct: 4263 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHS 4322

Query: 474  V 474
             
Sbjct: 4323 A 4323


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/467 (52%), Positives = 310/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4283 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4342

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 4343 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTARAR 4400

Query: 127  LKLLNRFSDLIYQVVRLLPLG-NVDQDWVQCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L  N           +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4401 LRLLYHFSDLMYSSWRLLNLSPNNQSSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4460

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4461 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4519

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4520 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4578

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4579 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4638

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4639 GITEESFHEMIPLDSFIGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4689

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4690 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4730



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4139 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4198

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4231



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G    LA+ +  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4303

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4304 LALASTGD-VYAWGSNSEGQLGLGHT 4328



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4005 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4064

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4123

Query: 504  TPQ 506
             P+
Sbjct: 4124 RPR 4126



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4164 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4224 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4264



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4126 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4186 YQIGQVACGLNHTLAVSA 4203



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 13/113 (11%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-- 456
           + L+F++  Q  EA   C F    V++++G +   G G YGRLG G + N    +++   
Sbjct: 398 MALSFSD-AQTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFE 452

Query: 457 ---ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              ++ KV     S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 453 PHRSIKKVSSSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ V AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 80   AAWTA 84
            A  T+
Sbjct: 4147 AVVTS 4151



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4168 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4227

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4228 SSPQKVDVLCGIGIKKVACGTQFSVALT 4255



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 313/467 (67%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +P    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4282 QQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4341

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4342 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTVRAR 4399

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4400 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4459

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4460 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4518

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4519 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4577

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+P+VWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4578 FKFLGILMGVAIRTKKPLDLHLAPVVWKQLCCIPLTLEDLEEVDLLYVQTLNSILHIEDS 4637

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4638 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4688

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4689 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4729



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4138 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4197

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4198 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4230



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P++V  L  V +E V+ G  HT
Sbjct: 4243 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHT 4302

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4303 LALASTGD-VYAWGSNSEGQLGLGHT 4327



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4004 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4063

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4064 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4122

Query: 504  TPQ 506
             P+
Sbjct: 4123 RPR 4125



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4163 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4222

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4223 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4263



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4125 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4184

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4185 YQIGQVACGLNHTLAVSA 4202



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 80   AAWTA 84
            A  T+
Sbjct: 4146 AVVTS 4150



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4167 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4226

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4227 SSPQKVDVLCGIGIKKVACGTQFSVALT 4254



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/473 (51%), Positives = 316/473 (66%), Gaps = 23/473 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4281 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4340

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4341 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTVRAR 4398

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4399 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4458

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4459 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4517

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ +P      + LM 
Sbjct: 4518 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFSPSACLD-EHLMQ 4576

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4577 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4636

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4637 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4687

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCI 476
                  Y     D         M+W VP  +++ L    +E + CG+   +C+
Sbjct: 4688 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGMPE-ICV 4733



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4137 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4196

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4229



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H L++S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4242 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4302 LALASTGD-VYAWGSNSEGQLGLGHT 4326



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+ +NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 4030 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4089

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 4090 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 4124



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4162 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4221

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4222 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4262



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4124 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4183

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4184 YQIGQVACGLNHTLAVSA 4201



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 80   AAWTA 84
            A  T+
Sbjct: 4145 AVVTS 4149



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4166 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4225

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4226 SSPQKVDVLCGIGIKKVACGTQFSVALT 4253



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/467 (52%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4283 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4342

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 4343 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTARAR 4400

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4401 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4460

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4461 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4519

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4520 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4578

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4579 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4638

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4639 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4689

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4690 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4730



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4139 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4198

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4231



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4303

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4304 LALASTGD-VYAWGSNSEGQLGLGHT 4328



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4005 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4064

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4123

Query: 504  TPQ 506
             P+
Sbjct: 4124 RPR 4126



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4164 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4224 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4264



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4126 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4186 YQIGQVACGLNHTLAVSA 4203



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ V AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 80   AAWTA 84
            A  T+
Sbjct: 4147 AVVTS 4151



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4168 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4227

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4228 SSPQKVDVLCGIGIKKVACGTQFSVALT 4255



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4277 QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4336

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4337 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTVRAR 4394

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4395 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4454

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4455 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4513

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4514 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4572

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4573 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4632

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4633 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4683

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4684 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4724



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4133 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4192

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4193 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4225



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4238 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4297

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4298 LALASNGD-VYAWGSNSEGQLGLGHT 4322



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 4/122 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4004 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4063

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4064 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4122

Query: 504  TP 505
             P
Sbjct: 4123 RP 4124



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4158 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4217

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4218 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4258



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%)

Query: 3    GTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
            G S R     +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V 
Sbjct: 4116 GNSDRQRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVT 4175

Query: 63   ALSNKNIRQVSAGRSHSAAWTA 84
            AL    I QV+ G +H+ A +A
Sbjct: 4176 ALEGYQIGQVACGLNHTLAVSA 4197



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4162 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4221

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4222 SSPQKIDVLCGIGIKKVACGTQFSVALT 4249



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P        + + Q+S G  HS
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX-----QGEEVVQMSCGFKHS 4140

Query: 80   AAWTA 84
            A  T+
Sbjct: 4141 AVVTS 4145



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4290 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4349

Query: 474  V 474
             
Sbjct: 4350 A 4350


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/467 (51%), Positives = 313/467 (67%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +P    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 3810 QQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 3869

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 3870 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTVRAR 3927

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 3928 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 3987

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 3988 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4046

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4047 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4105

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P++  DLE+ D LY Q+L +I  I  S
Sbjct: 4106 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLSLEDLEEVDLLYVQTLNSILHIEDS 4165

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4166 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4216

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4217 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4257



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 69/93 (74%), Gaps = 11/93 (11%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PER           V+CGLNHT
Sbjct: 3677 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER-----------VACGLNHT 3725

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 3726 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 3758



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 513 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 570

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 571 TIALSKDGRTVWSFGGGDNGKLGHGDT 597



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 67/110 (60%), Gaps = 5/110 (4%)

Query: 401  LTFANRLQYY---EAAIACGFK-HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
            LT  + LQ +   +   +CG   HS  +T +G ++++G+GDYG+LGHG +   + P ++ 
Sbjct: 3608 LTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 3667

Query: 457  ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            AL    V  +SCG  H+  +   GK ++ FG+G+YG+LGLGNT  K  P+
Sbjct: 3668 ALQGEEVVQMSCGFKHSAVVTSDGK-LFTFGNGDYGRLGLGNTSNKKLPE 3716



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 657 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 716

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 717 AIQQISAGTSHSLAWTALP 735



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P++V  L  V +E V+ G  HT
Sbjct: 3771 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHT 3830

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 3831 LALASTGD-VYAWGSNSEGQLGLGHT 3855



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 527 DGE-LYTWGEGDFGRLGHGDSNSRNIP 552



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3543 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 3602

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 3603 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 3661

Query: 504  TPQ 506
             P+
Sbjct: 3662 RPR 3664



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 414  IACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +ACG  H+  V+++G + + FG+GDYG+LG G +     P++V  L  + ++ V+CG   
Sbjct: 3718 VACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 3777

Query: 473  TVCIADKGKAVYAFG 487
            +V +   G  VY FG
Sbjct: 3778 SVALTKDGH-VYTFG 3791



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 404 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 459

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 460 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 500



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 564 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 623

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 624 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 654



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 3625 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 3684

Query: 80   AAWTA 84
            A  T+
Sbjct: 3685 AVVTS 3689



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 453 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 512

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 513 CVSAGYRHSAAVT 525



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 32/55 (58%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V
Sbjct: 3664 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 3718



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 511 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 568

Query: 77  SHSAA 81
           SH+ A
Sbjct: 569 SHTIA 573



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 20   ISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSH 78
            ++ G  H LAVS  G  V+A+G+    +LGLGN      PQ V  L    I++V+ G   
Sbjct: 3718 VACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 3777

Query: 79   SAAWT 83
            S A T
Sbjct: 3778 SVALT 3782


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/467 (52%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4281 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4340

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 4341 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTARAR 4398

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4399 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4458

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4459 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4517

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4518 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4576

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4577 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4636

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4637 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4687

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4688 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4728



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4137 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4196

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4229



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4242 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4302 LALASTGD-VYAWGSNSEGQLGLGHT 4326



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4003 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4062

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4063 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4121

Query: 504  TPQ 506
             P+
Sbjct: 4122 RPR 4124



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4162 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4221

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4222 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4262



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4124 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4183

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4184 YQIGQVACGLNHTLAVSA 4201



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 80   AAWTA 84
            A  T+
Sbjct: 4145 AVVTS 4149



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4166 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4225

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4226 SSPQKVDVLCGIGIKKVACGTQFSVALT 4253



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/473 (51%), Positives = 316/473 (66%), Gaps = 23/473 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4281 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4340

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4341 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTVRAR 4398

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4399 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4458

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4459 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4517

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ +P      + LM 
Sbjct: 4518 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFSPSACLD-EHLMQ 4576

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4577 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4636

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4637 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4687

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCI 476
                  Y     D         M+W VP  +++ L    +E + CG+   +C+
Sbjct: 4688 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGMPE-ICV 4733



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4137 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4196

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4229



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H L++S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4242 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4302 LALASTGD-VYAWGSNSEGQLGLGHT 4326



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+ +NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 4030 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4089

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 4090 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 4124



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4162 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4221

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4222 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4262



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4124 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4183

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4184 YQIGQVACGLNHTLAVSA 4201



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144

Query: 80   AAWTA 84
            A  T+
Sbjct: 4145 AVVTS 4149



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4166 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4225

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4226 SSPQKVDVLCGIGIKKVACGTQFSVALT 4253



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4283 QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4342

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4343 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTVRAR 4400

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4401 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4460

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4461 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4519

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4520 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4578

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4579 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4638

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4639 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4689

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4690 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4730



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4139 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4198

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4231



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4303

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4304 LALASNGD-VYAWGSNSEGQLGLGHT 4328



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4005 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4064

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4123

Query: 504  TPQ 506
             P+
Sbjct: 4124 RPR 4126



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4164 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4224 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4264



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4126 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4186 YQIGQVACGLNHTLAVSA 4203



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 80   AAWTA 84
            A  T+
Sbjct: 4147 AVVTS 4151



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.1 bits (105), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4168 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4227

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4228 SSPQKIDVLCGIGIKKVACGTQFSVALT 4255



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4355

Query: 474  V 474
             
Sbjct: 4356 A 4356


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4282 QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4341

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4342 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREISIHTVRAR 4399

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4400 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4459

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4460 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4518

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4519 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4577

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4578 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4637

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4638 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4688

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4689 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4729



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4138 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4197

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4198 LAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQ 4230



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4243 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4302

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4303 LALASNGD-VYAWGSNSEGQLGLGHT 4327



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4004 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4063

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4064 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4122

Query: 504  TPQ 506
             P+
Sbjct: 4123 RPR 4125



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNG-YLYTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G  ++ FG+GDYG+LG G 
Sbjct: 4163 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN 4222

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4223 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4263



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4125 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4184

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4185 YQIGQVACGLNHTLAVSA 4202



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 80   AAWTA 84
            A  T+
Sbjct: 4146 AVVTS 4150



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQV-FAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G V +A+G+    +LGLGN    
Sbjct: 4167 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK 4226

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4227 SSPQKVDVLCGIGIKKVACGTQFSVALT 4254



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4295 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4354

Query: 474  V 474
             
Sbjct: 4355 A 4355


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/473 (51%), Positives = 316/473 (66%), Gaps = 23/473 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 2929 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 2988

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 2989 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTVRAR 3046

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 3047 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 3106

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 3107 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 3165

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ +P      + LM 
Sbjct: 3166 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFSPSACLD-EHLMQ 3224

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 3225 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 3284

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 3285 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 3335

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCI 476
                  Y     D         M+W VP  +++ L    +E + CG+   +C+
Sbjct: 3336 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGMPE-ICV 3381



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 2785 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 2844

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 2845 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 2877



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 2890 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 2949

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 2950 LALASTGD-VYAWGSNSEGQLGLGHT 2974



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+ +NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 2678 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 2737

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 2738 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 2772



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 2810 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 2869

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 2870 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 2910



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 2772 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 2831

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 2832 YQIGQVACGLNHTLAVSA 2849



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 2733 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 2792

Query: 80   AAWTA 84
            A  T+
Sbjct: 2793 AVVTS 2797



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 2814 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 2873

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 2874 SSPQKVDVLCGIGIKKVACGTQFSVALT 2901


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/467 (52%), Positives = 314/467 (67%), Gaps = 21/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4295 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4354

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 4355 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTARAR 4412

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4413 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4472

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4473 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4531

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4532 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4590

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4591 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4650

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4651 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAI---------- 4700

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                 L+         +  G  M+W VP  +++ L    +E + CG+
Sbjct: 4701 --EYRLHEMDRQQVAAVREG--MSWIVPVPLLSLLTAKQLEQMVCGM 4743



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 60/103 (58%), Positives = 74/103 (71%), Gaps = 10/103 (9%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL----------NKVHV 463
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL          N +  
Sbjct: 4141 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFF 4200

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              V+CGLNHT+ ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4201 LQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4243



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 513 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 570

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 571 TIALSKDGRTVWSFGGGDNGKLGHGDT 597



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 67/110 (60%), Gaps = 5/110 (4%)

Query: 401  LTFANRLQYY---EAAIACGFK-HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
            LT  + LQ +   +   +CG   HS  +T +G ++++G+GDYG+LGHG +   + P ++ 
Sbjct: 4072 LTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 4131

Query: 457  ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            AL    V  +SCG  H+  +   GK ++ FG+G+YG+LGLGNT  K  P+
Sbjct: 4132 ALQGEEVVQMSCGFKHSAVVTSDGK-LFTFGNGDYGRLGLGNTSNKKLPE 4180



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 657 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 716

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 717 AIQQISAGTSHSLAWTALP 735



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 527 DGE-LYTWGEGDFGRLGHGDSNSRNIP 552



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4256 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4315

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4316 LALASTGD-VYAWGSNSEGQLGLGHT 4340



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4007 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4066

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4067 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4125

Query: 504  TPQ 506
             P+
Sbjct: 4126 RPR 4128



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 414  IACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +ACG  H+  V+++G + + FG+GDYG+LG G +     P++V  L  + ++ V+CG   
Sbjct: 4203 VACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4262

Query: 473  TVCIADKGKAVYAFG 487
            +V +   G  VY FG
Sbjct: 4263 SVALTKDGH-VYTFG 4276



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 404 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 459

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 460 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 500



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 564 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 623

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 624 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 654



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4089 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4148

Query: 80   AAWTA 84
            A  T+
Sbjct: 4149 AVVTS 4153



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 10/88 (11%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4128 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4187

Query: 67   KNI----------RQVSAGRSHSAAWTA 84
              I           QV+ G +H+ A +A
Sbjct: 4188 YQIGQARNNTLFFLQVACGLNHTLAVSA 4215



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 453 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 512

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 513 CVSAGYRHSAAVT 525



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 511 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 568

Query: 77  SHSAA 81
           SH+ A
Sbjct: 569 SHTIA 573



 Score = 42.0 bits (97), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 3/86 (3%)

Query: 1    MSGTSGRHIPAFKN--IHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINYRE 57
            ++   G  I   +N  +  + ++ G  H LAVS  G  V+A+G+    +LGLGN      
Sbjct: 4182 VTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4241

Query: 58   PQLVLALSNKNIRQVSAGRSHSAAWT 83
            PQ V  L    I++V+ G   S A T
Sbjct: 4242 PQKVDVLCGIGIKKVACGTQFSVALT 4267


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4283 QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4342

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4343 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTVRAR 4400

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4401 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4460

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4461 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4519

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4520 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4578

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4579 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4638

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4639 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4689

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4690 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4730



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4139 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4198

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4231



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4303

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4304 LALASNGD-VYAWGSNSEGQLGLGHT 4328



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4005 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4064

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4123

Query: 504  TPQ 506
             P+
Sbjct: 4124 RPR 4126



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4164 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4224 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4264



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4126 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4186 YQIGQVACGLNHTLAVSA 4203



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 80   AAWTA 84
            A  T+
Sbjct: 4147 AVVTS 4151



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4168 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4227

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4228 SSPQKIDVLCGIGIKKVACGTQFSVALT 4255



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4355

Query: 474  V 474
             
Sbjct: 4356 A 4356


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +P    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4282 QQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4341

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4342 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTVRAR 4399

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4400 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4459

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4460 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4518

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4519 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4577

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4578 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4637

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4638 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4688

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4689 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4729



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4138 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4197

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4198 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4230



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P++V  L  V +E V+ G  HT
Sbjct: 4243 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHT 4302

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4303 LALASNGD-VYAWGSNSEGQLGLGHT 4327



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4004 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4063

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4064 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4122

Query: 504  TPQ 506
             P+
Sbjct: 4123 RPR 4125



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4163 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4222

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4223 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4263



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4125 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4184

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4185 YQIGQVACGLNHTLAVSA 4202



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 80   AAWTA 84
            A  T+
Sbjct: 4146 AVVTS 4150



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4167 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4226

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4227 SSPQKVDVLCGIGIKKVACGTQFSVALT 4254



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4295 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4354

Query: 474  V 474
             
Sbjct: 4355 A 4355


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4283 QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4342

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4343 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTVRAR 4400

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4401 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4460

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4461 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4519

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4520 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4578

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4579 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4638

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4639 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4689

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4690 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4730



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4139 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4198

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4199 LAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4231



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4303

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4304 LALASNGD-VYAWGSNSEGQLGLGHT 4328



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4005 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4064

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4123

Query: 504  TPQ 506
             P+
Sbjct: 4124 RPR 4126



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+ +G + + FG+GDYG+LG G 
Sbjct: 4164 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN 4223

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4224 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4264



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4126 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 67   KNIRQVSAGRSHSAA 81
              I QV+ G +H+ A
Sbjct: 4186 YQIGQVACGLNHTLA 4200



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 80   AAWTA 84
            A  T+
Sbjct: 4147 AVVTS 4151



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4168 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK 4227

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4228 SSPQKIDVLCGIGIKKVACGTQFSVALT 4255



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4355

Query: 474  V 474
             
Sbjct: 4356 A 4356


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4272 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4331

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 4332 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTARAR 4389

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4390 LRLLYHFSDLMYSSWRLLNLSPNNQNSASHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4449

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4450 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4508

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4509 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACID-EHLMQ 4567

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4568 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4627

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4628 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4678

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W +P  +++ L    +E + CG+
Sbjct: 4679 ------YRLHEMDRQVAAVREGMSWIIPVPLLSLLTAKQLEQMVCGM 4719



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4128 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4187

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4188 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4220



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4233 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4292

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4293 LALASTGD-VYAWGSNSEGQLGLGHT 4317



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3994 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4053

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4054 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4112

Query: 504  TPQ 506
             P+
Sbjct: 4113 RPR 4115



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4153 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4212

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4213 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4253



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4115 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4174

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4175 YQIGQVACGLNHTLAVSA 4192



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4076 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4135

Query: 80   AAWTA 84
            A  T+
Sbjct: 4136 AVVTS 4140



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4157 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4216

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4217 SSPQKVDVLCGIGIKKVACGTQFSVALT 4244



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4276 QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4335

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4336 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTVRAR 4393

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4394 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4453

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4454 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4512

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4513 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4571

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4572 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4631

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4632 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4682

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4683 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4723



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4132 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4191

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4192 LAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4224



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4237 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4296

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4297 LALASNGD-VYAWGSNSEGQLGLGHT 4321



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3998 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4057

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4058 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4116

Query: 504  TPQ 506
             P+
Sbjct: 4117 RPR 4119



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+ +G + + FG+GDYG+LG G 
Sbjct: 4157 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN 4216

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4217 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4257



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4119 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4178

Query: 67   KNIRQVSAGRSHSAA 81
              I QV+ G +H+ A
Sbjct: 4179 YQIGQVACGLNHTLA 4193



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4080 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4139

Query: 80   AAWTA 84
            A  T+
Sbjct: 4140 AVVTS 4144



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4161 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK 4220

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4221 SSPQKIDVLCGIGIKKVACGTQFSVALT 4248



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4289 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4348

Query: 474  V 474
             
Sbjct: 4349 A 4349


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4276 QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4335

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4336 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTLPPQYGALREVSIHTVRAR 4393

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4394 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4453

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4454 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4512

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4513 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4571

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4572 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4631

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4632 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4682

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4683 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4723



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4132 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4191

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4192 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4224



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3998 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4057

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4058 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4116

Query: 504  TPQ 506
             P+
Sbjct: 4117 RPR 4119



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  + +E V+ G  HT
Sbjct: 4237 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4296

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4297 LALASNGD-VYAWGSNSEGQLGLGHT 4321



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4157 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4216

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4217 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4257



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4119 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4178

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4179 YQIGQVACGLNHTLAVSA 4196



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4080 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4139

Query: 80   AAWTA 84
            A  T+
Sbjct: 4140 AVVTS 4144



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4161 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4220

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4221 SSPQKIDVLCGIGIKKVACGTQFSVALT 4248



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4289 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4348

Query: 474  V 474
             
Sbjct: 4349 A 4349


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4220 QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4279

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4280 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTVRAR 4337

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4338 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4397

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4398 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4456

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4457 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4515

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4516 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4575

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4576 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4626

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4627 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4667



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4076 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4135

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4136 LAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4168



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4181 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4240

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4241 LALASNGD-VYAWGSNSEGQLGLGHT 4265



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3942 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4001

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4002 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4060

Query: 504  TPQ 506
             P+
Sbjct: 4061 RPR 4063



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+ +G + + FG+GDYG+LG G 
Sbjct: 4101 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN 4160

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4161 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4201



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4063 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4122

Query: 67   KNIRQVSAGRSHSAA 81
              I QV+ G +H+ A
Sbjct: 4123 YQIGQVACGLNHTLA 4137



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4024 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4083

Query: 80   AAWTA 84
            A  T+
Sbjct: 4084 AVVTS 4088



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4105 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK 4164

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4165 SSPQKIDVLCGIGIKKVACGTQFSVALT 4192



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4233 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4292

Query: 474  V 474
             
Sbjct: 4293 A 4293


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4286 QQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4345

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4346 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTVRAR 4403

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4404 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4463

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4464 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4522

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4523 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4581

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4582 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4641

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4642 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4692

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4693 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4733



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4142 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4201

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4202 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4234



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4247 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHT 4306

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4307 LALASNGD-VYAWGSNSEGQLGLGHT 4331



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4008 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4067

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4068 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4126

Query: 504  TPQ 506
             P+
Sbjct: 4127 RPR 4129



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4167 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4226

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4227 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4267



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4129 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4188

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4189 YQIGQVACGLNHTLAVSA 4206



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4090 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4149

Query: 80   AAWTA 84
            A  T+
Sbjct: 4150 AVVTS 4154



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 14/127 (11%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4171 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4230

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGH--TPSSSLRLGLPQDIPDHYG 113
              PQ +  L    I++V+ G   S A T         GH  T      +GLP+    ++ 
Sbjct: 4231 SSPQKIDVLCGIGIKKVACGTQFSVALT-------KDGHVYTFGQDRLIGLPEGRARNHN 4283

Query: 114  HLQNKPL 120
              Q  PL
Sbjct: 4284 RPQQIPL 4290



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4299 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4358

Query: 474  V 474
             
Sbjct: 4359 A 4359


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4246 QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4305

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4306 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTLPPQYGALREVSIHTVRAR 4363

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4364 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4423

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4424 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4482

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4483 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4541

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4542 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4601

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4602 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4652

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4653 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4693



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4102 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4161

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4162 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4194



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3968 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4027

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4028 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4086

Query: 504  TPQ 506
             P+
Sbjct: 4087 RPR 4089



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  + +E V+ G  HT
Sbjct: 4207 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4266

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4267 LALASNGD-VYAWGSNSEGQLGLGHT 4291



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4127 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4186

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4187 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4227



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4089 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4148

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4149 YQIGQVACGLNHTLAVSA 4166



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4050 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4109

Query: 80   AAWTA 84
            A  T+
Sbjct: 4110 AVVTS 4114



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.1 bits (105), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4131 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4190

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4191 SSPQKIDVLCGIGIKKVACGTQFSVALT 4218



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4259 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4318

Query: 474  V 474
             
Sbjct: 4319 A 4319


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4268 QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4327

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4328 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTLPPQYGALREVSIHTVRAR 4385

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4386 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4445

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4446 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4504

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4505 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4563

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4564 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4623

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4624 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4674

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4675 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4715



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4124 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4183

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4184 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4216



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3990 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4049

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4050 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4108

Query: 504  TPQ 506
             P+
Sbjct: 4109 RPR 4111



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  + +E V+ G  HT
Sbjct: 4229 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4288

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4289 LALASNGD-VYAWGSNSEGQLGLGHT 4313



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4149 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4208

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4209 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4249



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4111 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4170

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4171 YQIGQVACGLNHTLAVSA 4188



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4072 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4131

Query: 80   AAWTA 84
            A  T+
Sbjct: 4132 AVVTS 4136



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4153 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4212

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4213 SSPQKIDVLCGIGIKKVACGTQFSVALT 4240



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4281 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4340

Query: 474  V 474
             
Sbjct: 4341 A 4341


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
            harrisii]
          Length = 4865

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP L+  L  
Sbjct: 4287 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQG 4346

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTA P+PP  PG   S  L+LGLP  IP  YG L+   +  +RAR
Sbjct: 4347 KNIRQISAGRCHSAAWTASPVPPRAPG--VSVPLQLGLPDAIPPQYGALKEVSIHTVRAR 4404

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4405 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4464

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4465 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4523

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4524 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNPSAFLD-EHLMQ 4582

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+P+VWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4583 FKFLGILMGVAIRTKKPLDLHLAPMVWKQLCCIPLTLEDLEEVDLLYVQTLNSILHIEDS 4642

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE NF E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4643 GITEENFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4693

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W +P  +++ L    +E + CG+
Sbjct: 4694 ------YRLHEMDRQVAAVREGMSWIIPVPLLSLLTAKQLEQMVCGM 4734



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4143 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4202

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4203 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4235



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA V+ +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  +++
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4248 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4307

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4308 LALASTGD-VYAWGSNSEGQLGLGHT 4332



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4009 GRHGQLAEAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4068

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4069 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4127

Query: 504  TPQ 506
             P+
Sbjct: 4128 RPR 4130



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4168 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4227

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4228 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4268



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   ++ +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4130 RQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4189

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4190 YQIGQVACGLNHTLAVSA 4207



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4091 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHS 4150

Query: 80   AAWTA 84
            A  T+
Sbjct: 4151 AVVTS 4155



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAA 81
            VSAG  HSAA
Sbjct: 515 CVSAGYRHSAA 525



 Score = 45.4 bits (106), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4172 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4231

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4232 SSPQKVDVLCGIGIKKVACGTQFSVALT 4259



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AVS  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
            domestica]
          Length = 4790

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I DI+VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP L+  L  
Sbjct: 4212 QQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITILQG 4271

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTA P+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4272 KNIRQISAGRCHSAAWTASPVPPRAPG--VSVPLQLGLPDTVPPQYGALKEVSIHTVRAR 4329

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4330 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4389

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4390 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4448

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4449 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNPSAFLD-EHLMQ 4507

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+P+VWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4508 FKFLGILMGVAIRTKKPLDLHLAPMVWKQLCCIPLTLEDLEEVDLLYVQTLNSILHIEDS 4567

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE NF E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4568 GITEENFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4618

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W +P  +++ L    +E + CG+
Sbjct: 4619 ------YRLHEMDRQVAAVREGMSWIIPVPLLSLLTAKQLEQMVCGM 4659



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4068 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4127

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4128 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4160



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3934 GRHGQLAEAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 3993

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 3994 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4052

Query: 504  TPQ 506
             P+
Sbjct: 4053 RPR 4055



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E ++ G  HT
Sbjct: 4173 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHT 4232

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4233 LALASTGD-VYAWGSNSEGQLGLGHT 4257



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4093 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4152

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4153 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4193



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   ++ +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4055 RQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4114

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4115 YQIGQVACGLNHTLAVSA 4132



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4016 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHS 4075

Query: 80   AAWTA 84
            A  T+
Sbjct: 4076 AVVTS 4080



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.1 bits (105), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4097 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4156

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4157 SSPQKVDVLCGIGIKKVACGTQFSVALT 4184



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/467 (52%), Positives = 314/467 (67%), Gaps = 21/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4283 QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4342

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4343 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTLPPQYGALREVSIHTVRAR 4400

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4401 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4460

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4461 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4519

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4520 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4578

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4579 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4638

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4639 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAI---------- 4688

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                 L+         +  G  M+W VP  +++ L    +E + CG+
Sbjct: 4689 --EYRLHEMDRQQVAAVREG--MSWIVPVPLLSLLTAKQLEQMVCGM 4731



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4139 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4198

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4231



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4005 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4064

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4123

Query: 504  TPQ 506
             P+
Sbjct: 4124 RPR 4126



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  + +E V+ G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4303

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4304 LALASNGD-VYAWGSNSEGQLGLGHT 4328



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4164 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4224 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4264



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4126 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4186 YQIGQVACGLNHTLAVSA 4203



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 80   AAWTA 84
            A  T+
Sbjct: 4147 AVVTS 4151



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4168 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4227

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4228 SSPQKIDVLCGIGIKKVACGTQFSVALT 4255



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   ++  +S G  H+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCHS 4355

Query: 474  V 474
             
Sbjct: 4356 A 4356


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4275 QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4334

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4335 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTLPPQYGALREVSIHTVRAR 4392

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4393 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4452

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4453 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4511

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4512 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4570

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4571 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4630

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4631 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4681

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4682 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4722



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4131 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4190

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4191 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4223



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3997 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4056

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4057 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4115

Query: 504  TPQ 506
             P+
Sbjct: 4116 RPR 4118



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  + +E V+ G  HT
Sbjct: 4236 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4295

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4296 LALASNGD-VYAWGSNSEGQLGLGHT 4320



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4156 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4215

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4216 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4256



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4118 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4177

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4178 YQIGQVACGLNHTLAVSA 4195



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4079 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4138

Query: 80   AAWTA 84
            A  T+
Sbjct: 4139 AVVTS 4143



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4160 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4219

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4220 SSPQKIDVLCGIGIKKVACGTQFSVALT 4247



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4288 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4347

Query: 474  V 474
             
Sbjct: 4348 A 4348


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4283 QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4342

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4343 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTLPPQYGALREVSIHTVRAR 4400

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4401 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4460

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4461 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4519

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4520 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4578

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4579 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4638

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4639 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4689

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4690 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4730



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4139 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4198

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4231



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4005 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4064

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4123

Query: 504  TPQ 506
             P+
Sbjct: 4124 RPR 4126



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  + +E V+ G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4303

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4304 LALASNGD-VYAWGSNSEGQLGLGHT 4328



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4164 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4224 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4264



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4126 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4186 YQIGQVACGLNHTLAVSA 4203



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 80   AAWTA 84
            A  T+
Sbjct: 4147 AVVTS 4151



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4168 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4227

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4228 SSPQKIDVLCGIGIKKVACGTQFSVALT 4255



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4355

Query: 474  V 474
             
Sbjct: 4356 A 4356


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 2736 QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 2795

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 2796 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTLPPQYGALREVSIHTVRAR 2853

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 2854 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 2913

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 2914 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 2972

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 2973 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 3031

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 3032 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 3091

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 3092 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 3142

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 3143 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 3183



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 2592 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 2651

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 2652 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 2684



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 2458 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 2517

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 2518 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 2576

Query: 504  TPQ 506
             P+
Sbjct: 2577 RPR 2579



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  + +E V+ G  HT
Sbjct: 2697 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 2756

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 2757 LALASNGD-VYAWGSNSEGQLGLGHT 2781



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 2617 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 2676

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 2677 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 2717



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 2579 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 2638

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 2639 YQIGQVACGLNHTLAVSA 2656



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 2540 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 2599

Query: 80   AAWTA 84
            A  T+
Sbjct: 2600 AVVTS 2604



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 2621 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 2680

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 2681 SSPQKIDVLCGIGIKKVACGTQFSVALT 2708



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 2749 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 2808

Query: 474  V 474
             
Sbjct: 2809 A 2809


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/467 (52%), Positives = 314/467 (67%), Gaps = 21/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4283 QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4342

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 4343 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTLPPQYGALREVSIHTVRAR 4400

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4401 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4460

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4461 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4519

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4520 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4578

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4579 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4638

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4639 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAI---------- 4688

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                 L+         +  G  M+W VP  +++ L    +E + CG+
Sbjct: 4689 --EYRLHEMDRQQVAAVREG--MSWIVPVPLLSLLTAKQLEQMVCGM 4731



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4139 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4198

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4231



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4005 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4064

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4123

Query: 504  TPQ 506
             P+
Sbjct: 4124 RPR 4126



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  + +E V+ G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4303

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4304 LALASNGD-VYAWGSNSEGQLGLGHT 4328



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4164 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4224 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4264



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4126 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4186 YQIGQVACGLNHTLAVSA 4203



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 80   AAWTA 84
            A  T+
Sbjct: 4147 AVVTS 4151



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4168 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4227

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 4228 SSPQKIDVLCGIGIKKVACGTQFSVALT 4255



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   ++  +S G  H+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCHS 4355

Query: 474  V 474
             
Sbjct: 4356 A 4356


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 1863 QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 1922

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 1923 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTVRAR 1980

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 1981 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 2040

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 2041 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 2099

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 2100 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 2158

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 2159 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 2218

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 2219 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 2269

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 2270 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 2310



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 1719 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 1778

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 1779 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 1811



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 1824 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 1883

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 1884 LALASNGD-VYAWGSNSEGQLGLGHT 1908



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 1585 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 1644

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 1645 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 1703

Query: 504  TPQ 506
             P+
Sbjct: 1704 RPR 1706



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 1744 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 1803

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 1804 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 1844



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 1706 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 1765

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 1766 YQIGQVACGLNHTLAVSA 1783



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 1667 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 1726

Query: 80   AAWTA 84
            A  T+
Sbjct: 1727 AVVTS 1731



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 1748 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 1807

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 1808 SSPQKIDVLCGIGIKKVACGTQFSVALT 1835



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 1876 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 1935

Query: 474  V 474
             
Sbjct: 1936 A 1936


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP +V  L  
Sbjct: 3924 QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTGLQG 3983

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 3984 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTVRAR 4041

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4042 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4101

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4102 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4160

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4161 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4219

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4220 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4279

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4280 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4330

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4331 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4371



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 3780 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 3839

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 3840 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 3872



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 3885 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 3944

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 3945 LALASNGD-VYAWGSNSEGQLGLGHT 3969



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3646 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 3705

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 3706 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 3764

Query: 504  TPQ 506
             P+
Sbjct: 3765 RPR 3767



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 3805 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 3864

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 3865 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 3905



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 3767 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 3826

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 3827 YQIGQVACGLNHTLAVSA 3844



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 3728 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 3787

Query: 80   AAWTA 84
            A  T+
Sbjct: 3788 AVVTS 3792



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 3809 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 3868

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ +  L    I++V+ G   S A T
Sbjct: 3869 SSPQKIDVLCGIGIKKVACGTQFSVALT 3896



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 3937 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTGLQGKNVRQISAGRCHS 3996

Query: 474  V 474
             
Sbjct: 3997 A 3997


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 237/408 (58%), Positives = 295/408 (72%), Gaps = 6/408 (1%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +P    I I DI+VG EH LA+S +G+V+AWG+NS+ QLGLG+  + REP LV AL  KN
Sbjct: 4266 VPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTLVTALQGKN 4325

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLK 128
            IRQ+SAGR HSAAWTA P+PP  PG   +  L+LGLP  IP  Y  L++  L  +RARL+
Sbjct: 4326 IRQISAGRCHSAAWTAAPVPPRAPG--VAVPLQLGLPDVIPPQYSCLKDICLHTVRARLR 4383

Query: 129  LLNRFSDLIYQVVRLLPLG-NVDQDWVQCTPYSW-LVHPSLRPLFAPRVYTLPLVRSVGK 186
            LL  FSDL+Y   RLL L  N           +W +V   LRPL APRVYTLP+VRS+GK
Sbjct: 4384 LLYHFSDLMYSSWRLLNLSPNNQSSASHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSIGK 4443

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGA 246
            TM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GEGA
Sbjct: 4444 TMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGEGA 4502

Query: 247  DDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFK 306
            DDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++LNP  S   + LM FK
Sbjct: 4503 DDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLLNPS-SGLDEHLMQFK 4561

Query: 307  FLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGV 366
            FLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  SG+
Sbjct: 4562 FLGILMGVAIRTKKPLDLHLAPLVWKQLCCIPLTLEDLEEVDLLYVQTLNSILHIEDSGI 4621

Query: 367  TEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            TE NF E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y + AI
Sbjct: 4622 TEENFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVDRAI 4669



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 75/93 (80%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVT++G L+TFGNGDYGRLG G T N K+PERV AL  +H+  V+CGLNHT
Sbjct: 4120 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHT 4179

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4180 LAVSADGSLVWAFGDGDYGKLGLGNSTAKSSPQ 4212



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+ +NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 4013 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4072

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 4073 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 4107



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 414  IACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +ACG  H+  V+++G L + FG+GDYG+LG G +     P++V  L  + ++ V+CG   
Sbjct: 4172 VACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4231

Query: 473  TVCIADKGKAVYAFG 487
            +V +   G  VY FG
Sbjct: 4232 SVALTKDGH-VYTFG 4245



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+ V  L  + ++ ++ G  HT
Sbjct: 4225 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHT 4284

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + ++  G+ VYA+G    G+LGLG+T
Sbjct: 4285 LALSASGE-VYAWGSNSEGQLGLGHT 4309



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V+  G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4107 RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4166

Query: 67   KNIRQVSAGRSHSAAWTA 84
             +I QV+ G +H+ A +A
Sbjct: 4167 LHIGQVACGLNHTLAVSA 4184



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4068 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4127

Query: 80   AAWTA 84
            A  TA
Sbjct: 4128 AVVTA 4132



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ V AL  +    V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A + +HI  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4149 LGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAK 4208

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4209 SSPQKVDVLCGIGIKKVACGTQFSVALT 4236



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/480 (51%), Positives = 318/480 (66%), Gaps = 23/480 (4%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 438 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 497

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
           KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG ++   +  +RAR
Sbjct: 498 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGAVREVSIHTVRAR 555

Query: 127 LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
           L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 556 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 615

Query: 185 GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
           GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 616 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 674

Query: 245 GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
           GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 675 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 733

Query: 305 FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
           FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 734 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 793

Query: 365 GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
           G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 794 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 844

Query: 425 TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAV 483
                 Y     D         M+W VP  +++ L    +E + CG+   +C+    K V
Sbjct: 845 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGMPE-ICVEVLKKVV 897



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 294 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 353

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 354 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 386



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 399 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 458

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + +A  G  VYA+G    G+LGLG+T
Sbjct: 459 LALASTGD-VYAWGSNSEGQLGLGHT 483



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
           + CG   + V+ +NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 187 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 246

Query: 472 -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 247 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 281



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
           GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 319 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 378

Query: 446 TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 379 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 419



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 281 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 340

Query: 67  KNIRQVSAGRSHSAAWTA 84
             I QV+ G +H+ A +A
Sbjct: 341 YQIGQVACGLNHTLAVSA 358



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21  SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 242 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 301

Query: 80  AAWTA 84
           A  T+
Sbjct: 302 AVVTS 306



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
           +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 323 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 382

Query: 56  REPQLVLALSNKNIRQVSAGRSHSAAWT 83
             PQ V  L    I++V+ G   S A T
Sbjct: 383 SSPQKVDVLCGIGIKKVACGTQFSVALT 410


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/467 (52%), Positives = 310/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4282 QQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4341

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 4342 KNIRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTARAR 4399

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4400 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4459

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4460 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4518

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4519 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4577

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 4578 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4637

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4638 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4688

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L     E + CG+
Sbjct: 4689 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQXEQMVCGM 4729



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4138 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4197

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4198 LAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4230



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           +       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 VEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4243 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4302

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4303 LALASNGD-VYAWGSNSEGQLGLGHT 4327



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4004 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4063

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4064 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4122

Query: 504  TPQ 506
             P+
Sbjct: 4123 RPR 4125



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4163 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN 4222

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4223 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4263



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4125 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4184

Query: 67   KNIRQVSAGRSHSAA 81
              I QV+ G +H+ A
Sbjct: 4185 YQIGQVACGLNHTLA 4199



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4086 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4145

Query: 80   AAWTA 84
            A  T+
Sbjct: 4146 AVVTS 4150



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4167 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK 4226

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4227 SSPQKVDVLCGIGIKKVACGTQFSVALT 4254



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   ++  +S G  H+
Sbjct: 4295 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHS 4354

Query: 474  V 474
             
Sbjct: 4355 A 4355


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/467 (51%), Positives = 309/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4283 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4342

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 4343 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTARAR 4400

Query: 127  LKLLNRFSDLIYQVVRLLPLG-NVDQDWVQCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L  N           +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4401 LRLLYHFSDLMYSSWRLLNLSPNNQSSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4460

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4461 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4519

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4520 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4578

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+P+VWK +   P+   DLE+ D LY Q+L +I  I  S
Sbjct: 4579 FKFLGILMGVAIRTKKPLDLHLAPVVWKQLCCVPLALEDLEEVDLLYVQTLNSILHIEDS 4638

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4639 GITEGSFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4689

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4690 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4730



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4139 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4198

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4231



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4303

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4304 LALASTGD-VYAWGSNSEGQLGLGHT 4328



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4005 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4064

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4123

Query: 504  TPQ 506
             P+
Sbjct: 4124 RPR 4126



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4164 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4224 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4264



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4126 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4186 YQIGQVACGLNHTLAVSA 4203



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ V AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146

Query: 80   AAWTA 84
            A  T+
Sbjct: 4147 AVVTS 4151



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4168 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4227

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4228 SSPQKVDVLCGIGIKKVACGTQFSVALT 4255



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/467 (51%), Positives = 311/467 (66%), Gaps = 21/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4292 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4351

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 4352 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTARAR 4409

Query: 127  LKLLNRFSDLIYQVVRLLPLG-NVDQDWVQCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L  N           +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4410 LRLLYHFSDLMYSSWRLLNLSPNNQSSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4469

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4470 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4528

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4529 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4587

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+P+VWK +   P+   DLE+ D LY Q+L +I  I  S
Sbjct: 4588 FKFLGILMGVAIRTKKPLDLHLAPVVWKQLCCVPLALEDLEEVDLLYVQTLNSILHIEDS 4647

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4648 GITEGSFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAI---------- 4697

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                 L+         +  G  M+W VP  +++ L    +E + CG+
Sbjct: 4698 --EYRLHEMDRQQVAAVREG--MSWIVPVPLLSLLTAKQLEQMVCGM 4740



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4148 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4207

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4208 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4240



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 4253 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4312

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 4313 LALASTGD-VYAWGSNSEGQLGLGHT 4337



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 4014 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4073

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4074 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4132

Query: 504  TPQ 506
             P+
Sbjct: 4133 RPR 4135



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 4173 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4232

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4233 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4273



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4135 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4194

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 4195 YQIGQVACGLNHTLAVSA 4212



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ V AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4096 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4155

Query: 80   AAWTA 84
            A  T+
Sbjct: 4156 AVVTS 4160



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 4177 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4236

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4237 SSPQKVDVLCGIGIKKVACGTQFSVALT 4264



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/410 (56%), Positives = 295/410 (71%), Gaps = 6/410 (1%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + IP    + I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 1894 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 1953

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 1954 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTARAR 2011

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 2012 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 2071

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 2072 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 2130

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 2131 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 2189

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 2190 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 2249

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI
Sbjct: 2250 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAI 2299



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 1750 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 1809

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 1810 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 1842



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 1855 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 1914

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +A  G  VYA+G    G+LGLG+T
Sbjct: 1915 LALASTGD-VYAWGSNSEGQLGLGHT 1939



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 1616 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 1675

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 1676 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 1734

Query: 504  TPQ 506
             P+
Sbjct: 1735 RPR 1737



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+  V+++G + + FG+GDYG+LG G 
Sbjct: 1775 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 1834

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 1835 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 1875



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 1737 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 1796

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I QV+ G +H+ A +A
Sbjct: 1797 YQIGQVACGLNHTLAVSA 1814



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 1698 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 1757

Query: 80   AAWTA 84
            A  T+
Sbjct: 1758 AVVTS 1762



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I  ++ G  H LAVS  G  V+A+G+    +LGLGN    
Sbjct: 1779 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 1838

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 1839 SSPQKVDVLCGIGIKKVACGTQFSVALT 1866


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/467 (50%), Positives = 311/467 (66%), Gaps = 22/467 (4%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +P    + I D++VG EH LA+++TG ++AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 4278 QQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4337

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RAR
Sbjct: 4338 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDAVPPQYGALREVSIHTARAR 4395

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4396 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4455

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4456 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4514

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 4515 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4573

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKFLGIL GVAIRTKKPL L L+PLVWK +   P+   DLE+ D LY Q+L +I  +  S
Sbjct: 4574 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLALEDLEEVDLLYVQTLHSILHLEDS 4633

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
            G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 4634 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4684

Query: 425  TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                  Y     D         M+W +P  +++ L    +E + CG+
Sbjct: 4685 ------YRLHEMDRQVAAVREGMSWIIPVPLLSLLTAKQLEQMVCGM 4725



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 9/102 (8%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL---------NKVHVE 464
            ++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL         NK  + 
Sbjct: 4125 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIIC 4184

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            SV+CGLNHT+ ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4185 SVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4226



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 67/110 (60%), Gaps = 5/110 (4%)

Query: 401  LTFANRLQYY---EAAIACGFK-HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
            LT  + LQ +   +   +CG   HS  +T +G ++++G+GDYG+LGHG +   + P ++ 
Sbjct: 4056 LTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 4115

Query: 457  ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            AL    V  +SCG  H+  +   GK ++ FG+G+YG+LGLGNT  K  P+
Sbjct: 4116 ALQGEEVVQMSCGFKHSAVVTSDGK-LFTFGNGDYGRLGLGNTSNKKLPE 4164



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+QVSAG SHS AWTA P
Sbjct: 719 AIQQVSAGTSHSLAWTALP 737



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
            GR   +   G++V +  A         + CG   + V+ +NG +   G G YGRLG G +
Sbjct: 3991 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4050

Query: 447  MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             +  V   + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+  + 
Sbjct: 4051 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4109

Query: 504  TPQ 506
             P+
Sbjct: 4110 RPR 4112



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 2/77 (2%)

Query: 412  AAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
             ++ACG  H+  V+++G + + FG+GDYG+LG G +     P++V  L  + ++ V+CG 
Sbjct: 4184 CSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGT 4243

Query: 471  NHTVCIADKGKAVYAFG 487
              +V +   G+ VY FG
Sbjct: 4244 QFSVALTKDGQ-VYTFG 4259



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G +YTFG      L  G   N   P++V  L  V +E V+ G  HT
Sbjct: 4239 VACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHT 4298

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +   G  +YA+G    G+LGLG+T
Sbjct: 4299 LALTSTGD-IYAWGSNSEGQLGLGHT 4323



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4073 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4132

Query: 80   AAWTA 84
            A  T+
Sbjct: 4133 AVVTS 4137



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 9/87 (10%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V++ G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4112 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4171

Query: 67   KNIRQ---------VSAGRSHSAAWTA 84
              I Q         V+ G +H+ A +A
Sbjct: 4172 YQIGQARNKSIICSVACGLNHTLAVSA 4198



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLSLTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 1    MSGTSGRHIPAFKNIHIV-DISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINYREP 58
            ++   G  I   +N  I+  ++ G  H LAVS  G  V+A+G+    +LGLGN      P
Sbjct: 4166 VTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSP 4225

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
            Q V  L    I++V+ G   S A T
Sbjct: 4226 QKVDVLCGIGIKKVACGTQFSVALT 4250



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|26454854|gb|AAH40929.1| HERC1 protein, partial [Homo sapiens]
          Length = 651

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + IP    + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+  + REP LV  L  
Sbjct: 73  QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 132

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
           KN+RQ+SAGR HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +  +RAR
Sbjct: 133 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTVRAR 190

Query: 127 LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
           L+LL  FSDL+Y   RLL L   +Q+        +W +V   LRPL APRVYTLP+VRS+
Sbjct: 191 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 250

Query: 185 GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
           GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 251 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 309

Query: 245 GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
           GADDAGGVFDDTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM 
Sbjct: 310 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 368

Query: 305 FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
           FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  S
Sbjct: 369 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 428

Query: 365 GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
           G+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI          
Sbjct: 429 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 479

Query: 425 TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                 Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 480 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 520



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG + S  +T +G++YTFG      L  G   N   P+++  L  V +E V+ G  HT
Sbjct: 34  VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 93

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + +A  G  VYA+G    G+LGLG+T
Sbjct: 94  LALASNGD-VYAWGSNSEGQLGLGHT 118



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 433 FGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           FG+GDYG+LG G +     P+++  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 1   FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 54



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 33/60 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G +H+  + SNG +Y +G+   G+LG G T + + P  V  L   +V  +S G  H+
Sbjct: 86  VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 145


>gi|355694453|gb|AER99674.1| hect domain and RCC1 -like domain 1 [Mustela putorius furo]
          Length = 574

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/457 (52%), Positives = 306/457 (66%), Gaps = 22/457 (4%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I D++VG EH LA+++TG V+AWG+NS+ QLGLG+  + REP LV  L  KN+RQ+SAGR
Sbjct: 7   IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 66

Query: 77  SHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSDL 136
            HSAAWTAPP+PP  PG   S  L+LGLP  +P  YG L+   +   RARL+LL  FSDL
Sbjct: 67  CHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTARARLRLLYHFSDL 124

Query: 137 IYQVVRLLPLG-NVDQDWVQCTPYSW-LVHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNF 194
           +Y   RLL L  N           +W +V   LRPL APRVYTLP+VRS+GKTM+ GKN+
Sbjct: 125 MYSSWRLLNLSPNNQSSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSIGKTMVQGKNY 184

Query: 195 GPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFD 254
           GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GEGADDAGGVFD
Sbjct: 185 GPQITVKRISTRGRKC-KPIFVQIARQVVKLNASDLRLPSRAWKVKLVGEGADDAGGVFD 243

Query: 255 DTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGV 314
           DTITEMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM FKFLGIL GV
Sbjct: 244 DTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQFKFLGILMGV 302

Query: 315 AIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI 374
           AIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  SG+TE +F E+
Sbjct: 303 AIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDSGITEDSFHEM 362

Query: 375 IPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFG 434
           IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI                Y   
Sbjct: 363 IPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE---------------YRLH 407

Query: 435 NGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
             D         M+W VP  +++ L    +E + CG+
Sbjct: 408 EMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 444


>gi|390358768|ref|XP_796864.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Strongylocentrotus purpuratus]
          Length = 4631

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/413 (57%), Positives = 300/413 (72%), Gaps = 10/413 (2%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A     + DI+VG+EH +A+++TG V+ WG+NSD QLGLG+    REP LV +L  
Sbjct: 4053 QQVLALAGFFVEDIAVGSEHTVALTSTGDVWGWGSNSDGQLGLGHFNTVREPVLVGSLQG 4112

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNI+Q++AGRSHSAAWTAPP+P  +PG    + L+LGLP  IP  Y  L++     +RAR
Sbjct: 4113 KNIQQIAAGRSHSAAWTAPPVPRCSPGS--PAPLQLGLPDHIPTQYTALKDCSPGSVRAR 4170

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPY----SWLVHPSLRPLFAPRVYTLPLVR 182
            L+LL+ FSDL+Y   RLL L       +   PY    S L+  SLRPL APRVYTLP+VR
Sbjct: 4171 LRLLHHFSDLMYSSWRLLNLDPAQH--ITLGPYGAGISGLMDGSLRPLLAPRVYTLPMVR 4228

Query: 183  SVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLL 242
            ++G+TM+ GKN+GP VTV+RL T+ ++  KPIF QI++QVV++K +DLRLP+RAWKVKL+
Sbjct: 4229 AIGRTMVQGKNYGPQVTVKRLATRGRK-CKPIFVQIAKQVVRLKPADLRLPARAWKVKLV 4287

Query: 243  GEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSL 302
            GEGADDAGGVFDDTITEMC EL SG V LL+ TPN V++ G NRDR++LNP  + S + L
Sbjct: 4288 GEGADDAGGVFDDTITEMCQELESGTVGLLIPTPNAVSENGSNRDRFLLNPS-AGSEEQL 4346

Query: 303  MHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIH 362
              FKFLGILFGVAIRTKKPL L L+PLVWK +V  P+T  DLE+ D L  Q+LR I DI 
Sbjct: 4347 SLFKFLGILFGVAIRTKKPLDLHLAPLVWKQLVGIPLTTQDLEEVDFLNVQNLRNISDID 4406

Query: 363  LSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIA 415
             SGV E NF E+IPLE FEG S  GR  PIV GG S+PLTF+NR +Y E A+A
Sbjct: 4407 KSGVNEDNFHEVIPLERFEGQSADGRFVPIVPGGWSIPLTFSNRKEYVERALA 4459



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 12/172 (6%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV---SAGR 76
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ V AL  + I QV   +AGR
Sbjct: 3778 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQVEALQGEEISQVRCIAAGR 3837

Query: 77   SHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSDL 136
            SHSAAWTAPP+P  +PG    + L+LGLP  IP  Y  L++     +RARL+LL+ FSDL
Sbjct: 3838 SHSAAWTAPPVPRCSPGS--PAPLQLGLPDHIPTQYTALKDCSPGSVRARLRLLHHFSDL 3895

Query: 137  IYQVVRLLPLGNVDQDWVQCTPY----SWLVHPSLRPLFAPRVYTLPLVRSV 184
            +Y   RLL L       +   PY    S L+  SLRPL APRVYTLP+VR++
Sbjct: 3896 MYSSWRLLNLDPAQH--ITLGPYGAGISGLMDGSLRPLLAPRVYTLPMVRAI 3945



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 1/54 (1%)

Query: 453  ERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            E VVAL +  V  VSCG+NHT+C++  G  V+AFGDG+YGKLGLGN+  K  PQ
Sbjct: 3949 EPVVALGQ-SVGQVSCGMNHTLCVSADGTIVWAFGDGDYGKLGLGNSTAKSYPQ 4001



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 14/117 (11%)

Query: 391  PIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGTTMNW 449
            P+V  GQSV              ++CG  H+  V+++G + + FG+GDYG+LG G +   
Sbjct: 3950 PVVALGQSV------------GQVSCGMNHTLCVSADGTIVWAFGDGDYGKLGLGNSTAK 3997

Query: 450  KVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              P+R+ +L  + ++ V CG  ++V +   G+ V+ FG      L      L   PQ
Sbjct: 3998 SYPQRIESLCNIGIKKVCCGTQYSVALTKDGR-VFTFGQDRLTGLSENRARLANRPQ 4053



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNKNIRQVSAG 75
           IVDI+ G  H LA+++  +V+ WGNN+  Q G G+  +     + V +L    I Q+SAG
Sbjct: 184 IVDIACGDSHCLALTHDNEVYGWGNNAMGQCGQGHTTSPITRVKKVASLEGVTIHQISAG 243

Query: 76  RSHSAAWTAPP 86
            SHS AWTA P
Sbjct: 244 TSHSVAWTALP 254



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+ SNG +   G G YGRLG G + +      + AL    V  +  SCG +
Sbjct: 3723 VICGQNCTFVIHSNGTVSACGEGSYGRLGQGNSDDLHTLTVISALQGFVVTQLVTSCGSD 3782

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 3783 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 3817



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG ++S  +T +G ++TFG      L          P++V+AL    VE ++ G  HT
Sbjct: 4014 VCCGTQYSVALTKDGRVFTFGQDRLTGLSENRARLANRPQQVLALAGFFVEDIAVGSEHT 4073

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
            V +   G  V+ +G    G+LGLG+
Sbjct: 4074 VALTSTGD-VWGWGSNSDGQLGLGH 4097



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 401  LTFANRLQYY---EAAIACGFK-HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
            LT  + LQ +   +   +CG   HS  +T +G ++++G+GDYG+LGHG +   + P +V 
Sbjct: 3761 LTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQVE 3820

Query: 457  ALNKVHVESVSC 468
            AL    +  V C
Sbjct: 3821 ALQGEEISQVRC 3832



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 20   ISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSH 78
            +S G  H L VS  G  V+A+G+    +LGLGN      PQ + +L N  I++V  G  +
Sbjct: 3961 VSCGMNHTLCVSADGTIVWAFGDGDYGKLGLGNSTAKSYPQRIESLCNIGIKKVCCGTQY 4020

Query: 79   SAAWT 83
            S A T
Sbjct: 4021 SVALT 4025



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESVSCGLNH 472
           IACG  H   +T +  +Y +GN   G+ G G TT      ++V +L  V +  +S G +H
Sbjct: 187 IACGDSHCLALTHDNEVYGWGNNAMGQCGQGHTTSPITRVKKVASLEGVTIHQISAGTSH 246

Query: 473 TV 474
           +V
Sbjct: 247 SV 248


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/479 (49%), Positives = 309/479 (64%), Gaps = 35/479 (7%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +PA   + + DI+VG EH LA+S +G V+AWG+NS+ QLGLG+  + REP LV +L  
Sbjct: 4374 QQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVREPTLVTSLQG 4433

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K++RQ+SAGR HSAAW++PP+PP  PG   S  L+LGLP  +P  +G L+      +RAR
Sbjct: 4434 KSVRQISAGRCHSAAWSSPPVPPRAPG--VSVPLQLGLPDAVPPQFGALKEVSPHTVRAR 4491

Query: 127  LKLLNRFSDLIYQVVRLLPLG-NVDQDWVQCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
            L+LL  FSDL+Y   RLL L  N           +W +V   LRPL APRVYTLP+VRS+
Sbjct: 4492 LRLLYHFSDLMYSSWRLLNLSPNNQSSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4551

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GE
Sbjct: 4552 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4610

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTG---YNRD--------RYILNP 293
            GADDAGGVFDDTITEMC EL +G V LL+ +PN  A TG   + R         R++ NP
Sbjct: 4611 GADDAGGVFDDTITEMCQELETGVVDLLIPSPNASAGTGNCSHRRGSLPPSLPGRFLFNP 4670

Query: 294  DLSESLQS-LMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYA 352
              S  L+  L+ FKFLG+L GVA+RTKKPL L L+PLVWK +   P+   DLE+ D LY 
Sbjct: 4671 --SAFLEEHLLQFKFLGVLMGVAVRTKKPLDLHLAPLVWKQLCCIPLALEDLEEVDLLYV 4728

Query: 353  QSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEA 412
            Q+L +I  I   G+TE NF E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E 
Sbjct: 4729 QTLNSILHIEDGGITEENFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVER 4788

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
            AI                Y     D         M+W VP  +++ L    +E + CG+
Sbjct: 4789 AIE---------------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTARQLEQMVCGM 4832



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 73/93 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVT++G L+TFGNGDYGRLG G T N K+PERV AL    +  V+CGLNHT
Sbjct: 4230 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHT 4289

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 4290 LVVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4322



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 517 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 574

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 575 TIALSKDGRTVWSFGGGDNGKLGHGDT 601



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 661 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV 720

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 721 AIQQISAGTSHSLAWTALP 739



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G++YTFG      L  G   N   P++V AL+ V VE ++ G  HT
Sbjct: 4335 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHT 4394

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + ++  G  VYA+G    G+LGLG+T
Sbjct: 4395 LALSASGD-VYAWGSNSEGQLGLGHT 4419



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
            GR+    T  + +P   A    Y    +ACG  H+ VV+++G + + FG+GDYG+LG G 
Sbjct: 4255 GRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGN 4314

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +     P++V  L  + ++ V+CG   +V +   G  VY FG
Sbjct: 4315 STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGH-VYTFG 4355



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 471 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 531 DGE-LYTWGEGDFGRLGHGDSNSRNIP 556



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+ +NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 4123 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4182

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 4183 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 4217



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 408 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 463

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 464 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 504



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 41/73 (56%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   +V +S G +H   V+  G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 4217 RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEG 4276

Query: 67   KNIRQVSAGRSHS 79
              I +V+ G +H+
Sbjct: 4277 YQIGEVACGLNHT 4289



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 568 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 627

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 628 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 658



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 4178 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4237

Query: 80   AAWTA 84
            A  TA
Sbjct: 4238 AVVTA 4242



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 457 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 516

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 517 CVSAGYRHSAAVT 529



 Score = 45.1 bits (105), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + +P    A +   I +++ G  H L VS  G  V+A+G+    +LGLGN    
Sbjct: 4259 LGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAK 4318

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    I++V+ G   S A T
Sbjct: 4319 SSPQKVDILCGIGIKKVACGTQFSVALT 4346



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 515 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 572

Query: 77  SHSAA 81
           SH+ A
Sbjct: 573 SHTIA 577


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/406 (52%), Positives = 283/406 (69%), Gaps = 11/406 (2%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL-SNKNIRQVSAG 75
            I ++ VG+EH LA+++ G V+ WG N+D QLGLG+    REPQL+  L S++ I+Q+SAG
Sbjct: 1287 IEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLGGLGSSEPIKQISAG 1346

Query: 76   RSHSAAWT---APPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNR 132
            R+HSAAW+   A  +   T     ++SL+LG P  +P  Y  L+   +   R RL++L++
Sbjct: 1347 RTHSAAWSGAKAASVRSGTAAAASAASLQLGTPACVPAQYAALKECSVVACRERLRVLHQ 1406

Query: 133  FSDLIYQVVRLL---PLGNVDQD-WVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGKTM 188
            FSD+IY   RLL   PL +   D W+ C   + +V   LRPL APRVYTLPLVR++G+TM
Sbjct: 1407 FSDIIYSSWRLLNLSPLSDQTHDSWLDCRREA-IVQGRLRPLLAPRVYTLPLVRAIGRTM 1465

Query: 189  LVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADD 248
            + G+N+GP + V+RL T+ K+  KP+F QIS QVV++K +DLRLP+RAWKVKL+GEGADD
Sbjct: 1466 VQGRNYGPQIRVKRLATRGKK-CKPLFVQISHQVVRLKAADLRLPARAWKVKLIGEGADD 1524

Query: 249  AGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFL 308
            AGGVFDDTITEMC EL SG + LL+ TPN   D GYNRDR++ NP L ++  S+  FKFL
Sbjct: 1525 AGGVFDDTITEMCHELNSGVLNLLIPTPNTTNDIGYNRDRFLFNPSLKDA-DSMEMFKFL 1583

Query: 309  GILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTE 368
            GIL GVA+RTKKPL L L+P+VWK +     T  DL++ D LY Q+L++I +IH SGVTE
Sbjct: 1584 GILLGVAMRTKKPLDLRLAPMVWKQLAGMIATQEDLQEVDALYVQNLKSICNIHESGVTE 1643

Query: 369  ANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
              F E+IPLE F   S TG+  PI+ GG S+ LTF NR +Y   A+
Sbjct: 1644 QTFAELIPLETFHTQSATGQYVPILPGGHSIALTFCNRQEYSRRAL 1689



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/92 (68%), Positives = 70/92 (76%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            IACGFKHSAVVT +G L TFGNGDYGRLG GT  N K PERV AL   H+  V+CGLNHT
Sbjct: 1133 IACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNHT 1192

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            VC++  G   +AFGDG+YGKLGLGNT  K TP
Sbjct: 1193 VCVSADGSTTWAFGDGDYGKLGLGNTSAKSTP 1224



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 32/199 (16%)

Query: 315  AIRTKKPLPLPLS---PLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANF 371
            A+ T +PLP   S    L W           D++ +  + A S++   D  + G  +A  
Sbjct: 947  ALSTGRPLPFASSYKDDLKW-----------DVQKDAAIIAWSVQHPDDWQMGGSCDAYL 995

Query: 372  PEIIPLECFEGASWTG-RITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL 430
                         W G R   +   G+SV              I CG   + V+ +NG +
Sbjct: 996  -------------WGGGRHGQLCEAGRSVLTPLHTSSFSSAQQIICGQNCTFVIQANGTV 1042

Query: 431  YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL---NHTVCIADKGKAVYAFG 487
               G G YGRLG G + +      V AL    V  +   +    H++ + + G+ V+++G
Sbjct: 1043 LACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGE-VFSWG 1101

Query: 488  DGEYGKLGLGNTGLKPTPQ 506
            DG+YGKLG GN+  +  P+
Sbjct: 1102 DGDYGKLGHGNSDRQRRPR 1120



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 409  YYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
            Y+   +ACG  H+  V+++G   + FG+GDYG+LG G T     P ++ AL+ + V+ V+
Sbjct: 1180 YHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVA 1239

Query: 468  CGLNHTVCIADKG 480
            CG   +V +   G
Sbjct: 1240 CGTQFSVALTRDG 1252



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            SVG++ H LA++ +G+VF+WG+    +LG GN    R P+ + AL  + + Q++ G  HS
Sbjct: 1081 SVGSDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHS 1140

Query: 80   AAWT 83
            A  T
Sbjct: 1141 AVVT 1144



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   ++ I+ G +H   V+  G++  +GN    +LGLG   N + P+ V AL N
Sbjct: 1120 RQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALEN 1179

Query: 67   KNIRQVSAGRSHSAAWTA 84
             +I  V+ G +H+   +A
Sbjct: 1180 YHIGHVACGLNHTVCVSA 1197



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            T  +S P+            +ACG + S  +T +G++ T+G                 P+
Sbjct: 1218 TSAKSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIGQTEAQMRGHCTPQ 1277

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    +E V  G  HT+ +   G  V+ +G    G+LGLG+TG    PQ
Sbjct: 1278 KVTTLAGHFIEEVVVGSEHTLALTSDGN-VWGWGLNADGQLGLGHTGTVREPQ 1329



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQV-FAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
            + A +N HI  ++ G  H + VS  G   +A+G+    +LGLGN      P  + ALS  
Sbjct: 1174 VKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGL 1233

Query: 68   NIRQVSAGRSHSAAWT 83
             +++V+ G   S A T
Sbjct: 1234 KVKKVACGTQFSVALT 1249


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/410 (48%), Positives = 271/410 (66%), Gaps = 14/410 (3%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            + A  + HI+DISVG EH +A+++ G V+ WG+N+D QLGLG+  + +EP LV +LS KN
Sbjct: 1038 VTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESLSGKN 1097

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLK 128
            IRQ+SAGR+HSAAW+          H  +    LG P+ IP  Y  L +  +   R RL 
Sbjct: 1098 IRQISAGRTHSAAWSCE--------HDDAGHTLLGTPESIPSQYDLLADVSVLDARGRLV 1149

Query: 129  LLNRFSDLIYQVVRLLPLGNVDQDWVQCTPY----SWLVHPSLRPLFAPRVYTLPLVRSV 184
            +L++FSDLI     LL            TPY    S     ++R +  PRV +LPLVR++
Sbjct: 1150 VLSKFSDLISASWPLLNYQQKQHSTSDVTPYTCGNSCFSSSAIRSILLPRVLSLPLVRAL 1209

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            GKTM+ GKN+GP +TVRRL  + K+   PIF QI++Q++K    DLRLP+RAWKVKL+GE
Sbjct: 1210 GKTMVQGKNYGPQITVRRLAIRGKK-CSPIFIQIAQQILKQNPCDLRLPARAWKVKLIGE 1268

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITE+C EL +G V LL+ TPN   + G + D ++ NP L+    + M 
Sbjct: 1269 GADDAGGVFDDTITEICQELENGTVNLLIPTPNSTTEAGQHGDSFVFNPSLTSPEDAQM- 1327

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            FKF GIL GVAIRTKKPL L L+P+VWKL+    V+  D+ED+D ++ Q L A+++I ++
Sbjct: 1328 FKFFGILIGVAIRTKKPLDLHLAPIVWKLLAGISVSLQDVEDSDEMFVQMLHALKNIDVA 1387

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            GV E+NF EIIPLE F+  SW G+  P+V GG  +PLTF NR +Y + A+
Sbjct: 1388 GVDESNFNEIIPLESFKAQSWNGKFVPVVVGGDGIPLTFRNRKEYSDQAL 1437



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/92 (60%), Positives = 70/92 (76%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACGFKHSAVVT +G L+TFG GDYGRLGHG+T N K+PERV+AL    +  V+CGLNHT
Sbjct: 892 VACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYIIGQVACGLNHT 951

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           V ++     V+A GDG+YGKLG+G T  K +P
Sbjct: 952 VIVSQDNLTVWACGDGDYGKLGIGGTSAKTSP 983



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 5/102 (4%)

Query: 409 YYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           ++EA  + CG   + ++ +NG + + G G YGRLG G + +      + AL    V+ ++
Sbjct: 779 FHEARKVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLA 838

Query: 468 CGL---NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
                  H + + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 839 TSTGSDGHAIALTENGE-VFSWGDGDYGKLGHGNSDRQRRPR 879



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 6/120 (5%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVT-SNGYLYTFGNGDYGRLGHGT 445
            GR+    T  + +P        Y    +ACG  H+ +V+  N  ++  G+GDYG+LG G 
Sbjct: 917  GRLGHGSTTNKKIPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGG 976

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            T     P ++  L++V ++ +SCG   T  +   GK ++ FG         GN   + +P
Sbjct: 977  TSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGK-LFMFGQDRM----CGNCETRTSP 1031



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 8   HIPAFKNIHIVDISVGTE---HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           HI A +   +  ++  T    H +A++  G+VF+WG+    +LG GN    R P+ + AL
Sbjct: 825 HISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL 884

Query: 65  SNKNIRQVSAGRSHSAAWT 83
             + + QV+ G  HSA  T
Sbjct: 885 RGQEVVQVACGFKHSAVVT 903



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I+CG + +A +T +G L+ FG           T     P+ V AL+  H+  +S G  HT
Sbjct: 997  ISCGAQFTAALTWDGKLFMFGQDRMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHT 1056

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + +  KG  VY +G    G+LGLG+T     P
Sbjct: 1057 IALTSKG-IVYTWGSNTDGQLGLGHTNHVQEP 1087



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 36/60 (60%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I+ G +H+  +TS G +YT+G+   G+LG G T + + P  V +L+  ++  +S G  H+
Sbjct: 1049 ISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQISAGRTHS 1108


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4647

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/410 (50%), Positives = 276/410 (67%), Gaps = 11/410 (2%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            IPA + + I DI+VG EH+LA+SNTG V+AWG N +AQLGLG+    +EP LV  L  KN
Sbjct: 4072 IPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQGKN 4131

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLK 128
            IRQ+SAGR HS+AWT P L     G    S ++LGLPQ +P  Y  L++    ++  RL+
Sbjct: 4132 IRQISAGRCHSSAWTTPALSTRASG---CSGIQLGLPQSVPPQYNALKDCSPEVLNTRLR 4188

Query: 129  LLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYS----WLVHPSLRPLFAPRVYTLPLVRSV 184
            +L  FSDL+Y+  RLL L    Q  V  + YS     +V   LR L +P+V TLPLVR++
Sbjct: 4189 VLYHFSDLMYKSWRLLNLDPRSQ--VSTSRYSSGTAAIVQGQLRGLLSPKVNTLPLVRTI 4246

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            G+TM  GK +GP +TV+R++T+ + + KPIF QI++QVV +  ++LRLPSRAWKVKL+GE
Sbjct: 4247 GRTMTQGKTYGPQITVKRISTRGRSS-KPIFVQIAKQVVNLNPTELRLPSRAWKVKLVGE 4305

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL SG V LL+ TPN  AD G N DR++LNP  + S   ++ 
Sbjct: 4306 GADDAGGVFDDTITEMCQELQSGVVDLLIHTPNSTADVGSNTDRFLLNPG-AFSDDHIVQ 4364

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            F+FLGIL  VAIRTKKPL L L+P VWK +   P+   DLE+ D L  +SL+ I  +  S
Sbjct: 4365 FRFLGILMAVAIRTKKPLDLHLAPWVWKQMCCIPLGAADLEEVDLLTYRSLQGILHLDSS 4424

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             + E NF  +IPL+ F   S  G + P++ GG ++PLTF+NR  Y E A+
Sbjct: 4425 VINEENFTVMIPLDSFVAHSADGTLVPVIPGGHNLPLTFSNRNDYVERAL 4474



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 60/87 (68%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT++G LYT+G GD+GRLGH  + +  VP  V  ++ V    V+CG +H
Sbjct: 513 CVSAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSHSRNVPTLVKDISGVG--QVACGSSH 570

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ +A  G+ V++FG G+ GKLG G+T
Sbjct: 571 TIAVAQDGRIVWSFGGGDNGKLGHGDT 597



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 30/115 (26%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH----------- 462
            +ACGFKHSAVVT++G L+TFG+GD GRLG  +T N  +PERV AL+  H           
Sbjct: 4002 LACGFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDA 4061

Query: 463  ------------------VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
                              +E ++ G  H + +++ G  VYA+G     +LGLG++
Sbjct: 4062 MLKNHNRPQIIPALEGVFIEDIAVGCEHILALSNTGD-VYAWGCNCEAQLGLGHS 4115



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALS 65
           R I       I+DIS G  H LA+S+  +VFAWGNN+  Q G G+      +P+ V+ L 
Sbjct: 655 RLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTSTPVTKPKKVIGLE 714

Query: 66  NKNIRQVSAGRSHSAAWTAPP 86
             +I+Q++AG SHS AWTA P
Sbjct: 715 GVSIQQITAGTSHSLAWTAVP 735



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 1/87 (1%)

Query: 420  HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
            HS  +T  G ++++G+GDYG+LGHG +   + P+++  L    V  ++CG  H+  +   
Sbjct: 3956 HSLALTETGEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTAD 4015

Query: 480  GKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            GK ++ FG G+ G+LG  +T  K  P+
Sbjct: 4016 GK-LFTFGSGDSGRLGQRSTSNKMIPE 4041



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H+  VT+ G ++++G+GDYG+LGHG +   K P+ +    L KV V  VS G  H+  + 
Sbjct: 467 HTLAVTAEGEVFSWGDGDYGKLGHGNSATQKYPKIIQGPLLGKV-VVCVSAGYRHSAAVT 525

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + G+ +Y +G+G++G+LG  ++  +  P
Sbjct: 526 NDGE-LYTWGEGDFGRLGHSDSHSRNVP 552



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F     V+++G +   G G YGRLG G + N  +P+++V      + KV 
Sbjct: 404 QMIEAGQYCTFS----VSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVS 459

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+ +  +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 460 SSKGSDG--HTLAVTAEGE-VFSWGDGDYGKLGHGNSATQKYPK 500



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + +V +NG +   G G YGRLG G + +   P  + AL    V  +  S G +
Sbjct: 3895 VVCGQNCTFLVQANGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSD 3954

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 3955 GHSLALTETGE-VFSWGDGDYGKLGHGNSERQRRPK 3989



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+  V  +G + ++FG GD G+LGHG T     P+ + AL+   +  V  G   
Sbjct: 564 VACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQS 623

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ V+A+G G    LG G+   T L+P
Sbjct: 624 SLALTSAGQ-VFAWGCGSC--LGCGSSETTSLRP 654



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query: 26   HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
            H LA++ TG+VF+WG+    +LG GN    R P+ +  L  + + Q++ G  HSA  TA
Sbjct: 3956 HSLALTETGEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTA 4014



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           + +  V  S G++ H LAV+  G+VF+WG+    +LG GN    + P+++   L  K + 
Sbjct: 453 RTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVV 512

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 513 CVSAGYRHSAAVT 525



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A     I  +  G++  LA+++ GQVFAWG  S    G     + R P+L+  LS   
Sbjct: 606 IEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLR-PRLIEELSITK 664

Query: 69  IRQVSAGRSHSAA 81
           I  +S G SH  A
Sbjct: 665 IIDISCGDSHCLA 677



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+N G+++ WG     +LG  +  +   P LV  +S   + QV+ G 
Sbjct: 511 VVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSHSRNVPTLVKDIS--GVGQVACGS 568

Query: 77  SHSAA 81
           SH+ A
Sbjct: 569 SHTIA 573


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/411 (50%), Positives = 281/411 (68%), Gaps = 13/411 (3%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +P+ + + I DI+VG EHVLA+S+TG V+AWG NS+ QLGLG+    +EP L+ AL  KN
Sbjct: 3308 VPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLITALQGKN 3367

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLK 128
            I+Q+SAGR HS+AWT P    ++ G     +L+LGLPQ +P  Y  L++    ++  RL+
Sbjct: 3368 IKQISAGRCHSSAWTTPSTSKNSGG---PGNLQLGLPQSVPPQYNTLKDCSPRVLSMRLR 3424

Query: 129  LLNRFSDLIYQVVRLLPLGNVD-QDWVQCTPYS----WLVHPSLRPLFAPRVYTLPLVRS 183
            +L  FSDL+Y+  RLL   N+D Q  +  + YS     ++   LR L +P+V TLPLVR 
Sbjct: 3425 VLYNFSDLMYKSWRLL---NLDPQSPLSTSRYSSGTAAIIRGDLRGLLSPKVNTLPLVRC 3481

Query: 184  VGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLG 243
            +G+TM  GK  GP +TV+R++T+ + + KPIF QI++QVV +   +LRLPSRAWKVKL+G
Sbjct: 3482 IGRTMTQGKTHGPQITVKRISTRGRSS-KPIFVQIAKQVVSLNPLELRLPSRAWKVKLVG 3540

Query: 244  EGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLM 303
            EGADDAGGVFDDTITEMC EL SGAV LL+ TPNG AD G N DR++LNP  + S   ++
Sbjct: 3541 EGADDAGGVFDDTITEMCQELQSGAVDLLIHTPNGFADVGSNTDRFLLNP-AAFSEDHMI 3599

Query: 304  HFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHL 363
             F+FLGIL  VAIRT+KPL L L+P VWK +   P+   D+E+ D L  ++L+ I  +  
Sbjct: 3600 QFRFLGILMAVAIRTRKPLDLHLAPWVWKQLCSIPLGGADIEEVDLLTYRTLQGILHLEN 3659

Query: 364  SGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            SG+TE NF  +IPL+ F   S  GR+ P+V GGQ++ LTFANR  Y E  +
Sbjct: 3660 SGITEDNFHVMIPLDSFMVHSADGRLVPVVPGGQNIALTFANRTDYVERGL 3710



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 71/93 (76%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACGF+HSAVVT++G L+TFG+G+ GRLG  +T N  +PERV AL   HV  VSCGLNHT
Sbjct: 3162 LACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHT 3221

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G AV+AFGDG+YGKLG G++  K  PQ
Sbjct: 3222 LVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQ 3254



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           + + G++HSA VT +G LYT+G GD+GRLGH  + +  +P  V  ++ V    V+CG +H
Sbjct: 524 SASAGYRHSAAVTKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVG--QVACGSSH 581

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ +A  G+ V++FG G+ GKLG G+T
Sbjct: 582 TIAVAQDGRTVWSFGGGDNGKLGHGDT 608



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALS 65
           R +       I+DIS G  H LA+S+  +V+AWGNN+  Q G G+       P+ VL L 
Sbjct: 666 RFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLE 725

Query: 66  NKNIRQVSAGRSHSAAWTAPP 86
             +I+Q++AG SHS AWTA P
Sbjct: 726 GVSIQQITAGTSHSLAWTAVP 746



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 4/122 (3%)

Query: 382  GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGY-LYTFGNGDYGR 440
            G+  +GR+    T  + +P   A    Y+   ++CG  H+ V++ +G  ++ FG+GDYG+
Sbjct: 3182 GSGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGK 3241

Query: 441  LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
            LG G++     P++V  L    ++ V CG   +V +A  G  VY FG      +GL ++ 
Sbjct: 3242 LGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGH-VYTFGQERL--IGLPDSM 3298

Query: 501  LK 502
            LK
Sbjct: 3299 LK 3300



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   S ++ SNG +   G G YGRLG G + +  VP  + A     V  +  SCG +
Sbjct: 3055 VVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSD 3114

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG++GKLG GN   +  P+
Sbjct: 3115 GHSMALTETGE-VFSWGDGDFGKLGHGNNERQRRPK 3149



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 8/102 (7%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           Q  EA   C F     V+++G +   G G YGRLG G + N  +P+++V     +++ VS
Sbjct: 415 QTIEAGQYCTFS----VSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVS 470

Query: 468 CGLN---HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
                  HT+ I   G+ V+++GDGEYGKLG GN+  +  P+
Sbjct: 471 SSKGSDGHTLAITVDGE-VFSWGDGEYGKLGHGNSATQKYPK 511



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 54/88 (61%), Gaps = 4/88 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H+  +T +G ++++G+G+YG+LGHG +   K P+ +     +K+ V S S G  H+  + 
Sbjct: 478 HTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKI-VVSASAGYRHSAAVT 536

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             G+ +Y +G+G++G+LG  ++  +  P
Sbjct: 537 KDGE-LYTWGEGDFGRLGHSDSQSRNMP 563



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 3/79 (3%)

Query: 9    IPAFKNIHIVDI--SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
            I AF+   +  +  S G++ H +A++ TG+VF+WG+    +LG GN    R P+ + AL 
Sbjct: 3096 ISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQ 3155

Query: 66   NKNIRQVSAGRSHSAAWTA 84
             +++ Q++ G  HSA  TA
Sbjct: 3156 GEDVVQLACGFRHSAVVTA 3174



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S VV  +G++YTFG      L      N   P+ V +L  + +E ++ G  H 
Sbjct: 3267 VCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHV 3326

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
            + ++  G  VYA+G    G+LGLG+
Sbjct: 3327 LALSSTGD-VYAWGCNSEGQLGLGH 3350



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+  V  +G  +++FG GD G+LGHG T     P+ + AL+   +  V  G   
Sbjct: 575 VACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQS 634

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ V+A+G G    LG G+   T L+P
Sbjct: 635 SLALTSAGQ-VFAWGCGSC--LGCGSSETTSLRP 665



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 430  LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
            +Y +GNG YG+L  GT  N  VP    +L++   + V CG N +  I   G  V A G+G
Sbjct: 3022 VYLWGNGRYGQLA-GTGTNLTVPTLAPSLSQ--TQQVVCGQNCSFLIQSNG-VVTAVGEG 3077

Query: 490  EYGKLGLGNT 499
            +YG+LG GN+
Sbjct: 3078 QYGRLGQGNS 3087



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           +NI  V  S G++ H LA++  G+VF+WG+    +LG GN    + P+++   L +K + 
Sbjct: 464 RNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVV 523

Query: 71  QVSAGRSHSAAWT 83
             SAG  HSAA T
Sbjct: 524 SASAGYRHSAAVT 536



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A     I  +  G++  LA+++ GQVFAWG  S    G     + R P+ V  LS   
Sbjct: 617 IEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLR-PRFVEDLSITK 675

Query: 69  IRQVSAGRSHSAA 81
           I  +S G SH  A
Sbjct: 676 IIDISCGDSHCLA 688



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 38/73 (52%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + I A +   +V ++ G  H   V+  G++F +G+    +LG  +  N   P+ V AL  
Sbjct: 3149 KQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEG 3208

Query: 67   KNIRQVSAGRSHS 79
             ++ QVS G +H+
Sbjct: 3209 YHVGQVSCGLNHT 3221



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINYREPQLVLALS 65
              + A +  H+  +S G  H L +S  G  V+A+G+    +LG G+      PQ V  L 
Sbjct: 3201 ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLC 3260

Query: 66   NKNIRQVSAGRSHS 79
            NK +++V  G   S
Sbjct: 3261 NKGMKKVCCGAQFS 3274



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +  G + S  +TS G ++ +G G     G   T + + P  V  L+   +  +SCG +H 
Sbjct: 628 VCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLR-PRFVEDLSITKIIDISCGDSHC 686

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++ + + VYA+G+   G+ G G+T
Sbjct: 687 LALSHENE-VYAWGNNTMGQCGQGHT 711



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           P F  I +V  S G  H  AV+  G+++ WG     +LG  +  +   P LV  +S   +
Sbjct: 516 PLFSKI-VVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDIS--GV 572

Query: 70  RQVSAGRSHSAA 81
            QV+ G SH+ A
Sbjct: 573 GQVACGSSHTIA 584



 Score = 38.5 bits (88), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESVSCGLNH 472
           I+CG  H   ++    +Y +GN   G+ G G T+     P++V+ L  V ++ ++ G +H
Sbjct: 679 ISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSH 738

Query: 473 TV 474
           ++
Sbjct: 739 SL 740


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 313/591 (52%), Gaps = 124/591 (20%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +PA   +H+ D++VG EH LA+S+TG V+AWG+NS+ QLGLG+  + REP +V  L  
Sbjct: 1449 QQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQG 1508

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K+I QVSAGR HSAAWTAP LPP  PG   S  L+LGLP  +P  Y  L+   +  +RAR
Sbjct: 1509 KHIHQVSAGRCHSAAWTAPSLPPRAPGS--SVPLQLGLPVAVPPQYSCLKEVSVEALRAR 1566

Query: 127  LKLLNRFSDLIYQVVRLLPLG-----------------NVDQD---------WVQCTPY- 159
            L+LL  FSDL+Y   RLL L                  N  Q             CT + 
Sbjct: 1567 LRLLYHFSDLMYSSWRLLNLSPNNQVGRRGPQRPRFSRNASQRRDPSFSCMCLQSCTSHY 1626

Query: 160  ---SW-LVHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTV---- 211
               +W +V   LRPL APRVYTLP+VRS+GKTM+ GKN+GP +TV+R++T+S+  V    
Sbjct: 1627 NAGTWGIVQGQLRPLLAPRVYTLPMVRSIGKTMVQGKNYGPQITVKRISTRSEGDVGAAA 1686

Query: 212  ---------------------KPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAG 250
                                 KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GEGADDAG
Sbjct: 1687 RFGPVPADDAAAAALRRGRKCKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGEGADDAG 1746

Query: 251  GVFDDTITEMCGELLSGAVPLLVRTPNG-----VADTGYNRD------------------ 287
            GVFDDTITEMC   L      L + P+G      A  G  R                   
Sbjct: 1747 GVFDDTITEMCQVRLRRLPRALKQRPSGGRALVFAGAGDGRGGPAHPLPQRHGRGGLQPG 1806

Query: 288  --------------------------RYILNPDLSESLQSLMHFKFLGILFGVAIRTKKP 321
                                      R++LNP      + ++ FKFLGIL GVAIRTKKP
Sbjct: 1807 QVRPASGQGRPSVPPVFTPPPSAGAFRFLLNPSACLD-EHMLQFKFLGILMGVAIRTKKP 1865

Query: 322  LPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFE 381
            L L L+PLVWK +   P+   DLE+ D LY Q+L++I  I  SG+TE NF E+IPL+ F 
Sbjct: 1866 LDLHLAPLVWKQLCCIPLQLEDLEEVDLLYVQTLKSILHIEDSGITEDNFHEMIPLDSFV 1925

Query: 382  GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
            G S  G++ PI+ GG S+PL+F+NR +Y E AI                Y     D    
Sbjct: 1926 GQSADGKMVPIIPGGNSIPLSFSNRKEYVERAIE---------------YRLHEIDRQVA 1970

Query: 442  GHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEY 491
                 M+W VP  +++ L    +E + CG+    C   K    Y   D ++
Sbjct: 1971 ALREGMSWIVPVPLLSLLTARQLEQMVCGMPEICCDVLKKVVRYREVDEQH 2021



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 59/96 (61%), Positives = 74/96 (77%), Gaps = 3/96 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV---HVESVSCGL 470
            ++CGFKHSAVVT++G L+TFGNGDYGRLG G T N K+PERV AL       V +V+CGL
Sbjct: 1287 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANVACGL 1346

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            NHT+ ++  G  V+AFGDG+YGKLGLGN+  K +PQ
Sbjct: 1347 NHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQ 1382



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 28/133 (21%)

Query: 401  LTFANRLQYY---EAAIACGFK-HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
            LT  + LQ +   +   +CG   HS  +T +G ++++G+GDYG+LGHG +   + P ++ 
Sbjct: 1195 LTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 1254

Query: 457  ALNKVHVESV-----------------------SCGLNHTVCIADKGKAVYAFGDGEYGK 493
            AL    V  V                       SCG  H+  +   GK ++ FG+G+YG+
Sbjct: 1255 ALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGK-LFTFGNGDYGR 1313

Query: 494  LGLGNTGLKPTPQ 506
            LGLGNT  K  P+
Sbjct: 1314 LGLGNTSNKKLPE 1326



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  +T +G ++TFG      L      N   P+++ AL+ VHV+ V+ G  HT
Sbjct: 1410 VACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPALSGVHVQDVAVGAEHT 1469

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            + ++  G  VYA+G    G+LGLG+T
Sbjct: 1470 LALSSTGD-VYAWGSNSEGQLGLGHT 1494



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   + V+  NG +   G G YGRLG G + +  V   + AL    V  +  SCG +
Sbjct: 1157 VVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 1216

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 1217 GHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 1251



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + + QV  GR+  
Sbjct: 1212 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAG 1271

Query: 80   A 80
            A
Sbjct: 1272 A 1272



 Score = 42.0 bits (97), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 14   NIHI-VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
            ++H+ + +S G +H   V+  G++F +GN    +LGLGN  N + P+ V AL    I QV
Sbjct: 1280 HLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQV 1339

Query: 73   S 73
            +
Sbjct: 1340 A 1340


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/410 (52%), Positives = 275/410 (67%), Gaps = 13/410 (3%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + I A  +  I D+ VG EHVLA+++TG+V+ WGNN D QLGLG+    REP ++  L  
Sbjct: 774  QQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHSNAQREPCVIPDLKG 833

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNIRQ+SAGR+HSAAWTAPP PP  P       L+LG P+  P  +  L       +RAR
Sbjct: 834  KNIRQISAGRNHSAAWTAPPPPPRFP-PGAPMPLQLGHPEHTPPQFPALAEVSTVAVRAR 892

Query: 127  LKLLNRFSDLIYQVVRLLPL--GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSV 184
            L++L+ FSDL+Y   ++  L  G V+            V   LRPL A RV  LP+VR++
Sbjct: 893  LRVLHHFSDLVYSSWKMFSLMPGEVEAHAYNRGTIG-FVRGQLRPLLATRVSNLPIVRAM 951

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            G+TM+ GKN+GP +TV+RL  + K++ K IF QI+ QV K+K +DL LPSRAWKVKL+GE
Sbjct: 952  GRTMVQGKNYGPQITVKRLIGRGKKS-KAIFVQIATQVTKLKSADLCLPSRAWKVKLVGE 1010

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
            GADDAGGVFDDTITEMC EL  G V LL+ TPN  A+ G+NRDR++LNP  + S   L+ 
Sbjct: 1011 GADDAGGVFDDTITEMCQELEEGVVNLLIHTPNSTAEVGFNRDRFLLNP-AATSEDDLVL 1069

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
            +KFLGILFGVA+RTKKPL L L+PLVWK +V  P+T  D+E       +SLR IRDIH S
Sbjct: 1070 YKFLGILFGVAVRTKKPLDLHLAPLVWKQLVGIPLTPDDIE-------ESLRGIRDIHES 1122

Query: 365  GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            GV E  F EIIP+E FE  S  GR  P+V  G ++ LTF+NR +Y E A+
Sbjct: 1123 GVDETTFAEIIPIETFETQSADGRFVPMVPSGHNIHLTFSNRSEYVEQAL 1172



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 72/93 (77%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACGFKHSAVVT +G L+TFGNGDYGRLGHG + N K PERV AL K  +  V+CGLNHT
Sbjct: 630 MACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHT 689

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + ++  G  V+AFGDG+YGKLGLG+   K +PQ
Sbjct: 690 LVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQ 722



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 4/123 (3%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
           GR   +   G+ V +    +       + CG   + VV  NG +   G G YGRLG G +
Sbjct: 496 GRHGQLAESGRGVNVPTVTKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNS 555

Query: 447 MNWKVPERVVALNK---VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
            +      + AL     + + +      H++ + D G+ V+++GDG+YGKLG GN+  + 
Sbjct: 556 DDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGE-VFSWGDGDYGKLGHGNSDRQR 614

Query: 504 TPQ 506
            P+
Sbjct: 615 RPR 617



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 414 IACGFKHSAVVTSNG-YLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V++++G  ++ FG+GDYG+LG G+      P+ +  L  +  + + CG   
Sbjct: 682 VACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQF 741

Query: 473 TVCIADKGKAVYAFG 487
           +V + + G+ V++FG
Sbjct: 742 SVVLTNDGR-VFSFG 755



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 43/78 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I A +   +V+++ G +H   V+  G++F +GN    +LG GN  N + P+ V AL  
Sbjct: 617 RQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEK 676

Query: 67  KNIRQVSAGRSHSAAWTA 84
             I QV+ G +H+   +A
Sbjct: 677 HAIGQVACGLNHTLVLSA 694



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 3/78 (3%)

Query: 9   IPAFKNIHIVDI--SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           I A +   ++ I  S G++ H LA++++G+VF+WG+    +LG GN    R P+ + AL 
Sbjct: 564 ISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALR 623

Query: 66  NKNIRQVSAGRSHSAAWT 83
            + +  ++ G  HSA  T
Sbjct: 624 GEEVVNMACGFKHSAVVT 641



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG + S V+T++G +++FG         G     + P+++ AL    ++ V  G  H 
Sbjct: 735 ICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHV 794

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +   G+ V+ +G+   G+LGLG++  +  P
Sbjct: 795 LALTSTGE-VWGWGNNVDGQLGLGHSNAQREP 825


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Acyrthosiphon
            pisum]
          Length = 4257

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 181/410 (44%), Positives = 263/410 (64%), Gaps = 8/410 (1%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I  F+   + D++ G +HVL ++  G V+AWGNN +  LG G+ +  ++P ++  LS+KN
Sbjct: 3682 IFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLPVQKPMIIQILSDKN 3741

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLK 128
            I+Q++  R+H AAWTA P    +   + +      LP  IP  YG+LQ   +  I AR+K
Sbjct: 3742 IKQIATSRTHCAAWTAEPFSRDSTNISHND-----LPTSIPYQYGYLQEYKMASIAARMK 3796

Query: 129  LLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGKTM 188
             L +FS+++Y   +++P    + DW     + WL    L+ LF  ++  LPL++ + +TM
Sbjct: 3797 CLQQFSNILYTCWQMIPFNTTEFDWSNIKRWHWLADKRLKCLFTNKIIKLPLMKVISRTM 3856

Query: 189  LVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADD 248
              G+N+GP + V+RL+  S  T   IF Q+++Q+V +    LRLPSRAWKVKL+GEGADD
Sbjct: 3857 NQGQNYGPQIIVKRLS--SNGTSMCIFEQVAKQIVNINAELLRLPSRAWKVKLVGEGADD 3914

Query: 249  AGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFL 308
            AGGVFDDTI +M  EL +  V LL+ TPNG  +TGYN+DR+I N  ++   + L  F+FL
Sbjct: 3915 AGGVFDDTIAQMMEELQTLTVKLLILTPNGRNETGYNQDRFIFNSKMNH-FKQLQQFQFL 3973

Query: 309  GILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTE 368
            G+LFGVAIRTKKPL LPLSPL+WK+I+ E +  +DLE+NDT YAQ+L +I++IH +GVTE
Sbjct: 3974 GMLFGVAIRTKKPLALPLSPLIWKMIIGESLNISDLEENDTYYAQNLTSIQNIHQTGVTE 4033

Query: 369  ANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGF 418
             NF E IP     G  W     P++  G  V +T++NRL + E A+   F
Sbjct: 4034 ENFEEAIPFLNMTGTDWMDNTVPLIPNGHYVSVTYSNRLTFCELALKQRF 4083



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 64/93 (68%), Gaps = 2/93 (2%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG KHSAV++ +G +Y FG+ ++G+LG G  +N K P ++V    ++++ ++CG NHT
Sbjct: 3538 VACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHT 3597

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +CI +    V+AFG+GE GKLG+G+      PQ
Sbjct: 3598 ICIGE--NVVWAFGEGEGGKLGIGSKKDIYVPQ 3628



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 60/93 (64%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G++HSA VTS+G LYT+G GD+GRLGHG      +P  V +L+ + V  V+CG  HT
Sbjct: 484 VSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHT 543

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  +  G  V++FG G+ GKLG GNT     PQ
Sbjct: 544 LACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQ 576



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 1/78 (1%)

Query: 420  HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
            HS  +T  G ++++G+GD+G+LGHG     + P+ + +L  V V  V+CG  H+  ++  
Sbjct: 3492 HSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQD 3551

Query: 480  GKAVYAFGDGEYGKLGLG 497
            G+ VY FG  E+GKLGLG
Sbjct: 3552 GE-VYVFGSAEHGKLGLG 3568



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNKNIRQVSAG 75
           I+DISVG  H LA++    V+AWG+N   Q G G+  +    P  V+ L  K I Q+SAG
Sbjct: 637 IIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQGHSTSPVSRPSKVINLEGKQINQISAG 696

Query: 76  RSHSAAWTA-PPLPPHTPGHTP 96
            SHS AWT  PP       H+P
Sbjct: 697 TSHSVAWTTLPPDRQTNVWHSP 718



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 6/101 (5%)

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
           +Q  EA   C F    ++ + G +   G   YGRLG G + N  VP+R+    K+   S 
Sbjct: 375 VQQVEAGQYCTF----IIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSS 430

Query: 467 SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           S G + H++ ++D G+ VY++GDG+YGKLG G+      P+
Sbjct: 431 SKGCDGHSLALSDTGE-VYSWGDGDYGKLGHGDVATHKEPK 470



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 6/116 (5%)

Query: 396  GQSVPLTFANRLQYYEAA--IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            GQ + +    ++Q ++ A  I CG   + V+TS G + + G G+YGRLGHG + +     
Sbjct: 3411 GQCINIWSPIKIQNFKIAQRIVCGQNCTFVLTSQGTVLSCGEGNYGRLGHGHSDSLPNLT 3470

Query: 454  RVVALNKVHVESVSCGL---NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + AL    +  VS  +    H++ + + G+ V+++GDG++GKLG GN   +  P+
Sbjct: 3471 MISALQGFVITQVSTSIGSDGHSLALTETGE-VFSWGDGDFGKLGHGNNERQRKPK 3525



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 7/128 (5%)

Query: 382 GASWTGRITPIVTGGQSVP--LTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYG 439
           G +  GR+    +  Q VP  +    +++   ++  C   HS  ++  G +Y++G+GDYG
Sbjct: 398 GKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCD-GHSLALSDTGEVYSWGDGDYG 456

Query: 440 RLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           +LGHG     K P+ +    + KV +E VS G  H+  +   G+ +Y +G+G++G+LG G
Sbjct: 457 KLGHGDVATHKEPKLIQGPFIGKV-IELVSAGYRHSAAVTSDGQ-LYTWGEGDHGRLGHG 514

Query: 498 NTGLKPTP 505
           +   +  P
Sbjct: 515 DCNPRFIP 522



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 53/89 (59%), Gaps = 4/89 (4%)

Query: 414 IACGFKHSAVVTSNG-YLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+   + +G  +++FG+GD G+LGHG T+    P+++  L    ++ V+ G++ 
Sbjct: 536 VACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHF 595

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGL 501
           +V +   G+ V+ +G G    LG G++ +
Sbjct: 596 SVALTCTGE-VFTWGQG--SNLGCGSSEI 621



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 18   VDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            V  S+G++ H LA++ TG+VF+WG+    +LG GN    R+P+L+ +L +  + QV+ G 
Sbjct: 3483 VSTSIGSDGHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGH 3542

Query: 77   SHSAA 81
             HSA 
Sbjct: 3543 KHSAV 3547



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 6/90 (6%)

Query: 1   MSGTSGRHIPAFKNIHI----VDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINY 55
           +  +S + +P   NI+     V  S G + H LA+S+TG+V++WG+    +LG G+   +
Sbjct: 407 LGNSSNQPVPKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATH 466

Query: 56  REPQLVLA-LSNKNIRQVSAGRSHSAAWTA 84
           +EP+L+      K I  VSAG  HSAA T+
Sbjct: 467 KEPKLIQGPFIGKVIELVSAGYRHSAAVTS 496



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            IACG  H+  +  N  ++ FG G+ G+LG G+  +  VP+ ++ LN  +++   CG   T
Sbjct: 3590 IACGQNHTICIGEN-VVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFT 3648

Query: 474  VCIADKGKAVYAFG 487
            + +++ G+ +Y+ G
Sbjct: 3649 MFLSEDGE-LYSCG 3661



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 18/71 (25%), Positives = 41/71 (57%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I +  ++ ++ ++ G +H   +S  G+V+ +G+    +LGLG  IN + P  ++     N
Sbjct: 3527 IESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKIVHKGFLN 3586

Query: 69   IRQVSAGRSHS 79
            I+ ++ G++H+
Sbjct: 3587 IKYIACGQNHT 3597



 Score = 41.6 bits (96), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 20  ISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSH 78
           ++ G+ H LA S  G  V+++G+  + +LG GN I   +PQ +  L +  I++V+AG   
Sbjct: 536 VACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHF 595

Query: 79  SAAWTA 84
           S A T 
Sbjct: 596 SVALTC 601



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLALS 65
           + I   ++  I  ++ G    +A++ TG+VF WG  S+  LG G ++I    P +V  L 
Sbjct: 576 QKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSN--LGCGSSEITLFSPAVVEDLM 633

Query: 66  NKNIRQVSAGRSHSAAWT 83
            + I  +S G SH  A T
Sbjct: 634 QQMIIDISVGDSHCLALT 651



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 12/103 (11%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           +S G  H  AV++ GQ++ WG     +LG G+      P LV +LS+  +  V+ G +H+
Sbjct: 484 VSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHT 543

Query: 80  AA--------WTAPPLPPHTPGHTPSSSLRLGLPQDIP--DHY 112
            A        W+         GH   +++RL  PQ I    HY
Sbjct: 544 LACSRDGNTVWSFGSGDNGKLGH--GNTIRLYKPQKIEGLRHY 584


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/453 (45%), Positives = 284/453 (62%), Gaps = 52/453 (11%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +P+ + + I DI+VG EHVLA+S+TG ++AWG NS+ QLGLG+    +EP L+ AL  KN
Sbjct: 3969 VPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLVKEPTLITALQGKN 4028

Query: 69   IRQVSAGRSHSAAWTAPPLPPHT---PGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRA 125
            I+Q+SAGR HS+AWTAP    ++   P      S++LGLPQ +P  Y  L++    ++  
Sbjct: 4029 IKQISAGRCHSSAWTAPSTSKNSALCPCQGGPGSVQLGLPQSVPPQYNTLKDLSPRVLSM 4088

Query: 126  RLKLLNRFSDLIYQVVRLLPLGNVD-QDWVQCTPYS----WLVHPSLRPLFAPRVYTLPL 180
            RL++L+ FSDL+Y+  RLL   N+D ++    + YS     ++   LR L +P+V TLPL
Sbjct: 4089 RLRVLHNFSDLMYKSWRLL---NLDPKNPTSTSRYSSGTTAIIRGELRGLLSPKVNTLPL 4145

Query: 181  VRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVK 240
            VR +G+TM  GK  GP +TV+R++T+ + + KPIF QI++QVV +   +LRLPSRAWKVK
Sbjct: 4146 VRCIGRTMTQGKTHGPQITVKRISTRGRSS-KPIFVQIAKQVVSLNPLELRLPSRAWKVK 4204

Query: 241  LLGEGADDAGGVFDDTITEMC--------------------------------------- 261
            L+GEGADDAGGVFDDTITEMC                                       
Sbjct: 4205 LVGEGADDAGGVFDDTITEMCQVGRSSAQQRQQITERVMFCNILSVLLMCFITYNIQSYY 4264

Query: 262  GELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKP 321
             EL SG V LL+ TPNG AD G N DR++LNP  + S   ++ F+FLG+L  VAIRT+KP
Sbjct: 4265 QELQSGVVDLLIHTPNGFADVGSNTDRFLLNP-AAFSEDHMIQFRFLGVLMAVAIRTRKP 4323

Query: 322  LPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFE 381
            L L L+P VWK +   P+  +DLE+ D L  ++L+ I  +  SG+TE NF  +IPL+ F 
Sbjct: 4324 LDLHLAPWVWKQLCSIPLGGSDLEEVDLLSYRTLQGILHLENSGITEENFHVMIPLDSFM 4383

Query: 382  GASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
              S  GR+ P+V GGQ++ LTFANR +Y E  +
Sbjct: 4384 VHSADGRLVPVVPGGQNISLTFANRTEYVERGL 4416



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 70/93 (75%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACGF+HSAVVT++G L+TFG+G+ GRLG  +T N   PERV AL   HV  VSCGLNHT
Sbjct: 3823 LACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHT 3882

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G AV+AFGDG+YGKLG G++  K  PQ
Sbjct: 3883 LVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQ 3915



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           + + G++HSA VT++G LYT+G GD+GRLGH  + +   P  V  ++ V    V+CG +H
Sbjct: 481 SASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG--QVACGSSH 538

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ +A  G+ +++FG G+ GKLG G+T
Sbjct: 539 TIAVAQDGRTMWSFGGGDNGKLGHGDT 565



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALS 65
           R +       I+DIS G  H LA+S+  +V+AWGNN+  Q G G+       P+ VL L 
Sbjct: 623 RFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLE 682

Query: 66  NKNIRQVSAGRSHSAAWTAPP 86
             +I+Q++AG SHS AWTA P
Sbjct: 683 GVSIQQITAGTSHSLAWTAVP 703



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 4/122 (3%)

Query: 382  GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGY-LYTFGNGDYGR 440
            G+  +GR+    T  +  P   A    Y+   ++CG  H+ V++ +G  ++ FG+GDYG+
Sbjct: 3843 GSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGK 3902

Query: 441  LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
            LG G++     P++V  L    ++ V CG   +V +A  G  VY FG      +GL ++ 
Sbjct: 3903 LGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGH-VYTFGQERL--IGLPDSM 3959

Query: 501  LK 502
            LK
Sbjct: 3960 LK 3961



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            + CG   S ++ SNG +   G G YGRLG G + +  VP  + A     V  +  SCG +
Sbjct: 3716 VVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSD 3775

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG++GKLG GN   +  P+
Sbjct: 3776 GHSMALTETGE-VFSWGDGDFGKLGHGNNERQRRPK 3810



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H+  +T +G ++++G+G+YG+LGHG +   K P+ V     +K+ V S S G  H+  + 
Sbjct: 435 HTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKI-VVSASAGYRHSAAVT 493

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + G+ +Y +G+G++G+LG  ++  + TP
Sbjct: 494 NDGE-LYTWGEGDFGRLGHSDSQSRNTP 520



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-----LNKVH 462
           Q  EA   C F     V+++G +   G G YGRLG G + N  +P+++V      + KV 
Sbjct: 372 QTIEAGQYCTFS----VSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVF 427

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+ I   G+ V+++GDGEYGKLG GN+  +  P+
Sbjct: 428 SSKGSDG--HTLAITVDGE-VFSWGDGEYGKLGHGNSATQKYPK 468



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S V+ ++G++YTFG      L      N   P+ V +L  + +E ++ G  H 
Sbjct: 3928 VCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHV 3987

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + ++  G  +YA+G    G+LGLG+  L   P
Sbjct: 3988 LALSSTGD-IYAWGCNSEGQLGLGHCNLVKEP 4018



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 3/79 (3%)

Query: 9    IPAFKNIHIVDI--SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
            I AF+   +  +  S G++ H +A++ TG+VF+WG+    +LG GN    R P+ + AL 
Sbjct: 3757 ISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQ 3816

Query: 66   NKNIRQVSAGRSHSAAWTA 84
             +++ Q++ G  HSA  TA
Sbjct: 3817 GEDVVQLACGFRHSAVVTA 3835



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+  V  +G  +++FG GD G+LGHG T     P+ + AL+   +  V  G   
Sbjct: 532 VACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQS 591

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ V+A+G G    LG G+   T L+P
Sbjct: 592 SLALTSAGQ-VFAWGCGSC--LGCGSSETTSLRP 622



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 430  LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
            +Y +GNG YG+L  GT  N  +P     L++   + V CG N +  I   G AV A G+G
Sbjct: 3683 VYLWGNGRYGQLA-GTGTNLTLPTLAPCLSQ--TQQVVCGQNCSFLIQSNG-AVMAVGEG 3738

Query: 490  EYGKLGLGNT 499
            +YG+LG GN+
Sbjct: 3739 QYGRLGQGNS 3748



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           +NI  V  S G++ H LA++  G+VF+WG+    +LG GN    + P++V   L +K + 
Sbjct: 421 RNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVV 480

Query: 71  QVSAGRSHSAAWT 83
             SAG  HSAA T
Sbjct: 481 SASAGYRHSAAVT 493



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + I A +   +V ++ G  H   V+  G++F +G+    +LG  +  N  +P+ V AL  
Sbjct: 3810 KQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEG 3869

Query: 67   KNIRQVSAGRSHS 79
             ++ QVS G +H+
Sbjct: 3870 YHVGQVSCGLNHT 3882



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           P F  I +V  S G  H  AV+N G+++ WG     +LG  +  +   P LV  +S   +
Sbjct: 473 PLFSKI-VVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDIS--GV 529

Query: 70  RQVSAGRSHSAA 81
            QV+ G SH+ A
Sbjct: 530 GQVACGSSHTIA 541



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A     I  +  G++  LA+++ GQVFAWG  S    G     + R P+ V  LS   
Sbjct: 574 IEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLR-PRFVEDLSITK 632

Query: 69  IRQVSAGRSHSAA 81
           I  +S G SH  A
Sbjct: 633 IIDISCGDSHCLA 645



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +  G + S  +TS G ++ +G G     G   T + + P  V  L+   +  +SCG +H 
Sbjct: 585 VCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLR-PRFVEDLSITKIIDISCGDSHC 643

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++ + + VYA+G+   G+ G G+T
Sbjct: 644 LALSHENE-VYAWGNNTMGQCGQGHT 668



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINYREPQLVLALS 65
              + A +  H+  +S G  H L +S  G  V+A+G+    +LG G+      PQ V  L 
Sbjct: 3862 ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLC 3921

Query: 66   NKNIRQVSAGRSHS 79
            NK +++V  G   S
Sbjct: 3922 NKGMKKVCCGAQFS 3935



 Score = 38.5 bits (88), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESVSCGLNH 472
           I+CG  H   ++    +Y +GN   G+ G G T+     P++V+ L  V ++ ++ G +H
Sbjct: 636 ISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSH 695

Query: 473 TV 474
           ++
Sbjct: 696 SL 697


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score =  338 bits (866), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 189/464 (40%), Positives = 272/464 (58%), Gaps = 40/464 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A     I DI+ G EH LA++  G V++WGN++D QLGLG  +  REP L+ +L  
Sbjct: 3694 QQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQG 3753

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K IRQ+SAG +HSAAWT  P        T SSSL LGLP+ IP+ YG L    + LIR+R
Sbjct: 3754 KGIRQISAGHNHSAAWTVAPASIRKAMAT-SSSLELGLPERIPEIYGSLAGIDIQLIRSR 3812

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L+ L   S+ IY   RLL L       +    +  ++   LRPL   RV   P +R + K
Sbjct: 3813 LQYLLDMSEAIYYSWRLLDLCPKKLSHIS-NGFMGIMQGFLRPLLPTRVTMQPFLRHISK 3871

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGA 246
            TML  +NFGP+V                     +QV++   ++L LP RAWKVKL+GEGA
Sbjct: 3872 TMLHNRNFGPTV---------------------KQVMQSNLAELCLPMRAWKVKLVGEGA 3910

Query: 247  DDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFK 306
            DDAGGVFDDT++EMC EL S  V LL+ TPN V   GYN+DR+I+NP  S S++ L  F+
Sbjct: 3911 DDAGGVFDDTVSEMCKELESNDVSLLIPTPNSVDQLGYNQDRFIINPSAS-SIEELKKFE 3969

Query: 307  FLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGV 366
            FLG+L G+++R+KKPL L LSP VWK I   P+T  D+E+ DTL+ Q++R++RD+  + +
Sbjct: 3970 FLGVLLGISVRSKKPLDLHLSPTVWKQICGIPLTEGDIEEVDTLFIQTMRSLRDVEYNDI 4029

Query: 367  TEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTS 426
             E  F E  P+  F      G+  PIV GG+++ L++  R+ Y ++AI   F+   V + 
Sbjct: 4030 DENTFQEYFPISTFVAKDSNGKFVPIVPGGRNIELSYNTRMNYVKSAIE--FRLHEVDSQ 4087

Query: 427  NGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCG 469
               +         R G    M+W +P  +++ + ++ +E ++CG
Sbjct: 4088 IAAI---------RKG----MSWVIPVPLLSFMTELQLEKITCG 4118



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/93 (54%), Positives = 66/93 (70%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG KHSA+VT +G L+TFG  D GRLG G T N K+P +V AL  + VE ++CG NHT
Sbjct: 3549 VACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHT 3608

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V +    ++V+ FG+GEYG+LGLG T  K TPQ
Sbjct: 3609 VVVTTDRESVWTFGEGEYGQLGLGRTTAKMTPQ 3641



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G++HSA +TS G LYT+G+GDYGRLGHG   +  +P  V  +  V   SVSCG + T
Sbjct: 527 IAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHSRSIPTLVKDITGVG--SVSCGSSFT 584

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V I+     V++FG G+ GKLG G+T     P+
Sbjct: 585 VVISQDATTVWSFGAGDNGKLGHGDTSRVYRPK 617



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALS 65
           + +  F+++ I+DI+VG  H LA++    V++WGNN+  Q GLGN  +    P+ V    
Sbjct: 668 KRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLLPRKVTGFD 727

Query: 66  NKNIRQVSAGRSHSAAWTAPP 86
           N  I Q+S G SHS AWTA P
Sbjct: 728 NHVIYQISVGTSHSIAWTALP 748



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+  + S+G +Y++G+GDYG+LGHG  +  K P+ ++  +    V  ++ G  H+  I  
Sbjct: 480 HTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITS 539

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +G  +Y +GDG+YG+LG G+   +  P
Sbjct: 540 EG-LLYTWGDGDYGRLGHGDNHSRSIP 565



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 2/107 (1%)

Query: 382  GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSN-GYLYTFGNGDYGR 440
            GAS  GR+    T  + +P             IACG  H+ VVT++   ++TFG G+YG+
Sbjct: 3569 GASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQ 3628

Query: 441  LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            LG G T     P+ V A +K++++ + CG   T+ +  +GK VY+ G
Sbjct: 3629 LGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGK-VYSCG 3674



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN 471
            I CG   + V+  +G +   G G YGRLG G + +      + AL    V  +  S GL 
Sbjct: 3442 IHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGLE 3501

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 3502 GHSLALTETGE-VFSWGDGDYGKLGHGNSERQRRPR 3536



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQVSAGRSHSAAWTA 84
           H LA+++ G++++WG+    +LG GN +  + P+L+L  +  K +RQ++ G  HSAA T+
Sbjct: 480 HTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITS 539

Query: 85  PPL 87
             L
Sbjct: 540 EGL 542



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 7    RHIPAFKNIHIVDI--SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            R I A +   + ++  S G E H LA++ TG+VF+WG+    +LG GN    R P+ + A
Sbjct: 3481 RPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPRQIEA 3540

Query: 64   LSNKNIRQVSAGRSHSAAWT 83
            L  +++  V+ G  HSA  T
Sbjct: 3541 LRGEDVLHVACGHKHSAIVT 3560



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 7/81 (8%)

Query: 432 TFGN---GDYGRLGHGTTMNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYA 485
           +F N   G+YGRLG G + N   P+ +   ++  ++++  S G + HT+ IA  G+ +Y+
Sbjct: 434 SFANSEQGNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGR-IYS 492

Query: 486 FGDGEYGKLGLGNTGLKPTPQ 506
           +GDG+YGKLG GN   + +P+
Sbjct: 493 WGDGDYGKLGHGNHVTQKSPK 513



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 45/97 (46%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   ++ ++ G +H   V+  G++F +G +   +LGLGN  N + P  V AL  
Sbjct: 3536 RQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQP 3595

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG 103
              +  ++ G +H+   T       T G      L LG
Sbjct: 3596 IMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLG 3632



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 413 AIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +++CG   + V++ +   +++FG GD G+LGHG T     P+ +  L  + +  V C   
Sbjct: 576 SVSCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQ 635

Query: 472 HTVCIADKGKAVYAFGDG 489
            ++ +   G+ V+ +G G
Sbjct: 636 SSLALTSIGQ-VFVWGSG 652



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 35/60 (58%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            IA G++H+  +T  G ++++GN   G+LG G T+  + P  + +L    +  +S G NH+
Sbjct: 3707 IAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNHS 3766



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGLNH 472
           + C  + S  +TS G ++ +G+G    LG+G     + VP+R+     + +  ++ G NH
Sbjct: 630 VCCASQSSLALTSIGQVFVWGSGPC--LGYGQADATFLVPKRLDEFQDLQIIDIAVGDNH 687

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
            + +      VY++G+   G+ GLGN
Sbjct: 688 CLALTCDND-VYSWGNNASGQCGLGN 712


>gi|405970628|gb|EKC35517.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 1859

 Score =  324 bits (831), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 183/403 (45%), Positives = 241/403 (59%), Gaps = 49/403 (12%)

Query: 71   QVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLL 130
             +SAGR+HSAAWT P  P   PG  P   L+LG P  IP     L+  P+  I+ RLKLL
Sbjct: 1361 HISAGRTHSAAWTTPCPPQRIPG-VPVP-LQLGTPDKIPASCSTLRECPIEDIQGRLKLL 1418

Query: 131  NRFSDLIYQVVRLLPLGNVDQDWV--QCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGKTM 188
            + FSDLIY   RLLPL  + Q  +       S +V   LRPL +PRV++LP+VR++GKTM
Sbjct: 1419 HHFSDLIYSSWRLLPLTTIAQGEMPGYACGMSGIVDGRLRPLLSPRVFSLPMVRAIGKTM 1478

Query: 189  LVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADD 248
            + GKN+GP +TV+RL+T+ K+  KP+F QI +QV+K++  DLRLP+RAWKVKL+GEGADD
Sbjct: 1479 VQGKNYGPPITVKRLSTRGKKC-KPVFTQIGQQVIKLRAEDLRLPARAWKVKLIGEGADD 1537

Query: 249  AGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFL 308
            AGGVFDDTITEMC EL +G VP  + TPN   ++G NRDR++LNP  S      M FKFL
Sbjct: 1538 AGGVFDDTITEMCQELETGVVPFFIPTPNARNESGNNRDRFLLNPACSGEDDFAM-FKFL 1596

Query: 309  GILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTE 368
            G+LFGVAIRTKKPL L L+P VWKL+V   +   D+E                       
Sbjct: 1597 GVLFGVAIRTKKPLDLHLAPSVWKLLVGISLRLDDIE----------------------- 1633

Query: 369  ANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNG 428
                E IPL+CFEG S  G + P++ GG ++ L F NR +Y EA +              
Sbjct: 1634 ----EFIPLDCFEGQSADGSLVPVIPGGGTLQLNFNNRREYVEAVL-------------N 1676

Query: 429  YLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
            Y     N     +  G  M+W +P  ++  L   ++E + CG+
Sbjct: 1677 YRLQEMNRQAAAVREG--MSWIIPVPLLTLLTSKNLEQLVCGM 1717


>gi|313236433|emb|CBY11750.1| unnamed protein product [Oikopleura dioica]
          Length = 2239

 Score =  311 bits (796), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 169/416 (40%), Positives = 256/416 (61%), Gaps = 20/416 (4%)

Query: 14   NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
            N  +  IS G E+ LA+   G V++WGNNSD Q+G G+     EP  +L L+   I+QV 
Sbjct: 1674 NKRVFQISCGAEYTLALDEDGNVWSWGNNSDGQVGCGHFNKVHEP--LLTLTGHRIKQVR 1731

Query: 74   AGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRF 133
            AG++HS AWT+PP      G+T      LG P +IP  Y  L+++ +   R RLK L++F
Sbjct: 1732 AGKTHSIAWTSPP-KSDFGGNT------LGTPDNIPSKYAVLKSEDIEDCRLRLKHLHKF 1784

Query: 134  SDLIYQVVRLLPLGNVDQDWVQCTPY----SWLVHPSLRPLFAPRVYTLPLVRSVGKTML 189
            ++ +++  ++L L +  +     TP+    S++    LR L   R+  LP+ +++ +TM+
Sbjct: 1785 NETVFRCWKMLDLCSKPRFH---TPFTIAESFVADGRLRALLTSRLTVLPITKAIQRTMV 1841

Query: 190  VGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDA 249
             G+N+GP +TV+RL+TK K+  + IF QI+ Q+  + G+DLRLPSRAWKV+L+GEGADDA
Sbjct: 1842 QGRNYGPQITVKRLSTKGKKR-QTIFEQIAAQIEPVNGADLRLPSRAWKVRLVGEGADDA 1900

Query: 250  GGVFDDTITEMCGELLSGA--VPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKF 307
            GGVFD+T+TE+C EL  GA  + LL++TPN   D G  RD ++ NP  +  LQ L   +F
Sbjct: 1901 GGVFDETLTEICEELERGAHGLSLLIKTPNNKNDVGSYRDCFMFNPQANSHLQ-LCQLRF 1959

Query: 308  LGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVT 367
            +GI+FGVAIRTKKPL + L+P +W+ +  E    + L++ D     +L+ I +I    V 
Sbjct: 1960 IGIMFGVAIRTKKPLDIHLAPAIWRQLAGEEPNASKLDEIDGYILTTLKCIDEIDKHEVD 2019

Query: 368  EANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAV 423
            E NF  IIPL+ +E  S +G+  P+V GG+ + L + NR +Y   A+    +   V
Sbjct: 2020 EENFNVIIPLDSWEVQSASGQFVPVVPGGRQLKLDYNNRREYVHHALETRLEECNV 2075



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/85 (61%), Positives = 64/85 (75%), Gaps = 2/85 (2%)

Query: 415  ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
             CG+KH+AVVT+ GYLYTFG GDYGRLGHG T + K P  V      ++ SVSCGLNHT+
Sbjct: 1529 CCGYKHTAVVTATGYLYTFGYGDYGRLGHGNTTSKKTPTLVHDCQ--NIASVSCGLNHTL 1586

Query: 475  CIADKGKAVYAFGDGEYGKLGLGNT 499
             ++  G  V+AFGDG++GKLGLGNT
Sbjct: 1587 ALSRDGMTVWAFGDGDFGKLGLGNT 1611



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 420  HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
            H+  +T +G L+T+G+GDYG+LGHG +   + P  V  L    V    CG  HT  +   
Sbjct: 1482 HTLAITESGELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTAT 1541

Query: 480  GKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G  +Y FG G+YG+LG GNT  K TP
Sbjct: 1542 G-YLYTFGYGDYGRLGHGNTTSKKTP 1566



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 8/105 (7%)

Query: 405  NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            + +Q  E  + C F    + +++G + + G G YGRLGHG + +  VP  V AL    V 
Sbjct: 1416 DNMQTIELGLNCTF----LCSASGAVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVT 1471

Query: 465  SVSCGL---NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +S  +    HT+ I + G+ ++ +GDG+YGKLG GN+  +  P+
Sbjct: 1472 HLSSSVGSDGHTLAITESGE-LFTWGDGDYGKLGHGNSERQRRPR 1515



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 2/85 (2%)

Query: 412  AAIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            A+++CG  H+  ++ +G  ++ FG+GD+G+LG G T+  + P ++ AL  V ++SV CG 
Sbjct: 1576 ASVSCGLNHTLALSRDGMTVWAFGDGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGH 1635

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLG 495
              +V +A  G  VY  G   +  +G
Sbjct: 1636 QWSVFLAINGD-VYVCGQDAFNGIG 1659



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            SVG++ H LA++ +G++F WG+    +LG GN    R P+LV  L  + +     G  H+
Sbjct: 1476 SVGSDGHTLAITESGELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHT 1535

Query: 80   AAWTA 84
            A  TA
Sbjct: 1536 AVVTA 1540



 Score = 42.4 bits (98), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 16   HIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +I  +S G  H LA+S  G  V+A+G+    +LGLGN +  + P  + AL N  I+ V  
Sbjct: 1574 NIASVSCGLNHTLALSRDGMTVWAFGDGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHC 1633

Query: 75   GRSHS 79
            G   S
Sbjct: 1634 GHQWS 1638


>gi|313221384|emb|CBY32137.1| unnamed protein product [Oikopleura dioica]
          Length = 1586

 Score =  308 bits (790), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 168/413 (40%), Positives = 255/413 (61%), Gaps = 20/413 (4%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            +  IS G E+ LA+   G V++WGNNSD Q+G G+     EP  +L L+   I+QV AG+
Sbjct: 1024 VFQISCGAEYTLALDEDGNVWSWGNNSDGQVGCGHFNKVHEP--LLTLTGHRIKQVRAGK 1081

Query: 77   SHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSDL 136
            +HS AWT+PP      G+T      LG P +IP  Y  L+++ +   R RLK L++F++ 
Sbjct: 1082 THSIAWTSPP-KSDFGGNT------LGTPDNIPAKYAVLKSEDIEDCRLRLKHLHKFNET 1134

Query: 137  IYQVVRLLPLGNVDQDWVQCTPY----SWLVHPSLRPLFAPRVYTLPLVRSVGKTMLVGK 192
            +++  ++L L +  +     TP+    S++    LR L   R+  LP+ +++ +TM+ G+
Sbjct: 1135 VFRCWKMLDLCSKPRFH---TPFTIAESFVADGRLRALLTSRLTVLPITKAIQRTMVQGR 1191

Query: 193  NFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGV 252
            N+GP +TV+RL+TK K+  + IF QI+ Q+  + G+DLRLPSRAWKV+L+GEGADDAGGV
Sbjct: 1192 NYGPQITVKRLSTKGKKR-QTIFEQIAAQIEPVNGADLRLPSRAWKVRLVGEGADDAGGV 1250

Query: 253  FDDTITEMCGELLSGA--VPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGI 310
            FD+T+TE+C EL  GA  + LL++TPN   D G  RD ++ NP  +  LQ L   +F+GI
Sbjct: 1251 FDETLTEICEELERGAHGLSLLIKTPNNKNDVGSYRDCFMFNPQANSHLQ-LCQLRFIGI 1309

Query: 311  LFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEAN 370
            +FGVAIRTKKPL + L+P +W+ +  E    + L++ D     +L+ I +I    V E N
Sbjct: 1310 MFGVAIRTKKPLDIHLAPAIWRQLAGEEPNASKLDEIDGYILTTLKCIDEIDKHEVDEEN 1369

Query: 371  FPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAV 423
            F  IIPL+ +E  S +G+  P+V GG+ + L + NR +Y   A+    +   V
Sbjct: 1370 FNVIIPLDSWEVQSASGQFVPVVPGGRQLKLDYNNRREYVHHALETRLEECNV 1422



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/85 (61%), Positives = 64/85 (75%), Gaps = 2/85 (2%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
            CG+KH+AVVT+ GYLYTFG GDYGRLGHG T + K P  V      ++ SVSCGLNHT+
Sbjct: 876 CCGYKHTAVVTATGYLYTFGYGDYGRLGHGNTTSKKTPTLVHDCQ--NIVSVSCGLNHTL 933

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNT 499
            ++  G  V+AFGDG++GKLGLGNT
Sbjct: 934 ALSRDGMTVWAFGDGDFGKLGLGNT 958



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           H+  +T +G L+T+G+GDYG+LGHG +   + P  V  L    V    CG  HT  +   
Sbjct: 829 HTLAITESGELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTAT 888

Query: 480 GKAVYAFGDGEYGKLGLGNTGLKPTP 505
           G  +Y FG G+YG+LG GNT  K TP
Sbjct: 889 G-YLYTFGYGDYGRLGHGNTTSKKTP 913



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 8/105 (7%)

Query: 405 NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
           + +Q  E  + C F    + +++G + + G G YGRLGHG + +  VP  V AL    V 
Sbjct: 763 DNMQTIELGLNCTF----LCSASGAVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVT 818

Query: 465 SVSCGL---NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +S  +    HT+ I + G+ ++ +GDG+YGKLG GN+  +  P+
Sbjct: 819 HLSSSVGSDGHTLAITESGE-LFTWGDGDYGKLGHGNSERQRRPR 862



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 413  AIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +++CG  H+  ++ +G  ++ FG+GD+G+LG G T+  + P ++ AL  V ++SV CG  
Sbjct: 924  SVSCGLNHTLALSRDGMTVWAFGDGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQ 983

Query: 472  HTVCIADKGKAVYAFGDGEYGKLG 495
             +V +A  G  VY  G   +  +G
Sbjct: 984  WSVFLAINGD-VYVSGQDAFNGIG 1006



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 21  SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           SVG++ H LA++ +G++F WG+    +LG GN    R P+LV  L  + +     G  H+
Sbjct: 823 SVGSDGHTLAITESGELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHT 882

Query: 80  AAWTA 84
           A  TA
Sbjct: 883 AVVTA 887



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 16  HIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           +IV +S G  H LA+S  G  V+A+G+    +LGLGN +  + P  + AL N  I+ V  
Sbjct: 921 NIVSVSCGLNHTLALSRDGMTVWAFGDGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHC 980

Query: 75  GRSHS 79
           G   S
Sbjct: 981 GHQWS 985


>gi|349603422|gb|AEP99263.1| putative E3 ubiquitin-protein ligase HERC1-like protein, partial
           [Equus caballus]
          Length = 387

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 141/273 (51%), Positives = 180/273 (65%), Gaps = 18/273 (6%)

Query: 199 TVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTIT 258
           TV+R++T+ ++  KPIF QI+RQVVK+  SDLRLPSRAWKVKL+GEGADDAGGVFDDTIT
Sbjct: 1   TVKRISTRGRKC-KPIFVQIARQVVKLNASDLRLPSRAWKVKLVGEGADDAGGVFDDTIT 59

Query: 259 EMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRT 318
           EMC EL +G V LL+ +PN  A+ GYNRDR++ NP      + LM FKFLGIL GVAIRT
Sbjct: 60  EMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQFKFLGILMGVAIRT 118

Query: 319 KKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE 378
           KKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I  SG+TE +F E+IPL+
Sbjct: 119 KKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDSGITEESFHEMIPLD 178

Query: 379 CFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDY 438
            F G S  G++ PI+ GG S+PLTF+NR +Y E AI                Y     D 
Sbjct: 179 SFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE---------------YRLHEMDR 223

Query: 439 GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                   M+W VP  +++ L    +E + CG+
Sbjct: 224 QVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 256


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 151/408 (37%), Positives = 226/408 (55%), Gaps = 27/408 (6%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I+DI+VG  ++LA+ N+G ++ WG N + QLG+G    +  PQLV   S  NI ++SAG 
Sbjct: 585 IIDIAVGCNYILALDNSGNIWGWGTNEEGQLGIGTTNPHYLPQLVCTFSGTNITRLSAGT 644

Query: 77  SHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSDL 136
           +H AAW+    P      + ++ L++G P  IP  Y  L N  + LIR R  +L  FSD+
Sbjct: 645 THCAAWSNSQSP------SSNTQLQIGTPNAIPSSYKSLCNVEVELIRDRFYVLWTFSDM 698

Query: 137 IYQVVRLLPLGNVDQDWVQCTPYSWLV---HPSLRPLFAPRVYTLPLVRSVGKTMLVGKN 193
           + Q   LL L  ++      TP SWL       LR L   R + LPL+R++  T L  K 
Sbjct: 699 VLQTWNLLSLIRLET-----TPQSWLYLFEDGVLRTLLTRRAHALPLIRALRSTFLKSK- 752

Query: 194 FGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVF 253
             P +TV+R  T  +Q  + +F Q++ QV+    SD  +  R WK+KLL E ADDAGGVF
Sbjct: 753 LQPQITVKRFDTSGEQ-CETVFKQVADQVLSFALSDSIMLVREWKIKLLNEAADDAGGVF 811

Query: 254 DDTITEMCGELLSGA------VPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKF 307
           D+  T+MC EL            LLV TPN   + G+N+D++I+N  ++ S ++L ++KF
Sbjct: 812 DEISTQMCMELEGNCGNCIKLFKLLVPTPNMAVENGFNQDQFIVNTSIT-SPETLKYYKF 870

Query: 308 LGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVT 367
           LGIL G+A+   KPL L L+P VWK +V   VT  D+ + D+++ Q +  ++ I LS   
Sbjct: 871 LGILMGIALLNHKPLHLHLAPCVWKQLVGIKVTLNDVAEVDSMFLQCISMLKSITLSD-- 928

Query: 368 EANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIA 415
             N    +PL  +   +  G + P++ GG+   L   +   Y E AI+
Sbjct: 929 --NDNVTMPLMTYVCQTSDGDLKPLIPGGEIKILQKNDCSIYIEKAIS 974



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 66/91 (72%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           +CGFKHSAV+T +G ++TFG G YG LG G     K P+ +++L   H+  ++CG +HT+
Sbjct: 432 SCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTL 491

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +A+ GK +YA+GDGE+GKLGLG+T ++  P
Sbjct: 492 ALANNGKKLYAWGDGEFGKLGLGSTSVRSIP 522



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
           G  H+  V  +G ++++G+GDYG+LGHG +   + P++++AL   HV   SCG  H+  +
Sbjct: 382 GDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVL 441

Query: 477 ADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              GK V+ FG G+YG LG G    + TPQ
Sbjct: 442 TKDGK-VFTFGQGQYGILGDGGNSPQKTPQ 470



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--- 470
           I CG   + ++ +NG ++  G G YGRLG GT+ +      +  L    +  ++  L   
Sbjct: 324 IVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGD 383

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT+ +AD G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 384 GHTLAVADSGE-VFSWGDGDYGKLGHGNSERQRKPK 418



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG K S V+ +NGYLYTFG+ D+  +     ++  +P+ V +L    +  ++ G N+ 
Sbjct: 536 IACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYI 595

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + + + G  ++ +G  E G+LG+G T     PQ
Sbjct: 596 LALDNSGN-IWGWGTNEEGQLGIGTTNPHYLPQ 627



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 4/91 (4%)

Query: 412 AAIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + IACG  H+  + +NG  LY +G+G++G+LG G+T    +P  V +   V ++ ++CG 
Sbjct: 481 SQIACGKDHTLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGS 540

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGL 501
             ++ +A  G  +Y FG  ++  LG+  T L
Sbjct: 541 KFSIVLATNG-YLYTFGHKDF--LGIAETDL 568



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 39/61 (63%)

Query: 23  GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAW 82
           G  H LAV+++G+VF+WG+    +LG GN    R+P+ ++AL  +++ Q S G  HSA  
Sbjct: 382 GDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVL 441

Query: 83  T 83
           T
Sbjct: 442 T 442



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I A +  H+V  S G +H   ++  G+VF +G      LG G     + PQL+L+L N
Sbjct: 418 KQIIALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKN 477

Query: 67  KNIRQVSAGRSHSAA 81
           ++I Q++ G+ H+ A
Sbjct: 478 EHISQIACGKDHTLA 492



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I + KN HI  I+ G +H LA++N G+ ++AWG+    +LGLG+      P LV +  N 
Sbjct: 472 ILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNV 531

Query: 68  NIRQVSAGRSHS 79
            +++++ G   S
Sbjct: 532 CLKKIACGSKFS 543


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 143/418 (34%), Positives = 222/418 (53%), Gaps = 34/418 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +N  ++D++ G+ H +A ++TG+VF+WG+N + QLG G     + P+LV +L  
Sbjct: 4750 RKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQRPRLVASLLG 4809

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG-LPQDIPDHYGHLQNKPLPLIRA 125
            K I +V+ G +HS AW+             + ++  G LP DIP  Y HLQN P+  +R 
Sbjct: 4810 KKINRVACGSAHSLAWST------------NKAVSAGKLPSDIPMEYNHLQNIPITALRN 4857

Query: 126  RLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            RL LL+ FSDL    + +  L N  Q  V+    + L   +LR +    V      + V 
Sbjct: 4858 RLILLHHFSDLFCPSIPMFDLQNRSQLEVRNDIITGL--DNLRGVIVSSVKEAAFRKVVQ 4915

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  K  GP V + RL  K  ++          K +F Q++ ++       L LP R 
Sbjct: 4916 ATMVRDKQHGPVVELNRLQVKRARSKGGYSGPDGTKSVFGQMASKLSSFGADSLMLPHRV 4975

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + +++ EMC EL +G++PLL+ TPNG  ++G NRD YI NP ++
Sbjct: 4976 WKVKFVGESVDDCGGGYSESVAEMCDELQNGSLPLLIVTPNGRGESGANRDCYIFNP-MA 5034

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
            +S   +  FKFLG+LFG+AIRT  PL L ++  VWK +   P++ +DL + D      L 
Sbjct: 5035 KSPVHVNMFKFLGMLFGIAIRTGSPLSLNIAEPVWKQVAGMPLSVSDLAEIDKDCVPGLI 5094

Query: 357  AIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             I+D+    +   + P  IP    +    + + + I         T AN+++Y + AI
Sbjct: 5095 YIKDLTDDKLQTVDMPFSIPSSSGQEVQLSSKHSKI---------TPANKMEYIKQAI 5143



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TSNG LYT+G G+YGRLGHG       P++V AL    V  V+CG    
Sbjct: 3609 IACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDA 3668

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+ + D+GK VY++GDG++GKLG G +
Sbjct: 3669 QTLALTDEGK-VYSWGDGDFGKLGRGGS 3695



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T+NG LYT+G G YGRLGHG + +   P+ V AL    V  ++CG    
Sbjct: 4605 IAAGGAHSACITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDA 4664

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+CI D    V+++GDG+YGKLG G +
Sbjct: 4665 QTLCITDDDN-VWSWGDGDYGKLGRGGS 4691



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 7/156 (4%)

Query: 354  SLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRI-TPIVTGGQSVPLTFANRLQYY- 410
            +L A+R + + G +++ F      + +  G +  GR+   I TG  SVP    +  QY  
Sbjct: 3493 NLSALRCVQIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVI 3552

Query: 411  -EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
             + A+  G +HS  +T++G ++++G GD G+LGH +  N   P  + AL    V  ++CG
Sbjct: 3553 KKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACG 3612

Query: 470  LNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
             +H+  I   G  +Y +G GEYG+LG G+  T LKP
Sbjct: 3613 SSHSAAITSNGD-LYTWGLGEYGRLGHGDNTTQLKP 3647



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 5/98 (5%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I CG  +S  +TSNG +Y++G G++GRLGHG++ +   P  +       +  V+CG  
Sbjct: 674 AKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSG 733

Query: 472 --HTVCIADKGKAVYAFGDGEYGKLGL-GNTGLKPTPQ 506
              T+ + D G AVY++GDG+YGKLG  GN G K TP+
Sbjct: 734 DAQTLAVTDSG-AVYSWGDGDYGKLGRGGNDGCK-TPK 769



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+            + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4691 SDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPR 4750

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V AL    V  V+CG  H V   D G+ V+++GD + G+LG G T     P+
Sbjct: 4751 KVSALQNKKVIDVACGSLHCVACTDTGE-VFSWGDNDEGQLGDGTTNAIQRPR 4802



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 1/87 (1%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           KH   +TS+G ++++GNGD G+LGHG   N + P  +  L+   V  + CG +++V +  
Sbjct: 629 KHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTS 688

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ VY++G G +G+LG G++  + TP
Sbjct: 689 NGE-VYSWGKGNFGRLGHGSSEDQTTP 714



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT  + + P+ V  L    +  V+ G  H 
Sbjct: 3715 IECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHC 3774

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ V+A+GD ++G+ G G T +   P
Sbjct: 3775 LAVTDSGQ-VFAWGDNDHGQQGNGTTTVNRKP 3805



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 6/110 (5%)

Query: 397  QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
            +S+   F  +L     A+  G KH   +++ G +Y++G G+ G+LGHG       P  + 
Sbjct: 4541 ESIQHVFIKKL-----AVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVID 4595

Query: 457  ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +L    V  ++ G  H+ CI   G+ +Y +G G YG+LG G++  +P P+
Sbjct: 4596 SLRGKEVVDIAAGGAHSACITANGE-LYTWGKGRYGRLGHGDSEDQPRPK 4644



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 1/79 (1%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   K   IV ++VG  H LAV+++GQVFAWG+N   Q G G     R+P LV+ L    
Sbjct: 3756 VEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALVV-LEGYK 3814

Query: 69   IRQVSAGRSHSAAWTAPPL 87
            I +V+ G SHS AW    +
Sbjct: 3815 ISKVACGSSHSIAWATTDM 3833



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 46/78 (58%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I A  +  + DI++G+ H +A++  G+++ WG N   QLG  +  N+ EP L+  +  
Sbjct: 821 KQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEG 880

Query: 67  KNIRQVSAGRSHSAAWTA 84
           KNI  V+ G + + AWT+
Sbjct: 881 KNIIGVACGPTQTFAWTS 898



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 1/82 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +YT+G GD  RLGHGT  + + P+++ AL+   V+ ++ G  H 
Sbjct: 782 VYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHC 841

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           + I + G+ +Y +G  E G+LG
Sbjct: 842 MAITEDGE-LYGWGRNEQGQLG 862



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I +     I  ++V  G  H LA++  G+VF+WG   D +LG  ++ N  +P+L+ AL
Sbjct: 3542 RQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEAL 3601

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
             +K +R ++ G SHSAA T+
Sbjct: 3602 KSKRVRDIACGSSHSAAITS 3621



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 3/92 (3%)

Query: 409  YYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y    +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++  L    V  V
Sbjct: 4652 YRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKV 4711

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             CG   +V +   G +VY +G G+Y +LG G+
Sbjct: 4712 ECGSQFSVALTKSG-SVYTWGKGDYHRLGHGS 4742



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G +Y++G+GD+G+LG G +    VP  V  L    V  + CG  
Sbjct: 3661 VACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQ 3720

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 3721 FSLALTKSGQ-VWTWGKGDYFRLGHGTDAHVRKPQ 3754



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVP--LTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q+ P  L F    +  + A   G   +  VT +G +Y++G+GDYG+LG G
Sbjct: 701 GRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRG 760

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
                K P+ +  L    V  V CG   ++ +   G AVY +G G+  +LG G
Sbjct: 761 GNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSG-AVYTWGKGDNYRLGHG 812



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 2/79 (2%)

Query: 8    HIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
             + + +++ I  ++V  G +H LA+S  G+V++WG   D +LG GN+     P+++ +L 
Sbjct: 4539 QLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIDSLR 4598

Query: 66   NKNIRQVSAGRSHSAAWTA 84
             K +  ++AG +HSA  TA
Sbjct: 4599 GKEVVDIAAGGAHSACITA 4617



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 38/60 (63%)

Query: 25  EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
           +H + +++ G+VF+WGN    +LG G+  N+ EP L+  LS K + ++  G S+S A T+
Sbjct: 629 KHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTS 688



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G ++P      ++  +  I  G +  LA++ +GQV+ WG     +LG G   + R+P
Sbjct: 3694 GSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKP 3753

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
            Q+V  L  K I  V+ G  H  A T
Sbjct: 3754 QIVEGLKGKKIVHVAVGALHCLAVT 3778



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A K+  + DI+ G+ H  A+++ G ++ WG     +LG G+     +P+ V AL++
Sbjct: 3596 RLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQLKPKQVKALAH 3655

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3656 ERVVQVACG 3664



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 39/67 (58%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +  G +  +A++ +G V+ WG   + +LG G + + R P+ + ALS+K ++ ++ G 
Sbjct: 779 VVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGS 838

Query: 77  SHSAAWT 83
            H  A T
Sbjct: 839 LHCMAIT 845



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG  H    T  G ++++G+ D G+LG GTT   + P  V +L    +  V+CG  H+
Sbjct: 4763 VACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQRPRLVASLLGKKINRVACGSAHS 4822

Query: 474  VCIADKGKAVYA 485
            +  +   KAV A
Sbjct: 4823 LAWS-TNKAVSA 4833



 Score = 45.4 bits (106), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 12  FKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           FK   IVD++ G+     LAV+++G V++WG+    +LG G     + P+++  L  +++
Sbjct: 720 FKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDV 779

Query: 70  RQVSAGRSHSAAWT 83
            +V  G   S A T
Sbjct: 780 VRVYCGNQFSMALT 793



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G ++ +G+ D+G+ G+GTT   + P  VV L    +  V+CG +H+
Sbjct: 3767 VAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALVV-LEGYKISKVACGSSHS 3825

Query: 474  VCIADKGKAV 483
            +  A    +V
Sbjct: 3826 IAWATTDMSV 3835



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 36/69 (52%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + +   +VDI+ G  H   ++  G+++ WG     +LG G+  +   P+LV AL +
Sbjct: 4592 RVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKS 4651

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4652 YRVVDMACG 4660



 Score = 38.5 bits (88), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 2/77 (2%)

Query: 9    IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + A K+  +VD++ G+     L +++   V++WG+    +LG G     + P  +  L  
Sbjct: 4646 VEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQG 4705

Query: 67   KNIRQVSAGRSHSAAWT 83
            + + +V  G   S A T
Sbjct: 4706 QGVMKVECGSQFSVALT 4722


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/423 (34%), Positives = 218/423 (51%), Gaps = 48/423 (11%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + I A +   I+ I+ G+ H +A S+ G+VF WG+N + QLG G       P+LV+ L  
Sbjct: 4257 KKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQG 4316

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNI +V+ G +HS AW+           T  S+    LP D P  Y  +++  LP +R R
Sbjct: 4317 KNINRVACGSAHSLAWS-----------TNKSTSATHLPVDAPMEYDLVRDISLPTLRNR 4365

Query: 127  LKLLNRFSDLIYQVVRLLPL---GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRS 183
            L LL+ FS+L+   V + P+   G++DQ               LR +    V      + 
Sbjct: 4366 LVLLHHFSELVSPNVAMFPMEGEGSLDQ---------------LRDILVYSVKEATFRKV 4410

Query: 184  VGKTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPS 234
            +  TM+  K  GP + + R+  K  ++         +K +F Q+  ++  +    L LP 
Sbjct: 4411 IQTTMVRDKQHGPVIELNRIQVKRSRSKGGLAGPDGMKSVFGQMVNKMSLLTQESLFLPH 4470

Query: 235  RAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPD 294
            R WKVK +GE  DD GG + ++I EMC EL +G++PLL+ TPNG  DTG NRD ++LNP+
Sbjct: 4471 RVWKVKFVGESVDDCGGGYSESIAEMCDELQNGSLPLLIVTPNGRDDTGTNRDCFLLNPN 4530

Query: 295  LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQS 354
             +++   L  FKFLGIL G+AIRT  PL L L+  VWK +    +T  DL + D  Y   
Sbjct: 4531 -AKTTHHLQMFKFLGILMGIAIRTGSPLSLNLAEPVWKQLAGMTLTPADLTEIDRDYVPG 4589

Query: 355  LRAIRDIHLSGVTEANFPEI-IPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAA 413
            L  IRD+  S   E  F  + +P   F   S +G   P+ T  + V  T  NR +Y   A
Sbjct: 4590 LLCIRDMDPS---EKVFQTLEMP---FSTPSASGVDVPLSTRYRYV--TIDNRQEYVRLA 4641

Query: 414  IAC 416
            + C
Sbjct: 4642 LNC 4644



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA VT+ G +YT+G G YGRLGHG + +   P+ V  L    V  ++CG    
Sbjct: 4112 IACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDA 4171

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+CI D    V+++GDG+YGKLG G +
Sbjct: 4172 QTLCITDDDN-VWSWGDGDYGKLGRGGS 4198



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 93/163 (57%), Gaps = 14/163 (8%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVPLTFA 404
            +Y++SL A++ IH++G +++ F  I+  +     C EG +  GR+    +   + P    
Sbjct: 3010 VYSESLTALKPIHIAGGSKSLF--IVSYDGKLYACGEGTN--GRLGLGHSNNVATPCQLT 3065

Query: 405  NRLQYY--EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
            +  QY   + A+  G KH+  +T +G ++++G G+ G+LGH   ++   P+ + AL    
Sbjct: 3066 SLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKR 3125

Query: 463  VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            +  ++CG +H+  I+  G+ ++ +G GEYG+LG G+  T L+P
Sbjct: 3126 IRDIACGSSHSAAISSTGE-LFTWGLGEYGRLGHGDNLTQLRP 3167



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA ++S G L+T+G G+YGRLGHG  +    P+ V AL   H+  V+CG    
Sbjct: 3129 IACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDA 3188

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+ ++ +G  V+++GDG++GKLG G +
Sbjct: 3189 QTLALSAEG-LVFSWGDGDFGKLGRGGS 3215



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G +YT+G GDY RLGHG+  + + P  V +L++  +  V+ G  H 
Sbjct: 3235 IECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHC 3294

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +C  D+G+ VYA+GD ++G+ G G   +   P
Sbjct: 3295 LCATDQGQ-VYAWGDNDHGQQGNGTILVNRKP 3325



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  +P+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P+
Sbjct: 4198 SDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPK 4257

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            ++ AL    +  ++ G  H V  +D G+ V+ +GD + G+LG G
Sbjct: 4258 KIAALQGKKIICIATGSLHCVACSDLGE-VFTWGDNDEGQLGDG 4300



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 3/77 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           I+CG  +SA VTS+G +YT+G G+YGRLGHGT+ +  VP  VV L    +  ++CG    
Sbjct: 578 ISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDA 637

Query: 472 HTVCIADKGKAVYAFGD 488
            T+ + + G  V+++GD
Sbjct: 638 QTLAVTNTG-LVFSWGD 653



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 2/87 (2%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            + +     IV ++VG  H L  ++ GQV+AWG+N   Q G G  +  R+P LVL L    
Sbjct: 3276 VESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVR 3335

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHT 95
            + +V+ G SHS AWT      H P  T
Sbjct: 3336 VNRVACGSSHSIAWTTS--DTHAPNMT 3360



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           KHS  ++ +G +Y++GNGD GRLGHG   +   P ++  L   +V  +SCG  ++  +  
Sbjct: 531 KHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVTS 590

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ VY +G G YG+LG G +     P
Sbjct: 591 SGE-VYTWGRGNYGRLGHGTSEDHTVP 616



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 1/96 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++++G +Y++G GD G+LGHG       P+ + AL    +  ++CG 
Sbjct: 4057 KVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGG 4116

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H+  +   G+ +Y +G G YG+LG G++  +  P+
Sbjct: 4117 AHSAAVTAGGE-IYTWGKGRYGRLGHGDSEDQMKPK 4151



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 8/107 (7%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  ++VG+ HVLA+++ G+V+ WG N + Q+G  ++ N  EP L+  L  KNI  +  G 
Sbjct: 733 IKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGP 792

Query: 77  SHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLI 123
           + S AW++         +T S +LR+    DI +      N+ L ++
Sbjct: 793 NQSIAWSS--------SNTYSINLRVAFVVDICEETFCCLNQLLMVV 831



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 406 RLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
           +LQ  E A + CG + S  +T +G +YT+G GD  RLGHG+  + + P+ V  LN   ++
Sbjct: 675 KLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIK 734

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            V+ G  H + + D G+ VY +G  + G++G
Sbjct: 735 KVAVGSGHVLALTDDGE-VYGWGRNDNGQVG 764



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S  G+V++WG   D +LG GN+     PQL+ AL  K I  ++ 
Sbjct: 4055 IKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIAC 4114

Query: 75   GRSHSAAWTA 84
            G +HSAA TA
Sbjct: 4115 GGAHSAAVTA 4124



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   K+P ++ +L  + V  V CG  
Sbjct: 4164 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQ 4223

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G +VY +G G+Y +LG G+
Sbjct: 4224 FSVALTRSG-SVYTWGKGDYHRLGHGS 4249



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 43/67 (64%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V +  G +H +A++  G+VF+WG   D +LG  N+++   P+++ AL +K IR ++ 
Sbjct: 3072 IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIAC 3131

Query: 75   GRSHSAA 81
            G SHSAA
Sbjct: 3132 GSSHSAA 3138



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 55/94 (58%), Gaps = 3/94 (3%)

Query: 407  LQYYEAAIACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            L ++   +ACG +   +  +++ G ++++G+GD+G+LG G +    +P  +  LN + V 
Sbjct: 3174 LGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVC 3233

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             + CG   ++ +   G+ VY +G G+Y +LG G+
Sbjct: 3234 MIECGAQFSLALTKFGQ-VYTWGKGDYFRLGHGS 3266



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 41/69 (59%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + I A K+  I DI+ G+ H  A+S+TG++F WG     +LG G+ +    P+LV AL  
Sbjct: 3116 KMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLG 3175

Query: 67   KNIRQVSAG 75
             +I QV+ G
Sbjct: 3176 HHIVQVACG 3184



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   ++I +  +  G++  LA++ +G V+ WG   + +LG G++ + R P+LV  L+ K 
Sbjct: 673 IEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKC 732

Query: 69  IRQVSAGRSHSAAWT 83
           I++V+ G  H  A T
Sbjct: 733 IKKVAVGSGHVLALT 747



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H    T  G +Y +G+ D+G+ G+GT +  + P  V+ L  V V  V+CG +H+
Sbjct: 3287 VAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHS 3346

Query: 474  V 474
            +
Sbjct: 3347 I 3347



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G  IP        + +  I  G +  LA++  GQV+ WG     +LG G+  + R+P
Sbjct: 3214 GSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVRKP 3273

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
             LV +LS K I  V+ G  H    T
Sbjct: 3274 TLVESLSEKKIVHVAVGALHCLCAT 3298



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 36/60 (60%)

Query: 25  EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
           +H LA+S  G V++WGN    +LG G+  +  +P  +  L  KN+  +S G ++SAA T+
Sbjct: 531 KHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVTS 590



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +   +VP        Y+   IACG     +  VT+ G ++++G+G YG+LG G
Sbjct: 603 GRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTG 662

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G +VY +G G+  +LG G+
Sbjct: 663 GSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSG-SVYTWGKGDNHRLGHGS 715



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 35/67 (52%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I A +   IVDI+ G  H  AV+  G+++ WG     +LG G+  +  +P+LV  L    
Sbjct: 4101 IDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFK 4160

Query: 69   IRQVSAG 75
            +  ++ G
Sbjct: 4161 VIDIACG 4167



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINY 55
           GTS  H     +   K+  IVDI+ G+     LAV+NTG VF+WG+    +LG G     
Sbjct: 608 GTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGS 667

Query: 56  REPQLVLALSNKNIRQVSAGRSHSAAWT 83
           + P+L+  L +  + +V  G   S A T
Sbjct: 668 KTPKLIEKLQDIEVARVYCGSQFSLALT 695



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
             IA G  H    +  G ++T+G+ D G+LG GT      P  VV L   ++  V+CG  H
Sbjct: 4269 CIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAH 4328

Query: 473  TV 474
            ++
Sbjct: 4329 SL 4330



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           +++ IS G  +  AV+++G+V+ WG  +  +LG G   ++  P LV+ L +  I  ++ G
Sbjct: 574 NVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACG 633


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 209/418 (50%), Gaps = 34/418 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R     +   IV I+ G+ H +A ++ G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4225 RRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4284

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +HS AW+     P   G          LP  IP  Y  LQ+ P+ ++R R
Sbjct: 4285 KKINRVACGSAHSLAWSTNK--PVNAGK---------LPAQIPMEYNSLQSLPINVLRNR 4333

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHP-SLRPLFAPRVYTLPLVRSVG 185
            L LL+  SDL    +   P+ +++Q        S +  P +LR +           + V 
Sbjct: 4334 LVLLHHISDLFCPCI---PMFDLEQSEAVDMATSAVSSPDALRGVLVSSAKETAFRKVVQ 4390

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP + + R+  K  ++         +K +F QI  ++       L LP R 
Sbjct: 4391 ATMVRDRQHGPVIEINRIQVKRSRSKGGLAGPDGMKSVFGQICAKMSLFTSECLMLPHRV 4450

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G+VPLL++TPNG  ++G NRD +ILNP   
Sbjct: 4451 WKVKFIGESVDDCGGGYSESIAEICDELQNGSVPLLIQTPNGRDESGSNRDCFILNPTTK 4510

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              +   M F+FLGIL G+A+RT  PL L L+  VWK +   P++ +DL + D  Y   L 
Sbjct: 4511 SPIHQNM-FRFLGILLGIAVRTGSPLSLNLAEPVWKQLAGMPLSVSDLTEIDKDYVPGLM 4569

Query: 357  AIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             I+D+    +  A+ P       F   S  G    + +  Q +  T  NR +Y   A+
Sbjct: 4570 CIKDMDEDVLRAADMP-------FSTPSAAGNEIHLSSKHQKI--TLENRAEYVRLAL 4618



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +TS G LY++G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 4080 IAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDA 4139

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+CI D   +V+++GDG+YGKLG G +
Sbjct: 4140 QTLCITDD-DSVWSWGDGDYGKLGRGGS 4166



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           +ACG  HSA +T++G L+T+G G +GRLG G+T +   P  V  L  V V  V+CG    
Sbjct: 535 VACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDA 594

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            T+ +AD G +VY++GDGEYGKLG G +
Sbjct: 595 QTIALADTG-SVYSWGDGEYGKLGRGGS 621



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA + SNG LYT+G G+YGRLGHG       P+ V AL    V  V+ G    
Sbjct: 3059 IACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDA 3118

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+ + D G  VY++GDG++GKLG G +
Sbjct: 3119 QTLALTDSG-TVYSWGDGDFGKLGRGGS 3145



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GDY RLGHGT  + + P R   L    + S++CG  H 
Sbjct: 4186 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHC 4245

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V   D G+ VY +GD + G+LG G T     P+
Sbjct: 4246 VACTDAGE-VYTWGDNDEGQLGDGTTNAIQRPR 4277



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG ++SA V  NG ++T+GNG+  +LGHGT  + + P +V  L   HV S+S G +H 
Sbjct: 641 VYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHC 700

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +   ++G+ + ++G  + G+LG G+TGLK  P
Sbjct: 701 LATTEEGE-LLSWGRNDKGQLGEGHTGLKAEP 731



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 6/127 (4%)

Query: 382  GASWTGRITPIVTGG---QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDY 438
            G +  GR+   ++ G   Q   LT  ++    + A+  G +H+  +T +G ++++G GD 
Sbjct: 2972 GEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3031

Query: 439  GRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            G+LGH + MN   P  + AL    V  ++CG +H+  I   G  +Y +G GEYG+LG G+
Sbjct: 3032 GKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGD-LYTWGLGEYGRLGHGD 3090

Query: 499  --TGLKP 503
              T L+P
Sbjct: 3091 NTTQLRP 3097



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           H   +TS G +Y++GNGD+G+LGHG T+    P  +  L+   V +V+CG +H+  I   
Sbjct: 489 HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITAS 548

Query: 480 GKAVYAFGDGEYGKLGLGNTGLKPTP 505
           G+ ++ +G G +G+LGLG+T    TP
Sbjct: 549 GE-LFTWGRGSFGRLGLGSTEDILTP 573



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT  + + P+ V  L    V  V+ G  H 
Sbjct: 3165 IECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHC 3224

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G   T +   P
Sbjct: 3225 LSVLDNGQ-VYAWGDNDHGQQGNSTTTVNRKP 3255



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + AI  G KH   +++ G +Y++G G+ G+LGHG       P  + +L    V  ++ G 
Sbjct: 4025 KVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGG 4084

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H+ CI   G+ +Y++G G YG+LG G++  +  P+
Sbjct: 4085 AHSACITSTGE-LYSWGKGRYGRLGHGDSEDQTKPK 4119



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)

Query: 409  YYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y    +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ AL  + V  V
Sbjct: 4127 YRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKV 4186

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             CG   +V +   G AVY +G G+Y +LG G 
Sbjct: 4187 ECGSQFSVALTKSG-AVYTWGKGDYHRLGHGT 4217



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 39/74 (52%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   K   +  ++VG  H L+V + GQV+AWG+N   Q G       R+P LV  L    
Sbjct: 3206 VETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRKPALVQGLEGCK 3265

Query: 69   IRQVSAGRSHSAAW 82
            I +V+ G SHS AW
Sbjct: 3266 ISRVACGSSHSIAW 3279



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 43/67 (64%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V +  G  H +A++  G+VF+WG   D +LG  +++N  +P+L+ AL +K +R ++ 
Sbjct: 3002 IKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIAC 3061

Query: 75   GRSHSAA 81
            G SHSAA
Sbjct: 3062 GGSHSAA 3068



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)

Query: 423  VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKA 482
             +T +G +Y++G+GD+G+LG G +    VP  +  LN V V  + CG   ++ +   G+ 
Sbjct: 3122 ALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQ- 3180

Query: 483  VYAFGDGEYGKLGLGNTGLKPTPQ 506
            V+ +G G+Y +LG G       PQ
Sbjct: 3181 VWTWGKGDYFRLGHGTDAHVRKPQ 3204



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 3/87 (3%)

Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG     +  +   G +Y++G+G+YG+LG G +   K P+ V  L  + V  V CG  
Sbjct: 587 VACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQ 646

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           ++  +   G AV+ +G+GE  KLG G 
Sbjct: 647 YSAAVCKNG-AVFTWGNGEGYKLGHGT 672



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 3/106 (2%)

Query: 5   SGRHIPAFKNIHIVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           S   I    +I I+ ++  +E  H LA+++ G V++WGN    +LG G+ +    P L+ 
Sbjct: 466 SMHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLIN 525

Query: 63  ALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI 108
            L  K++  V+ G  HSAA TA      T G      L LG  +DI
Sbjct: 526 ELHGKSVVNVACGSHHSAAITASG-ELFTWGRGSFGRLGLGSTEDI 570



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 42/70 (60%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V I+ G +H LA+S  G+V++WG   D +LG GN+     P+ + +L  K +  ++A
Sbjct: 4023 IRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAA 4082

Query: 75   GRSHSAAWTA 84
            G +HSA  T+
Sbjct: 4083 GGAHSACITS 4092



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +      H+  +S+G+ H LA +  G++ +WG N   QLG G+     EP    +L  
Sbjct: 680 RQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEPAFAASLLG 739

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTP 96
           K I  ++   + + AW+ P      P   P
Sbjct: 740 KCIIGITCSSAQTFAWSRPSRGTMIPMRIP 769



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IACG  H    T  G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4237 SIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4296

Query: 473  TV 474
            ++
Sbjct: 4297 SL 4298



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 39/69 (56%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + +   +VDI+ G  H   +++TG++++WG     +LG G+  +  +P+LV AL  
Sbjct: 4067 RAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKG 4126

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 4127 YRVTDVACG 4135



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 35/70 (50%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I     + +  I  G +  LA++ +GQV+ WG     +LG G   + R+PQLV  L  K 
Sbjct: 3154 IERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQLVETLKGKK 3213

Query: 69   IRQVSAGRSH 78
            +  V+ G  H
Sbjct: 3214 VTHVAVGALH 3223



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A ++  + DI+ G  H  A+ + G ++ WG     +LG G+      P+LV AL  
Sbjct: 3046 RLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEG 3105

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3106 QRVIQVALG 3114



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   + + +  +  G ++  AV   G VF WGN    +LG G + + R P+ V  L+ K+
Sbjct: 630 VDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKH 689

Query: 69  IRQVSAGRSHSAAWT 83
           +  +S G  H  A T
Sbjct: 690 VTSLSLGSHHCLATT 704



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   V  NG +Y +G+ D+G+ G+ TT   + P  V  L    +  V+CG +H+
Sbjct: 3217 VAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRKPALVQGLEGCKISRVACGSSHS 3276

Query: 474  V--CIAD 478
            +  C  D
Sbjct: 3277 IAWCTLD 3283



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 15  IHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           + +VD++ G+     +A+++TG V++WG+    +LG G     + P+LV  L   ++ +V
Sbjct: 582 VTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRV 641

Query: 73  SAGRSHSAA 81
             G  +SAA
Sbjct: 642 YCGPQYSAA 650



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 34/59 (57%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           +V+++ G+ H  A++ +G++F WG  S  +LGLG+  +   P LV  L    +  V+ G
Sbjct: 532 VVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACG 590


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 142/422 (33%), Positives = 212/422 (50%), Gaps = 39/422 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I+ I+ G+ H +A S+ G+V+ WG+N + QLG G     + P++V AL +
Sbjct: 3470 RKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQD 3529

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG-LPQDIPDHYGHLQNKPLPLIRA 125
            K I  V+ G +H+ AW+             S  L  G LPQ +P  Y  L+   +P+IR 
Sbjct: 3530 KKITNVACGSAHTVAWST------------SKPLHAGRLPQTVPMEYNLLREVNIPVIRN 3577

Query: 126  RLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVH-PSLRPLFAPRVYTLPLVRSV 184
            RL LL+ FS+L    + +  +   D+          LV   +LR L           + V
Sbjct: 3578 RLVLLHHFSELFCPSIPMFDM--RDKQNSSSAGMGILVGIDALRGLLVSSGKEAAFRKVV 3635

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSR 235
              TM+  +  GP + + R+  K  ++          K +F Q   ++ +     L LP R
Sbjct: 3636 QATMVRDRQHGPVIELNRIQVKRSRSKGGLAGLDGTKSVFGQACSKLSQFGADSLLLPHR 3695

Query: 236  AWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDL 295
             WKVK +GE  DD GG + ++I EMC EL +G+VPLLV TPNG  + G NRD +++ P  
Sbjct: 3696 VWKVKFIGESVDDCGGGYSESIAEMCDELQNGSVPLLVLTPNGRDEAGANRDCFLVKPTA 3755

Query: 296  S-ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQS 354
              +S QS+  FKFLGIL G+AIRT  PL L L+  VWK +   P+T  D+ + D  Y   
Sbjct: 3756 RLQSHQSM--FKFLGILMGIAIRTGSPLSLSLAEPVWKQLAGMPLTVADVTEVDKDYVAG 3813

Query: 355  LRAIRDIH--LSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEA 412
            L  IRD+        + + P   P       S TG+  P+ T  +   +T  NR++Y  A
Sbjct: 3814 LMCIRDMESDAEAFNQMDMPYSTP-------SATGQDVPLNT--KYARITADNRMEYVRA 3864

Query: 413  AI 414
            A+
Sbjct: 3865 AL 3866



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 60/95 (63%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--N 471
            IACG  HSA VTS+G LYT+G G YGRLGHG + +   P+   AL    V  V+CG   +
Sbjct: 3325 IACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDS 3384

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+CI+D    V+++GDG+YGKLG G +     PQ
Sbjct: 3385 QTLCISDDDN-VWSWGDGDYGKLGRGGSDGCKVPQ 3418



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA VTS+G LYT+G G+YGRLGHG +     P+ V AL    V  V+CG    
Sbjct: 2350 IACGSSHSAAVTSSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDA 2409

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+ + D+G  VY++GDG++GKLG G +
Sbjct: 2410 QTLTLTDEG-MVYSWGDGDFGKLGRGGS 2436



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GDY RLGHG+  + + P +V AL    + S++ G  H 
Sbjct: 3431 VECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHC 3490

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V  +D+G+ VY +GD + G+LG G T     P+
Sbjct: 3491 VACSDQGE-VYTWGDNDEGQLGDGTTNAIQRPR 3522



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 5/130 (3%)

Query: 379  CFEGASWTGRITPIVTGGQSVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGNG 436
            C EG +  GR+    +    +P       QY   + A+  G +H+  +T +G ++++G G
Sbjct: 2263 CGEGTN--GRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 2320

Query: 437  DYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
            D G+LGH + MN + P  + AL    +  ++CG +H+  +   G+ +Y +G GEYG+LG 
Sbjct: 2321 DDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGE-LYTWGLGEYGRLGH 2379

Query: 497  GNTGLKPTPQ 506
            G++  +  P+
Sbjct: 2380 GDSTTQLRPK 2389



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 4/157 (2%)

Query: 353  QSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVP--LTFANRLQY 409
            +SL ++R I + G  +  F      + +  G   +GR+    T   S P  L     +  
Sbjct: 3209 ESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHI 3268

Query: 410  YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
             + A+  G KH+  ++  G +Y++G G+ G+LGHG       P  + +L    V  ++CG
Sbjct: 3269 KKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACG 3328

Query: 470  LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              H+ C+   G+ +Y +G G YG+LG G++  +  P+
Sbjct: 3329 GAHSACVTSSGE-LYTWGKGRYGRLGHGDSEDQLRPK 3364



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 43/71 (60%)

Query: 12   FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
             K   I+ ++VG  H LAV++TGQVFAWG+N   Q G G+    ++P LV  L    I +
Sbjct: 2500 LKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKKPALVQGLEGVRITR 2559

Query: 72   VSAGRSHSAAW 82
            V+ G SHS AW
Sbjct: 2560 VACGSSHSTAW 2570



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHGT  + + P+    L    +  V+ G  H 
Sbjct: 2456 IECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHC 2515

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ V+A+GD ++G+ G G+T +   P
Sbjct: 2516 LAVTDTGQ-VFAWGDNDHGQQGDGSTTVNKKP 2546



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)

Query: 403  FANRLQYYEAA-IACGFKHSA--VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
             A+ L+ Y    +ACG   S    ++ +  ++++G+GDYG+LG G +   KVP++V AL+
Sbjct: 3365 MADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALS 3424

Query: 460  KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             + V  V CG   ++ +   G  VY +G G+Y +LG G+
Sbjct: 3425 SIGVCKVECGSQFSIALTKSG-CVYTWGKGDYHRLGHGS 3462



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G +Y++G+GD+G+LG G +    VP  V  LN   V  + CG  
Sbjct: 2402 VACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQ 2461

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 2462 FSLALTKAGQ-VWTWGKGDYFRLGHGTDSHVRKPQ 2495



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 44/70 (62%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +  V +  G  H +A++  G+VF+WG   D +LG  +++N  +P+L+ AL  K IR ++ 
Sbjct: 2293 VKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIAC 2352

Query: 75   GRSHSAAWTA 84
            G SHSAA T+
Sbjct: 2353 GSSHSAAVTS 2362



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 48/78 (61%), Gaps = 2/78 (2%)

Query: 9    IPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + +++HI  ++V  G +H LA+S  G+V++WG   D +LG GN+     P+++ +L  
Sbjct: 3260 LESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRG 3319

Query: 67   KNIRQVSAGRSHSAAWTA 84
            K +  ++ G +HSA  T+
Sbjct: 3320 KEVIDIACGGAHSACVTS 3337



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 3/85 (3%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS--CGL 470
              A G K   VVT+ G +Y  G G  GRLG G++ N  +P++V  L++  V+ V+   G 
Sbjct: 2243 CCAGGSKSLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGG 2302

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLG 495
             H + +   GK V+++G+G+ GKLG
Sbjct: 2303 RHAMALTVDGK-VFSWGEGDDGKLG 2326



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R + A K   I DI+ G+ H  AV+++G+++ WG     +LG G+      P+L
Sbjct: 2331 MNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDSTTQLRPKL 2390

Query: 61   VLALSNKNIRQVSAG 75
            V AL  K + QV+ G
Sbjct: 2391 VKALVGKRVIQVACG 2405



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G +YT+G+ D G+LG GTT   + P  V AL    + +V+CG  H
Sbjct: 3482 SIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAH 3541

Query: 473  TV 474
            TV
Sbjct: 3542 TV 3543



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 36/73 (49%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           ++   A+      +  VT  G L++FGNGDYG+LG G +   K+P+ V  L   H     
Sbjct: 18  KFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVDKLQGQHAVIAC 77

Query: 468 CGLNHTVCIADKG 480
           CG   +V +   G
Sbjct: 78  CGNQFSVILTKTG 90



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 36/70 (51%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G ++ +G+ D+G+ G G+T   K P  V  L  V +  V+CG +H+
Sbjct: 2508 VAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKKPALVQGLEGVRITRVACGSSHS 2567

Query: 474  VCIADKGKAV 483
               A    A+
Sbjct: 2568 TAWATTDTAI 2577



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 34/67 (50%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            ++ I  G +  LA++  GQV+ WG     +LG G   + R+PQ+   L  K I  V+ G 
Sbjct: 2453 VIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGA 2512

Query: 77   SHSAAWT 83
             H  A T
Sbjct: 2513 LHCLAVT 2519



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 19/73 (26%), Positives = 37/73 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + +   ++DI+ G  H   V+++G+++ WG     +LG G+  +   P++  AL  
Sbjct: 3312 RVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKG 3371

Query: 67   KNIRQVSAGRSHS 79
              +  V+ G   S
Sbjct: 3372 YRVIDVACGSGDS 3384



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 11   AFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            A K   ++D++ G+     L +S+   V++WG+    +LG G     + PQ V ALS+  
Sbjct: 3368 ALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIG 3427

Query: 69   IRQVSAGRSHSAAWT 83
            + +V  G   S A T
Sbjct: 3428 VCKVECGSQFSIALT 3442


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/383 (33%), Positives = 196/383 (51%), Gaps = 27/383 (7%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   ++ I+ G+ H +A ++TG+V+ WG+N + QLG G       P+LV AL  
Sbjct: 3643 KRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQG 3702

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP ++P  Y HLQ+ PL   R R
Sbjct: 3703 KKISRVACGSAHTIAWST--CKPVNAGR---------LPDEVPMEYNHLQHIPLAATRNR 3751

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ FS+L    V L  L    ++ +   P   L   +LR +  P        + V  
Sbjct: 3752 LILLHEFSELFCTSVTLFDLDPGHEETLDYGPLVGL--DTLRGVLIPSNKETAFRKVVQT 3809

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP + + R+  K  ++          K +F Q   ++       L LP R W
Sbjct: 3810 TMVRDRQHGPVIELNRIQVKKYRSKGGLAGPDGTKSVFGQACDKMSNFGPESLFLPHRVW 3869

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLS----GAVPLLVRTPNGVADTGYNRDRYILNP 293
            KVK +GE  DD GG + ++I EMC EL +    G++PLL+ TPNG  ++G NRD +ILNP
Sbjct: 3870 KVKFIGESVDDCGGGYSESIAEMCDELQASYHNGSLPLLIVTPNGREESGANRDCFILNP 3929

Query: 294  DLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQ 353
            D + ++  L  F+FLG+L G+AIRT  PL L L+   WK +    +T TDL + D  Y  
Sbjct: 3930 DATSAVH-LGMFRFLGMLIGIAIRTGSPLSLNLAEPTWKQLAGMTLTVTDLAEIDKDYVP 3988

Query: 354  SLRAIRDIHLSGVTEANFPEIIP 376
             L  IRD+  + +   + P   P
Sbjct: 3989 GLMCIRDMDAAALEAMDMPFSTP 4011



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           I+CG  HSA VTS G LYT+G G+YGRLGHG++ +  VP  V  L   H+  V+CG    
Sbjct: 74  ISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDA 133

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT+  AD G  V+++GDG+YGKLG G +     P+
Sbjct: 134 HTLAAADDG-TVWSWGDGDYGKLGRGGSDGCKNPK 167



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            I+CG  HSA +T N  LYT+G G YGRLGHG + +  +P+ V AL    V  V+CG    
Sbjct: 3498 ISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDA 3557

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 3558 QTLCLTDD-DCVWSWGDGDYGKLGRGGS 3584



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 3/98 (3%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IVD++VG  H LAV+++GQVFAWG+N   Q G       R PQLV  L  + 
Sbjct: 2713 VDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLEGQK 2772

Query: 69   IRQVSAGRSHSAAWTAPPLP---PHTPGHTPSSSLRLG 103
            I +V+ G SHS AW    LP    H P   P S   LG
Sbjct: 2773 ITRVACGSSHSIAWAESDLPTPATHEPVMFPVSRDPLG 2810



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            ++CG  HSA + S+G LYT+G G+YGRLGHG       P++V +     V  ++CG    
Sbjct: 2566 MSCGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDA 2625

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+ + D G  V+++GDG++GKLG G +
Sbjct: 2626 QTLALTDDG-TVWSWGDGDFGKLGRGGS 2652



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  +P+   + +    + + CG + S  +T +G +YT+G GDY RLGHG   + + P+
Sbjct: 3584 SDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPK 3643

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            RV AL    V +++ G  H V   D G+ VY +GD + G+LG G T     P+
Sbjct: 3644 RVAALQGKKVITIATGSLHCVASTDTGE-VYTWGDNDEGQLGDGTTNAIARPR 3695



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 5/110 (4%)

Query: 398  SVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
            +VP    N   +   + ++  G +H+  +T  G L+++G G+ G+LGHG  MN   P+ +
Sbjct: 2496 TVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLI 2555

Query: 456  VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
                   V  +SCG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 2556 DTFKSSCVRDMSCGSSHSAAILSSGE-LYTWGLGEYGRLGHGDNYTHLKP 2604



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 1/89 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH+  ++++G +Y++G GD G+LGHG   +   P  + AL    V  +SCG 
Sbjct: 3443 KVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGG 3502

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            +H+ CI  +   +Y +G G YG+LG G++
Sbjct: 3503 SHSACIT-QNHELYTWGKGRYGRLGHGDS 3530



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 1/93 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG + S  ++++G ++T+G GDY RLGHG   + + P+ V  L    +  V+ G  H 
Sbjct: 2672 VACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHC 2731

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + + D G+ V+A+GD ++G+ G   T +   PQ
Sbjct: 2732 LAVTDSGQ-VFAWGDNDHGQQGNNTTTVNRRPQ 2763



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G ++T+G G+  RLGHGT  + + P+ V AL+  HV  VS G  H 
Sbjct: 180 VYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHC 239

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + + D G+ VY +G  + G+LG  +  ++P P
Sbjct: 240 LALTDAGE-VYCWGRNDQGQLGDIDCQIRPEP 270



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           KH   +T  G +Y++G+GD G+LGHG T   + P  V  L    V  +SCG  H+  +  
Sbjct: 27  KHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTS 86

Query: 479 KGKAVYAFGDGEYGKLGLGNT 499
           +G+ +Y +G G YG+LG G++
Sbjct: 87  EGE-LYTWGRGNYGRLGHGSS 106



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A    H+VD+SVG+ H LA+++ G+V+ WG N   QLG  +     EP LV  L++K 
Sbjct: 221 VEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDCQIRPEPTLVSGLASKG 280

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW+ 
Sbjct: 281 IVGIACGPAQSFAWSC 296



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 3/86 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   K+P +V +L  + V  V CG  
Sbjct: 3550 VACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQ 3609

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLG 497
             +V +   G AVY +G G+Y +LG G
Sbjct: 3610 FSVALTRSG-AVYTWGKGDYYRLGHG 3634



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I    +  +  +SV  G  H +A++  G++F+WG   D +LG GN++N   P+L+   
Sbjct: 2499 RQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTF 2558

Query: 65   SNKNIRQVSAGRSHSAA 81
             +  +R +S G SHSAA
Sbjct: 2559 KSSCVRDMSCGSSHSAA 2575



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG +   +  +T +G ++++G+GD+G+LG G +    VP  V  L    V  V+CG  
Sbjct: 2618 IACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQ 2677

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ ++  G  V+ +G G+Y +LG GN      PQ
Sbjct: 2678 FSLALSTSG-LVWTWGKGDYYRLGHGNDTHVRKPQ 2711



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q VP+  +    ++   +ACG    H+     +G ++++G+GDYG+LG G
Sbjct: 99  GRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRG 158

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G +V+ +G GE  +LG G 
Sbjct: 159 GSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDG-SVWTWGKGEGFRLGHGT 211



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 4    TSGRHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
            TS + + + +++ +  ++V  G +H +A+S  G V++WG   D +LG GN+ +   P+++
Sbjct: 3428 TSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVI 3487

Query: 62   LALSNKNIRQVSAGRSHSAAWT 83
             AL  K +  +S G SHSA  T
Sbjct: 3488 EALRGKGVIDISCGGSHSACIT 3509



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 13 KNIHIVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
          +   IV +   T+  H LA++  G+V++WG+    +LG G+     EP LV  L+ K + 
Sbjct: 13 RKCEIVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVI 72

Query: 71 QVSAGRSHSAAWTA 84
          ++S G +HSAA T+
Sbjct: 73 RISCGSTHSAAVTS 86



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 32/61 (52%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            IA G  H    T  G +YT+G+ D G+LG GTT     P  V AL    +  V+CG  HT
Sbjct: 3656 IATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHT 3715

Query: 474  V 474
            +
Sbjct: 3716 I 3716



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 39/77 (50%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I   + + +  +  G +  LA++  G V+ WG     +LG G + + R P+LV AL  
Sbjct: 167 KSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDG 226

Query: 67  KNIRQVSAGRSHSAAWT 83
           K++  VS G  H  A T
Sbjct: 227 KHVVDVSVGSIHCLALT 243



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G  +P      +   +  ++ G +  LA+S +G V+ WG     +LG GN  + R+P
Sbjct: 2651 GSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKP 2710

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
            Q+V  L  K I  V+ G  H  A T
Sbjct: 2711 QIVDGLRGKKIVDVAVGALHCLAVT 2735



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 37/65 (56%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G ++ +G+ D+G+ G+ TT   + P+ V  L    +  V+CG +H+
Sbjct: 2724 VAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLEGQKITRVACGSSHS 2783

Query: 474  VCIAD 478
            +  A+
Sbjct: 2784 IAWAE 2788



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 38/67 (56%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I  FK+  + D+S G+ H  A+ ++G+++ WG     +LG G+   + +P+ V + ++  
Sbjct: 2555 IDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHR 2614

Query: 69   IRQVSAG 75
            +  ++ G
Sbjct: 2615 VIDIACG 2621



 Score = 42.0 bits (97), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   +  HI+D++ G+   H LA ++ G V++WG+    +LG G     + P+ +  L  
Sbjct: 115 VSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQG 174

Query: 67  KNIRQVSAGRSHSAAWT 83
             + +V  G   S A T
Sbjct: 175 LGVCKVYCGAQFSLALT 191



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 34/69 (49%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   ++DIS G  H   ++   +++ WG     +LG G+  +   P++V AL  
Sbjct: 3485 RVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRG 3544

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 3545 NRVIDVACG 3553



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
            ++ IS G+ H  AV++ G+++ WG  +  +LG G+  +   P LV  L   +I  V+ G
Sbjct: 70  QVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACG 129



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 3/72 (4%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALSNKNIRQVS 73
            + +  I+ G++ + AVS+ G+VFA G +++ +LGLG    N   P+ +  LS+  +R+VS
Sbjct: 2454 LKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVS 2513

Query: 74   --AGRSHSAAWT 83
              +G  H+ A T
Sbjct: 2514 VHSGGRHAMALT 2525


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/426 (32%), Positives = 211/426 (49%), Gaps = 34/426 (7%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + A +  +++ I+ G+ H +A ++ G+VF WG+N + QLG G+      P+LV AL  
Sbjct: 591 RKVAALQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQG 650

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
           K I +V+ G +HS AW+     P   G          LP  +P  Y HLQN  +P++R R
Sbjct: 651 KKINRVACGSAHSLAWSTSK--PVNAGK---------LPVQVPMEYNHLQNITMPVLRNR 699

Query: 127 LKLLNRFSDLIYQVVRLLPL--GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSV 184
           L LL+ FSDL    + +  L  G +  D     P   L   +LR +           + V
Sbjct: 700 LVLLHHFSDLFCPSIPMFDLLRGKL-ADENGSKPLVGL--DTLRGVLVSSGKEAAFRKVV 756

Query: 185 GKTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSR 235
             TM+  +  GP + + R+  K  ++         +K +F Q+  ++       L LP R
Sbjct: 757 QATMVRDRQHGPVIELNRIQVKRSRSKGGLAGPDGIKSVFGQMCSKMASFTPDSLLLPHR 816

Query: 236 AWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDL 295
            WKVK +GE  DD GG + ++I EMC EL +G+ PL+  TPNG  ++G NRD +ILNP  
Sbjct: 817 VWKVKFIGESVDDCGGGYSESIAEMCDELQNGSTPLMCLTPNGREESGANRDCFILNPH- 875

Query: 296 SESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSL 355
           ++    +  F+FLGIL G+AIRT  PL L L+  VWK +   P+T TDL + D  Y   L
Sbjct: 876 AKGPTHMNMFRFLGILMGIAIRTGSPLSLNLAEPVWKQLAGMPLTVTDLTEIDKDYVPGL 935

Query: 356 RAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTG------GQSVPLTFANRLQY 409
             IRD+        N P  +P      +    +++P  +        + V L    RL  
Sbjct: 936 MYIRDMEKDSEAFDNPP--MPFSTSSASGDEVKLSPKYSTITPDNRQEYVRLALNYRLHE 993

Query: 410 YEAAIA 415
           +E  +A
Sbjct: 994 FEQQVA 999



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IA G  HSA +TS G L+T+G G YGRLGHG + +   P+ V AL  V V  V+CG    
Sbjct: 446 IAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDA 505

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+CI D   +V+++GDG+YGKLG G +     PQ
Sbjct: 506 QTLCITDD-DSVWSWGDGDYGKLGRGGSDGCKIPQ 539



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 58/93 (62%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +YT+G GDY RLGHG+  + + P +V AL   +V S++ G  H 
Sbjct: 552 VECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVISIATGSLHC 611

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V   D+G+ V+ +GD + G+LG G+T   P P+
Sbjct: 612 VACTDQGE-VFTWGDNDEGQLGDGSTSAIPRPR 643



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
           ++  + A   G   +  +T +  ++++G+GDYG+LG G +   K+P++V AL    V  V
Sbjct: 493 VRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKV 552

Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            CG   +V +   G  VY +G G+Y +LG G+
Sbjct: 553 ECGSQFSVALTKSG-CVYTWGKGDYHRLGHGS 583



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 51/78 (65%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + +++HI  ++V  G +H LA+S+ G+VF+WG   D +LG GN+ +   P+++ +L  
Sbjct: 381 LESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIESLRG 440

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K +  ++AG +HSA  T+
Sbjct: 441 KEVVDIAAGGAHSACITS 458



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G KH   ++S G ++++G  + G+LGHG   +   P  + +L    V  ++ G 
Sbjct: 391 KVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGG 450

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H+ CI   G+ ++ +G G YG+LG G++  +  P+
Sbjct: 451 AHSACITSTGE-LFTWGKGRYGRLGHGDSEDQMKPK 485



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I + +   +VDI+ G  H   +++TG++F WG     +LG G+  +  +P+LV AL  
Sbjct: 433 RVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKG 492

Query: 67  KNIRQVSAG 75
             +  V+ G
Sbjct: 493 VRVIDVACG 501



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 33/62 (53%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IA G  H    T  G ++T+G+ D G+LG G+T     P  V AL    +  V+CG  H
Sbjct: 603 SIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGSAH 662

Query: 473 TV 474
           ++
Sbjct: 663 SL 664



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A K + ++D++ G+     L +++   V++WG+    +LG G     + PQ V AL  
Sbjct: 487 VEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIG 546

Query: 67  KNIRQVSAGRSHSAAWT 83
           + + +V  G   S A T
Sbjct: 547 QGVVKVECGSQFSVALT 563


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 141/417 (33%), Positives = 207/417 (49%), Gaps = 27/417 (6%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I + + + +V++SVG+ H +A  + G V+ WG+N + Q+G G     + P+LV AL   +
Sbjct: 1701 IESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHH 1760

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG--LPQDIPDHYGHLQNKPLPLIRAR 126
            I  VS G +H+ AW+ P     +  H      R G  LP  IP  Y  LQN P  ++R R
Sbjct: 1761 ISHVSCGSAHTVAWSLP-----SESHNMHKRRRTGAKLPDQIPLEYNLLQNIPFTVLRNR 1815

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L +L +FSDL+  V+  LPL N   D          +   LR L       L   + V  
Sbjct: 1816 LIVLTQFSDLLCPVIPFLPLHNAPCDITDSVDTPIPI-DQLRSLLVSSGKELVFKKVVQA 1874

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            +M+  K  GP + + R+  K  +           + +F Q  +++  +    + LP R W
Sbjct: 1875 SMVRDKQHGPIIELNRIQVKRHREKSGLAGPDGSRSVFGQAFQKMDCLLPDSVLLPHRIW 1934

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK LGE  DD GG + ++ITE+C EL +G+VPLL  TPNG  ++G NRD +ILN   S 
Sbjct: 1935 KVKFLGESVDDCGGGYSESITEICDELQNGSVPLLSGTPNGRDESGANRDCFILNSTTSS 1994

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
                 M FKFLGIL G+A+RT  PL + ++  VWK +        D+ + D  +      
Sbjct: 1995 ETHIKM-FKFLGILIGIAMRTGSPLSINMAEPVWKQLAGIKPCLKDISEIDKHFVPKSVF 2053

Query: 358  IRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD       EA+  E + ++ F   S  G   P+ +  Q V  T  NR +Y   AI
Sbjct: 2054 IRDC------EADELESMQIQ-FATHSACGEEIPLGSTHQVV--TAQNRNEYIRLAI 2101



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           I+CG  HSA + S+G LYT+G+G YGRLGHG       P+ V AL+   V  V+CG    
Sbjct: 572 ISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDA 631

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            T+C+   G  VY++GDG++GKLG G +
Sbjct: 632 QTLCLTQDG-LVYSWGDGDFGKLGRGGS 658



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A+  G +H+  +T +G++Y++G+G+ G+LGHG+  +   P ++    +  +  +SCG +H
Sbjct: 519 AVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSH 578

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN--TGLKPTP 505
           +  I   G  +Y +G G YG+LG GN  T LKP P
Sbjct: 579 SAAIGSSG-TLYTWGHGMYGRLGHGNNHTLLKPKP 612



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP      +  +   +ACG + S  ++  G +YT+G GDY RLGHG+  + + P+
Sbjct: 1640 SDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPK 1699

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + +L  + V  VS G  H +   D G  VY +GD + G++G G T     P+
Sbjct: 1700 LIESLRGMKVVEVSVGSLHCIAAVDNGD-VYTWGDNDEGQIGDGTTQATQIPR 1751



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA + + G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 1550 VATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDA 1609

Query: 472  HTVCIAD---KGKAVYAFGDGEYGKLGLGNT 499
             T+CI +       V+++GDG+YGKLG G +
Sbjct: 1610 QTLCITEGTGGSSVVWSWGDGDYGKLGRGGS 1640



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 2/78 (2%)

Query: 9    IPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            I + +++HI  +SV  G +H+LA+SN G+V++WG   D +LG GN+ +   P+++ +L  
Sbjct: 1485 IESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRG 1544

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I +V+ G SHSAA  A
Sbjct: 1545 DLIVKVATGGSHSAAINA 1562



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG + S  ++  G ++T+G GDY RLGHG+  + + P+ V  L +  V  V+ G  H 
Sbjct: 678 IECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHC 737

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + + + G+ V+A+GD ++G+ G G T +   P
Sbjct: 738 LAVTEGGQ-VFAWGDNDHGQQGNGGTTVNRKP 768



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 41/74 (55%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   +VD++VG  H LAV+  GQVFAWG+N   Q G G     R+P  V  L    
Sbjct: 719 VEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVK 778

Query: 69  IRQVSAGRSHSAAW 82
           I +++ G SHS A+
Sbjct: 779 ITKLACGSSHSIAF 792



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 3/95 (3%)

Query: 414 IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG +   +  +T +G +Y++G+GD+G+LG G +    VP+ V  L+   V  + CG  
Sbjct: 624 VACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQ 683

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            ++ ++  G  V+ +G G+Y +LG G+      PQ
Sbjct: 684 FSLALSRCG-LVWTWGKGDYFRLGHGSDQHVRRPQ 717



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++ G  H      NG +YT+G+ D G++G GTT   ++P  V AL   H+  VSCG  HT
Sbjct: 1712 VSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHT 1771

Query: 474  V 474
            V
Sbjct: 1772 V 1772



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 1/69 (1%)

Query: 430  LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
            ++++G+GDYG+LG G +   KVP  +  L   H+  V+CG   ++ ++  G  VY +G G
Sbjct: 1624 VWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAG-GVYTWGKG 1682

Query: 490  EYGKLGLGN 498
            +Y +LG G+
Sbjct: 1683 DYYRLGHGS 1691



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 38/67 (56%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I  + +  G  H +A++  G V++WG+  + +LG G++ +   P+ +     K IR +S 
Sbjct: 515 IKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISC 574

Query: 75  GRSHSAA 81
           G SHSAA
Sbjct: 575 GSSHSAA 581



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I  F    I DIS G+ H  A+ ++G ++ WG+    +LG GN     +P+ V ALS 
Sbjct: 559 RKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSG 618

Query: 67  KNIRQVSAG 75
           + + QV+ G
Sbjct: 619 QQVVQVACG 627



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%)

Query: 354  SLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL-TFANRLQYY- 410
            SL A++ I L G  +  F      + F  G    GR+   +   +SV + T    +Q+  
Sbjct: 1435 SLAALKPIQLVGGEQTLFTVTGEGKVFATGYGAGGRLG--IGSNESVAIPTLIESIQHVH 1492

Query: 411  --EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
              + ++  G KH   +++ G +Y++G G  G+LGHG   +   P  + +L    +  V+ 
Sbjct: 1493 ITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVAT 1552

Query: 469  GLNHTVCIADKGKAVYAFGDGEYGKLG 495
            G +H+  I   G  +Y +G G YG+LG
Sbjct: 1553 GGSHSAAINATG-GLYTWGKGRYGRLG 1578



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)

Query: 424  VTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE--SVSCGLNHTVCIADKGK 481
            VT  G ++  G G  GRLG G+  +  +P  + ++  VH+   SV+ G  H + ++++G+
Sbjct: 1454 VTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1513

Query: 482  AVYAFGDGEYGKLGLGN 498
             VY++G+G  GKLG GN
Sbjct: 1514 -VYSWGEGVDGKLGHGN 1529



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 38/73 (52%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  H   VT  G ++ +G+ D+G+ G+G T   + P +V  L  V +  ++CG +H+
Sbjct: 730 VAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHS 789

Query: 474 VCIADKGKAVYAF 486
           +  AD       F
Sbjct: 790 IAFADTSHEAQTF 802



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 33/67 (49%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V I  G +  LA+S  G V+ WG     +LG G+  + R PQ+V  L    +  V+ G 
Sbjct: 675 VVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGA 734

Query: 77  SHSAAWT 83
            H  A T
Sbjct: 735 LHCLAVT 741


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 141/417 (33%), Positives = 207/417 (49%), Gaps = 27/417 (6%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I + + + +V++SVG+ H +A  + G V+ WG+N + Q+G G     + P+LV AL   +
Sbjct: 1702 IESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHH 1761

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG--LPQDIPDHYGHLQNKPLPLIRAR 126
            I  VS G +H+ AW+ P     +  H      R G  LP  IP  Y  LQN P  ++R R
Sbjct: 1762 ISHVSCGSAHTVAWSLP-----SESHNMHKRRRTGAKLPDQIPLEYNLLQNIPFTVLRNR 1816

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L +L +FSDL+  V+  LPL N   D          +   LR L       L   + V  
Sbjct: 1817 LIVLTQFSDLLCPVIPFLPLHNAPCDITDSVDTPIPI-DQLRSLLVSSGKELVFKKVVQA 1875

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            +M+  K  GP + + R+  K  +           + +F Q  +++  +    + LP R W
Sbjct: 1876 SMVRDKQHGPIIELNRIQVKRHREKSGLAGPDGSRSVFGQAFQKMDCLLPDSVLLPHRIW 1935

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK LGE  DD GG + ++ITE+C EL +G+VPLL  TPNG  ++G NRD +ILN   S 
Sbjct: 1936 KVKFLGESVDDCGGGYSESITEICDELQNGSVPLLSGTPNGRDESGANRDCFILNSTTSS 1995

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
                 M FKFLGIL G+A+RT  PL + ++  VWK +        D+ + D  +      
Sbjct: 1996 ETHIKM-FKFLGILIGIAMRTGSPLSINMAEPVWKQLAGIKPCLKDISEIDKHFVPKSVF 2054

Query: 358  IRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD       EA+  E + ++ F   S  G   P+ +  Q V  T  NR +Y   AI
Sbjct: 2055 IRDC------EADELESMQIQ-FATHSACGEEIPLGSTHQVV--TAQNRNEYIRLAI 2102



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           I+CG  HSA + S+G LYT+G+G YGRLGHG       P+ V AL+   V  V+CG    
Sbjct: 573 ISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDA 632

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            T+C+   G  VY++GDG++GKLG G +
Sbjct: 633 QTLCLTQDG-LVYSWGDGDFGKLGRGGS 659



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A+  G +H+  +T +G++Y++G+G+ G+LGHG+  +   P ++    +  +  +SCG +H
Sbjct: 520 AVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSH 579

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN--TGLKPTP 505
           +  I   G  +Y +G G YG+LG GN  T LKP P
Sbjct: 580 SAAIGSSG-TLYTWGHGMYGRLGHGNNHTLLKPKP 613



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP      +  +   +ACG + S  ++  G +YT+G GDY RLGHG+  + + P+
Sbjct: 1641 SDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPK 1700

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + +L  + V  VS G  H +   D G  VY +GD + G++G G T     P+
Sbjct: 1701 LIESLRGMKVVEVSVGSLHCIAAVDNGD-VYTWGDNDEGQIGDGTTQATQIPR 1752



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA + + G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 1551 VATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDA 1610

Query: 472  HTVCIAD---KGKAVYAFGDGEYGKLGLGNT 499
             T+CI +       V+++GDG+YGKLG G +
Sbjct: 1611 QTLCITEGTGGSSVVWSWGDGDYGKLGRGGS 1641



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 2/78 (2%)

Query: 9    IPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            I + +++HI  +SV  G +H+LA+SN G+V++WG   D +LG GN+ +   P+++ +L  
Sbjct: 1486 IESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRG 1545

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I +V+ G SHSAA  A
Sbjct: 1546 DLIVKVATGGSHSAAINA 1563



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG + S  ++  G ++T+G GDY RLGHG+  + + P+ V  L +  V  V+ G  H 
Sbjct: 679 IECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHC 738

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + + + G+ V+A+GD ++G+ G G T +   P
Sbjct: 739 LAVTEGGQ-VFAWGDNDHGQQGNGGTTVNRKP 769



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 41/74 (55%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   +VD++VG  H LAV+  GQVFAWG+N   Q G G     R+P  V  L    
Sbjct: 720 VEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVK 779

Query: 69  IRQVSAGRSHSAAW 82
           I +++ G SHS A+
Sbjct: 780 ITKLACGSSHSIAF 793



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 3/95 (3%)

Query: 414 IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG +   +  +T +G +Y++G+GD+G+LG G +    VP+ V  L+   V  + CG  
Sbjct: 625 VACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQ 684

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            ++ ++  G  V+ +G G+Y +LG G+      PQ
Sbjct: 685 FSLALSRCG-LVWTWGKGDYFRLGHGSDQHVRRPQ 718



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++ G  H      NG +YT+G+ D G++G GTT   ++P  V AL   H+  VSCG  HT
Sbjct: 1713 VSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHT 1772

Query: 474  V 474
            V
Sbjct: 1773 V 1773



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 1/69 (1%)

Query: 430  LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
            ++++G+GDYG+LG G +   KVP  +  L   H+  V+CG   ++ ++  G  VY +G G
Sbjct: 1625 VWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAG-GVYTWGKG 1683

Query: 490  EYGKLGLGN 498
            +Y +LG G+
Sbjct: 1684 DYYRLGHGS 1692



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 38/67 (56%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I  + +  G  H +A++  G V++WG+  + +LG G++ +   P+ +     K IR +S 
Sbjct: 516 IKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISC 575

Query: 75  GRSHSAA 81
           G SHSAA
Sbjct: 576 GSSHSAA 582



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I  F    I DIS G+ H  A+ ++G ++ WG+    +LG GN     +P+ V ALS 
Sbjct: 560 RKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSG 619

Query: 67  KNIRQVSAG 75
           + + QV+ G
Sbjct: 620 QQVVQVACG 628



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%)

Query: 354  SLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL-TFANRLQYY- 410
            SL A++ I L G  +  F      + F  G    GR+   +   +SV + T    +Q+  
Sbjct: 1436 SLAALKPIQLVGGEQTLFTVTGEGKVFATGYGAGGRLG--IGSNESVAIPTLIESIQHVH 1493

Query: 411  --EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
              + ++  G KH   +++ G +Y++G G  G+LGHG   +   P  + +L    +  V+ 
Sbjct: 1494 ITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVAT 1553

Query: 469  GLNHTVCIADKGKAVYAFGDGEYGKLG 495
            G +H+  I   G  +Y +G G YG+LG
Sbjct: 1554 GGSHSAAINATG-GLYTWGKGRYGRLG 1579



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)

Query: 424  VTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE--SVSCGLNHTVCIADKGK 481
            VT  G ++  G G  GRLG G+  +  +P  + ++  VH+   SV+ G  H + ++++G+
Sbjct: 1455 VTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1514

Query: 482  AVYAFGDGEYGKLGLGN 498
             VY++G+G  GKLG GN
Sbjct: 1515 -VYSWGEGVDGKLGHGN 1530



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 38/73 (52%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  H   VT  G ++ +G+ D+G+ G+G T   + P +V  L  V +  ++CG +H+
Sbjct: 731 VAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHS 790

Query: 474 VCIADKGKAVYAF 486
           +  AD       F
Sbjct: 791 IAFADTSHEAQTF 803



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 33/67 (49%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V I  G +  LA+S  G V+ WG     +LG G+  + R PQ+V  L    +  V+ G 
Sbjct: 676 VVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGA 735

Query: 77  SHSAAWT 83
            H  A T
Sbjct: 736 LHCLAVT 742


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/412 (32%), Positives = 203/412 (49%), Gaps = 43/412 (10%)

Query: 16   HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
            +++DI  G+ H +  + +G+VF+WG+N + Q+G         P+ +    N  I  V+ G
Sbjct: 4135 NVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPKRINITDNICIDHVACG 4194

Query: 76   RSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSD 135
             +HS AW+           +   +L   LP  +P  + HLQ+  LP++R RL LL  FS+
Sbjct: 4195 SAHSIAWS-----------SKQRNLSCPLPAKVPMEFNHLQHFSLPVLRNRLILLQHFSN 4243

Query: 136  LIYQVVRLLPL---GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGKTMLVGK 192
            +  + + L  L    +  QD V+      L    LR +           R +  TM   K
Sbjct: 4244 IFCKSMALFTLHQSTDPSQDSVE------LSTDGLRGIIHSSSKESAFRRVIKATMTQAK 4297

Query: 193  NFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRAWKVKLL 242
              GP + + RL  K  ++             +F Q+  +   +   DL LP R WKVK +
Sbjct: 4298 QHGPVIELNRLQVKRSRSKGTGLAGPDGSMSVFGQMCSKWSILVSDDLLLPHRVWKVKFI 4357

Query: 243  GEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSL 302
            GE  DD GG + ++I EMC EL +G+VPLL++TPNG  DTG NRD +I NP+ + S+  L
Sbjct: 4358 GESVDDCGGGYSESIAEMCDELQNGSVPLLIQTPNGREDTGVNRDCFIFNPEATSSIH-L 4416

Query: 303  MHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIH 362
              F+F G+L G+AIR+  P+ L L+P VWK I  + +T  DL + DT Y Q L  IR+  
Sbjct: 4417 NMFRFFGVLLGIAIRSGAPINLLLAPPVWKQISGQSLTPEDLSEMDTDYVQGLMFIRE-- 4474

Query: 363  LSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
                     PE      F   S +G+  P+ +    V  T  N  +Y+  A+
Sbjct: 4475 --------NPEAFIGIDFSTPSASGKDIPLHSSKTHV--TMNNYQEYFRLAM 4516



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 55/85 (64%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CG  HSA V+ NG L+T+G G  GRLGHG + N   P+ V AL KV +  V+CG  + 
Sbjct: 3069 VSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNA 3128

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
              +A    +++A+GDG +GKLGL +
Sbjct: 3129 HTLAAGDNSLWAWGDGSFGKLGLKD 3153



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 3/104 (2%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T  Q+ P   A         I+ G  HSA VT +G LYT+G G YGRLGHG   +  +P 
Sbjct: 545 TESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPT 604

Query: 454 RVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLG 495
            V  LN V +  V CG    HT+ + D G+ V+++GDG+YGKLG
Sbjct: 605 IVEGLNGVKIVQVDCGSGDAHTLALDDTGQ-VWSWGDGDYGKLG 647



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 3/109 (2%)

Query: 400  PLT-FANR-LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
            PLT  A R +   + AI  G KH   VT+ G LY +G G+ G+LG GTT+N  VP  + +
Sbjct: 3912 PLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVNMNVPHLIES 3971

Query: 458  LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            L   HV    CG +H+ CI D G ++Y +G G YG+LG  +   +  P+
Sbjct: 3972 LKSKHVIDAGCGSSHSACITDDG-SLYTWGKGRYGRLGHNDHETQHKPK 4019



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 4/90 (4%)

Query: 416  CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN--HT 473
            CG  HSA +T +G LYT+G G YGRLGH        P+ V AL    V  V+CG     T
Sbjct: 3982 CGSSHSACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQT 4041

Query: 474  VCIADKGKAVYAFGDGEYGKLGL-GNTGLK 502
            +C    G  V+++GDG+YGKLG  GN G K
Sbjct: 4042 LCATASG-CVFSWGDGDYGKLGRGGNEGSK 4070



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 59/96 (61%), Gaps = 1/96 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A++C  +H   VT++G ++++G+G YG+LGHG+  ++  P+ +      H+  VSCG 
Sbjct: 3014 KVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGT 3073

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H+  ++  G+ ++ +G G  G+LG G++  +  P+
Sbjct: 3074 GHSAAVSVNGE-LFTWGQGADGRLGHGDSNNQTKPK 3108



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 2/112 (1%)

Query: 396  GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
            G  VP    +    +   + CG + S  +T+ G++YT+G GDY RLGHG   + + P RV
Sbjct: 4068 GSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRV 4127

Query: 456  VA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +  L   +V  + CG  H +   + GK V+++GD + G++G   T     P+
Sbjct: 4128 LGLLAHENVIDIGCGSLHCIVCTESGK-VFSWGDNDEGQIGNDTTQAVSVPK 4178



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 3/96 (3%)

Query: 413  AIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
             +ACG     +   T++G ++++G+GDYG+LG G     KVP+++ +L   HV  + CG 
Sbjct: 4031 CVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGS 4090

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              ++ +   G  VY +G G+Y +LG G+   + TP+
Sbjct: 4091 QFSMALTTAGH-VYTWGKGDYYRLGHGDDSHQRTPR 4125



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 15/94 (15%)

Query: 3    GTSGR-HIPAFKNIHI--------------VDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
            G+SGR  I  F NI +              V +S    HVLAV+  G+VF+WG+    QL
Sbjct: 2985 GSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQL 3044

Query: 48   GLGNQINYREPQLVLALSNKNIRQVSAGRSHSAA 81
            G G+  +Y  P+++     K+IR+VS G  HSAA
Sbjct: 3045 GHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAA 3078



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG   S ++T  G +YT+G G+Y RLG+ +T    +P  V  L    +  V+ G  H 
Sbjct: 3174 IECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHC 3233

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + +   G+ VY++GD E+G+ G  +T     PQ
Sbjct: 3234 LALTSSGE-VYSWGDNEHGQQGNNSTICNRKPQ 3265



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            + I  G +H LAV+  G+++AWG   D +LGLG  +N   P L+ +L +K++     G S
Sbjct: 3926 IAIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSS 3985

Query: 78   HSAAWT 83
            HSA  T
Sbjct: 3986 HSACIT 3991



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            I  ++VG  H LA++++G+V++WG+N   Q G  + I  R+PQ+V +L    I +++ G 
Sbjct: 3223 ITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVASLKGHRICKIACGS 3282

Query: 77   SHSAAWTAPPL 87
            SHS A+    L
Sbjct: 3283 SHSIAFAQGSL 3293



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 40/69 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + I  F+  HI ++S GT H  AVS  G++F WG  +D +LG G+  N  +P+LV AL  
Sbjct: 3056 KMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEK 3115

Query: 67   KNIRQVSAG 75
              I  V+ G
Sbjct: 3116 VRISCVACG 3124



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           H   +T +G +Y++G G  G LG G T +   P  V AL+   +  +S G  H+  + + 
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTED 578

Query: 480 GKAVYAFGDGEYGKLGLGNTGLKPTP 505
           G  +Y +G G YG+LG GN   K  P
Sbjct: 579 G-VLYTWGKGSYGRLGHGNAEDKLIP 603



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 42/75 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            P  + I  +D +    H+LA++  G+V++WG  S+  LG+GN  +   P  V ALS   
Sbjct: 502 FPGDEEIIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDR 561

Query: 69  IRQVSAGRSHSAAWT 83
           I  +SAG  HSAA T
Sbjct: 562 IVHISAGSMHSAAVT 576



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 41/68 (60%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG  H  V T +G ++++G+ D G++G+ TT    VP+R+   + + ++ V+CG  H+
Sbjct: 4139 IGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPKRINITDNICIDHVACGSAHS 4198

Query: 474  VCIADKGK 481
            +  + K +
Sbjct: 4199 IAWSSKQR 4206



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 11/95 (11%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE-------RVVALNKVHVE 464
            A I  G +    VT +G +Y  G   +GRLG G++ N   P        R +A+ K+ + 
Sbjct: 3870 AMITGGEQTLFAVTDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIH 3929

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            S   G  H + +  +G+ +YA+G+GE GKLGLG T
Sbjct: 3930 S---GGKHCLAVTTQGE-LYAWGEGEDGKLGLGTT 3960



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 38/67 (56%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V I  G +  +A++  G++++WG     QLG GNQ + R+P+L+  LS   +  VS G 
Sbjct: 669 VVKIICGNQISMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGA 728

Query: 77  SHSAAWT 83
            H  A T
Sbjct: 729 QHCVALT 735



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG + S  +T +G LY++G GD  +LGHG   + + P+ +  L++  V  VS G  H 
Sbjct: 672 IICGNQISMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHC 731

Query: 474 VCIADKGKAVYAFG 487
           V +      VYA+G
Sbjct: 732 VALTTDSD-VYAWG 744



 Score = 45.1 bits (105), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 405 NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-V 463
           N ++  +     G  H+  +   G ++++G+GDYG+LG   +   KVP+ +  +     V
Sbjct: 610 NGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPV 669

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             + CG   ++ +   GK +Y++G G+  +LG GN
Sbjct: 670 VKIICGNQISMALTKDGK-LYSWGCGDTYQLGHGN 703



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 40/64 (62%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   +TS+G +Y++G+ ++G+ G+ +T+  + P+ V +L    +  ++CG +H+
Sbjct: 3226 VAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVASLKGHRICKIACGSSHS 3285

Query: 474  VCIA 477
            +  A
Sbjct: 3286 IAFA 3289



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 35/67 (52%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I + K+ H++D   G+ H   +++ G ++ WG     +LG  +     +P+LV AL  + 
Sbjct: 3969 IESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQ 4028

Query: 69   IRQVSAG 75
            +  V+ G
Sbjct: 4029 VTCVACG 4035



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 36/74 (48%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S T+   + A     IV IS G+ H  AV+  G ++ WG  S  +LG GN  +   P +V
Sbjct: 547 SQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIV 606

Query: 62  LALSNKNIRQVSAG 75
             L+   I QV  G
Sbjct: 607 EGLNGVKIVQVDCG 620



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 4/73 (5%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS- 73
            +H +  + G++    VS+ G+VFA G  S  +LG+G   N R P  + +LS   +R+V+ 
Sbjct: 2958 LHPIQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAV 3017

Query: 74   --AGRSHSAAWTA 84
              AGR H  A TA
Sbjct: 3018 SCAGR-HVLAVTA 3029



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I       + D+SVG +H +A++    V+AWG NS  ++     I    P ++ A S K 
Sbjct: 713 IEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKNSSFEVNESGDI-ISSPLMIEAASGKG 771

Query: 69  IRQVSAGRSHS-AAWTAPPLP 88
              ++ G S +  +++  P P
Sbjct: 772 ALLIACGASETFVSFSKSPTP 792


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
            [Rhipicephalus pulchellus]
          Length = 1480

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/421 (32%), Positives = 210/421 (49%), Gaps = 42/421 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   ++ I+VG+ H +A ++TG+V+ WG+N + QLG G      +P+LV AL  
Sbjct: 870  KRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIHKPRLVAALQG 929

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG-LPQDIPDHYGHLQNKPLPLIRA 125
            K I +VS G +H+ AW+            PS++   G +P  +P  Y  L++ P+P +R 
Sbjct: 930  KKINRVSCGSAHTVAWSTC---------NPSTAGACGRMPPAVPLEYDLLRDIPIPTLRN 980

Query: 126  RLKLLNRFSDLIYQVVRLLPLG---NVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVR 182
            R  LL  FS+L    + +  L     + Q+ +            LR L           +
Sbjct: 981  RYALLYHFSELFCPSLSMFDLSGSSEIQQEGLN----------QLRGLLVLSGKEGAFRK 1030

Query: 183  SVGKTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLP 233
             V  TM+  +  GP V + R+  K  ++          K +F Q+  ++  +   +L LP
Sbjct: 1031 VVQATMVRDRQHGPVVELNRIQVKRSRSKNGLAGPHGTKSVFGQMVAKMSLLTQENLLLP 1090

Query: 234  SRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNP 293
             R WKVK +GE  DD GG + ++I EMC EL +G++PLL+ TPNG  + G NRD ++LNP
Sbjct: 1091 HRVWKVKFVGESVDDCGGGYSESIAEMCDELQNGSLPLLILTPNGRDEAGTNRDCFLLNP 1150

Query: 294  DLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQ 353
              +  +  L  F+FLGIL G+AIRT  PL L L+  VWK +V  P+T  DL + D  Y  
Sbjct: 1151 AATLPIH-LNMFRFLGILMGIAIRTGSPLSLNLAEPVWKQLVGLPLTPADLNEVDRDYVP 1209

Query: 354  SLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAA 413
             L  IRD+      + + P       F   S TG+   +    Q    T  NR +Y   A
Sbjct: 1210 GLMCIRDMEPEAFQKLDMP-------FATHSATGQEVRLSAKYQKA--TVENRAEYVRLA 1260

Query: 414  I 414
            +
Sbjct: 1261 L 1261



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 59/88 (67%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           +ACG  HSA +T++G LYT+G G YGRLGHG + +   P++V AL+   V  V+CG    
Sbjct: 725 VACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDA 784

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            T+C+ D    V+++GDG+YGKLG G +
Sbjct: 785 QTLCVTDD-DCVWSWGDGDYGKLGRGGS 811



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T++G +YT+G GDY RLGHGT  + + P+RV AL    V  ++ G  H 
Sbjct: 831 VECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHC 890

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V   D G+ VY +GD + G+LG G       P+
Sbjct: 891 VACTDTGE-VYTWGDNDEGQLGDGTVNAIHKPR 922



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 1/90 (1%)

Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
           G KH   +++ G +Y++G GD G+LGHG   + + P  + +L    V  V+CG  H+ CI
Sbjct: 676 GGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACI 735

Query: 477 ADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              G+ +Y +G G YG+LG G++  +  P+
Sbjct: 736 TASGE-LYTWGKGRYGRLGHGDSDDQLRPK 764



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 413 AIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            +ACG     +  VT +  ++++G+GDYG+LG G +   KVP RV  L  + V  V CG 
Sbjct: 776 CVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGS 835

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G +VY +G G+Y +LG G 
Sbjct: 836 QFSVALTASG-SVYTWGKGDYHRLGHGT 862



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I  V ++ G +H LA+S  G+V++WG   D +LG GN+ +   P+++ +L  K +  V+ 
Sbjct: 668 IKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVAC 727

Query: 75  GRSHSAAWTA 84
           G +HSA  TA
Sbjct: 728 GGAHSACITA 737



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 31/62 (50%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            IA G  H    T  G +YT+G+ D G+LG GT      P  V AL    +  VSCG  H
Sbjct: 882 CIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGSAH 941

Query: 473 TV 474
           TV
Sbjct: 942 TV 943



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 37/69 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I + +   +VD++ G  H   ++ +G+++ WG     +LG G+  +   P+ V ALS 
Sbjct: 712 RVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSG 771

Query: 67  KNIRQVSAG 75
             +R V+ G
Sbjct: 772 WRVRCVACG 780


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/421 (33%), Positives = 211/421 (50%), Gaps = 47/421 (11%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S+ G+VF WG+N + QLG       + P+LV AL  
Sbjct: 4159 KKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQG 4218

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I  V+ G +H+ AW+             +SS    LP   P  Y  LQ+ P  ++  R
Sbjct: 4219 KKITNVACGSAHTLAWST----------NNASSACARLPPVAPLEYDLLQDIPTWVLHRR 4268

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLP---LVRS 183
            L LL  F++LI   + + P+   D               SL  L +  +YT+      + 
Sbjct: 4269 LVLLYYFAELICPCITMFPITGSD---------------SLHELRSILIYTIKEATFRKV 4313

Query: 184  VGKTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPS 234
            V  TM+  K+ GP + + R+  K  ++         +K +F Q+  ++  +    L LP 
Sbjct: 4314 VQATMVRDKHHGPVIELNRIQVKRSRSRGGLAGVDGMKSVFGQMVTKLPLLTSETLALPH 4373

Query: 235  RAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPD 294
            R WKV+ +GE  DD GG + ++I EMC EL +G++PLL+ TPNG  D G NRD +ILNP 
Sbjct: 4374 RVWKVEFVGESVDDCGGGYSESIAEMCDELQNGSLPLLIPTPNGRDDAGPNRDCFILNPT 4433

Query: 295  LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQS 354
                L  L  F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  Y   
Sbjct: 4434 AKSCLH-LNMFRFLGVLMGIAIRTGSPLSLNLAEPVWKQLAGMELTPADLTEIDRDYVPG 4492

Query: 355  LRAIRDIHLSGVTEANFPEI-IPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAA 413
            L  IR++   G+ E  F  + +P   F   S  G   P+ T  + +  TF NRL+Y   A
Sbjct: 4493 LLCIREM---GMEEPLFQNLEMP---FSTPSSCGTDVPLSTKYKRI--TFENRLEYVRLA 4544

Query: 414  I 414
            +
Sbjct: 4545 L 4545



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG--LN 471
           + CG  +SA +++NG LYT+G G+YGRLGHGT  +   P  + AL+  H+  V+CG    
Sbjct: 572 VECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYA 631

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT+CI  +GK VY++GDG+YGKLG G +     P+
Sbjct: 632 HTLCITSQGK-VYSWGDGDYGKLGRGGSDGSKLPR 665



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 61/103 (59%), Gaps = 4/103 (3%)

Query: 407  LQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
            LQ YE   IACG  HSA +TS G LYT+G G YGRLGHG + +   P+ +  L    V  
Sbjct: 4006 LQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVID 4065

Query: 466  VSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V+CG     T+CI D    V+++GDG+YGKLG G +     P+
Sbjct: 4066 VACGSGDAQTLCITDDDN-VWSWGDGDYGKLGRGGSDGCKVPK 4107



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG  +    P+ + +L    +  V+CG    
Sbjct: 3038 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDA 3097

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+ + D+G  V+++GDG++GKLG G +
Sbjct: 3098 QTLALTDEG-WVFSWGDGDFGKLGRGGS 3124



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 64/106 (60%), Gaps = 3/106 (2%)

Query: 400  PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
            P+ F ++    + A+  G KH+  +T +G ++++G G+ G+LGHG  +N   P+ + AL 
Sbjct: 2972 PIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALR 3031

Query: 460  KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
               +  ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3032 SKKIRDIACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNITQLKP 3076



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 49/75 (65%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I + K+  ++ ++VG  H LAV++TGQV+AWG+N   Q G G  I  R+P LV  L + +
Sbjct: 3185 IESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVH 3244

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3245 INRVACGSSHSIAWT 3259



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GDY RLGHGT  + + P++V AL    + S++ G  H 
Sbjct: 4120 VECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHC 4179

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V  +D+G+ V+ +GD + G+LG   T     P+
Sbjct: 4180 VACSDEGE-VFTWGDNDEGQLGDDTTNAIQRPR 4211



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 3/84 (3%)

Query: 414 IACG--FKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG  + H+  +TS G +Y++G+GDYG+LG G +   K+P  +  L  V +  V CG  
Sbjct: 624 VACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQ 683

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
            +V +++ G  VY +G GE  KLG
Sbjct: 684 FSVALSEDGH-VYTWGKGEGWKLG 706



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 2/102 (1%)

Query: 405  NRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
             RL   E   I CG + S  +T  G ++T+G GDY RLGHG+  + + P  + +L    V
Sbjct: 3134 ERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKV 3193

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              V+ G  H + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3194 IHVAVGALHCLAVTDTGQ-VYAWGDNDHGQQGNGTTIVNRKP 3234



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            A+  G KH   ++++  +Y++G GD G+LGHG  +  + P+ + AL    +  ++CG  H
Sbjct: 3961 AVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAH 4020

Query: 473  TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +  I   G+ +Y +G G YG+LG G++  +  P+
Sbjct: 4021 SAAITSTGQ-LYTWGKGRYGRLGHGDSEDQLKPK 4053



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R IP      I  ++V  G +H +A++  G+VF+WG   D +LG GN++N  +P+++ AL
Sbjct: 2971 RPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEAL 3030

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
             +K IR ++ G SHSAA T+
Sbjct: 3031 RSKKIRDIACGSSHSAAITS 3050



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           KH   +T +  +Y++GNGD GRLGHG T   + P  + AL    +  V CG  ++  I+ 
Sbjct: 525 KHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISA 584

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G A+Y +G G YG+LG G      TP
Sbjct: 585 NG-ALYTWGRGNYGRLGHGTAEDCLTP 610



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHG 444
            GR+    +  Q  P      + Y    +ACG     +  +T +  ++++G+GDYG+LG G
Sbjct: 4039 GRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4098

Query: 445  TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
             +   KVP+++ +L  + V  V CG   +V +   G +VY +G G+Y +LG G
Sbjct: 4099 GSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSG-SVYTWGKGDYHRLGHG 4150



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G+++++G+GD+G+LG G +    +P  +  LN + V  + CG  
Sbjct: 3090 VACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQ 3149

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G+ V+ +G G+Y +LG G+
Sbjct: 3150 FSLALTKTGE-VWTWGKGDYFRLGHGS 3175



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  ++ +G++YT+G G+  +LGH T  N + PE V  L    V  VS G++H 
Sbjct: 678 VYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHV 737

Query: 474 VCIADKGKAVYAFGDGE 490
           + + D+G+ VY +G  E
Sbjct: 738 LALTDQGE-VYGWGKNE 753



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 46/75 (61%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   ++  +V +S+G  HVLA+++ G+V+ WG N + Q+   +++  ++P+L+ AL  + 
Sbjct: 719 VEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQK 778

Query: 69  IRQVSAGRSHSAAWT 83
           +  V  G + S AWT
Sbjct: 779 VVGVCCGPAQSFAWT 793



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 2/78 (2%)

Query: 9    IPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + +++ I  I+V  G +H LA+S    V++WG   D +LG GN++    P+L+ AL  
Sbjct: 3949 LESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQG 4008

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I  ++ G +HSAA T+
Sbjct: 4009 YEIIDIACGGAHSAAITS 4026



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT+  + P  V  L  VH+  V+CG +H+
Sbjct: 3196 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHS 3255

Query: 474  V 474
            +
Sbjct: 3256 I 3256



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 40/77 (51%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I   +N+ IV +  G +  +A+S  G V+ WG     +LG   + N R P++V  L +
Sbjct: 665 RLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRD 724

Query: 67  KNIRQVSAGRSHSAAWT 83
           + +  VS G SH  A T
Sbjct: 725 RKVVGVSLGVSHVLALT 741



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 408  QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
            Q +   IA G K   +V+  G LY  G G  GRLG G + N   P  +  L++  ++ V+
Sbjct: 2926 QLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVA 2985

Query: 468  C--GLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
               G  H + +   GK V+++G+GE GKLG GN
Sbjct: 2986 VHSGGKHAMALTLDGK-VFSWGEGEDGKLGHGN 3017



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 41/69 (59%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + I A ++  I DI+ G+ H  A++++G+++ WG     +LG G+ I   +P+L+ +L  
Sbjct: 3025 KMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVG 3084

Query: 67   KNIRQVSAG 75
              I QV+ G
Sbjct: 3085 HRIVQVACG 3093



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           + +     I+++ I+   E  H LA++   +V++WGN    +LG G+     EP L+ AL
Sbjct: 505 QEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQAL 564

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
             K+I  V  G ++SAA +A
Sbjct: 565 KGKDIIDVECGGTYSAAISA 584



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G +IP        + +V I  G +  LA++ TG+V+ WG     +LG G+  + R+P
Sbjct: 3123 GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKP 3182

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
             ++ +L +K +  V+ G  H  A T
Sbjct: 3183 TVIESLKDKKVIHVAVGALHCLAVT 3207



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           I A  + HI+ ++ G+   H L +++ G+V++WG+    +LG G     + P+L+  L N
Sbjct: 613 ISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQN 672

Query: 67  KNIRQVSAGRSHSAA 81
             I QV  G   S A
Sbjct: 673 VKIVQVYCGAQFSVA 687



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I A +   I+DI+ G  H  A+++TGQ++ WG     +LG G+  +  +P+L+  L    
Sbjct: 4003 IEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYK 4062

Query: 69   IRQVSAG 75
            +  V+ G
Sbjct: 4063 VIDVACG 4069



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G ++T+G+ D G+LG  TT   + P  V AL    + +V+CG  H
Sbjct: 4171 SIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAH 4230

Query: 473  TV 474
            T+
Sbjct: 4231 TL 4232



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A K   I+D+  G  +  A+S  G ++ WG  +  +LG G   +   P ++ ALS+++
Sbjct: 561 IQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEH 620

Query: 69  IRQVSAG 75
           I +V+ G
Sbjct: 621 IIKVACG 627


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/421 (33%), Positives = 211/421 (50%), Gaps = 47/421 (11%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S+ G+VF WG+N + QLG       + P+LV AL  
Sbjct: 3320 KKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQG 3379

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I  V+ G +H+ AW+             +SS    LP   P  Y  LQ+ P  ++  R
Sbjct: 3380 KKITNVACGSAHTLAWST----------NNASSACARLPPVAPLEYDLLQDIPTWVLHRR 3429

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLP---LVRS 183
            L LL  F++LI   + + P+   D               SL  L +  +YT+      + 
Sbjct: 3430 LVLLYYFAELICPCITMFPITGSD---------------SLHELRSILIYTIKEATFRKV 3474

Query: 184  VGKTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPS 234
            V  TM+  K+ GP + + R+  K  ++         +K +F Q+  ++  +    L LP 
Sbjct: 3475 VQATMVRDKHHGPVIELNRIQVKRSRSRGGLAGVDGMKSVFGQMVTKLPLLTSETLALPH 3534

Query: 235  RAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPD 294
            R WKV+ +GE  DD GG + ++I EMC EL +G++PLL+ TPNG  D G NRD +ILNP 
Sbjct: 3535 RVWKVEFVGESVDDCGGGYSESIAEMCDELQNGSLPLLIPTPNGRDDAGPNRDCFILNPT 3594

Query: 295  LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQS 354
                L  L  F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  Y   
Sbjct: 3595 AKSCLH-LNMFRFLGVLMGIAIRTGSPLSLNLAEPVWKQLAGMELTPADLTEIDRDYVPG 3653

Query: 355  LRAIRDIHLSGVTEANFPEI-IPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAA 413
            L  IR++   G+ E  F  + +P   F   S  G   P+ T  + +  TF NRL+Y   A
Sbjct: 3654 LLCIREM---GMEEPLFQNLEMP---FSTPSSCGTDVPLSTKYKRI--TFENRLEYVRLA 3705

Query: 414  I 414
            +
Sbjct: 3706 L 3706



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 61/103 (59%), Gaps = 4/103 (3%)

Query: 407  LQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
            LQ YE   IACG  HSA +TS G LYT+G G YGRLGHG + +   P+ +  L    V  
Sbjct: 3167 LQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVID 3226

Query: 466  VSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V+CG     T+CI D    V+++GDG+YGKLG G +     P+
Sbjct: 3227 VACGSGDAQTLCITDDDN-VWSWGDGDYGKLGRGGSDGCKVPK 3268



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG  +    P+ + +L    +  V+CG    
Sbjct: 2199 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDA 2258

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+ + D+G  V+++GDG++GKLG G +
Sbjct: 2259 QTLALTDEG-WVFSWGDGDFGKLGRGGS 2285



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 64/106 (60%), Gaps = 3/106 (2%)

Query: 400  PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
            P+ F ++    + A+  G KH+  +T +G ++++G G+ G+LGHG  +N   P+ + AL 
Sbjct: 2133 PIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALR 2192

Query: 460  KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
               +  ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 2193 SKKIRDIACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNITQLKP 2237



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 49/75 (65%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I + K+  ++ ++VG  H LAV++TGQV+AWG+N   Q G G  I  R+P LV  L + +
Sbjct: 2346 IESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVH 2405

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 2406 INRVACGSSHSIAWT 2420



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GDY RLGHGT  + + P++V AL    + S++ G  H 
Sbjct: 3281 VECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHC 3340

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V  +D+G+ V+ +GD + G+LG   T     P+
Sbjct: 3341 VACSDEGE-VFTWGDNDEGQLGDDTTNAIQRPR 3372



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 2/101 (1%)

Query: 406  RLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            RL   E   I CG + S  +T  G ++T+G GDY RLGHG+  + + P  + +L    V 
Sbjct: 2296 RLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVI 2355

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             V+ G  H + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 2356 HVAVGALHCLAVTDTGQ-VYAWGDNDHGQQGNGTTIVNRKP 2395



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 3/93 (3%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            A+  G KH   ++++  +Y++G GD G+LGHG  +  + P+ + AL    +  ++CG  H
Sbjct: 3122 AVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAH 3181

Query: 473  TVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
            +  I   G+ +Y +G G YG+LG G++   LKP
Sbjct: 3182 SAAITSTGQ-LYTWGKGRYGRLGHGDSEDQLKP 3213



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R IP      I  ++V  G +H +A++  G+VF+WG   D +LG GN++N  +P+++ AL
Sbjct: 2132 RPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEAL 2191

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
             +K IR ++ G SHSAA T+
Sbjct: 2192 RSKKIRDIACGSSHSAAITS 2211



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHG 444
            GR+    +  Q  P      + Y    +ACG     +  +T +  ++++G+GDYG+LG G
Sbjct: 3200 GRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 3259

Query: 445  TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
             +   KVP+++ +L  + V  V CG   +V +   G +VY +G G+Y +LG G
Sbjct: 3260 GSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSG-SVYTWGKGDYHRLGHG 3311



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G+++++G+GD+G+LG G +    +P  +  LN + V  + CG  
Sbjct: 2251 VACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQ 2310

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G+ V+ +G G+Y +LG G+
Sbjct: 2311 FSLALTKTGE-VWTWGKGDYFRLGHGS 2336



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 2/78 (2%)

Query: 9    IPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + +++ I  I+V  G +H LA+S    V++WG   D +LG GN++    P+L+ AL  
Sbjct: 3110 LESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQG 3169

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I  ++ G +HSAA T+
Sbjct: 3170 YEIIDIACGGAHSAAITS 3187



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT+  + P  V  L  VH+  V+CG +H+
Sbjct: 2357 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHS 2416

Query: 474  V 474
            +
Sbjct: 2417 I 2417



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 408  QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
            Q +   IA G K   +V+  G LY  G G  GRLG G + N   P  +  L++  ++ V+
Sbjct: 2087 QLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVA 2146

Query: 468  C--GLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
               G  H + +   GK V+++G+GE GKLG GN
Sbjct: 2147 VHSGGKHAMALTLDGK-VFSWGEGEDGKLGHGN 2178



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 41/69 (59%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + I A ++  I DI+ G+ H  A++++G+++ WG     +LG G+ I   +P+L+ +L  
Sbjct: 2186 KMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVG 2245

Query: 67   KNIRQVSAG 75
              I QV+ G
Sbjct: 2246 HRIVQVACG 2254



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G +IP        + +V I  G +  LA++ TG+V+ WG     +LG G+  + R+P
Sbjct: 2284 GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKP 2343

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
             ++ +L +K +  V+ G  H  A T
Sbjct: 2344 TVIESLKDKKVIHVAVGALHCLAVT 2368



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I A +   I+DI+ G  H  A+++TGQ++ WG     +LG G+  +  +P+L+  L    
Sbjct: 3164 IEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYK 3223

Query: 69   IRQVSAG 75
            +  V+ G
Sbjct: 3224 VIDVACG 3230



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G ++T+G+ D G+LG  TT   + P  V AL    + +V+CG  H
Sbjct: 3332 SIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAH 3391

Query: 473  TV 474
            T+
Sbjct: 3392 TL 3393


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/369 (34%), Positives = 197/369 (53%), Gaps = 22/369 (5%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +   +   ++ IS G  H +  ++ G+V+ WG+N + QLG G     ++P+LV AL N
Sbjct: 3905 KKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQN 3964

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +VS G +H+ AW+         G +   +    LP  IP  Y  L++ P+P +R R
Sbjct: 3965 KKINRVSCGSAHTVAWST------CKGCSTPVAGSSRLPTSIPLQYDLLKDIPIPALRNR 4018

Query: 127  LKLLNRFSDLIYQVVRLLPLGNV---DQDWVQCTPYSWLV---HPSLRPLFAPRVYTLPL 180
            L LL+ F++++  ++ +LPLG V   D D         ++   H  LR +          
Sbjct: 4019 LLLLHHFAEIVCPILPMLPLGTVNCRDMDGNVLEETEGVLCGNHDRLRGILMASAKEAAF 4078

Query: 181  VRSVGKTMLVGKNFGPSVTVRRLTTKSKQTV---------KPIFAQISRQVVKMKGSDLR 231
             + V  TM+  +  GP V + R+  +  +             +FAQ++ ++  +    L 
Sbjct: 4079 RKVVQATMIRDRQHGPVVELNRIALRRSRATGTSGNAGPNSTVFAQMANKLSLLTYDVLM 4138

Query: 232  LPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYIL 291
            LP R WKVK +GE  DD GG + ++I EMC EL +G++PLL+ TPNG  + G NRD +IL
Sbjct: 4139 LPHRTWKVKFVGESVDDCGGGYSESIAEMCEELQNGSLPLLILTPNGREEAGTNRDCFIL 4198

Query: 292  NPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLY 351
            NP  S + Q+L  F+FLG+L G+AIRT  PL L L+   WK +V  P++  DL + D  Y
Sbjct: 4199 NPSASTA-QNLKMFQFLGVLMGIAIRTGSPLSLNLAEPTWKALVGLPLSLIDLNEIDRHY 4257

Query: 352  AQSLRAIRD 360
              +L  IRD
Sbjct: 4258 WPALCHIRD 4266



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 1/87 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  HSA VTS+G LYT+G G+YGRLGHG  +    P+RV +L    V  VSCG    
Sbjct: 2842 VAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDA 2901

Query: 474  VCIA-DKGKAVYAFGDGEYGKLGLGNT 499
              +A  +G  VY++GDG++GKLG G +
Sbjct: 2902 QTLALVEGGLVYSWGDGDFGKLGRGGS 2928



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 3/89 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +ACG  HSA +T+ G LYT+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 3758 VACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACGSGDA 3817

Query: 472  HTVCIAD-KGKAVYAFGDGEYGKLGLGNT 499
             T  I D +G  V+++GDG+YGKLG G +
Sbjct: 3818 QTCAITDEEGGTVWSWGDGDYGKLGRGGS 3846



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +++NG +YT+G GDY RLGHG   + + P++V+ L    V S+S G  H 
Sbjct: 3866 VECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHC 3925

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            V   D+G+ VY +GD + G+LG G T
Sbjct: 3926 VVCTDQGE-VYTWGDNDEGQLGDGTT 3950



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 58/96 (60%), Gaps = 1/96 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G +H+  +T++G ++++G GD G+LGHG   +   P  + ALN   V  V+ G 
Sbjct: 2787 KVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGS 2846

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            NH+  +   G+ +Y +G GEYG+LG G+   + TP+
Sbjct: 2847 NHSAAVTSSGE-LYTWGLGEYGRLGHGDNLTQLTPK 2881



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 47/84 (55%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   ++ +SVG  H LAV++ GQVFAWG+N   Q G G+    R P LV  +    
Sbjct: 2989 VEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIK 3048

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTP 92
            I +V+ G SHS AWTAP  P   P
Sbjct: 3049 ITRVACGSSHSVAWTAPEPPSVAP 3072



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T NG++YT+G GDY RLGHG+  + + P  V  L    V  VS G  H 
Sbjct: 2948 VECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHC 3007

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ V+A+GD ++G+ G G+  +   P
Sbjct: 3008 LAVTDAGQ-VFAWGDNDHGQQGNGSITVNRRP 3038



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G G+ G+LGHG  +    P  + +L    V  V+CG 
Sbjct: 3703 KVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGG 3762

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKP 503
             H+  I   G+ +Y +G G YG+LG G++   LKP
Sbjct: 3763 AHSAAITALGE-LYTWGKGRYGRLGHGDSDDQLKP 3796



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 8/151 (5%)

Query: 353  QSLRA--IRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYY 410
            +SLR   + D+   G   A    +  L  + G    GR+    +  Q  P      L Y 
Sbjct: 3748 ESLRGKDVVDVACGGAHSAAITALGELYTW-GKGRYGRLGHGDSDDQLKPKLVEALLGYR 3806

Query: 411  EAAIACGF--KHSAVVTSN--GYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
               +ACG     +  +T    G ++++G+GDYG+LG G +   K+P ++ +L+ + +  V
Sbjct: 3807 VMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKV 3866

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
             CG   +V +++ G +VY +G G+Y +LG G
Sbjct: 3867 ECGSQFSVALSNNG-SVYTWGKGDYHRLGHG 3896



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 45/67 (67%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V ++ G +H LA+S+ G+V++WG   D +LG GN++    P+++ +L  K++  V+ G +
Sbjct: 3704 VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGA 3763

Query: 78   HSAAWTA 84
            HSAA TA
Sbjct: 3764 HSAAITA 3770



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +I+ G  H  V T  G +YT+G+ D G+LG GTT   + P  V AL    +  VSCG  H
Sbjct: 3917 SISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAH 3976

Query: 473  TV 474
            TV
Sbjct: 3977 TV 3978



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 42/70 (60%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +  V +  G  H LA++  G+VF+WG   D +LG G+  +   P+ + AL+   +R V+A
Sbjct: 2785 VRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAA 2844

Query: 75   GRSHSAAWTA 84
            G +HSAA T+
Sbjct: 2845 GSNHSAAVTS 2854



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK--VHVESVSCGL 470
            ++A G K   +VT +G  Y  G G  GRLG G + N   P ++ AL++  V   +V  G 
Sbjct: 2735 SVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGG 2794

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H + +   G+ V+++G+G+ GKLG G+     TP+
Sbjct: 2795 RHALALTADGR-VFSWGEGDDGKLGHGDVTSLDTPR 2829



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            ++CG +   +  +   G +Y++G+GD+G+LG G +     P  V  L+ + V  V CG  
Sbjct: 2894 VSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQ 2953

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G  VY +G G+Y +LG G+
Sbjct: 2954 FSVALTCNGH-VYTWGKGDYFRLGHGS 2979



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 38/69 (55%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A     + D++ G+ H  AV+++G+++ WG     +LG G+ +    P+ V +L  
Sbjct: 2829 RCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESLVG 2888

Query: 67   KNIRQVSAG 75
            + + QVS G
Sbjct: 2889 QRVVQVSCG 2897



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 37/69 (53%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + +   +VD++ G  H  A++  G+++ WG     +LG G+  +  +P+LV AL  
Sbjct: 3745 RIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLG 3804

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 3805 YRVMDVACG 3813



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS--AG 75
            + ++ G++ +  V+ +G+ +A G  S+ +LGLG+  N   P  + ALS   +R+V+  +G
Sbjct: 2734 ISVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSG 2793

Query: 76   RSHSAAWTA 84
              H+ A TA
Sbjct: 2794 GRHALALTA 2802



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++ G  H   VT  G ++ +G+ D+G+ G+G+    + P  V  ++ + +  V+CG +H+
Sbjct: 3000 VSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVACGSSHS 3059

Query: 474  V 474
            V
Sbjct: 3060 V 3060



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 34/75 (45%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +     + +  +  G +  +A++  G V+ WG     +LG G+  + R P LV  L  K 
Sbjct: 2937 VDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKK 2996

Query: 69   IRQVSAGRSHSAAWT 83
            +  VS G  H  A T
Sbjct: 2997 VIGVSVGALHCLAVT 3011


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 190/365 (52%), Gaps = 37/365 (10%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   IV I+ G+ H +A S+ G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4183 RKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHALQG 4242

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            KNI +V+ G +H+ AW+             ++     LP   P  Y  +++ P   +  R
Sbjct: 4243 KNITRVACGSAHTLAWS-------------TTKATHSLPAATPMEYDLVKDLPFSALHNR 4289

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+ F++L+   + + P  GNV  +              L P+    +      + V 
Sbjct: 4290 LVLLHHFAELLCPTLAMFPTTGNVALN-------------KLAPMLVYTIKEATFRKVVQ 4336

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP + + R+  K  ++         +K +F Q+  ++  +    L LP R 
Sbjct: 4337 ATMVRDRQHGPIIELNRIQVKRARSKGGFAGPDGMKSVFGQMVSKMSLLTQDVLFLPHRV 4396

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G++PLL+ TPNG  D+G NRD ++LNP L+
Sbjct: 4397 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSLPLLIPTPNGRDDSGTNRDCFLLNP-LA 4455

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
             S   +  F+FLGIL G+AIRT  PL L L+  VWK +   P+T  DL + D  Y   L 
Sbjct: 4456 TSQLHMNMFQFLGILMGIAIRTGSPLSLNLAEPVWKQLAGMPLTPADLTEVDRAYVPGLL 4515

Query: 357  AIRDI 361
             IRD+
Sbjct: 4516 CIRDM 4520



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA ++S G+LYT+G G YGRLGHG + +   P  V AL    V  V+CG    
Sbjct: 4038 IACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDA 4097

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4098 QTLCVTDDDN-VWSWGDGDYGKLGRGGS 4124



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--N 471
           IACG  +SA ++S G L T+G G YGRLGHG   +  +P  V ALN   V  V+CG   +
Sbjct: 558 IACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDS 617

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+C+ + G  V+++GDG+YGKLG G +     P+
Sbjct: 618 QTLCVTNSG-IVFSWGDGDYGKLGRGGSDGSKLPK 651



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA + SNG LYT+G G+YGRLGHG T     P+ V AL    V  V+CG    
Sbjct: 3066 IACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDA 3125

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+ + + G +VY++GDG++GKLG G +
Sbjct: 3126 QTMALTEDG-SVYSWGDGDFGKLGRGGS 3152



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 88/161 (54%), Gaps = 10/161 (6%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVPLTFA 404
            ++++ L  ++ IH++G ++  F  ++  E     C EG +    +      G+  P+ F 
Sbjct: 2947 VHSEVLSKLKPIHIAGGSKTLF--VVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFL 3004

Query: 405  NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            ++    + A+  G KH+  +T +G ++++G G+ G+LGHG  ++   P  + AL    + 
Sbjct: 3005 SQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIR 3064

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKP 503
             ++CG  H+  IA  G+ +Y +G GEYG+LG G+T   LKP
Sbjct: 3065 DIACGSGHSAAIASNGE-LYTWGLGEYGRLGHGDTTTHLKP 3104



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHGT  + + P 
Sbjct: 4124 SDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPR 4183

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V AL    + S++ G  H V  +DKG+ VY +GD + G+LG G T  + +P+
Sbjct: 4184 KVSALQGKKIVSIATGSLHCVACSDKGE-VYTWGDNDEGQLGDGTTHAQQSPR 4235



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 10/162 (6%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPL--TFANRL 407
            L  +SL A+R I L+G  +  F      + +  A+  G +  + TGG    +  T    +
Sbjct: 3919 LPCESLSALRPIQLAGGEQTLFAVTADGKVY--ATGYGALGRLGTGGVDSVMVPTLLESI 3976

Query: 408  QYY---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            Q+    + A+  G KH   ++S G++Y++G GD G+LGHG  + +  P+ + AL    + 
Sbjct: 3977 QHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIV 4036

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKPT 504
             ++CG +H+  I+  G  +Y +G G YG+LG G++   LKPT
Sbjct: 4037 DIACGGHHSAAISSAG-WLYTWGKGRYGRLGHGDSDDQLKPT 4077



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 3/98 (3%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   +V ++VG  H LAV++ GQV+AWG+N   Q G G+ +  R+P LV  L +  
Sbjct: 3213 VEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHNLEDAK 3272

Query: 69   IRQVSAGRSHSAAWT---APPLPPHTPGHTPSSSLRLG 103
            + +V+ G SHS AW     P L    P   P++   LG
Sbjct: 3273 VNRVACGSSHSIAWVLTDQPTLGNQEPVTFPTAKDPLG 3310



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T  G ++T+G GDY RLGHG   + + P  V  L    V  V+ G  H 
Sbjct: 3172 VECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHC 3231

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G+T +   P
Sbjct: 3232 LAVTDAGQ-VYAWGDNDHGQQGNGSTMVNRKP 3262



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 44/67 (65%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V +  G +H LA++  G+VF+WG   D +LG GN+++  +P+L+ AL +K IR ++ 
Sbjct: 3009 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIAC 3068

Query: 75   GRSHSAA 81
            G  HSAA
Sbjct: 3069 GSGHSAA 3075



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 4/99 (4%)

Query: 402  TFANRLQYYEAA-IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
            T    LQ Y+   +ACG     +  VT +  ++++G+GDYG+LG G +   KVP ++ +L
Sbjct: 4077 TVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL 4136

Query: 459  NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              + V  V CG   +V +   G AVY +G G+Y +LG G
Sbjct: 4137 AGLGVVKVECGSQFSVALTRSG-AVYTWGKGDYHRLGHG 4174



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           KH   +T+ G +Y++GNGD GRLGHG + +   P+ +  L+   V  ++CG  ++  I+ 
Sbjct: 511 KHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISS 570

Query: 479 KGKAVYAFGDGEYGKLGLG 497
            G+ +  +G G YG+LG G
Sbjct: 571 TGE-LLTWGRGSYGRLGHG 588



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 41/67 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G V++WG   D +LG GN+I Y  P+L+ AL    I  ++ 
Sbjct: 3981 IKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIAC 4040

Query: 75   GRSHSAA 81
            G  HSAA
Sbjct: 4041 GGHHSAA 4047



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G +Y++G+GD+G+LG G +     P  V  LN + V  V CG  
Sbjct: 3118 VACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQ 3177

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G+ V+ +G G+Y +LG GN
Sbjct: 3178 FSLALTKYGE-VWTWGKGDYFRLGHGN 3203



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSA--VVTSNGYLYTFGNGDYGRLGHG 444
           GR+   +    S+P        +    +ACG   S    VT++G ++++G+GDYG+LG G
Sbjct: 583 GRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRG 642

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K+P+ V  L   +V  V CG   +  +   G+ VY +G G++ +LG GN
Sbjct: 643 GSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGE-VYTWGKGDHYRLGHGN 695



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 3/113 (2%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           + G  +P      L      + CG + SA +T++G +YT+G GD+ RLGHG   + + P+
Sbjct: 644 SDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPK 703

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL--GLGNTGLKPT 504
            V  L    V  +S G  H + I +  + VY +G  +  ++   LG    +PT
Sbjct: 704 LVEGLRNKKVRDLSVGNLHILAITED-QLVYGWGRNDACQIDPSLGAVVSEPT 755



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 41/69 (59%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A K+  I DI+ G+ H  A+++ G+++ WG     +LG G+   + +P+LV AL  
Sbjct: 3053 RLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVG 3112

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3113 QRVIQVACG 3121



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 37/57 (64%)

Query: 25  EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAA 81
           +H LA++  G V++WGN    +LG G+  +  EPQ++  LS++ +  ++ G ++SAA
Sbjct: 511 KHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAA 567



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 3   GTSGRHIPA----FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
           G+ G  +P       + ++V +  G +   A++  G+V+ WG     +LG GN+ + R P
Sbjct: 643 GSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFP 702

Query: 59  QLVLALSNKNIRQVSAGRSHSAAWTAPPL 87
           +LV  L NK +R +S G  H  A T   L
Sbjct: 703 KLVEGLRNKKVRDLSVGNLHILAITEDQL 731



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G +YT+G+ D G+LG GTT   + P  V AL   ++  V+CG  H
Sbjct: 4195 SIATGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAH 4254

Query: 473  TV 474
            T+
Sbjct: 4255 TL 4256



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+G+TM  + P  V  L    V  V+CG +H+
Sbjct: 3224 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHS 3283

Query: 474  V 474
            +
Sbjct: 3284 I 3284



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 36/75 (48%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +     + +V +  G +  LA++  G+V+ WG     +LG GN  + R P LV  L  K 
Sbjct: 3161 VDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKK 3220

Query: 69   IRQVSAGRSHSAAWT 83
            +  V+ G  H  A T
Sbjct: 3221 VVHVAVGALHCLAVT 3235



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 36/75 (48%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +N  + D+SVG  H+LA++    V+ WG N   Q+         EP L   LS K+
Sbjct: 705 VEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSLGAVVSEPTLCPTLSGKS 764

Query: 69  IRQVSAGRSHSAAWT 83
           +  +  G   S AW+
Sbjct: 765 VIGLVCGPMQSFAWS 779



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 23  GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAW 82
           G    L V+N+G VF+WG+    +LG G     + P++V  L ++N+ +V  G   SAA 
Sbjct: 615 GDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAAL 674

Query: 83  TA 84
           TA
Sbjct: 675 TA 676



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I A     IVDI+ G  H  A+S+ G ++ WG     +LG G+  +  +P +V AL    
Sbjct: 4027 IEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYK 4086

Query: 69   IRQVSAG 75
            +  V+ G
Sbjct: 4087 VIDVACG 4093



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 8    HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
            H      +  + I+ G++ +  VS  G+++A G  ++ +LGLG+  N  EP+ +  LS  
Sbjct: 2948 HSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQY 3007

Query: 68   NIRQVS--AGRSHSAAWT 83
             I++V+  +G  H+ A T
Sbjct: 3008 IIKKVAVHSGGKHALALT 3025


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 186/364 (51%), Gaps = 34/364 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I+ I+ G+ H +A S+ G+VF WG+N + QLG G     + P+LV AL  
Sbjct: 4185 RKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHALQG 4244

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+       T   T S      +P   P  Y  +++ P P++  R
Sbjct: 4245 KKITRVACGSAHTLAWS-------TMKATQSR-----MPATTPMEYDLVKDLPFPVLHNR 4292

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ F++L+   + + P+           P S      L P+    +      + V  
Sbjct: 4293 LVLLHHFAELLCPCLPMFPITG---------PISL---SKLAPILVYSIKEATFRKVVQA 4340

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP + + R+  K  +          +K +F Q+  ++  +    L  P R W
Sbjct: 4341 TMVRDRQHGPVIELNRIQVKRARGKGGFAGPDGIKSVFGQMVSKMSLLTQDVLFFPHRVW 4400

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK +GE  DD GG + ++I EMC EL +G++PLL+ TPNG  D G NRD ++LNP    
Sbjct: 4401 KVKFIGESVDDCGGGYSESIAEMCDELQNGSLPLLIPTPNGRDDNGTNRDCFLLNPAADS 4460

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
             L  L  F+FLGIL G+AIRT  PL L L+  VWK +   P+T  DL + D  Y   L  
Sbjct: 4461 PLH-LNMFRFLGILMGIAIRTGSPLSLNLAEPVWKQLAGVPLTPADLTEVDRDYVPGLLC 4519

Query: 358  IRDI 361
            IRD+
Sbjct: 4520 IRDM 4523



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--N 471
           IACG  +SA ++SNG LYT+G G+YGRLGHG + +  VP  V ALN   +  V+CG   +
Sbjct: 563 IACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDS 622

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+C+   G  V+++GDG+YGKLG G      TP+
Sbjct: 623 QTLCVTASG-IVFSWGDGDYGKLGRGGCNGSKTPK 656



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +ACG  HSA +TS G+LYT+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 4040 VACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDA 4099

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4100 QTLCVTDDDN-VWSWGDGDYGKLGRGGS 4126



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 86/161 (53%), Gaps = 10/161 (6%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVPLTFA 404
            +Y++SL  ++ +H++G ++  F  ++  E     C EG +    +       +  P+ F 
Sbjct: 2934 VYSESLSKLKPVHIAGGSKTLF--VVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFL 2991

Query: 405  NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            ++    + A+  G KH+  +T +G ++++G G+ G+LGHG   +   P  + +L    + 
Sbjct: 2992 SQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIR 3051

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG--NTGLKP 503
             V+CG  H+  I   G+ +Y +G GEYG+LG G  NT LKP
Sbjct: 3052 DVACGSGHSAAITSSGE-LYTWGLGEYGRLGHGDTNTQLKP 3091



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 3/94 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +ACG  HSA +TS+G LYT+G G+YGRLGHG T     P+ V +L    V  V+CG    
Sbjct: 3053 VACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDA 3112

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             T+ +   G +VY++GDG++GKLG G +    TP
Sbjct: 3113 QTMALTADG-SVYSWGDGDFGKLGRGGSDGCYTP 3145



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 8/162 (4%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL-TFANRL 407
            +  +SL A+R + L+G  +  F      + +  G    GR+   + G  SV + T    +
Sbjct: 3921 VLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLG--IGGTDSVMMPTLLESI 3978

Query: 408  QYY---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            Q+    + A+  G KH   ++S G++Y++G GD G+LGHG  +++  P+ +  L    + 
Sbjct: 3979 QHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIV 4038

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             V+CG +H+  I   G  +Y +G G YG+LG G++  + TP+
Sbjct: 4039 DVACGGHHSAAITSAG-WLYTWGKGRYGRLGHGDSEDQLTPK 4079



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 1/106 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHGT  + + P 
Sbjct: 4126 SDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPR 4185

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            +V AL    + S++ G  H V  +DKG+ V+ +GD + G+LG G T
Sbjct: 4186 KVAALQGKKIISIATGSLHCVACSDKGE-VFTWGDNDEGQLGDGTT 4230



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   ++ ++VG  H LAV++TGQV+AWG+N   Q G G+ I  ++P LV  L +  
Sbjct: 3200 VEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDAR 3259

Query: 69   IRQVSAGRSHSAAWTAPPLP 88
            + +VS G SHS AW     P
Sbjct: 3260 VNRVSCGSSHSIAWVLTDQP 3279



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P  V  L    V  V+ G  H 
Sbjct: 3159 IECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHC 3218

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G+T +   P
Sbjct: 3219 LAVTDTGQ-VYAWGDNDHGQQGNGSTIVNKKP 3249



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 1/81 (1%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           KH   +T +  +Y++GNGD GRLGHG    ++ P+ + +L   ++  ++CG  ++  ++ 
Sbjct: 516 KHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSS 575

Query: 479 KGKAVYAFGDGEYGKLGLGNT 499
            G+ +Y +G G YG+LG GN+
Sbjct: 576 NGE-LYTWGRGNYGRLGHGNS 595



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 44/70 (62%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V +  G +H LA++  G+VF+WG   D +LG GN  +  +P+L+ +L +K IR V+ 
Sbjct: 2996 IKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVAC 3055

Query: 75   GRSHSAAWTA 84
            G  HSAA T+
Sbjct: 3056 GSGHSAAITS 3065



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 4/94 (4%)

Query: 407  LQYYEAA-IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            LQ Y+   +ACG     +  VT +  ++++G+GDYG+LG G +   KVP ++ +L  + V
Sbjct: 4084 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGV 4143

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              V CG   +V +   G ++Y +G G+Y +LG G
Sbjct: 4144 IKVECGSQFSVALTRSG-SIYTWGKGDYHRLGHG 4176



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSA--VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG   S    VT++G ++++G+GDYG+LG G     K P+ V  L  ++V  V CG  
Sbjct: 615 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQ 674

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +  +   G+ VY +G GE  +LG GN
Sbjct: 675 FSAALTAYGE-VYTWGKGEAYRLGHGN 700



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +  V ++ G +H LA+S+ G V++WG   D +LG GN+++Y  P+L+  L    I  V+ 
Sbjct: 3983 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVAC 4042

Query: 75   GRSHSAAWTA 84
            G  HSAA T+
Sbjct: 4043 GGHHSAAITS 4052



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T++G +Y++G+GD+G+LG G +     P  V  LN + V  + CG  
Sbjct: 3105 VACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQ 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G+ V+ +G G+Y +LG GN
Sbjct: 3165 FSLALTKYGE-VWTWGKGDYFRLGHGN 3190



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           G   P      L    A + CG + SA +T+ G +YT+G G+  RLGHG   + + P+ +
Sbjct: 651 GSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAI 710

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL--GLGNTGLKPT 504
            AL    V+ +  G  H + + +  + VY +G  +YG++   LG    +PT
Sbjct: 711 EALKTKKVKELCVGSLHVLALTED-QLVYGWGRNDYGQIDPALGTIVSEPT 760



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 40/60 (66%)

Query: 25  EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
           +H LA++    V++WGN    +LG G++  Y EP+L+ +L +KNI  ++ G ++SAA ++
Sbjct: 516 KHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSS 575



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC--GLN 471
            IA G K   VV+  G LY  G G  GRLG G   N   P+ +  L++  ++ V+   G  
Sbjct: 2947 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGK 3006

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H + +   G+ V+++G+GE GKLG GN      P+
Sbjct: 3007 HALALTQDGR-VFSWGEGEDGKLGHGNCSSLDKPR 3040



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+G+T+  K P  V  L+   V  VSCG +H+
Sbjct: 3211 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHS 3270

Query: 474  V 474
            +
Sbjct: 3271 I 3271



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G ++T+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4197 SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHALQGKKITRVACGSAH 4256

Query: 473  TV 474
            T+
Sbjct: 4257 TL 4258



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G + P        + +V I  G +  LA++  G+V+ WG     +LG GN  + R+P
Sbjct: 3138 GSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP 3197

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
             LV  L  K +  V+ G  H  A T
Sbjct: 3198 TLVEGLRGKKVIHVAVGALHCLAVT 3222



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 41/69 (59%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + K+  I D++ G+ H  A++++G+++ WG     +LG G+     +P+LV +L  
Sbjct: 3040 RLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVG 3099

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3100 QRVIQVACG 3108



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 39/74 (52%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           +I++  +  G +   A++  G+V+ WG     +LG GN+ + R P+ + AL  K ++++ 
Sbjct: 663 DINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELC 722

Query: 74  AGRSHSAAWTAPPL 87
            G  H  A T   L
Sbjct: 723 VGSLHVLALTEDQL 736



 Score = 45.4 bits (106), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL--GLGNQINYREPQLVLAL 64
           + I A K   + ++ VG+ HVLA++    V+ WG N   Q+   LG  ++  EP L   L
Sbjct: 708 KAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQIDPALGTIVS--EPTLCPTL 765

Query: 65  SNKNIRQVSAGRSHSAAW 82
           S KN+  +  G + S AW
Sbjct: 766 SGKNVIGLVCGPTQSFAW 783



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 34/67 (50%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I       IVD++ G  H  A+++ G ++ WG     +LG G+  +   P+LV AL +  
Sbjct: 4029 IEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYK 4088

Query: 69   IRQVSAG 75
            +  V+ G
Sbjct: 4089 VIDVACG 4095



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A     IV ++ G+     L V+ +G VF+WG+    +LG G     + P++V  L +
Sbjct: 604 VSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLD 663

Query: 67  KNIRQVSAGRSHSAAWTA 84
            N+ +V  G   SAA TA
Sbjct: 664 INVAKVYCGGQFSAALTA 681



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 38/71 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +  + +I  I+ G+ +  A+S+ G+++ WG  +  +LG GN  +   P LV AL+   
Sbjct: 552 IESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHM 611

Query: 69  IRQVSAGRSHS 79
           I  V+ G   S
Sbjct: 612 IVYVACGSGDS 622



 Score = 38.5 bits (88), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS--AG 75
            V I+ G++ +  VS  G+++A G  ++ +LGLG+  N  EP+ +  LS   I++V+  +G
Sbjct: 2945 VHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSG 3004

Query: 76   RSHSAAWT 83
              H+ A T
Sbjct: 3005 GKHALALT 3012


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 144/406 (35%), Positives = 214/406 (52%), Gaps = 40/406 (9%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            IV  S G+ HVLA+++ G+V+AWG+N + QLG G       P+ + AL  K I+QVS G 
Sbjct: 3845 IVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGS 3904

Query: 77   SHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSDL 136
            +HS AW A     HT   TP++         IP  Y  LQ   +  +R RL  L+ FS +
Sbjct: 3905 AHSFAW-ASEEACHTDNSTPTT---------IPLEYDILQEFSVHELRNRLIFLHHFSTI 3954

Query: 137  IYQVVRL-LPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNF 194
            I Q V L +P+ G +  D ++    S++V+P    +F  +V  L +VR         +  
Sbjct: 3955 INQTVLLFMPIRGEISLDAIR----SYMVYPVKESIF-KKVLQLSMVRE--------QRH 4001

Query: 195  GPSVTVRRLTTKS--KQTVKP----IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADD 248
            GP   + R+ T+   K T       +F Q+   +  +    L L  R WKV+ +GE  DD
Sbjct: 4002 GPMFELNRIRTRKTRKSTCNDYSHTVFGQMVNNMDFLDEDSLFLYHRVWKVQFVGESVDD 4061

Query: 249  AGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFL 308
             GG + ++I EMC EL +G++P+L++TPNG  DTG +RD +ILNP  +  + + M F+FL
Sbjct: 4062 YGGGYSESIAEMCEELQNGSLPILIQTPNGREDTGTSRDCFILNPSATTKVHNKM-FEFL 4120

Query: 309  GILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTE 368
            G+L G+AIRT  PL L L+  +WKL+    +  TDL + D  Y   L  +RD  L G  E
Sbjct: 4121 GVLIGIAIRTCSPLSLNLAEPMWKLLCGMKLMPTDLIEIDKDYVPGLLYVRD--LEGEDE 4178

Query: 369  ANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             +  +I     F   S TG    +V   Q   +T  N+ +Y +A +
Sbjct: 4179 FSNLDI----SFCTTSSTGH--TVVLSSQHKHVTQYNKHEYIQACL 4218



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 5/105 (4%)

Query: 403  FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
             A R+ Y    IACG  HSA +TS+G LYT+G G YGRLGH   ++   P+ V      +
Sbjct: 2730 LAKRVFY----IACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKN 2785

Query: 463  VESVSCGLNHTVCIA-DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +  V+CG      +A D    VY++GDG++GKLG G +    TPQ
Sbjct: 2786 ITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQ 2830



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 3/84 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA ++  G+LYT+G G YGRLGHG   ++  P+ V  L   HV  V+CG    
Sbjct: 3690 IACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDA 3749

Query: 472  HTVCIADKGKAVYAFGDGEYGKLG 495
             T+C+      V+++GDG+YGKLG
Sbjct: 3750 QTMCVTSDDN-VWSWGDGDYGKLG 3772



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 49/73 (67%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +    NI  V ++ G  H LA+S TG+V+AWG+  D +LGLGN++ + +PQLV +LS+K 
Sbjct: 3627 VQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKC 3686

Query: 69   IRQVSAGRSHSAA 81
            I  ++ G  HSAA
Sbjct: 3687 IIDIACGGFHSAA 3699



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 1/84 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +++NG LYT+G GDY RLGHG++ + + P+ V  L    +   S G  H 
Sbjct: 3796 IDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHV 3855

Query: 474  VCIADKGKAVYAFGDGEYGKLGLG 497
            + + D G+ VYA+GD + G+LG G
Sbjct: 3856 LALTDDGE-VYAWGDNDEGQLGDG 3878



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 43/80 (53%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   K + I  I+VGT H +AVS  G V+ WG+N   Q G G     +EP+LV   +N  
Sbjct: 2884 VNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNFNNIK 2943

Query: 69   IRQVSAGRSHSAAWTAPPLP 88
            I +V  G S S AW  P LP
Sbjct: 2944 INRVGCGSSQSIAWKCPVLP 2963



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 61/103 (59%), Gaps = 5/103 (4%)

Query: 407  LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            + Y+   +ACG     +  VTS+  ++++G+GDYG+LGH  + + K+P ++ +L+   + 
Sbjct: 3735 INYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGII 3794

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKPTP 505
             + CG   +V ++  G  +Y +G G+Y +LG G++    KP P
Sbjct: 3795 QIDCGSQFSVALSANG-TLYTWGKGDYFRLGHGSSEHVRKPKP 3836



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 12/163 (7%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVPLTFAN 405
            + ++L A++ I + G +++ F  I+  E     C  G S  GR+     G  S P     
Sbjct: 2619 FNEALTALKPIEIVGGSKSLF--IVSNEGKVFVC--GDSSGGRLGIPFCGKVSSPRQIPG 2674

Query: 406  RLQYY--EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
              Q+     A+  G KH+  ++ +G + ++G+G+ G+LGHG  +    P+ + +L    V
Sbjct: 2675 LSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRV 2734

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              ++CG  H+  I   G+ +Y +G G+YG+LG  +   + TP+
Sbjct: 2735 FYIACGSAHSAAITSDGE-LYTWGQGQYGRLGHSDEVSQHTPK 2776



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 1/93 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T+ G ++T+G G+Y RLG G   + + P  V  L  V ++ ++ G  H 
Sbjct: 2843 IECGAQFSVALTATGQVWTWGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHC 2902

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++ +G  VY +GD ++G+ G G T     P+
Sbjct: 2903 IAVSTQGD-VYCWGDNDHGQQGNGTTNANQEPR 2934



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 3/86 (3%)

Query: 414  IACGFKHSAVVT--SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG + +  +   S G +Y++G+GD+G+LG G +     P++V  L    V  + CG  
Sbjct: 2789 VACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQ 2848

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLG 497
             +V +   G+ V+ +G GEY +LGLG
Sbjct: 2849 FSVALTATGQ-VWTWGKGEYYRLGLG 2873



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G +H   +++ G +Y +G+GD G+LG G  +    P+ V +L+   +  ++CG 
Sbjct: 3635 KVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGG 3694

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             H+  I+  G  +Y +G G YG+LG G+
Sbjct: 3695 FHSAAISRYGH-LYTWGKGRYGRLGHGD 3721



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 4    TSGRHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
            +S R IP      I  ++V  G +H +A+S  G+V +WG+  D +LG G+ +    P+L+
Sbjct: 2667 SSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLI 2726

Query: 62   LALSNKNIRQVSAGRSHSAAWTA 84
             +L  K +  ++ G +HSAA T+
Sbjct: 2727 DSLLAKRVFYIACGSAHSAAITS 2749



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 7/88 (7%)

Query: 424  VTSNGYLYTFGNGDYGRLGHGTTMNWK-----VPERVVALNKVHVESVSCGLNHTVCIAD 478
            VTS G +Y  G  + GRLG G   N K      P+ V  LN +   +V+ G  H + ++ 
Sbjct: 3592 VTSYGKVYASGYTESGRLGIGP-YNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALST 3650

Query: 479  KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             G+ VYA+GDG+ GKLGLGN      PQ
Sbjct: 3651 TGE-VYAWGDGDDGKLGLGNRVTHSKPQ 3677



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            IA G  H   V++ G +Y +G+ D+G+ G+GTT   + P  V   N + +  V CG + +
Sbjct: 2895 IAVGTLHCIAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNFNNIKINRVGCGSSQS 2954

Query: 474  V 474
            +
Sbjct: 2955 I 2955



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 424 VTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNHTVCIADKGKA 482
           VT  G +Y++G  ++G LGHG   + +  PE +VA +K+ V  VSCG +    + + GK 
Sbjct: 507 VTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDGK- 565

Query: 483 VYAFG 487
           +Y +G
Sbjct: 566 LYMWG 570



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 9/95 (9%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            I+DI+ G  H  A+S  G ++ WG     +LG G+  +Y  P+LV  L N ++ +V+ G 
Sbjct: 3687 IIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGS 3746

Query: 77   ---------SHSAAWTAPPLPPHTPGHTPSSSLRL 102
                     S    W+         GH  S S +L
Sbjct: 3747 GDAQTMCVTSDDNVWSWGDGDYGKLGHNISESCKL 3781



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 33/56 (58%)

Query: 20   ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
            I+ G+ H  A+++ G+++ WG     +LG  ++++   P+LV     KNI QV+ G
Sbjct: 2737 IACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACG 2792



 Score = 42.0 bits (97), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 33/65 (50%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            +V I  G +  +A++ TGQV+ WG     +LGLG   + R P LV  L    I  ++ G 
Sbjct: 2840 VVQIECGAQFSVALTATGQVWTWGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGT 2899

Query: 77   SHSAA 81
             H  A
Sbjct: 2900 LHCIA 2904



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 32/63 (50%)

Query: 417  GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
            G  H   +T +G +Y +G+ D G+LG GT      P  + AL    ++ VSCG  H+   
Sbjct: 3851 GSLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSFAW 3910

Query: 477  ADK 479
            A +
Sbjct: 3911 ASE 3913



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQV 72
           N+ +  + V  E  LAV+  G+V++WG N    LG G +  ++  P+ ++A S   +  V
Sbjct: 491 NVPMKSVDVYDETYLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMV 550

Query: 73  SAGRSHSAAWT 83
           S G+   AA T
Sbjct: 551 SCGKDFCAAVT 561


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 187/365 (51%), Gaps = 36/365 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I+ I+ G+ H +A S+ G+VF WG+N + QLG G     + P+LV AL  
Sbjct: 4221 RKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQG 4280

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+       T   T S      +P   P  Y  ++  P  ++R R
Sbjct: 4281 KKITRVACGSAHTLAWS-------TAKATQSR-----MPASAPMEYDLVKEIPFSVLRNR 4328

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+ F++L+   + + P  G    D              L P+    +      + V 
Sbjct: 4329 LVLLHHFAELLCPALAMFPTTGPTGLD-------------KLGPMLVYTIKEATFRKVVQ 4375

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP + + R+  K  +          +K +F Q+  ++  +    L LP R 
Sbjct: 4376 ATMVRDRQHGPVIELNRIQVKRARGKGGYAGPDGIKSVFGQMVSKMSLLTQDVLFLPHRV 4435

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G++PLL+ TPNG  D G NRD ++LN   S
Sbjct: 4436 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSLPLLMPTPNGRDDNGTNRDCFLLN-SFS 4494

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
            ES   +  F+FLGIL G+AIRT  PL L L+  VWK +   P+T +DL + D  Y   L 
Sbjct: 4495 ESQLHMTMFQFLGILMGIAIRTGSPLSLNLAEPVWKQLAGMPLTPSDLTEIDRDYVPGLL 4554

Query: 357  AIRDI 361
             IRD+
Sbjct: 4555 CIRDM 4559



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS G+LYT+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 4076 IACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDA 4135

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4136 QTLCVTDDDN-VWSWGDGDYGKLGRGGS 4162



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--N 471
           IACG  +SA ++++G LYT+G G+YGRLGHG+  +  VP  V  L    V  V+CG   +
Sbjct: 566 IACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDS 625

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+C+   G  V+++GDG+YGKLG G +    TP+
Sbjct: 626 QTLCVTASG-IVFSWGDGDYGKLGRGGSDGSKTPK 659



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 3/94 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA + SNG LYT+G G+YGRLGHG T     P+ V AL+   V  V+CG    
Sbjct: 3095 IACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDA 3154

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             T+ +   G  VY +GDG++GKLG G +    TP
Sbjct: 3155 QTMSLTADG-CVYTWGDGDFGKLGRGGSDGCYTP 3187



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VPL   +        + CG + S  +T +G +YT+G GDY RLGHGT  + + P 
Sbjct: 4162 SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPR 4221

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V AL    + S++ G  H V  +DKG+ V+ +GD + G+LG G T     P+
Sbjct: 4222 KVAALQGKKIISIATGSLHCVACSDKGE-VFTWGDNDEGQLGDGTTSALQRPR 4273



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 6/159 (3%)

Query: 352  AQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPLTFANRLQYY 410
             +SL A+R I L+G  +  F      + +  G    GR+    T    VP T    +Q+ 
Sbjct: 3959 CESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDSVMVP-TLLESIQHV 4017

Query: 411  ---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
               + A+  G KH   ++S G++Y++G GD G+LGHG  +++  P+ V  L  + +  ++
Sbjct: 4018 FIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIA 4077

Query: 468  CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            CG +H+  I   G  +Y +G G YG+LG G++  +  P+
Sbjct: 4078 CGGHHSAAITSAG-WLYTWGKGRYGRLGHGDSDDQLRPK 4115



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 12/162 (7%)

Query: 352  AQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVP--LTFA 404
            ++ L  ++ IH++G ++  F  I+  E     C EG +  GR+          P  + F 
Sbjct: 2978 SEVLSKLKPIHIAGGSKTLF--IVSQEGKLYACGEGTN--GRLGLGDDYNMCEPKLIPFL 3033

Query: 405  NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            ++    + A+  G KH+  +T +G ++++G G+ G+LGHG       P  + +L    + 
Sbjct: 3034 SQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIR 3093

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++CG  H+  IA  G+ +Y +G GEYG+LG G+T  +  P+
Sbjct: 3094 DIACGSGHSAAIASNGE-LYTWGLGEYGRLGHGDTATQMKPK 3134



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 45/74 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++TGQV+AWG+N   Q G G  I  R+P LV  L +  
Sbjct: 3242 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPSLVHELDDTR 3301

Query: 69   IRQVSAGRSHSAAW 82
            + +VS G SHS AW
Sbjct: 3302 MNRVSCGSSHSIAW 3315



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T  G ++T+G GDY RLGHG   + + P  V  L    +  V+ G  H 
Sbjct: 3201 VECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHC 3260

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3261 LAVTDTGQ-VYAWGDNDHGQQGNGTTIVNRKP 3291



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 1/80 (1%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           KH   +T +G +Y++GNGD GRLGHG  ++   P+ +  L + ++  ++CG  ++  ++ 
Sbjct: 519 KHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSA 578

Query: 479 KGKAVYAFGDGEYGKLGLGN 498
            G+ +Y +G G YG+LG G+
Sbjct: 579 SGE-LYTWGRGNYGRLGHGS 597



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 4/94 (4%)

Query: 407  LQYYEAA-IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            LQ Y+   +ACG     +  VT +  ++++G+GDYG+LG G +   KVP ++ +L  + V
Sbjct: 4120 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGV 4179

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              V CG   +V +   G AVY +G G+Y +LG G
Sbjct: 4180 IKVECGSQFSVALTRSG-AVYTWGKGDYHRLGHG 4212



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 41/67 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V +  G +H LA++  G+VF+WG   D +LG GN     +P+L+ +L +K IR ++ 
Sbjct: 3038 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIAC 3097

Query: 75   GRSHSAA 81
            G  HSAA
Sbjct: 3098 GSGHSAA 3104



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGFKHSAVV--TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG + +  +  T++G +YT+G+GD+G+LG G +     P  V  LN + V  V CG  
Sbjct: 3147 VACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQ 3206

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G+ V+ +G G+Y +LG GN
Sbjct: 3207 FSLALTKYGE-VWTWGKGDYFRLGHGN 3232



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSA--VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG   S    VT++G ++++G+GDYG+LG G +   K P+ V  L  ++V  V CG  
Sbjct: 618 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQ 677

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +  +  +G+ VY +G G+  +LG GN
Sbjct: 678 FSAALTARGE-VYTWGKGDAYRLGHGN 703



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G V++WG   D +LG GN+++Y  P+LV  L    I  ++ 
Sbjct: 4019 IKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIAC 4078

Query: 75   GRSHSAAWTA 84
            G  HSAA T+
Sbjct: 4079 GGHHSAAITS 4088



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 1/101 (0%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           + G   P      L      + CG + SA +T+ G +YT+G GD  RLGHG   + + P+
Sbjct: 652 SDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPK 711

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL 494
            + +L    ++ +S G  H + + +  + VY +G  +YG++
Sbjct: 712 LIESLRDKKIKDLSVGGTHILALTED-QFVYGWGRNDYGQI 751



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 40/60 (66%)

Query: 25  EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
           +H LA++  G V++WGN    +LG G+ I++ EP+L+  L  KNI  ++ G ++SAA +A
Sbjct: 519 KHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSA 578



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 41/69 (59%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + K+  I DI+ G+ H  A+++ G+++ WG     +LG G+     +P+LV ALS 
Sbjct: 3082 RLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQALSG 3141

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3142 QRVVQVACG 3150



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)

Query: 3   GTSGRHIPA----FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
           G+ G   P       +I++V +  G +   A++  G+V+ WG     +LG GN+ + R P
Sbjct: 651 GSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYP 710

Query: 59  QLVLALSNKNIRQVSAGRSHSAAWT 83
           +L+ +L +K I+ +S G +H  A T
Sbjct: 711 KLIESLRDKKIKDLSVGGTHILALT 735



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT+  + P  V  L+   +  VSCG +H+
Sbjct: 3253 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPSLVHELDDTRMNRVSCGSSHS 3312

Query: 474  V 474
            +
Sbjct: 3313 I 3313



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG--LGNQINYREPQLVLALSN 66
           I + ++  I D+SVG  H+LA++    V+ WG N   Q+   LG  ++  EP L   LS+
Sbjct: 713 IESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQIDPTLGPVVS--EPSLCPTLSS 770

Query: 67  KNIRQVSAGRSHSAAW 82
           KN+  +++G + S AW
Sbjct: 771 KNVIGLASGPTQSFAW 786



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G ++T+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4233 SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAH 4292

Query: 473  TV 474
            T+
Sbjct: 4293 TL 4294



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G + P        + +V +  G +  LA++  G+V+ WG     +LG GN  + R+P
Sbjct: 3180 GSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP 3239

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
             LV  L  K I  V+ G  H  A T
Sbjct: 3240 TLVEGLRGKKIVHVAVGALHCLAVT 3264



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I IVDI+ G  H  A+++ G ++ WG     +LG G+  +   P++V AL +  +  V+ 
Sbjct: 4071 IEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVAC 4130

Query: 75   G 75
            G
Sbjct: 4131 G 4131



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 5/77 (6%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   K IHI     G++ +  VS  G+++A G  ++ +LGLG+  N  EP+L+  LS   
Sbjct: 2981 LSKLKPIHIAG---GSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYV 3037

Query: 69   IRQVS--AGRSHSAAWT 83
            I++V+  +G  H+ A T
Sbjct: 3038 IKKVAVHSGGKHALALT 3054



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K   +V ++ G+     L V+ +G VF+WG+    +LG G     + P++V  L +
Sbjct: 607 VTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLD 666

Query: 67  KNIRQVSAGRSHSAAWTA 84
            N+ +V  G   SAA TA
Sbjct: 667 INVVRVFCGGQFSAALTA 684


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 193/365 (52%), Gaps = 34/365 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S+ G+VF WG+N + QLG G     + P+LV AL  
Sbjct: 4503 KKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQG 4562

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K+I +V+ G +H+ A +   L           S RL    + P  Y  +++ P   + AR
Sbjct: 4563 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDLPPEALHAR 4611

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ FS+L+   + +LP+               L   +L+ +    +      + +  
Sbjct: 4612 LILLHHFSELLCPCLAMLPISGD------------LSLGALKDVLVYNIKEAAFRKVIQT 4659

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  K  GP + + R+  K  ++          +K +F Q+ +++  +    L LP R 
Sbjct: 4660 TMVRDKQHGPVIELNRIQVKRSRSRCNGLAGVDGMKSVFGQMVQKLPLLTQEALALPHRV 4719

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G+VPLL+ TPNG  + G NRD ++L+P L+
Sbjct: 4720 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLISTPNGRGEAGANRDCFLLDPTLT 4779

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              LQ  M F+FLG+L G+A+RT  PL L L+  VW+ +  EP+  TDL + D  Y   L 
Sbjct: 4780 SVLQMNM-FRFLGVLMGIAVRTGSPLSLNLAEPVWRQLTGEPLRPTDLTEVDRDYVAGLL 4838

Query: 357  AIRDI 361
             IR++
Sbjct: 4839 CIRNM 4843



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA ++S G LYT+G G+YGRLGHG       P+ V AL+   V  V+CG    
Sbjct: 3205 IACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDA 3264

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + + G AV+++GDG++GKLG G +    TP 
Sbjct: 3265 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSSTPH 3298



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN- 471
           ++ CG  +SA +T  G LYT+G G YGRLGHGT+ +  +P  V+AL    V  V+ G   
Sbjct: 701 SVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGD 760

Query: 472 -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT+C+  +G  V+A+GDG+YGKLG G+      PQ
Sbjct: 761 AHTLCLTSEG-LVFAWGDGDYGKLGNGSCNSSLLPQ 795



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 3/90 (3%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            A IACG  HSA +T++G++ T+G G YGRLGHG + +   P+ V AL       ++CG  
Sbjct: 4356 ADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSG 4415

Query: 472  --HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
               T+CI D    V+++GDG+YGKLG G +
Sbjct: 4416 DAQTLCITDDDN-VWSWGDGDYGKLGRGGS 4444



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 11/188 (5%)

Query: 324  LPLSPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANF---PEIIPLEC 379
            LP + +VW L  +E +      +     ++ ++  +R IH++G +++ F    +     C
Sbjct: 3059 LPCTVMVWGLNDKEQLGGLKGSKVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYAC 3118

Query: 380  FEGASWTGRITPIVTGGQSVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGNGD 437
             EG +  GR+   VT    +P       QY   + A+  G KH+  +T +G ++++G G+
Sbjct: 3119 GEGTN--GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGE 3176

Query: 438  YGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
             G+LGHG       P  V AL    +  ++CG +H+  I+ +G+ +Y +G GEYG+LG G
Sbjct: 3177 DGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGE-LYTWGLGEYGRLGHG 3235

Query: 498  N--TGLKP 503
            +  T LKP
Sbjct: 3236 DNATQLKP 3243



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 1/96 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   +T++G +Y +G G+ G+LGHG  M++  P+ V  LN + V  ++CG 
Sbjct: 4303 KVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGS 4362

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H+  I   G  V  +G G YG+LG G++  +  P+
Sbjct: 4363 AHSAAITASGH-VLTWGKGRYGRLGHGDSEDQLRPK 4397



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GD+ RLGHG+  + + P++V AL    + S++ G  H 
Sbjct: 4464 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHC 4523

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
            V  +D G+ V+ +GD + G+LG G 
Sbjct: 4524 VACSDAGE-VFTWGDNDEGQLGDGT 4547



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P+ +  L    V  V+ G  H 
Sbjct: 3311 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHC 3370

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 3371 LAVTDAGQ-VYAWGDNDHGQQGSGNTFVNKKP 3401



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV++ GQV+AWG+N   Q G GN    ++P LV+ L    
Sbjct: 3352 IAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVI 3411

Query: 69   IRQVSAGRSHSAAWTAP 85
            + +V+ G SHS AW  P
Sbjct: 3412 VNRVACGSSHSMAWGLP 3428



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 45/67 (67%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V ++ G +H LA++  G+V+AWG   D +LG GN+++Y  P+LV  L+  ++  ++ G +
Sbjct: 4304 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA 4363

Query: 78   HSAAWTA 84
            HSAA TA
Sbjct: 4364 HSAAITA 4370



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 41/64 (64%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V +  G +H LA++  G+VF+WG   D +LG GN+    +P+LV AL  K IR ++ G S
Sbjct: 3151 VAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSS 3210

Query: 78   HSAA 81
            HSAA
Sbjct: 3211 HSAA 3214



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 407  LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            L Y    IACG     +  +T +  ++++G+GDYG+LG G +   K+P ++ +L  + V 
Sbjct: 4403 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVI 4462

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             V CG   +V +   G AVY +G G++ +LG G+
Sbjct: 4463 KVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGS 4495



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           +   A  C  +H   V SN   Y++G GD  RLGHG     ++P ++ +L ++ V+SV C
Sbjct: 646 FISIAAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRL-VKSVYC 704

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           G +++  I   G  +Y +G G YG+LG G +  +  P
Sbjct: 705 GCSYSAAITLGGN-LYTWGRGTYGRLGHGTSDDQCLP 740



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC--GLN 471
            IA G K   VV+ +G +Y  G G  GRLG G T N  +P ++  L++  V+ V+   G  
Sbjct: 3099 IAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3158

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H + +   GK V+++G+GE GKLG GN      P+
Sbjct: 3159 HALALTLDGK-VFSWGEGEDGKLGHGNRSTLDKPR 3192



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G ++++G+GD+G+LG G +     P  +  L+ + V  + CG  
Sbjct: 3257 VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQ 3316

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 3317 FSLALTRAGE-VWTWGKGDYYRLGHGGDQHVRKPQ 3350



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I DI+ G+ H  A+S+ G+++ WG     +LG G+     +P+LV ALS 
Sbjct: 3192 RLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALSG 3251

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3252 RRVIQVACG 3260



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G ++T+G+ D G+LG GT    + P  V AL   H+  V+CG  H
Sbjct: 4515 SIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 4574

Query: 473  TVCIA 477
            T+ ++
Sbjct: 4575 TLALS 4579



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G G T   K P  V+ L+ V V  V+CG +H+
Sbjct: 3363 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVIVNRVACGSSHS 3422

Query: 474  V 474
            +
Sbjct: 3423 M 3423



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           Q  + A+  G  H+  +TS G ++ +G+GDYG+LG+G+  +  +P+ +  L +  V+ V 
Sbjct: 750 QVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPR--VQRVF 807

Query: 468 CGLNHTVCIADKGKAVYAFG 487
            G   ++ ++ +G+ +Y++G
Sbjct: 808 AGAQFSLALSCEGQ-LYSWG 826



 Score = 45.1 bits (105), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 28/41 (68%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
           R I   ++  IVD++VG  H LA+S++G++F WG N + Q+
Sbjct: 847 RLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQI 887



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)

Query: 2    SGTSGRH-IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
             G+S  H I     I ++ I  G +  LA++  G+V+ WG     +LG G   + R+PQ 
Sbjct: 3292 EGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP 3351

Query: 61   VLALSNKNIRQVSAGRSHSAAWT 83
            +  L    +  V+ G  H  A T
Sbjct: 3352 IAGLRGHRVIHVAVGALHCLAVT 3374



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A K+  +VD+++G+   H L +++ G VFAWG+    +LG G+  +   PQL+  L  
Sbjct: 743 VMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCL-- 800

Query: 67  KNIRQVSAGRSHSAA 81
             +++V AG   S A
Sbjct: 801 PRVQRVFAGAQFSLA 815



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 35/75 (46%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            MS    + +     + + DI+ G+ H  A++ +G V  WG     +LG G+  +   P+L
Sbjct: 4339 MSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKL 4398

Query: 61   VLALSNKNIRQVSAG 75
            V AL       ++ G
Sbjct: 4399 VEALLGYRAIDIACG 4413


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 204/404 (50%), Gaps = 33/404 (8%)

Query: 11   AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
            A +   ++ ++VG+ H +A +++G+VF WG+N + QLG G+    + P+LV +L  K + 
Sbjct: 3913 ALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMN 3972

Query: 71   QVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLL 130
            +V+ G +H+ +W+       T            LP  IP  Y HL++  +  +R R  LL
Sbjct: 3973 RVACGSAHTVSWSTSKSAHKTVTQ---------LPTQIPLEYDHLKDISMQQLRNRYCLL 4023

Query: 131  NRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGKTMLV 190
              F+++    + LL L          +P++      L+ L           + V  TM+ 
Sbjct: 4024 FLFNEMFCPTIPLLDLS-------PGSPFN-----CLKGLLMLNGKETAFRKIVQTTMVR 4071

Query: 191  GKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAG 250
             +  GP V + R++  +  T K +FAQ+  ++  +    L LP R WKVK +GE  DD G
Sbjct: 4072 DRQHGPVVELNRMSNPA--TRKTVFAQMVAKMSLLTPECLLLPHRVWKVKFVGESVDDCG 4129

Query: 251  GVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGI 310
            G + ++I EMC EL  G VPLL  TPNG  + G +RD ++ NP+ +   +    FKFLGI
Sbjct: 4130 GGYSESIAEMCEELQKGNVPLLTLTPNGREEAGTSRDCFLFNPEATSVYREW--FKFLGI 4187

Query: 311  LFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEAN 370
            L GVAIRT  PL + L+  +WKL+  + +T TDL + D  Y   L  IRD+     +   
Sbjct: 4188 LMGVAIRTGSPLSINLAEPMWKLLTGDSLTVTDLNEVDRDYVPGLMYIRDLDADAFSRL- 4246

Query: 371  FPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
              E IP   F   S  G    +    + + +T  NRL+Y   AI
Sbjct: 4247 --ESIP---FVTHSCVG--NQVALSSKFMNVTIENRLEYIRLAI 4283



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 1/94 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG  HSA VTS+G LYT+G+G+YGRLGHG  +    P++V AL+   V  V+CG    
Sbjct: 2796 VACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDA 2855

Query: 474  VCIA-DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              +A  +   VY++GDG++GKLG G +     PQ
Sbjct: 2856 QTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQ 2889



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 3/96 (3%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN- 471
            ++ACG  HSA +T++G LYT+G G YGRLGHG + +   P++V  L   +V  V+CG   
Sbjct: 3762 SVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGD 3821

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              T+C++  G  V+++GDG+YGKLG G +     PQ
Sbjct: 3822 AQTLCVSRDG-LVWSWGDGDYGKLGRGGSDGCKFPQ 3856



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   +TS+G ++++G GD G+LGHG+    + P+ + +L   HV SV+CG 
Sbjct: 3708 QVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGG 3767

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G+ +Y +G G YG+LG G++   LKP
Sbjct: 3768 AHSACITASGE-LYTWGKGRYGRLGHGDSEDQLKP 3801



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G S+P             + CG + S  ++ NG ++T+G GDY RLGHG+  + + P+
Sbjct: 2882 SDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQ 2941

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             V  L   +V  VS G  H + + D+G+ VYA+GD ++G+ G GNT +   P
Sbjct: 2942 VVEELADKNVIQVSVGALHCIAVTDRGE-VYAWGDNDHGQQGNGNTTVNRKP 2992



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 3/110 (2%)

Query: 396  GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
             Q  PLT  +     + A+  G +H+  +T +G ++++G G+ G+LGHG  +++  P+ V
Sbjct: 2726 AQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLV 2785

Query: 456  VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             +L    +  V+CG +H+  +   G+ +Y +G GEYG+LG G+    LKP
Sbjct: 2786 ESLKCKRIRDVACGSSHSAAVTSSGE-LYTWGSGEYGRLGHGDNVPQLKP 2834



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 45/70 (64%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V +  G  H LA++  G+VF+WG   D +LG GN+I+Y  P+LV +L  K IR V+ 
Sbjct: 2739 IKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVAC 2798

Query: 75   GRSHSAAWTA 84
            G SHSAA T+
Sbjct: 2799 GSSHSAAVTS 2808



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 2/94 (2%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
            + CG + S  +T+ G +YT+G GDY RLGHG+  + + P+ V  AL    V  V+ G  H
Sbjct: 3869 VECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLH 3928

Query: 473  TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             V   D G+ V+ +GD + G+LG G+T     P+
Sbjct: 3929 CVACTDSGE-VFTWGDNDEGQLGDGSTNAIQRPK 3961



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  V+ +G ++++G+GDYG+LG G +   K P+++ +L    V  V CG  
Sbjct: 3815 VACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQ 3874

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +V +   G  VY +G G+Y +LG G+      PQ
Sbjct: 3875 FSVALTAAG-VVYTWGKGDYHRLGHGSEDHVRRPQ 3908



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +    + +++ +SVG  H +AV++ G+V+AWG+N   Q G GN    R+P +V  L  + 
Sbjct: 2943 VEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNTTVNRKPAIVRGL--EA 3000

Query: 69   IRQVSAGRSHSAAWTAPPLPPH 90
            I  V+ G SHS AW++    P 
Sbjct: 3001 ITNVACGSSHSVAWSSTGTSPQ 3022



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T   ++Y++G+GD+G+LG G +    +P+ V  LN   V  V CG  
Sbjct: 2848 VACGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQ 2907

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ ++  GK V+ +G G+Y +LG G+      PQ
Sbjct: 2908 FSLALSKNGK-VWTWGKGDYFRLGHGSDSHVRWPQ 2941



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 2/78 (2%)

Query: 9    IPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            I   +++ +  ++V  G +H LA++++G VF+WG   D +LG G++     P+L+ +L +
Sbjct: 3698 IETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRD 3757

Query: 67   KNIRQVSAGRSHSAAWTA 84
            K++  V+ G +HSA  TA
Sbjct: 3758 KHVVSVACGGAHSACITA 3775



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G  +P       +  ++ +  G +  LA+S  G+V+ WG     +LG G+  + R P
Sbjct: 2881 GSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWP 2940

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
            Q+V  L++KN+ QVS G  H  A T
Sbjct: 2941 QVVEELADKNVIQVSVGALHCIAVT 2965



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 42/67 (62%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            + + K   I D++ G+ H  AV+++G+++ WG+    +LG G+ +   +P+ V ALS++ 
Sbjct: 2785 VESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHER 2844

Query: 69   IRQVSAG 75
            + QV+ G
Sbjct: 2845 VVQVACG 2851



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC--GLN 471
            IA G K   +V+ +G ++  G G  GRLG G + N   P+ +  L+   ++ V+   G  
Sbjct: 2690 IAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGR 2749

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H + +   G+ V+++G+GE GKLG GN
Sbjct: 2750 HALALTIDGR-VFSWGEGEDGKLGHGN 2775



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H    T +G ++T+G+ D G+LG G+T   + P+ V +L    +  V+CG  HT
Sbjct: 3922 VAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHT 3981

Query: 474  V 474
            V
Sbjct: 3982 V 3982



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 37/67 (55%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I + ++ H+V ++ G  H   ++ +G+++ WG     +LG G+  +  +P+ V  L+  N
Sbjct: 3752 IESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHN 3811

Query: 69   IRQVSAG 75
            +  V+ G
Sbjct: 3812 VLDVACG 3818



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 16   HIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
            +++D++ G+     L VS  G V++WG+    +LG G     + PQ + +L N  + +V 
Sbjct: 3811 NVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVE 3870

Query: 74   AGRSHSAAWTA 84
             G   S A TA
Sbjct: 3871 CGSQFSVALTA 3881



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++ G  H   VT  G +Y +G+ D+G+ G+G T   + P  V  L    + +V+CG +H+
Sbjct: 2954 VSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNTTVNRKPAIVRGLEA--ITNVACGSSHS 3011

Query: 474  VCIADKGKAVYAFGD 488
            V  +  G +     D
Sbjct: 3012 VAWSSTGTSPQKLHD 3026



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 2/74 (2%)

Query: 12   FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
              N+  ++I+ G++ +  VS+ G+VFA G  ++ +LGLG+  N  +P+ +  LS   I++
Sbjct: 2682 ISNLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKK 2741

Query: 72   VS--AGRSHSAAWT 83
            V+  +G  H+ A T
Sbjct: 2742 VAVHSGGRHALALT 2755


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 190/364 (52%), Gaps = 34/364 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I+ I+ G+ H +A ++ G+VF WG+N + QLG G     + P+LV AL  
Sbjct: 4242 RKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQG 4301

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+       T   T S      +P   P  Y  +++ P P++  R
Sbjct: 4302 KKITRVACGSAHTLAWS-------TMKATQSK-----MPATTPMEYDLVKDLPFPVLHNR 4349

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ F++L+   + + P+           P S      L P+    +      + V  
Sbjct: 4350 LVLLHHFAELLCPCLPMYPITG---------PVSL---SKLAPILVYSIKEATFRKVVQA 4397

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP + + R+  K  ++         +K +F Q+  ++  +    L  P R W
Sbjct: 4398 TMVRDRQHGPVIELNRIQVKRARSKGGLAGPDGIKSVFGQMVSKISLLTQDVLFFPHRIW 4457

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK +GE  DD GG + ++I EMC EL +G++PLL+ TPNG  D+G NRD ++LNP +++
Sbjct: 4458 KVKFIGESVDDCGGGYSESIAEMCDELQNGSLPLLIPTPNGRDDSGTNRDCFLLNP-IAD 4516

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
            S   +  F+FLGIL G+AIRT  PL L L+  VWK +    +T  DL + D  Y   L  
Sbjct: 4517 SPLHMNMFRFLGILMGIAIRTGSPLSLNLAEPVWKQLAGISLTPADLTEIDRDYVPGLLC 4576

Query: 358  IRDI 361
            IRD+
Sbjct: 4577 IRDM 4580



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--N 471
           IACG  +SA ++SNG LYT+G G+YGRLGHG + N  +P  V ALN   V  V+CG   +
Sbjct: 562 IACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDS 621

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+C+   G  V+++GDG YGKLG G      TP+
Sbjct: 622 QTLCVTASG-IVFSWGDGNYGKLGRGGCDGSKTPK 655



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS G+LYT+G G YGRLGHG + +   P+ + AL    V  V+CG    
Sbjct: 4097 IACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDA 4156

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4157 QTLCVTDDDN-VWSWGDGDYGKLGRGGS 4183



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 87/162 (53%), Gaps = 8/162 (4%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVPLTFA 404
            +Y++ L  ++ +H++G ++  F  ++  E     C EG +    +       +  P+ F 
Sbjct: 2959 VYSEVLSKLKPVHIAGGSKTLF--VVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFL 3016

Query: 405  NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            ++    + ++  G KH+  +T +G ++++G G+ G+LGHG +++   P  + +L    + 
Sbjct: 3017 SQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIR 3076

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++CG  H+  I   G+ +Y +G GEYG+LG G+T  +  P+
Sbjct: 3077 DIACGSGHSAAITSSGE-LYTWGLGEYGRLGHGDTATQSKPK 3117



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            IACG  HSA +TS+G LYT+G G+YGRLGHG T     P+ V +L    +  ++CG    
Sbjct: 3078 IACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDA 3137

Query: 474  VCIADKGKA-VYAFGDGEYGKLGLGNTGLKPTP 505
              +A      VY++GDG++GKLG G +    TP
Sbjct: 3138 QTMALTADGLVYSWGDGDFGKLGRGGSDGCYTP 3170



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 6/159 (3%)

Query: 352  AQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPLTFANRLQYY 410
             +SL A+R + L+G  +  F      + +  G    GR+    T    VP T    +Q+ 
Sbjct: 3980 CESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVP-TLLESIQHV 4038

Query: 411  ---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
               + A+  G KH   ++S G++Y++G GD G+LGHG  +++  P+ +  L    +  ++
Sbjct: 4039 FVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIA 4098

Query: 468  CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            CG +H+  I   G  +Y +G G YG+LG G++  + TP+
Sbjct: 4099 CGGHHSAAITSAG-WLYTWGKGRYGRLGHGDSEDQLTPK 4136



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  +P+   +        + CG + S  +T +G +YT+G GDY RLGHGT  + + P 
Sbjct: 4183 SDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPR 4242

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V AL    + S++ G  H V   DKG+ V+ +GD + G+LG G T     P+
Sbjct: 4243 KVAALQGKKIISIATGSLHCVACTDKGE-VFTWGDNDEGQLGDGTTSALQRPR 4294



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 45/80 (56%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   ++ ++VG  H LAV++ GQV+AWG+N   Q G G  I  ++P LV  L +  
Sbjct: 3225 VEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDAR 3284

Query: 69   IRQVSAGRSHSAAWTAPPLP 88
            + +VS G SHS AW     P
Sbjct: 3285 VNRVSCGSSHSIAWVLTDQP 3304



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 45/70 (64%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V +  G +H LA++  G+VF+WG   D +LG GN I+  +P+L+ +L +K IR ++ 
Sbjct: 3021 IKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIAC 3080

Query: 75   GRSHSAAWTA 84
            G  HSAA T+
Sbjct: 3081 GSGHSAAITS 3090



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P  V  L    V  V+ G  H 
Sbjct: 3184 IECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHC 3243

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3244 LAVTDIGQ-VYAWGDNDHGQQGNGTTIVNKKP 3274



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 1/80 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           H   +T +  +Y++GNGD GRLGHG    +  P+ + AL + ++  ++CG  ++  ++  
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSN 575

Query: 480 GKAVYAFGDGEYGKLGLGNT 499
           G+ +Y +G G YG+LG GN+
Sbjct: 576 GE-LYTWGRGNYGRLGHGNS 594



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 4/94 (4%)

Query: 407  LQYYEAA-IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            LQ Y+   +ACG     +  VT +  ++++G+GDYG+LG G +   K+P ++ +L  + V
Sbjct: 4141 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4200

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              V CG   +V +   G A+Y +G G+Y +LG G
Sbjct: 4201 VKVECGSQFSVALTRSG-AIYTWGKGDYHRLGHG 4233



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFK--HSAVVTSNGYLYTFGNGDYGRLGHG 444
            GR+    T  QS P    + +      IACG +   +  +T++G +Y++G+GD+G+LG G
Sbjct: 3103 GRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG 3162

Query: 445  TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +     P  +  LN + V  + CG   ++ +   G+ V+ +G G+Y +LG GN
Sbjct: 3163 GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGE-VWTWGKGDYFRLGHGN 3215



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V ++ G +H LA+S+ G V++WG   D +LG GN+++Y  P+L+  L    I  ++ G  
Sbjct: 4043 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGH 4102

Query: 78   HSAAWTA 84
            HSAA T+
Sbjct: 4103 HSAAITS 4109



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSA--VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG   S    VT++G ++++G+G+YG+LG G     K P+ V  L  ++V  V CG  
Sbjct: 614 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQ 673

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +  +   G+ VY +G GE  +LG GN
Sbjct: 674 FSAALTAYGE-VYTWGKGEAYRLGHGN 699



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 3/111 (2%)

Query: 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           G   P      L    A + CG + SA +T+ G +YT+G G+  RLGHG   + + P+ +
Sbjct: 650 GSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKII 709

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL--GLGNTGLKPT 504
             L    V+ +  G  H + + +  + +Y +G  +YG++   LG    +PT
Sbjct: 710 DILKTKKVKELCVGNLHVLALTED-QLIYGWGRNDYGQIDPALGTVVPEPT 759



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I I   S GT H LA++    V++WGN    +LG G++  Y EP+L+ AL  KNI  ++ 
Sbjct: 506 IMIASHSDGT-HYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIAC 564

Query: 75  GRSHSAAWTA 84
           G ++SAA ++
Sbjct: 565 GSTYSAALSS 574



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT+  K P  V  L+   V  VSCG +H+
Sbjct: 3236 VAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHS 3295

Query: 474  V 474
            +
Sbjct: 3296 I 3296



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    T  G ++T+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4254 SIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAH 4313

Query: 473  TV 474
            T+
Sbjct: 4314 TL 4315



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + K+  I DI+ G+ H  A++++G+++ WG     +LG G+     +P+LV +L  
Sbjct: 3065 RLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVG 3124

Query: 67   KNIRQVSAGR--SHSAAWTAPPL 87
            + I Q++ G   + + A TA  L
Sbjct: 3125 QRIIQIACGSRDAQTMALTADGL 3147



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I     + +V I  G +  LA++  G+V+ WG     +LG GN  + R+P LV  L  K 
Sbjct: 3173 IDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK 3232

Query: 69   IRQVSAGRSHSAAWT 83
            +  V+ G  H  A T
Sbjct: 3233 VIHVAVGALHCLAVT 3247



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 39/74 (52%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           +I++  +  G +   A++  G+V+ WG     +LG GN+ + R P+++  L  K ++++ 
Sbjct: 662 DINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELC 721

Query: 74  AGRSHSAAWTAPPL 87
            G  H  A T   L
Sbjct: 722 VGNLHVLALTEDQL 735



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 34/67 (50%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I       IVDI+ G  H  A+++ G ++ WG     +LG G+  +   P+L+ AL +  
Sbjct: 4086 IEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYK 4145

Query: 69   IRQVSAG 75
            +  V+ G
Sbjct: 4146 VIDVACG 4152



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 35/74 (47%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   K   + ++ VG  HVLA++    ++ WG N   Q+         EP L   LS KN
Sbjct: 709 IDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKN 768

Query: 69  IRQVSAGRSHSAAW 82
           +  ++ G + S AW
Sbjct: 769 VIGLACGPTQSFAW 782



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 37/71 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A    +I  I+ G+ +  A+S+ G+++ WG  +  +LG GN  N   P LV AL+   
Sbjct: 551 IEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHM 610

Query: 69  IRQVSAGRSHS 79
           +  V+ G   S
Sbjct: 611 VVYVACGSGDS 621



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 23  GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAW 82
           G    L V+ +G VF+WG+ +  +LG G     + P++V  L + N+ +V  G   SAA 
Sbjct: 619 GDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAAL 678

Query: 83  TA 84
           TA
Sbjct: 679 TA 680



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS--AG 75
            V I+ G++ +  VS  G+++A G  ++ +LGLG+  N  EP+ +  LS   I++VS  +G
Sbjct: 2970 VHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSG 3029

Query: 76   RSHSAAWT 83
              H+ A T
Sbjct: 3030 GKHALALT 3037


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 202/420 (48%), Gaps = 42/420 (10%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   IV ++ G+ H +A ++ G+VF WG+N + QLG G      EP LV  L N
Sbjct: 4059 RKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVTVLEN 4118

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
              + +V  G +HS AW+     P   G+         +P  IP  + HL + PLP +R R
Sbjct: 4119 VKLNRVGCGSAHSFAWSTEA--PIDIGY---------MPNQIPVEFNHLHHLPLPALRNR 4167

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+RFS L+  V+ +  L     + + C     +   +L+ +    V      + +  
Sbjct: 4168 LILLHRFSSLVAPVINMFNLCQEASNDITC-----ITLDALKDILVSTVKENIFNKIIQA 4222

Query: 187  TMLVGKNFGPSVTVRRLTTK--------SKQTVKPIFAQISRQVVKMKGSDLRLPSRAWK 238
            TM+  +  G ++ + R+  K        S      +F Q+S  +      +L LP R WK
Sbjct: 4223 TMIRDRQHGQTIELNRIQVKRFNGKNKTSGNYDSSVFYQVSTAICASNSDNLLLPHRVWK 4282

Query: 239  VKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSES 298
            VK +GE  DD GG + ++I E+C EL +G +P+L+ TPNG  + G NRD +I+NP++  S
Sbjct: 4283 VKFVGESVDDCGGGYSESIAEICDELQNGLLPILIPTPNGRDEAGVNRDCFIINPEVRPS 4342

Query: 299  LQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAI 358
                   +F+G L G+AIRT  PL L ++   WK +    ++ +D+ + D  Y   L  I
Sbjct: 4343 ----QSHQFMGTLIGIAIRTGSPLSLNIAQPFWKQLTGRLLSLSDITEIDKDYVPGLLWI 4398

Query: 359  RDIHLSGVTEANFPEIIPLEC----FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            RD        AN  E     C    F   S +G+   +   G+   +T  NR +Y   A+
Sbjct: 4399 RD--------ANPEEFEIFACKEPTFSTPSASGK--EMHLSGEHSRVTLENRHEYVAKAL 4448



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 61/95 (64%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA VTSNG LYT+G G YGRLGHG + +  +P  V  L+  HV  V+CG    
Sbjct: 568 IACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDA 627

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT+ I DK   V+++GDG+YGKLG G +     P+
Sbjct: 628 HTLAI-DKDGIVWSWGDGDYGKLGRGGSDCCKVPK 661



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA VT++G LYT+G GDYGRLGHG +    +P++V AL    V  ++CG    
Sbjct: 3013 IACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDA 3072

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D    V+++GDG++GKLG G +     PQ
Sbjct: 3073 QTLALTD-NNCVWSWGDGDFGKLGRGGSEGCNIPQ 3106



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            I+CG  HSA +TS G LYT+G G YGRLGHG   +   P+ + AL    V  V+CG    
Sbjct: 3914 ISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDA 3973

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+ I D    V+++GDG+YGKLG G +
Sbjct: 3974 QTLAITDD-DCVWSWGDGDYGKLGRGGS 4000



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G   PL   + +      + CG + S  +T NG LYT+G GDY RLGHGT  + + P 
Sbjct: 4000 SDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPR 4059

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    + +V+ G  H V   D G+ V+ +GD + G+  LGN  L P P+
Sbjct: 4060 KVACLQGKQIVTVAAGSLHCVACTDAGE-VFTWGDNDEGQ--LGNGTLNPIPE 4109



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 2/94 (2%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNH 472
            IACG + S  +++ G ++T+G GDY RLGHG   +++ P+ +   L K  +  ++ G  H
Sbjct: 3119 IACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALH 3178

Query: 473  TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + + D G+ VY++GD ++G+ G GNT +   PQ
Sbjct: 3179 CLAVTDTGE-VYSWGDNDHGQQGNGNTTVNKRPQ 3211



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 63/99 (63%), Gaps = 3/99 (3%)

Query: 407  LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            L+  + ++  G +H+ V+TSN  ++++G+G+ G+LGHG  ++ + P ++ AL    +  +
Sbjct: 3855 LKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHI 3914

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGL--GNTGLKP 503
            SCG +H+  I  KG+ +Y +G G YG+LG   G+  LKP
Sbjct: 3915 SCGSSHSAAITSKGE-LYTWGKGRYGRLGHGDGDDCLKP 3952



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 4/103 (3%)

Query: 407  LQYYEAA-IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            LQ Y+   IACG +   +  +T N  ++++G+GD+G+LG G +    +P+++ AL    V
Sbjct: 3057 LQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNIPQKIDALCGRDV 3116

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              ++CG   ++ ++  GK V+ +G G+Y +LG GN     +PQ
Sbjct: 3117 CRIACGAQFSLALSTTGK-VWTWGKGDYYRLGHGNDSHYRSPQ 3158



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 12   FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
             K   I +I+VG  H LAV++TG+V++WG+N   Q G GN    + PQ+ L  L    I 
Sbjct: 3164 LKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICLGELDGVKIS 3223

Query: 71   QVSAGRSHSAAW 82
             ++ G SHS AW
Sbjct: 3224 HIACGSSHSIAW 3235



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           +H   ++S+G +Y++G+GD GRLGHG     + PE V  L    +  ++CG  ++  +  
Sbjct: 523 EHYLALSSDGCVYSWGSGDGGRLGHGDIR--REPELVKELVNKKITQIACGSTYSAAVTS 580

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G G YG+LG GN+  +  P
Sbjct: 581 NGE-LYTWGRGSYGRLGHGNSEDRLLP 606



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 3/108 (2%)

Query: 400  PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
            P    N       +IA G K   +VT +G +Y  G G  GRLG G T N  +P ++  LN
Sbjct: 2893 PTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLN 2952

Query: 460  KVHVESVSC--GLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               V+ V+   G  H++CI  +GK V+++G+G  GKLG G+   + +P
Sbjct: 2953 MHFVKKVTVHPGGRHSLCITREGK-VFSWGEGIDGKLGHGDVTSRLSP 2999



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 4/157 (2%)

Query: 353  QSLRAIRDIHLSGVTEANFPEIIPLECF-EGASWTGRITPIVTGGQSVPLTFANRLQYYE 411
            +++ A+R + ++G ++  F      + +  G    GR+    T   S+P+       ++ 
Sbjct: 2897 KNIAALRPVSIAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFV 2956

Query: 412  AAIAC--GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
              +    G +HS  +T  G ++++G G  G+LGHG   +   P  + AL    +  ++CG
Sbjct: 2957 KKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACG 3016

Query: 470  LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +H+  +   G+ +Y +G G+YG+LG G++     P+
Sbjct: 3017 SSHSAAVTADGE-LYTWGLGDYGRLGHGDSKTLHIPK 3052



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)

Query: 409  YYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y    +ACG     +  +T +  ++++G+GDYG+LG G +   K P R+ +L  + V  V
Sbjct: 3961 YKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKV 4020

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
             CG   +V +   G  +Y +G G+Y +LG G
Sbjct: 4021 ECGSQFSVALTKNGD-LYTWGKGDYYRLGHG 4050



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 14   NIHIVD---ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
            N+H V    +  G  H L ++  G+VF+WG   D +LG G+  +   P L+ AL +K I 
Sbjct: 2952 NMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIV 3011

Query: 71   QVSAGRSHSAAWTA 84
            +++ G SHSAA TA
Sbjct: 3012 EIACGSSHSAAVTA 3025



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 2/78 (2%)

Query: 9    IPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            I   +++ I  +SV  G  H + +++  +VF+WG+  D +LG G++++   P+ + AL  
Sbjct: 3849 IEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEALLG 3908

Query: 67   KNIRQVSAGRSHSAAWTA 84
            K I  +S G SHSAA T+
Sbjct: 3909 KQIVHISCGSSHSAAITS 3926



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I  +  +V  EH LA+S+ G V++WG+    +LG G+    REP+LV  L NK I Q++ 
Sbjct: 513 IKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDI--RREPELVKELVNKKITQIAC 570

Query: 75  GRSHSAAWTA 84
           G ++SAA T+
Sbjct: 571 GSTYSAAVTS 580



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G +IP    A     +  I+ G +  LA+S TG+V+ WG     +LG GN  +YR P
Sbjct: 3098 GSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSP 3157

Query: 59   QLVLA-LSNKNIRQVSAGRSHSAAWT 83
            QL+   L  K I +++ G  H  A T
Sbjct: 3158 QLIEGPLKKKRITEIAVGALHCLAVT 3183



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           + +    N HIVDI+VG  H LA+++  Q+F WG  SD Q    +  NY  EP  + A++
Sbjct: 715 KMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWG--SDVQKYALSSDNYNMEPTCISAIN 772

Query: 66  NKNIRQVSAGRSHSAAWTA 84
            + I  V+ G + +  WT+
Sbjct: 773 KEFIAGVACGPAQNFLWTS 791



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 5/88 (5%)

Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCG 469
           +ACG    H+  +  +G ++++G+GDYG+LG G +   KVP+ V  L  +  ++ +V CG
Sbjct: 620 VACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCG 679

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              +V +   G  V+ +G  +  +LG G
Sbjct: 680 SQFSVALGKDG-TVWTWGKSDGYRLGHG 706



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           Y   + CG + S  +  +G ++T+G  D  RLGHGT  + + P+ V  L   H+  ++ G
Sbjct: 672 YIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVG 731

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
            +H + + D  +      D +   L   N  ++PT
Sbjct: 732 PSHCLALTDNCQIFTWGSDVQKYALSSDNYNMEPT 766



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 41/75 (54%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            +S  + R I A     IV IS G+ H  A+++ G+++ WG     +LG G+  +  +P+L
Sbjct: 3895 LSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKL 3954

Query: 61   VLALSNKNIRQVSAG 75
            + AL +  +  V+ G
Sbjct: 3955 LEALKSYKVIDVACG 3969



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNH 472
            IA G  H   VT  G +Y++G+ D+G+ G+G T   K P+  +  L+ V +  ++CG +H
Sbjct: 3172 IAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICLGELDGVKISHIACGSSH 3231

Query: 473  TV 474
            ++
Sbjct: 3232 SI 3233



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 39/70 (55%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N +IV++  G++  +A+   G V+ WG +   +LG G   + R P++V  L N +I  ++
Sbjct: 670 NKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIA 729

Query: 74  AGRSHSAAWT 83
            G SH  A T
Sbjct: 730 VGPSHCLALT 739



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 35/67 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +    N  I  I+ G+ +  AV++ G+++ WG  S  +LG GN  +   P LV  LS  +
Sbjct: 557 VKELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSH 616

Query: 69  IRQVSAG 75
           +  V+ G
Sbjct: 617 VVDVACG 623



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 30/60 (50%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H    T  G ++T+G+ D G+LG+GT      P  V  L  V +  V CG  H+
Sbjct: 4072 VAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSAHS 4131



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 9/104 (8%)

Query: 7    RHIPAFKNIHIVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            + + A ++  ++DI+ G+     LA+++   V++WG+    +LG G       PQ + AL
Sbjct: 3052 KQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNIPQKIDAL 3111

Query: 65   SNKNIRQVSAGRSHSAA-------WTAPPLPPHTPGHTPSSSLR 101
              +++ +++ G   S A       WT      +  GH   S  R
Sbjct: 3112 CGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYR 3155



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 36/67 (53%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I A ++  IV+I+ G+ H  AV+  G+++ WG     +LG G+      P+ V AL +  
Sbjct: 3002 IEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYK 3061

Query: 69   IRQVSAG 75
            +  ++ G
Sbjct: 3062 VIDIACG 3068



 Score = 38.9 bits (89), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 4/70 (5%)

Query: 16  HIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS--NKNIRQ 71
           H+VD++ G+   H LA+   G V++WG+    +LG G     + P++V  L   NK I  
Sbjct: 616 HVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVN 675

Query: 72  VSAGRSHSAA 81
           V  G   S A
Sbjct: 676 VLCGSQFSVA 685


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 189/364 (51%), Gaps = 34/364 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I+ I+ G+ H +A ++ G+VF WG+N + QLG G     + P+LV AL  
Sbjct: 4073 RKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQG 4132

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+       T   T S      +P   P  Y  +++ P P++  R
Sbjct: 4133 KKITRVACGSAHTLAWS-------TMKATQSK-----MPATTPMEYDLVKDLPFPVLHNR 4180

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ F++L+   + + P+           P S      L P+    +      + V  
Sbjct: 4181 LVLLHHFAELLCPCLPMYPITG---------PVSL---SKLAPILVYSIKEATFRKVVQA 4228

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP + + R+  K  ++         +K +F Q+  ++  +    L  P R W
Sbjct: 4229 TMVRDRQHGPVIELNRIQVKRARSKGGLAGPDGIKSVFGQMVSKISLLTQDVLFFPHRIW 4288

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK +GE  DD GG + ++I EMC EL +G++PLL+ TPNG  D G NRD ++LNP +++
Sbjct: 4289 KVKFIGESVDDCGGGYSESIAEMCDELQNGSLPLLIPTPNGRDDNGTNRDCFLLNP-IAD 4347

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
            S   +  F+FLGIL G+AIRT  PL L L+  VWK +    +T  DL + D  Y   L  
Sbjct: 4348 SPLHMNMFRFLGILMGIAIRTGSPLSLNLAEPVWKQLAGISLTPADLTEIDRDYVPGLLC 4407

Query: 358  IRDI 361
            IRD+
Sbjct: 4408 IRDM 4411



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS G+LYT+G G YGRLGHG + +   P+ + AL    V  V+CG    
Sbjct: 3928 IACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDA 3987

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 3988 QTLCVTDDDN-VWSWGDGDYGKLGRGGS 4014



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 87/162 (53%), Gaps = 8/162 (4%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVPLTFA 404
            +Y++ L  ++ +H++G ++  F  ++  E     C EG +    +       +  P+ F 
Sbjct: 2815 VYSEVLSKLKPVHIAGGSKTLF--VVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFL 2872

Query: 405  NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            ++    + A+  G KH+  +T +G ++++G G+ G+LGHG +++   P  + +L    + 
Sbjct: 2873 SQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIR 2932

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++CG  H+  I   G+ +Y +G GEYG+LG G+T  +  P+
Sbjct: 2933 DIACGSGHSAAITSSGE-LYTWGLGEYGRLGHGDTATQSKPK 2973



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            IACG  HSA +TS+G LYT+G G+YGRLGHG T     P+ V +L    V  ++CG    
Sbjct: 2934 IACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDA 2993

Query: 474  VCIADKGKA-VYAFGDGEYGKLGLGNTGLKPTP 505
              +A      VY++GDG++GKLG G +    TP
Sbjct: 2994 QTMALTADGLVYSWGDGDFGKLGRGGSDGCYTP 3026



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 5/97 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGLN- 471
           IACG  +SA ++SNG LYT+G G+YG+LGHG +  +  +P  V ALN   V  V+CG   
Sbjct: 559 IACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGR 618

Query: 472 --HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              T+C+   G  V+++GDG +GKLG G      TP+
Sbjct: 619 DPQTLCVTASG-IVFSWGDGNHGKLGRGGCDGSKTPK 654



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 6/159 (3%)

Query: 352  AQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPLTFANRLQYY 410
             +SL A+R + L+G  +  F      + +  G    GR+    T    VP T    +Q+ 
Sbjct: 3811 CESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVP-TLLESIQHV 3869

Query: 411  ---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
               + A+  G KH   ++S G++Y++G GD G+LGHG  +++  P+ +  L    +  ++
Sbjct: 3870 FVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIA 3929

Query: 468  CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            CG +H+  I   G  +Y +G G YG+LG G++  + TP+
Sbjct: 3930 CGGHHSAAITSAG-WLYTWGKGRYGRLGHGDSEDQLTPK 3967



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  +P+   +        + CG + S  +T +G +YT+G GDY RLGHGT  + + P 
Sbjct: 4014 SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPR 4073

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V AL    + S++ G  H V   DKG+ V+ +GD + G+LG G T     P+
Sbjct: 4074 KVAALQGKKIISIATGSLHCVACTDKGE-VFTWGDNDEGQLGDGTTSALQRPR 4125



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 3/98 (3%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   I+ ++VG  H LAV++ GQV+AWG+N   Q G G  I  ++P LV  L +  
Sbjct: 3081 VEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDAR 3140

Query: 69   IRQVSAGRSHSAAWT---APPLPPHTPGHTPSSSLRLG 103
            + +VS G SHS AW     P +    P   P++   LG
Sbjct: 3141 VNRVSCGSSHSIAWVLTDQPAINNQEPVTFPTTKDPLG 3178



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 45/70 (64%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V +  G +H LA++  G+VF+WG   D +LG GN I+  +P+L+ +L +K IR ++ 
Sbjct: 2877 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIAC 2936

Query: 75   GRSHSAAWTA 84
            G  HSAA T+
Sbjct: 2937 GSGHSAAITS 2946



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P  V  L    +  V+ G  H 
Sbjct: 3040 IECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHC 3099

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3100 LAVTDIGQ-VYAWGDNDHGQQGNGTTIVNKKP 3130



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 1/80 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           H   +T +  +Y++GNG+ GRLGHG    +  P+ + AL + ++  ++CG  ++  ++  
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSN 572

Query: 480 GKAVYAFGDGEYGKLGLGNT 499
           G+ +Y +G G YGKLG GN+
Sbjct: 573 GE-LYTWGRGNYGKLGHGNS 591



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 4/94 (4%)

Query: 407  LQYYEAA-IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            LQ Y+   +ACG     +  VT +  ++++G+GDYG+LG G +   K+P ++ +L  + V
Sbjct: 3972 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4031

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              V CG   +V +   G A+Y +G G+Y +LG G
Sbjct: 4032 IKVECGSQFSVALTRSG-AIYTWGKGDYHRLGHG 4064



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFK--HSAVVTSNGYLYTFGNGDYGRLGHG 444
            GR+    T  QS P    + +      IACG +   +  +T++G +Y++G+GD+G+LG G
Sbjct: 2959 GRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG 3018

Query: 445  TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +     P  +  LN + V  + CG   ++ +   G+ V+ +G G+Y +LG GN
Sbjct: 3019 GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGE-VWTWGKGDYFRLGHGN 3071



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V ++ G +H LA+S+ G V++WG   D +LG GN+++Y  P+L+  L    I  ++ G  
Sbjct: 3874 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGH 3933

Query: 78   HSAAWTA 84
            HSAA T+
Sbjct: 3934 HSAAITS 3940



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 414 IACG---FKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           +ACG      +  VT++G ++++G+G++G+LG G     K P+ V  L  ++V  V CG 
Sbjct: 612 VACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQ 671

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +  +   G+ VY +G GE  KLG GN
Sbjct: 672 QFSAALTAYGE-VYTWGKGEDYKLGHGN 698



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 2/84 (2%)

Query: 3   GTSGRHIPAFKNIHIVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
           G+  + +  F    I  I+  ++  H LA++    V++WGN    +LG GN   Y EP+L
Sbjct: 488 GSETQRVYGFSEKPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKL 547

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           + AL  KNI  ++ G ++SAA ++
Sbjct: 548 IEALVEKNITFIACGSTYSAALSS 571



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT+  K P  V  L+   V  VSCG +H+
Sbjct: 3092 VAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHS 3151

Query: 474  V 474
            +
Sbjct: 3152 I 3152



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 3/111 (2%)

Query: 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           G   P      L    A + CG + SA +T+ G +YT+G G+  +LGHG   + + P+ +
Sbjct: 649 GSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKII 708

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL--GLGNTGLKPT 504
             L    ++ +  G  H + + +  + VY +G  ++G++   LG    +PT
Sbjct: 709 DILKTKKIKDLYIGHLHVLALTED-QLVYGWGRNDHGQIDPALGTIVPEPT 758



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    T  G ++T+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4085 SIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAH 4144

Query: 473  TV 474
            T+
Sbjct: 4145 TL 4146



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + K+  I DI+ G+ H  A++++G+++ WG     +LG G+     +P+LV +L  
Sbjct: 2921 RLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVG 2980

Query: 67   KNIRQVSAGR--SHSAAWTAPPL 87
            + + Q++ G   + + A TA  L
Sbjct: 2981 QRVIQIACGSRDAQTMALTADGL 3003



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 39/74 (52%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           +I++  +  G +   A++  G+V+ WG   D +LG GN+ + R P+++  L  K I+ + 
Sbjct: 661 DINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLY 720

Query: 74  AGRSHSAAWTAPPL 87
            G  H  A T   L
Sbjct: 721 IGHLHVLALTEDQL 734



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 37/75 (49%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I     + +V I  G +  LA++  G+V+ WG     +LG GN  + R+P LV  L  K 
Sbjct: 3029 IDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK 3088

Query: 69   IRQVSAGRSHSAAWT 83
            I  V+ G  H  A T
Sbjct: 3089 IIHVAVGALHCLAVT 3103



 Score = 41.6 bits (96), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 34/67 (50%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I       IVDI+ G  H  A+++ G ++ WG     +LG G+  +   P+L+ AL +  
Sbjct: 3917 IEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYK 3976

Query: 69   IRQVSAG 75
            +  V+ G
Sbjct: 3977 VIDVACG 3983



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 34/74 (45%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   K   I D+ +G  HVLA++    V+ WG N   Q+         EP L    S KN
Sbjct: 708 IDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQIDPALGTIVPEPTLCPTFSGKN 767

Query: 69  IRQVSAGRSHSAAW 82
           +  ++ G + S AW
Sbjct: 768 VIGLACGPTQSFAW 781



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
             L V+ +G VF+WG+ +  +LG G     + P++V  L + N+ +V  G+  SAA TA
Sbjct: 621 QTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTA 679



 Score = 38.9 bits (89), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS--AG 75
            V I+ G++ +  VS  G+++A G  ++ +LGLG+  N  EP+ +  LS   I++V+  +G
Sbjct: 2826 VHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSG 2885

Query: 76   RSHSAAWT 83
              H+ A T
Sbjct: 2886 GKHALALT 2893


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 187/365 (51%), Gaps = 34/365 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I+ I+ G+ H +A ++ G+VF WG+N + QLG G     + P+LV AL  
Sbjct: 4581 RKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQG 4640

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+       T   T S      +P   P  Y  +++ P P++  R
Sbjct: 4641 KKITRVACGSAHTLAWS-------TMKATQSR-----MPATTPMEYDLVKDLPFPVLHNR 4688

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ F++L+   + + P+           P S      L P+    +      + V  
Sbjct: 4689 LVLLHHFAELLCPCLPMFPITG---------PVSL---SKLAPMLVYSIKEATFRKVVQA 4736

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP + + R+  K  ++         +K +F Q+  ++  +    L  P R W
Sbjct: 4737 TMVRDRQHGPVIELNRIQVKRARSKAGLAGPDGIKSVFGQMVSKMSLLTQDVLFFPHRVW 4796

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK +GE  DD GG + ++I E+C EL +G++PLL+ TPNG  D G NRD ++LNP +  
Sbjct: 4797 KVKFIGESVDDCGGGYSESIAEICDELQNGSLPLLIPTPNGRDDNGTNRDCFLLNPMVDS 4856

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
             L   M F+FLGIL G+AIRT  PL L L+  VWK +    +T  DL + D  Y   L  
Sbjct: 4857 PLHMNM-FRFLGILMGIAIRTGSPLSLNLAEPVWKQLAGISLTPADLTEVDRDYVPGLLC 4915

Query: 358  IRDIH 362
            IRD+ 
Sbjct: 4916 IRDME 4920



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--N 471
           IACG  +SAV++SNG LYT+G G+YGRLGHG + N  +P  V ALN   V  V+CG   +
Sbjct: 562 IACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDS 621

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+C+   G  V+++GDG YGKLG G      TP+
Sbjct: 622 QTLCVTASG-IVFSWGDGNYGKLGRGGCDGSKTPK 655



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS G+LYT+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 4436 IACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDA 4495

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4496 QTLCVTDDDN-VWSWGDGDYGKLGRGGS 4522



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 3/94 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG T     P+ V +L    V  V+CG    
Sbjct: 3403 IACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDA 3462

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             T+ +   G +VY++GDG++GKLG G +    TP
Sbjct: 3463 QTMALTADG-SVYSWGDGDFGKLGRGGSDGCYTP 3495



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 88/164 (53%), Gaps = 12/164 (7%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVP--LT 402
            +Y++ L  ++ IH++G ++  F  ++  E     C EG +  GR+          P  + 
Sbjct: 3284 VYSEVLSKLKPIHIAGGSKTLF--VVSQEGKLYACGEGTN--GRLGLGDDSNVCEPKLIP 3339

Query: 403  FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
            F ++    + A+  G KH+  +T +G ++++G G+ G+LGHG +++   P  + +L    
Sbjct: 3340 FLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKR 3399

Query: 463  VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +  ++CG  H+  I   G+ +Y +G GEYG+LG G+T  +  P+
Sbjct: 3400 IRDIACGSGHSAAITSSGE-LYTWGLGEYGRLGHGDTATQMKPK 3442



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  +P+   +        + CG + S  +T +G +YT+G GDY RLGHGT  + + P 
Sbjct: 4522 SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPR 4581

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V AL    + S++ G  H V   DKG+ V+ +GD + G+LG G T     P+
Sbjct: 4582 KVAALQGKKIISIATGSLHCVACTDKGE-VFTWGDNDEGQLGDGTTSALQRPR 4633



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 6/161 (3%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPLTFANRLQ 408
            +  +SL A+R + L+G  +         + +  G    GR+    T    VP T    +Q
Sbjct: 4317 VLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVP-TLLESIQ 4375

Query: 409  YY---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
            +    + A+  G KH   ++S G++Y++G GD G+LGHG  + +  P+ +  L    +  
Sbjct: 4376 HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVD 4435

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            ++CG +H+  I   G  +Y +G G YG+LG G++  + TP+
Sbjct: 4436 IACGGHHSAAITSAG-WLYTWGKGRYGRLGHGDSEDQLTPK 4475



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 47/80 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   +V ++VG  H LAV++TGQV+AWG+N   Q G G+ I  ++P LV  L +  
Sbjct: 3550 VEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDAR 3609

Query: 69   IRQVSAGRSHSAAWTAPPLP 88
            + +VS G SHS AW     P
Sbjct: 3610 VNRVSCGSSHSIAWVLTDQP 3629



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P  V  L    V  V+ G  H 
Sbjct: 3509 IECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHC 3568

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G+T +   P
Sbjct: 3569 LAVTDTGQ-VYAWGDNDHGQQGNGSTIVNKKP 3599



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 2/78 (2%)

Query: 9    IPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            IP      I  ++V  G +H LA++  G++F+WG   D +LG GN ++  +P+L+ +L +
Sbjct: 3338 IPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKS 3397

Query: 67   KNIRQVSAGRSHSAAWTA 84
            K IR ++ G  HSAA T+
Sbjct: 3398 KRIRDIACGSGHSAAITS 3415



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 1/80 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           H   +T +  +Y++GNGD GRLGHG  + +  P+ V AL   ++  ++CG  ++  ++  
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSN 575

Query: 480 GKAVYAFGDGEYGKLGLGNT 499
           G+ +Y +G G YG+LG GN+
Sbjct: 576 GE-LYTWGRGNYGRLGHGNS 594



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 4/94 (4%)

Query: 407  LQYYEAA-IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            LQ Y+   +ACG     +  VT +  ++++G+GDYG+LG G +   K+P ++ +L  + V
Sbjct: 4480 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4539

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              V CG   +V +   G A+Y +G G+Y +LG G
Sbjct: 4540 IKVECGSQFSVALTRSG-AIYTWGKGDYHRLGHG 4572



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T++G +Y++G+GD+G+LG G +     P  +  LN + V  + CG  
Sbjct: 3455 VACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3514

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G+ V+ +G G+Y +LG GN
Sbjct: 3515 FSLALTKYGE-VWTWGKGDYFRLGHGN 3540



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 41/67 (61%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V ++ G +H LA+S+ G V++WG   D +LG GN++ Y  P+L+  L    I  ++ G  
Sbjct: 4382 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGH 4441

Query: 78   HSAAWTA 84
            HSAA T+
Sbjct: 4442 HSAAITS 4448



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSA--VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG   S    VT++G ++++G+G+YG+LG G     K P+ V  L  ++V  V CG  
Sbjct: 614 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQ 673

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +  +   G+ VY +G GE  +LG GN
Sbjct: 674 FSAALTAYGE-VYTWGKGEGYRLGHGN 699



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 3/111 (2%)

Query: 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           G   P      L    A + CG + SA +T+ G +YT+G G+  RLGHG   + + P+ +
Sbjct: 650 GSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVI 709

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL--GLGNTGLKPT 504
             L    V+ +  G  H + + +  + VY +G  +YG++   LG    +PT
Sbjct: 710 EVLXTKKVKELCVGNFHVLALTED-QLVYGWGRNDYGQIDPALGTVVPEPT 759



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 39/59 (66%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
           H LA++    V++WGN    +LG G+++ Y EP+LV AL +KNI  ++ G ++SA  ++
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSS 574



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+G+T+  K P  V  L+   V  VSCG +H+
Sbjct: 3561 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHS 3620

Query: 474  V 474
            +
Sbjct: 3621 I 3621



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    T  G ++T+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4593 SIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAH 4652

Query: 473  TV 474
            T+
Sbjct: 4653 TL 4654



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 41/69 (59%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + K+  I DI+ G+ H  A++++G+++ WG     +LG G+     +P+LV +L  
Sbjct: 3390 RLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVG 3449

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3450 QRVIQVACG 3458



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I     + +V I  G +  LA++  G+V+ WG     +LG GN  + R+P LV  L  K 
Sbjct: 3498 IDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK 3557

Query: 69   IRQVSAGRSHSAAWT 83
            +  V+ G  H  A T
Sbjct: 3558 VVHVAVGALHCLAVT 3572



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 39/74 (52%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           +I++  +  G +   A++  G+V+ WG     +LG GN+ + R P+++  L  K ++++ 
Sbjct: 662 DINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELC 721

Query: 74  AGRSHSAAWTAPPL 87
            G  H  A T   L
Sbjct: 722 VGNFHVLALTEDQL 735



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 34/67 (50%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I       IVDI+ G  H  A+++ G ++ WG     +LG G+  +   P+LV AL +  
Sbjct: 4425 IEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYK 4484

Query: 69   IRQVSAG 75
            +  V+ G
Sbjct: 4485 VIDVACG 4491



 Score = 42.0 bits (97), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   K IHI     G++ +  VS  G+++A G  ++ +LGLG+  N  EP+L+  LS   
Sbjct: 3289 LSKLKPIHIAG---GSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYM 3345

Query: 69   IRQ--VSAGRSHSAAWT 83
            I++  V +G  H+ A T
Sbjct: 3346 IKKMAVHSGGKHALALT 3362



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 34/74 (45%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I       + ++ VG  HVLA++    V+ WG N   Q+         EP L   LS KN
Sbjct: 709 IEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKN 768

Query: 69  IRQVSAGRSHSAAW 82
           I  ++ G + S AW
Sbjct: 769 IIGLACGLTQSFAW 782



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A     +V ++ G+     L V+ +G VF+WG+ +  +LG G     + P++V  L +
Sbjct: 603 VTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLD 662

Query: 67  KNIRQVSAGRSHSAAWTA 84
            N+ +V  G   SAA TA
Sbjct: 663 INVAKVYCGGQFSAALTA 680



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 37/71 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A  + +I  I+ G+ +   +S+ G+++ WG  +  +LG GN  N   P LV AL+   
Sbjct: 551 VEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHM 610

Query: 69  IRQVSAGRSHS 79
           +  V+ G   S
Sbjct: 611 VVHVACGSGDS 621


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 187/365 (51%), Gaps = 34/365 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I+ I+ G+ H +A ++ G+VF WG+N + QLG G     + P+LV AL  
Sbjct: 4548 RKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQG 4607

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+       T   T S      +P   P  Y  +++ P P++  R
Sbjct: 4608 KKITRVACGSAHTLAWS-------TMKATQSR-----MPATTPMEYDLVKDLPFPVLHNR 4655

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ F++L+   + + P+           P S      L P+    +      + V  
Sbjct: 4656 LVLLHHFAELLCPCLPMFPITG---------PVSL---SKLAPMLVYSIKEATFRKVVQA 4703

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP + + R+  K  ++         +K +F Q+  ++  +    L  P R W
Sbjct: 4704 TMVRDRQHGPVIELNRIQVKRARSKAGLAGPDGIKSVFGQMVSKMSLLTQDVLFFPHRVW 4763

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK +GE  DD GG + ++I E+C EL +G++PLL+ TPNG  D G NRD ++LNP +  
Sbjct: 4764 KVKFIGESVDDCGGGYSESIAEICDELQNGSLPLLIPTPNGRDDNGTNRDCFLLNPIVDS 4823

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
             L   M F+FLGIL G+AIRT  PL L L+  VWK +    +T  DL + D  Y   L  
Sbjct: 4824 PLHMNM-FRFLGILMGIAIRTGSPLSLNLAEPVWKQLAGISLTPADLTEVDRDYVPGLLC 4882

Query: 358  IRDIH 362
            IRD+ 
Sbjct: 4883 IRDME 4887



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--N 471
           IACG  +SAV++SNG LYT+G G+YGRLGHG + N  +P  V ALN   V  V+CG   +
Sbjct: 554 IACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDS 613

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+C+   G  V+++GDG YGKLG G      TP+
Sbjct: 614 QTLCVTASG-IVFSWGDGNYGKLGRGGCDGSKTPK 647



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS G+LYT+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 4403 IACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDA 4462

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4463 QTLCVTDDDN-VWSWGDGDYGKLGRGGS 4489



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 3/94 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG T     P+ V +L    V  V+CG    
Sbjct: 3398 IACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDA 3457

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             T+ +   G +VY++GDG++GKLG G +    TP
Sbjct: 3458 QTMALTADG-SVYSWGDGDFGKLGRGGSDGCYTP 3490



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 88/164 (53%), Gaps = 12/164 (7%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVP--LT 402
            +Y++ L  ++ IH++G ++  F  ++  E     C EG +  GR+          P  + 
Sbjct: 3279 VYSEVLSKLKPIHIAGGSKTLF--VVSQEGKLYACGEGTN--GRLGLGDDSNVCEPKLIP 3334

Query: 403  FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
            F ++    + A+  G KH+  +T +G ++++G G+ G+LGHG +++   P  + +L    
Sbjct: 3335 FLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKR 3394

Query: 463  VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +  ++CG  H+  I   G+ +Y +G GEYG+LG G+T  +  P+
Sbjct: 3395 IRDIACGSGHSAAITSSGE-LYTWGLGEYGRLGHGDTATQMKPK 3437



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  +P+   +        + CG + S  +T +G +YT+G GDY RLGHGT  + + P 
Sbjct: 4489 SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPR 4548

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V AL    + S++ G  H V   DKG+ V+ +GD + G+LG G T     P+
Sbjct: 4549 KVAALQGKKIISIATGSLHCVACTDKGE-VFTWGDNDEGQLGDGTTSALQRPR 4600



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 6/161 (3%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPLTFANRLQ 408
            +  +SL A+R + L+G  +         + +  G    GR+    T    VP T    +Q
Sbjct: 4284 VLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVP-TLLESIQ 4342

Query: 409  YY---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
            +    + A+  G KH   ++S G++Y++G GD G+LGHG  + +  P+ +  L    +  
Sbjct: 4343 HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVD 4402

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            ++CG +H+  I   G  +Y +G G YG+LG G++  + TP+
Sbjct: 4403 IACGGHHSAAITSAG-WLYTWGKGRYGRLGHGDSEDQLTPK 4442



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 1/88 (1%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   +V ++VG  H LAV++TGQV+AWG+N   Q G G+ I  ++P LV  L +  
Sbjct: 3545 VEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDAR 3604

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTP 96
            + +VS G SHS AW      P T  H P
Sbjct: 3605 VNRVSCGSSHSIAWVLTD-QPATNNHEP 3631



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P  V  L    V  V+ G  H 
Sbjct: 3504 IECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHC 3563

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G+T +   P
Sbjct: 3564 LAVTDTGQ-VYAWGDNDHGQQGNGSTIVNKKP 3594



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 2/78 (2%)

Query: 9    IPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            IP      I  ++V  G +H LA++  G++F+WG   D +LG GN ++  +P+L+ +L +
Sbjct: 3333 IPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKS 3392

Query: 67   KNIRQVSAGRSHSAAWTA 84
            K IR ++ G  HSAA T+
Sbjct: 3393 KRIRDIACGSGHSAAITS 3410



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 1/80 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           H   +T +  +Y++GNGD GRLGHG  + +  P+ V AL   ++  ++CG  ++  ++  
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSN 567

Query: 480 GKAVYAFGDGEYGKLGLGNT 499
           G+ +Y +G G YG+LG GN+
Sbjct: 568 GE-LYTWGRGNYGRLGHGNS 586



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 4/94 (4%)

Query: 407  LQYYEAA-IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            LQ Y+   +ACG     +  VT +  ++++G+GDYG+LG G +   K+P ++ +L  + V
Sbjct: 4447 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4506

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              V CG   +V +   G A+Y +G G+Y +LG G
Sbjct: 4507 IKVECGSQFSVALTRSG-AIYTWGKGDYHRLGHG 4539



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T++G +Y++G+GD+G+LG G +     P  +  LN + V  + CG  
Sbjct: 3450 VACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3509

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G+ V+ +G G+Y +LG GN
Sbjct: 3510 FSLALTKYGE-VWTWGKGDYFRLGHGN 3535



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 41/67 (61%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V ++ G +H LA+S+ G V++WG   D +LG GN++ Y  P+L+  L    I  ++ G  
Sbjct: 4349 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGH 4408

Query: 78   HSAAWTA 84
            HSAA T+
Sbjct: 4409 HSAAITS 4415



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSA--VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG   S    VT++G ++++G+G+YG+LG G     K P+ V  L  ++V  V CG  
Sbjct: 606 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQ 665

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +  +   G+ VY +G GE  +LG GN
Sbjct: 666 FSAALTAYGE-VYTWGKGEGYRLGHGN 691



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 3/111 (2%)

Query: 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           G   P      L    A + CG + SA +T+ G +YT+G G+  RLGHG   + + P+ +
Sbjct: 642 GSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVI 701

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL--GLGNTGLKPT 504
             L    V+ +  G  H + + +  + VY +G  +YG++   LG    +PT
Sbjct: 702 EVLKPKKVKELCVGNFHVLALTED-QLVYGWGRNDYGQIDPALGTIVPEPT 751



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 39/59 (66%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
           H LA++    V++WGN    +LG G+++ Y EP+LV AL +KNI  ++ G ++SA  ++
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSS 566



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+G+T+  K P  V  L+   V  VSCG +H+
Sbjct: 3556 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHS 3615

Query: 474  V 474
            +
Sbjct: 3616 I 3616



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    T  G ++T+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4560 SIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAH 4619

Query: 473  TV 474
            T+
Sbjct: 4620 TL 4621



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 41/69 (59%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + K+  I DI+ G+ H  A++++G+++ WG     +LG G+     +P+LV +L  
Sbjct: 3385 RLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVG 3444

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3445 QRVIQVACG 3453



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I     + +V I  G +  LA++  G+V+ WG     +LG GN  + R+P LV  L  K 
Sbjct: 3493 IDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK 3552

Query: 69   IRQVSAGRSHSAAWT 83
            +  V+ G  H  A T
Sbjct: 3553 VVHVAVGALHCLAVT 3567



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 39/74 (52%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           +I++  +  G +   A++  G+V+ WG     +LG GN+ + R P+++  L  K ++++ 
Sbjct: 654 DINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELC 713

Query: 74  AGRSHSAAWTAPPL 87
            G  H  A T   L
Sbjct: 714 VGNFHVLALTEDQL 727



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 5/77 (6%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   K IHI     G++ +  VS  G+++A G  ++ +LGLG+  N  EP+L+  LS   
Sbjct: 3284 LSKLKPIHIAG---GSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYM 3340

Query: 69   IRQVS--AGRSHSAAWT 83
            I++V+  +G  H+ A T
Sbjct: 3341 IKKVAVHSGGKHALALT 3357



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 34/67 (50%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I       IVDI+ G  H  A+++ G ++ WG     +LG G+  +   P+LV AL +  
Sbjct: 4392 IEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYK 4451

Query: 69   IRQVSAG 75
            +  V+ G
Sbjct: 4452 VIDVACG 4458



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 35/74 (47%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   K   + ++ VG  HVLA++    V+ WG N   Q+         EP L   LS KN
Sbjct: 701 IEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPALGTIVPEPTLCPTLSGKN 760

Query: 69  IRQVSAGRSHSAAW 82
           I  ++ G + S AW
Sbjct: 761 IIGLACGLTQSFAW 774



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 23  GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAW 82
           G    L V+ +G VF+WG+ +  +LG G     + P++V  L + N+ +V  G   SAA 
Sbjct: 611 GDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAAL 670

Query: 83  TA 84
           TA
Sbjct: 671 TA 672



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 37/71 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A  + +I  I+ G+ +   +S+ G+++ WG  +  +LG GN  N   P LV AL+   
Sbjct: 543 VEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHM 602

Query: 69  IRQVSAGRSHS 79
           +  V+ G   S
Sbjct: 603 VVYVACGSGDS 613


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 215/423 (50%), Gaps = 43/423 (10%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S+ G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4488 KKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQG 4547

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K+I +V+ G +H+ A +   L           S RL    + P  Y  +++     + AR
Sbjct: 4548 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDLAPEALHAR 4596

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ FS+L+   + +LP+               L   +L+ +    +      + +  
Sbjct: 4597 LILLHHFSELLCPCLAMLPIAGD------------LSLGALKDVLVYNIKEAAFRKVIQT 4644

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  K  GP + + R+  K  ++          +K +F Q+ +++  +    L LP R 
Sbjct: 4645 TMVRDKQHGPVIELNRIQVKRSRSRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHRV 4704

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G+VPLL+ TPNG  + G NRD ++L+P L+
Sbjct: 4705 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLISTPNGRGEAGANRDCFLLDPTLT 4764

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              LQ  M F+FLG+L G+A+RT  PL L L+  VW+ +  EP+  TDL + D  Y   L 
Sbjct: 4765 SVLQMNM-FRFLGVLMGIAVRTGSPLSLNLAEPVWRQLTGEPLRPTDLTEVDRDYVAGLL 4823

Query: 357  AIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIAC 416
             IR++      +A     + L  F  +S  G   P+ T  +   ++  NR +Y   A+  
Sbjct: 4824 CIRNMD----DDAKLFNTLELP-FSTSSARGHEVPLST--RYTHISPRNRAEYVRLAL-- 4874

Query: 417  GFK 419
            GF+
Sbjct: 4875 GFR 4877



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA ++S G LYT+G G+YGRLGHG       P+ V AL+   V  V+CG    
Sbjct: 3189 IACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDA 3248

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + + G AV+++GDG++GKLG G +    TP 
Sbjct: 3249 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSATPH 3282



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 5/95 (5%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN- 471
           ++ CG  +SA +T  G LYT+G G YGRLGHG + +  +P  V+AL    V  V+ G   
Sbjct: 672 SVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGD 731

Query: 472 -HTVCIADKGKAVYAFGDGEYGKLGLG--NTGLKP 503
            HT+C+  +G  VYA+GDG+YGKLG G  N+ L+P
Sbjct: 732 AHTLCLT-RGGLVYAWGDGDYGKLGNGSCNSSLQP 765



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 11/188 (5%)

Query: 324  LPLSPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANF---PEIIPLEC 379
            LP + +VW L  +E +      +     ++Q++  +R IH++G +++ F    +     C
Sbjct: 3043 LPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYAC 3102

Query: 380  FEGASWTGRITPIVTGGQSVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGNGD 437
             EG +  GR+   VT    +P       QY   + A+  G KH+  +T +G ++++G G+
Sbjct: 3103 GEGTN--GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGE 3160

Query: 438  YGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
             G+LGHG       P  V AL    +  ++CG +H+  I+ +G+ +Y +G GEYG+LG G
Sbjct: 3161 DGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGE-LYTWGLGEYGRLGHG 3219

Query: 498  N--TGLKP 503
            +  T LKP
Sbjct: 3220 DNATQLKP 3227



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 3/90 (3%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            A IACG  HSA +T++G++ T+G G YGRLGHG + +   P+ V AL       ++CG  
Sbjct: 4341 ADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSG 4400

Query: 472  --HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
               T+CI D    V+++GDG+YGKLG G +
Sbjct: 4401 DAQTLCITDDDN-VWSWGDGDYGKLGRGGS 4429



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GD+ RLGHG+  + + P++V AL    + S++ G  H 
Sbjct: 4449 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4508

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
            V  +D G+ VY +GD + G+LG G 
Sbjct: 4509 VACSDAGE-VYTWGDNDEGQLGDGT 4532



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P+ +  L    V  V+ G  H 
Sbjct: 3295 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHC 3354

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 3355 LAVTDAGQ-VYAWGDNDHGQQGSGNTFVNKKP 3385



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 1/89 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   +T++G +Y +G G+ G+LGHG  M++  P+ +  LN + V  ++CG 
Sbjct: 4288 KVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGS 4347

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             H+  I   G  V  +G G YG+LG G++
Sbjct: 4348 AHSAAITASGH-VLTWGKGRYGRLGHGDS 4375



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV++ GQV+AWG+N   Q G GN    ++P LV+ L    
Sbjct: 3336 IAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF 3395

Query: 69   IRQVSAGRSHSAAWTAP 85
            + +V+ G SHS AW  P
Sbjct: 3396 VNRVACGSSHSMAWGLP 3412



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)

Query: 373 EIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYT 432
           +++ L C EG  +   I    T  Q +         +   A  C  +H   V SN   Y+
Sbjct: 581 DMVVLLCQEGKLYNWPIAKPETEPQLLDFAEIANETFVSIAAHCEGRHFLAVDSNHNAYS 640

Query: 433 FGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYG 492
           +G GD  RLGHG     ++P ++ +L +  V+SV CG +++  I  +G  +Y +G G YG
Sbjct: 641 WGVGDSRRLGHGDCHARELPTKIESLVR-RVQSVYCGCSYSAAITLRGN-LYTWGRGTYG 698

Query: 493 KLGLGNTGLKPTP 505
           +LG GN+  +  P
Sbjct: 699 RLGHGNSDDQCMP 711



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 42/67 (62%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +  V +  G +H LA++  G+VF+WG   D +LG GN+    +P+LV AL  K IR ++ 
Sbjct: 3132 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIAC 3191

Query: 75   GRSHSAA 81
            G SHSAA
Sbjct: 3192 GSSHSAA 3198



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 46/70 (65%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +  V ++ G +H LA++  G+V+AWG   D +LG GN+++Y  P+L+  L+  ++  ++ 
Sbjct: 4286 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIAC 4345

Query: 75   GRSHSAAWTA 84
            G +HSAA TA
Sbjct: 4346 GSAHSAAITA 4355



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 407  LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            L Y    IACG     +  +T +  ++++G+GDYG+LG G +   K+P ++ +L  + V 
Sbjct: 4388 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVI 4447

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             V CG   +V +   G AVY +G G++ +LG G+
Sbjct: 4448 KVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGS 4480



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC--GLN 471
            IA G K   VV+ +G +Y  G G  GRLG G T N  +P ++  L++  V+ V+   G  
Sbjct: 3083 IAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3142

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H + +   GK V+++G+GE GKLG GN      P+
Sbjct: 3143 HALALTLDGK-VFSWGEGEDGKLGHGNRSTLDKPR 3176



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G ++++G+GD+G+LG G +     P  +  L+ + V  + CG  
Sbjct: 3241 VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQ 3300

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 3301 FSLALTRAGE-VWTWGKGDYYRLGHGGDQHVRKPQ 3334



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G +YT+G+ D G+LG GT    + P  V AL   H+  V+CG  H
Sbjct: 4500 SIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 4559

Query: 473  TVCIA 477
            T+ ++
Sbjct: 4560 TLALS 4564



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 39/69 (56%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I DI+ G+ H  A+S+ G+++ WG     +LG G+     +P+LV AL  
Sbjct: 3176 RLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALHG 3235

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3236 RRVIQVACG 3244



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G G T   K P  V+ L+ V V  V+CG +H+
Sbjct: 3347 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 3406

Query: 474  V 474
            +
Sbjct: 3407 M 3407



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 36/76 (47%)

Query: 8    HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
             I     I ++ I  G +  LA++  G+V+ WG     +LG G   + R+PQ +  L  +
Sbjct: 3283 EIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGR 3342

Query: 68   NIRQVSAGRSHSAAWT 83
             +  V+ G  H  A T
Sbjct: 3343 RVIHVAVGALHCLAVT 3358



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 27/41 (65%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
           R I + ++  IV ++VG  H LA+S+ G++F WG N + Q+
Sbjct: 818 RLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQI 858



 Score = 42.0 bits (97), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           Q  + A+  G  H+  +T  G +Y +G+GDYG+LG+G+  +   P  +  L +  V+ V 
Sbjct: 721 QVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPR--VQRVF 778

Query: 468 CGLNHTVCIADKGKAVYAFG 487
            G   ++ +  +G+ +Y++G
Sbjct: 779 AGSQFSLALTCEGQ-LYSWG 797



 Score = 38.5 bits (88), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A K+  ++D+++G+   H L ++  G V+AWG+    +LG G+  +  +P L+  L  
Sbjct: 714 VMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECL-- 771

Query: 67  KNIRQVSAGRSHSAAWTA 84
             +++V AG   S A T 
Sbjct: 772 PRVQRVFAGSQFSLALTC 789


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 186/365 (50%), Gaps = 36/365 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I+ I+ G+ H +A S+ G+VF WG+N + QLG G       P+LV AL  
Sbjct: 4232 RKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQG 4291

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+       T   T S      +P   P  Y  +++    ++R R
Sbjct: 4292 KKITRVACGSAHTLAWS-------TAKATQSR-----MPASTPMEYDLVKDLSYSVLRNR 4339

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+ F++L+   + + P+ G+V                 L P+    +      + + 
Sbjct: 4340 LVLLHHFAELLCPALAMFPITGHVGL-------------SKLAPMLVYSIKEATFRKVIQ 4386

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP + + R+  K  +          +K +F Q+  ++  +    L LP R 
Sbjct: 4387 ATMVRDRQHGPVIELNRIQVKRARAKGGLAGPDGIKSVFGQMVSKMSLLTQDVLFLPHRV 4446

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G +PL + TPNG  D G NRD ++LNP ++
Sbjct: 4447 WKVKFVGESVDDCGGGYSESIAEMCDELQNGCLPLFIPTPNGREDNGTNRDCFLLNP-MA 4505

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
            +S   +   +FLGIL G+AIRT  PL L L+  VWK +   P+T  DL + D  Y   L 
Sbjct: 4506 DSQLHMNMLQFLGILMGIAIRTGSPLSLNLAEPVWKQLAGIPLTPADLTEVDRDYVPGLL 4565

Query: 357  AIRDI 361
             IRD+
Sbjct: 4566 CIRDM 4570



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS G+LYT+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 4087 IACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDA 4146

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4147 QTLCVTDDDN-VWSWGDGDYGKLGRGGS 4173



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 87/162 (53%), Gaps = 8/162 (4%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVPLTFA 404
            +Y++ L  ++ IH++G ++  F  I+  E     C EG +    +       +  P+ F 
Sbjct: 2986 VYSEVLSKLKPIHIAGGSKTLF--IVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFL 3043

Query: 405  NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            ++    + A+  G KH+  +T +G ++++G G+ G+LGHG  M+   P+ +  L    + 
Sbjct: 3044 SQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR 3103

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++CG  H+  IA  G+ +Y +G GEYG+LG G+T  +  P+
Sbjct: 3104 DIACGSGHSAAIASNGE-LYTWGLGEYGRLGHGDTVTQARPK 3144



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--N 471
           IACG  +SA ++ +G LYT+G G+YGRLGHG   +  +P  V  L    V  V+CG   +
Sbjct: 566 IACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDS 625

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+C+   G  V+++GDG+YGKLG G T    TP+
Sbjct: 626 QTLCVTASG-IVFSWGDGDYGKLGRGGTDGSKTPK 659



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 3/94 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA + SNG LYT+G G+YGRLGHG T+    P+ V  L    V  V+CG    
Sbjct: 3105 IACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDA 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             T+ +   G  VY++GDG++GKLG G +    TP
Sbjct: 3165 QTMALTTDG-CVYSWGDGDFGKLGRGGSDGCYTP 3197



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 8/160 (5%)

Query: 352  AQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL-TFANRLQY 409
             +SL A+R I L+G  +  F      + +  G    GR+   + G  SV + T    +Q+
Sbjct: 3970 CESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLG--IGGTDSVMIPTLLESIQH 4027

Query: 410  Y---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
                + A++ G KH   ++S G++Y++G GD G+LGHG  M++  P+ +  L  V +  +
Sbjct: 4028 VFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDI 4087

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +CG +H+  I   G  +Y +G G YG+LG G++  +  P+
Sbjct: 4088 ACGGHHSAAITSAG-WLYTWGKGRYGRLGHGDSDDQLRPK 4126



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VPL   +        + CG + S  +T +G +YT+G GDY RLGHGT  + + P 
Sbjct: 4173 SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPR 4232

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V AL    + S++ G  H V  +DKG+ V+ +GD + G+LG G T     P+
Sbjct: 4233 KVAALQGKKIISIATGSLHCVACSDKGE-VFTWGDNDEGQLGDGTTSALHRPR 4284



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 63/96 (65%), Gaps = 2/96 (2%)

Query: 403 FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           F+++L    A+ + G KH   +T +G +Y++GNGD GRLGHG T+++  P+ + AL + +
Sbjct: 504 FSDKLVTMIASHSDG-KHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKN 562

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           +  ++CG  ++  ++  G+ +Y +G G YG+LG GN
Sbjct: 563 IVFIACGSTYSAALSVSGE-LYTWGRGNYGRLGHGN 597



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 45/80 (56%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L +  
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDAR 3311

Query: 69   IRQVSAGRSHSAAWTAPPLP 88
            + +VS G SHS AW     P
Sbjct: 3312 VNRVSCGSSHSIAWVLVDQP 3331



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T  G ++T+G GDY RLGHG   + + P  V  L    +  V+ G  H 
Sbjct: 3211 VECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHC 3270

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3271 LAVTDTGQ-VYAWGDNDHGQQGNGTTSVNRKP 3301



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V +  G +H LA++  G+VF+WG   D +LG GN ++  +P+L+  L +K IR ++ 
Sbjct: 3048 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIAC 3107

Query: 75   GRSHSAA 81
            G  HSAA
Sbjct: 3108 GSGHSAA 3114



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T G   P      L      + CG + SA +T++G +YT+G GD  RLGHG+  + + P+
Sbjct: 652 TDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPK 711

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG--LGNTGLKPT 504
            + +L    ++ +S G  H + + +  + VY +G  +YG++   LG+   +PT
Sbjct: 712 IIESLRDKKIKDLSVGATHILVLTED-QFVYGWGRNDYGQIDPTLGSVISEPT 763



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 4/94 (4%)

Query: 407  LQYYEAA-IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            LQ Y+   +ACG     +  VT +  ++++G+GDYG+LG G +   KVP ++ +L  + V
Sbjct: 4131 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGV 4190

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              V CG   +V +   G AVY +G G+Y +LG G
Sbjct: 4191 IKVECGSQFSVALTRSG-AVYTWGKGDYHRLGHG 4223



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFK--HSAVVTSNGYLYTFGNGDYGRLGHG 444
            GR+    T  Q+ P      + +    +ACG +   +  +T++G +Y++G+GD+G+LG G
Sbjct: 3130 GRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRG 3189

Query: 445  TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +     P  V  LN + V  V CG   ++ +   G+ V+ +G G+Y +LG GN
Sbjct: 3190 GSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGE-VWTWGKGDYFRLGHGN 3242



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V +S G +H LA+S+ G V++WG   D +LG GN+++Y  P+L+  L    I  ++ 
Sbjct: 4030 IKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIAC 4089

Query: 75   GRSHSAAWTA 84
            G  HSAA T+
Sbjct: 4090 GGHHSAAITS 4099



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSA--VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG   S    VT++G ++++G+GDYG+LG G T   K P+ V  L  ++V  V CG  
Sbjct: 618 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQ 677

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +  +   G+ VY +G G+  +LG G+
Sbjct: 678 FSAALTAHGE-VYTWGKGDTYRLGHGS 703



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 39/57 (68%)

Query: 25  EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAA 81
           +H LA++  G V++WGN    +LG G+ ++Y EP+L+ AL  KNI  ++ G ++SAA
Sbjct: 519 KHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAA 575



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 3   GTSGRHIPA----FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
           GT G   P       +I++V +  G++   A++  G+V+ WG     +LG G++ + R P
Sbjct: 651 GTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYP 710

Query: 59  QLVLALSNKNIRQVSAGRSH 78
           +++ +L +K I+ +S G +H
Sbjct: 711 KIIESLRDKKIKDLSVGATH 730



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    V  VSCG +H+
Sbjct: 3263 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSHS 3322

Query: 474  V 474
            +
Sbjct: 3323 I 3323



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G + P        + +V +  G +  LA++  G+V+ WG     +LG GN  + R+P
Sbjct: 3190 GSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP 3249

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
             LV  L  K I  V+ G  H  A T
Sbjct: 3250 TLVEGLRGKKIVHVAVGALHCLAVT 3274



 Score = 45.8 bits (107), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G ++T+G+ D G+LG GTT     P  V AL    +  V+CG  H
Sbjct: 4244 SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAH 4303

Query: 473  TV 474
            T+
Sbjct: 4304 TL 4305



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 39/75 (52%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            MS    + I   K+  I DI+ G+ H  A+++ G+++ WG     +LG G+ +    P+L
Sbjct: 3086 MSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKL 3145

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3146 VQTLVGHRVVQVACG 3160



 Score = 45.1 bits (105), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG--LGNQINYREPQLVLALSN 66
           I + ++  I D+SVG  H+L ++    V+ WG N   Q+   LG+ I+  EP L   LS+
Sbjct: 713 IESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQIDPTLGSVIS--EPTLCPTLSS 770

Query: 67  KNIRQVSAGRSHSAAW 82
           K +  +++G + S AW
Sbjct: 771 KTVIGLASGPTQSFAW 786



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 38/75 (50%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            MS    + I     + I+DI+ G  H  A+++ G ++ WG     +LG G+  +   P++
Sbjct: 4068 MSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKV 4127

Query: 61   VLALSNKNIRQVSAG 75
            V AL +  +  V+ G
Sbjct: 4128 VEALQDYKVIDVACG 4142



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K   +V ++ G+     L V+ +G VF+WG+    +LG G     + P++V  L +
Sbjct: 607 VTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLD 666

Query: 67  KNIRQVSAGRSHSAAWTA 84
            N+ +V  G   SAA TA
Sbjct: 667 INVVKVFCGSQFSAALTA 684



 Score = 38.9 bits (89), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 36/71 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A    +IV I+ G+ +  A+S +G+++ WG  +  +LG GN  +   P LV  L    
Sbjct: 555 IEALLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHT 614

Query: 69  IRQVSAGRSHS 79
           +  V+ G   S
Sbjct: 615 VVHVACGSGDS 625


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 186/364 (51%), Gaps = 34/364 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I+ I+ G+ H +A S+ G+VF WG+N + QLG G       P+LV AL  
Sbjct: 4283 RKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQG 4342

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+       T   T S      +P   P  Y  +++    ++R R
Sbjct: 4343 KKITRVACGSAHTLAWS-------TAKATQSR-----MPASTPMEYDLVKDLSYSVLRNR 4390

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ F++L+   + + P+             S +    L P+    +      + +  
Sbjct: 4391 LVLLHHFAELLCPALAMFPI------------TSHIGLSKLAPMLVYSIKEATFRKVIQA 4438

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP + + R+  K  +          +K +F Q+  ++  +    L LP R W
Sbjct: 4439 TMVRDRQHGPVIELNRIQVKRARAKGGLAGPDGIKSVFGQMVSKMSLLTQDVLFLPHRVW 4498

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK +GE  DD GG + ++I EMC EL +G++PL + TPNG  D G NRD ++LNP +++
Sbjct: 4499 KVKFVGESVDDCGGGYSESIAEMCDELQNGSLPLFIPTPNGREDNGTNRDCFLLNP-MAD 4557

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
            S   +  F+FLGIL G+AIRT  PL L L+  VWK +    +T  DL + D  Y   L  
Sbjct: 4558 SQLHMNMFQFLGILMGIAIRTGSPLSLNLAEPVWKQLAGILLTPADLTEVDRDYVPGLLC 4617

Query: 358  IRDI 361
            IRD+
Sbjct: 4618 IRDM 4621



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS G+LYT+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 4138 IACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDA 4197

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4198 QTLCVTDDDN-VWSWGDGDYGKLGRGGS 4224



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--N 471
           IACG  +SA +++NG LYT+G G+YGRLGHG   +   P  V  L    V  V+CG   +
Sbjct: 625 IACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDS 684

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+C+   G  V+++GDG+YGKLG G T    TP+
Sbjct: 685 QTLCVTASG-IVFSWGDGDYGKLGRGGTDGSKTPK 718



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 3/94 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA + SNG LYT+G G+YGRLGHG T+    P+ V AL    V  V+CG    
Sbjct: 3156 IACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDA 3215

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             T+ +   G  VY++GDG++GKLG G +    TP
Sbjct: 3216 QTMALTTDG-YVYSWGDGDFGKLGRGGSDGCYTP 3248



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 89/164 (54%), Gaps = 12/164 (7%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVP--LT 402
            +Y+++L  ++ IH++G ++  F  I+  E     C EG +  GR+          P  + 
Sbjct: 3037 VYSETLSKLKPIHIAGGSKTLF--IVSQEGKLYACGEGTN--GRLGLGDDNNMCEPKAIP 3092

Query: 403  FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
            F ++    + A+  G KH+  +T +G ++++G G+ G+LGHG  ++   P+ +  L    
Sbjct: 3093 FLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKR 3152

Query: 463  VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +  ++CG  H+  IA  G+ +Y +G GEYG+LG G+T  +  P+
Sbjct: 3153 IRDIACGSGHSAAIASNGE-LYTWGLGEYGRLGHGDTITQTRPK 3195



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 8/160 (5%)

Query: 352  AQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL-TFANRLQY 409
             +SL A+R I L+G  +  F      + +  G    GR+   + G  SV + T    +Q+
Sbjct: 4021 CESLSALRPIQLAGGEQTLFAVTADGKIYSTGYGAAGRLG--IGGTDSVMIPTLLESIQH 4078

Query: 410  Y---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
                + A++ G KH   ++S G++Y++G GD G+LGHG  +++  P+ +  L  V +  +
Sbjct: 4079 VFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDI 4138

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +CG +H+  I   G  +Y +G G YG+LG G++  +  P+
Sbjct: 4139 ACGGHHSAAITSAG-WLYTWGKGRYGRLGHGDSDDQLRPK 4177



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VPL   +        + CG + S  +T +G +YT+G GDY RLGHGT  + + P 
Sbjct: 4224 SDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPR 4283

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V AL    + S++ G  H V  +DKG+ V+ +GD + G+LG G T     P+
Sbjct: 4284 KVAALQGKKIISIATGSLHCVACSDKGE-VFTWGDNDEGQLGDGTTSALHRPR 4335



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 1/87 (1%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           KH   +T +G +Y++GNGD GRLGHG T+++  P+ + AL + ++  ++CG  ++  ++ 
Sbjct: 578 KHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAALSA 637

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G G YG+LG GN     TP
Sbjct: 638 NGE-LYTWGRGNYGRLGHGNFDDVMTP 663



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   I+ ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L +  
Sbjct: 3303 VEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDAR 3362

Query: 69   IRQVSAGRSHSAAWTAPPLPPH 90
            + +VS G SHS AW     P +
Sbjct: 3363 VNRVSCGSSHSIAWVLVDQPSN 3384



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T  G ++T+G GDY RLGHG   + + P  V  L    +  V+ G  H 
Sbjct: 3262 VECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHC 3321

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3322 LAVTDTGQ-VYAWGDNDHGQQGNGTTSVNRKP 3352



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            + IP      I  ++V  G +H LA++  G+VF+WG   D +LG GN I+  +P+L+  L
Sbjct: 3089 KAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEVL 3148

Query: 65   SNKNIRQVSAGRSHSAA 81
             +K IR ++ G  HSAA
Sbjct: 3149 KSKRIRDIACGSGHSAA 3165



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T++GY+Y++G+GD+G+LG G +     P  V  LN + V  V CG  
Sbjct: 3208 VACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQ 3267

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G+ V+ +G G+Y +LG GN
Sbjct: 3268 FSLALTKYGE-VWTWGKGDYFRLGHGN 3293



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 4/94 (4%)

Query: 407  LQYYEAA-IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            LQ Y+   +ACG     +  VT +  ++++G+GDYG+LG G +   KVP ++ +L  + V
Sbjct: 4182 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGV 4241

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              V CG   +V +   G AVY +G G+Y +LG G
Sbjct: 4242 VKVECGSQFSVALTRSG-AVYTWGKGDYHRLGHG 4274



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T G   P      L      + CG + SA +T++G +YT+G GD  RLGHG+  + + P+
Sbjct: 711 TDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPK 770

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL 494
            + +L    V+ +S G  H + + +  + VY +G  +YG++
Sbjct: 771 VIESLRDRKVKDLSVGTTHILALTED-QFVYGWGRNDYGQI 810



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V +S G +H +A+S+ G V++WG   D +LG GN+++Y  P+L+  L    I  ++ 
Sbjct: 4081 IKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIAC 4140

Query: 75   GRSHSAAWTA 84
            G  HSAA T+
Sbjct: 4141 GGHHSAAITS 4150



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 45/72 (62%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           K I ++      +H LA++  G V++WGN    +LG G+ I+Y EP+L+ AL  KNI  +
Sbjct: 566 KPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFI 625

Query: 73  SAGRSHSAAWTA 84
           + G ++SAA +A
Sbjct: 626 ACGSTYSAALSA 637



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSA--VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG   S    VT++G ++++G+GDYG+LG G T   K P+ V  L  ++V  V CG  
Sbjct: 677 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQ 736

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +  +   G+ VY +G G+  +LG G+
Sbjct: 737 FSAALTAHGE-VYTWGKGDAYRLGHGS 762



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G + P       N+ ++ +  G +  LA++  G+V+ WG     +LG GN  + R+P
Sbjct: 3241 GSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP 3300

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
             LV  L  K I  V+ G  H  A T
Sbjct: 3301 TLVEGLRGKKIIHVAVGALHCLAVT 3325



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    V  VSCG +H+
Sbjct: 3314 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHS 3373

Query: 474  V 474
            +
Sbjct: 3374 I 3374



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   K+  I DI+ G+ H  A+++ G+++ WG     +LG G+ I    P+LV AL    
Sbjct: 3145 IEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALIGHR 3204

Query: 69   IRQVSAG 75
            + QV+ G
Sbjct: 3205 VVQVACG 3211



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 3   GTSGRHIPA----FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
           GT G   P       +I++V +  G++   A++  G+V+ WG     +LG G++ + R P
Sbjct: 710 GTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYP 769

Query: 59  QLVLALSNKNIRQVSAGRSHSAAWT 83
           +++ +L ++ ++ +S G +H  A T
Sbjct: 770 KVIESLRDRKVKDLSVGTTHILALT 794



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG--LGNQINYREPQLVLALSN 66
           I + ++  + D+SVGT H+LA++    V+ WG N   Q+   LG  I+  EP L   LS+
Sbjct: 772 IESLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQIDPTLGPIIS--EPTLCPTLSS 829

Query: 67  KNIRQVSAGRSHSAAW 82
           K +  +++G + S AW
Sbjct: 830 KTVIGLASGPTQSFAW 845



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G ++T+G+ D G+LG GTT     P  V AL    +  V+CG  H
Sbjct: 4295 SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAH 4354

Query: 473  TV 474
            T+
Sbjct: 4355 TL 4356



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I     + IVDI+ G  H  A+++ G ++ WG     +LG G+  +   P++V AL +  
Sbjct: 4127 IEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYK 4186

Query: 69   IRQVSAG 75
            +  V+ G
Sbjct: 4187 VIDVACG 4193



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K   +V ++ G+     L V+ +G VF+WG+    +LG G     + P++V  L +
Sbjct: 666 VTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLD 725

Query: 67  KNIRQVSAGRSHSAAWTA 84
            N+ +V  G   SAA TA
Sbjct: 726 INVVKVFCGSQFSAALTA 743



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A    +I+ I+ G+ +  A+S  G+++ WG  +  +LG GN  +   P LV  L    
Sbjct: 614 IEALLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHT 673

Query: 69  IRQVSAGRSHS 79
           +  V+ G   S
Sbjct: 674 VVHVACGSGDS 684



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   K IHI     G++ +  VS  G+++A G  ++ +LGLG+  N  EP+ +  LS   
Sbjct: 3042 LSKLKPIHIAG---GSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFV 3098

Query: 69   IRQVS--AGRSHSAAWT 83
            I++V+  +G  H+ A T
Sbjct: 3099 IKKVAVHSGGKHALALT 3115


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 187/364 (51%), Gaps = 34/364 (9%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + A +   I+ I+ G+ H +A S+ G+VF WG+N + QLG G       P+LV AL  
Sbjct: 216 RKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQG 275

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
           K I +V+ G +H+ AW+             + + +  +P   P  Y  +++    ++R R
Sbjct: 276 KKITRVACGSAHTLAWST------------AKATQSRMPASTPMEYDLVKDLSYSVLRNR 323

Query: 127 LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
           L LL+ F++L+   + + P+          T +  L    L P+    +      + +  
Sbjct: 324 LVLLHHFAELLCPALAMFPI----------TGHIGL--SKLAPMLVYSIKEATFRKVIQA 371

Query: 187 TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
           TM+  +  GP + + R+  K  +          +K +F Q+  ++  +    L LP R W
Sbjct: 372 TMVRDRQHGPVIELNRIQVKRARAKGGLAGPDGIKSVFGQMMSKMSLLTQDVLFLPHRVW 431

Query: 238 KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
           KVK +GE  DD GG + ++I EMC EL +G++PL + TPNG  D G NRD ++LNP +++
Sbjct: 432 KVKFVGESVDDCGGGYSESIAEMCDELQNGSLPLFIPTPNGREDNGTNRDCFLLNP-MAD 490

Query: 298 SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
           S   +   +FLGIL G+AIRT  PL L L+  VWK +   P+T  DL + D  Y   L  
Sbjct: 491 SQLHMNMLQFLGILMGIAIRTGSPLSLNLAEPVWKQLAGIPLTPADLTEVDRDYVPGLLC 550

Query: 358 IRDI 361
           IRD+
Sbjct: 551 IRDM 554



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  HSA +TS G+LYT+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 71  IACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDA 130

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            T+C+ D    V+++GDG+YGKLG G +
Sbjct: 131 QTLCVTDDDN-VWSWGDGDYGKLGRGGS 157



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           + G  VPL   +        + CG + S  +T +G +YT+G GDY RLGHGT  + + P 
Sbjct: 157 SDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPR 216

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +V AL    + S++ G  H V  +DKG+ V+ +GD + G+LG G T     P+
Sbjct: 217 KVAALQGKKIISIATGSLHCVACSDKGE-VFTWGDNDEGQLGDGTTSALHRPR 268



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 1/96 (1%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A++ G KH   ++S G++Y++G GD G+LGHG  +++  P+ +  L  V +  ++CG 
Sbjct: 16  KVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGG 75

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +H+  I   G  +Y +G G YG+LG G++  +  P+
Sbjct: 76  HHSAAITSAG-WLYTWGKGRYGRLGHGDSDDQLRPK 110



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 407 LQYYEAA-IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           LQ Y+   +ACG     +  VT +  ++++G+GDYG+LG G +   KVP ++ +L  + V
Sbjct: 115 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGV 174

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             V CG   +V +   G AVY +G G+Y +LG G 
Sbjct: 175 VKVECGSQFSVALTRSG-AVYTWGKGDYHRLGHGT 208



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 43/70 (61%)

Query: 15 IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
          I  V +S G +H +A+S+ G V++WG   D +LG GN+++Y  P+L+  L    I  ++ 
Sbjct: 14 IKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIAC 73

Query: 75 GRSHSAAWTA 84
          G  HSAA T+
Sbjct: 74 GGHHSAAITS 83



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IA G  H    +  G ++T+G+ D G+LG GTT     P  V AL    +  V+CG  H
Sbjct: 228 SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAH 287

Query: 473 TV 474
           T+
Sbjct: 288 TL 289



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I     + IVDI+ G  H  A+++ G ++ WG     +LG G+  +   P++V AL +  
Sbjct: 60  IEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYK 119

Query: 69  IRQVSAG 75
           +  V+ G
Sbjct: 120 VIDVACG 126


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 200/418 (47%), Gaps = 33/418 (7%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4240 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4299

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4300 KKINRVACGSAHTLAWSTSK--PTNAGK---------LPAQVPMEYNHLQEIPIMALRNR 4348

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+  S+L    +   P+ +++    Q      +   +LR +   +       + V  
Sbjct: 4349 LVLLHHISELFCPCI---PMFDLEGRLGQTGHGPSVGFDTLRGILISQGKEAAFRKVVQA 4405

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R W
Sbjct: 4406 TMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRVW 4465

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK +GE  DD GG + ++I EMC EL +   PLL+ TPNG  ++G NRD ++LNP    
Sbjct: 4466 KVKFVGESVDDCGGGYSESIAEMCEELQNALTPLLIVTPNGRDESGANRDCFLLNPAAKS 4525

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
            +L   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L  
Sbjct: 4526 ALHMSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGLMY 4584

Query: 358  IRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD       EA   E   L   F   + +G+   I    +   +T  NR +Y   AI
Sbjct: 4585 IRD------NEATPEEFEALTLPFTVPNASGQ--DIQLSSKYSHITLENRAEYVRLAI 4634



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           +ACG  +SA +T++G LYT+G G+YGRLGHG++ +   P  V A   + V  V+CG    
Sbjct: 547 VACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDA 606

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 607 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 640



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T++G L+T+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 4095 IAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDA 4154

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4155 QTLCLTDD-DMVWSWGDGDYGKLGRGGS 4181



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LY++G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3101 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDA 3160

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3161 QTLALTDEG-FVFSWGDGDFGKLGRGGSEGCNVPQ 3194



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 91/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G ++P+    T  +
Sbjct: 2982 FSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSG-TIPIPRQITALS 3040

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3041 NYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3100

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  I   G+ +Y++G GEYG+LG G+  T L+P
Sbjct: 3101 IACGSSHSAAITSSGE-LYSWGLGEYGRLGHGDNTTQLRP 3139



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  +P+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4181 SDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4240

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4241 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4292



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT ++ + P+ V  L    +  V+ G  H 
Sbjct: 3207 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHC 3266

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3267 LAVTDTGQ-VYAWGDNDHGQQGNGTTTVNRKP 3297



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3248 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3307

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3308 ITRVACGSSHSVAWT 3322



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  I  ++V  G  H +A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3034 RQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3093

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3094 KTKRIRDIACGSSHSAAITS 3113



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPL--TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q+ P+  T    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 572 GRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 631

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ V  L  + +  V CG   +V +   G+ VY +G G+  +LG G
Sbjct: 632 GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQ-VYTWGKGDNQRLGHG 683



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 5/91 (5%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTV 474
           +H   ++SNG ++++G GD GRLGHG T   + P+ +   N      HV  V+CG  ++ 
Sbjct: 496 QHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSA 555

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            I   G+ +Y +G G YG+LG G++  + TP
Sbjct: 556 AITADGE-LYTWGRGNYGRLGHGSSEDQTTP 585



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  V V  ++ G 
Sbjct: 4040 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGG 4099

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G+ ++ +G G YG+LG G++   LKP
Sbjct: 4100 AHSACITASGE-LFTWGKGRYGRLGHGDSEDQLKP 4133



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   K+P ++ +L  + V  V CG  
Sbjct: 4147 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQ 4206

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4207 FSVALTKSG-AVYTWGKGDYHRLGHGS 4232



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G+++++G+GD+G+LG G +    VP+ +  LN   V  + CG  
Sbjct: 3153 VACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQ 3212

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G       PQ
Sbjct: 3213 FSLALTKSG-VVWTWGKGDYFRLGHGTDVHVRKPQ 3246



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  ++A
Sbjct: 4038 IRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAA 4097

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4098 GGAHSACITA 4107



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 40/70 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +YT+G GD  RLGHGT  + + P+ + +L    V  V+ G  H 
Sbjct: 653 VCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHC 712

Query: 474 VCIADKGKAV 483
           + + D G+ +
Sbjct: 713 LALTDDGEVL 722



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4252 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4311

Query: 473  TV 474
            T+
Sbjct: 4312 TL 4313



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + AFK + +VD++ G+     LAV+  GQV++WG+    +LG G     + P+LV  L +
Sbjct: 588 VTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 647

Query: 67  KNIRQVSAGRSHSAAWT 83
            +I +V  G   S A T
Sbjct: 648 LDIVKVCCGSQFSVALT 664



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 42/75 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +++ IV +  G++  +A++  GQV+ WG   + +LG G   + R P+L+ +L  K 
Sbjct: 642 VEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKK 701

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+ G +H  A T
Sbjct: 702 VVDVAVGSTHCLALT 716



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 46/76 (60%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + +   +VD++VG+ H LA+++ G+V +WG+N   Q       N ++P+ +  L++K+
Sbjct: 694 LDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTLFSNKKQPKALPGLNSKH 753

Query: 69  IRQVSAGRSHSAAWTA 84
           I  +S G   S AW++
Sbjct: 754 IVGISCGPGQSFAWSS 769



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G++++WG     +LG G+      P+L
Sbjct: 3082 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKL 3141

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3142 VKVLLGHRVIQVACG 3156



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 38/69 (55%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + + +VDI+ G  H   ++ +G++F WG     +LG G+  +  +P+LV AL  
Sbjct: 4082 RVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG 4141

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 4142 HRVIDVACG 4150



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G ++P  +NI       +  I  G +  LA++ +G V+ WG     +LG G  ++ R
Sbjct: 3186 GSEGCNVP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 3243

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3244 KPQMVEGLRGKKIVHVAVGALHCLAVT 3270



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3259 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3318

Query: 474  V 474
            V
Sbjct: 3319 V 3319



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 4/64 (6%)

Query: 25  EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL----SNKNIRQVSAGRSHSA 80
           +H LA+S+ G+VF+WG     +LG G+     EP+++       + K++  V+ G ++SA
Sbjct: 496 QHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSA 555

Query: 81  AWTA 84
           A TA
Sbjct: 556 AITA 559


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 214/423 (50%), Gaps = 43/423 (10%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S+ G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4359 KKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQG 4418

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K+I +V+ G +H+ A +   L           S RL    + P  Y  +++     + AR
Sbjct: 4419 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDMAPEALHAR 4467

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ FS+L+   + +LP+               L   +L+ +    +      + +  
Sbjct: 4468 LILLHHFSELLCPCLAMLPIAGD------------LSLGALKDVLVYNIKEAAFRKVIQT 4515

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  K  GP + + R+  K  ++          +K +F Q+ +++  +    L LP R 
Sbjct: 4516 TMVRDKQHGPVIELNRIQVKRSRSRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHRV 4575

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G+VPLL+ TPNG  + G NRD ++L+P L+
Sbjct: 4576 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLISTPNGRGEAGANRDCFLLDPTLT 4635

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              LQ  M F+FLG+L G+A+RT  PL L L+  VW+ +  E +  TDL + D  Y   L 
Sbjct: 4636 SVLQMNM-FRFLGVLMGIAVRTGSPLSLNLAEPVWRQLTGEALRPTDLTEVDRDYVAGLL 4694

Query: 357  AIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIAC 416
             IR++      +A     + L  F  +S  G   P+ T  +   ++  NR +Y   A+  
Sbjct: 4695 CIRNMD----DDAKLFNTLELP-FSTSSARGHEVPLST--RYTHISPRNRSEYVRLAL-- 4745

Query: 417  GFK 419
            GF+
Sbjct: 4746 GFR 4748



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA ++S G LYT+G G+YGRLGHG       P+ V AL    V  V+CG    
Sbjct: 3056 IACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDA 3115

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + + G AV+++GDG++GKLG G +    TP 
Sbjct: 3116 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSATPH 3149



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 5/95 (5%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN- 471
           ++ CG  +SA +T  G LYT+G G+YGRLGHG + +  +P  V+AL    V  V+ G   
Sbjct: 696 SVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGD 755

Query: 472 -HTVCIADKGKAVYAFGDGEYGKLGLG--NTGLKP 503
            HT+C+ ++G  VYA+GDG+YGKLG    N+ L+P
Sbjct: 756 AHTLCLTNEG-LVYAWGDGDYGKLGNASCNSSLQP 789



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 15/118 (12%)

Query: 396  GQSVPLTFANRLQYYE------------AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH 443
            G+   L   NRL Y              A IACG  HSA +T++G++ T+G G YGRLGH
Sbjct: 4184 GEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 4243

Query: 444  GTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            G + +   P+ V AL       ++CG     T+CI D    V+++GDG+YGKLG G +
Sbjct: 4244 GDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN-VWSWGDGDYGKLGRGGS 4300



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 88/160 (55%), Gaps = 10/160 (6%)

Query: 351  YAQSLRAIRDIHLSGVTEANF---PEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRL 407
            ++Q++  +R IH++G +++ F    +     C EG +  GR+   VT    +P       
Sbjct: 2938 FSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGTN--GRLGLGVTHNVPLPHQLPVLH 2995

Query: 408  QYY--EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
            QY   + A+  G KH+  +T +G ++++G G+ G+LGHG       P  V AL    +  
Sbjct: 2996 QYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRD 3055

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  I+ +G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3056 IACGSSHSAAISSQGE-LYTWGLGEYGRLGHGDNATQLKP 3094



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 1/84 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GD+ RLGHG+  + + P++V AL    + S++ G  H 
Sbjct: 4320 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4379

Query: 474  VCIADKGKAVYAFGDGEYGKLGLG 497
            V  +D G+ VY +GD + G+LG G
Sbjct: 4380 VACSDAGE-VYTWGDNDEGQLGDG 4402



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P+ +  L    V  V+ G  H 
Sbjct: 3162 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHC 3221

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 3222 LAVTDAGQ-VYAWGDNDHGQQGSGNTFVNKKP 3252



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 47/88 (53%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV++ GQV+AWG+N   Q G GN    ++P LV+ L    
Sbjct: 3203 IAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF 3262

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTP 96
            + +V+ G SHS AW  P   P      P
Sbjct: 3263 VNRVACGSSHSMAWGLPNASPDEEKRGP 3290



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 5/112 (4%)

Query: 398  SVPLTFANRLQYY---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
            S+P T    LQ+    + A+  G KH   +T++G +Y +G G+ G+LGHG  +++  P+ 
Sbjct: 4144 SIP-TLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKL 4202

Query: 455  VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +  LN + V  ++CG  H+  I   G  V  +G G YG+LG G++  +  P+
Sbjct: 4203 LEHLNGMSVADIACGSAHSAAITASGH-VLTWGKGRYGRLGHGDSEDQLRPK 4253



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 41/64 (64%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V +  G +H LA++  G+VF+WG   D +LG GN+    +P+LV AL  K IR ++ G S
Sbjct: 3002 VAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSS 3061

Query: 78   HSAA 81
            HSAA
Sbjct: 3062 HSAA 3065



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 45/67 (67%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V ++ G +H LA++  G+V+AWG   D +LG GN+++Y  P+L+  L+  ++  ++ G +
Sbjct: 4160 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSA 4219

Query: 78   HSAAWTA 84
            HSAA TA
Sbjct: 4220 HSAAITA 4226



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 3/114 (2%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHG 444
            GR+    +  Q  P      L Y    IACG     +  +T +  ++++G+GDYG+LG G
Sbjct: 4239 GRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4298

Query: 445  TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +   K+P ++ +L  + V  V CG   +V +   G AVY +G G++ +LG G+
Sbjct: 4299 GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGS 4351



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 6/127 (4%)

Query: 373 EIIPLECFEGASWTGRITPIVTGGQSVPLTFAN--RLQYYEAAIACGFKHSAVVTSNGYL 430
           +I+ L   EG  +   I+   T  Q  PL F +     +   A  C  +H   V +N   
Sbjct: 605 DIVLLLSKEGKLYNWHISKPDTEPQ--PLDFGDIGSETFISIASHCEGRHFLAVDNNFNA 662

Query: 431 YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490
           Y++G GD  RLGHG   + ++P ++ +L +  V+SV CG +++  I  +G  +Y +G G 
Sbjct: 663 YSWGTGDNRRLGHGDCHSRELPTKIESLVR-RVKSVYCGCSYSAAITLRGN-LYTWGRGN 720

Query: 491 YGKLGLG 497
           YG+LG G
Sbjct: 721 YGRLGHG 727



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G ++++G+GD+G+LG G +     P  +  L+ + V  + CG  
Sbjct: 3108 VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQ 3167

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 3168 FSLALTRAGE-VWTWGKGDYYRLGHGGDQHVRKPQ 3201



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G +YT+G+ D G+LG GT    + P  V AL   H+  V+CG  H
Sbjct: 4371 SIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 4430

Query: 473  TVCIA 477
            T+ ++
Sbjct: 4431 TLALS 4435



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 38/69 (55%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I DI+ G+ H  A+S+ G+++ WG     +LG G+     +P+LV AL  
Sbjct: 3043 RLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALCG 3102

Query: 67   KNIRQVSAG 75
              + QV+ G
Sbjct: 3103 SRVIQVACG 3111



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G G T   K P  V+ L+ V V  V+CG +H+
Sbjct: 3214 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 3273

Query: 474  V 474
            +
Sbjct: 3274 M 3274



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 28/41 (68%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
           R I + ++  IVD++VG  H LA+S+ G++F WG N + Q+
Sbjct: 842 RLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI 882



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 36/76 (47%)

Query: 8    HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
             I     I +V I  G +  LA++  G+V+ WG     +LG G   + R+PQ +  L  +
Sbjct: 3150 EIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGR 3209

Query: 68   NIRQVSAGRSHSAAWT 83
             +  V+ G  H  A T
Sbjct: 3210 RVIHVAVGALHCLAVT 3225



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 7/104 (6%)

Query: 387 GRITPIVTGGQSVPLTFANRL---QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH 443
           GR+   ++  Q +P T    L   Q  + A+  G  H+  +T+ G +Y +G+GDYG+LG+
Sbjct: 722 GRLGHGISDDQCLP-TMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGN 780

Query: 444 GTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +  +   P  +  L +  V+ V  G   ++ +  +G+ +Y++G
Sbjct: 781 ASCNSSLQPLLIECLPR--VQRVFAGSQFSLALTGEGQ-LYSWG 821



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A K+  +VD+++G+   H L ++N G V+AWG+    +LG  +  +  +P L+  L  
Sbjct: 738 VMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECL-- 795

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V AG   S A T
Sbjct: 796 PRVQRVFAGSQFSLALT 812


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 192/365 (52%), Gaps = 34/365 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S++G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 2086 KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQG 2145

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K+I +V+ G +H+ A +   L           S RL    + P  Y  +++     + AR
Sbjct: 2146 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDLAPEALHAR 2194

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ FS+L+   + +LP+               L   +L+ +    +      + +  
Sbjct: 2195 LILLHHFSELVCPCLAMLPISGD------------LSLGALKDVLVYNIKEAAFRKVIQT 2242

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  K  GP + + R+  K  ++          +K +F Q+ +++  +    L LP R 
Sbjct: 2243 TMVRDKQHGPVIELNRIQVKRSRSRCNGLAGVDGMKSVFGQMVQKLPLLTQEALALPHRV 2302

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G+VPLL+ TPNG  + G NRD ++L+P LS
Sbjct: 2303 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLS 2362

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              LQ  M F+FLG+L G+A+RT  PL + L+  VW+ +  E +  TDL + D  Y   L 
Sbjct: 2363 SVLQMNM-FRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEILRPTDLTEVDRDYVAGLL 2421

Query: 357  AIRDI 361
             IR++
Sbjct: 2422 CIRNM 2426



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 101/190 (53%), Gaps = 15/190 (7%)

Query: 324 LPLSPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE---- 378
           LP + +VW L  +E +      +     ++Q++  +R IH++G +++ F  I+  +    
Sbjct: 730 LPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLF--IVSQDGKVY 787

Query: 379 -CFEGASWTGRITPIVTGGQSVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGN 435
            C EG +  GR+   VT    +P       QY   + A+  G KH+  +T +G ++++G 
Sbjct: 788 ACGEGTN--GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGE 845

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G+ G+LGHG       P  V AL    +  V+CG +H+  I+ +G+ +Y +G GEYG+LG
Sbjct: 846 GEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGE-LYTWGLGEYGRLG 904

Query: 496 LGN--TGLKP 503
            G+  T LKP
Sbjct: 905 HGDNATQLKP 914



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           +ACG  HSA ++S G LYT+G G+YGRLGHG       P+ V AL    V  V+CG    
Sbjct: 876 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSRDA 935

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G AV+++GDG++GKLG G +    TP 
Sbjct: 936 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPH 969



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 15/118 (12%)

Query: 396  GQSVPLTFANRLQYYE------------AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH 443
            G+   L   NR+ Y              A IACG  HSA +T++G++ T+G G YGRLGH
Sbjct: 1911 GEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 1970

Query: 444  GTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            G + +   P+ V AL       ++CG     T+CI D    V+++GDG+YGKLG G +
Sbjct: 1971 GDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN-VWSWGDGDYGKLGRGGS 2027



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GD+ RLGHG+  + + P++V AL    + S++ G  H 
Sbjct: 2047 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 2106

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
            V  +D G+ VY +GD + G+LG G 
Sbjct: 2107 VACSDSGE-VYTWGDNDEGQLGDGT 2130



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   +T+ G +Y +G G+ G+LGHG  M++  P+ V  LN + V  ++CG 
Sbjct: 1886 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGS 1945

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             H+  I   G  V  +G G YG+LG G++
Sbjct: 1946 AHSAAITASGH-VLTWGKGRYGRLGHGDS 1973



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P+ +  L    V  V+ G  H 
Sbjct: 982  IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHC 1041

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 1042 LAVTDAGQ-VYAWGDNDHGQQGSGNTFVNKKP 1072



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV++ GQV+AWG+N   Q G GN    ++P LV+ L    
Sbjct: 1023 IGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF 1082

Query: 69   IRQVSAGRSHSAAWTAP 85
            + +V+ G SHS AW  P
Sbjct: 1083 VNRVACGSSHSIAWGLP 1099



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 45/67 (67%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V ++ G +H LA++  G+V+AWG   D +LG GN+++Y  P+LV  L+  ++  ++ G +
Sbjct: 1887 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA 1946

Query: 78   HSAAWTA 84
            HSAA TA
Sbjct: 1947 HSAAITA 1953



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 18  VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
           V +  G +H LA++  G+VF+WG   D +LG GN+    +P+LV AL  K IR V+ G S
Sbjct: 822 VAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSS 881

Query: 78  HSAA 81
           HSAA
Sbjct: 882 HSAA 885



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 407  LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            L Y    IACG     +  +T +  ++++G+GDYG+LG G +   K+P ++ +L  + V 
Sbjct: 1986 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVV 2045

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             V CG   +V +   G AVY +G G++ +LG G+
Sbjct: 2046 KVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGS 2078



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G ++++G+GD+G+LG G +     P  +  L+ + V  + CG  
Sbjct: 928  VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQ 987

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 988  FSLALTRAGE-VWTWGKGDYYRLGHGGDQHVRKPQ 1021



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    + +G +YT+G+ D G+LG GT    + P  V AL   H+  V+CG  H
Sbjct: 2098 SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 2157

Query: 473  TVCIA 477
            T+ ++
Sbjct: 2158 TLALS 2162



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + A +   I D++ G+ H  A+S+ G+++ WG     +LG G+     +P+LV AL+ 
Sbjct: 863 RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAG 922

Query: 67  KNIRQVSAG 75
           + + QV+ G
Sbjct: 923 RRVVQVACG 931



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G G T   K P  V+ L+ V V  V+CG +H+
Sbjct: 1034 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 1093

Query: 474  V 474
            +
Sbjct: 1094 I 1094



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 36/76 (47%)

Query: 8    HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
             I     I +V I  G +  LA++  G+V+ WG     +LG G   + R+PQ +  L  +
Sbjct: 970  EIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR 1029

Query: 68   NIRQVSAGRSHSAAWT 83
             +  V+ G  H  A T
Sbjct: 1030 RVIHVAVGALHCLAVT 1045



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 32/67 (47%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +     + + DI+ G+ H  A++ +G V  WG     +LG G+  +   P+LV AL    
Sbjct: 1930 VEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYR 1989

Query: 69   IRQVSAG 75
               ++ G
Sbjct: 1990 AIDIACG 1996


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 217/425 (51%), Gaps = 47/425 (11%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S++G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4334 KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQG 4393

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K+I +V+ G +H+ A +   L           S RL    + P  Y  +++     + AR
Sbjct: 4394 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDLAPEALHAR 4442

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ FS+L+   + +LP+               L   +L+ +    +      + +  
Sbjct: 4443 LILLHHFSELVCPCLAMLPISGD------------LSLGALKDVLVYNIKEAAFRKVIQT 4490

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  K  GP + + R+  K  ++          +K +F Q+ +++  +    L LP R 
Sbjct: 4491 TMVRDKQHGPVIELNRIQVKRSRSRCNGLAGVDGMKSVFGQMVQKLPLLTQEALALPHRV 4550

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G+VPLL+ TPNG  + G NRD ++L+P LS
Sbjct: 4551 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLS 4610

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              LQ  M F+FLG+L G+A+RT  PL + L+  VW+ +  E +  TDL + D  Y   L 
Sbjct: 4611 SVLQMNM-FRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLL 4669

Query: 357  AIRDIHLSGVTEANFPEII-PLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IR++        + P++   LE  F  +S  G   P+ T  +   ++  NR +Y    +
Sbjct: 4670 CIRNMD-------DDPKLFNALELPFSTSSARGHEVPLST--RYTHISPKNRTEYVR--L 4718

Query: 415  ACGFK 419
            A GF+
Sbjct: 4719 ALGFR 4723



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +ACG  HSA ++S G LYT+G G+YGRLGHG  +    P+ VVAL    V  V+CG    
Sbjct: 3127 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSRDA 3186

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + + G AV+++GDG++GKLG G +    TP 
Sbjct: 3187 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPH 3220



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 101/190 (53%), Gaps = 15/190 (7%)

Query: 324  LPLSPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE---- 378
            LP + +VW L  +E +      +     ++Q++  +R IH++G +++ F  I+  +    
Sbjct: 2981 LPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLF--IVSQDGKVY 3038

Query: 379  -CFEGASWTGRITPIVTGGQSVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGN 435
             C EG +  GR+   VT    +P       QY   + A+  G KH+  +T +G ++++G 
Sbjct: 3039 ACGEGTN--GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGE 3096

Query: 436  GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            G+ G+LGHG       P  V AL    +  V+CG +H+  I+ +G+ +Y +G GEYG+LG
Sbjct: 3097 GEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGE-LYTWGLGEYGRLG 3155

Query: 496  LGN--TGLKP 503
             G+  T LKP
Sbjct: 3156 HGDNVTQLKP 3165



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 15/118 (12%)

Query: 396  GQSVPLTFANRLQYYE------------AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH 443
            G+   L   NR+ Y              A IACG  HSA +T++G++ T+G G YGRLGH
Sbjct: 4159 GEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 4218

Query: 444  GTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            G + +   P+ V AL       ++CG     T+CI D    V+++GDG+YGKLG G +
Sbjct: 4219 GDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN-VWSWGDGDYGKLGRGGS 4275



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T  ++VP   A   Q+   ++ CG  +SA +T  G L T+G G Y RLGHG + +  +P 
Sbjct: 650 THARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPT 709

Query: 454 RVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            VVAL+   V  V+ G    H++ +  +G  V+A+GDG+YGKLG GN 
Sbjct: 710 LVVALSDHMVVDVALGSGDAHSLALTSEG-LVFAWGDGDYGKLGNGNC 756



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GD+ RLGHG+  + + P++V AL    + S++ G  H 
Sbjct: 4295 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4354

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
            V  +D G+ VY +GD + G+LG G 
Sbjct: 4355 VACSDSGE-VYTWGDNDEGQLGDGT 4378



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   +T+ G +Y +G G+ G+LGHG  M++  P+ V  LN + V  ++CG 
Sbjct: 4134 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGS 4193

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             H+  I   G  V  +G G YG+LG G++
Sbjct: 4194 AHSAAITASGH-VLTWGKGRYGRLGHGDS 4221



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P+ +  L    V  V+ G  H 
Sbjct: 3233 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHC 3292

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 3293 LAVTDAGQ-VYAWGDNDHGQQGSGNTFVNKKP 3323



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV++ GQV+AWG+N   Q G GN    ++P LV+ L    
Sbjct: 3274 IGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF 3333

Query: 69   IRQVSAGRSHSAAWTAP 85
            + +V+ G SHS AW  P
Sbjct: 3334 VNRVACGSSHSIAWGLP 3350



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 3/125 (2%)

Query: 381 EGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           EG  +T R+       + +P+       +   A  C  +H   + SN   Y++G G+  R
Sbjct: 587 EGKLYTWRLAK--PEAEPLPMEEVAHEVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHR 644

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LGHG T    VP ++ AL +  V+SV CG +++  I   G  +  +G G Y +LG GN+ 
Sbjct: 645 LGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGN-LLTWGRGTYARLGHGNSD 703

Query: 501 LKPTP 505
            +  P
Sbjct: 704 DRSLP 708



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 45/67 (67%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V ++ G +H LA++  G+V+AWG   D +LG GN+++Y  P+LV  L+  ++  ++ G +
Sbjct: 4135 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA 4194

Query: 78   HSAAWTA 84
            HSAA TA
Sbjct: 4195 HSAAITA 4201



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V +  G +H LA++  G+VF+WG   D +LG GN+    +P+LV AL  K IR V+ G S
Sbjct: 3073 VAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSS 3132

Query: 78   HSAA 81
            HSAA
Sbjct: 3133 HSAA 3136



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 407  LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            L Y    IACG     +  +T +  ++++G+GDYG+LG G +   K+P ++ +L  + V 
Sbjct: 4234 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVV 4293

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             V CG   +V +   G AVY +G G++ +LG G+
Sbjct: 4294 KVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGS 4326



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G ++++G+GD+G+LG G +     P  +  L+ + V  + CG  
Sbjct: 3179 VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQ 3238

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 3239 FSLALTRAGE-VWTWGKGDYYRLGHGGDQHVRKPQ 3272



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 42/69 (60%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I D++ G+ H  A+S+ G+++ WG     +LG G+ +   +P+LV+AL+ 
Sbjct: 3114 RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAG 3173

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3174 RRVVQVACG 3182



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    + +G +YT+G+ D G+LG GT    + P  V AL   H+  V+CG  H
Sbjct: 4346 SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 4405

Query: 473  TVCIA 477
            T+ ++
Sbjct: 4406 TLALS 4410



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G G T   K P  V+ L+ V V  V+CG +H+
Sbjct: 3285 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 3344

Query: 474  V 474
            +
Sbjct: 3345 I 3345



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 36/76 (47%)

Query: 8    HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
             I     I +V I  G +  LA++  G+V+ WG     +LG G   + R+PQ +  L  +
Sbjct: 3221 EIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR 3280

Query: 68   NIRQVSAGRSHSAAWT 83
             +  V+ G  H  A T
Sbjct: 3281 RVIHVAVGALHCLAVT 3296



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 3/77 (3%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G  HS  +TS G ++ +G+GDYG+LG+G       P  V +L +  V+ V  G 
Sbjct: 721 DVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRVFAGS 778

Query: 471 NHTVCIADKGKAVYAFG 487
             ++ ++ +G+ +Y++G
Sbjct: 779 QFSLALSSEGQ-LYSWG 794



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 27/41 (65%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
           R + + ++  IVD++V   H LA+S++G+VF WG N   Q+
Sbjct: 815 RLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 855



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A +   +  +  G  +  A++  G +  WG  + A+LG GN  +   P LV+ALS+  
Sbjct: 659 IAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHM 718

Query: 69  IRQVS--AGRSHSAAWTAPPL 87
           +  V+  +G +HS A T+  L
Sbjct: 719 VVDVALGSGDAHSLALTSEGL 739



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A  +  +VD+++G+   H LA+++ G VFAWG+    +LG GN     +P LV +L  
Sbjct: 711 VVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL-- 768

Query: 67  KNIRQVSAGRSHSAAWTA 84
             +++V AG   S A ++
Sbjct: 769 PRVQRVFAGSQFSLALSS 786



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 35/75 (46%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            MS    + +     + + DI+ G+ H  A++ +G V  WG     +LG G+  +   P+L
Sbjct: 4170 MSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKL 4229

Query: 61   VLALSNKNIRQVSAG 75
            V AL       ++ G
Sbjct: 4230 VEALLGYRAIDIACG 4244


>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
 gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
          Length = 725

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 216/425 (50%), Gaps = 47/425 (11%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + A +   I+ I+ G+ H +A S++G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 151 KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQG 210

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
           K+I +V+ G +H+ A +   L           S RL    + P  Y  +++     + AR
Sbjct: 211 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDLAPEALHAR 259

Query: 127 LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
           L LL+ FS+L+   + +LP+               L   +L+ +    +      + +  
Sbjct: 260 LILLHHFSELVCPCLAMLPISGD------------LSLGALKDVLVYNIKEAAFRKVIQT 307

Query: 187 TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
           TM+  K  GP + + R+  K  +           +K +F Q+ +++  +    L LP R 
Sbjct: 308 TMVRDKQHGPVIELNRIQVKRSRNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHRV 367

Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
           WKVK +GE  DD GG + ++I EMC EL +G+VPLL+ TPNG  + G NRD ++L+P LS
Sbjct: 368 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLS 427

Query: 297 ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
             LQ  M F+FLG+L G+A+RT  PL + L+  VW+ +  E +  TDL + D  Y   L 
Sbjct: 428 SVLQMNM-FRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLL 486

Query: 357 AIRDIHLSGVTEANFPEII-PLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IR++        + P++   LE  F  +S  G   P+ T  +   ++  NR +Y   A+
Sbjct: 487 CIRNMD-------DDPKLFTALELPFSTSSARGHEVPLST--RYTHISPRNRAEYVRLAL 537

Query: 415 ACGFK 419
             GF+
Sbjct: 538 --GFR 540



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 3/90 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IACG  HSA +T++G++ T+G G YGRLGHG + +   P+ V AL       ++CG  
Sbjct: 4   ADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSG 63

Query: 472 --HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
              T+CI D    V+++GDG+YGKLG G +
Sbjct: 64  DAQTLCITDDDN-VWSWGDGDYGKLGRGGS 92



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +YT+G GD+ RLGHG+  + + P++V AL    + S++ G  H 
Sbjct: 112 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 171

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           V  +D G+ VY +GD + G+LG G 
Sbjct: 172 VACSDSGE-VYTWGDNDEGQLGDGT 195



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 407 LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
           L Y    IACG     +  +T +  ++++G+GDYG+LG G +   K+P ++ +L  + V 
Sbjct: 51  LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVV 110

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            V CG   +V +   G AVY +G G++ +LG G+
Sbjct: 111 KVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGS 143



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IA G  H    + +G +YT+G+ D G+LG GT    + P  V AL   H+  V+CG  H
Sbjct: 163 SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 222

Query: 473 TVCIA 477
           T+ ++
Sbjct: 223 TLALS 227


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 191/365 (52%), Gaps = 34/365 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S++G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4338 KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQG 4397

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K+I +V+ G +H+ A +   L           S RL    + P  Y  +++     + AR
Sbjct: 4398 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDLAPEALHAR 4446

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ FS+L+   + +LP+               L   +L+ +    +      + +  
Sbjct: 4447 LILLHHFSELVCPCLAMLPISGD------------LSLGALKDVLVYNIKEAAFRKVIQT 4494

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  K  GP + + R+  K  +           +K +F Q+ +++  +    L LP R 
Sbjct: 4495 TMVRDKQHGPVIELNRIQVKRSRNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHRV 4554

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G+VPLL+ TPNG  + G NRD ++L+P LS
Sbjct: 4555 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLS 4614

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              LQ  M F+FLG+L G+A+RT  PL + L+  VW+ +  E +  TDL + D  Y   L 
Sbjct: 4615 SVLQMNM-FRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLL 4673

Query: 357  AIRDI 361
             IR++
Sbjct: 4674 CIRNM 4678



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 101/190 (53%), Gaps = 15/190 (7%)

Query: 324  LPLSPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE---- 378
            LP + +VW L  +E +      +     ++Q++  +R IH++G +++ F  I+  +    
Sbjct: 2984 LPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLF--IVSQDGKVY 3041

Query: 379  -CFEGASWTGRITPIVTGGQSVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGN 435
             C EG +  GR+   VT    +P       QY   + A+  G KH+  +T +G ++++G 
Sbjct: 3042 ACGEGTN--GRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGE 3099

Query: 436  GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            G+ G+LGHG       P  V AL    +  V+CG +H+  I+ +G+ +Y +G GEYG+LG
Sbjct: 3100 GEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGE-LYTWGLGEYGRLG 3158

Query: 496  LGN--TGLKP 503
             G+  T LKP
Sbjct: 3159 HGDNTTQLKP 3168



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +ACG  HSA ++S G LYT+G G+YGRLGHG       P+ V AL    V  V+CG    
Sbjct: 3130 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDA 3189

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + + G AV+++GDG++GKLG G +    TP 
Sbjct: 3190 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPH 3223



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 15/118 (12%)

Query: 396  GQSVPLTFANRLQYYE------------AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH 443
            G+   L   NR+ Y              A IACG  HSA +T++G++ T+G G YGRLGH
Sbjct: 4163 GEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 4222

Query: 444  GTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            G + +   P+ V AL       ++CG     T+CI D    V+++GDG+YGKLG G +
Sbjct: 4223 GDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN-VWSWGDGDYGKLGRGGS 4279



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T  ++VP   A   Q+   ++ CG  +SA +T  G L T+G G Y RLGHG + +  +P 
Sbjct: 653 THARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPT 712

Query: 454 RVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            VVAL+   V  V+ G    H++ +  +G  V+A+GDG+YGKLG GN 
Sbjct: 713 LVVALSDHMVVDVALGSGDAHSLALTSEG-LVFAWGDGDYGKLGNGNC 759



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GD+ RLGHG+  + + P++V AL    + S++ G  H 
Sbjct: 4299 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4358

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
            V  +D G+ VY +GD + G+LG G 
Sbjct: 4359 VACSDSGE-VYTWGDNDEGQLGDGT 4382



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   +T+ G +Y +G G+ G+LGHG  M++  P+ V  LN + V  ++CG 
Sbjct: 4138 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGS 4197

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             H+  I   G  V  +G G YG+LG G++
Sbjct: 4198 AHSAAITASGH-VLTWGKGRYGRLGHGDS 4225



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P+ +  L    V  V+ G  H 
Sbjct: 3236 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHC 3295

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 3296 LAVTDAGQ-VYAWGDNDHGQQGSGNTFVNKKP 3326



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV++ GQV+AWG+N   Q G GN    ++P LV+ L    
Sbjct: 3277 IGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF 3336

Query: 69   IRQVSAGRSHSAAWTAP 85
            + +V+ G SHS AW  P
Sbjct: 3337 VNRVACGSSHSIAWGLP 3353



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 2/76 (2%)

Query: 8    HIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
             +P  +   +  ++V  G +H LA++  G+VF+WG   D +LG GN+    +P+LV AL 
Sbjct: 3064 QLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALR 3123

Query: 66   NKNIRQVSAGRSHSAA 81
             K IR V+ G SHSAA
Sbjct: 3124 AKKIRDVACGSSHSAA 3139



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 46/70 (65%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +  V ++ G +H LA++  G+V+AWG   D +LG GN+++Y  P+LV  L+  ++  ++ 
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIAC 4195

Query: 75   GRSHSAAWTA 84
            G +HSAA TA
Sbjct: 4196 GSAHSAAITA 4205



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVC 475
           C  +H   + SN   Y++G G+  RLGHG T    VP ++ AL +  V+SV CG +++  
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 682

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I   G  +  +G G Y +LG GN+  +  P
Sbjct: 683 ITCGGN-LLTWGRGTYARLGHGNSDDRSLP 711



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 407  LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            L Y    IACG     +  +T +  ++++G+GDYG+LG G +   K+P ++ +L  + V 
Sbjct: 4238 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVV 4297

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             V CG   +V +   G AVY +G G++ +LG G+
Sbjct: 4298 KVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGS 4330



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G ++++G+GD+G+LG G +     P  +  L+ + V  + CG  
Sbjct: 3182 VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQ 3241

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 3242 FSLALTRAGE-VWTWGKGDYYRLGHGGDQHVRKPQ 3275



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    + +G +YT+G+ D G+LG GT    + P  V AL   H+  V+CG  H
Sbjct: 4350 SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 4409

Query: 473  TVCIA 477
            T+ ++
Sbjct: 4410 TLALS 4414



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I D++ G+ H  A+S+ G+++ WG     +LG G+     +P+LV AL+ 
Sbjct: 3117 RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAG 3176

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3177 RRVVQVACG 3185



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G G T   K P  V+ L+ V V  V+CG +H+
Sbjct: 3288 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 3347

Query: 474  V 474
            +
Sbjct: 3348 I 3348



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 36/76 (47%)

Query: 8    HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
             I     I +V I  G +  LA++  G+V+ WG     +LG G   + R+PQ +  L  +
Sbjct: 3224 EIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR 3283

Query: 68   NIRQVSAGRSHSAAWT 83
             +  V+ G  H  A T
Sbjct: 3284 RVIHVAVGALHCLAVT 3299



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G  HS  +TS G ++ +G+GDYG+LG+G       P  V +L +  V+ V  G 
Sbjct: 724 DVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRVFAGS 781

Query: 471 NHTVCIADKGKAVYAFG 487
             +V ++ +G+ +Y +G
Sbjct: 782 QFSVALSSEGQ-LYTWG 797



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 27/41 (65%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
           R + + ++  IVD++V   H LA+S++G+VF WG N   Q+
Sbjct: 818 RLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A +   +  +  G  +  A++  G +  WG  + A+LG GN  +   P LV+ALS+  
Sbjct: 662 IAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHM 721

Query: 69  IRQVS--AGRSHSAAWTAPPL 87
           +  V+  +G +HS A T+  L
Sbjct: 722 VVDVALGSGDAHSLALTSEGL 742



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A  +  +VD+++G+   H LA+++ G VFAWG+    +LG GN     +P LV +L  
Sbjct: 714 VVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL-- 771

Query: 67  KNIRQVSAGRSHSAAWTA 84
             +++V AG   S A ++
Sbjct: 772 PRVQRVFAGSQFSVALSS 789



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 35/75 (46%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            MS    + +     + + DI+ G+ H  A++ +G V  WG     +LG G+  +   P+L
Sbjct: 4174 MSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKL 4233

Query: 61   VLALSNKNIRQVSAG 75
            V AL       ++ G
Sbjct: 4234 VEALLGYRAIDIACG 4248


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 192/365 (52%), Gaps = 34/365 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S++G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4513 KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSALQG 4572

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K+I +V+ G +H+ A +   L           S RL    + P  Y  +++     + AR
Sbjct: 4573 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDLAPEALHAR 4621

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ FS+L+   + +LP+               L   +L+ +    +      + +  
Sbjct: 4622 LILLHHFSELLCPCLAMLPISGD------------LSLGALKDVLVYNIKEAAFRKVIQT 4669

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  K  GP + + R+  K  ++          +K +F Q+ +++  +    L LP R 
Sbjct: 4670 TMVRDKQHGPVIELNRIQVKRSRSRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHRV 4729

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G+VPLL+ TPNG  + G NRD ++L+P LS
Sbjct: 4730 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLISTPNGRGEAGANRDCFLLDPTLS 4789

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              LQ  M F+FLG+L G+A+RT  PL + L+  VW+ +  E +  TDL + D  Y   L 
Sbjct: 4790 SVLQMNM-FRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLL 4848

Query: 357  AIRDI 361
             IR++
Sbjct: 4849 CIRNM 4853



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 15/190 (7%)

Query: 324  LPLSPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE---- 378
            LP + +VW L  +E +      +     ++Q++  +R IH++G +++ F  I+  E    
Sbjct: 3072 LPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLF--IVSQEGRVF 3129

Query: 379  -CFEGASWTGRITPIVTGGQSVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGN 435
             C EG +  GR+   VT    +P       QY   + A+  G KH+  +T +G ++++G 
Sbjct: 3130 ACGEGTN--GRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGE 3187

Query: 436  GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            G+ G+LGHG       P +V AL    +  V+CG +H+  I+ +G+ +Y +G GEYG+LG
Sbjct: 3188 GEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGE-LYTWGLGEYGRLG 3246

Query: 496  LGN--TGLKP 503
             G+  T LKP
Sbjct: 3247 HGDNATQLKP 3256



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +ACG  HSA ++S G LYT+G G+YGRLGHG       P+ V AL    V  V+CG    
Sbjct: 3218 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDA 3277

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + + G AV+++GDG++GKLG G +    TP 
Sbjct: 3278 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPH 3311



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            A IACG  HSA +T++G + T+G G YGRLGHG + +   P+ V AL       ++CG  
Sbjct: 4366 ADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSG 4425

Query: 472  --HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
               T+CI D    V+++GDG+YGKLG G +
Sbjct: 4426 DAQTLCITDDDN-VWSWGDGDYGKLGRGGS 4454



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 3/120 (2%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           GA    R+    T  ++VP   A   Q+   ++ CG  +SAV+T  G L T+G G Y RL
Sbjct: 656 GAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTYARL 715

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           GHG + +  +P  V AL +  V  V+ G    H++ +  +G  V+A+GDG+YGKLG GN 
Sbjct: 716 GHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEG-LVFAWGDGDYGKLGNGNC 774



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GD+ RLGHG+  + + P++V AL    + S++ G  H 
Sbjct: 4474 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4533

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
            V  +D G+ VY +GD + G+LG G 
Sbjct: 4534 VACSDSGE-VYTWGDNDEGQLGDGT 4557



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 47/77 (61%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV+++GQV+AWG+N   Q G GN    ++P LV+ L +  
Sbjct: 3365 IGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDDVF 3424

Query: 69   IRQVSAGRSHSAAWTAP 85
            + +V+ G SHS AW  P
Sbjct: 3425 VNRVACGSSHSIAWGLP 3441



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P+ +  L    V  V+ G  H 
Sbjct: 3324 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHC 3383

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 3384 LAVTDSGQ-VYAWGDNDHGQQGSGNTFVNKKP 3414



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 1/89 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   +T+ G +Y +G G+ G+LGHG  +++  P+ V  L+ + V  ++CG 
Sbjct: 4313 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGS 4372

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             H+  I   G+ V  +G G YG+LG G++
Sbjct: 4373 AHSAAITASGQ-VLTWGKGRYGRLGHGDS 4400



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL  A    +   A  C  +H   + SN   Y++G G+  RLGHG T    VP ++ AL 
Sbjct: 622 PLEEAGHETFISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALE 681

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  V+SV CG  ++  I   G  +  +G G Y +LG GN+  +  P
Sbjct: 682 QHCVQSVFCGCTYSAVITCGGN-LLTWGRGTYARLGHGNSDDRCLP 726



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 45/70 (64%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +  V ++ G +H LA++  G+V+AWG   D +LG GN+++Y  P+LV  L   ++  ++ 
Sbjct: 4311 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIAC 4370

Query: 75   GRSHSAAWTA 84
            G +HSAA TA
Sbjct: 4371 GSAHSAAITA 4380



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 407  LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            L Y    IACG     +  +T +  ++++G+GDYG+LG G +   K+P ++ +L  + V 
Sbjct: 4413 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVI 4472

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             V CG   +V +   G AVY +G G++ +LG G+
Sbjct: 4473 KVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGS 4505



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 41/67 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +  V +  G +H LA++  G+VF+WG   D +LG GN+    +P+ V AL  K IR V+ 
Sbjct: 3161 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVAC 3220

Query: 75   GRSHSAA 81
            G SHSAA
Sbjct: 3221 GSSHSAA 3227



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G ++++G+GD+G+LG G +     P  +  L+ + V  + CG  
Sbjct: 3270 VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQ 3329

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 3330 FSLALTRAGE-VWTWGKGDYYRLGHGGDQHVRKPQ 3363



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I D++ G+ H  A+S+ G+++ WG     +LG G+     +P+LV AL+ 
Sbjct: 3205 RQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAG 3264

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3265 RRVVQVACG 3273



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    + +G +YT+G+ D G+LG GT    + P  V AL   H+  V+CG  H
Sbjct: 4525 SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAH 4584

Query: 473  TVCIA 477
            T+ ++
Sbjct: 4585 TLALS 4589



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G G T   K P  V+ L+ V V  V+CG +H+
Sbjct: 3376 VAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDDVFVNRVACGSSHS 3435

Query: 474  V 474
            +
Sbjct: 3436 I 3436



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G  HS  +TS G ++ +G+GDYG+LG+G       P  V +L +  V+ +  G 
Sbjct: 739 DVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRIFAGS 796

Query: 471 NHTVCIADKGKAVYAFG 487
            ++V ++ +G+ VY +G
Sbjct: 797 QYSVALSSEGQ-VYTWG 812



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 36/76 (47%)

Query: 8    HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
             I     I ++ I  G +  LA++  G+V+ WG     +LG G   + R+PQ +  L  +
Sbjct: 3312 EIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR 3371

Query: 68   NIRQVSAGRSHSAAWT 83
             +  V+ G  H  A T
Sbjct: 3372 RVIHVAVGALHCLAVT 3387



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL---GLGNQINYREPQLVLA 63
           R + + ++  IVD++VG  H LA+S++G+VF WG N   Q+    + ++   R P LV A
Sbjct: 833 RLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQVCPSSVSSEPLLRSPILV-A 891

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L       ++     S  WT
Sbjct: 892 LPTLPASGIACTAGQSLIWT 911



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A     +VD+++G+   H LA+++ G VFAWG+    +LG GN     +P LV +L  
Sbjct: 729 VAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL-- 786

Query: 67  KNIRQVSAGRSHSAAWTA 84
             ++++ AG  +S A ++
Sbjct: 787 PRVQRIFAGSQYSVALSS 804



 Score = 41.6 bits (96), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +     + + DI+ G+ H  A++ +GQV  WG     +LG G+  +   P+LV AL    
Sbjct: 4357 VEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYR 4416

Query: 69   IRQVSAG 75
               ++ G
Sbjct: 4417 AIDIACG 4423


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 190/372 (51%), Gaps = 45/372 (12%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S++G+VF WG+N + QLG G     + P+LV +L  
Sbjct: 4212 KKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQG 4271

Query: 67   KNIRQVSAGRSHSAAWTAPPL-----PPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLP 121
            K+I +V  G +H+ A +   L     PP      PS  L   L +DI     H       
Sbjct: 4272 KHIVKVICGSAHTLALSTYQLSEAVRPP------PSPPLEYDLVRDIAPEVLH------- 4318

Query: 122  LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLV 181
               ARL LL+ FS+LI   + +LP+               L   +L+ +    +      
Sbjct: 4319 ---ARLVLLHHFSELICPGLAMLPISGE------------LSLGALKDILVYSIKEAGFR 4363

Query: 182  RSVGKTMLVGKNFGPSVTVRRLTTKSKQT-----------VKPIFAQISRQVVKMKGSDL 230
            + +  TM+  K  GP + + R+  K  +            +K +F Q+ +++  +    L
Sbjct: 4364 KVIQTTMVRDKPHGPVIELNRIQVKRSRMRSGNGLAGVDGMKSVFGQMVQKLPLLTQEAL 4423

Query: 231  RLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYI 290
             +P R WKVK +GE  DD GG F ++I EMC EL +G++PLL++TPNG  + G NRD ++
Sbjct: 4424 SMPHRVWKVKFVGESVDDCGGGFSESIAEMCDELQNGSIPLLIQTPNGRGEAGANRDCFL 4483

Query: 291  LNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTL 350
            L+P LS  L   M F+FLG+L G+A+RT  PL L L+  VW+ +  E +  +DL + D  
Sbjct: 4484 LDPTLSSVLHMNM-FRFLGVLMGIAVRTGSPLSLNLAEPVWRQLCGETLRPSDLTEVDRD 4542

Query: 351  YAQSLRAIRDIH 362
            Y   L  IRDI 
Sbjct: 4543 YITGLLYIRDIE 4554



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V AL    V  V+CG    
Sbjct: 3051 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDA 3110

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ ++G  V+++GDG++GKLG G +
Sbjct: 3111 QTLCLTEEG-LVFSWGDGDFGKLGRGGS 3137



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 5/126 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           GA   GR+    T  + VP   A  L+    AI  G  +SA V+S G L+T+G G YGRL
Sbjct: 604 GAGEGGRLGHGDTASKEVPTKIA--LEKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRL 661

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           GHG + +  VP +V AL    V  V+ G    H++ + D G  ++A+GDG++GKLG G+ 
Sbjct: 662 GHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTD-GGLLFAWGDGDFGKLGNGSC 720

Query: 500 GLKPTP 505
              P P
Sbjct: 721 NGSPLP 726



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 50/88 (56%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV+++GQVFAWG+N   Q G GN +  ++P LVL L    
Sbjct: 3198 IQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVF 3257

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTP 96
            + +V+ G SHS AW+ P  P       P
Sbjct: 3258 VNRVACGSSHSVAWSLPQNPSEKDKKEP 3285



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 18/164 (10%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRI----TPIVTGGQSVPL 401
            Y+  L  ++ IH+SG +++ F  I+  +     C EG +  GR+       V   + VP+
Sbjct: 2933 YSSVLSQLKPIHISGGSKSLF--IVSQDGKLYACGEGTN--GRLGLGHNNNVPTPRQVPI 2988

Query: 402  TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
               N+    + A+  G KH+  +T +G ++++G G+ G+LGHG  +  + P+ + +L   
Sbjct: 2989 L--NQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTK 3046

Query: 462  HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
             +  ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3047 RIRDIACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNCTQLKP 3089



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 4/108 (3%)

Query: 402  TFANRLQYY---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
            T    LQ+    + A+  G KH   ++S+G ++++G G+ G+LGHG   ++  P+ + AL
Sbjct: 4021 TLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEAL 4080

Query: 459  NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + + V  ++CG  H+ CI  +G  V  +G G YG+LG G++  +  P+
Sbjct: 4081 SGIGVVDIACGSAHSACITSQGH-VLTWGKGRYGRLGHGDSEDQLQPK 4127



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 1/84 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GDY RLGHG T + + P++V AL    + S++ G  H 
Sbjct: 4173 VECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHC 4232

Query: 474  VCIADKGKAVYAFGDGEYGKLGLG 497
            V  +D G+ V+ +GD + G+LG G
Sbjct: 4233 VACSDSGE-VFTWGDNDEGQLGDG 4255



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHGT  + + P  +  L    V  V+ G  H 
Sbjct: 3157 IECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHC 3216

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ V+A+GD ++G+ G GNT +   P
Sbjct: 3217 LAVTDSGQ-VFAWGDNDHGQQGSGNTVVNKKP 3247



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 34/119 (28%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV----------------- 456
            IACG  HSA +TS G++ T+G G YGRLGHG + +   P+R V                 
Sbjct: 4088 IACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMAS 4147

Query: 457  --------ALNKVHVES--------VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
                    A + + +ES        V CG   +V +   G +VY +G G+Y +LG GNT
Sbjct: 4148 LAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSG-SVYTWGKGDYHRLGHGNT 4205



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R +P      +  ++V  G +H +A++  G+VF+WG   D +LG GN++   +P+L+ +L
Sbjct: 2984 RQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESL 3043

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3044 RTKRIRDIACGSSHSAAITS 3063



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 59/95 (62%), Gaps = 3/95 (3%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A  C  +H+  ++S G +Y++G G+ GRLGHG T + +VP + +AL K  V ++  G 
Sbjct: 581 QIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTK-IALEK-QVTAIYAGA 638

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +++  ++  G+ ++ +G G YG+LG GN+  K  P
Sbjct: 639 SYSAAVSSVGE-LFTWGRGTYGRLGHGNSDDKFVP 672



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 5/96 (5%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    VP +V  LN V V  + CG  
Sbjct: 3103 VACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQ 3162

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKPTP 505
             ++ +   G+ V+ +G G+Y +LG G      KPTP
Sbjct: 3163 FSLALTKIGE-VWTWGKGDYYRLGHGTDQHVRKPTP 3197



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 45/70 (64%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+VF+WG   D +LG GN+ +Y  P+L+ ALS   +  ++ 
Sbjct: 4031 IKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIAC 4090

Query: 75   GRSHSAAWTA 84
            G +HSA  T+
Sbjct: 4091 GSAHSACITS 4100



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G  HS  VT  G L+ +G+GD+G+LG+G+     +P ++  ++   V  +  G 
Sbjct: 685 DVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSS--VARIYSGS 742

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +V ++  G  +Y++G G  G+LG GN+     P+
Sbjct: 743 QFSVALSYDG-TLYSWGKGHGGRLGHGNSEHSNVPK 777



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I  G + S  ++ +G LY++G G  GRLGHG + +  VP+ V AL    +  V+ G  
Sbjct: 736 ARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSA 795

Query: 472 HTVCIADKGKAVYAFGDGEYGKL 494
           H + +   G+ +Y +G  +Y ++
Sbjct: 796 HCLALTSSGE-LYGWGRNDYQQI 817



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G ++ +G+ D+G+ G G T+  K P  V+ L+ V V  V+CG +H+
Sbjct: 3209 VAVGALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHS 3268

Query: 474  V 474
            V
Sbjct: 3269 V 3269



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    + +G ++T+G+ D G+LG GT    + P  V +L   H+  V CG  H
Sbjct: 4224 SIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAH 4283

Query: 473  TVCIA 477
            T+ ++
Sbjct: 4284 TLALS 4288



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 38/67 (56%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            + + +   I DI+ G+ H  A++++G+++ WG     +LG G+     +P+LV AL    
Sbjct: 3040 LESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQGHR 3099

Query: 69   IRQVSAG 75
            + QV+ G
Sbjct: 3100 VVQVACG 3106



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 37/68 (54%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +  I  G++  +A+S  G +++WG     +LG GN  +   P+LV AL  K I  V+ G 
Sbjct: 735 VARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGS 794

Query: 77  SHSAAWTA 84
           +H  A T+
Sbjct: 795 AHCLALTS 802



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 27/39 (69%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
           + A +   IVD++VG+ H LA++++G+++ WG N   Q+
Sbjct: 779 VHALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQI 817



 Score = 38.9 bits (89), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 9   IPAFKNIHIVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   + + ++ I+   E  H +A+S+ G+V++WG     +LG G+  +   P  + AL  
Sbjct: 571 VEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKI-AL-E 628

Query: 67  KNIRQVSAGRSHSAA 81
           K +  + AG S+SAA
Sbjct: 629 KQVTAIYAGASYSAA 643


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 190/372 (51%), Gaps = 45/372 (12%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S++G+VF WG+N + QLG G     + P+LV +L  
Sbjct: 4226 KKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQG 4285

Query: 67   KNIRQVSAGRSHSAAWTAPPL-----PPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLP 121
            K+I +V  G +H+ A +   L     PP      PS  L   L +DI     H       
Sbjct: 4286 KHIVKVICGSAHTLALSTYQLSEAVRPP------PSPPLEYDLVRDISPEVLH------- 4332

Query: 122  LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLV 181
               ARL LL+ FS+L+   + +LP+               L   +L+ +    +      
Sbjct: 4333 ---ARLVLLHHFSELVCPCLAMLPISGE------------LSLGALKDILVYSIKEAGFR 4377

Query: 182  RSVGKTMLVGKNFGPSVTVRRLTTKSKQT-----------VKPIFAQISRQVVKMKGSDL 230
            + +  TM+  K  GP + + R+  K  +            +K +F Q+ +++  +    L
Sbjct: 4378 KVIQTTMVRDKPHGPVIELNRIQVKRSRMRSGNGLAGVDGMKSVFGQMVQKLPLLTQEAL 4437

Query: 231  RLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYI 290
             +P R WKVK +GE  DD GG F ++I EMC EL +G+VPLL++TPNG  + G NRD ++
Sbjct: 4438 SMPHRVWKVKFVGESVDDCGGGFSESIAEMCDELQNGSVPLLIQTPNGRGEAGANRDCFL 4497

Query: 291  LNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTL 350
            L+P L+  L   M F+FLG+L G+A+RT  PL L L+  VW+ +  E +  +DL + D  
Sbjct: 4498 LDPTLNSVLHMNM-FRFLGVLMGIAVRTGSPLSLNLAEPVWRQLCGEVLRPSDLTEVDRD 4556

Query: 351  YAQSLRAIRDIH 362
            Y   L  IRDI 
Sbjct: 4557 YITGLLYIRDIE 4568



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3036 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDA 3095

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ ++G  V+++GDG++GKLG G +
Sbjct: 3096 QTLCLTEEG-LVFSWGDGDFGKLGRGGS 3122



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 3/126 (2%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           GA   GR+    T  +  P       +     I CG  +SA +T  G L+T+G G YGRL
Sbjct: 593 GAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRL 652

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           GHG + +  VP +V AL    V  V+ G    H++C+ D G  ++A+GDG++GKLG G+ 
Sbjct: 653 GHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNG-LLFAWGDGDFGKLGNGSC 711

Query: 500 GLKPTP 505
              P P
Sbjct: 712 NGSPIP 717



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS G++ T+G G YGRLGHG + +   P+ V AL       ++CG    
Sbjct: 4081 IACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDA 4140

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+CI D    V+++GDG+YGKLG G +
Sbjct: 4141 QTLCITDDDN-VWSWGDGDYGKLGRGGS 4167



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 50/88 (56%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV+++GQV+AWG+N   Q G GN +  ++P LVL L    
Sbjct: 3183 IQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVF 3242

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTP 96
            + +V+ G SHS AW+ P  P       P
Sbjct: 3243 VNRVACGSSHSVAWSLPQNPSEKDKKEP 3270



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 18/164 (10%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRI----TPIVTGGQSVPL 401
            Y+  L  ++ IH++G +++ F  I+  +     C EG +  GR+       V   + VP+
Sbjct: 2918 YSSVLSQLKPIHIAGGSKSLF--IVSQDGKLYACGEGTN--GRLGLGHNNNVPTPRQVPI 2973

Query: 402  TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
               N+    + A+  G KH+  +T +G ++++G G+ G+LGHG  +  + P+ + +L   
Sbjct: 2974 L--NQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTK 3031

Query: 462  HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
             V  ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3032 RVRDIACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNCTQLKP 3074



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 1/104 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  +P+   +        + CG + S  +T +G +YT+G GDY RLGHG T + + P+
Sbjct: 4167 SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPK 4226

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +V AL    + S++ G  H V  +D G+ V+ +GD + G+LG G
Sbjct: 4227 KVAALQGKKIISIATGSLHCVACSDSGE-VFTWGDNDEGQLGDG 4269



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 4/108 (3%)

Query: 402  TFANRLQYY---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
            T    LQ+    + A+  G KH   ++S+G ++++G G+ G+LGHG   ++  P+ + AL
Sbjct: 4014 TLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEAL 4073

Query: 459  NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + + V  ++CG  H+ CI  +G  V  +G G YG+LG G++  +  P+
Sbjct: 4074 SGIGVIDIACGSAHSACITSQGH-VLTWGKGRYGRLGHGDSEDQLQPK 4120



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT  + + P  +  L    V  V+ G  H 
Sbjct: 3142 IECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHC 3201

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 3202 LAVTDSGQ-VYAWGDNDHGQQGSGNTVVNKKP 3232



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 1/95 (1%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A  C  KH  V++S   ++++G GD GRLGHG T++ + P  +V L++  V  + CG 
Sbjct: 570 QIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGA 629

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +++  I   G+ ++ +G G YG+LG GN+  K  P
Sbjct: 630 SYSAAITIAGE-LFTWGRGTYGRLGHGNSDDKLVP 663



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 407  LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            L Y    IACG     +  +T +  ++++G+GDYG+LG G +   K+P ++ +L  + V 
Sbjct: 4126 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVI 4185

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             V CG   +V +   G +VY +G G+Y +LG GNT
Sbjct: 4186 KVECGSQFSVALTRSG-SVYTWGKGDYHRLGHGNT 4219



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 5/96 (5%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    VP +V  LN V V  + CG  
Sbjct: 3088 VACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQ 3147

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKPTP 505
             ++ +   G+ V+ +G G+Y +LG G      KPTP
Sbjct: 3148 FSLALTKSGE-VWTWGKGDYYRLGHGTDQHVRKPTP 3182



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R +P      +  ++V  G +H +A++  G+VF+WG   D +LG GN++   +P+L+ +L
Sbjct: 2969 RQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESL 3028

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K +R ++ G SHSAA T+
Sbjct: 3029 RTKRVRDIACGSSHSAAITS 3048



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 45/70 (64%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+VF+WG   D +LG GN+ +Y  P+L+ ALS   +  ++ 
Sbjct: 4024 IKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIAC 4083

Query: 75   GRSHSAAWTA 84
            G +HSA  T+
Sbjct: 4084 GSAHSACITS 4093



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G  HS  VT NG L+ +G+GD+G+LG+G+     +P ++  L  V+V  +  G 
Sbjct: 676 DVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTL--VNVSRIYSGS 733

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +V ++  G  +Y +G G  G+LG GN+     P+
Sbjct: 734 QFSVALSCDG-TLYTWGKGHGGRLGHGNSEHSNVPK 768



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I  G + S  ++ +G LYT+G G  GRLGHG + +  VP+ V AL    +  V+ G  H 
Sbjct: 729 IYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHC 788

Query: 474 VCIADKGKAVYAFGDGEYGKL 494
           + +   G+ +Y +G  +Y ++
Sbjct: 789 LALTSSGE-LYGWGRNDYQQI 808



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G G T+  K P  V+ L+ V V  V+CG +H+
Sbjct: 3194 VAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHS 3253

Query: 474  V 474
            V
Sbjct: 3254 V 3254



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           +     + +H+V I+   E  HV+ +S+  +V++WG     +LG G+ ++   P +++ L
Sbjct: 558 KAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGL 617

Query: 65  SNKNIRQVSAGRSHSAAWT 83
             K +  +  G S+SAA T
Sbjct: 618 HEKQVCGIYCGASYSAAIT 636



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    + +G ++T+G+ D G+LG GT    + P  V +L   H+  V CG  H
Sbjct: 4238 SIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAH 4297

Query: 473  TVCIA 477
            T+ ++
Sbjct: 4298 TLALS 4302



 Score = 45.1 bits (105), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 37/67 (55%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I + +   + DI+ G+ H  A++++G+++ WG     +LG G+     +P+LV  L    
Sbjct: 3025 IESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHR 3084

Query: 69   IRQVSAG 75
            + QV+ G
Sbjct: 3085 VVQVACG 3091



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           +++  I  G++  +A+S  G ++ WG     +LG GN  +   P+LV AL  K I  V+ 
Sbjct: 724 VNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAV 783

Query: 75  GRSHSAAWTA 84
           G +H  A T+
Sbjct: 784 GSAHCLALTS 793



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            I A   I ++DI+ G+ H   +++ G V  WG     +LG G+  +  +P+LV AL
Sbjct: 4070 IEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEAL 4125


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 216/425 (50%), Gaps = 47/425 (11%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + A +   I+ I+ G+ H +A S++G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 169 KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQG 228

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
           K+I +V+ G +H+ A +   L           S RL    + P  Y  +++     + AR
Sbjct: 229 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDLAPEALHAR 277

Query: 127 LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
           L LL+ FS+L+   + +LP+               L   +L+ +    +      + +  
Sbjct: 278 LILLHHFSELVCPCLAMLPISGD------------LSLGALKDVLVCNIKEAAFRKVIQT 325

Query: 187 TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
           TM+  K  GP + + R+  K  +           +K +F Q+ +++  +    L LP R 
Sbjct: 326 TMVRDKQHGPVIELNRIQVKRSRNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHRV 385

Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
           WKVK +GE  DD GG + ++  EMC EL +G+VPLL+ TPNG  + G NRD ++L+P LS
Sbjct: 386 WKVKFVGESVDDCGGGYSESTAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLS 445

Query: 297 ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
             LQ  M F+FLG+L G+A+RT  PL + L+  VW+ ++ E +  TDL + D  Y   L 
Sbjct: 446 SVLQMNM-FRFLGVLMGIAVRTGSPLSINLAEPVWRQLMGEVLRPTDLTEVDRDYVAGLL 504

Query: 357 AIRDIHLSGVTEANFPEII-PLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IR++        + P++   LE  F  +S  G   P+ T  +   ++  NR +Y   A+
Sbjct: 505 CIRNMD-------DDPKLFTALELPFSTSSARGHEVPLST--RYTHISPRNRAEYVRLAL 555

Query: 415 ACGFK 419
             GF+
Sbjct: 556 --GFR 558



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 3/90 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IACG  HSA +T++G++ T+G G YGRLGHG + +   P+ V AL       ++CG  
Sbjct: 22  ADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSG 81

Query: 472 --HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
              T+CI D    V+++GDG+YGKLG G +
Sbjct: 82  DAQTLCITDDDN-VWSWGDGDYGKLGRGGS 110



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +YT+G GD+ RLGHG+  + + P++V AL    + S++ G  H 
Sbjct: 130 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 189

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           V  +D G+ VY +GD + G+LG G 
Sbjct: 190 VACSDSGE-VYTWGDNDEGQLGDGT 213



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 3/119 (2%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYG 439
           G    GR+    +  Q  P      L Y    IACG     +  +T +  ++++G+GDYG
Sbjct: 44  GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 103

Query: 440 RLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           +LG G +   K+P ++ +L  + V  V CG   +V +   G AVY +G G++ +LG G+
Sbjct: 104 KLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGS 161



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IA G  H    + +G +YT+G+ D G+LG GT    + P  V AL   H+  V+CG  H
Sbjct: 181 SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIVKVTCGSAH 240

Query: 473 TVCIA 477
           T+ ++
Sbjct: 241 TLALS 245



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 443 HGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           HG  M++  P+ V  LN + V  ++CG  H+  I   G  V  +G G YG+LG G++  +
Sbjct: 1   HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGH-VLTWGKGRYGRLGHGDSEDQ 59

Query: 503 PTPQ 506
             P+
Sbjct: 60  LRPK 63



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 35/75 (46%)

Query: 1  MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
          MS    + +     + + DI+ G+ H  A++ +G V  WG     +LG G+  +   P+L
Sbjct: 5  MSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKL 64

Query: 61 VLALSNKNIRQVSAG 75
          V AL       ++ G
Sbjct: 65 VEALLGYRAIDIACG 79


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 211/419 (50%), Gaps = 41/419 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S++G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4525 KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQG 4584

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K+I +V+ G +H+ A +   L           S RL    + P  Y  +++     + AR
Sbjct: 4585 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDLAPEALHAR 4633

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ FS+L+   + +LP+               L   +L+ +    +      + +  
Sbjct: 4634 LILLHHFSELLCPCLAMLPIAGD------------LSLGALKDVLVYNIKEAAFRKVIQT 4681

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  K  GP + + R+  K  ++          +K +F Q+ +++  +    L LP R 
Sbjct: 4682 TMVRDKQHGPVIELNRIQVKRSRSRCNGLAGVDGMKSVFGQMVQKLPLLTQEALALPHRV 4741

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G+VPLL+ TPNG  + G NRD ++L+P L 
Sbjct: 4742 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLG 4801

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              LQ  M F+FLG+L G+A+RT  PL + L+  VW+ +  E +   DL + D  Y   L 
Sbjct: 4802 SVLQMNM-FRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPPDLTEVDRDYVAGLL 4860

Query: 357  AIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIA 415
             IR++      +A     + L  F  +S  G   P+ T  +   ++  NR +Y   A++
Sbjct: 4861 CIRNMD----DDAKLFNTLELP-FSTSSARGHEVPLST--RYTHISPRNRAEYVRLALS 4912



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +ACG  HSA ++S G LYT+G G+YGRLGHG       P+ V AL    V  V+CG    
Sbjct: 3239 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDA 3298

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + + G AV+++GDG++GKLG G +    TP 
Sbjct: 3299 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPH 3332



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN- 471
           A+ CG  +SA +T +G LYT+G G Y RLGHG + +  +P  V+AL +  +  V+ G   
Sbjct: 675 AVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGD 734

Query: 472 -HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H++C+  +G  VYA+GD +YGKLG GN
Sbjct: 735 AHSLCLTSEGH-VYAWGDADYGKLGNGN 761



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 15/118 (12%)

Query: 396  GQSVPLTFANRLQYYE------------AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH 443
            G+   L   NR+ Y              A IACG  HSA +T++G++ T+G G YGRLGH
Sbjct: 4350 GEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 4409

Query: 444  GTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            G + +   P+ V AL       ++CG     T+CI D    V+++GDG+YGKLG G +
Sbjct: 4410 GDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDN-VWSWGDGDYGKLGRGGS 4466



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 15/190 (7%)

Query: 324  LPLSPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIP-----L 377
            LP + +VW L  +E +      +     ++Q++  +R IH++G +++ F  I+       
Sbjct: 3093 LPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLF--IVGQNGKVY 3150

Query: 378  ECFEGASWTGRITPIVTGGQSVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGN 435
             C EG +  GR+   VT    +P       QY   + A+  G KH+  +T +G ++++G 
Sbjct: 3151 ACGEGTN--GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGE 3208

Query: 436  GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            G+ G+LGHG       P  V  L    +  V+CG +H+  I+ +G+ +Y +G GEYG+LG
Sbjct: 3209 GEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGE-LYTWGLGEYGRLG 3267

Query: 496  LGN--TGLKP 503
             G+  T LKP
Sbjct: 3268 HGDNSTQLKP 3277



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 1/96 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   +T+ G +Y +G G+ G+LGHG  M++  P+ V  LN ++V  ++CG 
Sbjct: 4325 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGS 4384

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H+  I   G  V  +G G YG+LG G++  +  PQ
Sbjct: 4385 AHSAAITASGH-VLTWGKGRYGRLGHGDSEDQLRPQ 4419



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GD+ RLGHG+  + + P++V AL    + S++ G  H 
Sbjct: 4486 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4545

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
            V  +D G+ VY +GD + G+LG G 
Sbjct: 4546 VACSDSGE-VYTWGDNDEGQLGDGT 4569



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P+ +  L    V  V+ G  H 
Sbjct: 3345 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHC 3404

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 3405 LAVTDAGQ-VYAWGDNDHGQQGSGNTFVNKKP 3435



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV++ GQV+AWG+N   Q G GN    ++P LV+ L    
Sbjct: 3386 IAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF 3445

Query: 69   IRQVSAGRSHSAAWTAP 85
            + +V+ G SHS AW  P
Sbjct: 3446 VNRVACGSSHSIAWGLP 3462



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 45/67 (67%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V ++ G +H LA++  G+V+AWG   D +LG GN+++Y  P+LV  L+  N+  ++ G +
Sbjct: 4326 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSA 4385

Query: 78   HSAAWTA 84
            HSAA TA
Sbjct: 4386 HSAAITA 4392



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A  C  +H   +  N   Y++GNG+  RLGHG T    VP ++  L++  V++V CG ++
Sbjct: 624 ASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKITLLDRC-VKAVFCGCSY 682

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  I   G  +Y +G G Y +LG GN+  +P P
Sbjct: 683 SAAITCSGN-LYTWGRGTYARLGHGNSDDQPLP 714



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 41/64 (64%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V +  G +H LA++  G+VF+WG   D +LG GN+    +P+LV  L +K IR V+ G S
Sbjct: 3185 VAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSS 3244

Query: 78   HSAA 81
            HSAA
Sbjct: 3245 HSAA 3248



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 3/114 (2%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHG 444
            GR+    +  Q  P      L Y    IACG     +  +  +  ++++G+GDYG+LG G
Sbjct: 4405 GRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRG 4464

Query: 445  TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +   K+P ++ +L  + V  V CG   +V +   G AVY +G G++ +LG G+
Sbjct: 4465 GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGS 4517



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G ++++G+GD+G+LG G +     P  +  L+ + V  + CG  
Sbjct: 3291 VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQ 3350

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 3351 FSLALTRAGE-VWTWGKGDYYRLGHGGDQHVRKPQ 3384



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    + +G +YT+G+ D G+LG GT    + P  V AL   H+  V+CG  H
Sbjct: 4537 SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 4596

Query: 473  TVCIA 477
            T+ ++
Sbjct: 4597 TLALS 4601



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G G T   K P  V+ L+ V V  V+CG +H+
Sbjct: 3397 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 3456

Query: 474  V 474
            +
Sbjct: 3457 I 3457



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 40/69 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   ++  I D++ G+ H  A+S+ G+++ WG     +LG G+     +P+LV AL+ 
Sbjct: 3226 RLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPKLVAALAG 3285

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3286 RRVIQVACG 3294



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL---GLGNQINYREPQLVLA 63
           R I   ++  IVD++VG  H LA+S+ G+VF WG N   Q+    + ++   R P LV A
Sbjct: 821 RLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQICPSSVSSEPLLRVPILV-A 879

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L       V+   S S  WT
Sbjct: 880 LPTLPASGVACTASQSLIWT 899



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 36/76 (47%)

Query: 8    HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
             I     I ++ I  G +  LA++  G+V+ WG     +LG G   + R+PQ +  L  +
Sbjct: 3333 EIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGR 3392

Query: 68   NIRQVSAGRSHSAAWT 83
             +  V+ G  H  A T
Sbjct: 3393 RVIHVAVGALHCLAVT 3408



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           +  + A+  G  HS  +TS G++Y +G+ DYG+LG+G       P  V +L K  V+ V 
Sbjct: 724 EIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPK--VQRVF 781

Query: 468 CGLNHTVCIADKGKAVYAFG 487
            G   ++ +   G+ +Y++G
Sbjct: 782 AGAQFSMALTTDGQ-LYSWG 800



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 36/75 (48%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            MS    + +     +++ DI+ G+ H  A++ +G V  WG     +LG G+  +   PQL
Sbjct: 4361 MSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQL 4420

Query: 61   VLALSNKNIRQVSAG 75
            V AL       ++ G
Sbjct: 4421 VEALLGYRAIDIACG 4435



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A     I+D+++G+   H L +++ G V+AWG+    +LG GN      P LV +L  
Sbjct: 717 VMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESL-- 774

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V AG   S A T
Sbjct: 775 PKVQRVFAGAQFSMALT 791


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 211/419 (50%), Gaps = 41/419 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S++G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 3266 KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQG 3325

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K+I +V+ G +H+ A +   L           S RL    + P  Y  +++     + AR
Sbjct: 3326 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDLAPEALHAR 3374

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ FS+L+   + +LP+               L   +L+ +    +      + +  
Sbjct: 3375 LILLHHFSELLCPCLAMLPIAGD------------LSLGALKDVLVYNIKEAAFRKVIQT 3422

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  K  GP + + R+  K  ++          +K +F Q+ +++  +    L LP R 
Sbjct: 3423 TMVRDKQHGPVIELNRIQVKRSRSRCNGLAGVDGMKSVFGQMVQKLPLLTQEALALPHRV 3482

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G+VPLL+ TPNG  + G NRD ++L+P L 
Sbjct: 3483 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLG 3542

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              LQ  M F+FLG+L G+A+RT  PL + L+  VW+ +  E +   DL + D  Y   L 
Sbjct: 3543 SVLQMNM-FRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPPDLTEVDRDYVAGLL 3601

Query: 357  AIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIA 415
             IR++      +A     + L  F  +S  G   P+ T  +   ++  NR +Y   A++
Sbjct: 3602 CIRNMD----DDAKLFNTLELP-FSTSSARGHEVPLST--RYTHISPRNRAEYVRLALS 3653



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 15/118 (12%)

Query: 396  GQSVPLTFANRLQYYE------------AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH 443
            G+   L   NR+ Y              A IACG  HSA +T++G++ T+G G YGRLGH
Sbjct: 3091 GEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 3150

Query: 444  GTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            G + +   P+ V AL       ++CG     T+CI D    V+++GDG+YGKLG G +
Sbjct: 3151 GDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDN-VWSWGDGDYGKLGRGGS 3207



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +ACG  HSA ++S G LYT+G G+YGRLGHG       P+ V AL    V  V+CG    
Sbjct: 1976 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDA 2035

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + + G +V+++GDG++GKLG G +    TP 
Sbjct: 2036 QTLALTEDG-SVFSWGDGDFGKLGRGGSEGSDTPH 2069



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 15/190 (7%)

Query: 324  LPLSPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIP-----L 377
            LP + +VW L  +E +      +     ++Q++  +R IH++G +++ F  I+       
Sbjct: 1830 LPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLF--IVGQNGKVY 1887

Query: 378  ECFEGASWTGRITPIVTGGQSVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGN 435
             C EG +  GR+   VT    +P       QY   + A+  G KH+  +T +G ++++G 
Sbjct: 1888 ACGEGTN--GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGE 1945

Query: 436  GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            G+ G+LGHG       P  V  L    +  V+CG +H+  I+ +G+ +Y +G GEYG+LG
Sbjct: 1946 GEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGE-LYTWGLGEYGRLG 2004

Query: 496  LGN--TGLKP 503
             G+  T LKP
Sbjct: 2005 HGDNATQLKP 2014



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 1/96 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   +T+ G +Y +G G+ G+LGHG  M++  P+ V  LN ++V  ++CG 
Sbjct: 3066 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGS 3125

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H+  I   G  V  +G G YG+LG G++  +  PQ
Sbjct: 3126 AHSAAITASGH-VLTWGKGRYGRLGHGDSEDQLRPQ 3160



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P+ +  L    V  V+ G  H 
Sbjct: 2082 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHC 2141

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 2142 LAVTDAGQ-VYAWGDNDHGQQGSGNTFVNKKP 2172



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+  GD+ RLGHG+  + + P++V AL    + S++ G  H 
Sbjct: 3227 VECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 3286

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
            V  +D G+ VY +GD + G+LG G 
Sbjct: 3287 VACSDSGE-VYTWGDNDEGQLGDGT 3310



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV++ GQV+AWG+N   Q G GN    ++P LV+ L    
Sbjct: 2123 IGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF 2182

Query: 69   IRQVSAGRSHSAAWTAP 85
            + +V+ G SHS AW  P
Sbjct: 2183 VNRVACGSSHSIAWGLP 2199



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 45/67 (67%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V ++ G +H LA++  G+V+AWG   D +LG GN+++Y  P+LV  L+  N+  ++ G +
Sbjct: 3067 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSA 3126

Query: 78   HSAAWTA 84
            HSAA TA
Sbjct: 3127 HSAAITA 3133



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 41/64 (64%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V +  G +H LA++  G+VF+WG   D +LG GN+    +P+LV  L +K IR V+ G S
Sbjct: 1922 VAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSS 1981

Query: 78   HSAA 81
            HSAA
Sbjct: 1982 HSAA 1985



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 3/114 (2%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHG 444
            GR+    +  Q  P      L Y    IACG     +  +T +  ++++G+GDYG+LG G
Sbjct: 3146 GRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 3205

Query: 445  TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +   K+P ++ +L  + V  V CG   +V +   G AVY +  G++ +LG G+
Sbjct: 3206 GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSG-AVYTWSKGDFHRLGHGS 3258



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G ++++G+GD+G+LG G +     P  +  L+ + V  + CG  
Sbjct: 2028 VACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQ 2087

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 2088 FSLALTRAGE-VWTWGKGDYYRLGHGGDQHVRKPQ 2121



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    + +G +YT+G+ D G+LG GT    + P  V AL   H+  V+CG  H
Sbjct: 3278 SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 3337

Query: 473  TVCIA 477
            T+ ++
Sbjct: 3338 TLALS 3342



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G G T   K P  V+ L+ V V  V+CG +H+
Sbjct: 2134 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 2193

Query: 474  V 474
            +
Sbjct: 2194 I 2194



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 40/69 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   ++  I D++ G+ H  A+S+ G+++ WG     +LG G+     +P+LV AL+ 
Sbjct: 1963 RLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAG 2022

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 2023 RRVIQVACG 2031



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 36/76 (47%)

Query: 8    HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
             I     I ++ I  G +  LA++  G+V+ WG     +LG G   + R+PQ +  L  +
Sbjct: 2070 EIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR 2129

Query: 68   NIRQVSAGRSHSAAWT 83
             +  V+ G  H  A T
Sbjct: 2130 RVIHVAVGALHCLAVT 2145



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 36/75 (48%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            MS    + +     +++ DI+ G+ H  A++ +G V  WG     +LG G+  +   PQL
Sbjct: 3102 MSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQL 3161

Query: 61   VLALSNKNIRQVSAG 75
            V AL       ++ G
Sbjct: 3162 VEALLGYRAIDIACG 3176


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 207/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4245 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4304

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            PSS+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4305 KKVNRVACGSAHTLAWSTS---------KPSSAGKL--PAQVPMEYNHLQEIPIIALRNR 4353

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +   +   + V 
Sbjct: 4354 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEVAFRKVVQ 4409

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4410 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4469

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ NP   
Sbjct: 4470 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFNPAAK 4529

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4530 ALVHSSM-FRFLGVLLGIAIRTGSPLSLSLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4588

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4589 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 4639



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3107 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3166

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3167 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3200



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 40/222 (18%)

Query: 301  SLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTL---------- 350
            SL+  K  G+    A+RTK          VW            L D D L          
Sbjct: 2945 SLIRKKSAGLESSAAVRTK--------VFVW-----------GLNDKDQLGGLKGSKIKV 2985

Query: 351  --YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TF 403
              ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T 
Sbjct: 2986 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSG-TVPIPRQITA 3044

Query: 404  ANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
             +     + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +
Sbjct: 3045 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRI 3104

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
              ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3105 RDIACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3145



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V  L    V  V+CG    
Sbjct: 4100 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDA 4159

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4160 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4186



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4186 SDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4245

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4246 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4297



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3254 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3313

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3314 ITRVACGSSHSVAWT 3328



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3213 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3272

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3273 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3303



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   +V +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4152 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQ 4211

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4212 FSVALTKSG-AVYTWGKGDYHRLGHGS 4237



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG+      P  V +L  + V  V+ G 
Sbjct: 4045 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGG 4104

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4105 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4138



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3040 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3099

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3100 RAKRIRDIACGSSHSAALTS 3119



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3159 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3218

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3219 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3252



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G ++++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4257 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4316

Query: 473  TV 474
            T+
Sbjct: 4317 TL 4318



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG G++     P++V +L    +  V+A
Sbjct: 4043 IRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAA 4102

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4103 GGAHSACVTA 4112



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 405 NRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            +LQ  E   + CG + S  +T +G +Y++G GD  RLGHGT  + + P  +  L+   V
Sbjct: 653 EKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKV 712

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGE 490
             V+ G  H + + +  + V+++G  +
Sbjct: 713 IDVAAGSTHCLALTEDSE-VHSWGSND 738



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+VF+WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3192 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3249

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3250 KPQVVEGLRGKKIVHVAVGALHCLAVT 3276



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3265 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3324

Query: 474  V 474
            V
Sbjct: 3325 V 3325



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
             + +V  G   S A T
Sbjct: 658 LEVVKVRCGSQFSVALT 674



 Score = 45.4 bits (106), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A +   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3088 MNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3147

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3148 VKVLLGHRVIQVACG 3162



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 40/78 (51%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +       ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  
Sbjct: 702 RLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDT 761

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K+I  ++ G + S AW++
Sbjct: 762 KHIVGIACGPAQSFAWSS 779



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 34/69 (49%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV  L  
Sbjct: 4087 RVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQG 4146

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 4147 HRVVDVACG 4155


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/420 (32%), Positives = 204/420 (48%), Gaps = 37/420 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4113 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4172

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4173 KKINRVACGSAHTLAWSTSK--PANAGK---------LPTQVPMEYNHLQEIPIISLRNR 4221

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLV-HPSLRPLFAPRVYTLPLVRSV 184
            L LL+  S+L    + +  L G +D+     T +   V   +LR +   +       + V
Sbjct: 4222 LLLLHHISELFCPCIPMFDLEGRLDE-----TGHGPSVGFDTLRGILISQGKEAAFRKVV 4276

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSR 235
              TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R
Sbjct: 4277 QATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHR 4336

Query: 236  AWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDL 295
             WKVK +GE  DD GG + ++I EMC EL +G  PLL+ TPNG  ++G NRD ++LNP  
Sbjct: 4337 VWKVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTPNGRDESGANRDCFLLNPAA 4396

Query: 296  SESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSL 355
              SL + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L
Sbjct: 4397 KSSLHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGL 4455

Query: 356  RAIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
              IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4456 MYIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 4507



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  VSCG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3105 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3165 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3198



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2986 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3044

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3045 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3105 IACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3143



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4054 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4113

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4114 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4165



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3312 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3358



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT ++ + P+ V  L    +  V+ G  H 
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHC 3270

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3271 LAVTDTGQ-VYAWGDNDHGQQGNGTTTVNRKP 3301



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H +A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3038 RQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3097

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3098 KTKRIRDIACGSSHSAAITS 3117



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPL--TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q++P+  T    L+  + +   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ +  L  + V  V CG   +V +   G+ VY++G G+  +LG G
Sbjct: 642 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ-VYSWGKGDNQRLGHG 693



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 409  YYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y    IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4074

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             CG   +V +   G AVY +G G+Y +LG G+
Sbjct: 4075 ECGSQFSVALTKSG-AVYTWGKGDYHRLGHGS 4105



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G ++++G GD GRLGHG T+  + P+ + AL+      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDQTIP 595



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 3/86 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3157 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLG 497
             ++ +   G  V+ +G G+Y +LG G
Sbjct: 3217 FSLALTKSG-VVWTWGKGDYFRLGHG 3241



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VVDVAAGSTHCLALT 726



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4125 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4184

Query: 473  TV 474
            T+
Sbjct: 4185 TL 4186



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+VF+WG     +LG G+ +   EP+++ ALS     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D+S G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVVKVRCGSQFSVALT 674



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G  ++ R
Sbjct: 3190 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 3247

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVT 3274



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3146 VKVLLGHRVIQVACG 3160



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3263 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 474  V 474
            V
Sbjct: 3323 V 3323



 Score = 45.4 bits (106), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   +VD++ G+ H LA++   +V +WG+N   Q     +I   EP  +  L  K+
Sbjct: 704 LEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPTALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H+V I+ G+ +  A++  G+++ WG  +  +LG G+  +   P LV  L    +  VS G
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 205/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4500 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4559

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4560 KKVNRVACGSAHTLAWST---------SKPASAGKL--PAQVPMEYNHLQEIPILALRNR 4608

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4609 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4664

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4665 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4724

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ NP   
Sbjct: 4725 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFNPGAR 4784

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4785 APVHSSM-FRFLGVLLGIAIRTGSPLSLSLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4843

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR  Y   AI
Sbjct: 4844 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRADYVRLAI 4894



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 817 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 876

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 877 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 910



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3365 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3424

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3425 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3458



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 3246 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSG-TVPIPRQVTALS 3304

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3305 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3364

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3365 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3403



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 3/90 (3%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            A +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG  
Sbjct: 4353 ADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 4412

Query: 472  --HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
               T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4413 DAQTLCLTDD-DTVWSWGDGDYGKLGRGGS 4441



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4441 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4500

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4501 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4552



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3512 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQK 3571

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3572 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3618



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3471 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3530

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3531 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3561



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 842 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 901

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 902 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 954



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4407 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4466

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4467 FSVALTKSG-AVYTWGKGDYHRLGHGS 4492



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4300 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGG 4359

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4360 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4393



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R + A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3298 RQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3357

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3358 KTKRIRDIACGSSHSAALTS 3377



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3417 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3476

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G  V+ +G G+Y +LG G+
Sbjct: 3477 FSLALTKSG-VVWTWGKGDYFRLGHGS 3502



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ +   +      HV  ++CG  ++  
Sbjct: 767 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAA 826

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 827 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 855



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4298 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAA 4357

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4358 GGAHSACVTA 4367



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 912 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 971

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 972 VIDVAAGSTHCLALT 986



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4512 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4571

Query: 473  TV 474
            T+
Sbjct: 4572 TL 4573



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 923 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 982

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 983 LALTEDSE-VHSWGSND 998



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3450 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3507

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3508 KPQVVEGLRGKKIVHVAVGALHCLAVT 3534



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3346 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3405

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3406 VKVLLGHRVIQVACG 3420



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 858 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 917

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 918 LDVVKVRCGSQFSIALT 934



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3523 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHS 3582

Query: 474  V 474
            V
Sbjct: 3583 V 3583



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++   S     
Sbjct: 752 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAG 811

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 812 KHVVHIACGSTYSAAITA 829



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 964  LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKH 1023

Query: 69   IRQVSAGRSHSAAWTA 84
            I  ++ G + S AW++
Sbjct: 1024 IVGIACGPAQSFAWSS 1039



 Score = 42.4 bits (98), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 34/69 (49%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I + D++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4342 RVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4401

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4402 HRVVDIACG 4410


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 206/419 (49%), Gaps = 35/419 (8%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 512 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 571

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
           K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 572 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 620

Query: 127 LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
           L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 621 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 676

Query: 186 KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 677 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 736

Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
           WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 737 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 796

Query: 297 ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
             +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 797 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 855

Query: 357 AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 856 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 906



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 367 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDA 426

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            T+C+ D    V+++GDG+YGKLG G +
Sbjct: 427 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 453



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 1/111 (0%)

Query: 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P +V
Sbjct: 455 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 514

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 515 QGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 564



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 419 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 478

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +V +   G AVY +G G+Y +LG G+
Sbjct: 479 FSVALTKSG-AVYTWGKGDYHRLGHGS 504



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 312 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 371

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H+ C+   G  +Y +G G YG+LG  ++  +  P+
Sbjct: 372 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKPK 406



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 310 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 369

Query: 75  GRSHSAAWTA 84
           G +HSA  TA
Sbjct: 370 GGAHSACVTA 379



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 524 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 583

Query: 473 TV 474
           T+
Sbjct: 584 TL 585



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 354 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 413

Query: 67  KNIRQVSAG 75
             +  ++ G
Sbjct: 414 HRVIDIACG 422


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 206/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 1278 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 1337

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 1338 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 1386

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 1387 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 1442

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 1443 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 1502

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 1503 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 1562

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 1563 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 1621

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 1622 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 1672



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 140 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 199

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 200 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 233



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351 YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
           ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 21  FSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSG-TVPIPRQITALS 79

Query: 406 RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 80  SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 139

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
           ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 140 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 178



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 1133 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDA 1192

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 1193 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 1219



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 1/111 (0%)

Query: 396  GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
            G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P +V
Sbjct: 1221 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 1280

Query: 456  VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 1281 QGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 1330



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 287 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 346

Query: 69  IRQVSAGRSHSAAWT 83
           I +V+ G SHS AWT
Sbjct: 347 ITRVACGSSHSVAWT 361



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 246 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 305

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 306 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 336



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 1185 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 1244

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 1245 FSVALTKSG-AVYTWGKGDYHRLGHGS 1270



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 73  RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 132

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
             K IR ++ G SHSAA T+
Sbjct: 133 KTKRIRDIACGSSHSAALTS 152



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G    G+LGHG       P  + +L  + V  V+ G 
Sbjct: 1078 KVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 1137

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 1138 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 1171



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414 IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 192 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 251

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 252 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 285



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 1076 IKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 1135

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 1136 GGAHSACVTA 1145



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 1290 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 1349

Query: 473  TV 474
            T+
Sbjct: 1350 TL 1351



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3   GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 225 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 282

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
           +PQ+V  L  K I  V+ G  H  A T
Sbjct: 283 KPQVVEGLRGKKIVHVAVGALHCLAVT 309



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++V  L  
Sbjct: 127 RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG 186

Query: 67  KNIRQVSAG 75
             + QV+ G
Sbjct: 187 HRVIQVACG 195



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 298 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 357

Query: 474 V 474
           V
Sbjct: 358 V 358



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 1120 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 1179

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 1180 HRVIDIACG 1188


>gi|74183965|dbj|BAE37031.1| unnamed protein product [Mus musculus]
          Length = 714

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 206/419 (49%), Gaps = 35/419 (8%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 121 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 180

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
           K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 181 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 229

Query: 127 LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
           L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 230 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 285

Query: 186 KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 286 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 345

Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
           WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 346 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 405

Query: 297 ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
             +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 406 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 464

Query: 357 AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 465 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 515



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 62  SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 121

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 122 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 173



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 28  IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 87

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +V +   G AVY +G G+Y +LG G+
Sbjct: 88  FSVALTKSG-AVYTWGKGDYHRLGHGS 113



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 133 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 192

Query: 473 TV 474
           T+
Sbjct: 193 TL 194



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)

Query: 439 GRLGHGTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGL 496
           GRLGH  + +   P+ V AL    V  ++CG     T+C+ D    V+++GDG+YGKLG 
Sbjct: 1   GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVWSWGDGDYGKLGR 59

Query: 497 GNT 499
           G +
Sbjct: 60  GGS 62


>gi|74201803|dbj|BAE28504.1| unnamed protein product [Mus musculus]
          Length = 681

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 206/419 (49%), Gaps = 35/419 (8%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 88  RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 147

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
           K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 148 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 196

Query: 127 LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
           L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 197 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 252

Query: 186 KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 253 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 312

Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
           WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 313 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 372

Query: 297 ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
             +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 373 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 431

Query: 357 AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 432 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 482



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 29  SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 88

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 89  QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 140



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
            +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG   +V +   
Sbjct: 3   QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 62

Query: 480 GKAVYAFGDGEYGKLGLGN 498
           G AVY +G G+Y +LG G+
Sbjct: 63  G-AVYTWGKGDYHRLGHGS 80



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 100 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 159

Query: 473 TV 474
           T+
Sbjct: 160 TL 161


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 202/418 (48%), Gaps = 33/418 (7%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4246 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4305

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4306 KKINRVACGSAHTLAWSTSK--PANAGK---------LPTQVPMEYNHLQEIPIIALRNR 4354

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+  S+L    + +  L    ++  Q     +    +LR +   +       + V  
Sbjct: 4355 LLLLHHISELFCPCIPMFDLEGRLEETGQGPSVGF---DTLRGILISQGKEAAFRKVVQA 4411

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R W
Sbjct: 4412 TMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMCSFSPDSLLLPHRVW 4471

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK +GE  DD GG + ++I EMC EL +G  PLL+ TPNG  ++G NRD ++LNP  ++
Sbjct: 4472 KVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTPNGRDESGANRDCFLLNP-AAK 4530

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
            SL  +  F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L  
Sbjct: 4531 SLLHMNMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGLMY 4590

Query: 358  IRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD       EA   E   +   F   + +G+   I    +   +T  NR +Y   AI
Sbjct: 4591 IRD------NEATSEEFEAMSLPFTVPNASGQ--DIQLSSKYAHITLDNRAEYVRLAI 4640



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  VSCG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T+ G LYT+G G YGRLGHG + +   P+ V AL    V  ++CG    
Sbjct: 4101 IAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDA 4160

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4161 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4187



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 91/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2989 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSG-TVPIPRQITALS 3047

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  I   G+ +Y++G GEYG+LG G+  T LKP
Sbjct: 3108 IACGSSHSAAITSSGE-LYSWGLGEYGRLGHGDNTTQLKP 3146



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LY++G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3108 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3168 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3201



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4187 SDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4247 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4298



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT ++ + P+ V  L    +  V+ G  H 
Sbjct: 3214 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHC 3273

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3274 LAVTDTGQ-VYAWGDNDHGQQGNGTTTVNRKP 3304



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   I+ ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3255 VEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3314

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS +WT   +     H P        P  +  LG+P D
Sbjct: 3315 ITRVACGSSHSVSWTTMDVATPSVHEPVLFQTARDPLGASYLGVPSD 3361



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPL--TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q++P+  T    L+  + +   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ +  L  + +  VSCG   +V +   G+ VY++G G+  +LG G
Sbjct: 642 GSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQ-VYSWGKGDNQRLGHG 693



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H +A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3041 RQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3100

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3101 KTKRIRDIACGSSHSAAITS 3120



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 409  YYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y    IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  V V  V
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKV 4207

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             CG   +V +   G AVY +G G+Y +LG G+
Sbjct: 4208 ECGSQFSVALTKSG-AVYTWGKGDYHRLGHGS 4238



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  ++ G 
Sbjct: 4046 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGG 4105

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G  +Y +G G YG+LG G++   LKP
Sbjct: 4106 AHSACITAAGD-LYTWGKGRYGRLGHGDSEDQLKP 4139



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G ++++G GD GRLGHG T+  + P+ + AL+      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDQTIP 595



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 3/86 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3160 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3219

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLG 497
             ++ +   G  V+ +G G+Y +LG G
Sbjct: 3220 FSLALTKSG-VVWTWGKGDYFRLGHG 3244



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ IV +S G++  +A++  GQV++WG   + +LG G + + R P+L+  L  + 
Sbjct: 652 IEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V AG +H  A T
Sbjct: 712 VIDVVAGSTHCLALT 726



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  ++A
Sbjct: 4044 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAA 4103

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4104 GGAHSACITA 4113



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4258 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4317

Query: 473  TV 474
            T+
Sbjct: 4318 TL 4319



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D+S G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            +I +VS G   S A T
Sbjct: 658 LDIVKVSCGSQFSVALT 674



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V  G  H 
Sbjct: 663 VSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + VY++G  +
Sbjct: 723 LALTEDSE-VYSWGSND 738



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+VF+WG     +LG G+ +   EP+++ ALS     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 41/75 (54%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G++++WG     +LG G+     +P++
Sbjct: 3089 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKM 3148

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3149 VKVLLGHRVIQVACG 3163



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G  ++ R
Sbjct: 3193 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 3250

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3251 KPQVVEGLRGKKIIHVAVGALHCLAVT 3277



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325

Query: 474  V 474
            V
Sbjct: 3326 V 3326



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 36/69 (52%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VDI+ G  H   ++  G ++ WG     +LG G+  +  +P+LV AL  
Sbjct: 4088 RVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQG 4147

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4148 YRVIDIACG 4156



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 39/68 (57%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           ++D+  G+ H LA++   +V++WG+N   Q     +I   +P  +  L +K+I  ++ G 
Sbjct: 712 VIDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACGP 771

Query: 77  SHSAAWTA 84
           + S AW++
Sbjct: 772 AQSFAWSS 779



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H+V I+ G+ +  A++  G+++ WG  +  +LG G+  +   P LV  L    +  VS G
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4309 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4368

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4369 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4417

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4418 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4473

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4474 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4533

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 4534 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 4593

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4594 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4652

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4653 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4703



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 625 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 684

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 685 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 718



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3171 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3230

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3231 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3264



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 3052 FSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSG-TVPIPRQITALS 3110

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3111 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3170

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3171 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3209



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4164 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDA 4223

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4224 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4250



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4309

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4310 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4361



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3318 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3377

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3378 ITRVACGSSHSVAWT 3392



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3277 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3336

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3337 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3367



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 650 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 709

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 710 GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 762



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4216 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4275

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4276 FSVALTKSG-AVYTWGKGDYHRLGHGS 4301



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3104 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3163

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3164 KTKRIRDIACGSSHSAALTS 3183



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4109 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4168

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4169 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4202



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 575 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 634

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 635 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 663



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3223 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3282

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3283 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3316



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ ++ +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 720 IEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 779

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 780 VIDVAAGSTHCLALT 794



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4107 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4166

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4167 GGAHSACVTA 4176



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4321 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4380

Query: 473  TV 474
            T+
Sbjct: 4381 TL 4382



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3256 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3313

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3314 KPQVVEGLRGKKIVHVAVGALHCLAVT 3340



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 731 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 790

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 791 LALTEDSE-VHSWGSND 806



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 560 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 619

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 620 KHVVHIACGSTYSAAITA 637



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3152 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3211

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3212 VKVLLGHRVIQVACG 3226



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 666 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 725

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 726 LDVIKVRCGSQFSIALT 742



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3329 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3388

Query: 474  V 474
            V
Sbjct: 3389 V 3389



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 41/76 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L +K+
Sbjct: 772 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKH 831

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 832 IVGIACGPAQSFAWSS 847



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4151 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4210

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4211 HRVIDIACG 4219


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 206/419 (49%), Gaps = 35/419 (8%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 590 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 649

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
           K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 650 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 698

Query: 127 LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
           L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 699 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 754

Query: 186 KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 755 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 814

Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
           WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 815 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 874

Query: 297 ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
             +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 875 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 933

Query: 357 AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 934 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 984



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 445 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDA 504

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            T+C+ D    V+++GDG+YGKLG G +
Sbjct: 505 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 531



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 531 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 590

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 591 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 642



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 497 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 556

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +V +   G AVY +G G+Y +LG G+
Sbjct: 557 FSVALTKSG-AVYTWGKGDYHRLGHGS 582



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 390 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 449

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H+ C+   G  +Y +G G YG+LG  ++  +  P+
Sbjct: 450 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKPK 484



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 388 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 447

Query: 75  GRSHSAAWTA 84
           G +HSA  TA
Sbjct: 448 GGAHSACVTA 457



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 602 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 661

Query: 473 TV 474
           T+
Sbjct: 662 TL 663



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 432 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 491

Query: 67  KNIRQVSAG 75
             +  ++ G
Sbjct: 492 HRVIDIACG 500


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4243 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4302

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4303 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4351

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4352 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4407

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4408 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4467

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 4468 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 4527

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4528 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4586

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4587 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4637



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4098 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDA 4157

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4158 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4184



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4244 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4295



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3105 IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3165 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3198



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3312 ITRVACGSSHSVAWT 3326



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 89/160 (55%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2986 FSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSG-TVPIPRQITALS 3044

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRD 3104

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++ G +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3105 IAYGSSHSAPLTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3143



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3270

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3271 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3301



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4150 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4209

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4210 FSVALTKSG-AVYTWGKGDYHRLGHGS 4235



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4043 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4102

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4103 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4136



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3038 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQAL 3097

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSA  T+
Sbjct: 3098 KTKRIRDIAYGSSHSAPLTS 3117



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3157 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3217 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3250



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4100

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4101 GGAHSACVTA 4110



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4255 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4314

Query: 473  TV 474
            T+
Sbjct: 4315 TL 4316



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 43/75 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ ++ +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H    T
Sbjct: 712 VIDVAAGSTHCLVLT 726



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3190 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVT 3274



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGEYGKL--GLGNTGLKPT 504
           + + +  + V+++G  +  +    LG T  +PT
Sbjct: 723 LVLTEDSE-VHSWGSNDQCQHFDTLGVTKPEPT 754



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 474  V 474
            V
Sbjct: 3323 V 3323



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVIKVRCGSQFSIALT 674



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H   ++++G+++ WG     +LG G+     +P++
Sbjct: 3086 MNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3146 VKVLLGHRVIQVACG 3160



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4085 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4144

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4145 HRVIDIACG 4153



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/76 (23%), Positives = 38/76 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H L ++   +V +WG+N   Q      +   EP     L +K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGLDSKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4243 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4302

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4303 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4351

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4352 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4407

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4408 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4467

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 4468 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 4527

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4528 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4586

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4587 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4637



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3165 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3198



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2986 FSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSG-TVPIPRQITALS 3044

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3105 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3143



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4098 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDA 4157

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4158 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4184



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4244 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4295



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3312 ITRVACGSSHSVAWT 3326



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3270

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3271 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3301



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4150 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4209

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4210 FSVALTKSG-AVYTWGKGDYHRLGHGS 4235



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3038 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3097

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3098 KTKRIRDIACGSSHSAALTS 3117



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4043 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4102

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4103 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4136



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3157 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3217 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3250



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ ++ +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4100

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4101 GGAHSACVTA 4110



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4255 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4314

Query: 473  TV 474
            T+
Sbjct: 4315 TL 4316



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3190 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVT 3274



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3146 VKVLLGHRVIQVACG 3160



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 474  V 474
            V
Sbjct: 3323 V 3323



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVIKVRCGSQFSIALT 674



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4085 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4144

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4145 HRVIDIACG 4153


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4153 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4212

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4213 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4261

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4262 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4317

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4318 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4377

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 4378 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 4437

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4438 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4496

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4497 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4547



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 467 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 526

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 527 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 560



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4008 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDA 4067

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4068 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4094



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4094 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4153

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4154 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4205



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3015 IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3074

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3075 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3108



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3162 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3221

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3222 ITRVACGSSHSVAWT 3236



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 89/160 (55%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2896 FSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSG-TVPIPRQITALS 2954

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 2955 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRD 3014

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++ G +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3015 IAYGSSHSAPLTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3053



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3121 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3180

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3181 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3211



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 492 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 551

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 552 GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 604



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4060 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4119

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4120 FSVALTKSG-AVYTWGKGDYHRLGHGS 4145



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 3953 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4012

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4013 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4046



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 417 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 476

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 477 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 505



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 2948 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQAL 3007

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSA  T+
Sbjct: 3008 KTKRIRDIAYGSSHSAPLTS 3027



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3067 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3126

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3127 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3160



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 3951 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4010

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4011 GGAHSACVTA 4020



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4165 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4224

Query: 473  TV 474
            T+
Sbjct: 4225 TL 4226



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 43/75 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ ++ +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 562 IEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 621

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H    T
Sbjct: 622 VIDVAAGSTHCLVLT 636



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3100 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3157

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3158 KPQVVEGLRGKKIVHVAVGALHCLAVT 3184



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 573 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 632

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 633 LVLTEDSE-VHSWGSND 648



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 402 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 461

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 462 KHVVHIACGSTYSAAITA 479



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 508 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 567

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 568 LDVIKVRCGSQFSIALT 584



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3173 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3232

Query: 474  V 474
            V
Sbjct: 3233 V 3233



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H   ++++G+++ WG     +LG G+     +P++
Sbjct: 2996 MNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3055

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3056 VKVLLGHRVIQVACG 3070



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 3995 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4054

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4055 HRVIDIACG 4063



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/76 (23%), Positives = 38/76 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H L ++   +V +WG+N   Q      +   EP     L +K+
Sbjct: 614 LEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGLDSKH 673

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 674 IVGIACGPAQSFAWSS 689


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4243 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4302

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4303 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4351

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4352 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4407

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4408 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4467

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 4468 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 4527

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4528 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4586

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4587 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4637



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDA 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3165 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3198



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2986 FSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSG-TVPIPRQITALS 3044

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3105 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3143



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 3/94 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4098 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDA 4157

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             T+C+ D    V+++GDG+YGKLG G +     P
Sbjct: 4158 QTLCLTDD-DTVWSWGDGDYGKLGRGGSDGSKVP 4190



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4184 SDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4244 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4295



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3312 ITRVACGSSHSVAWT 3326



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3270

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3271 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3301



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LGLG 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGLGT 694



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4150 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQ 4209

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4210 FSVALTKSG-AVYTWGKGDYHRLGHGS 4235



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3038 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3097

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3098 KTKRIRDIACGSSHSAALTS 3117



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4043 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4102

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4103 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4136



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3157 VACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3217 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3250



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 45/75 (60%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ ++ +  G++  +A++  GQV++WG   + +LGLG + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4100

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4101 GGAHSACVTA 4110



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4255 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4314

Query: 473  TV 474
            T+
Sbjct: 4315 TL 4316



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3190 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVT 3274



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3146 VKVLLGHRVIQVACG 3160



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 474  V 474
            V
Sbjct: 3323 V 3323



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVIKVRCGSQFSIALT 674



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 41/76 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L +K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLG GT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4085 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4144

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4145 HRVIDIACG 4153


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4248 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4307

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4308 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4356

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4357 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4412

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4413 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4472

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 4473 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 4532

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4533 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4591

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4592 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4642



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 562 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 621

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 622 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 655



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3110 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3169

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3170 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3203



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2991 FSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSG-TVPIPRQITALS 3049

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3050 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3109

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3110 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3148



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4103 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDA 4162

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4163 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4189



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4189 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4248

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4249 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4300



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3257 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3316

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3317 ITRVACGSSHSVAWT 3331



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3216 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3275

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3276 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3306



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 587 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 646

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 647 GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 699



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4155 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4214

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4215 FSVALTKSG-AVYTWGKGDYHRLGHGS 4240



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3043 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3102

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3103 KTKRIRDIACGSSHSAALTS 3122



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4048 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4107

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4108 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4141



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 512 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 571

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 572 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 600



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3162 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3221

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3222 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3255



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ ++ +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 657 IEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 716

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 717 VIDVAAGSTHCLALT 731



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4046 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4105

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4106 GGAHSACVTA 4115



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4260 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4319

Query: 473  TV 474
            T+
Sbjct: 4320 TL 4321



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3195 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3252

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3253 KPQVVEGLRGKKIVHVAVGALHCLAVT 3279



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 668 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 727

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 728 LALTEDSE-VHSWGSND 743



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 497 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 556

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 557 KHVVHIACGSTYSAAITA 574



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3091 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3150

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3151 VKVLLGHRVIQVACG 3165



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3268 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3327

Query: 474  V 474
            V
Sbjct: 3328 V 3328



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 603 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 662

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 663 LDVIKVRCGSQFSIALT 679



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 41/76 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L +K+
Sbjct: 709 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKH 768

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 769 IVGIACGPAQSFAWSS 784



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4090 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4149

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4150 HRVIDIACG 4158


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 202/420 (48%), Gaps = 37/420 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4247 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4306

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4307 KKINRVACGSAHTLAWSTSK--PANAGK---------LPTQVPMEYNHLQEIPIISLRNR 4355

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G +D+     +    +   +LR +   +       + V 
Sbjct: 4356 LLLLHHISELFCPCIPMFDLEGRLDETGQGPS----IGFDTLRGILISQGKEAAFRKVVQ 4411

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4412 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4471

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G  PLL+ TPNG  ++G NRD ++LNP  +
Sbjct: 4472 WKVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTPNGRDESGANRDCFLLNP-AA 4530

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
            +SL  +  F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4531 KSLLHMNMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGLM 4590

Query: 357  AIRDIHLSG--VTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD   +       + P  +P    +    + + T I         T  NR +Y   AI
Sbjct: 4591 YIRDNEATSEEFEAMSLPFTVPNASGQDIQLSSKYTHI---------TLDNRAEYVRMAI 4641



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  VSCG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3168 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3201



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2989 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3047

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3108 IACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3146



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA +T+ G L+T+G G YGRLGHG + +   P+ V AL    V  ++CG    
Sbjct: 4101 VAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDA 4160

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4161 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4187



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3314

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3315 ITRVACGSSHSVAWTTVDVATPAVHEPVLFQTARDPLGASYLGVPSD 3361



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT ++ + P+ V  L    +  V+ G  H 
Sbjct: 3214 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHC 3273

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3274 LAVTDTGQ-VYAWGDNDHGQQGNGTTTVNRKP 3304



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H +A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3041 RQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3100

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3101 KTKRIRDIACGSSHSAAITS 3120



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPL--TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q++P+  T    L+  + +   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ +  L  + +  V CG   ++ +   G+ VY +G G+  +LG G
Sbjct: 642 GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQ-VYTWGKGDNQRLGHG 693



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4046 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4105

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G  ++ +G G YG+LG G++   LKP
Sbjct: 4106 AHSACITAAGD-LFTWGKGRYGRLGHGDSEDQLKP 4139



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   +++NG ++++G GD GRLGHG T+  + P+ + AL+      HV  ++CG  ++  
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDQTIP 595



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFG-NGDYGRLGHGTTMNWKVP 452
            + G  VP+   +        + CG + S  +T +G +YT+    DY RLGHG+  + + P
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRP 4246

Query: 453  ERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4247 RQVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4299



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 3/86 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3160 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3219

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLG 497
             ++ +   G  V+ +G G+Y +LG G
Sbjct: 3220 FSLALTKSG-VVWTWGKGDYFRLGHG 3244



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 43/75 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ IV +  G++  +A++  GQV+ WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4044 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4103

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4104 GGAHSACITA 4113



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4259 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4318

Query: 473  TV 474
            T+
Sbjct: 4319 TL 4320



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 8/95 (8%)

Query: 409  YYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y    IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4207

Query: 467  SCGLNHTVCIADKGKAVYA---FGDGEYGKLGLGN 498
             CG   +V +   G AVY    F D  Y +LG G+
Sbjct: 4208 ECGSQFSVALTKSG-AVYTWQVFRD--YHRLGHGS 4239



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA+S  G+VF+WG     +LG G+ +   EP+++ ALS     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +YT+G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D+S G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            +I +V  G   S A T
Sbjct: 658 LDIVKVRCGSQFSIALT 674



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G  ++ R
Sbjct: 3193 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 3250

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3251 KPQVVEGLRGKKIVHVAVGALHCLAVT 3277



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3089 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3148

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3149 VKVLLGHRVIQVACG 3163



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325

Query: 474  V 474
            V
Sbjct: 3326 V 3326



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 36/69 (52%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   ++  G +F WG     +LG G+  +  +P+LV AL  
Sbjct: 4088 RVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQG 4147

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4148 YRVIDIACG 4156



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   K   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 704 LEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H+V I+ G+ +  A++  G+++ WG  +  +LG G+  +   P LV  L    +  VS G
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4243 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4302

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4303 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4351

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4352 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4407

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4408 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4467

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 4468 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 4527

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4528 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4586

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4587 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4637



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3165 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3198



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2986 FSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSG-TVPIPRQITALS 3044

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3105 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3143



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4098 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDA 4157

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4158 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4184



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4244 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4295



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3312 ITRVACGSSHSVAWT 3326



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3270

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3271 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3301



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4150 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4209

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4210 FSVALTKSG-AVYTWGKGDYHRLGHGS 4235



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3038 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3097

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3098 KTKRIRDIACGSSHSAALTS 3117



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4043 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4102

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4103 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4136



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3157 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3217 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3250



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ ++ +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4100

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4101 GGAHSACVTA 4110



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4255 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4314

Query: 473  TV 474
            T+
Sbjct: 4315 TL 4316



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3190 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVT 3274



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3146 VKVLLGHRVIQVACG 3160



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 474  V 474
            V
Sbjct: 3323 V 3323



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVIKVRCGSQFSIALT 674



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 41/76 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L +K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4085 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4144

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4145 HRVIDIACG 4153


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 206/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4186 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4245

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4246 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 4294

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4295 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4350

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4351 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4410

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+LNP   
Sbjct: 4411 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 4470

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4471 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4529

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4530 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4580



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 502 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 561

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 562 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 595



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3048 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3107

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3108 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3141



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2929 FSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSG-TVPIPRQITALS 2987

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 2988 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3047

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3048 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3086



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4041 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDA 4100

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4101 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4127



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4127 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4186

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4187 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4238



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3195 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3254

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3255 ITRVACGSSHSVAWT 3269



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3154 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3213

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3214 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3244



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 527 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 586

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 587 GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 639



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4093 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4152

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4153 FSVALTKSG-AVYTWGKGDYHRLGHGS 4178



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 2981 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3040

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3041 KTKRIRDIACGSSHSAALTS 3060



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 3986 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4045

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4046 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4079



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 512 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 540



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3100 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3159

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G  V+ +G G+Y +LG G+
Sbjct: 3160 FSLALTKSG-VVWTWGKGDYFRLGHGS 3185



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ ++ +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 597 IEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 656

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 657 VIDVAAGSTHCLALT 671



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 3984 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4043

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4044 GGAHSACVTA 4053



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4198 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4257

Query: 473  TV 474
            T+
Sbjct: 4258 TL 4259



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3133 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3190

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3191 KPQVVEGLRGKKIVHVAVGALHCLAVT 3217



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 608 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 667

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 668 LALTEDSE-VHSWGSND 683



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 496

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 497 KHVVHIACGSTYSAAITA 514



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3029 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3088

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3089 VKVLLGHRVIQVACG 3103



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3206 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3265

Query: 474  V 474
            V
Sbjct: 3266 V 3266



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 543 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 602

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 603 LDVIKVRCGSQFSIALT 619



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 649 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKH 708

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 709 IVGIACGPAQSFAWSS 724



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4028 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4087

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4088 HRVIDIACG 4096


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 207/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 1834 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 1893

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 1894 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 1942

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 1943 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 1998

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 1999 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 2058

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 2059 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 2118

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 2119 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 2177

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 2178 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 2228



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 697 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 756

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 757 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 790



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351 YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
           ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 578 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 636

Query: 406 RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 637 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 696

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
           ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 697 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 735



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 1689 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 1748

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 1749 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 1775



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 1775 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1834

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 1835 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 1886



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 844 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 903

Query: 69  IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
           I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 904 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 950



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 803 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 862

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 863 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 893



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 1741 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 1800

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 1801 FSVALTKSG-AVYTWGKGDYHRLGHGS 1826



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 630 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 689

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
             K IR ++ G SHSAA T+
Sbjct: 690 KTKRIRDIACGSSHSAALTS 709



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 1634 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 1693

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H+ C+   G  +Y +G G YG+LG  ++  +  P+
Sbjct: 1694 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKPK 1728



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414 IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 749 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 808

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 809 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 842



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 1632 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 1691

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 1692 GGAHSACVTA 1701



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 1846 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 1905

Query: 473  TV 474
            T+
Sbjct: 1906 TL 1907



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3   GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 782 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 839

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
           +PQ+V  L  K I  V+ G  H  A T
Sbjct: 840 KPQVVEGLRGKKIVHVAVGALHCLAVT 866



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++V  L  
Sbjct: 684 RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG 743

Query: 67  KNIRQVSAG 75
             + QV+ G
Sbjct: 744 HRVIQVACG 752



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 855 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 914

Query: 474 V 474
           V
Sbjct: 915 V 915



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 1676 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 1735

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 1736 HRVVDIACG 1744


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 208/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 3937 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 3996

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 3997 KKVNRVACGSAHTLAWST---------SKPASAGKL--PAQVPMEYNHLQEIPIIALRNR 4045

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +   +   + V 
Sbjct: 4046 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEVAFRKVVQ 4101

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4102 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4161

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4162 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4221

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4222 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4280

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4281 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4331



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 2800 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2859

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 2860 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 2893



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2681 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 2739

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 2740 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 2799

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 2800 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 2838



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 3792 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 3851

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 3852 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 3878



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 3878 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3937

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 3938 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 3989



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 2947 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3006

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3007 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3053



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 2906 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 2965

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 2966 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 2996



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 38/56 (67%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG
Sbjct: 511 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 566



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 3844 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 3903

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 3904 FSVALTKSG-AVYTWGKGDYHRLGHGS 3929



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 2733 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 2792

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 2793 KTKRIRDIACGSSHSAALTS 2812



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 3737 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 3796

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 3797 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 3830



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 461 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 520

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 521 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 549



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 2852 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 2911

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 2912 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 2945



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 3735 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 3794

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 3795 GGAHSACVTA 3804



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 3949 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4008

Query: 473  TV 474
            T+
Sbjct: 4009 TL 4010



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 2885 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2942

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 2943 KPQVVEGLRGKKIVHVAVGALHCLAVT 2969



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 446 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 505

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 506 KHVVHIACGSTYSAAITA 523



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 2781 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 2840

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 2841 VKVLLGHRVIQVACG 2855



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 2958 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3017

Query: 474  V 474
            V
Sbjct: 3018 V 3018



 Score = 45.1 bits (105), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+I  ++ G 
Sbjct: 682 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDAKHIMGITCGP 741

Query: 77  SHSAAWTA 84
           + S AW++
Sbjct: 742 AQSCAWSS 749



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 3779 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 3838

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 3839 HRVVDIACG 3847


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 134/425 (31%), Positives = 208/425 (48%), Gaps = 58/425 (13%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S+ G+VF WG+N + QLG G     + P+LV +L  
Sbjct: 4378 KKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQG 4437

Query: 67   KNIRQVSAGRSHSAAWTAPPL-----PPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLP 121
            K+I +V  G +H+ A +   L     PP      PS  L   L +DI     H       
Sbjct: 4438 KHIVKVICGSAHTLALSTYQLSEAVRPP------PSPPLEYDLVRDIAPEVLH------- 4484

Query: 122  LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLV 181
               ARL LL+ FS+L+   + +LP+           P S     SL+ +    +      
Sbjct: 4485 ---ARLVLLHHFSELLCPCLAMLPIAG---------PLSL---ASLKDVLVYSIKETGFR 4529

Query: 182  RSVGKTMLVGKNFGPSVTVRRLTTKSKQT-----------VKPIFAQISRQVVKMKGSDL 230
            + +  TM+  K  GP + + R+  K  +            +K +F Q+ +++  +    L
Sbjct: 4530 KVIQTTMVRDKPHGPVIELNRIQVKRSRMRSGNGLAGVDGMKSVFGQMVQKLPLLTQEAL 4589

Query: 231  RLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYI 290
             +P R WKVK +GE  DD GG F ++I EMC EL +G+VPLL++TPNG  + G NRD ++
Sbjct: 4590 SMPHRVWKVKFVGESVDDCGGGFSESIAEMCDELQNGSVPLLIQTPNGRGEAGANRDCFL 4649

Query: 291  LNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTL 350
            L+P L+  L   M F+FLG+L G+A+RT  PL  P    VW+ +  E +   DL + D  
Sbjct: 4650 LDPTLTSVLHMNM-FRFLGVLMGIAVRTGSPLAEP----VWRQLCGETLRPADLTEVDRD 4704

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQY 409
            Y   L  IRD+      E++      +E  F   S  G   P+ T  +   +T  NR +Y
Sbjct: 4705 YITGLLYIRDV------ESDPKVFASIELPFSTPSAKGHEVPLST--KYTKITPENRNEY 4756

Query: 410  YEAAI 414
             + A+
Sbjct: 4757 VKLAL 4761



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 30/162 (18%)

Query: 362 HLSGVTEANFP-EIIPLEC--------FEGA------------SWT----GRITPIVTGG 396
           H   +TE N+P ++  LEC         EG             SW     GR+    T  
Sbjct: 589 HAISMTEDNYPAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSA 648

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           + +P   A         + CG  +SA +T++G LYT+G G YGRLGHG + +  VP  V 
Sbjct: 649 KELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVT 708

Query: 457 ALNK---VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           AL     VHV ++ CG  H++C+ + G A +A+GDG++GKLG
Sbjct: 709 ALKAHRVVHV-ALGCGDAHSLCVTEAGLA-FAWGDGDFGKLG 748



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V AL    V  V+CG    
Sbjct: 3172 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDA 3231

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ + G  V+++GDG++GKLG G +
Sbjct: 3232 QTLCLTEDG-LVFSWGDGDFGKLGRGGS 3258



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +T  G++ T+G G YGRLGHG + +   P+ V AL       ++CG    
Sbjct: 4233 IACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDA 4292

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+CI D    V+++GDG+YGKLG G +
Sbjct: 4293 QTLCITDDDN-VWSWGDGDYGKLGRGGS 4319



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 48/77 (62%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV+++GQV+AWG+N   Q G GN I  ++P LVL L    
Sbjct: 3319 IQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIF 3378

Query: 69   IRQVSAGRSHSAAWTAP 85
            + +V+ G SHS AW+ P
Sbjct: 3379 VNRVACGSSHSVAWSLP 3395



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A  C  +H   + S+G +Y++G+GD GRLGHG T   ++P R+ AL    V  V CG 
Sbjct: 611 QLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGS 670

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +++  I   G+ +Y +G G YG+LG GN+  K  P
Sbjct: 671 SYSAAITASGE-LYTWGRGTYGRLGHGNSEDKYVP 704



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG T + + P+
Sbjct: 4319 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPK 4378

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V AL    + S++ G  H V  +D G+ V+ +GD + G+LG G       P+
Sbjct: 4379 KVAALQGKKIISIATGSLHCVACSDAGE-VFTWGDNDEGQLGDGTVSAIQRPR 4430



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 14/162 (8%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVPLTFAN 405
            Y+  L  ++ IH++G +++ F  I+  +     C EG +  GR+          P     
Sbjct: 3054 YSSVLSQLKPIHIAGGSKSLF--IVSQDGKLYACGEGTN--GRLGLGHNNNVPTPKQVPI 3109

Query: 406  RLQYY--EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
              QY   + A+  G KH+  +T +G ++++G G+ G+LGHG  +  + P+ +  L    +
Sbjct: 3110 LSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRI 3169

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
              ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3170 RDIACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNCTQLKP 3210



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHGT  + + P  +  L    V  V+ G  H 
Sbjct: 3278 IECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHC 3337

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 3338 LAVTDSGQ-VYAWGDNDHGQQGSGNTIVNKKP 3368



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 4/108 (3%)

Query: 402  TFANRLQYY---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
            T    LQ+    + A+  G KH   ++S+G ++++G G+ G+LGHG   ++  P+ + +L
Sbjct: 4166 TLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIESL 4225

Query: 459  NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + + V  ++CG  H+ CI  +G  V  +G G YG+LG G++  +  P+
Sbjct: 4226 SGIGVVDIACGSAHSACITIQGH-VLTWGKGRYGRLGHGDSEDQLQPK 4272



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 407  LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            L Y    IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V 
Sbjct: 4278 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVT 4337

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             V CG   +V +   G +VY +G G+Y +LG GNT
Sbjct: 4338 KVECGSQFSVALTRSG-SVYTWGKGDYHRLGHGNT 4371



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 5/96 (5%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G ++++G+GD+G+LG G +    +P +V  LN V V  + CG  
Sbjct: 3224 VACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQ 3283

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKPTP 505
             ++ +   G+ V+ +G G+Y +LG G      KPTP
Sbjct: 3284 FSLALTKAGE-VWTWGKGDYYRLGHGTDQHVRKPTP 3318



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            + +P      +  ++V  G +H +A++  G+VF+WG   D +LG GN++   +P+L+  L
Sbjct: 3105 KQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETL 3164

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3165 RTKRIRDIACGSSHSAAITS 3184



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 44/69 (63%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+VF+WG   D +LG GN+ +Y  P+L+ +LS   +  ++ 
Sbjct: 4176 IKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIAC 4235

Query: 75   GRSHSAAWT 83
            G +HSA  T
Sbjct: 4236 GSAHSACIT 4244



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A+ CG  HS  VT  G  + +G+GD+G+LG+ + +   VP +V       V  V  G   
Sbjct: 719 ALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQF 778

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +V +  +G  VY +G G  G+LG GN+   P P+
Sbjct: 779 SVALTREG-TVYTWGKGHGGRLGHGNSEHSPVPK 811



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G G T+  K P  V+ L+ + V  V+CG +H+
Sbjct: 3330 VAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHS 3389

Query: 474  V 474
            V
Sbjct: 3390 V 3390



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           G SVP+            +  G + S  +T  G +YT+G G  GRLGHG + +  VP+ V
Sbjct: 754 GTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMV 813

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL 494
            AL    +  ++ GL H + +   G+ +Y +G  ++ ++
Sbjct: 814 QALEGKKIVDLAVGLAHCLALTASGE-LYGWGRNDFQQI 851



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 38/67 (56%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   I DI+ G+ H  A++++G+++ WG     +LG G+     +P+LV AL +  
Sbjct: 3161 IETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHR 3220

Query: 69   IRQVSAG 75
            + QV+ G
Sbjct: 3221 VVQVACG 3227



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)

Query: 17  IVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           IV ++   E  HVLA++++G V++WG+    +LG G+      P  + AL+++ +  V  
Sbjct: 609 IVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFC 668

Query: 75  GRSHSAAWTA 84
           G S+SAA TA
Sbjct: 669 GSSYSAAITA 678



 Score = 45.4 bits (106), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G ++T+G+ D G+LG GT    + P  V +L   H+  V CG  H
Sbjct: 4390 SIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAH 4449

Query: 473  TVCIA 477
            T+ ++
Sbjct: 4450 TLALS 4454



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 37/68 (54%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +  G++  +A++  G V+ WG     +LG GN  +   P++V AL  K I  ++ G 
Sbjct: 769 VVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGL 828

Query: 77  SHSAAWTA 84
           +H  A TA
Sbjct: 829 AHCLALTA 836



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G  IP        + ++ I  G +  LA++  G+V+ WG     +LG G   + R+P
Sbjct: 3257 GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKP 3316

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
              +  L  K +  V+ G  H  A T
Sbjct: 3317 TPIQGLRGKKVIHVAVGALHCLAVT 3341



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 30/56 (53%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            I +   I +VDI+ G+ H   ++  G V  WG     +LG G+  +  +P+LV AL
Sbjct: 4222 IESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEAL 4277



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 4   TSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQ 59
           TS + +P    A  +  +  +  G+ +  A++ +G+++ WG  +  +LG GN  +   P 
Sbjct: 646 TSAKELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPT 705

Query: 60  LVLALSNKNIRQVS--AGRSHSAAWTAPPL 87
           LV AL    +  V+   G +HS   T   L
Sbjct: 706 LVTALKAHRVVHVALGCGDAHSLCVTEAGL 735


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 202/420 (48%), Gaps = 37/420 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4246 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4305

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4306 KKINRVACGSAHTLAWSTSK--PANAGK---------LPTQVPMEYNHLQEIPIISLRNR 4354

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G +D+     +    +   +LR +   +       + V 
Sbjct: 4355 LLLLHHISELFCPCIPMFDLEGRLDETGQGPS----VGFDTLRGILISQGKEAAFRKVVQ 4410

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4411 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4470

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G  PLL+ TPNG  ++G NRD ++LNP  +
Sbjct: 4471 WKVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTPNGRDESGANRDCFLLNP-AA 4529

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
            +SL  +  F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4530 KSLLHMNMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGLM 4589

Query: 357  AIRDIHLSG--VTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD   +       + P  +P    +    + + T I         T  NR +Y   AI
Sbjct: 4590 YIRDNEATSEEFEAMSLPFTVPNASGQDIQLSSKYTHI---------TLDNRAEYVRLAI 4640



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  VSCG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3168 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3201



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2989 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3047

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3108 IACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3146



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T+ G L+T+G G YGRLGHG + +   P+ V AL    V  ++CG    
Sbjct: 4101 IAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDA 4160

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4161 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4187



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4187 SDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4247 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4298



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3314

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3315 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3361



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT ++ + P+ V  L    +  V+ G  H 
Sbjct: 3214 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHC 3273

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3274 LAVTDTGQ-VYAWGDNDHGQQGNGTTTVNRKP 3304



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H +A++  G++F+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3041 RQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3100

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3101 KTKRIRDIACGSSHSAAITS 3120



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 409  YYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y    IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKV 4207

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             CG   +V +   G AVY +G G+Y +LG G+
Sbjct: 4208 ECGSQFSVALTKSG-AVYTWGKGDYHRLGHGS 4238



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPL--TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q++P+  T    L+  + +   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ +  L  + +  V CG   ++ +   G+ VY +G G+  +LG G
Sbjct: 642 GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQ-VYTWGKGDNQRLGHG 693



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  ++ G 
Sbjct: 4046 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGG 4105

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G  ++ +G G YG+LG G++   LKP
Sbjct: 4106 AHSACITAAGD-LFTWGKGRYGRLGHGDSEDQLKP 4139



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   +++NG ++++G GD GRLGHG T+  + P+ + AL+      HV  ++CG  ++  
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDQTIP 595



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 3/86 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3160 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3219

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLG 497
             ++ +   G  V+ +G G+Y +LG G
Sbjct: 3220 FSLALTKSG-VVWTWGKGDYFRLGHG 3244



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 43/75 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ IV +  G++  +A++  GQV+ WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  ++A
Sbjct: 4044 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAA 4103

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4104 GGAHSACITA 4113



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4258 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4317

Query: 473  TV 474
            T+
Sbjct: 4318 TL 4319



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA+S  G+VF+WG     +LG G+ +   EP+L+ ALS     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +YT+G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D+S G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            +I +V  G   S A T
Sbjct: 658 LDIVKVRCGSQFSIALT 674



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G  ++ R
Sbjct: 3193 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 3250

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3251 KPQVVEGLRGKKIVHVAVGALHCLAVT 3277



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3089 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3148

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3149 VKVLLGHRVIQVACG 3163



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 36/69 (52%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VDI+ G  H   ++  G +F WG     +LG G+  +  +P+LV AL  
Sbjct: 4088 RVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQG 4147

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4148 YRVIDIACG 4156



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325

Query: 474  V 474
            V
Sbjct: 3326 V 3326



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   K   ++D++ G+ H LA++   +V +WG+N   Q     +I   EP  +  L  K+
Sbjct: 704 LEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H+V I+ G+ +  A++  G+++ WG  +  +LG G+  +   P LV  L    +  VS G
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 202/420 (48%), Gaps = 37/420 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4222 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4281

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4282 KKINRVACGSAHTLAWSTSK--PANAGK---------LPTQVPMEYNHLQEIPIISLRNR 4330

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G +D+     +    +   +LR +   +       + V 
Sbjct: 4331 LLLLHHISELFCPCIPMFDLEGRLDETGQGPS----VGFDTLRGILISQGKEAAFRKVVQ 4386

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4387 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4446

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G  PLL+ TPNG  ++G NRD ++LNP  +
Sbjct: 4447 WKVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTPNGRDESGANRDCFLLNP-AA 4505

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
            +SL  +  F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4506 KSLLHMNMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGLM 4565

Query: 357  AIRDIHLSG--VTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD   +       + P  +P    +    + + T I         T  NR +Y   AI
Sbjct: 4566 YIRDNEATSEEFEAMSLPFTVPNASGQDIQLSSKYTHI---------TLDNRAEYVRLAI 4616



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  VSCG    
Sbjct: 533 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 592

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 593 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 626



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3084 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3143

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3144 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3177



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2965 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3023

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3024 NYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3083

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3084 IACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3122



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T+ G L+T+G G YGRLGHG + +   P+ V AL    V  ++CG    
Sbjct: 4077 IAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDA 4136

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4137 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4163



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4163 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4222

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4223 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4274



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3231 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3290

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3291 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3337



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT ++ + P+ V  L    +  V+ G  H 
Sbjct: 3190 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHC 3249

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3250 LAVTDTGQ-VYAWGDNDHGQQGNGTTTVNRKP 3280



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H +A++  G++F+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3017 RQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3076

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3077 KTKRIRDIACGSSHSAAITS 3096



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 409  YYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y    IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V
Sbjct: 4124 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4183

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             CG   +V +   G AVY +G G+Y +LG G+
Sbjct: 4184 ECGSQFSVALTKSG-AVYTWGKGDYHRLGHGS 4214



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPL--TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q++P+  T    L+  + +   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 558 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 617

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ +  L  + +  V CG   ++ +   G+ VY +G G+  +LG G
Sbjct: 618 GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQ-VYTWGKGDNQRLGHG 669



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  ++ G 
Sbjct: 4022 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGG 4081

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G  ++ +G G YG+LG G++   LKP
Sbjct: 4082 AHSACITAAGD-LFTWGKGRYGRLGHGDSEDQLKP 4115



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   +++NG ++++G GD GRLGHG T+  + P+ + AL+      HV  ++CG  ++  
Sbjct: 483 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 542

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 543 ITAEGE-LYTWGRGNYGRLGHGSSEDQTIP 571



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3136 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3195

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G       PQ
Sbjct: 3196 FSLALTKSG-VVWTWGKGDYFRLGHGTDVHVRKPQ 3229



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 43/75 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ IV +  G++  +A++  GQV+ WG   + +LG G + + R P+L+  L  K 
Sbjct: 628 IEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKK 687

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 688 VIDVAAGSTHCLALT 702



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  ++A
Sbjct: 4020 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAA 4079

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4080 GGAHSACITA 4089



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4234 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4293

Query: 473  TV 474
            T+
Sbjct: 4294 TL 4295



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA+S  G+VF+WG     +LG G+ +   EP+L+ ALS     
Sbjct: 468 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAG 527

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 528 KHVVHIACGSTYSAAITA 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +YT+G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 639 VRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHC 698

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 699 LALTEDSE-VHSWGSND 714



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D+S G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 574 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 633

Query: 67  KNIRQVSAGRSHSAAWT 83
            +I +V  G   S A T
Sbjct: 634 LDIVKVRCGSQFSIALT 650



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G  ++ R
Sbjct: 3169 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 3226

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3227 KPQVVEGLRGKKIVHVAVGALHCLAVT 3253



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3065 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3124

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3125 VKVLLGHRVIQVACG 3139



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 36/69 (52%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VDI+ G  H   ++  G +F WG     +LG G+  +  +P+LV AL  
Sbjct: 4064 RVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQG 4123

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4124 YRVIDIACG 4132



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3242 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3301

Query: 474  V 474
            V
Sbjct: 3302 V 3302



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   K   ++D++ G+ H LA++   +V +WG+N   Q     +I   EP  +  L  K+
Sbjct: 680 LEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKH 739

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 740 IVGIACGPAQSFAWSS 755



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H+V I+ G+ +  A++  G+++ WG  +  +LG G+  +   P LV  L    +  VS G
Sbjct: 529 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 588


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 207/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4272 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4331

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4332 KKVNRVACGSAHTLAWST---------SKPASAGKL--PAQVPMEYNHLQEIPIIALRNR 4380

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4381 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4436

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4437 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMTSFGPDSLLLPHRV 4496

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4497 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4556

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4557 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4615

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4616 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4666



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3164 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3197



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2985 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3043

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3044 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3104 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3142



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4127 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4186

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4187 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4213



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4213 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4272

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4273 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4324



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3311 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3357



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3269

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3270 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3300



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4179 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4238

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4239 FSVALTKSG-AVYTWGKGDYHRLGHGS 4264



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3037 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3096

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3097 KTKRIRDIACGSSHSAALTS 3116



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4072 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4131

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4132 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4165



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3156 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3215

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G  V+ +G G+Y +LG G+
Sbjct: 3216 FSLALTKSG-VVWTWGKGDYFRLGHGS 3241



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4070 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4129

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4130 GGAHSACVTA 4139



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4284 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4343

Query: 473  TV 474
            T+
Sbjct: 4344 TL 4345



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3189 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3246

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3247 KPQVVEGLRGKKIVHVAVGALHCLAVT 3273



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3144

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3145 VKVLLGHRVIQVACG 3159



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 474  V 474
            V
Sbjct: 3322 V 3322



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4114 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4173

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4174 HRVVDIACG 4182


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 207/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4236 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4295

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4296 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 4344

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4345 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4400

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4401 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMTSFGPDSLLLPHRV 4460

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4461 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4520

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4521 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4579

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4580 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4630



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3099 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3158

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3159 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3192



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2980 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3038

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3039 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3098

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3099 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3137



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4091 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4150

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4151 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4177



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4177 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4236

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4237 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4288



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3246 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3305

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3306 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3352



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3205 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3264

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3265 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3295



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4143 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4202

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4203 FSVALTKSG-AVYTWGKGDYHRLGHGS 4228



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3032 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3091

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3092 KTKRIRDIACGSSHSAALTS 3111



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4036 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4095

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4096 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4129



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3151 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3210

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3211 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3244



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4034 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4093

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4094 GGAHSACVTA 4103



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4248 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4307

Query: 473  TV 474
            T+
Sbjct: 4308 TL 4309



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3184 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3241

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3242 KPQVVEGLRGKKIVHVAVGALHCLAVT 3268



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3080 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3139

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3140 VKVLLGHRVIQVACG 3154



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3257 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3316

Query: 474  V 474
            V
Sbjct: 3317 V 3317



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4078 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4137

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4138 HRVVDIACG 4146


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 207/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4300

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4301 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 4349

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4350 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4405

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4406 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMTSFGPDSLLLPHRV 4465

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4466 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4525

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4526 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4584

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4585 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4635



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3164 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3197



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2985 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3043

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3044 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3104 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3142



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4096 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4155

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4156 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4182



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4242 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4293



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3311 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3357



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3269

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3270 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3300



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4148 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4207

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4208 FSVALTKSG-AVYTWGKGDYHRLGHGS 4233



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3037 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3096

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3097 KTKRIRDIACGSSHSAALTS 3116



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4100

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4101 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4134



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3156 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3215

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3216 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3249



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4099 GGAHSACVTA 4108



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4253 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4312

Query: 473  TV 474
            T+
Sbjct: 4313 TL 4314



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3189 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3246

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3247 KPQVVEGLRGKKIVHVAVGALHCLAVT 3273



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3144

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3145 VKVLLGHRVIQVACG 3159



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 474  V 474
            V
Sbjct: 3322 V 3322



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4083 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4142

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4143 HRVVDIACG 4151


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 202/420 (48%), Gaps = 37/420 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4246 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4305

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4306 KKINRVACGSAHTLAWSTSK--PANAGK---------LPTQVPMEYNHLQEIPIISLRNR 4354

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G +D+     +    +   +LR +   +       + V 
Sbjct: 4355 LLLLHHISELFCPCIPMFDLEGRLDETGQGPS----VGFDTLRGILISQGKEAAFRKVVQ 4410

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4411 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4470

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G  PLL+ TPNG  ++G NRD ++LNP  +
Sbjct: 4471 WKVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTPNGRDESGANRDCFLLNP-AA 4529

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
            +SL  +  F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4530 KSLLHMNMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGLM 4589

Query: 357  AIRDIHLSG--VTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD   +       + P  +P    +    + + T I         T  NR +Y   AI
Sbjct: 4590 YIRDNEATSEEFEAMSLPFTVPNASGQDIQLSSKYTHI---------TLDNRAEYVRLAI 4640



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  VSCG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3168 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3201



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2989 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3047

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3108 IACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3146



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T+ G L+T+G G YGRLGHG + +   P+ V AL    V  ++CG    
Sbjct: 4101 IAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDA 4160

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4161 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4187



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4247 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4298



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3314

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3315 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3361



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT ++ + P+ V  L    +  V+ G  H 
Sbjct: 3214 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHC 3273

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3274 LAVTDTGQ-VYAWGDNDHGQQGNGTTTVNRKP 3304



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H +A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3041 RQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3100

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3101 KTKRIRDIACGSSHSAAITS 3120



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 409  YYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y    IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4207

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             CG   +V +   G AVY +G G+Y +LG G+
Sbjct: 4208 ECGSQFSVALTKSG-AVYTWGKGDYHRLGHGS 4238



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPL--TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q++P+  T    L+  + +   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ +  L  + +  V CG   ++ +   G+ VY +G G+  +LG G
Sbjct: 642 GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQ-VYTWGKGDNQRLGHG 693



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   +++NG ++++G GD GRLGHG T+  + P+ + AL+      HV  ++CG  ++  
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDQTIP 595



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++  G +Y++G  + G+LGHG       P  + +L  + V  ++ G 
Sbjct: 4046 KVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGG 4105

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G  ++ +G G YG+LG G++   LKP
Sbjct: 4106 AHSACITAAGD-LFTWGKGRYGRLGHGDSEDQLKP 4139



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 3/86 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3160 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3219

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLG 497
             ++ +   G  V+ +G G+Y +LG G
Sbjct: 3220 FSLALTKSG-VVWTWGKGDYFRLGHG 3244



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 43/75 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ IV +  G++  +A++  GQV+ WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4258 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4317

Query: 473  TV 474
            T+
Sbjct: 4318 TL 4319



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 42/70 (60%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S  G+V++WG   D +LG GN+     P+++ +L    +  ++A
Sbjct: 4044 IKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAA 4103

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4104 GGAHSACITA 4113



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA+S  G+VF+WG     +LG G+ +   EP+++ ALS     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +YT+G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D+S G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            +I +V  G   S A T
Sbjct: 658 LDIVKVRCGSQFSIALT 674



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G  ++ R
Sbjct: 3193 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 3250

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3251 KPQVVEGLRGKKIVHVAVGALHCLAVT 3277



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3089 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3148

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3149 VKVLLGHRVIQVACG 3163



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 36/69 (52%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VDI+ G  H   ++  G +F WG     +LG G+  +  +P+LV AL  
Sbjct: 4088 RVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQG 4147

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4148 YRVIDIACG 4156



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325

Query: 474  V 474
            V
Sbjct: 3326 V 3326



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   K   ++D++ G+ H LA++   +V +WG+N   Q     +I   EP  +  L  K+
Sbjct: 704 LEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 38.9 bits (89), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H+V I+ G+ +  A++  G+++ WG  +  +LG G+  +   P LV  L    +  VS G
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 205/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4246 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4305

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4306 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4354

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4355 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4410

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4411 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4470

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4471 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4530

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4531 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4589

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4590 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4640



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 502 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 561

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 562 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 595



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3109 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3168

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3169 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3202



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2990 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3048

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3049 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3108

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3109 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3147



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4101 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4160

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4161 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4187



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4247 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4298



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3256 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3315

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3316 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3362



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3215 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3274

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3275 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3305



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 527 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 586

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 587 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 639



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4153 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4212

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4213 FSVALTKSG-AVYTWGKGDYHRLGHGS 4238



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3042 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3101

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3102 KTKRIRDIACGSSHSAALTS 3121



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4046 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4105

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4106 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4139



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 512 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 540



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3161 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3220

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3221 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3254



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 597 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 656

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 657 VIDVAAGSTHCLALT 671



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4044 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4103

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4104 GGAHSACVTA 4113



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4258 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4317

Query: 473  TV 474
            T+
Sbjct: 4318 TL 4319



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3194 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3251

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3252 KPQVVEGLRGKKIVHVAVGALHCLAVT 3278



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 608 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 667

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 668 LALTEDSE-VHSWGSND 683



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 496

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 497 KHVVHIACGSTYSAAITA 514



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 543 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 602

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 603 LDVVKVRCGSQFSIALT 619



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3090 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3149

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3150 VKVLLGHRVIQVACG 3164



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3267 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3326

Query: 474  V 474
            V
Sbjct: 3327 V 3327



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 649 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 708

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 709 IVGIACGPAQSFAWSS 724



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4088 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4147

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4148 HRVVDIACG 4156


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 205/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4300

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4301 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4349

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4350 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4405

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4406 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4465

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4466 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4525

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4526 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4584

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4585 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4635



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3164 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3197



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2985 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3043

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3044 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3104 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3142



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4096 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4155

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4156 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4182



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4242 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4293



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3311 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3357



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3269

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3270 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3300



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4148 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4207

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4208 FSVALTKSG-AVYTWGKGDYHRLGHGS 4233



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3037 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3096

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3097 KTKRIRDIACGSSHSAALTS 3116



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4100

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4101 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4134



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3156 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3215

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3216 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3249



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4099 GGAHSACVTA 4108



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4253 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4312

Query: 473  TV 474
            T+
Sbjct: 4313 TL 4314



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3189 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3246

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3247 KPQVVEGLRGKKIVHVAVGALHCLAVT 3273



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3144

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3145 VKVLLGHRVIQVACG 3159



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 474  V 474
            V
Sbjct: 3322 V 3322



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4083 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4142

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4143 HRVVDIACG 4151


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 134/423 (31%), Positives = 204/423 (48%), Gaps = 35/423 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 3995 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4054

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP  +P  Y HLQ   +  +R R
Sbjct: 4055 KKINRVACGSAHTLAWSTSK--PANAGK---------LPTQVPMEYNHLQEFLIIPLRNR 4103

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G +D+     +    +   +LR +   +       + V 
Sbjct: 4104 LLLLHHISELFCPCIPMFDLEGRLDETGQGPS----VGFDTLRGILISQGKEAAFRKVVQ 4159

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  +++      L LP R 
Sbjct: 4160 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMISFSPDSLLLPHRV 4219

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G  PLL+ TPNG  ++G NRD ++LNP   
Sbjct: 4220 WKVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTPNGRDESGANRDCFLLNPAAR 4279

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
             SL + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4280 SSLHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGLM 4338

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIA 415
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI 
Sbjct: 4339 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAIN 4390

Query: 416  CGF 418
              F
Sbjct: 4391 YRF 4393



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 2856 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2915

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 2916 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 2949



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2737 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 2795

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 2796 NYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 2855

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 2856 IACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNTTQLKP 2894



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T+ G LYT+G G YGRLGHG + +   P+ V AL    V  ++CG    
Sbjct: 3850 IAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDA 3909

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 3910 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 3936



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 3936 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3995

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 3996 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4047



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3003 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3062

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3063 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3109



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT ++ + P+ V  L    +  V+ G  H 
Sbjct: 2962 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHC 3021

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3022 LAVTDTGQ-VYAWGDNDHGQQGNGTTTVNRKP 3052



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H +A++  G++F+WG   D +LG  +++N  +P+L+ AL
Sbjct: 2789 RQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEAL 2848

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 2849 KTKRIRDIACGSSHSAAITS 2868



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 409  YYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y    IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V
Sbjct: 3897 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 3956

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             CG   +V +   G AVY +G G+Y +LG G+
Sbjct: 3957 ECGSQFSVALTKSG-AVYTWGKGDYHRLGHGS 3987



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  ++ G 
Sbjct: 3795 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGG 3854

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G  +Y +G G YG+LG G++   LKP
Sbjct: 3855 AHSACITAAGD-LYTWGKGRYGRLGHGDSEDQLKP 3888



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 3/86 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 2908 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 2967

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLG 497
             ++ +   G  V+ +G G+Y +LG G
Sbjct: 2968 FSLALTKSG-VVWTWGKGDYFRLGHG 2992



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  ++A
Sbjct: 3793 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAA 3852

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 3853 GGAHSACITA 3862



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4007 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4066

Query: 473  TV 474
            T+
Sbjct: 4067 TL 4068



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)

Query: 428 GYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G ++++G+GDYG+LG G +   K P+ +  L  + V  V CG   +V +   G+ VY++G
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ-VYSWG 467

Query: 488 DGEYGKLGLG 497
            G+  +LG G
Sbjct: 468 KGDNQRLGHG 477



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G  ++ R
Sbjct: 2941 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 2998

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 2999 KPQVVEGLRGKKIVHVAVGALHCLAVT 3025



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 2837 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 2896

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 2897 VKVLLGHRVIQVACG 2911



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3014 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3073

Query: 474  V 474
            V
Sbjct: 3074 V 3074



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 36/69 (52%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VDI+ G  H   ++  G ++ WG     +LG G+  +  +P+LV AL  
Sbjct: 3837 RVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQG 3896

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 3897 YRVIDIACG 3905



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 18/94 (19%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV------- 61
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+       
Sbjct: 436 IEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQATL 495

Query: 62  -----------LALSNKNIRQVSAGRSHSAAWTA 84
                        L  K+I  ++ G + S AW++
Sbjct: 496 PQANCLSKKXXXXLDTKHIVGIACGPAQSFAWSS 529



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L 
Sbjct: 447 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 492


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 205/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 3530 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 3589

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 3590 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 3638

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 3639 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 3694

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 3695 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 3754

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 3755 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 3814

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 3815 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 3873

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 3874 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 3924



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 2393 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2452

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 2453 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 2486



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2274 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 2332

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 2333 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 2392

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 2393 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 2431



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 3385 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 3444

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 3445 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 3471



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 3471 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3530

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 3531 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 3582



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 2540 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 2599

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 2600 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 2646



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 2499 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 2558

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 2559 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 2589



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 3437 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 3496

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 3497 FSVALTKSG-AVYTWGKGDYHRLGHGS 3522



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 2326 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 2385

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 2386 KTKRIRDIACGSSHSAALTS 2405



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 3330 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 3389

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 3390 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 3423



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 2445 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 2504

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 2505 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 2538



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 3328 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 3387

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 3388 GGAHSACVTA 3397



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 3542 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 3601

Query: 473  TV 474
            T+
Sbjct: 3602 TL 3603



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 2478 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2535

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 2536 KPQVVEGLRGKKIVHVAVGALHCLAVT 2562



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 2374 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 2433

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 2434 VKVLLGHRVIQVACG 2448



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 2551 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 2610

Query: 474  V 474
            V
Sbjct: 2611 V 2611



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 3372 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 3431

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 3432 HRVVDIACG 3440


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 205/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4300

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4301 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4349

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4350 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4405

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4406 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4465

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4466 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4525

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4526 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4584

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4585 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4635



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3164 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3197



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2985 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3043

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3044 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3104 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3142



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4096 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4155

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4156 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4182



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4242 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4293



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3311 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3357



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3269

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3270 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3300



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4148 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4207

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4208 FSVALTKSG-AVYTWGKGDYHRLGHGS 4233



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3037 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3096

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3097 KTKRIRDIACGSSHSAALTS 3116



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4100

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4101 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4134



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3156 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3215

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3216 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3249



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4099 GGAHSACVTA 4108



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4253 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4312

Query: 473  TV 474
            T+
Sbjct: 4313 TL 4314



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3189 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3246

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3247 KPQVVEGLRGKKIVHVAVGALHCLAVT 3273



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3144

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3145 VKVLLGHRVIQVACG 3159



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 474  V 474
            V
Sbjct: 3322 V 3322



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4083 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4142

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4143 HRVVDIACG 4151


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 205/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4183 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4242

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4243 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4291

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4292 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4347

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4348 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4407

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4408 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4467

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4468 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4526

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4527 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4577



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3097 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3156

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3157 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3190



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2978 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3036

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3037 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3096

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3097 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3135



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4038 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4097

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4098 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4124



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4124 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4183

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4184 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4235



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3244 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3303

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3304 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3350



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3203 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3262

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3263 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3293



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHG 692



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4090 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4149

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4150 FSVALTKSG-AVYTWGKGDYHRLGHGS 4175



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3030 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3089

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3090 KTKRIRDIACGSSHSAALTS 3109



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 3983 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4042

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4043 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4076



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3149 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3208

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3209 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3242



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 3981 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4040

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4041 GGAHSACVTA 4050



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4195 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4254

Query: 473  TV 474
            T+
Sbjct: 4255 TL 4256



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3182 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3239

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3240 KPQVVEGLRGKKIVHVAVGALHCLAVT 3266



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3255 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3314

Query: 474  V 474
            V
Sbjct: 3315 V 3315



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3078 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3137

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3138 VKVLLGHRVIQVACG 3152



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4025 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4084

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4085 HRVVDIACG 4093


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 205/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4300

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4301 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4349

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4350 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4405

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4406 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4465

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4466 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4525

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4526 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4584

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4585 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4635



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3164 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3197



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2985 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3043

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3044 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3104 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3142



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4096 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4155

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4156 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4182



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4242 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4293



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3311 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3357



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3269

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3270 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3300



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4148 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4207

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4208 FSVALTKSG-AVYTWGKGDYHRLGHGS 4233



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3037 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3096

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3097 KTKRIRDIACGSSHSAALTS 3116



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4100

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4101 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4134



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3156 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3215

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3216 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3249



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4099 GGAHSACVTA 4108



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4253 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4312

Query: 473  TV 474
            T+
Sbjct: 4313 TL 4314



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3189 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3246

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3247 KPQVVEGLRGKKIVHVAVGALHCLAVT 3273



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3144

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3145 VKVLLGHRVIQVACG 3159



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 474  V 474
            V
Sbjct: 3322 V 3322



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4083 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4142

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4143 HRVVDIACG 4151


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 205/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4300

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4301 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4349

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4350 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4405

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4406 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4465

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4466 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4525

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4526 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4584

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4585 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4635



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3164 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3197



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2985 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3043

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3044 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3104 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3142



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4096 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4155

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4156 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4182



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4242 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4293



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3311 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3357



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3269

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3270 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3300



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4148 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4207

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4208 FSVALTKSG-AVYTWGKGDYHRLGHGS 4233



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3037 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3096

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3097 KTKRIRDIACGSSHSAALTS 3116



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4100

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4101 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4134



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3156 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3215

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3216 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3249



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4099 GGAHSACVTA 4108



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4253 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4312

Query: 473  TV 474
            T+
Sbjct: 4313 TL 4314



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3189 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3246

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3247 KPQVVEGLRGKKIVHVAVGALHCLAVT 3273



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3144

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3145 VKVLLGHRVIQVACG 3159



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 474  V 474
            V
Sbjct: 3322 V 3322



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4083 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4142

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4143 HRVVDIACG 4151


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 205/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4300

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4301 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4349

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4350 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4405

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4406 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4465

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4466 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4525

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4526 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4584

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4585 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4635



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3164 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3197



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2985 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3043

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3044 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3104 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3142



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4096 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4155

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4156 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4182



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4242 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4293



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3311 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3357



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3269

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3270 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3300



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4148 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4207

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4208 FSVALTKSG-AVYTWGKGDYHRLGHGS 4233



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3037 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3096

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3097 KTKRIRDIACGSSHSAALTS 3116



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4100

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4101 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4134



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3156 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3215

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3216 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3249



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4099 GGAHSACVTA 4108



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4253 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4312

Query: 473  TV 474
            T+
Sbjct: 4313 TL 4314



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3189 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3246

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3247 KPQVVEGLRGKKIVHVAVGALHCLAVT 3273



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3144

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3145 VKVLLGHRVIQVACG 3159



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 474  V 474
            V
Sbjct: 3322 V 3322



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4083 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4142

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4143 HRVVDIACG 4151


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 203/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 3879 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 3938

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P    HLQ  P+  +R R
Sbjct: 3939 KKVNRVACGSAHTLAWSTS---------KPTSAGKL--PAQVPMECNHLQEIPITALRNR 3987

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV-HPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L    + W+  T     V   +LR +   +       + V 
Sbjct: 3988 LLLLHHISELFCPCIPMFDL----EGWLDETGLGPSVGFDALRGILISQGKEAAFRKVVQ 4043

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4044 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4103

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4104 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4163

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4164 APVHSSM-FRFLGVLLGIAIRTGSPLSLSLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4222

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4223 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLENRAEYVRLAI 4273



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 245 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 304

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 305 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 338



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 2742 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2801

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 2802 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNVPQ 2835



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2623 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSG-TVPIPRQITALS 2681

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 2682 SYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 2741

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 2742 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 2780



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 3734 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 3793

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 3794 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 3820



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GDY RLGHG+  + + P +V  L    V +++ G  H 
Sbjct: 3840 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHC 3899

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 3900 VCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 3931



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 2889 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 2948

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 2949 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 2995



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 2848 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 2907

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 2908 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 2938



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 270 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 329

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 330 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 382



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 3786 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQ 3845

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 3846 FSVALTKSG-AVYTWGKGDYHRLGHGS 3871



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 2675 RQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 2734

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 2735 KTKRIRDIACGSSHSAALTS 2754



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG+      P  + +L  + V  V+ G 
Sbjct: 3679 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGG 3738

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 3739 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 3772



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 195 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAA 254

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 255 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 283



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    VP+ +  LN   V  + CG  
Sbjct: 2794 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQ 2853

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 2854 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 2887



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 340 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 399

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 400 VIDVAAGSTHCLALT 414



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 3891 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 3950

Query: 473  TV 474
            T+
Sbjct: 3951 TL 3952



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG G++     P+++ +L    +  V+A
Sbjct: 3677 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAA 3736

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 3737 GGAHSACVTA 3746



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 351 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 410

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 411 LALTEDSE-VHSWGSND 426



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G ++P  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 2827 GSEGCNVP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2884

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 2885 KPQVVEGLRGKKIVHVAVGALHCLAVT 2911



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 2723 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 2782

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 2783 VKVLLGHRVIQVACG 2797



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 286 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 345

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 346 LDVVKVRCGSQFSIALT 362



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 2900 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 2959

Query: 474  V 474
            V
Sbjct: 2960 V 2960



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+ + A S     
Sbjct: 180 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAG 239

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 240 KHVVHIACGSTYSAAITA 257



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 392 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 451

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 452 IVGIACGPAQSFAWSS 467



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 3721 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 3780

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 3781 HRVVDIACG 3789


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 207/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 3988 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4047

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4048 KKVNRVACGSAHTLAWST---------SKPASAGKL--PAQVPMEYNHLQEIPIIALRNR 4096

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4097 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4152

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4153 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4212

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4213 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4272

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4273 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4331

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4332 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4382



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 3843 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 3902

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 3903 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 3929



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 3929 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3988

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 3989 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4040



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 2853 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2912

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLG 497
             T+ + D+G  V++ GDG+  K+G G
Sbjct: 2913 QTLALTDEG-LVFSLGDGDLWKIGPG 2937



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 2/93 (2%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC-GLNH 472
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    + + SC G  H
Sbjct: 2960 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALH 3019

Query: 473  TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3020 CLAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3051



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIP---LECFEGASWTGRITPIVTGGQSVPLTFANRL 407
            ++++L A+  + ++G +++ F   +      C E   W      I +G   +P      L
Sbjct: 2736 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITAL 2795

Query: 408  QYY---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
              Y   + A+  G   +     +G ++++G GD G+LGH + M    P  + AL    + 
Sbjct: 2796 SSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRM----PRLIEALKTKRIR 2851

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
             ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 2852 DIACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 2891



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 9    IPAFKNIHIVDISV-GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
            +   +   IV  S  G  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  +
Sbjct: 3001 VEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQ 3060

Query: 68   NIRQVSAGRSHSAAWT 83
             I +V+ G SHS AWT
Sbjct: 3061 KITRVACGSSHSVAWT 3076



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 3895 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 3954

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 3955 FSVALTKSG-AVYTWGKGDYHRLGHGS 3980



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 3788 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 3847

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 3848 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 3881



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 3786 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 3845

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 3846 GGAHSACVTA 3855



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4000 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4059

Query: 473  TV 474
            T+
Sbjct: 4060 TL 4061



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++V  L  
Sbjct: 2840 RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG 2899

Query: 67   KNIRQVSAG 75
              + QV+ G
Sbjct: 2900 HRVIQVACG 2908



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 4/51 (7%)

Query: 34   GQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
            G+VF+WG   D +LG  +    R P+L+ AL  K IR ++ G SHSAA T+
Sbjct: 2819 GKVFSWGEGDDGKLGHFS----RMPRLIEALKTKRIRDIACGSSHSAALTS 2865



 Score = 45.4 bits (106), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 413  AIAC-GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            A +C G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +
Sbjct: 3011 ACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3070

Query: 472  HTV 474
            H+V
Sbjct: 3071 HSV 3073



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 3830 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 3889

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 3890 HRVVDIACG 3898



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS-AG 75
            +  I  G +  LA++ +G V+ WG     +LG G+ ++ R+PQ+V  L  K I   S +G
Sbjct: 2957 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSG 3016

Query: 76   RSHSAAWT 83
              H  A T
Sbjct: 3017 ALHCLAVT 3024


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 203/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4181 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4240

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P    HLQ  P+  +R R
Sbjct: 4241 KKVNRVACGSAHTLAWSTS---------KPTSAGKL--PAQVPMECNHLQEIPITALRNR 4289

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV-HPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L    + W+  T     V   +LR +   +       + V 
Sbjct: 4290 LLLLHHISELFCPCIPMFDL----EGWLDETGLGPSVGFDALRGILISQGKEAAFRKVVQ 4345

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4346 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4405

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4406 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4465

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4466 APVHSSM-FRFLGVLLGIAIRTGSPLSLSLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4524

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4525 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLENRAEYVRLAI 4575



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3044 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3103

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3104 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNVPQ 3137



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2925 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 2983

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 2984 SYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3043

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3044 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3082



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4036 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4095

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4096 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4122



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4122 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4181

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4182 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4233



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3191 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3250

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3251 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3297



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3150 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3209

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3210 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3240



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+Y RL HG +   ++   +  L++      SCG+   
Sbjct: 487 IACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFA 546

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+   + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 547 QTLAFYENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 580



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4088 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4147

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4148 FSVALTKSG-AVYTWGKGDYHRLGHGS 4173



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 2977 RQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3036

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3037 KTKRIRDIACGSSHSAALTS 3056



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG+      P  + +L  V V  V+ G 
Sbjct: 3981 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGG 4040

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4041 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4074



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    VP+ +  LN   V  + CG  
Sbjct: 3096 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQ 3155

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3156 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3189



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 1/94 (1%)

Query: 405 NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
           +R ++   +    F  +     NG ++++G+GDYG+LG G +   K P+ +  L  + V 
Sbjct: 532 DRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVV 591

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 592 KVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 624



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 582 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 641

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 642 VIDVAAGSTHCLALT 656



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4193 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4252

Query: 473  TV 474
            T+
Sbjct: 4253 TL 4254



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 5/86 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 437 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 496

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGL 501
           I  +G+ +Y +G G Y +L  G + +
Sbjct: 497 ITAEGE-LYTWGRGNYXRLDHGRSAM 521



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG G++     P+++ +L    +  V+A
Sbjct: 3979 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAA 4038

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4039 GGAHSACVTA 4048



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 593 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 652

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 653 LALTEDSE-VHSWGSND 668



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G ++P  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3129 GSEGCNVP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3186

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3187 KPQVVEGLRGKKIVHVAVGALHCLAVT 3213



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 422 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 481

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 482 KHVVHIACGSTYSAAITA 499



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3025 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3084

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3085 VKVLLGHRVIQVACG 3099



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3202 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3261

Query: 474  V 474
            V
Sbjct: 3262 V 3262



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 634 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 693

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 694 IVGIACGPAQSFAWSS 709



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + + +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4023 RVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4082

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4083 HRVVDIACG 4091


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  S  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4244 RQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4303

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4304 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPVQVPMEYNHLQEIPIIALRNR 4352

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4353 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4408

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4409 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMTSFSPDSLLLPHRV 4468

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ +P   
Sbjct: 4469 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFSPAAR 4528

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4529 APVHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4587

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4588 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 4638



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3165 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3198



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2986 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3044

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3105 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3143



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 4099 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDA 4158

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4159 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4185



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC ++ G+ VY +GD + G+LG G T     P+
Sbjct: 4245 QVQGLQGKKVIAIATGSLHCVCCSEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4296



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3312 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3358



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3270

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3271 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 3301



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   +V +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4151 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4210

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4211 FSVALTKSG-AVYTWGKGDYHRLGHGS 4236



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3038 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3097

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3098 KTKRIRDIACGSSHSAALTS 3117



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L    V  V+ G 
Sbjct: 4044 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGG 4103

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4104 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4137



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3157 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3217 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3250



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAA 4101

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4102 GGAHSACVTA 4111



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    + +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4256 AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4315

Query: 473  TV 474
            T+
Sbjct: 4316 TL 4317



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3190 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVT 3274



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVVKVRCGSQFSVALT 674



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3146 VKVLLGHRVIQVACG 3160



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 474  V 474
            V
Sbjct: 3323 V 3323



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 34/69 (49%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + +   +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4086 RVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4145

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 4146 HRVVDVACG 4154


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 206/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  S  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4242 RQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4301

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4302 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PVQVPMEYNHLQEIPIIALRNR 4350

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4351 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4406

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4407 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMTSFSPDSLLLPHRV 4466

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ +P   
Sbjct: 4467 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFSPAAR 4526

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4527 APVHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4585

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4586 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 4636



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3103 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3162

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3163 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3196



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2984 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3042

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3043 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3102

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3103 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3141



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 4097 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDA 4156

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4157 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4183



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4183 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4242

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC ++ G+ VY +GD + G+LG G T     P+
Sbjct: 4243 QVQGLQGKKVIAIATGSLHCVCCSEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4294



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3250 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3309

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3310 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3356



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3209 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3268

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3269 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 3299



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   +V +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4149 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4208

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4209 FSVALTKSG-AVYTWGKGDYHRLGHGS 4234



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3036 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3095

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3096 KTKRIRDIACGSSHSAALTS 3115



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L    V  V+ G 
Sbjct: 4042 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGG 4101

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4102 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4135



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3155 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3214

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3215 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3248



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4040 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAA 4099

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4100 GGAHSACVTA 4109



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    + +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4254 AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4313

Query: 473  TV 474
            T+
Sbjct: 4314 TL 4315



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3188 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3245

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3246 KPQVVEGLRGKKIVHVAVGALHCLAVT 3272



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVVKVRCGSQFSVALT 674



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3084 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3143

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3144 VKVLLGHRVIQVACG 3158



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3261 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3320

Query: 474  V 474
            V
Sbjct: 3321 V 3321



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 34/69 (49%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + +   +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4084 RVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4143

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 4144 HRVVDVACG 4152


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 203/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4132 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4191

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4192 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4240

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4241 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4296

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4297 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4356

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ NP   
Sbjct: 4357 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFNPAAR 4416

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4417 APVHGGM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4475

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4476 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 4526



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3165 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3198



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2986 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSG-TVPIPRQITALS 3044

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3105 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3143



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V  L    V  ++CG    
Sbjct: 3987 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDA 4046

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4047 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4073



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4073 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4132

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4133 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4184



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4039 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4098

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4099 FSVALTKSG-AVYTWGKGDYHRLGHGS 4124



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3038 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3097

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3098 KTKRIRDIACGSSHSAALTS 3117



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 3932 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 3991

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 3992 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4025



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ ++ +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 3930 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 3989

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 3990 GGAHSACVTA 3999



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4144 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4203

Query: 473  TV 474
            T+
Sbjct: 4204 TL 4205



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3146 VKVLLGHRVIQVACG 3160



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3157 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216

Query: 472  HTVCIADKG 480
             ++ +   G
Sbjct: 3217 FSLALTKSG 3225



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVIKVRCGSQFSIALT 674



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 42.0 bits (97), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 34/69 (49%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV  L  
Sbjct: 3974 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQG 4033

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4034 HRVVDIACG 4042


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 204/418 (48%), Gaps = 33/418 (7%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4245 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4304

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4305 KKVNRVACGSAHTLAWST---------SKPTSTGKL--PAQVPMEYNHLQEIPMIALRNR 4353

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+  S+L    +   P+ ++D    +      +   +LR +   +       + V  
Sbjct: 4354 LLLLHHISELFCPCI---PMFDLDGCLHETGLGPSVGFDTLRGILISQGKEAAFRKVVQA 4410

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R W
Sbjct: 4411 TMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSAFSPDSLLLPHRVW 4470

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P    
Sbjct: 4471 KVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAARA 4530

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
             + + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L  
Sbjct: 4531 PVHTSM-FRFLGVLLGIAIRTGSPLSLSLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMY 4589

Query: 358  IRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4590 IRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4639



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3106 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3165

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3166 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3199



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 40/222 (18%)

Query: 301  SLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTL---------- 350
            SLM  K  G+     IRTK          VW            L D D L          
Sbjct: 2944 SLMRKKAAGLESAATIRTK--------VFVW-----------GLNDKDQLGGLKGSKIKV 2984

Query: 351  --YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TF 403
              ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T 
Sbjct: 2985 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSG-TVPIPRQITA 3043

Query: 404  ANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
             +     + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +
Sbjct: 3044 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRI 3103

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
              ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3104 RDIACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3144



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4100 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4159

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4160 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4186



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4186 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4245

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4246 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4297



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 44/75 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3253 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3312

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3313 ITRVACGSSHSVAWT 3327



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3212 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3271

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3272 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 3302



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4152 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4211

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4212 FSVALTKSG-AVYTWGKGDYHRLGHGS 4237



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
           L+  + A   G   +  VT NG ++++G+GDYG+LG G +   K P+ +  L  + V  V
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKV 663

Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 664 RCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3039 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3098

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3099 KTKRIRDIACGSSHSAAITS 3118



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  V +L  + V  V+ G 
Sbjct: 4045 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGG 4104

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4105 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4138



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3158 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3217

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G  V+ +G G+Y +LG G+
Sbjct: 3218 FSLALTKSG-VVWTWGKGDYFRLGHGS 3243



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 5/84 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNT 499
           I  +G+ +Y +G G YG+LG G++
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSS 589



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P++V +L    +  V+A
Sbjct: 4043 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAA 4102

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4103 GGAHSACVTA 4112



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4257 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4316

Query: 473  TV 474
            T+
Sbjct: 4317 TL 4318



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3191 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3248

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3249 KPQVVEGLRGKKIVHVAVGALHCLAVT 3275



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3087 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3146

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3147 VKVLLGHRVIQVACG 3161



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVVKVRCGSQFSIALT 674



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3264 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3323

Query: 474  V 474
            V
Sbjct: 3324 V 3324



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4087 RVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4146

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4147 HRVVDIACG 4155


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 206/419 (49%), Gaps = 35/419 (8%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 490 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 549

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
           K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 550 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 598

Query: 127 LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
           L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 599 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 654

Query: 186 KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 655 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 714

Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
           WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ +P   
Sbjct: 715 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFSPAAR 774

Query: 297 ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
             + + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 775 APVHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 833

Query: 357 AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 834 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 884



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 345 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDA 404

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            T+C+ D    V+++GDG+YGKLG G +
Sbjct: 405 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 431



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 431 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 490

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 491 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 542



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 397 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 456

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +V +   G AVY +G G+Y +LG G+
Sbjct: 457 FSVALTKSG-AVYTWGKGDYHRLGHGS 482



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 290 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 349

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H+ C+   G  +Y +G G YG+LG  ++  +  P+
Sbjct: 350 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKPK 384



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 288 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 347

Query: 75  GRSHSAAWTA 84
           G +HSA  TA
Sbjct: 348 GGAHSACVTA 357



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 502 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 561

Query: 473 TV 474
           T+
Sbjct: 562 TL 563



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 332 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 391

Query: 67  KNIRQVSAG 75
             +  V+ G
Sbjct: 392 HRVVDVACG 400


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
            magnipapillata]
          Length = 2284

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/345 (33%), Positives = 181/345 (52%), Gaps = 24/345 (6%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            + A  N  +  IS G+ H +  ++ G+V+ WG+N + QLG G  I  + P L   L NK 
Sbjct: 1733 VTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKK 1792

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLK 128
            I ++S G +H+ AW+           T  +S R  LP ++P  Y +L++ P+  +R R  
Sbjct: 1793 IDRISCGSAHTIAWS-----------TSKASERRSLPLEVPVEYNNLKHLPMNALRDRAF 1841

Query: 129  LLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGKTM 188
            LLN FS LI     LL L  V QD    T     +  SLR +         + + +  T 
Sbjct: 1842 LLNSFSKLICLCFPLLDL--VPQD----TDVEEPMINSLRRIILFSFKESIMRKVIESTS 1895

Query: 189  LVGKNFGPSVTVRRLTT----KSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            +  +  GP V + R+      +     + +FAQ++  + +      RLP+R WKVK +GE
Sbjct: 1896 IRDQQHGPVVQLNRVVKHRQLRGSNINQSLFAQLAWLINEFPSDSFRLPNRMWKVKFVGE 1955

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE-SLQSLM 303
              DD GG F +++ E+C EL +G++P+L+ TPN V +   + D ++LNP L   + + L 
Sbjct: 1956 SVDDCGGGFSESLAEICEELRNGSLPILLPTPNNVEENDQDYDCFMLNPGLKHPNARDL- 2014

Query: 304  HFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDND 348
             F+F GIL G+A+RT  P+ L L+  +WKL+V   +T  D+ D D
Sbjct: 2015 -FRFFGILLGIAVRTGHPMSLNLAEPMWKLLVGSNITLEDIGDMD 2058



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           I+CG  HSA +  N YLYT+G GD+GRLGHG       P+ V      +V  VSCG    
Sbjct: 703 ISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDA 762

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            TVCI D  K V+++GDG++GKLG G +
Sbjct: 763 QTVCITDDDK-VWSWGDGDFGKLGRGGS 789



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 1/112 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T  G LYT+G GDY RLGHGT  + + P 
Sbjct: 1672 SDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPM 1731

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             V AL    V S+SCG  H V   D+G+ VY +GD + G+LG G    + TP
Sbjct: 1732 MVTALFNKIVTSISCGSLHCVVCTDEGE-VYCWGDNDEGQLGDGTIIARQTP 1782



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +  H++DI+VG  H LAV+  G+VF+WG+N   QLG G     + P L+  L N  
Sbjct: 850 VEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHNHR 909

Query: 69  IRQVSAGRSHSAAWT 83
           I+ V+ G SHS AWT
Sbjct: 910 IKYVACGSSHSIAWT 924



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            I  G  HSA +  NG LYT+G G YGRLGHG + +   P++V AL    V  V+CG    
Sbjct: 1586 ICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDA 1645

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+CI +    V+++GDG+YGKLG G +
Sbjct: 1646 QTLCITNDDN-VWSWGDGDYGKLGRGGS 1672



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 1/94 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
             I CG + +  +T  G ++T+G GD+ RLGHGT ++ + P+ V  L   HV  ++ G  
Sbjct: 807 CKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGAL 866

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H + +   G+ V+++GD ++G+LG G T +K  P
Sbjct: 867 HCLAVTQDGE-VFSWGDNDHGQLGTGETDVKKVP 899



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 5/115 (4%)

Query: 393 VTGGQSVP--LTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK 450
           +TG  + P  +T  N+L   + ++  G  H   +TS+G  +++G+G+ G+LGHG  M+  
Sbjct: 628 ITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCS 687

Query: 451 VPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            P  + A     V  +SCG  H+  I +  K +Y +G G++G+LG G+  T L+P
Sbjct: 688 KPHLIEAFVGKIVTDISCGSAHSAAIVE-NKYLYTWGLGDFGRLGHGDEETILQP 741



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 4    TSGRHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
            TS R + + K+I+I  ISV  G  H LA+S+ G+VF+WG   D +LG GN+    +P+ +
Sbjct: 1516 TSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRI 1575

Query: 62   LALSNKNIRQVSAGRSHSAA 81
                 K I  + AG SHSAA
Sbjct: 1576 EFFCGKIITNICAGGSHSAA 1595



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%)

Query: 4   TSGRHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           TS R +     + +  +SV  G  HV+A+++ G  F+WG+  + QLG GN ++  +P L+
Sbjct: 633 TSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLI 692

Query: 62  LALSNKNIRQVSAGRSHSAA 81
            A   K +  +S G +HSAA
Sbjct: 693 EAFVGKIVTDISCGSAHSAA 712



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 1/94 (1%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++  G +H   ++S+G ++++G G+ G+LGHG       P+R+       + ++  G +H
Sbjct: 1533 SVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSH 1592

Query: 473  TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +  I   G+ +Y +G G YG+LG G++  +  P+
Sbjct: 1593 SAAIGLNGE-LYTWGKGRYGRLGHGDSDDQLKPK 1625



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESVSC--GL 470
           IA G K +  +T+ G LY+ G   +G+LG G  T N   P  V  LN++ V  VS   G 
Sbjct: 596 IAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGG 655

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           NH + +   G A +++GDGE G+LG GN
Sbjct: 656 NHVMALTSDGLA-FSWGDGENGQLGHGN 682



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 4/94 (4%)

Query: 407  LQYY---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            LQ++   + A   G   +  +T++  ++++G+GDYG+LG G +   KVP  +  L+   +
Sbjct: 1630 LQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGI 1689

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              V CG   ++ +   G  +Y +G G+Y +LG G
Sbjct: 1690 VKVECGSQFSMALTKYG-VLYTWGKGDYYRLGHG 1722



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 3/100 (3%)

Query: 400 PLTFANRLQYYEAAIACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           P    + L Y    ++CG +   +  +T +  ++++G+GD+G+LG G +    +P  V  
Sbjct: 741 PKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLIPVEVEQ 800

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           L  + +  + CG   TV +   G  V+ +G G++ +LG G
Sbjct: 801 LRGLQICKILCGAQFTVALTKTG-TVWTWGKGDFYRLGHG 839



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 9/75 (12%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G  H   VT +G ++++G+ D+G+LG G T   KVP  +  L+   ++ V+CG +H+
Sbjct: 861 IAVGALHCLAVTQDGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHS 920

Query: 474 V---------CIADK 479
           +         CI DK
Sbjct: 921 IAWTEITTSACIIDK 935



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
             +I+CG  H  V T  G +Y +G+ D G+LG GT +  + P     L    ++ +SCG  
Sbjct: 1742 TSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSA 1801

Query: 472  HTV 474
            HT+
Sbjct: 1802 HTI 1804



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
            +   + + I  I  G +  +A++ TG V+ WG     +LG G  I+ R+P+LV  L  K
Sbjct: 797 EVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRGK 856

Query: 68  NIRQVSAGRSHSAAWT 83
           ++  ++ G  H  A T
Sbjct: 857 HVIDIAVGALHCLAVT 872



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 7/105 (6%)

Query: 405  NRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            N L+ +   I C    +  +T++G L +  G G+ G+LG G +     P  + ++  +++
Sbjct: 1473 NLLKEHNVKIDCD---TVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINI 1529

Query: 464  E--SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +  SV  G  H + ++  G+ V+++G+GE GKLG GN      P+
Sbjct: 1530 KKISVHSGGRHCLALSSDGE-VFSWGEGEDGKLGHGNRQTSSQPK 1573



 Score = 42.0 bits (97), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 7    RHIPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            + + A +   ++D++ G+     L ++N   V++WG+    +LG G     + P ++  L
Sbjct: 1625 KQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDL 1684

Query: 65   SNKNIRQVSAGRSHSAAWT 83
            S K I +V  G   S A T
Sbjct: 1685 SGKGIVKVECGSQFSMALT 1703



 Score = 42.0 bits (97), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 35/75 (46%)

Query: 1   MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
           MS +    I AF    + DIS G+ H  A+     ++ WG     +LG G++    +P+ 
Sbjct: 684 MSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEETILQPKF 743

Query: 61  VLALSNKNIRQVSAG 75
           V      N+ QVS G
Sbjct: 744 VTHFLGYNVVQVSCG 758


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4244 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4303

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4304 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4352

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4353 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4408

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4409 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4468

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ +P   
Sbjct: 4469 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFSPAAR 4528

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4529 APVHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4587

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4588 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 4638



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3165 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3198



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2986 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSG-TVPIPRQITALS 3044

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3105 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3143



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 4099 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDA 4158

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4159 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4185



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4245 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4296



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3312 ITRVACGSSHSVAWTTIDVATPSVHEPVLFQTARDPLGASYLGVPSD 3358



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3270

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3271 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 3301



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4151 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4210

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4211 FSVALTKSG-AVYTWGKGDYHRLGHGS 4236



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3038 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3097

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3098 KTKRIRDIACGSSHSAALTS 3117



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4044 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4103

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4104 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4137



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3157 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3217 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3250



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4101

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4102 GGAHSACVTA 4111



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4256 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4315

Query: 473  TV 474
            T+
Sbjct: 4316 TL 4317



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3190 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVT 3274



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3146 VKVLLGHRVIQVACG 3160



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVVKVRCGSQFSIALT 674



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 474  V 474
            V
Sbjct: 3323 V 3323



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4086 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4145

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 4146 HRVVDVACG 4154



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 206/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4221 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4280

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4281 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 4329

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4330 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4385

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4386 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4445

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ +P   
Sbjct: 4446 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFSPAAR 4505

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4506 APVHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4564

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4565 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 4615



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 534 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 593

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 594 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 627



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3082 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3141

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3142 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3175



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2963 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3021

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3022 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3081

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3082 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3120



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 4076 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDA 4135

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4136 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4162



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4162 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4221

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4222 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4273



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3229 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3288

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3289 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3335



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3188 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3247

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3248 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 3278



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 559 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 618

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 619 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 671



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4128 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4187

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4188 FSVALTKSG-AVYTWGKGDYHRLGHGS 4213



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3015 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3074

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3075 KTKRIRDIACGSSHSAALTS 3094



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4021 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4080

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4081 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4114



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 484 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 543

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 544 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 572



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3134 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3193

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3194 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3227



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 629 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 688

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 689 VIDVAAGSTHCLALT 703



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4019 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4078

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4079 GGAHSACVTA 4088



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4233 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4292

Query: 473  TV 474
            T+
Sbjct: 4293 TL 4294



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3167 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3224

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3225 KPQVVEGLRGKKIVHVAVGALHCLAVT 3251



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 640 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 699

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 700 LALTEDSE-VHSWGSND 715



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 469 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 528

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 529 KHVVHIACGSTYSAAITA 546



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3063 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3122

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3123 VKVLLGHRVIQVACG 3137



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 575 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 634

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 635 LDVVKVRCGSQFSIALT 651



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3240 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3299

Query: 474  V 474
            V
Sbjct: 3300 V 3300



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4063 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4122

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 4123 HRVVDVACG 4131



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 681 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 740

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 741 IVGIACGPAQSFAWSS 756


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 206/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4244 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4303

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4304 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 4352

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4353 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4408

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4409 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4468

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ +P   
Sbjct: 4469 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFSPAAR 4528

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4529 APVHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4587

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4588 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 4638



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3165 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3198



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2986 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3044

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3105 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3143



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 4099 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDA 4158

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4159 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4185



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4245 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4296



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3312 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3358



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3270

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3271 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 3301



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4151 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4210

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4211 FSVALTKSG-AVYTWGKGDYHRLGHGS 4236



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3038 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3097

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3098 KTKRIRDIACGSSHSAALTS 3117



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4044 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4103

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4104 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4137



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3157 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3217 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3250



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4101

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4102 GGAHSACVTA 4111



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4256 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4315

Query: 473  TV 474
            T+
Sbjct: 4316 TL 4317



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3190 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVT 3274



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3146 VKVLLGHRVIQVACG 3160



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVVKVRCGSQFSIALT 674



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 474  V 474
            V
Sbjct: 3323 V 3323



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4086 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4145

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 4146 HRVVDVACG 4154



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  S  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4243 RQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4302

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4303 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPVQVPMEYNHLQEIPIIALRNR 4351

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4352 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4407

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4408 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4467

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ +P   
Sbjct: 4468 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFSPAAR 4527

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4528 APVHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGLM 4586

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4587 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 4637



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3165 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3198



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2986 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3044

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3105 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3143



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 4098 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDA 4157

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4158 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4184



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC ++ G+ VY +GD + G+LG G T     P+
Sbjct: 4244 QVQGLQGKKVIAIATGSLHCVCCSEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4295



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3312 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3358



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3270

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3271 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 3301



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4150 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4209

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4210 FSVALTKSG-AVYTWGKGDYHRLGHGS 4235



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3038 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3097

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3098 KTKRIRDIACGSSHSAALTS 3117



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L    V  V+ G 
Sbjct: 4043 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGG 4102

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4103 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4136



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3157 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3217 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3250



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAA 4100

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4101 GGAHSACVTA 4110



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    + +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4255 AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4314

Query: 473  TV 474
            T+
Sbjct: 4315 TL 4316



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3190 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVT 3274



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3146 VKVLLGHRVIQVACG 3160



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVVKVRCGSQFSIALT 674



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 474  V 474
            V
Sbjct: 3323 V 3323



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 34/69 (49%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + +   +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4085 RVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4144

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 4145 HRVVDVACG 4153


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 200/418 (47%), Gaps = 33/418 (7%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4229 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4288

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP  +P  Y HLQ   +  +R R
Sbjct: 4289 KKINRVACGSAHTLAWSTSK--PTNAGK---------LPAQVPMEYNHLQEISIMALRNR 4337

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+  S+L    +   P+ +++    Q      +   +LR +   +       + V  
Sbjct: 4338 LLLLHHISELFCPCI---PMFDLEGRLGQTGHGPSVGFDTLRGILISQGKEAAFRKVVQA 4394

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R W
Sbjct: 4395 TMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRVW 4454

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK +GE  DD GG + ++I EMC EL +G  PLL+ TPNG  ++G NRD ++LNP    
Sbjct: 4455 KVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTPNGRDESGANRDCFLLNPAAKS 4514

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
             L   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +  SL  
Sbjct: 4515 PLHMSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPSLMY 4573

Query: 358  IRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD       EA   E   +   F   + +G+   I    +   +T  NR +Y   AI
Sbjct: 4574 IRD------NEATAEEFEAMTLPFTVPNASGQ--DIQLSSKYSHITLENRAEYVRLAI 4623



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SAV+T +G LYT+G G+YGRLGHG++ +   P  V AL  + V  V+CG    
Sbjct: 542 IACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDA 601

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 602 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 635



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LY++G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3090 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDA 3149

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3150 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3183



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T++G L+T+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 4084 IAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDA 4143

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4144 QTLCLTDD-DMVWSWGDGDYGKLGRGGS 4170



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 90/161 (55%), Gaps = 7/161 (4%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G ++P+    T  +
Sbjct: 2971 FSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSG-TIPIPRQITALS 3029

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3030 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3089

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            ++CG +H+  I   G+ +Y++G GEYG+LG G+   +  P+
Sbjct: 3090 IACGSSHSAAITSSGE-LYSWGLGEYGRLGHGDNATQLRPK 3129



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  +P+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4170 SDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4229

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4230 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4281



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT ++ + P+ V  L    +  V+ G  H 
Sbjct: 3196 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHC 3255

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3256 LAVTDTGQ-VYAWGDNDHGQQGNGTTTVNRKP 3286



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3237 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3296

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3297 ITRVACGSSHSVAWT 3311



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H +A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3023 RQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3082

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3083 KTKRIRDIACGSSHSAAITS 3102



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPL--TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q+ P+  T    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 567 GRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 626

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ V  L  + +  V CG   +V +   G+ VY +G G+  +LG G
Sbjct: 627 GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQ-VYTWGKGDNQRLGHG 678



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  V V  ++ G 
Sbjct: 4029 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGG 4088

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G+ ++ +G G YG+LG G++   LKP
Sbjct: 4089 AHSACITASGE-LFTWGKGRYGRLGHGDSEDQLKP 4122



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   K+P ++ +L  + V  V CG  
Sbjct: 4136 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQ 4195

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4196 FSVALTKSG-AVYTWGKGDYHRLGHGS 4221



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 5/91 (5%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTV 474
           +H   ++SNG ++++G GD GRLGHG     + P  + A N      HV  ++CG  ++ 
Sbjct: 491 QHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSA 550

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            I   G+ +Y +G G YG+LG G++  + TP
Sbjct: 551 VITIDGE-LYTWGRGNYGRLGHGSSEDQTTP 580



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3142 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3201

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G       PQ
Sbjct: 3202 FSLALTKSG-VVWTWGKGDYFRLGHGTDVHVRKPQ 3235



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +YT+G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 648 VCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHC 707

Query: 474 VCIADKGKAVYAFGDGE 490
           + + D G+ V+++G  +
Sbjct: 708 LALTDDGE-VHSWGSND 723



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  ++A
Sbjct: 4027 IRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAA 4086

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4087 GGAHSACITA 4096



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4241 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4300

Query: 473  TV 474
            T+
Sbjct: 4301 TL 4302



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 41/75 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +++ IV +  G++  +A++  GQV+ WG   + +LG G   + R P+L+  L  K 
Sbjct: 637 VEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKK 696

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+ G +H  A T
Sbjct: 697 VVDVAVGSTHCLALT 711



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A K + +VD++ G+     LAV+  GQV++WG+    +LG G     + P+LV  L +
Sbjct: 583 VTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 642

Query: 67  KNIRQVSAGRSHSAAWT 83
            +I +V  G   S A T
Sbjct: 643 LDIVKVCCGSQFSVALT 659



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 38/69 (55%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + + +VDI+ G  H   ++ +G++F WG     +LG G+  +  +P+LV AL  
Sbjct: 4071 RVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG 4130

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 4131 HRVIDVACG 4139



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G++++WG     +LG G+      P+L
Sbjct: 3071 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKL 3130

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3131 VKVLLGHRVIQVACG 3145



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G  ++ R
Sbjct: 3175 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 3232

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3233 KPQMVEGLRGKKIVHVAVGALHCLAVT 3259



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3248 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3307

Query: 474  V 474
            V
Sbjct: 3308 V 3308



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 3/68 (4%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +VD++VG+ H LA+++ G+V +WG+N   Q       N ++P+ +  L  K+I  +S G 
Sbjct: 697 VVDVAVGSTHCLALTDDGEVHSWGSNDKLQ-HFDTLSNKKQPKALPGL--KHIVGISCGP 753

Query: 77  SHSAAWTA 84
             S AW++
Sbjct: 754 GQSFAWSS 761



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 4/63 (6%)

Query: 25  EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL----SNKNIRQVSAGRSHSA 80
           +H LA+S+ G+VF+WG     +LG G+     EP ++ A     + K++  ++ G ++SA
Sbjct: 491 QHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSA 550

Query: 81  AWT 83
             T
Sbjct: 551 VIT 553


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 203/423 (47%), Gaps = 30/423 (7%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 2460 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 2519

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP  +P  Y HL   P+  +R R
Sbjct: 2520 KKINRVACGSAHTLAWSTSK--PANAGK---------LPTQVPMEYNHLPEIPIIALRNR 2568

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S++    + +  L G +D+     +    +   +LR +   +       + V 
Sbjct: 2569 LLLLHHISEVFCPCIPMFDLEGRLDETGQGPS----VGFDTLRGILISQGKEAAFRKVVQ 2624

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 2625 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 2684

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G  PLL+ TPNG  ++G NRD ++LNP   
Sbjct: 2685 WKVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTPNGRDESGANRDCFLLNPAAR 2744

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
             +L + M F+FLG+L GVAIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 2745 STLHTNM-FRFLGVLLGVAIRTGSPLSLSLAEPVWKQLAGLNLTIADLSEVDKDFIPGLM 2803

Query: 357  AIRDIHLSG--VTEANFPEIIPLECFEGASWTGRITPIV--TGGQSVPLTFANRLQYYEA 412
             IRD   +       + P  +P    +    + + T I   +  + V L    RL  ++ 
Sbjct: 2804 YIRDNEATAEEFEAMSLPFTVPSASGQDIQLSSKHTHITLESRAEYVRLAMNYRLHEFDE 2863

Query: 413  AIA 415
             +A
Sbjct: 2864 QVA 2866



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  VSCG    
Sbjct: 261 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 320

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 321 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 354



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 1294 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 1353

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 1354 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNVPQ 1387



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VPL    T  +
Sbjct: 1175 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPLPRQITALS 1233

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 1234 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 1293

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 1294 IACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNTTQLKP 1332



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T  G LY++G G YGRLGHG + +   P+ V AL    V  ++CG    
Sbjct: 2315 IAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDA 2374

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 2375 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 2401



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 2401 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 2460

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 2461 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 2512



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H +A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 1227 RQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 1286

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 1287 KTKRIRDIACGSSHSAAITS 1306



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  V +L  + V  ++ G 
Sbjct: 2260 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGG 2319

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G  +Y++G G YG+LG G++   LKP
Sbjct: 2320 AHSACITVAGD-LYSWGKGRYGRLGHGDSEDQLKP 2353



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPL--TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q++P+  T    L+  + +   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 286 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 345

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + +  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 346 GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 398



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 409  YYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y    IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V
Sbjct: 2362 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 2421

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             CG   +V +   G AVY +G G+Y +LG G+
Sbjct: 2422 ECGSQFSVALTKSG-AVYTWGKGDYHRLGHGS 2452



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G ++++G GD GRLGHG T+  + P+ + AL+      HV  ++CG  ++  
Sbjct: 211 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 270

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 271 ITAEGE-LYTWGRGNYGRLGHGSSEDQTIP 299



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 3/83 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    VP+ +  LN   V  + CG  
Sbjct: 1346 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQ 1405

Query: 472  HTVCIADKGKAVYAFGDGEYGKL 494
             ++ +   G  V+ +G G++G+L
Sbjct: 1406 FSLALTKSG-VVWTWGRGDFGEL 1427



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ IV +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 356 IEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 415

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 416 VVDVAAGSTHCLALT 430



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 2472 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 2531

Query: 473  TV 474
            T+
Sbjct: 2532 TL 2533



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 42/69 (60%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P++V +L    +  ++A
Sbjct: 2258 VKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAA 2317

Query: 75   GRSHSAAWT 83
            G +HSA  T
Sbjct: 2318 GGAHSACIT 2326



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  V       H LA++ TG+VF+WG     +LG G+ +   EP+++ ALS     
Sbjct: 196 ASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAG 255

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 256 KHVVHIACGSTYSAAITA 273



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 29/49 (59%)

Query: 35   QVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +V+AWG+N   Q G G     R+P LV  L  + I +V+ G SHS AWT
Sbjct: 1495 EVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 1543



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D+S G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 302 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 361

Query: 67  KNIRQVSAGRSHSAAWT 83
            +I +V  G   S A T
Sbjct: 362 LDIVKVRCGSQFSIALT 378



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 367 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHC 426

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 427 LALTEDSE-VHSWGSND 442



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++V  L  
Sbjct: 1281 RLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG 1340

Query: 67   KNIRQVSAG 75
              + QV+ G
Sbjct: 1341 HRVIQVACG 1349



 Score = 45.4 bits (106), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 37/69 (53%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + + + I +VDI+ G  H   ++  G +++WG     +LG G+  +  +P+LV AL  
Sbjct: 2302 RVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQG 2361

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 2362 YRVIDIACG 2370



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   +VD++ G+ H LA++   +V +WG+N   Q     +I   +P  +  L  K+
Sbjct: 408 LEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPQPSALPGLDTKH 467

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 468 IVGIACGPAQSFAWSS 483



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H+V I+ G+ +  A++  G+++ WG  +  +LG G+  +   P LV  L    +  VS G
Sbjct: 257 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 316


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 206/420 (49%), Gaps = 37/420 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4244 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4303

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4304 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 4352

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLV-HPSLRPLFAPRVYTLPLVRSV 184
            L LL+  S+L    + +  L G++D+     T +   V   +LR +   +       + V
Sbjct: 4353 LLLLHHISELFCPCIPMFDLEGSLDE-----TGHGPSVGFDTLRGILISQGKEAAFRKVV 4407

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSR 235
              TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R
Sbjct: 4408 QATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHR 4467

Query: 236  AWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDL 295
             WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ +P  
Sbjct: 4468 VWKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFSPAA 4527

Query: 296  SESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSL 355
               + + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L
Sbjct: 4528 RAPVHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGL 4586

Query: 356  RAIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
              IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4587 MYIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 4638



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL   HV  V+CG    
Sbjct: 4099 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDA 4158

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4159 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4185



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3165 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3198



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2986 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3044

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3105 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3143



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4245 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4296



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3312 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3358



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3270

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3271 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 3301



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4151 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4210

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4211 FSVALTKSG-AVYTWGKGDYHRLGHGS 4236



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3038 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3097

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3098 KTKRIRDIACGSSHSAALTS 3117



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4044 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4103

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4104 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4137



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3157 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3217 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3250



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4101

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4102 GGAHSACVTA 4111



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4256 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4315

Query: 473  TV 474
            T+
Sbjct: 4316 TL 4317



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3190 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVT 3274



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3146 VKVLLGHRVIQVACG 3160



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVVKVRCGSQFSIALT 674



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 474  V 474
            V
Sbjct: 3323 V 3323



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 36/69 (52%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4086 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4145

Query: 67   KNIRQVSAG 75
             ++  V+ G
Sbjct: 4146 HHVVDVACG 4154



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 206/420 (49%), Gaps = 37/420 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4251 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4310

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4311 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 4359

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLV-HPSLRPLFAPRVYTLPLVRSV 184
            L LL+  S+L    + +  L G++D+     T +   V   +LR +   +       + V
Sbjct: 4360 LLLLHHISELFCPCIPMFDLEGSLDE-----TGHGPSVGFDTLRGILISQGKEAAFRKVV 4414

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSR 235
              TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R
Sbjct: 4415 QATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHR 4474

Query: 236  AWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDL 295
             WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ +P  
Sbjct: 4475 VWKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFSPAA 4534

Query: 296  SESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSL 355
               + + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L
Sbjct: 4535 RAPVHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGL 4593

Query: 356  RAIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
              IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4594 MYIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 4645



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL   HV  V+CG    
Sbjct: 4106 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDA 4165

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4166 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4192



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3112 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3171

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3172 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3205



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2993 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3051

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3052 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3111

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3112 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3150



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4192 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4251

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4252 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4303



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3259 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3318

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3319 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3365



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3218 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3277

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3278 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 3308



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4158 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4217

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4218 FSVALTKSG-AVYTWGKGDYHRLGHGS 4243



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3045 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3104

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3105 KTKRIRDIACGSSHSAALTS 3124



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4051 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4110

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4111 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4144



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3164 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3223

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3224 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3257



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4049 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4108

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4109 GGAHSACVTA 4118



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4263 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4322

Query: 473  TV 474
            T+
Sbjct: 4323 TL 4324



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3197 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3254

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3255 KPQVVEGLRGKKIVHVAVGALHCLAVT 3281



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3093 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3152

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3153 VKVLLGHRVIQVACG 3167



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVVKVRCGSQFSIALT 674



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3270 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3329

Query: 474  V 474
            V
Sbjct: 3330 V 3330



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 36/69 (52%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4093 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4152

Query: 67   KNIRQVSAG 75
             ++  V+ G
Sbjct: 4153 HHVVDVACG 4161



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 206/419 (49%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4247 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPALQG 4306

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 4307 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PTQVPMEYNHLQEIPIIALRNR 4355

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4356 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4411

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4412 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4471

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ +P   
Sbjct: 4472 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFSPAAR 4531

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4532 APVHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGLM 4590

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4591 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRTEYVRLAI 4641



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  VP  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3108 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3168 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3201



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2989 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQVTALS 3047

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3048 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3108 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3146



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 4102 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDA 4161

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4162 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4188



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4188 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4247

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4248 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4299



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3314

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3315 ITRVACGSSHSVAWTTVDMATPSVHEPVLFQTARDPLGASYLGVPSD 3361



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3214 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3273

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3274 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 3304



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  ++VP+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4154 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4213

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4214 FSVALTKSG-AVYTWGKGDYHRLGHGS 4239



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R + A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3041 RQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3100

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3101 KTKRIRDIACGSSHSAALTS 3120



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + +  V+ G 
Sbjct: 4047 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGG 4106

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4107 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4140



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAVP 595



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3160 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3219

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3220 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3253



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4045 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAA 4104

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4105 GGAHSACVTA 4114



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4259 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAH 4318

Query: 473  TV 474
            T+
Sbjct: 4319 TL 4320



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3193 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3250

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3251 KPQVVEGLRGKKIVHVAVGALHCLAVT 3277



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3089 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3148

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3149 VKVLLGHRVIQVACG 3163



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVVKVRCGSQFSIALT 674



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3266 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325

Query: 474  V 474
            V
Sbjct: 3326 V 3326



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4089 RVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4148

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 4149 HRVVDVACG 4157


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4300

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4301 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4349

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4350 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4405

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4406 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4465

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4466 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4525

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL   L+  VWK +    +T  DL + D  +   L 
Sbjct: 4526 APVHSSM-FRFLGVLLGIAIRTGSPLSPNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4584

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4585 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4635



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3164 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3197



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2985 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3043

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3044 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3104 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3142



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4096 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4155

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4156 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4182



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4242 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4293



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3311 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3357



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3269

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3270 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3300



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4148 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4207

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4208 FSVALTKSG-AVYTWGKGDYHRLGHGS 4233



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3037 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3096

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3097 KTKRIRDIACGSSHSAALTS 3116



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4100

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4101 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4134



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3156 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3215

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3216 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3249



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4099 GGAHSACVTA 4108



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4253 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4312

Query: 473  TV 474
            T+
Sbjct: 4313 TL 4314



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3189 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3246

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3247 KPQVVEGLRGKKIVHVAVGALHCLAVT 3273



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3144

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3145 VKVLLGHRVIQVACG 3159



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 474  V 474
            V
Sbjct: 3322 V 3322



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4083 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4142

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4143 HRVVDIACG 4151


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4300

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4301 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4349

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4350 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4405

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4406 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4465

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4466 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4525

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT  PL   L+  VWK +    +T  DL + D  +   L 
Sbjct: 4526 APVHSSM-FRFLGVLLGIAIRTGSPLSPNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4584

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4585 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4635



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3164 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3197



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2985 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3043

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3044 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3104 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3142



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 4096 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4155

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4156 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4182



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4242 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4293



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3311 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3357



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3269

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3270 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3300



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4148 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4207

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4208 FSVALTKSG-AVYTWGKGDYHRLGHGS 4233



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3037 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3096

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3097 KTKRIRDIACGSSHSAALTS 3116



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4100

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 4101 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4134



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3156 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3215

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 3216 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3249



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4099 GGAHSACVTA 4108



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4253 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4312

Query: 473  TV 474
            T+
Sbjct: 4313 TL 4314



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 3189 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3246

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3247 KPQVVEGLRGKKIVHVAVGALHCLAVT 3273



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3144

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3145 VKVLLGHRVIQVACG 3159



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 474  V 474
            V
Sbjct: 3322 V 3322



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 4083 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4142

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4143 HRVVDIACG 4151


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 3993 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4052

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+     P + G          LP  +P  Y HLQ  P+  +R R
Sbjct: 4053 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4101

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 4102 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4157

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4158 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4217

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P   
Sbjct: 4218 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4277

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + S M F+FLG+L G+AIRT   L L L+  VWK +    +T  DL + D  +   L 
Sbjct: 4278 APVHSSM-FRFLGVLLGIAIRTGSHLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4336

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4337 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4387



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 533 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 592

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 593 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 626



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 2856 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2915

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 2916 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 2949



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2737 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 2795

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 2796 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 2855

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 2856 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 2894



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 3848 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 3907

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 3908 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 3934



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 3934 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3993

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 3994 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4045



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3003 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3062

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3063 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3109



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 2962 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3021

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3022 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3052



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 558 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 617

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 618 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 670



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 3900 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 3959

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 3960 FSVALTKSG-AVYTWGKGDYHRLGHGS 3985



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 2789 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 2848

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 2849 KTKRIRDIACGSSHSAALTS 2868



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 3793 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 3852

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 3853 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 3886



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 2908 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 2967

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 2968 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3001



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 628 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 687

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 688 VIDVAAGSTHCLALT 702



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD  RLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 483 HYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 542

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 543 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 571



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 3791 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 3850

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 3851 GGAHSACVTA 3860



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 4005 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4064

Query: 473  TV 474
            T+
Sbjct: 4065 TL 4066



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 2941 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2998

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 2999 KPQVVEGLRGKKIVHVAVGALHCLAVT 3025



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 639 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 698

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 699 LALTEDSE-VHSWGSND 714



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 2837 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 2896

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 2897 VKVLLGHRVIQVACG 2911



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 574 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 633

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 634 LDVVKVRCGSQFSIALT 650



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3014 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3073

Query: 474  V 474
            V
Sbjct: 3074 V 3074



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +N+  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 468 ASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAG 527

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 528 KHVVHIACGSTYSAAITA 545



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 3835 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 3894

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 3895 HRVVDIACG 3903



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/73 (24%), Positives = 38/73 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 680 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 739

Query: 69  IRQVSAGRSHSAA 81
           I  ++ G + S+A
Sbjct: 740 IVGIACGPAQSSA 752


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 199/419 (47%), Gaps = 35/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 3052 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 3111

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP  +P  Y HLQ   +  +R R
Sbjct: 3112 KKINRVACGSAHTLAWSTSK--PTNAGK---------LPAQVPMEYNHLQEIAIIGLRNR 3160

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+  S+L    +   P+ +++    +      +   +LR +   +       + V  
Sbjct: 3161 LLLLHHISELFCPCI---PMFDLEGRLGETGHGVSVGFDTLRGILISQGKEAAFRKVVQA 3217

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R W
Sbjct: 3218 TMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRVW 3277

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK +GE  DD GG + ++I EMC EL +G  PLL+ TPNG  ++G NRD ++LNP    
Sbjct: 3278 KVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTPNGRDESGANRDCFLLNPAAKS 3337

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
             L   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L  
Sbjct: 3338 PLHISM-FRFLGVLLGIAIRTGSPLSLYLAEPVWKQLAGMNLTIADLSEVDKDFIPGLMY 3396

Query: 358  IRDIHLSGVT-EAN-FPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD   S    EA   P  +P  C +    + + + I         +  NR +Y   AI
Sbjct: 3397 IRDNEASAEEFEAMPLPFTVPSACGQEVQLSSKHSHI---------SLENRSEYVRLAI 3446



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T++G LYT+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 2907 IAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDA 2966

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 2967 QTLCLTDD-DMVWSWGDGDYGKLGRGGS 2993



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LY++G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 1913 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDA 1972

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 1973 QTLALTDEG-MVFSWGDGDFGKLGRGGSEGCNIPQ 2006



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 88/159 (55%), Gaps = 7/159 (4%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRI-TPIVTGGQSVPLTFANRLQ 408
            ++++L A+  + ++G +++ F      + +  G +  GR+   + +G   +P   +    
Sbjct: 1794 FSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSN 1853

Query: 409  YY--EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y   + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  +
Sbjct: 1854 YVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 1913

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            +CG +H+  I   G+ +Y++G GEYG+LG G+  T L+P
Sbjct: 1914 ACGSSHSAAITSSGE-LYSWGLGEYGRLGHGDNTTQLRP 1951



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 2993 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3052

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 3053 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 3104



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 44/75 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+ TGQVFAWG+N   Q G G     R+P LV  L  + 
Sbjct: 2060 VEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 2119

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 2120 ITRVACGSSHSVAWT 2134



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT ++ + P+ V  L    +  V+ G  H 
Sbjct: 2019 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHC 2078

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + + G+ V+A+GD ++G+ G G T +   P
Sbjct: 2079 LAVTETGQ-VFAWGDNDHGQQGNGTTTVNRKP 2109



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G LY++G  + G+LGHG       P  + +L  V V  ++ G 
Sbjct: 2852 KVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGG 2911

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G+ +Y +G G YG+LG G++   LKP
Sbjct: 2912 AHSACITASGE-LYTWGKGRYGRLGHGDSEDQLKP 2945



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H +A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 1846 RQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 1905

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 1906 KTKRIRDIACGSSHSAAITS 1925



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 2959 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 3018

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 3019 FSVALTKSG-AVYTWGKGDYHRLGHGS 3044



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 1965 VACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 2024

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G  V+ +G G+Y +LG G 
Sbjct: 2025 FSLALTKSG-VVWTWGKGDYFRLGHGT 2050



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G++++WG   D +LG GN+     P+++ +L    +  ++A
Sbjct: 2850 IRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAA 2909

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 2910 GGAHSACITA 2919



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 3064 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 3123

Query: 473  TV 474
            T+
Sbjct: 3124 TL 3125



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G++++WG     +LG G+      P+L
Sbjct: 1894 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKL 1953

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 1954 VKVLLGHRVVQVACG 1968



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G  ++ R
Sbjct: 1998 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 2055

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 2056 KPQMVEGLRGKKIVHVAVGALHCLAVT 2082



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 38/69 (55%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + + +VDI+ G  H   ++ +G+++ WG     +LG G+  +  +P+LV AL  
Sbjct: 2894 RVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQG 2953

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 2954 HRVIDVACG 2962



 Score = 45.1 bits (105), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G ++ +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 2071 VAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 2130

Query: 474  V 474
            V
Sbjct: 2131 V 2131



 Score = 38.1 bits (87), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 17   IVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +V ++ G+     LA+++ G VF+WG+    +LG G       PQ +  L+ + + Q+  
Sbjct: 1962 VVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 2021

Query: 75   GRSHSAAWT 83
            G   S A T
Sbjct: 2022 GAQFSLALT 2030


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 199/418 (47%), Gaps = 33/418 (7%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4184 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4243

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          +P  +P  Y HLQ   +  +R R
Sbjct: 4244 KKINRVACGSAHTLAWSTSK--PTNAGK---------MPAQVPMEYNHLQEISVMALRNR 4292

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ FS+L    +   P+ +++    Q      +   +LR +   +       + V  
Sbjct: 4293 LLLLHHFSELFCPCI---PMFDLEGRLGQTGHGPSVGFDTLRGILISQGKEAAFRKVVQA 4349

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRAW 237
            TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R W
Sbjct: 4350 TMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRVW 4409

Query: 238  KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
            KVK +GE  DD GG + ++I EMC EL +   PLL+ TPNG  ++G NRD ++LNP    
Sbjct: 4410 KVKFVGESVDDCGGGYSESIAEMCEELQNSLTPLLIVTPNGRDESGANRDCFLLNPAAKS 4469

Query: 298  SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
             L   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L  
Sbjct: 4470 PLHMGM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMY 4528

Query: 358  IRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            IRD       EA   E   +   F   + +G+   I    +   +T  NR +Y   AI
Sbjct: 4529 IRD------NEATSEEFEAMTLPFTVPNASGQ--DIQLSSKYSHITLENRAEYVRLAI 4578



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA VT++G LYT+G G+YGRLGHG++ +   P  V AL    V  V+CG    
Sbjct: 507 IACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDA 566

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 567 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 600



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T++G L+T+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 4039 IAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDA 4098

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4099 QTLCLTDD-DMVWSWGDGDYGKLGRGGS 4125



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LY++G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3066 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDA 3125

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3126 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3159



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 89/159 (55%), Gaps = 7/159 (4%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRI-TPIVTGGQSVPLTFANRLQ 408
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   + +G   +P   +    
Sbjct: 2947 FSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSN 3006

Query: 409  YY--EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y   + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  +
Sbjct: 3007 YVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 3066

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            +CG +H+  I   G+ +Y++G GEYG+LG G+  T L+P
Sbjct: 3067 ACGSSHSAAITSSGE-LYSWGLGEYGRLGHGDNTTQLRP 3104



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4125 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4184

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4185 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4236



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT ++ + P+ V  L    +  V+ G  H 
Sbjct: 3172 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHC 3231

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3232 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3262



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3213 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3272

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3273 ITRVACGSSHSVAWT 3287



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H +A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 2999 RQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3058

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3059 KTKRIRDIACGSSHSAAITS 3078



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  V V  ++ G 
Sbjct: 3984 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGG 4043

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G+ ++ +G G YG+LG G++   LKP
Sbjct: 4044 AHSACITASGE-LFTWGKGRYGRLGHGDSEDQLKP 4077



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 4091 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4150

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4151 FSVALTKSG-AVYTWGKGDYHRLGHGS 4176



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 3/86 (3%)

Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG     +  VT NG ++++G+GDYG+LG G +   K P+ V  L  + +  V CG  
Sbjct: 559 VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQ 618

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
            +V +   G+ VY +G G+  +LG G
Sbjct: 619 FSVALTKDGQ-VYTWGKGDNQRLGHG 643



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3118 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3177

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G       PQ
Sbjct: 3178 FSLALTKSG-VVWTWGKGDYFRLGHGTDVHVRKPQ 3211



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +YT+G GD  RLGHGT  + + P+ + +L    V  ++ G  H 
Sbjct: 613 VCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHC 672

Query: 474 VCIADKGKAVYAFGDGE 490
           + + D+G+ V+++G  +
Sbjct: 673 LALTDEGE-VHSWGSND 688



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  ++A
Sbjct: 3982 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAA 4041

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4042 GGAHSACITA 4051



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4196 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4255

Query: 473  TV 474
            T+
Sbjct: 4256 TL 4257



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 5/91 (5%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTV 474
           +H   ++++G +Y++G GD GRLGHG     + P  +   +       V  ++CG  ++ 
Sbjct: 456 QHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSA 515

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +   G+ +Y +G G YG+LG G++    TP
Sbjct: 516 AVTADGE-LYTWGRGNYGRLGHGSSEDVTTP 545



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 42/75 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +++ IV +  G++  +A++  GQV+ WG   + +LG G   + R P+L+ +L  K 
Sbjct: 602 VEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKK 661

Query: 69  IRQVSAGRSHSAAWT 83
           +  ++ G +H  A T
Sbjct: 662 VVDIAVGSTHCLALT 676



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 46/76 (60%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + +   +VDI+VG+ H LA+++ G+V +WG+N   Q       N ++P+ +  L++K+
Sbjct: 654 LDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDTLFPNKKQPKALPGLNSKH 713

Query: 69  IRQVSAGRSHSAAWTA 84
           I  +S G   S AW++
Sbjct: 714 IVGISCGPGQSFAWSS 729



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A K   +VD++ G+     LAV+  GQV++WG+    +LG G     + P+LV  L +
Sbjct: 548 VTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 607

Query: 67  KNIRQVSAGRSHSAAWT 83
            +I +V  G   S A T
Sbjct: 608 LDIVKVCCGSQFSVALT 624



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 38/69 (55%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + + +VDI+ G  H   ++ +G++F WG     +LG G+  +  +P+LV AL  
Sbjct: 4026 RVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG 4085

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 4086 HRVIDVACG 4094



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G++++WG     +LG G+      P+L
Sbjct: 3047 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKL 3106

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3107 VKVLLGHRVIQVACG 3121



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G  ++ R
Sbjct: 3151 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 3208

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3209 KPQIVEGLRGKKIVHVAVGALHCLAVT 3235



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)

Query: 25  EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----NKNIRQVSAGRSHSA 80
           +H LA+S +G+V++WG     +LG G+     EP L+   S     K + Q++ G ++SA
Sbjct: 456 QHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSA 515

Query: 81  AWTA 84
           A TA
Sbjct: 516 AVTA 519



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3224 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3283

Query: 474  V 474
            V
Sbjct: 3284 V 3284



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 33/60 (55%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
            +V I+ G+ +  AV+  G+++ WG  +  +LG G+  +   P LV AL  + +  V+ G
Sbjct: 503 QVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACG 562


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 209/424 (49%), Gaps = 40/424 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 3077 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 3136

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ+ P+  +R R
Sbjct: 3137 KKVNRVACGSAHTLAWST---------SKPASAGKL--PAQVPMEYSHLQDLPVVALRNR 3185

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G +D+  +  +    +   +LR +   +   +   + V 
Sbjct: 3186 LLLLHHVSELFCPCIPMFDLEGALDEAGLGPS----VGFDTLRGILISQGKEVAFRKVVQ 3241

Query: 186  KTMLVGKNFGP--------SVTVRRLTTKSK------QTVKPIFAQISRQVVKMKGSDLR 231
             TM+  +  GP        SV ++   ++SK         K +F Q+  ++       L 
Sbjct: 3242 ATMVRDRQHGPVVELXVLFSVCLQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLL 3301

Query: 232  LPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYIL 291
            LP R WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ 
Sbjct: 3302 LPHRVWKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLF 3361

Query: 292  NPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLY 351
            +P     + + M F+FLG+L GVAIRT  PL L L+  VWK +    +T  DL + D  +
Sbjct: 3362 SPAARAPVHTNM-FRFLGVLLGVAIRTGSPLSLSLAEPVWKQLAGMSLTIADLSEVDKDF 3420

Query: 352  AQSLRAIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYY 410
               L  IRD       EA   E   +   F   S +G+   + T  +   ++  NR +Y 
Sbjct: 3421 IPGLMYIRD------NEATSEEFEAMSLPFTVPSASGQDIQLST--KYTHISLDNRAEYV 3472

Query: 411  EAAI 414
              AI
Sbjct: 3473 RLAI 3476



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 1939 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDA 1998

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 1999 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNVPQ 2032



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   V+ G +VP+    T  +
Sbjct: 1820 FSETLSALNAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSG-TVPVPRQVTALS 1878

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T++G ++++G GD G+LGH +  N   P  + AL    +  
Sbjct: 1879 SYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRD 1938

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 1939 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 1977



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 2932 VAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDA 2991

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ +    V+++GDG+YGKLG G +
Sbjct: 2992 QTLCLTED-DTVWSWGDGDYGKLGRGGS 3018



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+            + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 3018 SDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3077

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 3078 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 3129



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 2086 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 2145

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 2146 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 2192



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 2045 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 2104

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 2105 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 2135



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP +V AL  +    V CG  
Sbjct: 2984 VACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQ 3043

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 3044 FSVALTKSG-AVYTWGKGDYHRLGHGS 3069



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 2877 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 2936

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 2937 AHSACVTAAG-GLYTWGKGRYGRLGHSDSEDQLKP 2970



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R + A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  ++ N  +P+L+ AL
Sbjct: 1872 RQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEAL 1931

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
             ++ IR ++ G SHSAA T+
Sbjct: 1932 KSRRIRDIACGSSHSAALTS 1951



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    VP+ +  LN   V  + CG  
Sbjct: 1991 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQ 2050

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G  V+ +G G+Y +LG G+
Sbjct: 2051 FSLALTKSG-VVWTWGKGDYFRLGHGS 2076



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 2875 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 2934

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 2935 GGAHSACVTA 2944



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 3089 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 3148

Query: 473  TV 474
            T+
Sbjct: 3149 TL 3150



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A K+  I DI+ G+ H  A++++G+++ WG     +LG G+     +P++V  L  
Sbjct: 1926 RLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVG 1985

Query: 67   KNIRQVSAG 75
              + QV+ G
Sbjct: 1986 HRVVQVACG 1994



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G ++P  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 2024 GSEGCNVP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2081

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 2082 KPQVVEGLRGKKIVHVAVGALHCLAVT 2108



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 2097 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 2156

Query: 474  V 474
            V
Sbjct: 2157 V 2157



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 2919 RVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 2978

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 2979 HRVVDVACG 2987


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 204/419 (48%), Gaps = 36/419 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G  + WG+N + QLG G     + P+LV AL  
Sbjct: 3468 RQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDNDEGQLGDGTTNAIQRPRLVAALQG 3526

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 3527 KKVNRVACGSAHTLAWSTS---------KPASAGKL--PAQVPMEYNHLQEIPIIALRNR 3575

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 3576 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 3631

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 3632 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 3691

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+ +P   
Sbjct: 3692 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLFSPAAR 3751

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              + + M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L 
Sbjct: 3752 APVHTNM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 3810

Query: 357  AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD       EA   E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 3811 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKYTHITLDNRAEYVRLAI 3861



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 2329 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2388

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 2389 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 2422



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2210 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 2268

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 2269 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 2328

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 2329 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 2367



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 3323 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDA 3382

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 3383 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 3409



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 2476 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 2535

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 2536 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 2582



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 2/113 (1%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 3409 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3468

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G   Y +GD + G+LG G T     P+
Sbjct: 3469 QVQGLQGKKVIAIATGSLHCVCCTEDGS--YTWGDNDEGQLGDGTTNAIQRPR 3519



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 2435 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 2494

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 2495 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 2525



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 3375 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 3434

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 3435 FSVALTKSG-AVYTWGKGDYHRLGHGS 3460



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 2262 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 2321

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 2322 KTKRIRDIACGSSHSAALTS 2341



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 3268 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 3327

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 3328 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 3361



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 2381 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 2440

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 2441 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 2474



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 3266 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 3325

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 3326 GGAHSACVTA 3335



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G  YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 3480 AIATGSLHCVCCTEDGS-YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 3538

Query: 473  TV 474
            T+
Sbjct: 3539 TL 3540



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 2414 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2471

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 2472 KPQVVEGLRGKKIVHVAVGALHCLAVT 2498



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 2310 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 2369

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 2370 VKVLLGHRVIQVACG 2384



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 2487 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 2546

Query: 474  V 474
            V
Sbjct: 2547 V 2547



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 3310 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQG 3369

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 3370 HRVVDVACG 3378


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 88/152 (57%), Positives = 110/152 (72%), Gaps = 1/152 (0%)

Query: 263  ELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPL 322
            EL +G + LL+ TPN  A+ G NRDR++LNP  + S + L  FKFLGILFGVAIRTKKPL
Sbjct: 3811 ELETGVIDLLLPTPNSSAEVGCNRDRFVLNPSAT-SQEHLHQFKFLGILFGVAIRTKKPL 3869

Query: 323  PLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEG 382
             L L+P+VWK +   P+T  D+ED D L+ QSLR+IRDI  SGVT   F E+IPL+CFEG
Sbjct: 3870 DLHLAPMVWKQLAGMPLTIDDVEDVDALFVQSLRSIRDIDKSGVTSETFHEVIPLDCFEG 3929

Query: 383  ASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             S  GR  PI+ GG+S+PLTF NR +Y E A+
Sbjct: 3930 QSVDGRFVPIIPGGRSIPLTFHNRKEYVERAL 3961



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 72/93 (77%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACGFKHSAVV+++G L+TFGNGDYGRLG G T N K+PERV AL    V  V CGLNHT
Sbjct: 3325 MACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHT 3384

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + ++  G  V++FGDG+YGKLGLGN+  K TPQ
Sbjct: 3385 LAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQ 3417



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 63/129 (48%), Gaps = 34/129 (26%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + +PA +   + D+ VG EH LA+++TG+V+AWG+N D QLG+G+    REP LV AL  
Sbjct: 3469 QQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARREPCLVTALQG 3528

Query: 67   KNIRQV----------------------------------SAGRSHSAAWTAPPLPPHTP 92
            KN+RQV                                  SAGR+HS  WTAPP P   P
Sbjct: 3529 KNVRQVWGSNGDGQLGIGDTNARREPCLVTDLQGKNVRQISAGRNHSGGWTAPPPPKRAP 3588

Query: 93   GHTPSSSLR 101
                  S R
Sbjct: 3589 DFCRQESQR 3597



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 17/126 (13%)

Query: 386  TGR--ITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH 443
            TGR  +TP VT       +F+   Q     I CG   + V+ +NG +   G G YGRLG 
Sbjct: 3199 TGRSLLTPTVTP------SFSQAQQ-----IICGQNCTFVIQANGTVQACGEGSYGRLGQ 3247

Query: 444  GTTMNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
            G + +      + AL    V  +  SCG + H++ + + G+ V+++GDG+YGKLG GN+ 
Sbjct: 3248 GNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSD 3306

Query: 501  LKPTPQ 506
             +  P+
Sbjct: 3307 RQRRPR 3312



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 414  IACGFKHSAVVTSNG-YLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            + CG  H+  V+++G  +++FG+GDYG+LG G +     P+RV  L  + V+ V CG   
Sbjct: 3377 VGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQF 3436

Query: 473  TVCIADKGKAVYAFG 487
            +V +   G+ V+ FG
Sbjct: 3437 SVALTKDGR-VFTFG 3450



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   I+ ++ G +H   VS  G++F +GN    +LGLGN  N + P+ V AL  
Sbjct: 3312 RQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEG 3371

Query: 67   KNIRQVSAGRSHSAAWTA 84
            + + QV  G +H+ A +A
Sbjct: 3372 QMVGQVGCGLNHTLAVSA 3389



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G ++TFG           + N   P++V AL    VE V  G  H+
Sbjct: 3430 VCCGTQFSVALTKDGRVFTFGQERLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHS 3489

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + +   G+ V+A+G    G+LG+G+T  +  P
Sbjct: 3490 LALTSTGE-VWAWGSNGDGQLGIGDTNARREP 3520



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            S G++ H +A++ +G+VF+WG+    +LG GN    R P+ + AL  + I Q++ G  HS
Sbjct: 3273 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHS 3332

Query: 80   AAWTA 84
            A  +A
Sbjct: 3333 AVVSA 3337



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 1    MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
            +  TS + IP    A +   +  +  G  H LAVS  G  V+++G+    +LGLGN    
Sbjct: 3354 LGNTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAK 3413

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAAWT 83
              PQ V  L    +++V  G   S A T
Sbjct: 3414 STPQRVDPLCGIGVKKVCCGTQFSVALT 3441


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 205/423 (48%), Gaps = 56/423 (13%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S+ G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4435 KKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQG 4494

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K+I +V+ G +H+ A +   L           S RL    + P  Y  +++     + AR
Sbjct: 4495 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDLAPEALHAR 4543

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+ FS+L+   + +LP+               L   +L+ +    +      + +  
Sbjct: 4544 LILLHHFSELLCPCLAMLPISGD------------LSLGALKDVLVYNIKEAAFRKVIQT 4591

Query: 187  TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  K  GP + + R+  K  ++          +K +F Q+ +++  +    L LP R 
Sbjct: 4592 TMVRDKQHGPVIELNRIQVKRSRSRCNGLAGVDGMKSVFGQMVQKLPLLTQEALALPHRV 4651

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G+VPLL+ TPNG  + G NRD ++L+P L 
Sbjct: 4652 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLG 4711

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
              LQ  M F+FLG+L G+A              VW+ +  E +  TDL + D  Y   L 
Sbjct: 4712 SVLQMNM-FRFLGVLMGIAP-------------VWRQLTGETLRPTDLTEVDRDYVAGLL 4757

Query: 357  AIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIAC 416
             IR+++     +      + L  F  +S  G   P+ T  +   ++  NR +Y   A+  
Sbjct: 4758 CIRNMY----DDTKLFNTLELP-FSTSSARGHEVPLST--RYTHISARNRAEYVRLAL-- 4808

Query: 417  GFK 419
            GF+
Sbjct: 4809 GFR 4811



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 6/126 (4%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           GA    R+    T  ++VP T  + L     A+ CG  +SA +T +G LYT+G G YGRL
Sbjct: 640 GAGEDHRLGHGDTHARAVP-TKISALDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRL 698

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLG-- 497
           GHG + +  VP  V+AL +  +  V+ G    H++C+  +G  VYA+GDG+YGKLG G  
Sbjct: 699 GHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEG-LVYAWGDGDYGKLGNGNC 757

Query: 498 NTGLKP 503
           N+ L+P
Sbjct: 758 NSSLQP 763



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +ACG  HSA ++S G LYT+G G+YGRLGHG       P++V AL    V  V+CG    
Sbjct: 3171 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDA 3230

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + + G AV+++GDG++GKLG G +    TP 
Sbjct: 3231 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSATPH 3264



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 11/188 (5%)

Query: 324  LPLSPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANF---PEIIPLEC 379
            LP + +VW L  +E +      +     ++Q++  +R IH+SG +++ F    +     C
Sbjct: 3025 LPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFAC 3084

Query: 380  FEGASWTGRITPIVTGGQSVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGNGD 437
             EG +  GR+   VT    +P       QY   + A+  G KH+  +T +G ++++G G+
Sbjct: 3085 GEGTN--GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGE 3142

Query: 438  YGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
             G+LGHG       P  V AL    +  V+CG +H+  I+ +G+ +Y +G GEYG+LG G
Sbjct: 3143 DGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGE-LYTWGLGEYGRLGHG 3201

Query: 498  N--TGLKP 503
            +  T LKP
Sbjct: 3202 DNATQLKP 3209



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            A IACG  HSA +TS+G++ T+G G YGRLGHG + +   P+ V AL       ++CG  
Sbjct: 4288 ADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSG 4347

Query: 472  --HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
               T+CI D    V+++GDG+YGKLG G +
Sbjct: 4348 DAQTLCITDDDN-VWSWGDGDYGKLGRGGS 4376



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   +T+ G +Y +G G+ G+LGHG  M++  P+ V  LN + V  ++CG 
Sbjct: 4235 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGS 4294

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             H+  I   G  V  +G G YG+LG G++
Sbjct: 4295 AHSAAITSSGH-VLTWGKGRYGRLGHGDS 4322



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GD+ RLGHG+  + + P++V AL    + S++ G  H 
Sbjct: 4396 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4455

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
            V  +D G+ VY +GD + G+LG G 
Sbjct: 4456 VACSDAGE-VYTWGDNDEGQLGDGT 4479



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P+ +  L    V  V+ G  H 
Sbjct: 3277 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHC 3336

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 3337 LAVTDAGQ-VYAWGDNDHGQQGSGNTFVNKKP 3367



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV++ GQV+AWG+N   Q G GN    ++P LV+ L    
Sbjct: 3318 IGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF 3377

Query: 69   IRQVSAGRSHSAAWTAP 85
            + +V+ G SHS AW  P
Sbjct: 3378 VNRVACGSSHSIAWGLP 3394



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 2/90 (2%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVC 475
           C  +H   + SN   Y++G G+  RLGHG T    VP ++ AL++  V++V CG +++  
Sbjct: 622 CEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALDRC-VKAVFCGCSYSAA 680

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I   G  +Y +G G YG+LG GN+  +  P
Sbjct: 681 ITWSGN-LYTWGRGTYGRLGHGNSDDQCVP 709



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 42/67 (62%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +  V +  G +H LA++  G+VF+WG   D +LG GN+    +P+LV AL  K IR V+ 
Sbjct: 3114 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVAC 3173

Query: 75   GRSHSAA 81
            G SHSAA
Sbjct: 3174 GSSHSAA 3180



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 46/70 (65%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +  V ++ G +H LA++  G+V+AWG   D +LG GN+++Y  P+LV  L+  ++  ++ 
Sbjct: 4233 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIAC 4292

Query: 75   GRSHSAAWTA 84
            G +HSAA T+
Sbjct: 4293 GSAHSAAITS 4302



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 407  LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            L Y    IACG     +  +T +  ++++G+GDYG+LG G +   K+P ++ +L  + V 
Sbjct: 4335 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVI 4394

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             V CG   +V +   G AVY +G G++ +LG G+
Sbjct: 4395 KVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGS 4427



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G ++++G+GD+G+LG G +     P  +  L+ + V  + CG  
Sbjct: 3223 VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQ 3282

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 3283 FSLALTRAGE-VWTWGKGDYYRLGHGGDQHVRKPQ 3316



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G +YT+G+ D G+LG GT    + P  V AL   H+  V+CG  H
Sbjct: 4447 SIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 4506

Query: 473  TVCIA 477
            T+ ++
Sbjct: 4507 TLALS 4511



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G G T   K P  V+ L+ V V  V+CG +H+
Sbjct: 3329 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 3388

Query: 474  V 474
            +
Sbjct: 3389 I 3389



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 39/69 (56%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I D++ G+ H  A+S+ G+++ WG     +LG G+     +P+ V AL+ 
Sbjct: 3158 RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAG 3217

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 3218 RRVIQVACG 3226



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 5/103 (4%)

Query: 387 GRITPIVTGGQSVPLTFANRLQY--YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q VP       +Y   + A+  G  HS  +TS G +Y +G+GDYG+LG+G
Sbjct: 696 GRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNG 755

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
              +   P  V  L +  V+ +  G   ++ +  +G  +Y++G
Sbjct: 756 NCNSSLQPILVETLPR--VQRIFAGAQSSMALTTEGH-LYSWG 795



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 36/76 (47%)

Query: 8    HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
             I     I ++ I  G +  LA++  G+V+ WG     +LG G   + R+PQ +  L  +
Sbjct: 3265 EIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR 3324

Query: 68   NIRQVSAGRSHSAAWT 83
             +  V+ G  H  A T
Sbjct: 3325 RVIHVAVGALHCLAVT 3340



 Score = 42.4 bits (98), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 27/41 (65%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
           R + + ++  +VD++VG  H LA+++ G+VF WG N   Q+
Sbjct: 816 RLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWGRNDSQQI 856



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 36/75 (48%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            MS    + +     + + DI+ G+ H  A++++G V  WG     +LG G+  +   P+L
Sbjct: 4271 MSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKL 4330

Query: 61   VLALSNKNIRQVSAG 75
            V AL       ++ G
Sbjct: 4331 VEALLGYRAIDIACG 4345



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A     I+D+++G+   H L +++ G V+AWG+    +LG GN  +  +P LV  L  
Sbjct: 712 VMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETL-- 769

Query: 67  KNIRQVSAGRSHSAAWT 83
             ++++ AG   S A T
Sbjct: 770 PRVQRIFAGAQSSMALT 786


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 172/356 (48%), Gaps = 53/356 (14%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 3912 RQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 3971

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            + + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 3972 RKVNRVACGSAHTLAWST---------SKPASAGKL--PAQVPMEYNHLQELPVVALRNR 4020

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
            L LL+  S+L                                  F P +    L  ++G+
Sbjct: 4021 LLLLHHLSEL----------------------------------FCPCIPMFDLEGALGE 4046

Query: 187  TMLVGKNFGPSVTVRRLT--TKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
            T L     GP+V   R           K +F Q+  ++       L LP R WKVK +GE
Sbjct: 4047 TGL-----GPAVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRVWKVKFVGE 4101

Query: 245  GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
              DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P     + + M 
Sbjct: 4102 SVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAARAPVHTNM- 4160

Query: 305  FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRD 360
            F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L  IRD
Sbjct: 4161 FRFLGVLLGIAIRTGSPLSLSLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRD 4216



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 474 --VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + + D G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QPLAVTDNGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 2808 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2867

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 2868 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNVPQ 2901



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA VTS G LYT+G G YGRLGH  + +   P+ V AL    V  V+CG    
Sbjct: 3775 IAAGGAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDA 3834

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 3835 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 3861



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2689 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSG-TVPIPRQVTALS 2747

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 2748 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 2807

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 2808 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 2846



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 2955 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3014

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 3015 ITRVACGSSHSVAWTTVDMATPSVHEPVLFQTARDPLGASYLGVPSD 3061



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 2914 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 2973

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 2974 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 3004



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G      VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   +V +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R + A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 2741 RQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 2800

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 2801 KTKRIRDIACGSSHSAALTS 2820



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  V +L    V  ++ G 
Sbjct: 3720 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGG 3779

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 3780 AHSACVTSAGD-LYTWGKGRYGRLGHSDSEDQLKP 3813



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    VP+ +  LN   V  + CG  
Sbjct: 2860 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQ 2919

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G  V+ +G G+Y +LG G+
Sbjct: 2920 FSLALTKSG-VVWTWGKGDYFRLGHGS 2945



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 45/75 (60%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+ AL  K 
Sbjct: 652 IEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P++V +L    +  ++A
Sbjct: 3718 IRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAA 3777

Query: 75   GRSHSAAWTA 84
            G +HSA  T+
Sbjct: 3778 GGAHSACVTS 3787



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 434  GNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGK 493
            G GDY RLGHG+  + + P +V  L    V +++ G  H VC  ++G+ VY +GD + G+
Sbjct: 3893 GKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGE-VYTWGDNDEGQ 3951

Query: 494  LGLGNTGLKPTPQ 506
            LG G T     P+
Sbjct: 3952 LGDGTTNAIQRPR 3964



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 34/62 (54%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T  G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 3924 AIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGSAH 3983

Query: 473  TV 474
            T+
Sbjct: 3984 TL 3985



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ + AL    V  V+ G  H 
Sbjct: 663 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G+ +
Sbjct: 723 LALTEDSE-VHSWGNND 738



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A +   ++D++ G+ H LA++   +V +WGNN   Q          EP L+  L  K+
Sbjct: 704 LEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQHFDTLHQTKPEPSLLPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G ++P  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 2893 GSEGCNVP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2950

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 2951 KPQVVEGLRGKKIVHVAVGALHCLAVT 2977



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGTEHV--LAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV++ GQV++WG+    +LG G     + P+L+  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVVKVRCGSQFSVALT 674



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++V  L  
Sbjct: 2795 RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG 2854

Query: 67   KNIRQVSAG 75
              + QV+ G
Sbjct: 2855 HRVIQVACG 2863



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 2966 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3025

Query: 474  V 474
            V
Sbjct: 3026 V 3026



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + + +   +VDI+ G  H   V++ G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 3762 RVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 3821

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 3822 HRVVDVACG 3830


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 129/416 (31%), Positives = 197/416 (47%), Gaps = 57/416 (13%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +    + I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 2549 RQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 2608

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 2609 KKVNRVACGSAHTLAWST---------SKPASAGKL--PAQVPMEYNHLQELPVIALRNR 2657

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +    +    + RS  
Sbjct: 2658 LLLLHHVSELFCPCIPMFDLEGSLDETGLGPS----VGFDALRGIL---ISQGKVKRSRS 2710

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEG 245
            K  L G +                  K +F Q+  ++       L LP R WKVK +GE 
Sbjct: 2711 KGGLAGPD----------------GTKSVFGQLCARMSAFSPDSLLLPHRVWKVKFVGES 2754

Query: 246  ADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHF 305
             DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD ++L+P     +   M F
Sbjct: 2755 VDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCFLLSPAARAPVHCSM-F 2813

Query: 306  KFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSG 365
            +FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D  +   L  IRD     
Sbjct: 2814 RFLGVLLGIAIRTGSPLSLSLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRD----- 2868

Query: 366  VTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPL-------TFANRLQYYEAAI 414
              EA   E      FE  S    +     GGQ V L       T  +R +Y   AI
Sbjct: 2869 -NEATSEE------FEAMSLPFAVPS--AGGQDVQLSSKYTHITLDSRAEYVRLAI 2915



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG T     P+ V  L    V  V+CG    
Sbjct: 1409 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDA 1468

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 1469 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 1502



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 90/161 (55%), Gaps = 7/161 (4%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VPL    T  +
Sbjct: 1290 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSG-TVPLPRQVTALS 1348

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 1349 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 1408

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            ++CG +H+  +   G+ +Y +G GEYG+LG G+T  +  P+
Sbjct: 1409 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDTTTQLKPK 1448



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 2404 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDA 2463

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 2464 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 2490



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 1556 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 1615

Query: 69   IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
            I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 1616 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 1662



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T  G +YT+G GDY RLGHG+  + + P 
Sbjct: 2490 SDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPR 2549

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L      +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 2550 QVQGLQGKKAIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 2601



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 1515 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 1574

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 1575 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 1605



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 2456 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQ 2515

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 2516 FSVALTKAG-AVYTWGKGDYHRLGHGS 2541



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG+      P  + +L  + V  V+ G 
Sbjct: 2349 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGG 2408

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 2409 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 2442



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R + A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 1342 RQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 1401

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 1402 KTKRIRDIACGSSHSAALTS 1421



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 1461 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 1520

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G  V+ +G G+Y +LG G+
Sbjct: 1521 FSLALTKSG-VVWTWGKGDYFRLGHGS 1546



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 2561 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 2620

Query: 473  TV 474
            T+
Sbjct: 2621 TL 2622



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG G++     P+++ +L    +  V+A
Sbjct: 2347 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAA 2406

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 2407 GGAHSACVTA 2416



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 1494 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 1551

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 1552 KPQVVEGLRGKKIVHVAVGALHCLAVT 1578



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 1390 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKM 1449

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 1450 VKVLLGHRVVQVACG 1464



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 1567 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 1626

Query: 474  V 474
            V
Sbjct: 1627 V 1627



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 2391 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 2450

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 2451 HRVVGIACG 2459


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 194/418 (46%), Gaps = 35/418 (8%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 4254 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4313

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K I +V+ G +H+ AW+     P   G          LP  +P  Y HLQ   +  +R R
Sbjct: 4314 KKINRVACGSAHTLAWSTSK--PANAGK---------LPSQVPMEYNHLQEIMIIALRNR 4362

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G +D+     +    +   +LR +   +       + V 
Sbjct: 4363 LLLLHHISELFCPCIPMFDLEGRLDESGQGPS----IGFDTLRGILISQGKEAAFRKVVQ 4418

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
             TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 4419 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMASFSPDSLLLPHRV 4478

Query: 237  WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
            WKVK +GE  DD GG + ++I EMC EL +G  PLL+ TPNG  ++G NRD ++LNP   
Sbjct: 4479 WKVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTPNGRDESGANRDCFLLNPAAK 4538

Query: 297  ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
             +L   M F+FLG   G+   T   L    +  VWK +    +T  DL + D  +   L 
Sbjct: 4539 TTLHMNM-FRFLGX--GIPQNTGSLLXXXXAEPVWKQLAGMNLTIADLSEVDKDFIPGLM 4595

Query: 357  AIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             IRD      +E     I+P   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 4596 YIRDNE--ATSEEFEAMILP---FTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4646



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T++G LYT+G G+YGRLGHG++ +  VP  V  L  + V  VSCG    
Sbjct: 556 IACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLSVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 3168 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3201



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T+ G LYT+G G YGRLGHG + +   P+ V AL    V  ++CG    
Sbjct: 4109 IAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDA 4168

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ D    V+++GDG+YGKLG G +
Sbjct: 4169 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4195



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 89/160 (55%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F      + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 2989 FSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3047

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 3048 NYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3108 IACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3146



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 4195 SDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4254

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 4255 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4306



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 409  YYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
            Y    IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  V V  V
Sbjct: 4156 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKV 4215

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             CG   +V +   G AVY +G G+Y +LG G+
Sbjct: 4216 ECGSQFSVALTKSG-AVYTWGKGDYHRLGHGS 4246



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPL--TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q+VP+  T    L+  + +   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ +  L  + +  V CG   ++ I   G+ VY++G G+  +LG G
Sbjct: 641 GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQ-VYSWGKGDNQRLGHG 692



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 3041 RQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3100

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3101 KTKRIRDIACGSSHSAAITS 3120



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L    V  ++ G 
Sbjct: 4054 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGG 4113

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G+ +Y +G G YG+LG G++   LKP
Sbjct: 4114 AHSACITAAGE-LYTWGKGRYGRLGHGDSEDQLKP 4147



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 5/91 (5%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTV 474
           +H   +++   L+++G GD GRLGHG T++ + P+ V AL+       V  ++CG  ++ 
Sbjct: 505 QHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSA 564

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            I   G+ +Y +G G YG+LG G++  +  P
Sbjct: 565 AITADGE-LYTWGRGNYGRLGHGSSEDQTVP 594



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  ++A
Sbjct: 4052 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAA 4111

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 4112 GGAHSACITA 4121



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  H
Sbjct: 4266 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4325

Query: 473  TV 474
            T+
Sbjct: 4326 TL 4327



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 43/75 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ IV +  G++  +A++  GQV++WG   + +LG G + + R P+++  L  K 
Sbjct: 651 IEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+ G +H  A T
Sbjct: 711 VVDVAVGSTHCLALT 725



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + + G+ VY++G  +
Sbjct: 722 LALTESGE-VYSWGSND 737



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 43/68 (63%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +VD++VG+ H LA++ +G+V++WG+N   Q     +I    P ++  L +K+I  +S G 
Sbjct: 711 VVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCGP 770

Query: 77  SHSAAWTA 84
           + S AW++
Sbjct: 771 AQSFAWSS 778



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +      +H LA+S T ++F+WG     +LG G+ ++  EP+LV ALS     
Sbjct: 491 ASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K +  ++ G ++SAA TA
Sbjct: 551 KQVIHIACGSTYSAAITA 568



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 26   HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +++ +  + +V+AWG+N   Q G G     R+P LV  L  + I +V+ G SHS AWT
Sbjct: 3279 NIIKIVISKKVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVAWT 3336



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 1    MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
            M+    R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++
Sbjct: 3089 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3148

Query: 61   VLALSNKNIRQVSAG 75
            V  L    + QV+ G
Sbjct: 3149 VKVLLGHRVIQVACG 3163



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + +VD+S G+     L+V+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            +I +V  G   S A T
Sbjct: 657 LDIVKVRCGSQFSIAIT 673



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 3160 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQ 3219

Query: 472  HTVCIADKG 480
             ++ +   G
Sbjct: 3220 FSLALTKSG 3228



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 36/69 (52%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + +   +VDI+ G  H   ++  G+++ WG     +LG G+  +  +P+LV AL  
Sbjct: 4096 RVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQG 4155

Query: 67   KNIRQVSAG 75
              +  ++ G
Sbjct: 4156 YRVIDIACG 4164


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 192/426 (45%), Gaps = 60/426 (14%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTG-----------------QVFAWGNNSDAQLGL 49
            R +   +   ++ I+ G+ H +  +  G                 +V+ WG+N + QLG 
Sbjct: 4046 RQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGD 4105

Query: 50   GNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIP 109
            G     + P+LV AL  K I +V+ G +H+ +W+     P   G          LP  +P
Sbjct: 4106 GTTNAIQRPRLVAALQGKKINRVACGSAHTLSWSTSK--PTNAGK---------LPAQVP 4154

Query: 110  DHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRP 169
              Y HLQ   +  +R RL LL+  S+L    +   P+ +++    Q      +   +LR 
Sbjct: 4155 MEYNHLQEISIMALRNRLLLLHHISELFCPCI---PMFDLEGRLGQTGHGPSVGFDTLRG 4211

Query: 170  LFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSD 229
            +    +    + RS  K  L G +                  K +F Q+  ++       
Sbjct: 4212 IL---ISQGKVKRSRSKGGLAGPD----------------GTKSVFGQMCAKMSSFSPDS 4252

Query: 230  LRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRY 289
            L LP R WKVK +GE  DD GG + ++I EMC EL +G  PLL+ TPNG  ++G NRD +
Sbjct: 4253 LLLPHRVWKVKFVGESVDDCGGGYSESIAEMCEELQNGLTPLLIVTPNGRDESGANRDCF 4312

Query: 290  ILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDT 349
            +LNP     L   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D 
Sbjct: 4313 LLNPAAKSPLHMSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDK 4371

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQ 408
             +  SL  IRD       EA   E   +   F   + +G+   I    +   +T  NR +
Sbjct: 4372 DFIPSLMYIRD------NEATAEEFEAMTLPFTVPNASGQ--DIQLSSKYSHITLENRAE 4423

Query: 409  YYEAAI 414
            Y   AI
Sbjct: 4424 YVRLAI 4429



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T +G LYT+G G+YGRLGHG++ +   P  V AL  + V  V+CG    
Sbjct: 519 IACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDA 578

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 579 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 612



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 3/94 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IA G  HSA +T++G L+T+G G YGRLGHG + +   P+ V AL    V  V+CG    
Sbjct: 3901 IAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDA 3960

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             T+C+ D    V+++GDG+YGKLG G +    TP
Sbjct: 3961 QTLCLTDD-DMVWSWGDGDYGKLGRGGSDGCKTP 3993



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LY++G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 2875 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDA 2934

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 2935 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 2968



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 91/160 (56%), Gaps = 9/160 (5%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
            ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G ++P+    T  +
Sbjct: 2756 FSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSG-TIPIPRQITALS 2814

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                 + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 2815 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRD 2874

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
            ++CG +H+  I   G+ +Y++G GEYG+LG G+  T L+P
Sbjct: 2875 IACGSSHSAAITSSGE-LYSWGLGEYGRLGHGDNTTQLRP 2913



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 45/75 (60%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   IV ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 3022 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3081

Query: 69   IRQVSAGRSHSAAWT 83
            I +V+ G SHS AWT
Sbjct: 3082 ITRVACGSSHSVAWT 3096



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT ++ + P+ V  L    +  V+ G  H 
Sbjct: 2981 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHC 3040

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 3041 LAVTDTGQ-VYAWGDNDHGQQGNGTTTVNRKP 3071



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 16/109 (14%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T +G +YT+G GDY RLGHG+  + + P +V  L    V +++ G  H 
Sbjct: 4007 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHC 4066

Query: 474  VCIADKGK----------------AVYAFGDGEYGKLGLGNTGLKPTPQ 506
            VC  + G+                 VY +GD + G+LG G T     P+
Sbjct: 4067 VCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPR 4115



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 5/91 (5%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTV 474
           +H   ++SNG ++++G GD GRLGHG T   + P  + A N      HV  ++CG  ++ 
Sbjct: 468 QHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSA 527

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            I   G+ +Y +G G YG+LG G++  + TP
Sbjct: 528 AITVDGE-LYTWGRGNYGRLGHGSSEDQTTP 557



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPL--TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  Q+ P+  T    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 544 GRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 603

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ V  L  + +  V CG   +V +   G+ VY +G G+  +LG G
Sbjct: 604 GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQ-VYTWGKGDNQRLGHG 655



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            R I A  N  +  ++V  G  H +A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 2808 RQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 2867

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 2868 KAKRIRDIACGSSHSAAITS 2887



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
            + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  V V  ++ G 
Sbjct: 3846 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGG 3905

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
             H+ CI   G+ ++ +G G YG+LG G++   LKP
Sbjct: 3906 AHSACITASGE-LFTWGKGRYGRLGHGDSEDQLKP 3939



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   K P ++ +L  + V  V CG  
Sbjct: 3953 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQ 4012

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 4013 FSVALTKSG-AVYTWGKGDYHRLGHGS 4038



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 2927 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 2986

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G  V+ +G G+Y +LG G       PQ
Sbjct: 2987 FSLALTKSG-VVWTWGKGDYFRLGHGTDVHVRKPQ 3020



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +YT+G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 625 VCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHC 684

Query: 474 VCIADKGKAVYAFGDGE 490
           + + D G+ V+++G  +
Sbjct: 685 LALTDDGE-VHSWGSND 700



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  ++A
Sbjct: 3844 IRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAA 3903

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 3904 GGAHSACITA 3913



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 41/75 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +++ IV +  G++  +A++  GQV+ WG   + +LG G   + R P+L+  L  K 
Sbjct: 614 VEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKK 673

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+ G +H  A T
Sbjct: 674 VVDVAVGSTHCLALT 688



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A K + +VD++ G+     LAV+  GQV++WG+    +LG G     + P+LV  L +
Sbjct: 560 VTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 619

Query: 67  KNIRQVSAGRSHSAAWT 83
            +I +V  G   S A T
Sbjct: 620 LDIVKVCCGSQFSVALT 636



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 43/68 (63%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +VD++VG+ H LA+++ G+V +WG+N   Q       N ++P+ +  L++K+I  +S G 
Sbjct: 674 VVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTLFSNKKQPKALPGLNSKHIVGISCGP 733

Query: 77  SHSAAWTA 84
             S AW++
Sbjct: 734 GQSFAWSS 741



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 38/69 (55%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I + + + +VDI+ G  H   ++ +G++F WG     +LG G+  +  +P+LV AL  
Sbjct: 3888 RVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG 3947

Query: 67   KNIRQVSAG 75
              +  V+ G
Sbjct: 3948 HRVIDVACG 3956



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 3    GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
            G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G  ++ R
Sbjct: 2960 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVR 3017

Query: 57   EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            +PQ+V  L  K I  V+ G  H  A T
Sbjct: 3018 KPQMVEGLRGKKIVHVAVGALHCLAVT 3044



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 38/69 (55%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A K   I DI+ G+ H  A++++G++++WG     +LG G+      P+LV  L  
Sbjct: 2862 RLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLG 2921

Query: 67   KNIRQVSAG 75
              + QV+ G
Sbjct: 2922 HRVIQVACG 2930



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 3033 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3092

Query: 474  V 474
            V
Sbjct: 3093 V 3093



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 4/63 (6%)

Query: 25  EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL----SNKNIRQVSAGRSHSA 80
           +H LA+S+ G+VF+WG     +LG G+     EP ++ A     + K++  ++ G ++SA
Sbjct: 468 QHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSA 527

Query: 81  AWT 83
           A T
Sbjct: 528 AIT 530



 Score = 42.4 bits (98), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 28/47 (59%)

Query: 428  GYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
            G +YT+G+ D G+LG GTT   + P  V AL    +  V+CG  HT+
Sbjct: 4090 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136



 Score = 42.0 bits (97), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 18/75 (24%), Positives = 37/75 (49%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I +   + ++ +  G++  +A++ +G V+ WG     +LG G+  + R P+ V  L  K 
Sbjct: 3996 IDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4055

Query: 69   IRQVSAGRSHSAAWT 83
            +  ++ G  H    T
Sbjct: 4056 VIAIATGSLHCVCCT 4070



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 33/60 (55%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H+V I+ G+ +  A++  G+++ WG  +  +LG G+  +   P LV AL    +  V+ G
Sbjct: 515 HVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACG 574


>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
          Length = 850

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 191/427 (44%), Gaps = 58/427 (13%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL--GNQINYREPQLV-LA 63
           R   A     +VD ++ +EH +AV++ G+VF WG N   QLG   G++     P+++ L 
Sbjct: 282 RTAHALNTHKVVDCALSSEHGVAVTDRGEVFVWGANDHGQLGADAGSEKTIIAPRVIKLP 341

Query: 64  LSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLI 123
                + +V      + +W+   L   +  H    +         P  Y HLQ   +  +
Sbjct: 342 GEFPAVNRVHCFPYGTLSWSPSRL---SDAHETIKA--------APAVYQHLQGVDVDAL 390

Query: 124 RARLKLLNRFSDLIYQVVRL--------------LPLGNVDQDWVQCTPYSWLVHPSLRP 169
           R R  +L   S L+  ++                L LG   +       Y    H     
Sbjct: 391 RRRAYILEYASSLLLPLLPFFELNVQALGGREPSLALGGSAEGLRTLQSYIAFGHKE--- 447

Query: 170 LFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSK-------QTVKPIFAQISRQV 222
               R+    L R+   T  V      ++T+ R+  +            + +FAQ +R++
Sbjct: 448 ----RLLKSILQRTTETTARV------TITLNRVQIQRTPEGLAGPDGSQSVFAQAAREL 497

Query: 223 VKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADT 282
             +  S     SR WKVK  GEG DDAGG F ++I+EMC EL + +VPLL+ TPNG  + 
Sbjct: 498 RSVDQSVFLASSRCWKVKFRGEGLDDAGGGFSESISEMCEELRNHSVPLLIPTPNGRDEA 557

Query: 283 GYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFT 342
           G NRD ++LNP  S+S   L  F+FLG L G+AIRT  P+ L L+P VW+LI    +T  
Sbjct: 558 GDNRDAFLLNP-TSDSAYHLQLFEFLGTLIGIAIRTSSPITLQLAPCVWRLIAGLNLTIG 616

Query: 343 DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLT 402
           DL++    Y  +L  I         + +FP   P    EG  +      +V G +   LT
Sbjct: 617 DLKEVAANYVATLEFITVSPADVFEQCDFPTTTP-SSLEGVDYQ-----VVPGAR---LT 667

Query: 403 FANRLQY 409
            A R +Y
Sbjct: 668 LARRDEY 674



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL-NKVHVESVSCGLN- 471
           +  G  HSA V+  G LYT+G G YGRLGHGT+ +  VP RV A    + V  V+CGL  
Sbjct: 140 VCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGD 199

Query: 472 -HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H++C+ + G  +Y+FGDG++GKLG G    +  P+
Sbjct: 200 AHSMCVTEDGH-IYSFGDGDFGKLGHGTNDRRRQPE 234



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 7/95 (7%)

Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG    HS  VT +G++Y+FG+GD+G+LGHGT    + PER+       +  V CG +
Sbjct: 193 VACGLGDAHSMCVTEDGHIYSFGDGDFGKLGHGTNDRRRQPERI----DFDIVKVVCGSS 248

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +  I+  G A+Y +G G   +LG G   +   P+
Sbjct: 249 TSAAISLSG-ALYVWGGGRRYRLGTGTEAVIWQPR 282



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   ++   + +S  T HVLAV+  G+V++WG+NS  QLG  + +N R P  + AL  + 
Sbjct: 80  VEGLESERFIQVSA-TSHVLAVTLQGEVYSWGSNSYKQLGR-DGVNNR-PMKITALEGEE 136

Query: 69  IRQVSAGRSHSAA 81
           + QV AG  HSAA
Sbjct: 137 VVQVCAGGHHSAA 149


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 191/423 (45%), Gaps = 48/423 (11%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I +   + +  +  G++  +A++ +G V+ WG     +LG GN  + R P+ V AL  K 
Sbjct: 4616 IESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKK 4675

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI--PDHYGHLQNKPL-PLIRA 125
            I  ++ G  H  A +       T G      L  G    I  P     LQ K +  +I  
Sbjct: 4676 IISIATGSLHCVACSDGG-EVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICG 4734

Query: 126  RLKLLNRFSDLIYQVVRLLPLGNVDQDWVQ-CTPYSWLVHPSLRPLFAPRVYTLPLVRSV 184
                L   +  + + VR  P   ++ D V+   P   LV+      F   + T       
Sbjct: 4735 SAHTLALSTYQLSEAVRPPPSPPLEYDLVRDIAPEDVLVYSIKETGFRKVIQT------- 4787

Query: 185  GKTMLVGKNFGPSVTVRRLTTKSKQT-----------VKPIFAQISRQVVKMKGSDLRLP 233
              TM+  K  GP + + R+  K  +            +K +F Q+ +++  +    L +P
Sbjct: 4788 --TMVRDKPHGPVIELNRIQVKRSRMRSGNGLAGVDGMKSVFGQMVQKLPLLTQEALSMP 4845

Query: 234  SRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNP 293
             R WKVK +GE  DD GG F ++I EMC EL +G+VPLL++TPNG  + G NRD ++L+P
Sbjct: 4846 HRVWKVKFVGESVDDCGGGFSESIAEMCDELQNGSVPLLIQTPNGRGEAGANRDCFLLDP 4905

Query: 294  DLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTL--Y 351
             L+  L   M F+FLG+L G+A+RT  PL L  +    K+  +    +  L  N  +  +
Sbjct: 4906 TLTSVLHMNM-FRFLGVLMGIAVRTGSPLSLKYT----KITPENRSEYVKLALNYRIHEF 4960

Query: 352  AQSLRAIRDIHLSGVTEANFPEIIP---LECFEGASWTGRITPIVTGGQSVPLTFANRLQ 408
             + ++A+RD            ++IP   L  F  A     +  +V G   +PL     + 
Sbjct: 4961 DEQVKAVRD---------GMSKVIPVPLLSLFSAA----ELQAMVCGSPDIPLCLLKTVA 5007

Query: 409  YYE 411
             Y+
Sbjct: 5008 TYK 5010



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 5/122 (4%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
           GR+    T  + +P       +     + CG  +SA +T+ G LYT+G G YGRLGHG +
Sbjct: 660 GRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNS 719

Query: 447 MNWKVPERVVALNK---VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
            +  +P  V  L +   +HV ++ CG  H++C+ D G  VYA+GDG++GKLG G      
Sbjct: 720 EDKHLPTIVQVLKQQRVIHV-ALGCGDAHSLCVTDTG-IVYAWGDGDFGKLGNGTCNGSS 777

Query: 504 TP 505
            P
Sbjct: 778 VP 779



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V AL    V  V+CG    
Sbjct: 3385 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDA 3444

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+C+ ++G  V+++GDG++GKLG G +
Sbjct: 3445 QTLCLTEEG-LVFSWGDGDFGKLGRGGS 3471



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA +TS G++ T+G G YGRLGHG + +   P+ V AL       ++CG    
Sbjct: 4521 IACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDA 4580

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             T+CI D    V+++GDG+YGKLG G +
Sbjct: 4581 QTLCITDDDN-VWSWGDGDYGKLGRGGS 4607



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           P+     +   + A  C  +H   +T+ G ++++GNG+ GRLGHG T +  +P R+VAL 
Sbjct: 621 PIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALA 680

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  V  V CG +++  I   G+ +Y +G G YG+LG GN+  K  P
Sbjct: 681 ERQVTGVFCGSSYSAAITAAGE-LYTWGRGTYGRLGHGNSEDKHLP 725



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 48/77 (62%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV+++GQV+AWG+N   Q G GN I  ++P LVL L    
Sbjct: 3532 IQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIF 3591

Query: 69   IRQVSAGRSHSAAWTAP 85
            + +V+ G SHS AW+ P
Sbjct: 3592 VNRVACGSSHSVAWSLP 3608



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG T + + P+
Sbjct: 4607 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPK 4666

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V AL    + S++ G  H V  +D G+ V+ +GD + G+LG G       P+
Sbjct: 4667 KVAALQGKKIISIATGSLHCVACSDGGE-VFTWGDNDEGQLGDGTVSAIQRPR 4718



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 14/162 (8%)

Query: 351  YAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRITPIVTGGQSVPLTFAN 405
            Y+  L  ++ IH++G +++ F  I+  +     C EG +  GR+          P     
Sbjct: 3267 YSSVLSQLKPIHIAGGSKSLF--IVSQDGKLYACGEGTN--GRLGLGHNNNVPTPKQVPI 3322

Query: 406  RLQYY--EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
              QY   + A+  G KH+  +T +G ++++G G+ G+LGHG  +  + P+ +  L    +
Sbjct: 3323 LSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRI 3382

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
              ++CG +H+  I   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 3383 RDIACGSSHSAAITSSGE-LYTWGLGEYGRLGHGDNCTQLKP 3423



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 4/108 (3%)

Query: 402  TFANRLQYY---EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
            T    LQ+    + A+  G KH   ++S+G ++++G G+ G+LGHG   ++  P+ + AL
Sbjct: 4454 TLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEAL 4513

Query: 459  NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + + V  ++CG  H+ CI  +G  V  +G G YG+LG G++  +  P+
Sbjct: 4514 SGIGVIDIACGSAHSACITSQGH-VLTWGKGRYGRLGHGDSEDQLQPK 4560



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T +G ++T+G GDY RLGHGT  + + P  +  L    V  V+ G  H 
Sbjct: 3491 IECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHC 3550

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 3551 LAVTDSGQ-VYAWGDNDHGQQGSGNTIVNKKP 3581



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 407  LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
            L Y    IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V 
Sbjct: 4566 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVT 4625

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             V CG   +V +   G +VY +G G+Y +LG GNT
Sbjct: 4626 KVECGSQFSVALTRSG-SVYTWGKGDYHRLGHGNT 4659



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            + +P      +  ++V  G +H +A++  G+VF+WG   D +LG GN++   +P+L+  L
Sbjct: 3318 KQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETL 3377

Query: 65   SNKNIRQVSAGRSHSAAWTA 84
              K IR ++ G SHSAA T+
Sbjct: 3378 RTKRIRDIACGSSHSAAITS 3397



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 5/96 (5%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T  G ++++G+GD+G+LG G +    +P +V  LN V V  + CG  
Sbjct: 3437 VACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQ 3496

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKPTP 505
             ++ +   G+ V+ +G G+Y +LG G      KPTP
Sbjct: 3497 FSLALTKSGE-VWTWGKGDYYRLGHGTDQHVRKPTP 3531



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 45/70 (64%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            I  V ++ G +H LA+S+ G+VF+WG   D +LG GN+ +Y  P+L+ ALS   +  ++ 
Sbjct: 4464 IKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIAC 4523

Query: 75   GRSHSAAWTA 84
            G +HSA  T+
Sbjct: 4524 GSAHSACITS 4533



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 9/92 (9%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A +   I+ I+ G+ H +A S+ G+VF WG+N + QLG G     + P+LV +L  
Sbjct: 4666 KKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQG 4725

Query: 67   KNIRQVSAGRSHSAAWTA---------PPLPP 89
            K+I +V  G +H+ A +          PP PP
Sbjct: 4726 KHIVKVICGSAHTLALSTYQLSEAVRPPPSPP 4757



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 2/83 (2%)

Query: 4   TSGRHIPAFKNIHIVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           T+ + I   ++++IV ++   E  HVLA++ TG VF+WGN    +LG G+  +   P  +
Sbjct: 617 TAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRI 676

Query: 62  LALSNKNIRQVSAGRSHSAAWTA 84
           +AL+ + +  V  G S+SAA TA
Sbjct: 677 VALAERQVTGVFCGSSYSAAITA 699



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT +G +Y +G+ D+G+ G G T+  K P  V+ L+ + V  V+CG +H+
Sbjct: 3543 VAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHS 3602

Query: 474  V 474
            V
Sbjct: 3603 V 3603



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 39/67 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   I DI+ G+ H  A++++G+++ WG     +LG G+     +P+LV AL++  
Sbjct: 3374 IETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADHR 3433

Query: 69   IRQVSAG 75
            + QV+ G
Sbjct: 3434 VVQVACG 3440



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +IA G  H    +  G ++T+G+ D G+LG GT    + P  V +L   H+  V CG  H
Sbjct: 4678 SIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAH 4737

Query: 473  TVCIA 477
            T+ ++
Sbjct: 4738 TLALS 4742



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            I A   I ++DI+ G+ H   +++ G V  WG     +LG G+  +  +P+LV AL
Sbjct: 4510 IEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEAL 4565



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G  IP        + ++ I  G +  LA++ +G+V+ WG     +LG G   + R+P
Sbjct: 3470 GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKP 3529

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
              +  L  K +  V+ G  H  A T
Sbjct: 3530 TPIQGLRGKKVIHVAVGALHCLAVT 3554



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 28/43 (65%)

Query: 5   SGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
           S + I A +  +IVD++VG  H LA++ +G+++ WG N   QL
Sbjct: 831 SPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQL 873


>gi|74183443|dbj|BAE36593.1| unnamed protein product [Mus musculus]
          Length = 505

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 157/317 (49%), Gaps = 22/317 (6%)

Query: 108 IPDHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPS 166
           +P  Y HLQ  P+  +R RL LL+  S+L    + +  L G++D+  +  +    +   +
Sbjct: 2   VPMEYNHLQEIPIIALRNRLLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDT 57

Query: 167 LRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQ 217
           LR +   +       + V  TM+  +  GP V + R+  K  ++          K +F Q
Sbjct: 58  LRGILISQGKEAAFRKVVQATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQ 117

Query: 218 ISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPN 277
           +  ++       L LP R WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPN
Sbjct: 118 MCAKMSSFSPDSLLLPHRVWKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPN 177

Query: 278 GVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQE 337
           G  ++G NRD Y+LNP     +   M F+FLG+L G+AIRT  PL L L+  VWK +   
Sbjct: 178 GRDESGANRDCYLLNPATRAPVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGM 236

Query: 338 PVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQ 397
            +T  DL + D  +   L  IRD   +  T   F E + L  F   S +G+   I    +
Sbjct: 237 SLTIADLSEVDKDFIPGLMYIRD---NEATSEEF-EAMSLS-FTVPSASGQ--DIQLSSK 289

Query: 398 SVPLTFANRLQYYEAAI 414
              +T  NR +Y   AI
Sbjct: 290 HTHITLDNRAEYVRLAI 306


>gi|26330746|dbj|BAC29103.1| unnamed protein product [Mus musculus]
          Length = 233

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/182 (42%), Positives = 103/182 (56%), Gaps = 17/182 (9%)

Query: 303 MHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIH 362
           M FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I 
Sbjct: 1   MQFKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIE 60

Query: 363 LSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSA 422
            SG+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI        
Sbjct: 61  DSGITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE------- 113

Query: 423 VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGK 481
                   Y     D         M+W VP  +++ L    +E + CG+   +C+    K
Sbjct: 114 --------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGMPE-ICVDVLKK 164

Query: 482 AV 483
            V
Sbjct: 165 VV 166


>gi|403257167|ref|XP_003921202.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Saimiri
           boliviensis boliviensis]
          Length = 285

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 98/169 (57%), Gaps = 16/169 (9%)

Query: 303 MHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIH 362
           M FKFLGIL GVAIRTKKPL L L+PLVWK +   P+T  DLE+ D LY Q+L +I  I 
Sbjct: 1   MQFKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIE 60

Query: 363 LSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSA 422
            SG+TE +F E+IPL+ F G S  G++ PI+ GG S+PLTF+NR +Y E AI        
Sbjct: 61  DSGITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE------- 113

Query: 423 VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
                   Y     D         M+W +P  +++ L    +E + CG+
Sbjct: 114 --------YRLHEMDRQVAAVREGMSWILPVPLLSLLTAKQLEQMVCGM 154


>gi|301118344|ref|XP_002906900.1| HECT E3 ubiquitin ligase, putative [Phytophthora infestans T30-4]
 gi|262108249|gb|EEY66301.1| HECT E3 ubiquitin ligase, putative [Phytophthora infestans T30-4]
          Length = 5129

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 123  IRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRP--LFAPRVYTLPL 180
            +  R K+L  F+  +Y   R+LP        V    +S      +    +   R   L +
Sbjct: 4655 LSKRFKVLQEFNAAVY---RILPFIAFHAPRVDTVDFSTTGQKFMLSDLVMEQRHRILSV 4711

Query: 181  VR------SVGKTMLVGKNFG-----PSVTVRRLTTKSK-QTVKPIFAQISRQVVKMKGS 228
            V+      ++G+T   G +F      P     R T K+  +    +F+Q  RQ+  + G+
Sbjct: 4712 VKRTVWDSALGRTNESGVSFELTLNRPKAMRCRATGKTDVEGRHTLFSQAFRQLQALDGT 4771

Query: 229  DLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDR 288
              R     + V  LGE A DAGG + +T  + C EL S  +PL++ TPN   + G  R++
Sbjct: 4772 HFRREDALYHVTFLGENAQDAGGPYRETFAQYCEELQSSQLPLMLPTPNSQHNVGVGREK 4831

Query: 289  YILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDND 348
            ++L+P  ++S  +L   +FLG L G +IR+K+ L L L+PLVWK +  E +   DL   D
Sbjct: 4832 WLLSPG-AQSSTTLQMLEFLGKLMGASIRSKQYLALNLAPLVWKKLAGERLVLDDLAAVD 4890

Query: 349  TLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQ 408
            ++   S+  +R I   GVTE  F +I+ +E F       R+  +  GG  +P+TF++R +
Sbjct: 4891 SMLVNSMSRMRTIDRYGVTEEMFEDIV-METFTTLGADNRVVELKDGGAHLPVTFSSRCE 4949

Query: 409  YYE 411
            Y +
Sbjct: 4950 YAD 4952


>gi|326436402|gb|EGD81972.1| hypothetical protein PTSG_02656 [Salpingoeca sp. ATCC 50818]
          Length = 5125

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 94/148 (63%), Gaps = 1/148 (0%)

Query: 214  IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLV 273
            +FAQ  R++     S    P+R WKVK  GEG DDAGG + ++I+EMC EL++G++ LL+
Sbjct: 4761 VFAQACRELRNADPSVFLAPNRCWKVKFAGEGVDDAGGGYSESISEMCEELVNGSLTLLI 4820

Query: 274  RTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKL 333
             TPN V D+G +RD Y+ NP  + S   L  F+FLG+L G+AIRT  P+ LPL+  VWK 
Sbjct: 4821 PTPNKVQDSGDSRDVYLFNP-AANSPAELELFEFLGVLIGIAIRTNNPISLPLAGPVWKQ 4879

Query: 334  IVQEPVTFTDLEDNDTLYAQSLRAIRDI 361
            +    +T  DL + DT Y  +L  I+ +
Sbjct: 4880 LTGVALTIADLREVDTDYVTTLEIIKSL 4907



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 17/108 (15%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK--VHVESVSCGLN 471
           +A G +HSA V+ +G LYT+G G YGRLGHGT+ +   P+ V+AL    + + +V+CG+ 
Sbjct: 186 VAVGGQHSAAVSEDGVLYTWGRGSYGRLGHGTSDDVAFPQPVLALKSKDILIATVACGIG 245

Query: 472 --HTVCIADKGKAVYAFGDGEY------------GKLGLGNTGLKPTP 505
             HT+ ++  G  +YAFGDG+Y            GKLGLG+T     P
Sbjct: 246 DAHTLALSRDG-VIYAFGDGDYGWGPAPATGGASGKLGLGSTERTRVP 292



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG +HSA VT+ G LY +G   +GRLG G   +   P  V  L  V +  V+CG  HT
Sbjct: 3201 VACGRRHSAAVTATGQLYMWGCNHHGRLGLGDQNDRYEPTLVPNLPPVQM--VACGDRHT 3258

Query: 474  VCIADKGKAVYAFGDGEYGKLGL 496
            + +  +G  VY+FG G+ G+LG+
Sbjct: 3259 LVLTQRG-GVYSFGCGDQGRLGI 3280



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +ACG +H+ V+T  G +Y+FG GD GRLG     +  +    +   +  +  V CG N +
Sbjct: 3251 VACGDRHTLVLTQRGGVYSFGCGDQGRLGIPEAPHKLLRPAKLDFGRARMTRVICGCNSS 3310

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGN 498
              + D G+ +Y +G G   +LG G+
Sbjct: 3311 AALTDTGQ-LYVWGTGRSYRLGTGS 3334



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 16/103 (15%)

Query: 412 AAIACGF--KHSAVVTSNGYLYTFGNGDY------------GRLGHGTTMNWKVPERV-V 456
           A +ACG    H+  ++ +G +Y FG+GDY            G+LG G+T   +VP  +  
Sbjct: 238 ATVACGIGDAHTLALSRDGVIYAFGDGDYGWGPAPATGGASGKLGLGSTERTRVPVAIPC 297

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             +   V+ V CG   + C+ + G A+Y +G+   G LG G +
Sbjct: 298 DFDGTKVKQVWCGRQISACLTE-GGALYTWGNASGGALGNGES 339



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 3/68 (4%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL--ALSNKNIRQVSA 74
            IVD S+G EH +AVS TG VF WG+N  +QLG G   +   P+ +L   L  K + +VS 
Sbjct: 3352 IVDASLGHEHGVAVSETGDVFVWGSNDSSQLG-GATADAAAPRPLLHPELRGKGLNRVSC 3410

Query: 75   GRSHSAAW 82
            G    A W
Sbjct: 3411 GSRAVAVW 3418



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG   SA +T  G LY +G G   RLG G+  +  +P RV  L    +   S G  H 
Sbjct: 3303 VICGCNSSAALTDTGQLYVWGTGRSYRLGTGSMTSHMLPIRVTDLASHKIVDASLGHEHG 3362

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V +++ G  V+ +G  +  +LG G T     P+
Sbjct: 3363 VAVSETGD-VFVWGSNDSSQLG-GATADAAAPR 3393



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +P  +++  + ++ G  H  AV+ TGQ++ WG N   +LGLG+Q +  EP LV  L    
Sbjct: 3192 VPGLRDV--LRVACGRRHSAAVTATGQLYMWGCNHHGRLGLGDQNDRYEPTLVPNL--PP 3247

Query: 69   IRQVSAGRSHSAAWT 83
            ++ V+ G  H+   T
Sbjct: 3248 VQMVACGDRHTLVLT 3262



 Score = 45.1 bits (105), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 33/58 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           F    IV ++VG +H  AVS  G ++ WG  S  +LG G   +   PQ VLAL +K+I
Sbjct: 178 FGRSSIVYVAVGGQHSAAVSEDGVLYTWGRGSYGRLGHGTSDDVAFPQPVLALKSKDI 235



 Score = 42.0 bits (97), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H+ VVT +  L   G G  G+LG   T +      V  L  V    V+CG  H+
Sbjct: 3151 VAYGGYHTLVVTEDHRLLVCGTGKNGKLGLRDTRDQSSLVPVPGLRDVL--RVACGRRHS 3208

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +   G+ +Y +G   +G+LGLG+   +  P
Sbjct: 3209 AAVTATGQ-LYMWGCNHHGRLGLGDQNDRYEP 3239



 Score = 42.0 bits (97), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNHTV 474
               H   +T+ G +Y++G+  Y +LG     +  VP ++     +  +  V+ G  H+ 
Sbjct: 137 AAIDHVLALTTRGEVYSWGSNSYAQLGRND--DPIVPTKITRGFGRSSIVYVAVGGQHSA 194

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +++ G  +Y +G G YG+LG G +     PQ
Sbjct: 195 AVSEDG-VLYTWGRGSYGRLGHGTSDDVAFPQ 225



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +N   V ++   +HVLA++  G+V++WG+NS AQLG  N       ++       +
Sbjct: 125 VSGLENERFVQVA-AIDHVLALTTRGEVYSWGSNSYAQLGR-NDDPIVPTKITRGFGRSS 182

Query: 69  IRQVSAGRSHSAA 81
           I  V+ G  HSAA
Sbjct: 183 IVYVAVGGQHSAA 195


>gi|348688975|gb|EGZ28789.1| hypothetical protein PHYSODRAFT_309534 [Phytophthora sojae]
          Length = 5235

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 168/376 (44%), Gaps = 39/376 (10%)

Query: 48   GLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
            GL + I  +E +LV   +   I   S   SH A    PP     P  +            
Sbjct: 4710 GLWSDIAPQENELVRWPALVEIVTSSGNESH-AEKNEPPQSSDAPTKS------------ 4756

Query: 108  IPDHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSL 167
            + D +G L          R KLL  F+  IY ++  +       D     P    +  +L
Sbjct: 4757 VVDTHGRLSK--------RFKLLQEFNSAIYWILPFVAFHAPSGD--TSLPERQFLLSNL 4806

Query: 168  RPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVR---------RLTTKSKQTVK---PIF 215
              L   R   L +V+       +G+    SV+           R  T  K   +    +F
Sbjct: 4807 --LMEHRHRILSVVKRTVWDSALGRTNESSVSFELTLNRPKAMRFRTTGKTDTEGRHTLF 4864

Query: 216  AQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRT 275
            +Q  RQ+  + G+  R     + V  LGE A DAGG + +T  + C EL S  +PL++ T
Sbjct: 4865 SQAFRQLQALDGTHFRREDALYHVTFLGENAQDAGGPYRETFAQYCEELQSTQLPLMLPT 4924

Query: 276  PNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIV 335
            PN   + G  R++++L+P  ++S  +L   +FLG L G +IR+K+ L L L+P+VWK + 
Sbjct: 4925 PNSQHNVGVGREKWLLSPG-AQSTTALQMLEFLGKLMGSSIRSKQYLALNLAPIVWKRLA 4983

Query: 336  QEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTG 395
             E +   DL   D++   S+  +R I   GVTE  F +I+ +E F       R+  +  G
Sbjct: 4984 GERLGLDDLAAVDSMLVNSMSKMRTIDRYGVTEEMFEDIV-METFTTLGADNRVIELKPG 5042

Query: 396  GQSVPLTFANRLQYYE 411
            G  +P+TF +R +Y +
Sbjct: 5043 GAHLPVTFTSRCEYAD 5058


>gi|298706385|emb|CBJ29394.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 4224

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 167/361 (46%), Gaps = 39/361 (10%)

Query: 86   PLPP-HTPGHTPSSSLRLGLPQDIPDHYGHLQNK--PLPLIRARLKLLNRFSDLIYQVVR 142
            PLPP    G+  S++      +D        Q +   L ++  R  LL + +  + +V+R
Sbjct: 3695 PLPPVRKAGNAGSTAEETPGEEDQQRRESEWQQRLGELAVLPTRFHLLQQLNRGVSKVLR 3754

Query: 143  LLPLGNVDQDWVQCTPYSWLVHPSLRPLFA-------PRVYTLPLVRSVGKTMLVGKNFG 195
             + L   D  W      S   H     L          R    P   +V  +   G+   
Sbjct: 3755 YVDLSQGDLPWSVARLLSRCRHLVFFALRQEAWQAELARTSRPPAAAAVAHSS--GEATP 3812

Query: 196  PSVTVR---------------RLTTKSKQTVKPIFAQISRQVVKMKGSDLRL-PSRA-WK 238
            PS+ +R               R   K +QT   +F Q    +   + S  RL P    + 
Sbjct: 3813 PSLELRLSRGRAARHAGLGTLRADQKGRQT---LFCQAFFSLRNTEESLFRLRPGEVLYS 3869

Query: 239  VKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDL--- 295
               +GE A DAGG + ++  E C EL SGA+PLL++ PN V D G NR++++ NP +   
Sbjct: 3870 TVFVGEHAHDAGGPYRESFAEYCAELQSGALPLLIKCPNSVNDVGINREKWLPNPAIGKV 3929

Query: 296  --SESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQ 353
              S +L + M   FLG L GVAIR+++PL L L  +VWK +V+ P+T  DLE  D    Q
Sbjct: 3930 GPSAALHAEM-LGFLGRLMGVAIRSQEPLDLDLPSIVWKQLVRSPITRDDLEAVDFALTQ 3988

Query: 354  SLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVT-GGQSVPLTFANRLQYYEA 412
            SL+A+R+IHL GV        + L  FE A+  G    + T GG +  +T  NRL++ + 
Sbjct: 3989 SLKAVRNIHLRGVATDEAFRDLGLGGFEVATADGGRAGLPTPGGAAREVTLDNRLEFADM 4048

Query: 413  A 413
            A
Sbjct: 4049 A 4049


>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
          Length = 409

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 25/280 (8%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 145 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 204

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
           K + +V+ G +H+ AW+            P+S+ +L  P  +P  Y HLQ  P+  +R R
Sbjct: 205 KKVNRVACGSAHTLAWSTSK---------PASAGKL--PAQVPMEYNHLQEIPIIALRNR 253

Query: 127 LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
           L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 254 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 309

Query: 186 KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
            TM+  +  GP V + R+  K  ++          K +F Q+  ++       L LP R 
Sbjct: 310 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 369

Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTP 276
           WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TP
Sbjct: 370 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTP 409



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN--H 472
           A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG     
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+C+ D    V+++GDG+YGKLG G +
Sbjct: 61  TLCLTDD-DTVWSWGDGDYGKLGRGGS 86



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 1/111 (0%)

Query: 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P +V
Sbjct: 88  GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 147

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 148 QGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 197



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 52  IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 111

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +V +   G AVY +G G+Y +LG G+
Sbjct: 112 FSVALTKSG-AVYTWGKGDYHRLGHGS 137



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 157 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 216

Query: 473 TV 474
           T+
Sbjct: 217 TL 218


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/92 (64%), Positives = 72/92 (78%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CGFKHSAVVT++G L+TFGNGDYGRLG GTT N KVP RVVAL    +  V+CGLNHT
Sbjct: 1943 LSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHT 2002

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +C++  G  V+AFGDG++GKLG GNT  K  P
Sbjct: 2003 LCVSADGTNVWAFGDGDFGKLGQGNTVGKHLP 2034



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALS 65
            + + +     I D+  G EH L +++ G V+ WG+NS+ QLGLG+  +  REPQLV  L+
Sbjct: 2087 QEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTNSPVREPQLVPCLT 2146

Query: 66   NKNIRQV 72
             KNIRQV
Sbjct: 2147 GKNIRQV 2153



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%)

Query: 387  GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGT 445
            GR+    T  + VP        +    +ACG  H+  V+++G  ++ FG+GD+G+LG G 
Sbjct: 1968 GRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGN 2027

Query: 446  TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            T+   +P ++ AL    ++ V+CG   +V ++  GK V+ +G
Sbjct: 2028 TVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYGK-VFTWG 2068



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 4/96 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--- 470
            I CG   + VV +NG +   G G YGRLG G + +      + ++    V  ++  +   
Sbjct: 1836 IVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSD 1895

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             HT+ + + G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 1896 GHTLAVTESGE-VFSWGDGDYGKLGHGNSDRQRRPR 1930



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 21   SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
            SVG++ H LAV+ +G+VF+WG+    +LG GN    R P+ + AL  + + Q+S G  HS
Sbjct: 1891 SVGSDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHS 1950

Query: 80   AAWTA 84
            A  TA
Sbjct: 1951 AVVTA 1955



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A +   ++ +S G +H   V+  G++F +GN    +LGLG   N + P  V+AL +
Sbjct: 1930 RQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALES 1989

Query: 67   KNIRQVSAGRSHSAAWTA 84
              I  V+ G +H+   +A
Sbjct: 1990 HQIGYVACGLNHTLCVSA 2007


>gi|357610091|gb|EHJ66823.1| putative hect domain and RCC1-like domain 2 [Danaus plexippus]
          Length = 431

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 10/205 (4%)

Query: 211 VKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVP 270
           ++ +F Q+  ++  +    L LP R WKVK +GE  DD GG + ++I EMC EL +G++P
Sbjct: 34  MRSVFGQMVARLPALTQDALALPHRVWKVKFVGESVDDCGGGYSESIAEMCEELQNGSLP 93

Query: 271 LLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLV 330
           LL+ TPNG  D G +RD ++LNP  +  L  L  F+FLG+L G+AIRT  PL L L+  V
Sbjct: 94  LLMATPNGRGDAGASRDAFLLNPTANTPLH-LNCFRFLGVLMGIAIRTGSPLSLSLAEGV 152

Query: 331 WKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRI 389
           W+ +  +P+   DL + D  +  +L  IRD+       A   E+  LE  F   S  G  
Sbjct: 153 WRQLAGQPLRPQDLAEVDKDFLPALLCIRDM------TATNKELQNLELPFSIPSAAGHE 206

Query: 390 TPIVTGGQSVPLTFANRLQYYEAAI 414
            P+ T  + V  T  N+ +Y + A+
Sbjct: 207 VPLSTRHKRV--TPDNKDEYVQLAL 229


>gi|298712107|emb|CBJ32988.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1596

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 113/202 (55%), Gaps = 6/202 (2%)

Query: 214  IFAQISRQVV----KMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAV 269
            IF  I   V+     M    LR  S+ +    +GE + DAGG + ++ +    EL S A+
Sbjct: 1203 IFRAIKESVLLSMNTMHPRSLRTHSKLYNCVFMGERSQDAGGPYRESWSMYAQELQSSAL 1262

Query: 270  PLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPL 329
            PLL+RTPNGV   G  RDRY+ NP  +   Q  M F FLG + G A+R+K+ + L LS +
Sbjct: 1263 PLLIRTPNGVHAAGMGRDRYVPNPGATSPDQVEM-FVFLGKIMGHAMRSKEYIGLNLSVV 1321

Query: 330  VWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRI 389
            VWK +V + V  +DLE+ D L  +S++ IR I   GVT   F +I+ +E F   S   R 
Sbjct: 1322 VWKALVGQEVQLSDLENVDVLLTRSMQDIRTIDQKGVTRTLFSDIV-MENFTAVSLDNRE 1380

Query: 390  TPIVTGGQSVPLTFANRLQYYE 411
              +  GG+++ +T+ NR +Y +
Sbjct: 1381 VELKPGGKNISVTWDNRFEYAD 1402


>gi|21739679|emb|CAD38880.1| hypothetical protein [Homo sapiens]
          Length = 523

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 114/224 (50%), Gaps = 14/224 (6%)

Query: 196 PSVTVRRLTTKS----KQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGG 251
           P + V+R  +K         K +F Q+  ++       L LP R WKVK +GE  DD GG
Sbjct: 110 PPLQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRVWKVKFVGESVDDCGG 169

Query: 252 VFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGIL 311
            + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y+L+P     + S M F+FLG+L
Sbjct: 170 GYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAARAPVHSSM-FRFLGVL 228

Query: 312 FGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANF 371
            G+AIRT  PL L L+  VWK +    +T  DL + D  +   L  IRD       EA  
Sbjct: 229 LGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRD------NEATS 282

Query: 372 PEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            E   +   F   S +G+   I    +   +T  NR +Y   AI
Sbjct: 283 EEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 324


>gi|167531525|ref|XP_001748172.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773292|gb|EDQ86933.1| predicted protein [Monosiga brevicollis MX1]
          Length = 4098

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 137/277 (49%), Gaps = 36/277 (12%)

Query: 108  IPDHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSL 167
            +P     L + P+  +RAR   L    D+I  V   L L    QD       +W+  P  
Sbjct: 3655 LPATLDGLAHLPIQALRARYGTLRWAGDMI--VAPHLKLLQFLQDPKLHRARAWISMPLK 3712

Query: 168  RPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKS----------------KQTV 211
              L         L + +  TM      GP++ V RL  +S                 +  
Sbjct: 3713 EEL---------LKQHLTSTMRTEAEHGPTLRVDRLRAQSLEAWDVQSNRLRLPTLAEEA 3763

Query: 212  KPIFAQISRQV---VKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGA 268
            + ++AQI+ Q+   VK     L L S+ WK++LLGEG DD GGV+ ++ TE   EL    
Sbjct: 3764 RTVYAQIAEQLAVHVKEDARFLHLASKFWKIRLLGEGGDDYGGVYAESTTECLSELRDIK 3823

Query: 269  VPLLVRTPNGVADTGYNRDRYILNPDL----SESLQSLMHFKFLGILFGVAIRTKKPLPL 324
              +LV TPNGVAD G  RD  ++NPDL    SE  ++L+H  FLG L G +IR+ +P+ L
Sbjct: 3824 TRVLVPTPNGVADHGSQRDLLLINPDLRPFESEHDRTLLH--FLGYLIGFSIRSGEPIDL 3881

Query: 325  PLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDI 361
            PL+P +W +++   +T  D+ + D  +A++L  IR +
Sbjct: 3882 PLAPCMWSMLLGTALTAEDVPEVDLSFARTLNQIRAL 3918


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 1/209 (0%)

Query: 204  TTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGE 263
            +T+       +F Q   Q+  ++ S LR   RA+K +  GE  DD GG++ + + ++  E
Sbjct: 6486 STEQSDIKDTVFDQAFAQLHYIQPSLLRGSDRAFKCQFAGEFGDDFGGLYRECLAQISCE 6545

Query: 264  LLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLP 323
            L S A+PL    PN    TG NR++++ N       +++  ++FLG L G+AIRTK PL 
Sbjct: 6546 LQSKALPLFQPCPNAHNATGENREQFVPNVQARSDNRNVEMYEFLGKLIGIAIRTKTPLD 6605

Query: 324  LPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGA 383
            L L  +VWKL+V EPV   D+E       + +  I++I   G+TE+ F EI+    F   
Sbjct: 6606 LNLPTVVWKLLVGEPVCRNDIEQIHRGCFKIVDTIQNIENHGITESMFDEIVDTN-FTVM 6664

Query: 384  SWTGRITPIVTGGQSVPLTFANRLQYYEA 412
            S T  +  +VTGG+ V +T+ ++  Y  A
Sbjct: 6665 SSTNEVVELVTGGEDVRVTWQDKEIYARA 6693



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
            R +Y+    A  + HSAVV++NG L TFG  D G+LG   T +   P+ V  L+   V  
Sbjct: 3272 REKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGR 3331

Query: 466  VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            V+CGL HTV I D G  VY+FG  EYG+LGL +T     P
Sbjct: 3332 VACGLYHTVAIVDDGD-VYSFGKNEYGQLGLSHTQNTKVP 3370



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG+ H+  +TS G  Y+FG  DYG+LG G+ ++  +P  +   +   +   +CG  HT
Sbjct: 597 VACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHT 656

Query: 474 VCIADKGKAVYAFGDGEYGKLG-LGNT-GLKPTP 505
           + ++D G+ V+ FG    G+LG  GNT  L P P
Sbjct: 657 LLMSDSGQ-VFVFGRNNKGQLGNRGNTDSLLPVP 689



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 2/105 (1%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T  QS P      L ++ + ++CG  H  + T +G ++T G  D+G+LG G     KVP 
Sbjct: 526 TQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVPT 585

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           +VV  N++ V  V+CG  H   I   G   Y+FG  +YG+LG+G+
Sbjct: 586 QVVLPNEL-VCFVACGYYHATAITSTG-LTYSFGRNDYGQLGIGS 628



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 1/93 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           + A  + HSA+V+ +G LYTFG  D G+LG   T +   P+ V AL   HV  VSCGL H
Sbjct: 493 SAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYH 552

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            V     G+ V+  G  ++G+LGLG+      P
Sbjct: 553 MVLCTISGE-VFTCGKNDHGQLGLGHNKQVKVP 584



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 14/104 (13%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----------ALNKVH 462
            +ACG  H+  +  +G +Y+FG  +YG+LG   T N KVP  V            A+NK  
Sbjct: 3332 VACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNK-- 3389

Query: 463  VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               V CG  HTV I + GK V  +G  +YG+LG+G+   K   Q
Sbjct: 3390 AVQVYCGYYHTVTILECGKVV-TWGRNDYGQLGIGSKEHKSIAQ 3432



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 61/106 (57%), Gaps = 8/106 (7%)

Query: 404 ANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH---GTTMNWKVPERVVALNK 460
           ++R++Y  A+  C  +H   +T  G  Y++G  D G+LGH   GT +   +P+ + ++ +
Sbjct: 433 SHRVKYINASNGC--EHLIAITDTGLAYSWGYNDRGQLGHENVGTKL--YLPKLIESIKE 488

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++S +   +H+  ++  G+ +Y FG  + G+LGL +T  + TPQ
Sbjct: 489 KKMKSAAVSYHHSALVSVSGE-LYTFGMNDCGQLGLDHTQHQSTPQ 533



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 9    IPAFKNIHI--VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALS 65
            IPA   I I  V  S G EH+LA+S+ G V++WG N   QLGLG  ++    P+++ +L 
Sbjct: 3213 IPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLR 3272

Query: 66   NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRA 125
             K     +A   H +A  +      T G   S  L L       DH  H Q+ P  +   
Sbjct: 3273 EKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGL-------DHTQH-QHTPQLVETL 3324

Query: 126  RLKLLNRFSDLIYQVVRLLPLGNV 149
              + + R +  +Y  V ++  G+V
Sbjct: 3325 SSQKVGRVACGLYHTVAIVDDGDV 3348



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG+ H+  +   G + T+G  DYG+LG G+  +  + + V       V+  SCG  HT
Sbjct: 3393 VYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHT 3452

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGL 501
            + +   G+ +  FG    G+LG+ +  L
Sbjct: 3453 LLLLVNGRPM-VFGRNNKGQLGVASRSL 3479



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGL 470
            A + G +H   ++ +G +Y++G  D G+LG GTT++     RV+     K  +   +   
Sbjct: 3225 AASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSY 3284

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +H+  +++ G  +  FG  + G+LGL +T  + TPQ
Sbjct: 3285 HHSAVVSNNGD-LLTFGMNDSGQLGLDHTQHQHTPQ 3319



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 3/77 (3%)

Query: 7   RHIPAFKN--IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLA 63
           R I A ++  +  ++ S G EH++A+++TG  ++WG N   QLG  N       P+L+ +
Sbjct: 426 RPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYLPKLIES 485

Query: 64  LSNKNIRQVSAGRSHSA 80
           +  K ++  +    HSA
Sbjct: 486 IKEKKMKSAAVSYHHSA 502



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 24/105 (22%)

Query: 416 CGFKHS----------AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL------- 458
           CG+ H           A++TS+G + T G    G+ GHG        ERV+ L       
Sbjct: 378 CGWDHIRQVVSGNEILAILTSDGVVLTCGLNKSGQCGHG-----NFDERVMLLRPIQALR 432

Query: 459 -NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
            ++V   + S G  H + I D G A Y++G  + G+LG  N G K
Sbjct: 433 SHRVKYINASNGCEHLIAITDTGLA-YSWGYNDRGQLGHENVGTK 476



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 4/103 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A    H+  +S G  H++  + +G+VF  G N   QLGLG+    + P  V+ L N+ 
Sbjct: 535 VKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVPTQVV-LPNEL 593

Query: 69  IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG--LPQDIP 109
           +  V+ G  H+ A T+  L  ++ G      L +G  + Q+IP
Sbjct: 594 VCFVACGYYHATAITSTGL-TYSFGRNDYGQLGIGSKIHQNIP 635



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 35/70 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I + K   +   +V   H   VS +G+++ +G N   QLGL +  +   PQLV AL   +
Sbjct: 483 IESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHH 542

Query: 69  IRQVSAGRSH 78
           +  VS G  H
Sbjct: 543 VSMVSCGLYH 552


>gi|340057434|emb|CCC51780.1| putative ubiquitin-protein ligase, fragment [Trypanosoma vivax Y486]
          Length = 3586

 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 12/261 (4%)

Query: 164  HPSL--RPLFAPRVYTLPLVRS------VGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIF 215
            HP++  +   A R +    +R+      V +T +  ++F  S+   +   K+      +F
Sbjct: 3171 HPNITTKLFLACRTFIFASIRNELVDDIVRETNVRCEHFRISINRMKARAKNNTWTSSVF 3230

Query: 216  AQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRT 275
             Q    V        R   R W V  LGEG++D GG F + I EMC EL+S A+PL V T
Sbjct: 3231 GQTFSLVADQNPRIFRTNKRFWSVMFLGEGSEDVGGPFREHIGEMCRELMSTALPLFVPT 3290

Query: 276  PNGVADTGYNRDRYILNPDLSESLQS-LMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLI 334
             N V +TG  RD ++  P  S +  S L  F F+G L G A+R+ +PL     PLVWK +
Sbjct: 3291 ANNVHNTGSYRDAFV--PAASATGASELSAFVFVGQLMGGALRSNEPLSFFFPPLVWKFL 3348

Query: 335  VQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVT 394
               P+  +D++D D +  Q +R  R +     +   F E+   E F      G I  ++ 
Sbjct: 3349 CFYPIVESDIDDVDRICLQCIREFRSLRAHVGSGDMFDEVFDTETFTTRLSDGSIKELIP 3408

Query: 395  GGQSVPLTFANRLQYYEAAIA 415
            GG +  +TF  R + Y  A++
Sbjct: 3409 GGSTTRVTF-ERCEEYANAVS 3428


>gi|32822836|gb|AAH54829.1| Herc2 protein, partial [Mus musculus]
          Length = 386

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 99/186 (53%), Gaps = 10/186 (5%)

Query: 230 LRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRY 289
           L LP R WKVK +GE  DD GG + ++I E+C EL +G  PLL+ TPNG  ++G NRD Y
Sbjct: 11  LLLPHRVWKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCY 70

Query: 290 ILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDT 349
           +LNP     +   M F+FLG+L G+AIRT  PL L L+  VWK +    +T  DL + D 
Sbjct: 71  LLNPATRAPVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDK 129

Query: 350 LYAQSLRAIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQ 408
            +   L  IRD       EA   E   +   F   S +G+   I    +   +T  NR +
Sbjct: 130 DFIPGLMYIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAE 181

Query: 409 YYEAAI 414
           Y   AI
Sbjct: 182 YVRLAI 187


>gi|290995711|ref|XP_002680426.1| ubiquitin protein ligase [Naegleria gruberi]
 gi|284094047|gb|EFC47682.1| ubiquitin protein ligase [Naegleria gruberi]
          Length = 4313

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 12/217 (5%)

Query: 204  TTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGE 263
            T + +     +F Q   QV  M    L     +WKV L+GE ADD GG F ++++ MC E
Sbjct: 3917 TDRQRNAFNSLFIQAFNQVKSMHPKILSRKQASWKVTLIGEAADDYGGPFRESLSNMCQE 3976

Query: 264  LLSG---AVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKK 320
            L++     + L + TPN V+  G NRD+++  P  S S Q L  ++F+G+L G+ I TK 
Sbjct: 3977 LIANDPSVLDLFIPTPNKVSGQGDNRDKFVPTPK-STSDQHLKWYEFVGMLMGIGILTKN 4035

Query: 321  PLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAI--------RDIHLSGVTEANFP 372
             LP     L+WK +V E + +TDL   D     ++++I         D  L  + E +F 
Sbjct: 4036 VLPFDYPSLIWKSLVNEKIGWTDLRSFDEEIYNAMKSILELGDVDDSDYELKSIMEDSFS 4095

Query: 373  EIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQY 409
            +             G+   +V  G ++ L++ NR QY
Sbjct: 4096 QTYYGRMLTTMGSDGKEVELVPNGTNIELSYNNRKQY 4132


>gi|428182222|gb|EKX51083.1| hypothetical protein GUITHDRAFT_92713 [Guillardia theta CCMP2712]
          Length = 687

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 106/201 (52%), Gaps = 22/201 (10%)

Query: 236 AWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDL 295
           AW+V  +GEG DD GG+F ++I E+  +L S A PL + +PNG  + G++RD ++ NP  
Sbjct: 283 AWQVSFVGEGGDDYGGLFRESIRELAADLQSPATPLFIPSPNGRFNIGFHRDTFVPNPTC 342

Query: 296 SESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSL 355
           + ++  +  + F+G + G  IRT  PL L   PL+W+  +QEPV+  DL   D  + +++
Sbjct: 343 TSAV-PMRQYTFIGKIMGAGIRTNNPLGLDFPPLIWRRFLQEPVSVQDLSGVDERFVRAI 401

Query: 356 RAIRDIHLSGV-TEANFPEIIPL--------ECFEGAS-------WT-----GRITPIVT 394
            AIR    +   TE  F  +  +           E +S       WT     G++  +V 
Sbjct: 402 EAIRTHPCADTWTELGFSPVAAVVGGSAANNSTLEDSSFNYVGLVWTVRSISGKVFELVK 461

Query: 395 GGQSVPLTFANRLQYYEAAIA 415
           GG + P+ ++ R QY + A +
Sbjct: 462 GGSTRPVLYSEREQYAKEATS 482


>gi|301113570|ref|XP_002998555.1| HECT E3 ubiquitin ligase, putative [Phytophthora infestans T30-4]
 gi|262111856|gb|EEY69908.1| HECT E3 ubiquitin ligase, putative [Phytophthora infestans T30-4]
          Length = 4814

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 140/314 (44%), Gaps = 26/314 (8%)

Query: 120  LPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLP 179
            L  ++ R  LL   +  ++  + LL L +    W        L H     +    V    
Sbjct: 4350 LESLQLRFALLKYLNLSLHHCLPLLDLRDTKSAWTIAYRLRQLSHCVFFDVKGALVEA-- 4407

Query: 180  LVRSVGKTMLVGKNFGPSVTVRRLT--------TKSKQTVKP-----IFAQISRQVVKMK 226
               +V  T + G+  G S    R+T        ++  + V+P      FAQ  RQ+  + 
Sbjct: 4408 ---AVEATNVPGETSGSSQQTARITLDRMQALESRDDREVEPSVSECFFAQAFRQLHAVD 4464

Query: 227  GSDLRL----PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADT 282
             + LR       R + VK  GE   D GGV+ +  T M  +L S    L V  PNG  DT
Sbjct: 4465 PALLRRQIDSKGRLFSVKFRGEEGVDWGGVYREGATSMVDDLFSPYFSLFVLCPNGQHDT 4524

Query: 283  GYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFT 342
            G NR  Y+ NP  +  + ++  F F+G L G+++RT    P  L  LVWK ++ + +T  
Sbjct: 4525 GNNRGMYLPNPKCTSPV-AMQMFAFVGQLLGISLRTHGDFPFMLPSLVWKQLLGQTLTRA 4583

Query: 343  DLEDNDTLYAQSLRAIRDIHLSGV-TEANFPEIIP-LEC-FEGASWTGRITPIVTGGQSV 399
            DLED D ++ Q L  I +    G+ TE  F      LE  F  +S TG    +V GG+ +
Sbjct: 4584 DLEDTDAMFIQMLDGIANCENDGISTEDEFATAFAGLELRFTASSCTGEEIELVLGGRQL 4643

Query: 400  PLTFANRLQYYEAA 413
             + F NRL+Y   A
Sbjct: 4644 TVEFHNRLEYCRLA 4657


>gi|407849612|gb|EKG04304.1| ubiquitin-protein ligase, putative [Trypanosoma cruzi]
          Length = 3661

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 5/218 (2%)

Query: 198  VTVRRLTTKSKQT--VKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDD 255
            V++ RL  ++ +   +  +F Q    +        R   R W V  LGEG++D GG F +
Sbjct: 3260 VSINRLKARANKNSWMSSVFGQTFSLLADQHPRIFRTNKRFWGVVFLGEGSEDVGGPFRE 3319

Query: 256  TITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSES-LQSLMHFKFLGILFGV 314
             I EMC EL+S A+PL V T N V +TG  RD ++  P  S +    L  F F+G L G 
Sbjct: 3320 HIGEMCRELMSTALPLFVPTANNVHNTGTYRDAFV--PAASATGTAELAAFVFIGQLMGG 3377

Query: 315  AIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI 374
            A+R+ +PL L   P++WK +   P+  +D++D D +  Q +R  R +     +   F E+
Sbjct: 3378 AMRSNEPLSLFFPPIIWKFLCFYPIEESDVDDVDRICLQCIREFRGLRNRVGSGDMFDEV 3437

Query: 375  IPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEA 412
               E F      G +  ++ GG S  +T     +Y +A
Sbjct: 3438 FDAETFTTRLSDGSVKELIPGGSSTRVTLERCEEYADA 3475


>gi|440789761|gb|ELR11060.1| HECTdomain (ubiquitin-transferase) domain containing protein
            [Acanthamoeba castellanii str. Neff]
          Length = 3832

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 150/329 (45%), Gaps = 48/329 (14%)

Query: 116  QNKPLPLIRAR---LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSW-LVHP--SLRP 169
            QN  L  IR R   ++L NR      Q+  +LPL +  Q     T  SW L H    L  
Sbjct: 3368 QNLSLEDIRVRFTAVRLFNR------QLTVVLPLVDFSQ-----THLSWSLAHSVCKLTG 3416

Query: 170  LFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRR---LTTKSK---QTVKPIFAQISRQVV 223
            L  P        + +  TM   +   PSVT+ R   L  K K   +  + +F Q  RQ+ 
Sbjct: 3417 LIFPSTKVNLWNKILNSTM--SRANKPSVTINRPRALRAKEKGDPEGSRSVFGQAYRQLH 3474

Query: 224  KMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTG 283
             +K   LR+P + + V   GEG  DAGG+F D I+ MC +L S  VPL +  PN     G
Sbjct: 3475 FLKPEVLRVPGQTFSVTYEGEGGRDAGGLFRDCISHMCADLHSSWVPLFIPCPNAKG-FG 3533

Query: 284  YNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTD 343
             N+D++I NP LS +   L  + F+G L G+AIR K  L L L  +VWK +V   +T  D
Sbjct: 3534 ENQDKWIPNP-LSLTSLHLSMYAFVGKLMGIAIRGKHILNLDLPSIVWKQLVGAELTVRD 3592

Query: 344  LEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTG-------- 395
            LE  D      L  +R      +TE    E +  E  +  +W    TP   G        
Sbjct: 3593 LELIDKHCVNQLEEVR-----AMTEGTEEERVMFEALD-YTWA---TPAADGKTLLDLCP 3643

Query: 396  -GQSVPLTFANRLQY---YEAAIACGFKH 420
             G+ +P+ F +RL Y    EAA    F+ 
Sbjct: 3644 NGRDLPVRFEDRLDYARKVEAARLNEFRE 3672


>gi|401421006|ref|XP_003874992.1| putative ubiquitin-protein ligase [Leishmania mexicana
            MHOM/GT/2001/U1103]
 gi|322491228|emb|CBZ26494.1| putative ubiquitin-protein ligase [Leishmania mexicana
            MHOM/GT/2001/U1103]
          Length = 4166

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 122/270 (45%), Gaps = 22/270 (8%)

Query: 164  HPSLRPLFAPRVYTL-------PLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKP-IF 215
            HP+L  L    V TL        LV SV     V          R      +Q+VK  +F
Sbjct: 3712 HPTLMTLLFLSVRTLLFGAVRRKLVESVLTVSSVRSEQYRICINRTKAHAERQSVKSSVF 3771

Query: 216  AQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRT 275
             Q    +        +   R W    LGEGA+DAGG F + ++EMC EL+SG +P  V T
Sbjct: 3772 GQTFALLGSQSSRIFQTHQRFWNTVFLGEGAEDAGGPFREHLSEMCRELMSGRLPFFVPT 3831

Query: 276  PNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIV 335
             N V +TG +R+ Y+     + S   +  F F+G L G A+R++ PL L L PLVW+ + 
Sbjct: 3832 ANHVHNTGSHREAYVPAAS-ARSAYDIEAFAFIGKLMGGALRSEDPLDLFLPPLVWRYLC 3890

Query: 336  QEPVTFTDLEDNDTLYAQSLR------------AIRDIHLSGVTEAN-FPEIIPLECFEG 382
              P+T T++E  D +  Q +R            A+ D+  +G TE   F ++   E F  
Sbjct: 3891 AYPITETEVEQVDVICVQCIREFRVLSTTNAAVAVADVDEAGGTETELFEDVFGEEFFVT 3950

Query: 383  ASWTGRITPIVTGGQSVPLTFANRLQYYEA 412
                     ++ GG    +T A   +Y EA
Sbjct: 3951 QLSDHSTKELIEGGAQTRVTLARSSEYAEA 3980


>gi|261332934|emb|CBH15929.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972]
          Length = 3721

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 5/221 (2%)

Query: 198  VTVRRLTTKSKQT--VKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDD 255
            V++ R+  ++ +   +  +F Q    V            R W V  LGEGA+D GG F +
Sbjct: 3320 VSINRVNARANKASWMSSVFGQTFSLVADQNPRIFCTNRRFWSVVFLGEGAEDVGGPFRE 3379

Query: 256  TITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE-SLQSLMHFKFLGILFGV 314
             I+EMC EL+S  +PL V T N V +TG  RD ++  P  S  S   L  + F+G L G 
Sbjct: 3380 HISEMCRELMSTELPLFVPTANNVHNTGSYRDAFV--PAASALSDTELSAYVFVGQLMGG 3437

Query: 315  AIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI 374
            A+R  +PL L   PLVWK +   P+T +D++D D +  Q +R  R ++    +   + E+
Sbjct: 3438 ALRNNEPLGLFFPPLVWKFLCFYPITESDIDDIDRICLQCIREFRSLNDRLGSSDMYDEV 3497

Query: 375  IPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIA 415
               E F      G +  ++ GG  + +TF    +Y +A  A
Sbjct: 3498 FDSETFTTRLSDGTLKELIAGGSGMRVTFDRCGEYADALSA 3538


>gi|71748036|ref|XP_823073.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
            GUTat10.1]
 gi|70832741|gb|EAN78245.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
            927/4 GUTat10.1]
          Length = 3721

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 5/221 (2%)

Query: 198  VTVRRLTTKSKQT--VKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDD 255
            V++ R+  ++ +   +  +F Q    V            R W V  LGEGA+D GG F +
Sbjct: 3320 VSINRVNARANKASWMSSVFGQTFSLVADQNPRIFCTNRRFWSVVFLGEGAEDVGGPFRE 3379

Query: 256  TITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE-SLQSLMHFKFLGILFGV 314
             I+EMC EL+S  +PL V T N V +TG  RD ++  P  S  S   L  + F+G L G 
Sbjct: 3380 HISEMCRELMSTELPLFVPTANNVHNTGSYRDAFV--PAASALSDTELSAYVFVGQLMGG 3437

Query: 315  AIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI 374
            A+R  +PL L   PLVWK +   P+T +D++D D +  Q +R  R ++    +   + E+
Sbjct: 3438 ALRNNEPLGLFFPPLVWKFLCFYPITESDIDDIDRICLQCIREFRSLNDRLGSSDMYDEV 3497

Query: 375  IPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIA 415
               E F      G +  ++ GG  + +TF    +Y +A  A
Sbjct: 3498 FDSETFTTRLSDGTLKELIAGGSGMRVTFDRCGEYADALSA 3538


>gi|407410175|gb|EKF32713.1| ubiquitin-protein ligase, putative [Trypanosoma cruzi marinkellei]
          Length = 3716

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 5/218 (2%)

Query: 198  VTVRRLTTKSKQT--VKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDD 255
            V++ RL  ++ +   +  +F Q    + +      R   R W V  LGEG++D GG F +
Sbjct: 3315 VSINRLKARANKNSWMSSVFGQTFSLLAEQHPRIFRTNKRFWGVVFLGEGSEDVGGPFRE 3374

Query: 256  TITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE-SLQSLMHFKFLGILFGV 314
             + EMC EL+S A+PL V T N V +TG  RD ++  P  S      L  F F+G L G 
Sbjct: 3375 HVGEMCRELMSTALPLFVPTANNVHNTGTYRDAFV--PAASAIGTAELAAFVFIGQLMGG 3432

Query: 315  AIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI 374
            A+R+ +PL L   P++WK +   P+  +D++D D +  Q +R  R +     +   F E+
Sbjct: 3433 AMRSNEPLSLFFPPIIWKFLCFYPIEESDIDDVDRICLQCIREFRGLKNRVGSGDMFDEV 3492

Query: 375  IPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEA 412
               E F      G +  ++ GG S  +T     +Y +A
Sbjct: 3493 FDAETFTTRLSDGSVKELIPGGSSTRVTLERCEEYADA 3530


>gi|348670037|gb|EGZ09859.1| hypothetical protein PHYSODRAFT_361866 [Phytophthora sojae]
          Length = 5836

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 115/226 (50%), Gaps = 13/226 (5%)

Query: 200  VRRLTTKSKQTVKP-----IFAQISRQVVKMKGSDLRL----PSRAWKVKLLGEGADDAG 250
            ++ L ++  + V+P      FAQ  RQ+ ++  + LR       R + VK  GE   D G
Sbjct: 5455 MQALESRDDREVEPSVSECFFAQAFRQLNQVDPALLRRQIDSKGRLFSVKFRGEEGVDWG 5514

Query: 251  GVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGI 310
            GV+ +  T M  +L S    L V  PNG  DTG NR  Y+ NP  +  + ++  F F+G 
Sbjct: 5515 GVYREGATSMVDDLFSPHFSLFVLCPNGQHDTGNNRGMYLPNPKCTSPV-AMQMFAFVGQ 5573

Query: 311  LFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGV-TEA 369
            L G+++RT    P  L  LVWK ++ +P+T +DLE  D ++ Q L  I +    G+ TE 
Sbjct: 5574 LLGISLRTHGDFPFMLPSLVWKQLLGQPLTRSDLEGTDAMFIQMLDGIANCENDGISTEE 5633

Query: 370  NFPEIIP-LEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAA 413
             F      LE  F  +S TG    +V GG+ + + F NRL+Y   A
Sbjct: 5634 EFATAFAGLELRFTASSCTGEEIELVPGGRHLTVGFYNRLEYCRLA 5679


>gi|440789747|gb|ELR11046.1| HECTdomain (ubiquitin-transferase) domain containing protein
            [Acanthamoeba castellanii str. Neff]
          Length = 3315

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 112/242 (46%), Gaps = 21/242 (8%)

Query: 186  KTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLR---LPSRAWKVKLL 242
            K ++V + F PS        K ++    +F Q+   +  M  + LR      R W V   
Sbjct: 2917 KKVIVKRRFEPS--------KERRMEDTVFHQLFAALQHMDCAKLRSTDANERPWTVAFQ 2968

Query: 243  GEGADDAGGVFDDTITEMCGELLS--GAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQ 300
            GEGA DAGG F D + ++C EL S    +PL +  PN    +G N+D YI  P  +    
Sbjct: 2969 GEGAQDAGGPFRDALMDVCEELQSPNSLLPLFIPCPNAQTSSGSNQDGYIPRPSATHK-N 3027

Query: 301  SLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRD 360
             L  F++LG L  V      PLPL    +VWK IV E  T  DLE  D    Q+L  +R 
Sbjct: 3028 HLAMFEWLGRLIAVGYLAHCPLPLYFPSIVWKGIVGEQATIADLEGIDQYCGQTLDELRS 3087

Query: 361  IHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKH 420
                G++EA F +II  E F      G + P+    +  P+TFANR +Y +  +      
Sbjct: 3088 AR--GLSEATFEDII-FEKFTTVLSDGTLVPL----KEEPVTFANRDEYVQLVVQARLAE 3140

Query: 421  SA 422
             A
Sbjct: 3141 GA 3142


>gi|71663225|ref|XP_818608.1| ubiquitin-protein ligase [Trypanosoma cruzi strain CL Brener]
 gi|70883869|gb|EAN96757.1| ubiquitin-protein ligase, putative [Trypanosoma cruzi]
          Length = 3716

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 107/218 (49%), Gaps = 5/218 (2%)

Query: 198  VTVRRLTTKSKQT--VKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDD 255
            V++ RL  ++ +   +  +F Q    +        R   R W V  LGEG++D GG F +
Sbjct: 3315 VSINRLKARANKNSWMSSVFGQTFSLLADQHPRIFRTNKRFWGVVFLGEGSEDVGGPFRE 3374

Query: 256  TITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE-SLQSLMHFKFLGILFGV 314
             I EMC EL+S A+PL V T N V +TG  RD ++  P  S      L  F F+G L G 
Sbjct: 3375 HIGEMCRELMSTALPLFVPTANNVHNTGTYRDAFV--PAASAIGTAELAAFVFIGQLMGG 3432

Query: 315  AIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI 374
            A+R+ +PL L   P++WK +   P+  +D++D D +  Q +R  R +     +   F E+
Sbjct: 3433 AMRSNEPLSLFFPPIIWKFLCFYPIEESDVDDVDRICLQCIREFRGLRNRVGSGDMFDEV 3492

Query: 375  IPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEA 412
               E F      G +  ++ GG S  +T     +Y +A
Sbjct: 3493 FDAETFTTRLSDGSVKELIPGGSSKRVTLERCEEYADA 3530


>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 4048

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 109/198 (55%), Gaps = 3/198 (1%)

Query: 214  IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGEL--LSGAVPL 271
            +FAQ   Q+  ++ + LR   RA+K + +GE  DD GG++ + + ++  EL   +  +P+
Sbjct: 3706 VFAQTFEQLHGLQPALLRGADRAFKCQFVGEFGDDFGGLYRECLAQLSSELQTFTPLLPV 3765

Query: 272  LVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            L   PN +  TG NR+ Y+ N  L    + +   +FLG L GVA+RTK PL L L P VW
Sbjct: 3766 LRPCPNELMSTGENRELYVPNSHLRCHPRRVQMAEFLGKLAGVAVRTKTPLDLNLPPAVW 3825

Query: 332  KLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITP 391
            KL+V + VT  D+E       Q +  I D+   G+TE  F E++    F   S T     
Sbjct: 3826 KLLVGQQVTRHDIEAIHQGCFQVVDTIADLDSHGITEDMFDELVDAS-FTVLSSTRETVE 3884

Query: 392  IVTGGQSVPLTFANRLQY 409
            +V GG+++ +T+ +R +Y
Sbjct: 3885 LVPGGKNLHVTWGDREEY 3902



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 83/164 (50%), Gaps = 9/164 (5%)

Query: 350 LYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGA--SWTGRITPIVTGGQSVPLTFANRL 407
           + A  +RA+  I +S V  AN  E +     +GA  SW       +  G ++  +   R+
Sbjct: 539 IIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHTPRM 598

Query: 408 ------QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
                 +Y+    A  + HSAVV+SNG L TFG  D G+LG   T +   P+ V AL+  
Sbjct: 599 IDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQ 658

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            V   +CGL HTV     G+ VY+FG  +YG+LGLG+     TP
Sbjct: 659 VVTKAACGLYHTVAATSDGE-VYSFGKNDYGQLGLGHARNIKTP 701



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 4/95 (4%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV---VALNKVHVESVSCGLN 471
           ACG  H+   TS+G +Y+FG  DYG+LG G   N K P  V   +  +   + +VSCG  
Sbjct: 664 ACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYY 723

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HTV I++KGK +  +G  +YG+LG+G+   K + Q
Sbjct: 724 HTVTISEKGKLI-TWGRNDYGQLGIGSKEHKNSAQ 757



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A++CG+ H+  ++  G L T+G  DYG+LG G+  +    + V       +++ SCG  H
Sbjct: 717 AVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYH 776

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           ++ +   G+ V  FG    G+LG G
Sbjct: 777 SLILMSNGR-VMVFGRNNKGQLGAG 800



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVAL-NKVHVESVSCGL 470
           A A G +H   V S+G ++++G  D G+LG G+T++    P  + +L  K H+ + +   
Sbjct: 556 AAANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSY 615

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +H+  ++  G+ +  FG  + G+LGL +T  + TPQ
Sbjct: 616 HHSAVVSSNGE-LLTFGMNDCGQLGLDHTQHQHTPQ 650



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNK-NIRQV 72
           I +V  + G EH+LAV++ G VF+WG N   QLGLG+ I+    P+++ +L  K +I   
Sbjct: 552 ISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTA 611

Query: 73  SAGRSHSA 80
           +    HSA
Sbjct: 612 AVSYHHSA 619



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 39/72 (54%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           +  HI   +V   H   VS+ G++  +G N   QLGL +  +   PQ+V ALS++ + + 
Sbjct: 604 EKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKA 663

Query: 73  SAGRSHSAAWTA 84
           + G  H+ A T+
Sbjct: 664 ACGLYHTVAATS 675



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 4   TSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQ 59
           T  +H P    A  +  +   + G  H +A ++ G+V+++G N   QLGLG+  N + P 
Sbjct: 643 TQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNIKTPA 702

Query: 60  LV---LALSNKNIRQVSAGRSHS 79
           LV   L  S++ I  VS G  H+
Sbjct: 703 LVKTSLGESDEKIVAVSCGYYHT 725



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNKNIRQVSAG 75
           IV +S G  H + +S  G++  WG N   QLG+G++ +    Q V L +S+K I+  S G
Sbjct: 715 IVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSK-IKNASCG 773

Query: 76  RSHS 79
             HS
Sbjct: 774 CYHS 777



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 14/94 (14%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV------ALNKVHVESVS 467
           +A G +  AVV ++G ++T G    G+ G+GT       ERV+      AL+ + +  V+
Sbjct: 502 VAGGNEVLAVVMNDGGVFTCGLNKSGQCGNGT-----FEERVIIATPVRALSGIAISMVA 556

Query: 468 C--GLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
              G  H + +A  G AV+++G  + G+LGLG+T
Sbjct: 557 AANGCEHMLAVASDG-AVFSWGYNDRGQLGLGST 589


>gi|340058508|emb|CCC52866.1| putative ubiquitin-transferase [Trypanosoma vivax Y486]
          Length = 4428

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 150/331 (45%), Gaps = 37/331 (11%)

Query: 162  LVHPSLRPLFAPRVYTLPLV--RSV----GKTMLVGKNFGPSVTVRRLTTKSKQTVKPI- 214
            L  P  R L+  R Y LP V  RS+      T   G+N   ++  R+  +  K    P+ 
Sbjct: 3942 LAGPVSRSLYQCRQYILPTVALRSLHCFFSHTNCTGENLKLTLNRRKALSLMKDVNAPLS 4001

Query: 215  -------FAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSG 267
                   F QI + +     S      + W V  +GEGADD GG + ++I+++C EL+  
Sbjct: 4002 DRVRGSLFGQIYQLLHDKNVSLFCTSKKLWSVSFVGEGADDIGGPYRESISQLCSELMGP 4061

Query: 268  AVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLS 327
            ++PL + + N + D G +R+ +++NP+L   ++ L  + F G L G  +R+ +PLP+ L 
Sbjct: 4062 SLPLFIPSANQITDIGDSREAFVVNPELQPPVR-LGMYHFFGRLIGGCLRSAEPLPVYLP 4120

Query: 328  PLVWKLIVQEPVTFTDLEDNDTLYAQSLRAI------RDIHLSGVTEANFPEIIPLECFE 381
             ++WK ++  PV   DL   D    QS R I       D   +  T+ +  E+ P   F 
Sbjct: 4121 SILWKALLGAPVDAGDLARIDKSTLQSYRCIYQLARSNDDEAAPATDEDIAELCP-GGFT 4179

Query: 382  GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
                 GR   +  GG+++ +   N   + E A+            +  L++ G      +
Sbjct: 4180 AVDDAGRERELFPGGKAIAVNARNVHLFLELAL------------HYRLHSMGAAQIKAI 4227

Query: 442  GHGTTMNWKVPERVVALNK-VHVESVSCGLN 471
              G   +  VP   V+L K   +E + CGL+
Sbjct: 4228 ADG--FHQVVPLTAVSLLKWYELERLVCGLS 4256


>gi|325191553|emb|CCA25867.1| HECT E3 ubiquitin ligase putative [Albugo laibachii Nc14]
          Length = 5038

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 146/328 (44%), Gaps = 34/328 (10%)

Query: 112  YGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPY--------SWLV 163
            Y    N  L  +R  L    R  D+    +R   + +++Q   +  PY        SW +
Sbjct: 4554 YQFRLNPQLDALRCSLLFDTRLEDV---HIRFALIKHLNQCLHEALPYIDLREIGSSWSL 4610

Query: 164  HPSLRPLFAPRVYTLP---LVRSVGKTMLVGKN--FGPSVTVRRL---TTKSKQTVKP-- 213
               LR L     + +    +  ++  T   G++      +T+ RL    ++  + V+P  
Sbjct: 4611 ASRLRQLSHCIFFDVKNKIVEAAIEATEFTGESSMTNARITLDRLQALESRDDREVEPSI 4670

Query: 214  ---IFAQISRQVVKMKGSDLRLP----SRAWKVKLLGEGADDAGGVFDDTITEMCGELLS 266
                FAQ  RQ+  +  +  R       R + VK LGE   D GGV+ +    M  +L S
Sbjct: 4671 SGCFFAQAFRQLHDVNPAVFRRKIDSKGRLFNVKFLGEEGVDWGGVYREGTNSMVDDLFS 4730

Query: 267  GAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326
                L V  PNG  DTG NR  Y+ N    +S  ++  F+F+G L G+++RT+   P   
Sbjct: 4731 AHFNLFVLCPNGQHDTGANRSMYLPNSK-CDSPVAMQMFEFVGKLMGISLRTRGDFPFAF 4789

Query: 327  SPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVT-EANFPEIIPLECFE---- 381
              LVWK ++ + +   DLED D ++ Q L  IR+  L G++ +  F      +  +    
Sbjct: 4790 PSLVWKQLIGQRLDRIDLEDTDAMFVQMLDGIRNCELDGISHQEEFERAFHDQGLDLRYT 4849

Query: 382  GASWTGRITPIVTGGQSVPLTFANRLQY 409
                TG+   +V  G+ + +TFANR +Y
Sbjct: 4850 AFDCTGKEVELVANGRKILVTFANRQEY 4877


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 109/198 (55%), Gaps = 3/198 (1%)

Query: 214  IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGEL--LSGAVPL 271
            +FAQ   Q+  ++ + LR   RA+K + +GE  DD GG++ + + ++  EL   +  +P+
Sbjct: 3764 VFAQTFEQLHGLQPTLLRGADRAFKCQFVGEFGDDFGGLYRECLAQLSSELQTFTPLLPV 3823

Query: 272  LVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            L   PN +  TG NR+ ++ N  L  + + +   +FLG L G+A+RTK PL L L P+VW
Sbjct: 3824 LRPCPNALMSTGENRELFVPNSHLRSNPRRVQMAEFLGKLAGIAVRTKTPLDLNLPPVVW 3883

Query: 332  KLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITP 391
            KL+V + V   D+E       Q +  I ++   G+TEA F EI+    F   S T     
Sbjct: 3884 KLLVGQQVARHDIEVIHQGCFQVVDTIANLAAHGITEAMFDEIVDAS-FTVLSSTRETVE 3942

Query: 392  IVTGGQSVPLTFANRLQY 409
            +V GG  + +T+ +R +Y
Sbjct: 3943 LVPGGTHLHVTWDDREEY 3960



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV---VALNKVHVESVSCGL 470
           +ACG  H+  +TS G +Y+FG  DYG+LG G   N KVP  V   +  +   + +VSCG 
Sbjct: 668 VACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGY 727

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HTV I++KGK +  +G  +YG+LG+G+   K + Q
Sbjct: 728 YHTVTISEKGKLI-TWGRNDYGQLGIGSKDHKNSAQ 762



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 1/93 (1%)

Query: 406 RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
           R +Y+    A  + HSAVV+SNG L  FG  D G+LG   T +   P+ V +L+   +  
Sbjct: 608 REKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITE 667

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           V+CGL HT+ I   G+ VY+FG  +YG+LGLG+
Sbjct: 668 VACGLYHTIAITSGGE-VYSFGKNDYGQLGLGH 699



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 1/89 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A++CG+ H+  ++  G L T+G  DYG+LG G+  +    + V       +++ SCG  H
Sbjct: 722 AVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYH 781

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGL 501
           T+ +   G+ V  FG    G+LG G+  L
Sbjct: 782 TLILMSNGR-VMVFGRNNKGQLGAGSRTL 809



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 25/167 (14%)

Query: 354 SLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYE-- 411
           S +AIRDI       A   E++ +   +GA +T  +      GQ    TF  R+      
Sbjct: 500 SAKAIRDI-------AGGNEVLAVVMKDGAVFTCGLN---KSGQCGNGTFEERVIIATPV 549

Query: 412 ----------AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVAL-N 459
                      A A G +H   V S+G +Y++G  D G+LG G+T++    P  + +L  
Sbjct: 550 RALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLRE 609

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           K H+ + +   +H+  ++  G+ +  FG  + G+LGL +T  + TPQ
Sbjct: 610 KYHITTAAVSYHHSAVVSSNGE-LLMFGMNDCGQLGLDHTQHQHTPQ 655



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV---LALSNKNIRQVS 73
           I +++ G  H +A+++ G+V+++G N   QLGLG+  N + P LV   L  S++ I  VS
Sbjct: 665 ITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVS 724

Query: 74  AGRSHS 79
            G  H+
Sbjct: 725 CGYYHT 730



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 2/68 (2%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNK-NIRQV 72
           I++V  + G EH+LAV++ G V++WG N   QLGLG+ I+    P+++ +L  K +I   
Sbjct: 557 INMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTA 616

Query: 73  SAGRSHSA 80
           +    HSA
Sbjct: 617 AVSYHHSA 624



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           +  HI   +V   H   VS+ G++  +G N   QLGL +  +   PQLV +LS++ I +V
Sbjct: 609 EKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEV 668

Query: 73  SAGRSHSAAWTA 84
           + G  H+ A T+
Sbjct: 669 ACGLYHTIAITS 680



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNKNIRQVSAG 75
           IV +S G  H + +S  G++  WG N   QLG+G++ +    Q V L LS+K I+  S G
Sbjct: 720 IVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSK-IKTASCG 778

Query: 76  RSHS 79
             H+
Sbjct: 779 CYHT 782


>gi|398025220|ref|XP_003865771.1| ubiquitin-protein ligase, putative [Leishmania donovani]
 gi|322504008|emb|CBZ39095.1| ubiquitin-protein ligase, putative [Leishmania donovani]
          Length = 4164

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 105/219 (47%), Gaps = 15/219 (6%)

Query: 208  KQTVKP-IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLS 266
            +Q+VK  +F Q    +        +   R W    LGEGA+DAGG F + ++EMC EL+S
Sbjct: 3761 RQSVKSSVFGQTFALLGSQSSRIFQTHQRFWSTVFLGEGAEDAGGPFREHLSEMCRELMS 3820

Query: 267  GAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326
            G +P  V T N V +TG +R+ Y+     + S   L  F F+G L G A+R++ PL L L
Sbjct: 3821 GRLPFFVPTANHVHNTGSHREAYVPAAS-ARSAYDLEAFAFIGKLMGGALRSEDPLDLFL 3879

Query: 327  SPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHL------------SGVTEAN-FPE 373
             PLVW+ +   P+T  ++E  D +  Q +R  R +              SG TE   F +
Sbjct: 3880 PPLVWRYLCAYPITEAEVEQVDVICVQCVREFRVLSATHAAAAVADADESGGTETELFED 3939

Query: 374  IIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEA 412
            +   E F           ++ GG    +T A   +Y EA
Sbjct: 3940 VFGEEFFVTQLSDHSTKELIEGGAQTRVTLARSSEYAEA 3978


>gi|339899405|ref|XP_001469357.2| putative ubiquitin-protein ligase [Leishmania infantum JPCM5]
 gi|321398812|emb|CAM72464.2| putative ubiquitin-protein ligase [Leishmania infantum JPCM5]
          Length = 4164

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 105/219 (47%), Gaps = 15/219 (6%)

Query: 208  KQTVKP-IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLS 266
            +Q+VK  +F Q    +        +   R W    LGEGA+DAGG F + ++EMC EL+S
Sbjct: 3761 RQSVKSSVFGQTFALLGSQSSRIFQTHQRFWSTVFLGEGAEDAGGPFREHLSEMCRELMS 3820

Query: 267  GAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326
            G +P  V T N V +TG +R+ Y+     + S   L  F F+G L G A+R++ PL L L
Sbjct: 3821 GRLPFFVPTANHVHNTGSHREAYVPAAS-ARSAYDLEAFAFIGKLMGGALRSEDPLDLFL 3879

Query: 327  SPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHL------------SGVTEAN-FPE 373
             PLVW+ +   P+T  ++E  D +  Q +R  R +              SG TE   F +
Sbjct: 3880 PPLVWRYLCAYPITEAEVEQVDVICVQCVREFRVLSATHAAAAVADADESGGTETELFED 3939

Query: 374  IIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEA 412
            +   E F           ++ GG    +T A   +Y EA
Sbjct: 3940 VFGEEFFVTQLSDHSTKELIEGGAQTRVTLARSSEYAEA 3978


>gi|157877849|ref|XP_001687222.1| putative ubiquitin-protein ligase [Leishmania major strain Friedlin]
 gi|68130297|emb|CAJ09609.1| putative ubiquitin-protein ligase [Leishmania major strain Friedlin]
          Length = 4165

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 105/219 (47%), Gaps = 15/219 (6%)

Query: 208  KQTVKP-IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLS 266
            +Q+VK  +F Q    +        +   R W    LGEGA+DAGG F + ++EMC EL+S
Sbjct: 3762 RQSVKSSVFGQTFALLGSQSSRIFQTHQRFWNTVFLGEGAEDAGGPFREHLSEMCRELMS 3821

Query: 267  GAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326
            G +P  V T N V +TG +RD Y+     + S   L  F F+G L G A+R++ PL L L
Sbjct: 3822 GRLPFFVPTANHVHNTGSHRDAYVPAAS-ARSAYDLEAFAFIGKLMGGALRSEDPLDLFL 3880

Query: 327  SPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIH------------LSGVTEAN-FPE 373
             PLVW+ +   P+T  ++E  D +  Q +R  R +              +G TE   F +
Sbjct: 3881 PPLVWRYLCAYPITEAEVEQVDVICVQCVREFRVLSATHAAAAVADADEAGGTETELFED 3940

Query: 374  IIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEA 412
            +   E F           ++ GG    +T A   +Y EA
Sbjct: 3941 VFGEEFFVTQLSDHSTKELIEGGAQTRVTLARSSEYAEA 3979


>gi|300123097|emb|CBK24104.2| unnamed protein product [Blastocystis hominis]
          Length = 1832

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 150/330 (45%), Gaps = 28/330 (8%)

Query: 107  DIPDHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPS 166
            D   HYG L +     IR RL  L  F+  + ++V L+ LG   +  +       ++   
Sbjct: 1354 DKARHYG-LNSFSRLDIRLRLFFLQYFNAQLQRIVHLVDLGLPRESGI--ITLGRILAGL 1410

Query: 167  LRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTV--RRLTTKSKQTVKP----------- 213
               +FAP V    L  ++ +T+  GK+  P V +  RR+ T  ++   P           
Sbjct: 1411 TGYIFAP-VKEHVLALTISQTVYHGKDCYPVVELDNRRVFTAMERDALPSRGSDTETQHA 1469

Query: 214  -----IFAQISRQVVKMKGSDLRLP----SRAWKVKLLGEGADDAGGVFDDTITEMCGEL 264
                  FAQ+ R+   +    LR P     R   VKL GE   D GG++ DTI     +L
Sbjct: 1470 LSSQCTFAQLFRETRDIPVEVLRAPLDGRERLLAVKLKGEQGLDWGGIYRDTIERCIDDL 1529

Query: 265  LSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPL 324
             S  + L +  PN          +Y+ NP   ES  +L  + F+G L G+A+RTK+ +  
Sbjct: 1530 FSDRIDLFLACPNAREPNSPGEMKYLPNPKYRESSDALAMYSFVGNLIGIALRTKQRMAF 1589

Query: 325  PLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGAS 384
             L   VWK IV + VT  D++  D  +  +LR + +   +  +E +F E+  L  F    
Sbjct: 1590 ELCSAVWKTIVGDVVTIDDVDSVDHAFVSTLRQVNEFTQTDDSE-DFQELFVLT-FSVLD 1647

Query: 385  WTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
              G    ++  G  VP+T++NR ++Y+ A+
Sbjct: 1648 SAGNEVELMPSGSQVPVTYSNRSKFYQLAL 1677


>gi|389603469|ref|XP_001569276.2| putative ubiquitin-protein ligase [Leishmania braziliensis
            MHOM/BR/75/M2904]
 gi|322505864|emb|CAM44417.2| putative ubiquitin-protein ligase [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 4169

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 105/219 (47%), Gaps = 15/219 (6%)

Query: 208  KQTVKP-IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLS 266
            +Q++K  +F Q    +        +   R W    LGEGA+DAGG F + ++EMC EL+S
Sbjct: 3765 RQSIKSSVFGQTFALLGSHSSRVFQTHQRFWSTVFLGEGAEDAGGPFREHLSEMCRELMS 3824

Query: 267  GAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326
            G +P  V T N V +TG +R+ Y+       S   L  F F+G L G A+R++ PL L L
Sbjct: 3825 GRLPFFVPTANHVHNTGSHREAYVPAASACSSYD-LEAFVFIGKLVGGALRSEDPLDLFL 3883

Query: 327  SPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHL------------SGVTEAN-FPE 373
             PLVW+ +   P+T T++E  D +  Q +R  R +              +G TE   F +
Sbjct: 3884 PPLVWRYLCAYPITETEVEQVDAICVQCIREFRTLSAASTPVAPTDGVEAGGTETELFED 3943

Query: 374  IIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEA 412
            +   E F           ++ GG    +T A   +Y EA
Sbjct: 3944 VFGDEFFVTQLSDHSTKELIEGGAQTRVTLARSNEYAEA 3982


>gi|71657616|ref|XP_817321.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70882504|gb|EAN95470.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 4423

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 115/231 (49%), Gaps = 21/231 (9%)

Query: 165  PSLRPLFAPRVYTLPLVR------SVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPI---- 214
            P  R L+  R Y LP+V           T  +G+N   ++  R+  +       P+    
Sbjct: 3942 PICRSLWQCREYLLPVVVLRILHGFFSHTNCLGENVKLTLNRRKALSLVNDADAPVSERL 4001

Query: 215  ----FAQISRQVVKMKGSDLRLPSRA-WKVKLLGEGADDAGGVFDDTITEMCGELLSGAV 269
                F Q+  Q++  K   L   +R  W V  +GEGADD GG + ++IT++C EL+   +
Sbjct: 4002 RGSLFGQV-YQLLHDKNVSLFCTNRKLWSVNFIGEGADDIGGPYRESITQLCSELMGPGL 4060

Query: 270  PLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPL 329
            PL + +PN   D G +R+ +++ P +   ++ +M + F G L    +R+ +PLP+ LS  
Sbjct: 4061 PLFIPSPNQANDIGDSRELFVVRPVMEPPVRIIM-YHFFGRLIAGCLRSSEPLPIYLSSR 4119

Query: 330  VWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS----GVTEANFPEIIP 376
            +WK +V  PV  +DL   D   AQS + IR + LS    G T+    E+ P
Sbjct: 4120 IWKALVGAPVDESDLCVVDKTTAQSYQCIRQLLLSKRGEGTTDEEITELCP 4170


>gi|221488181|gb|EEE26395.1| HECT type ubiquitin ligase, putative [Toxoplasma gondii GT1]
          Length = 1908

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 101/208 (48%), Gaps = 3/208 (1%)

Query: 214  IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLV 273
            +F Q+ RQ+  +    LR   RAW V   GEG  DAGG++ D++  +  EL S   PL +
Sbjct: 1442 VFGQLYRQLSDVSPKRLRSHGRAWYVVYDGEGGIDAGGIYRDSLAHIAQELQSPFSPLFM 1501

Query: 274  RTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKL 333
               N     G N+DR++ +P    S   L  F+FLG L GVA+R +  L L LS  +WK 
Sbjct: 1502 PCSNSRG-FGDNQDRWVPSPQCV-SPSHLSMFRFLGRLMGVAVRGRLCLDLNLSRALWKP 1559

Query: 334  IVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIV 393
            +V   V   DLE  D L  Q L+ +  +H S      F E  PL      S  GR+  + 
Sbjct: 1560 VVGLSVGAQDLEAVDALCVQMLQTVCQLHSSQGAPERFTEEFPLFWHTTLS-DGRVEELR 1618

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHS 421
             GG+ +P+ +  R  Y    +AC    S
Sbjct: 1619 VGGKDLPVRWEERADYARRTVACRLDES 1646


>gi|237832853|ref|XP_002365724.1| HECT type ubiquitin ligase, putative [Toxoplasma gondii ME49]
 gi|211963388|gb|EEA98583.1| HECT type ubiquitin ligase, putative [Toxoplasma gondii ME49]
          Length = 1905

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 102/208 (49%), Gaps = 3/208 (1%)

Query: 214  IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLV 273
            +F Q+ RQ+  +    LR   RAW V   GEG  DAGG++ D++  +  EL S   PL +
Sbjct: 1439 VFGQLYRQLSDVSPKRLRSHGRAWYVLYDGEGGIDAGGIYRDSLAHIAQELQSPFSPLFM 1498

Query: 274  RTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKL 333
               N     G N+DR++ +P    S   L  F+FLG L GVA+R +  L L LS  +WK 
Sbjct: 1499 PCSNSRG-FGDNQDRWVPSPRCV-SPSHLSMFRFLGRLMGVAVRGRLCLDLNLSGALWKP 1556

Query: 334  IVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIV 393
            +V   V   DLE  D L  Q L+ +  +H S      F E  PL      S  GR+  + 
Sbjct: 1557 VVGLSVGAQDLEAVDALCVQMLQTVCQLHSSQGAPERFTEEFPLFWHTTLS-DGRVEELR 1615

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHS 421
             GG+ +P+ +  R  Y    +AC  + S
Sbjct: 1616 VGGKDLPVRWEERADYARRTVACRLEES 1643


>gi|221508694|gb|EEE34263.1| hypothetical protein TGVEG_017860 [Toxoplasma gondii VEG]
          Length = 1905

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 101/208 (48%), Gaps = 3/208 (1%)

Query: 214  IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLV 273
            +F Q+ RQ+  +    LR   RAW V   GEG  DAGG++ D++  +  EL S   PL +
Sbjct: 1439 VFGQLYRQLSDVSPKRLRSHGRAWYVVYDGEGGIDAGGIYRDSLAHIAQELQSPFSPLFM 1498

Query: 274  RTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKL 333
               N     G N+DR++ +P    S   L  F+FLG L GVA+R +  L L LS  +WK 
Sbjct: 1499 PCSNSRG-FGDNQDRWVPSPRCV-SPSHLSMFRFLGRLMGVAVRGRLCLDLNLSGALWKP 1556

Query: 334  IVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIV 393
            +V   V   DLE  D L  Q L+ +  +H S      F E  PL      S  GR+  + 
Sbjct: 1557 VVGLSVGAQDLEAVDALCVQMLQTVCQLHSSQGAPERFTEEFPLFWHTTLS-DGRVEELR 1615

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHS 421
             GG+ +P+ +  R  Y    +AC    S
Sbjct: 1616 VGGKDLPVRWEERADYARRTVACRLDES 1643


>gi|328865739|gb|EGG14125.1| putative ubiquitin-protein ligase [Dictyostelium fasciculatum]
          Length = 4281

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 5/198 (2%)

Query: 214  IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLV 273
            +F Q  +Q+  ++ S LR   RAW+VKL  EGA DAGG + +T+T++  EL S  + L +
Sbjct: 3897 LFIQTFKQIYYLEPSKLRFNDRAWEVKLEREGARDAGGPYRETMTQIVSELSSLEMNLFL 3956

Query: 274  RTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKL 333
               N   D  +NRD+ + N   + S  SL  ++F+G L G+AIRT+  + L    L WK 
Sbjct: 3957 PCQNAQGDVAFNRDKLVPNSSQTSS-HSLALYEFIGRLIGIAIRTRNCIELSFPSLFWKS 4015

Query: 334  IVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS--GVTEANFPEIIPLECFEGASWTGRITP 391
            +V   +   DLE  D      L  I     S   + +  F ++   + F   S    +  
Sbjct: 4016 LVSAKIDRQDLEAIDKYTVNILEMINHNGSSRNSIDQEAFGDL--FQSFTAKSIDNTVVE 4073

Query: 392  IVTGGQSVPLTFANRLQY 409
            ++  G+++P+T+ NR +Y
Sbjct: 4074 LLHEGRNIPVTWHNRFEY 4091


>gi|403331689|gb|EJY64807.1| HECT E3 ubiquitin ligase, putative [Oxytricha trifallax]
          Length = 4454

 Score =  106 bits (265), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 67/197 (34%), Positives = 106/197 (53%), Gaps = 5/197 (2%)

Query: 218  ISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPN 277
            +SR  + M+ +  +   +AW VK +GE A D GG+F +++TE+C EL S  + LL+ T N
Sbjct: 4060 VSRNYLGMRIN--QADKKAWFVKFIGEFALDQGGLFRESLTELCQELQSHVLNLLIPTQN 4117

Query: 278  GVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQE 337
               + G NRD++ +NP  +   Q L  ++FLG L G+++R+   + L L   VWK +  E
Sbjct: 4118 QKNNHGENRDKWTINPAATSPSQ-LQMYEFLGALIGMSVRSGILMSLSLPSFVWKQLTNE 4176

Query: 338  PVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQ 397
             VT  D+   DT+  Q L  ++ I  S ++E  F E   L  F      G    +V GG+
Sbjct: 4177 EVTLNDIAAIDTMTVQILENLKTIQ-SQMSEETFLEGYDL-FFTTILSNGEEVELVHGGR 4234

Query: 398  SVPLTFANRLQYYEAAI 414
            S+ + F+N  +Y    I
Sbjct: 4235 SIRVNFSNLKEYIHKTI 4251


>gi|407851645|gb|EKG05450.1| ubiquitin-protein ligase, putative [Trypanosoma cruzi]
          Length = 4424

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 115/231 (49%), Gaps = 21/231 (9%)

Query: 165  PSLRPLFAPRVYTLPLVR------SVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPI---- 214
            P  R L+  R Y LP+V           T  +G+N   ++  R+  +       P+    
Sbjct: 3943 PICRSLWQFREYLLPVVVLRILHGFFSHTNCLGENVKLTLNRRKALSLVNDADAPVSERL 4002

Query: 215  ----FAQISRQVVKMKGSDLRLPSRA-WKVKLLGEGADDAGGVFDDTITEMCGELLSGAV 269
                F Q+  Q++  K   L   +R  W V  +GEGADD GG + ++IT++C EL+   +
Sbjct: 4003 RGSLFGQV-YQLLHDKNVSLFCTNRKLWSVNFIGEGADDIGGPYRESITQLCSELMGPGL 4061

Query: 270  PLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPL 329
            PL + +PN   D G +R+ +++ P +   ++ +M + F G L    +R+ +PLP+ LS  
Sbjct: 4062 PLFIPSPNQANDIGDSRELFVVRPVMEPPVRIIM-YHFFGRLIAGCLRSSEPLPIYLSSR 4120

Query: 330  VWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS----GVTEANFPEIIP 376
            +WK +V  PV  +DL   D   AQS + IR + LS    G T+    E+ P
Sbjct: 4121 IWKALVGAPVDESDLCVVDKTTAQSYQFIRQLLLSKRGEGTTDEEITELCP 4171


>gi|407404523|gb|EKF29939.1| ubiquitin-protein ligase, putative [Trypanosoma cruzi marinkellei]
          Length = 4428

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 21/231 (9%)

Query: 165  PSLRPLFAPRVYTLPLVR------SVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPI---- 214
            P  R L+  R Y LP+V           T  +G+N   ++  R+  +       P+    
Sbjct: 3947 PICRSLWQCREYLLPVVVLRILHGFFSHTNCLGENVKLTLNRRKALSIVNDADAPVSERL 4006

Query: 215  ----FAQISRQVVKMKGSDLRLPSRA-WKVKLLGEGADDAGGVFDDTITEMCGELLSGAV 269
                F Q+  Q++  K   L   +R  W V  +GEGADD GG + +++T++C EL+   +
Sbjct: 4007 RGSLFGQV-YQLLHDKNVSLFCTNRKLWSVNFIGEGADDIGGPYRESLTQLCSELMGPGL 4065

Query: 270  PLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPL 329
            PL + +PN   D G +R+ +++ P +   ++ +M + F G +    +R+ +PLP+ LS  
Sbjct: 4066 PLFIPSPNQANDIGDSRELFVVRPVMEPPVRLIM-YHFFGRMIAGCLRSSEPLPIYLSSR 4124

Query: 330  VWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS----GVTEANFPEIIP 376
            +WK +V  PV  +DL   D   AQS + IR + LS    G T+    E+ P
Sbjct: 4125 IWKALVGAPVDESDLCVVDKTTAQSYQFIRQLLLSKRGEGTTDEEITELCP 4175


>gi|261334271|emb|CBH17265.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972]
          Length = 4461

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 24/270 (8%)

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVR---- 182
            ++LL    +L      ++P   V    ++C     L  P  R L     Y LP V     
Sbjct: 3946 MQLLVTLQNLTSLAEAVIPYAGVPSIPMECDVL--LSGPIRRALDHLHDYMLPAVGLRFL 4003

Query: 183  --SVGKTMLVGKNFGPSVTVRRLTTKSKQTVK--------PIFAQISRQVVKMKGSDLRL 232
                 +T   G+N   ++  R+  +  K T           IF Q+  Q++  K   L  
Sbjct: 4004 HGFFSQTSSAGENLKLTLNRRKALSLVKDTTATLPERLSGSIFGQV-YQLLHDKNVSLFC 4062

Query: 233  PSRA-WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYIL 291
             SR  W V  +GEGADD GG + ++IT++C EL+  ++PL + +PN  ++ G +R+ +++
Sbjct: 4063 TSRKLWSVNFVGEGADDIGGPYRESITQLCSELMGPSLPLFIPSPNQASEIGESREVFVV 4122

Query: 292  NPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLY 351
             P++ E+   L  + F G   G  +R+ +P+P+ LS  VWK I+  PV  +DL   D   
Sbjct: 4123 RPEM-EAPVRLNMYHFFGRFLGGCLRSSEPVPIYLSSRVWKTILGAPVGVSDLGRVDVAT 4181

Query: 352  AQSLRAIRDIHL-----SGVTEANFPEIIP 376
             QS R I+ +       +G T+    E+ P
Sbjct: 4182 VQSYRYIQQLSSLGGGEAGATDGEVEELCP 4211


>gi|403343305|gb|EJY70978.1| HECT E3 ubiquitin ligase, putative [Oxytricha trifallax]
          Length = 4143

 Score =  103 bits (256), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 5/161 (3%)

Query: 214  IFAQISRQVVKMKGSDLR---LPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVP 270
            IF QI +Q+   K ++ +   + S+ + V   GEG+ DAGG F D IT MC EL S  +P
Sbjct: 3777 IFGQIYQQMKGDKFTNFKKNSVDSKVFSVTFAGEGSQDAGGPFRDCITNMCKELQSDCLP 3836

Query: 271  LLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLV 330
            LL+RT N   + G  R+ +I NP  S+S      F+FLG + G AIR+   L L ++PL 
Sbjct: 3837 LLIRTANNKNNHGQFRECWIPNPS-SKSPSHYKLFEFLGAMIGWAIRSTSALELDIAPLF 3895

Query: 331  WKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANF 371
            WK I+  P    DL+  DT   Q +  +R+ H   +T+ +F
Sbjct: 3896 WKKIIDVPCNEYDLKLFDTFSWQVIEDLRN-HKKSLTKEDF 3935


>gi|300175864|emb|CBK21860.2| unnamed protein product [Blastocystis hominis]
          Length = 2301

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 140/321 (43%), Gaps = 40/321 (12%)

Query: 123  IRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVR 182
            IR RL  +  F+  + +VV L+ LG         +P+   ++   + L     Y  P V+
Sbjct: 1838 IRMRLAFIQFFNAQLQRVVHLIELG---------SPWEDGINTLGKLLGGLTGYIFPAVK 1888

Query: 183  ------SVGKTMLVGKNFGPSVTV--RRLTTKSKQ-----------------TVKPIFAQ 217
                  S+ +T   GK+  P V +  RR  T+ ++                 T +  FAQ
Sbjct: 1889 ENALEVSILQTTYHGKDCYPVVELDNRRAFTELERSEMAGDAEFDEEARNAITSQCTFAQ 1948

Query: 218  ISRQVVKMKGSDLRLP----SRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLV 273
            + RQ  K K   LR       R   VK  GE   D GG++ D +     +L S  + L +
Sbjct: 1949 LFRQTRKFKVDVLRAKLDSRERLLAVKYKGEQGLDWGGIYRDMMERCIEDLFSDRIDLFI 2008

Query: 274  RTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKL 333
             +PN   +       ++ NP   ES  +L  + F+G L G++IRTK+ +   L   +WK 
Sbjct: 2009 PSPNAQNEEKNEDVTFVPNPKYRESSDALAMYSFVGNLIGISIRTKQLMSFELCSAIWKT 2068

Query: 334  IVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIV 393
            IV + VT  D+E  D  +  +L  +RD   SG  E +F  +  L  F      G    ++
Sbjct: 2069 IVGDAVTSEDVESVDRTFINTLNQVRDFEESGDPE-DFQYLFGL-TFSVLDSAGNEVELI 2126

Query: 394  TGGQSVPLTFANRLQYYEAAI 414
              G  V ++F NR +Y + A+
Sbjct: 2127 PSGTQVSVSFENREKYVQLAL 2147


>gi|71755013|ref|XP_828421.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
            GUTat10.1]
 gi|70833807|gb|EAN79309.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
            927/4 GUTat10.1]
          Length = 4460

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 24/270 (8%)

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVR---- 182
            ++LL    +L      ++P   V    ++C     L  P  R L     Y LP V     
Sbjct: 3945 MQLLVTLQNLTSLAEAVIPYAGVPSIPMECDVL--LSGPIRRALDHLHDYMLPAVGLRFL 4002

Query: 183  --SVGKTMLVGKNFGPSVTVRRLTTKSKQTVK--------PIFAQISRQVVKMKGSDLRL 232
                 +T   G+N   ++  R+  +  K T           IF Q+  Q++  K   L  
Sbjct: 4003 HGFFSQTSSSGENLKLTLNRRKALSLVKDTTATLPERLSGSIFGQV-YQLLHDKNVSLFC 4061

Query: 233  PSRA-WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYIL 291
             SR  W V  +GEGADD GG + ++IT++C EL+  ++PL + +PN  ++ G +R+ +++
Sbjct: 4062 TSRKLWSVNFVGEGADDIGGPYRESITQLCSELMGPSLPLFIPSPNQASEIGESREVFVV 4121

Query: 292  NPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLY 351
             P++ E+   L  + F G   G  +R+ +P+P+ LS  VWK I+  PV  +DL   D   
Sbjct: 4122 RPEM-EAPVRLNMYHFFGRFLGGCLRSSEPVPIYLSSRVWKTILGAPVGVSDLGRVDVAT 4180

Query: 352  AQSLRAIRDIHL-----SGVTEANFPEIIP 376
             QS R I+ +       +G T+    E+ P
Sbjct: 4181 VQSYRYIQQLSSLGGGEAGATDGEVEELCP 4210


>gi|403364667|gb|EJY82102.1| HECT E3 ubiquitin ligase, putative [Oxytricha trifallax]
          Length = 4132

 Score =  102 bits (253), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 12/216 (5%)

Query: 209  QTVKPIFAQISRQVVKMKGSDL-----RLPSRAWKVKLLGEGADDAGGVFDDTITEMCGE 263
            + V  IF QI + + K   +        + S+  KV+  GEG+ DAGG + +T+T +C E
Sbjct: 3756 EGVHSIFGQIMQSIKKSAKAKEAFRVNSVDSQILKVEFKGEGSIDAGGPYRETLTNICNE 3815

Query: 264  LLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLP 323
            L S  +PLL+ TPN   + G  R+ +++NP  S S   +  FK  G   G AIR+++ LP
Sbjct: 3816 LQSAVLPLLIPTPNNKNNHGQYRECWMVNPS-STSPSHMEMFKHFGYFIGAAIRSRQALP 3874

Query: 324  LPLSPLVWKLIVQEPVTFTDLEDNDTLYA---QSLRAIRDI--HLSGVTEANFPEIIPLE 378
            L L+P+ WKL++ E  T  + E    L A    S + I D+  +  G+++ +F   I  E
Sbjct: 3875 LDLAPIFWKLLIDETDTENEAEREMNLKAFDTYSWQVIEDLRNNAKGLSDEDFEAAIE-E 3933

Query: 379  CFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             F      G    ++ GG+++ +T +N  +Y +  I
Sbjct: 3934 NFVTLLSNGAQVELIPGGRNMRVTKSNLDEYIKQVI 3969



 Score = 43.1 bits (100), Expect = 0.33,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 12   FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLALSNKN-- 68
            +K I  V +S+ T H +A++ TG+++ WG+N   +LGL  N     +P L+   S+ +  
Sbjct: 3146 YKTIKFVKLSMHTNHAMAITETGELYGWGSNIGYKLGLDQNMPIINKPTLIPYFSDTSRI 3205

Query: 69   -IRQVSAGRSHS 79
             + +V+ G  H+
Sbjct: 3206 KVIEVACGDDHT 3217


>gi|401408841|ref|XP_003883869.1| hypothetical protein NCLIV_036180 [Neospora caninum Liverpool]
 gi|325118286|emb|CBZ53837.1| hypothetical protein NCLIV_036180 [Neospora caninum Liverpool]
          Length = 9715

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 14/220 (6%)

Query: 214  IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLV 273
            +F Q+  Q+  +    LR   RAW V   GEG  DAGG+F D+IT +  EL S   PL +
Sbjct: 9238 VFGQLYSQLSAVSPKRLRSHGRAWYVLYEGEGGIDAGGLFRDSITHIAQELQSPYSPLFM 9297

Query: 274  RTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKL 333
              PN     G N+DR++ +P    S   L  + FLG L GVA+R    L L L   +WK 
Sbjct: 9298 PCPNSRG-FGDNQDRWVPSPRCV-SASHLSMYHFLGRLMGVAVRGHLCLDLDLPATLWKP 9355

Query: 334  IVQEPVTFTDLEDNDTLYAQSLRA-----------IRDIHLSGVTEANFPEIIPLECFEG 382
            +V   V   DLE  DTL  Q L+            +  +  S V+   FPE  PL C+  
Sbjct: 9356 VVGLDVGAQDLEAVDTLCVQILQKPSLSSPFTSSQVCKLRSSQVSPEAFPEEYPL-CWHT 9414

Query: 383  ASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSA 422
                G I  + +GG+ + + + +R  Y    +AC  + ++
Sbjct: 9415 TLSDGCIVELRSGGKDLCVQWEDRADYARRTVACRLEETS 9454


>gi|342185447|emb|CCC94930.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 4459

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 164/366 (44%), Gaps = 41/366 (11%)

Query: 127  LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPL--VRSV 184
            L+LL    ++ Y    L+P  +     ++C   + L  P  R L     Y LP+  +R++
Sbjct: 3945 LQLLVSLQNITYLAETLIPYASTVTMPLECD--TLLSGPIHRALSQLHDYMLPVAGLRAL 4002

Query: 185  ----GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQIS-------RQVVKMKGSDLRLP 233
                 +T   G++   ++  R+  +  K T   +  ++S         +++ KG+ L   
Sbjct: 4003 HTFLAQTKCSGESLKLTLNRRKALSLMKDTSVSLVERLSGSLFGQVYHLLRDKGASLFCT 4062

Query: 234  SRA-WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILN 292
            S+  W V  +GEGADD GG + ++IT++C E++S  +PL + +PN   + G  R+  ++ 
Sbjct: 4063 SKKLWSVNFVGEGADDIGGPYRESITQLCSEVMSPDLPLFIPSPNQTNEIGECREVVVVR 4122

Query: 293  PDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYA 352
            P L E+   L  + F G   G  +R+ +P+P+ LS  VWK I+  PV   DL   D    
Sbjct: 4123 PAL-EAPVRLDMYHFFGRFIGGCLRSSEPVPVYLSSRVWKAILGAPVDARDLGRVDAAAL 4181

Query: 353  QSLRAIRDIHL-------SGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFAN 405
            QS R I+  H+       SG  +    E+ P   F      G    +  GG+++ +   N
Sbjct: 4182 QSYRYIQQ-HISSAVGDGSGAIDEEIAELCP-GGFSVVDDIGVEQELFPGGRAIRVNGRN 4239

Query: 406  RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK-VHVE 464
               + E A+            +  L+T G      +  G   +  VP   V+L K   +E
Sbjct: 4240 VHIFLELAL------------HYRLHTMGEAQIRAIADG--FHQVVPLSAVSLLKWYELE 4285

Query: 465  SVSCGL 470
             + CGL
Sbjct: 4286 RIVCGL 4291


>gi|300123652|emb|CBK24924.2| unnamed protein product [Blastocystis hominis]
          Length = 679

 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 147/338 (43%), Gaps = 44/338 (13%)

Query: 107 DIPDHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLG--------NVDQDWVQCTP 158
           D   HYG L +     IR RL  L  F+  + ++V L+ LG         + +     T 
Sbjct: 201 DKARHYG-LNSFSRLDIRLRLFFLQYFNAQLQRIVHLVDLGLPRDSGIITLGRILAGLTG 259

Query: 159 YSWLVHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTV--RRLTTKSKQTVKP--- 213
           Y          +FAP V    L  ++ +T+  GK+  P V +  RR+ T  ++   P   
Sbjct: 260 Y----------IFAP-VKEHVLALTISQTVYHGKDCYPVVELDNRRVFTAMERDALPSRG 308

Query: 214 -------------IFAQISRQVVKMKGSDLRLP----SRAWKVKLLGEGADDAGGVFDDT 256
                         FAQ+ R+   +    LR P     R   VKL GE   D  G++ DT
Sbjct: 309 SDTETQHALSSQCTFAQLFRETRDIPVEVLRAPLDGRERLLAVKLKGEQGLDWDGIYRDT 368

Query: 257 ITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAI 316
           I     +L S  + L +   N          +Y+ NP   ES  +L  + F+G L G+A+
Sbjct: 369 IERCIDDLFSDRIDLFLACQNAREPNSPGEMKYLPNPKYRESSDALAMYSFVGNLIGIAL 428

Query: 317 RTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIP 376
           RTK+ +   L   VWK IV + VT  D++  D  +  +LR + +   +  +E +F E+  
Sbjct: 429 RTKQRMAFELCSAVWKTIVGDVVTIDDVDSVDHAFVSTLRQVNEFTQTDDSE-DFQELFV 487

Query: 377 LECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
           L  F      G    ++  G  VP+ ++NR ++Y+ A+
Sbjct: 488 LT-FSVLDSAGNEVELMPSGSQVPVPYSNRSKFYQLAL 524


>gi|300175592|emb|CBK20903.2| unnamed protein product [Blastocystis hominis]
          Length = 1125

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 9/206 (4%)

Query: 214 IFAQISRQVVKMKGSDLRLP----SRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAV 269
           +FAQ  RQ+ +   S LR       R   +K  GE   D GG++ D +     +L S  +
Sbjct: 768 MFAQFCRQMQRFPVSVLRAKLDSKDRLVAIKYKGEQGLDWGGLYRDAVERCVEDLFSDHI 827

Query: 270 PLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPL 329
            L +  PN + D     +R+I NP   +S ++L  ++F+G L GV++RTK  L   LSP 
Sbjct: 828 DLFIPCPNAMNDQE-TEERFIPNPRYRDSSEALEMYRFVGNLIGVSLRTKHLLSFELSPQ 886

Query: 330 VWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS-GVTEANFPEIIPLECFEGASWTGR 388
           +WK IV + VT  D++  D+    +L+ +R+   S GV E  FP +  +  F      G 
Sbjct: 887 IWKTIVGDEVTEEDIKAVDSGLISTLQQVREYSESDGVDE--FPFVFDM-VFAILDSAGN 943

Query: 389 ITPIVTGGQSVPLTFANRLQYYEAAI 414
              ++  G  + +TF NRL++ + A+
Sbjct: 944 EVELLPSGSQIAVTFHNRLKFCKMAL 969


>gi|66807495|ref|XP_637470.1| hypothetical protein DDB_G0286931 [Dictyostelium discoideum AX4]
 gi|60465893|gb|EAL63963.1| hypothetical protein DDB_G0286931 [Dictyostelium discoideum AX4]
          Length = 5222

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 101/198 (51%), Gaps = 4/198 (2%)

Query: 214  IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLV 273
            +F Q  RQ+  +    LR   RAW+VKL  EGA DAGG + D +T++  +L S  + L +
Sbjct: 4837 LFLQSYRQLCLLDPLRLRHNDRAWEVKLEREGARDAGGPYRDCMTQIVTDLQSRDMNLFL 4896

Query: 274  RTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKL 333
               N   D  +NRD+ + N   +  L +L  F+++G L G+AIRTK  + L L  +VWK 
Sbjct: 4897 PCQNAQGDVAFNRDKLVPNSSANSPL-ALQLFEYIGKLIGIAIRTKNCIELSLPSIVWKS 4955

Query: 334  IVQEPVTFTDLEDNDTLYAQSLRAIRDI--HLSGVTEANFPEIIPLECFEGASWTGRITP 391
            +V   V   DL+  D      L  +       S +T   F + I  + F   S  G +  
Sbjct: 4956 LVCAKVDRQDLKTIDKYITNFLELLEGTSNEESKLTNEVFSDYID-QNFTAHSIDGSLIE 5014

Query: 392  IVTGGQSVPLTFANRLQY 409
            ++  G+S+ + + NRL+Y
Sbjct: 5015 LIPDGKSIQVHWDNRLEY 5032


>gi|403351165|gb|EJY75066.1| HECT E3 ubiquitin ligase, putative [Oxytricha trifallax]
          Length = 4194

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 19/208 (9%)

Query: 214  IFAQISRQV--------VKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELL 265
            IF QI + +         +  G+D    S+ +  K +GEG+ DAGG + +++T +C E+ 
Sbjct: 3823 IFGQIYQSINRNNDFSCFRQNGTD----SKIYSAKFIGEGSIDAGGPYRESLTNICDEIE 3878

Query: 266  SGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLP 325
            S  +PLL++TPN   + G NRD +I N   S +   +  FKFLG   G AIRT  P  L 
Sbjct: 3879 SENLPLLIKTPNNRNNHGENRDCFIPNM-ASNNPTHIELFKFLGYFIGYAIRTLCPFQLH 3937

Query: 326  LSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGV--TEANFPEIIPLECFEGA 383
              P+ WK ++ + +T  DL+  DT    S + I D+    V  ++  F  I+  E F   
Sbjct: 3938 FPPIFWKQVLNDKLTLQDLKGYDTY---SWQIIEDLKKQSVKLSDKEFSAIVE-ETFVTR 3993

Query: 384  SWTGRITPIVTGGQSVPLTFANRLQYYE 411
               G    +  GG++V +T  N  +Y +
Sbjct: 3994 LSDGSEVELKVGGKNVLVTKDNLQEYVD 4021


>gi|330795377|ref|XP_003285750.1| hypothetical protein DICPUDRAFT_86857 [Dictyostelium purpureum]
 gi|325084298|gb|EGC37729.1| hypothetical protein DICPUDRAFT_86857 [Dictyostelium purpureum]
          Length = 4664

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 5/199 (2%)

Query: 214  IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLV 273
            +F Q  RQ+  M    L+   RAW+VKL  EGA DAGG + + +T++  +L S  + L +
Sbjct: 4277 LFLQSFRQLCYMDPLRLKHNDRAWEVKLEREGARDAGGPYRECMTQIVTDLQSREMNLFL 4336

Query: 274  RTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKL 333
               N   D  +NRD+ + N   +  L +L  ++++G L G+AIRTK  + L    ++WK 
Sbjct: 4337 PCQNAQGDVAFNRDKLVPNSSANSPL-ALQLYEYIGRLIGIAIRTKNCIELSFPSIIWKS 4395

Query: 334  IVQEPVTFTDLEDND---TLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRIT 390
             V   V   DLE  D   T + + L      + + +T   FP+ +  + F   S      
Sbjct: 4396 FVCAKVERVDLEAIDKYTTNFIELLEGTSTTNETKLTPDIFPDCVD-QTFIARSIDNNEV 4454

Query: 391  PIVTGGQSVPLTFANRLQY 409
             ++  G+ +P+T+ NR +Y
Sbjct: 4455 ELIPDGRLIPVTWENRSEY 4473


>gi|298710221|emb|CBJ26296.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 6601

 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 143/309 (46%), Gaps = 22/309 (7%)

Query: 114  HLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWV--QCTPYSWLVHPSLR-PL 170
             L   P   +  R  LL R +D I +V+ ++ L +   D +  Q    + LV P ++ P+
Sbjct: 6142 RLATVPAASLHIRAALLLRLNDRIERVLPVIDLASRQPDSLGWQLREMNHLVLPHIKVPV 6201

Query: 171  FAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDL 230
                   L   +  G  + V  +   ++  R    +   + + +FAQ  RQ+       L
Sbjct: 6202 LE---AALIATQGPGDGVAVTLDNIKAMVSRDRGERDLTSSQCVFAQAYRQLCDTDPKVL 6258

Query: 231  RL---PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRD 287
            R      R +++  +GE   DAGGVF + ++ M  +L S    LLV  PNG    G N +
Sbjct: 6259 RTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSQDFDLLVPCPNGRHAVGQNNE 6318

Query: 288  RYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDN 347
            +++ N   S  L +L   +F+G L G+++RT+  LP  L  L+WK ++   V F DL   
Sbjct: 6319 KFVPNSQHSSPL-ALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLGLHVDFEDLSMV 6377

Query: 348  DTLYAQSLRAIRDIHLSGV-TEANFPEIIPLECFEGASWTG------RITPIVTGGQSVP 400
            DT+  Q + AIR     G+ T+  F  +     F   ++TG       +TP   GG +  
Sbjct: 6378 DTIITQFITAIRTCENDGLTTDEEFRGMYGDRLF--FTYTGSDGVERELTP---GGAARR 6432

Query: 401  LTFANRLQY 409
            +TF NRL +
Sbjct: 6433 VTFENRLTF 6441


>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
          Length = 1126

 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 1/84 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG +HSA V+ N  LYT+GNG Y RLGHG T +  +P++VV L   +V  VSCG+NHT
Sbjct: 127 IDCGDQHSAFVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHT 186

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           + +  +G  VYA+GDG YGKLG+ 
Sbjct: 187 LIVTGEG-FVYAWGDGMYGKLGVS 209



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 46/82 (56%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           AC  K SA++T  G ++TFG  D G LGH     + VPE  +  +   +  ++CG    V
Sbjct: 488 ACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDIPQMIYIACGPQGMV 547

Query: 475 CIADKGKAVYAFGDGEYGKLGL 496
            I+   + +YA+G+  YG+LG+
Sbjct: 548 SISAHKRQLYAWGNNIYGQLGI 569



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 5/92 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H+ ++  N  LY+FG G  G LG+    + K+P++ + L +  V+ V+CG  H+
Sbjct: 26  IACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQ-LNLKQKFVQ-VACGATHS 83

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTG--LKP 503
           + +   G  ++++G    G+LG GN    LKP
Sbjct: 84  LALTISG-IIFSWGKNLRGQLGHGNQNDCLKP 114



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 9/112 (8%)

Query: 393 VTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-V 451
           VT  + +P        YY   ++CG  H+ +VT  G++Y +G+G YG+LG       + +
Sbjct: 158 VTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTL 217

Query: 452 PERVVAL------NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           P RV  +      NK++ + V+ G  H++ ++  G+ ++ +G  + G LG+G
Sbjct: 218 PTRVGMICKKFRKNKMYYQ-VAAGSMHSLALSTNGQ-IFTWGSSKSGNLGIG 267



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLAL- 64
           + +   ++ ++  +S G  H L V+  G V+AWG+    +LG+      +  P  V  + 
Sbjct: 166 KKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMIC 225

Query: 65  ----SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPL 120
                NK   QV+AG  HS A +       T G + S +L +G  +DI D+Y   Q   +
Sbjct: 226 KKFRKNKMYYQVAAGSMHSLALSTNG-QIFTWGSSKSGNLGIGYNKDIQDYYTQPQKISI 284

Query: 121 PLIRARLKLLNRFSDLIYQ 139
            L   + K L  FS   YQ
Sbjct: 285 KL--NKDKNLQFFSLQYYQ 301



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ-VSAG 75
            V ++ G  H LA++ +G +F+WG N   QLG GNQ +  +P+ V  + N  I + +  G
Sbjct: 73  FVQVACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEV--IQNDIIAEYIDCG 130

Query: 76  RSHSA 80
             HSA
Sbjct: 131 DQHSA 135



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 25/48 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY 55
            I  FKN  I  IS    H +A+S  GQ + WG N   QLG+G   NY
Sbjct: 421 QIQYFKNNIIRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNY 468



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 7/96 (7%)

Query: 406 RLQYYEAAI----ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNK 460
           ++QY++  I    +C + H+  ++  G  Y +G   Y +LG G + N+  +P+++  + +
Sbjct: 421 QIQYFKNNIIRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILE 480

Query: 461 VHVESVS-CGLNHTVCIADKGKAVYAFGDGEYGKLG 495
                +S C    +  + DKG+ V+ FG  + G LG
Sbjct: 481 TKTIIMSACSDKFSALLTDKGE-VWTFGTSDCGVLG 515


>gi|301091299|ref|XP_002895837.1| Hect-domain containing peotein, putative [Phytophthora infestans
            T30-4]
 gi|262096548|gb|EEY54600.1| Hect-domain containing peotein, putative [Phytophthora infestans
            T30-4]
          Length = 2300

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 12/206 (5%)

Query: 212  KPIFAQISRQVVKMKGSDLRL--------PSRAWKVKLLGEGADDAGGVFDDTITEMCGE 263
            + +FA   +Q+  +  S LR         P  ++ V   GE     GG +     ++  E
Sbjct: 1907 RSLFASTMKQLSAISPSLLRAKRPTGASDPFVSFIVIFAGENVVGEGGPYRQLFNDISNE 1966

Query: 264  LLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLP 323
            LL+   PL + T N V   G  R+RY+  P  S S + L  F+F+GIL G  +RT   L 
Sbjct: 1967 LLASGNPLFIPTQNNVMKAGEFRERYMPKPS-STSKELLQMFEFVGILMGCCLRTGVRLN 2025

Query: 324  LPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGA 383
            L L+PLVWK++V++ +  TDLE  D    +SL+ + +  L+     +  E++  + F   
Sbjct: 2026 LRLAPLVWKMLVKQNLVLTDLESVDYSLCESLKFLEE--LASAPSDDLSEVL-FDSFTTT 2082

Query: 384  SWTGRITPIVTGGQSVPLTFANRLQY 409
               G +  + TGGQ + +T AN  +Y
Sbjct: 2083 LSDGTVVELKTGGQQLSVTKANAKEY 2108


>gi|348677551|gb|EGZ17368.1| hypothetical protein PHYSODRAFT_560031 [Phytophthora sojae]
          Length = 2313

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 19/222 (8%)

Query: 196  PSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRL--------PSRAWKVKLLGEGAD 247
            PS+T+R          + +FA   +Q+  +  S LR         P  ++ V   GE   
Sbjct: 1912 PSLTLR-------DPKRSLFASTMKQLSAIPPSLLRAKRPTGASDPFVSFIVIFAGENVV 1964

Query: 248  DAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKF 307
              GG +     ++  ELL+   PL + T N V   G  R+R++  P  S S + L  F+F
Sbjct: 1965 GEGGPYRQLFNDISNELLASGNPLFIPTQNNVMKAGEFRERFMPKPS-STSKELLQMFEF 2023

Query: 308  LGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVT 367
            +GIL G  +RT   L L L+PLVWK++V++ +   DLE  D    +SL+ + ++     T
Sbjct: 2024 VGILMGCCLRTGVRLNLRLAPLVWKMLVKQNLVLADLESVDHSLCESLKFLEEL---AST 2080

Query: 368  EANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQY 409
             +  P+ +  + F      G I  +  GGQ +P+T AN  +Y
Sbjct: 2081 PSEGPDEVLFDSFTTTLSDGTIVELKEGGQHLPVTKANAKEY 2122


>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 954

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 63/93 (67%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG KHS  +TS G +Y++G+G+ GRLGHG   +  VP +++AL +  +E VSCG +HT
Sbjct: 301 IACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYVSCGGSHT 360

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++D+   V+ FG G  G+LGLG+T    TPQ
Sbjct: 361 AVVSDQN-LVFTFGRGRNGRLGLGDTKCHDTPQ 392



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 3/118 (2%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+   GR+       ++VP      L++    ++CG  H+AVV+    ++TFG G  GRL
Sbjct: 321 GSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRL 380

Query: 442 GHGTTMNWKVPERV--VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           G G T     P+ V      K  +  V CG N T+ ++ +G+ V+++G    G+ GLG
Sbjct: 381 GLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIALSLEGR-VFSWGKQSEGQCGLG 437



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN---WKVPERVVALNKVHVESVSCGL 470
           +ACG+ HS  +TS   + ++G G+YG+LG G         + + + A    H + + CG 
Sbjct: 460 VACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQSLFACEGGHPQRIYCGA 519

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H++ I    K +YA+G   YG  GLG+T  +  P+
Sbjct: 520 FHSI-ITAGSKILYAWGLNSYGACGLGHTLNRDIPE 554



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 7/99 (7%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I+ I+ G +H +A+++ G+V++WG+  D +LG G   +   P+ ++AL    I  VS G 
Sbjct: 298 IIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYVSCGG 357

Query: 77  SHSAAWTAPPLPPHTPGHTPSSSLRLG------LPQDIP 109
           SH+A  +   L   T G   +  L LG       PQ++P
Sbjct: 358 SHTAVVSDQNL-VFTFGRGRNGRLGLGDTKCHDTPQEVP 395



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLALSNKNIR 70
           F+   I+ +  G    +A+S  G+VF+WG  S+ Q GLG    +   P L+  L +  I 
Sbjct: 399 FRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIEKLLDNRIV 458

Query: 71  QVSAGRSHSAAWTA 84
            V+ G +HS A T+
Sbjct: 459 DVACGYTHSLALTS 472



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 9/101 (8%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV------ALNKVHVES 465
           A IACG  H   ++S G +Y+  + D+       T   + P+ V       AL++  +  
Sbjct: 243 AEIACGGNHILYLSSAGDVYS--SEDHAISTTEPTNMLQTPQLVKELTLEKALHRRPIIH 300

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           ++CG  H+V +   G+ VY++G GE G+LG G    +  P+
Sbjct: 301 IACGAKHSVALTSAGE-VYSWGSGEDGRLGHGEMRDRNVPR 340



 Score = 42.0 bits (97), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV-SCGLNH 472
           I CG  HS +   +  LY +G   YG  G G T+N  +PER      +  + V  CG  +
Sbjct: 515 IYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRDIPERNDFFANIDTDVVLCCGHKY 574

Query: 473 TVCI-ADKGKAVYA--FGD 488
           T+ +  DK  +V A  FG+
Sbjct: 575 TIALEVDKVPSVSADSFGN 593


>gi|123426737|ref|XP_001307101.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121888711|gb|EAX94171.1| hypothetical protein TVAG_315770 [Trichomonas vaginalis G3]
          Length = 2865

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 4/198 (2%)

Query: 212  KPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPL 271
            + I +Q   Q    K   L+  S  W+V L+GEGA D GG   D  TE C E++  ++ L
Sbjct: 2499 ESILSQFIHQTTIEKIPALKRASVPWRVDLVGEGATDLGGPGRDLFTEACMEIMDPSMQL 2558

Query: 272  LVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
             ++TPN        +D  I NP    + QS   F + G+L  +   ++ P P   +  VW
Sbjct: 2559 FIQTPNKRRKIATAQDYLIPNPS-PLTPQSRDFFFYAGVLMTICYTSRLPEPFKFARFVW 2617

Query: 332  KLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITP 391
              + Q PVT  D+ + D+ + Q + +I +   S ++  +F     L  F   +  G I  
Sbjct: 2618 NSLTQRPVTLDDIYEIDSNFKQFILSIEN--SSSMSPQDFHSTYMLN-FTAENSLGSIVE 2674

Query: 392  IVTGGQSVPLTFANRLQY 409
            ++ GG  VP+TF  RL++
Sbjct: 2675 LIPGGSLVPVTFDRRLEF 2692


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG--LN 471
           + CG  +SA +++NG LYT+G G+YGRLGHGT  +   P  + AL+  H+  V+CG    
Sbjct: 572 VECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYA 631

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT+CI  +GK VY++GDG+YGKLG G +     P+
Sbjct: 632 HTLCITSQGK-VYSWGDGDYGKLGRGGSDGSKLPR 665



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 3/84 (3%)

Query: 414 IACG--FKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG  + H+  +TS G +Y++G+GDYG+LG G +   K+P  +  L  V +  V CG  
Sbjct: 624 VACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQ 683

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
            +V +++ G  VY +G GE  KLG
Sbjct: 684 FSVALSEDGH-VYTWGKGEGWKLG 706



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           KH   +T +  +Y++GNGD GRLGHG T   + P  + AL    +  V CG  ++  I+ 
Sbjct: 525 KHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISA 584

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G A+Y +G G YG+LG G      TP
Sbjct: 585 NG-ALYTWGRGNYGRLGHGTAEDCLTP 610



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 46/75 (61%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   ++  +V +S+G  HVLA+++ G+V+ WG N + Q+   +++  ++P+L+ AL  + 
Sbjct: 719 VEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQK 778

Query: 69  IRQVSAGRSHSAAWT 83
           +  V  G + S AWT
Sbjct: 779 VVGVCCGPAQSFAWT 793



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  ++ +G++YT+G G+  +LGH T  N + PE V  L    V  VS G++H 
Sbjct: 678 VYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHV 737

Query: 474 VCIADKGKAVYAFGDGE 490
           + + D+G+ VY +G  E
Sbjct: 738 LALTDQGE-VYGWGKNE 753



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 40/77 (51%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I   +N+ IV +  G +  +A+S  G V+ WG     +LG   + N R P++V  L +
Sbjct: 665 RLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRD 724

Query: 67  KNIRQVSAGRSHSAAWT 83
           + +  VS G SH  A T
Sbjct: 725 RKVVGVSLGVSHVLALT 741



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           + + A  +  ++ I+   E  H LA++   +V++WGN    +LG G+     EP L+ AL
Sbjct: 505 QEMTALDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQAL 564

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
             K+I  V  G ++SAA +A
Sbjct: 565 KGKDIIDVECGGTYSAAISA 584



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           I A  + HI+ ++ G+   H L +++ G+V++WG+    +LG G     + P+L+  L N
Sbjct: 613 ISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQN 672

Query: 67  KNIRQVSAGRSHSAA 81
             I QV  G   S A
Sbjct: 673 VKIVQVYCGAQFSVA 687



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 39/71 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A K   I+D+  G  +  A+S  G ++ WG  +  +LG G   +   P ++ ALS+++
Sbjct: 561 IQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEH 620

Query: 69  IRQVSAGRSHS 79
           I +V+ G  ++
Sbjct: 621 IIKVACGSFYA 631


>gi|398012334|ref|XP_003859361.1| hypothetical protein, conserved [Leishmania donovani]
 gi|398012336|ref|XP_003859362.1| hypothetical protein, conserved, partial [Leishmania donovani]
 gi|322497575|emb|CBZ32649.1| hypothetical protein, conserved [Leishmania donovani]
 gi|322497576|emb|CBZ32650.1| hypothetical protein, conserved, partial [Leishmania donovani]
          Length = 5648

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 21/252 (8%)

Query: 176  YTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKS--KQTVKPIFAQISRQVVKMKGSDLRLP 233
            ++L      G  + +  N   ++TV R +T S  ++    +F Q+  Q++  K  +  + 
Sbjct: 5051 WSLDASNGAGNAVRLSVNRRKALTVVRDSTASAVRRLRDSLFGQV-YQLLASKPPEFFIT 5109

Query: 234  SRA-WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILN 292
            S+  W V   GEGADD GG + + +T+M  EL+S ++ L + + N  ++ G  RD Y++N
Sbjct: 5110 SKKLWTVSFYGEGADDVGGPYRECLTQMSAELMSTSLALFLPSANMASELGEVRDSYVVN 5169

Query: 293  PDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYA 352
            P  +  L+ L  ++F+G L G  +R  +PL L LS  +WK +V E    TD+   D    
Sbjct: 5170 PLCAPPLE-LHMYRFIGRLMGGCLRGGEPLSLYLSSALWKYLVGEAADDTDMARIDMATL 5228

Query: 353  QSLRAIRDI--------HLSG-------VTEANFPEIIPLECFEGASWTGRITPIVTGGQ 397
             +L  +  +         L G       V +    E+ P   F   +  G +  +V GG+
Sbjct: 5229 NALGYVEQLAGFPSPRGALGGSGDGDDAVRDEELAELCP-RGFSLLNDAGVVEELVPGGE 5287

Query: 398  SVPLTFANRLQY 409
             +P+T A+   Y
Sbjct: 5288 QIPVTVASADLY 5299


>gi|440791927|gb|ELR13162.1| HECTdomain (ubiquitin-transferase) domain containing protein
           [Acanthamoeba castellanii str. Neff]
          Length = 676

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 150/358 (41%), Gaps = 68/358 (18%)

Query: 104 LPQDIP-------DHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQC 156
           LP+D+         HY  L++ P   ++ R   + +F+ L   V + LP  ++ Q  V+ 
Sbjct: 114 LPEDVDITTDIERQHYDKLRHVPSVALKLRFLCVQQFNVL---VSKALPFVDLTQHAVEG 170

Query: 157 TPYSWLVHPSLRPLFAPRVYTLPLVRSVGKTM--LVGKNFGPSVTVRRLTTKSKQT---- 210
           +    L       L    ++ L  V  +   +         PS+++ RL T S       
Sbjct: 171 SLARKL------SLLRHLIFYLTKVEFLDSILARTAATRPPPSISISRLKTLSMSADAAS 224

Query: 211 -VKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELL---- 265
             K +F Q+ +Q+  +  + LR   RA+KV L GE  +   G + +TI+++C EL     
Sbjct: 225 QEKTVFMQVYKQLGHLDPACLRQNERAFKVTLRGERVEGEVGPYQETISQLCSELQPEEA 284

Query: 266 -----------------------------SGAVPLLVRTPN-----GVADTGYNRDRYIL 291
                                           +PL V  PN          G NRD++IL
Sbjct: 285 MEPGSESTSTSTSTSTSTGEQQSDQQQQPEEVLPLFVPCPNRQQAMQTIGVGENRDKFIL 344

Query: 292 NPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLY 351
            P  S S + L  F+FLG L G+A RTK  L L L  L WK +V    T  DL+  D   
Sbjct: 345 KPS-SNSPEHLRMFEFLGKLMGIAARTKSILSLNLPALFWKPLVGVEPTLQDLKAIDYST 403

Query: 352 AQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQY 409
            +SL+ + ++      + +  +   LE F  +     I  +V GG+  PLT+ +R +Y
Sbjct: 404 MESLQRMTEM------DKDLFQASILENFTTSLSDKTIVELVPGGKERPLTYEDRKEY 455


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 11/118 (9%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G S T +I  +V G         N++      IA G++HSA VT +G LYT+G GDYGRL
Sbjct: 485 GNSQTQKIPKLVEGA------LGNKVV---CCIAAGYRHSAAVTEDGELYTWGEGDYGRL 535

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           GHG   +  VP +V   +  +V  V+CG  HTVC++  G+ V++FG G+ GKLG  +T
Sbjct: 536 GHGDNNSRNVPVQVK--DVANVGQVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDT 591



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNKNI 69
           A ++  +VDISVG  H +A++    V+AWGNNS  Q G G+      +P+ VL L    +
Sbjct: 653 ALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAV 712

Query: 70  RQVSAGRSHSAAWTAPPL 87
            Q+SAG SH+ AWTA P+
Sbjct: 713 HQISAGTSHTVAWTALPM 730



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNHTVCIAD 478
           H+  +T +G +Y++G+GDYG+LGHG +   K+P+ V  AL    V  ++ G  H+  + +
Sbjct: 461 HTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTE 520

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G+YG+LG G+   +  P
Sbjct: 521 DGE-LYTWGEGDYGRLGHGDNNSRNVP 546



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 8/102 (7%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV---HVE 464
           Q  EA   C F    V+  +G+++  G G YGRLG G + N    +R+   N+     V 
Sbjct: 398 QQIEAGQYCTF----VIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVS 453

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           S      HT+ +   GK VY++GDG+YGKLG GN+  +  P+
Sbjct: 454 SSKGSDGHTLALTLDGK-VYSWGDGDYGKLGHGNSQTQKIPK 494



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 2/77 (2%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+  V+ +G  +++FG+GD G+LGH  T     P+ + AL  + +  V CG   
Sbjct: 558 VACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQC 617

Query: 473 TVCIADKGKAVYAFGDG 489
           ++ +   G+ VY +G G
Sbjct: 618 SLALTSTGQ-VYVWGCG 633



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIRQVSAGRSHSAAWT 83
           H LA++  G+V++WG+    +LG GN    + P+LV  AL NK +  ++AG  HSAA T
Sbjct: 461 HTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVT 519



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALSNK 67
           I A + + I  +  G++  LA+++TGQV+ WG      LG G+       P+L+LAL + 
Sbjct: 600 IEALQGMVIRKVCCGSQCSLALTSTGQVYVWG--CGPSLGTGSVDATSATPKLLLALQSH 657

Query: 68  NIRQVSAGRSHSAAWT 83
           ++  +S G SH  A T
Sbjct: 658 SVVDISVGDSHCVALT 673



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESVSCGLNH 472
           I+ G  H   +T +  +Y +GN   G+ G G  T     P++V+ L+ V V  +S G +H
Sbjct: 662 ISVGDSHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSH 721

Query: 473 TV 474
           TV
Sbjct: 722 TV 723


>gi|403366942|gb|EJY83279.1| HECT E3 ubiquitin ligase, putative [Oxytricha trifallax]
          Length = 4202

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 62/177 (35%), Positives = 91/177 (51%), Gaps = 3/177 (1%)

Query: 235  RAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPD 294
            RAW  K +GEG+ D GG + +T  EMC EL S A+PLL+ T N   D G +RD++I    
Sbjct: 3854 RAWNSKFVGEGSIDVGGPYRETFFEMCKELQSHALPLLIATSNHKNDFGEHRDKWIPCSS 3913

Query: 295  LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQS 354
             S      M F+F+G L G++IR  + L L    + WK I+ EP+  +DL   D+   Q 
Sbjct: 3914 SSSPSHIAM-FEFMGALIGMSIRCSQILNLNFPSVFWKKIIDEPLDRSDLNMVDSYCLQM 3972

Query: 355  LRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYE 411
            L  I+++  + + E  F E    + F      G    +V GG++  LT  N   Y +
Sbjct: 3973 LDGIKNLAQT-LPEKEFQEYHD-QKFVTCLTDGSEIELVPGGKNKILTKDNADDYVQ 4027


>gi|325185040|emb|CCA19532.1| HECT E3 ubiquitin ligase putative [Albugo laibachii Nc14]
          Length = 4646

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 102/224 (45%), Gaps = 33/224 (14%)

Query: 212  KPIFAQISRQVVKMKGSDLRLP---------SRAWKVKLLGEGADDAGG----VFDDTIT 258
            + +F Q+ R++     S  R            RA+KVK LGEG +D GG    VF+  + 
Sbjct: 4251 RSVFGQLYREMRSWMDSSFRRAYCGKGHGGQRRAFKVKFLGEGVNDYGGPYRAVFEQVVD 4310

Query: 259  EMC--------GELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQS-----LMHF 305
            E+         GE   G +PLL+  PN    TG N+D+++LNP    SLQS     L  +
Sbjct: 4311 ELQLDNVELSKGE--QGLLPLLIPCPNRRTGTGSNQDKFLLNPSCGISLQSNAPMALELY 4368

Query: 306  KFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSG 365
            +FLG L G A+R    + L L  LVW+ I    V    LE  D     +L  + +   SG
Sbjct: 4369 RFLGKLIGTAVRHGLQMGLNLPSLVWRPIAGLEVGRPHLESVDVAATNNLMYVEE--FSG 4426

Query: 366  VTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQY 409
                 F E +    F      G   P+  GG+ + +TF NRL Y
Sbjct: 4427 QDAKEFLEHL---TFSTPLSDGNEIPLCPGGEKLAVTFDNRLTY 4467


>gi|428170788|gb|EKX39710.1| hypothetical protein GUITHDRAFT_76204, partial [Guillardia theta
           CCMP2712]
          Length = 398

 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)

Query: 196 PSVTVRR--LTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSR-----AWKVKLLGEGADD 248
           PS+++ R   T   ++    +F Q+   V   K +   +  R     AW     GEG  D
Sbjct: 15  PSISLNRGICTADKRKRELTVFWQVFNAVESKKATLRSVEKRGSGNQAWITTFEGEGGSD 74

Query: 249 AGGVFDDTITEMCGEL--LSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFK 306
            GG+F +++ E+C EL  ++G++ L V  PN     G N+D++I N   + +L  L  F+
Sbjct: 75  HGGLFRESVREICAELQSINGSLKLFVPCPNQRMCIGENQDKWIPNIFATSALH-LSMFR 133

Query: 307 FLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGV 366
           F+G L G+AIRT   L L L+ LVWK +V E    +D+   D  +    +  RD+    +
Sbjct: 134 FVGSLMGMAIRTNSLLELDLASLVWKRLVGELANLSDIFRMDEAFRAHYQLGRDVDEQDL 193

Query: 367 TE-ANFPEIIPLECFEGASWT-----GRITPIVTGGQSVPLTFANRLQYYEAAI 414
           +  A+  + I     +G +WT     GR   ++ GG    + + ++ +Y    +
Sbjct: 194 SSCASERDWIA----KGITWTYRSSMGRHLVLIPGGGDTDVQWQDKDKYLAEVV 243


>gi|281207233|gb|EFA81416.1| putative ubiquitin-protein ligase [Polysphondylium pallidum PN500]
          Length = 4114

 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 8/186 (4%)

Query: 228  SDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRD 287
            S LR   RA++VKL  EGA DAGG + + IT++  E+    + L +   N   D  +NRD
Sbjct: 3725 SRLRHNDRAFEVKLEREGARDAGGPYRECITQIISEIQGSEMNLFLPCHNAQGDVAFNRD 3784

Query: 288  RYILNPDLSESLQSLMH-FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLED 346
            + +  P+ SE+    +H ++F+G L G+AIRTK  + L    + WK +V   V   DLE 
Sbjct: 3785 KLV--PNSSENSPFSLHLYEFVGKLIGIAIRTKNCIELSFPSIFWKSLVCAKVDRQDLEA 3842

Query: 347  NDTLYAQSLRAIRDIHLSG---VTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTF 403
             D  Y+ +L  + +   +G   + +  F E+I  + F   S    +  +V  G++  +T+
Sbjct: 3843 IDK-YSTNLFEMMEKSPTGRNSLDQEMFNELI-FQNFTTRSIDNSVVELVQDGKNQSVTW 3900

Query: 404  ANRLQY 409
            +NRL++
Sbjct: 3901 SNRLEF 3906


>gi|157866370|ref|XP_001681891.1| conserved hypothetical protein [Leishmania major strain Friedlin]
 gi|68125190|emb|CAJ03148.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 5636

 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 21/248 (8%)

Query: 176  YTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKS--KQTVKPIFAQISRQVVKMKGSDLRLP 233
            ++L      G  + +  N   ++TV + +T S  ++    +F Q+  Q++  K  +  + 
Sbjct: 5039 WSLDTSNGAGNAVRLSVNRRKALTVVQDSTASAVRRLRDSLFGQV-YQLLASKPPEFFIT 5097

Query: 234  SRA-WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILN 292
            S+  W V   GEGADD GG + + +T+M  EL+S ++ L + + N  ++ G  RD Y++N
Sbjct: 5098 SKKLWTVSFYGEGADDVGGPYRECLTQMSAELMSTSLALFLPSANMASELGEVRDSYVVN 5157

Query: 293  PDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYA 352
            P  +  L+ L  ++F+G L G  +R  +PL L LS  +WK +V E    TD+   D    
Sbjct: 5158 PLCAPPLE-LHMYRFIGRLMGGCLRGGEPLSLYLSSALWKYLVGEAADDTDMARIDMATL 5216

Query: 353  QSLRAIRDI--------HLSG-------VTEANFPEIIPLECFEGASWTGRITPIVTGGQ 397
             +L  +  +         L G       V +    E+ P   F   +  G +  +V GG+
Sbjct: 5217 NALGYVEQLAGFPSPSGALGGSGDSDDAVRDEELAELCP-RGFSLLNDAGIVEELVPGGE 5275

Query: 398  SVPLTFAN 405
             +P+T A+
Sbjct: 5276 QIPVTVAS 5283


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +ACG +HS  +T  G LYT+G+G+ GRLGHG   +  VP +V++L +  V S SCG  
Sbjct: 556 AMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +  KG +V+ FG G  G+LGLG+   + TP 
Sbjct: 616 HTAVLTAKG-SVFTFGRGRNGRLGLGDNKWRDTPH 649



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-----VALNKVHVESVSC 468
           +ACG+ H+ V+T++G LY++G G+YG+LG G      +P RV            +  V C
Sbjct: 719 VACGYTHTVVLTASGELYSWGLGEYGQLGTGDVYQ-PLPARVQLPADALCAPDQLARVYC 777

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           G  H++   ++ + ++A+G   YG  GLG+T  K  P+
Sbjct: 778 GAFHSIATTEQ-RVMFAWGLNSYGACGLGHTANKDKPE 814



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 2/117 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+   GR+       ++VP    + L+    + +CG  H+AV+T+ G ++TFG G  GRL
Sbjct: 578 GSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRL 637

Query: 442 GHGTTMNWKVPERVVALNK-VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           G G       P  +V   +   +  V CG N T  + D+  +V+ +G    G+ GLG
Sbjct: 638 GLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAAL-DRQGSVFTWGKTGEGQCGLG 693



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 6/96 (6%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKV---HVESVSCG 469
           + CG+  +A +   G ++T+G    G+ G G    +  VP  V  L  V    V  V+CG
Sbjct: 663 VVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYVDRDQVVPRCVDKLRDVAGSSVVDVACG 722

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             HTV +   G+ +Y++G GEYG+LG G+   +P P
Sbjct: 723 YTHTVVLTASGE-LYSWGLGEYGQLGTGDV-YQPLP 756



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 25/117 (21%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG------HGTTMNWKVPERVV----------- 456
           +ACG +H   +TS G +Y++G+ +  ++       H +T+      RVV           
Sbjct: 482 VACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAPHLV 541

Query: 457 -------ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
                  AL++  +  V+CG  H++ I D G+ +Y +G GE G+LG G+   +  P+
Sbjct: 542 EELALEKALHRTTIAMVACGAQHSLAITDAGE-LYTWGSGEDGRLGHGDMRDRAVPR 597



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 43/74 (58%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
           A     I  ++ G +H LA+++ G+++ WG+  D +LG G+  +   P+ V++L  +++ 
Sbjct: 549 ALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVV 608

Query: 71  QVSAGRSHSAAWTA 84
             S G +H+A  TA
Sbjct: 609 SASCGGAHTAVLTA 622



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 30/65 (46%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A + CG  HS   T    ++ +G   YG  G G T N   PER+   +      V+CG  
Sbjct: 773 ARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTELVVACGHK 832

Query: 472 HTVCI 476
           +T+ +
Sbjct: 833 YTIAL 837


>gi|401417711|ref|XP_003873348.1| conserved hypothetical protein [Leishmania mexicana
            MHOM/GT/2001/U1103]
 gi|322489577|emb|CBZ24835.1| conserved hypothetical protein [Leishmania mexicana
            MHOM/GT/2001/U1103]
          Length = 5610

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 19/247 (7%)

Query: 176  YTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKS--KQTVKPIFAQISRQVVKMKGSDLRLP 233
            ++L      G  + +  N   ++TV R +T S  ++    +F Q+ + +           
Sbjct: 5016 WSLDASNGAGNAVRLSVNRRKALTVVRDSTASAVRRLRDSLFGQVYQLLASKPPEFFITN 5075

Query: 234  SRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNP 293
             + W V   GEGADD GG + + +T+M  EL+S ++ L + + N  ++ G  RD Y++NP
Sbjct: 5076 KKLWTVSFYGEGADDVGGPYRECLTQMSAELMSTSLALFLPSANMASELGEVRDSYVVNP 5135

Query: 294  DLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLE--DNDTL- 350
              +  L+ L  ++F+G L G  +R  +PL L L   +WK +V E    TD+   D  TL 
Sbjct: 5136 LCAPPLE-LHMYRFIGRLMGGCLRGGEPLSLYLPSALWKCLVGEAADDTDMARIDMATLN 5194

Query: 351  ---YAQSLRAIRDIH--LSG-------VTEANFPEIIPLECFEGASWTGRITPIVTGGQS 398
               Y + L   R     L G       V +    E+ P   F   +  G +  +V GG+ 
Sbjct: 5195 ALGYVEQLAGFRSPRGALGGSGDGDNVVRDEELAELCP-RGFSLLNDAGVVEELVPGGEQ 5253

Query: 399  VPLTFAN 405
            +P+T  +
Sbjct: 5254 IPVTVTS 5260


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ GF HSA V +NG L T+G G+ G+LGHG T N   P+ + +L    +  V CG  HT
Sbjct: 694 VSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHT 753

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTG--LKPTP 505
           +C+   GK VY +G  EYG+LGLG+T    KP P
Sbjct: 754 ICLTKNGK-VYTWGSSEYGQLGLGDTTRYCKPMP 786



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T  Q  P    +   ++   + CG KH+  +T NG +YT+G+ +YG+LG G T  +  P 
Sbjct: 726 TQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPM 785

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
            V AL K +V  ++ G  H   + +  K V  FG+G
Sbjct: 786 PVTALEKYNVLQIASGSTHCAVLTN-SKEVLVFGNG 820



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG   +A ++  G +YT+G G    LGHG       P+ V AL    +  +SCG  HT
Sbjct: 846 LCCGHYSTAAISECGDVYTWGTGQ--ELGHGNNQTESTPKLVEALRNQSIRQISCGGRHT 903

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
             + D G+ ++  G   +G+LG
Sbjct: 904 AFLTDSGR-IFTSGKDSFGQLG 924



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +P+ K +HI  +  G     A+S  G V+ WG  +  +LG GN      P+LV AL N++
Sbjct: 835 VPSLKYLHIDKLCCGHYSTAAISECGDVYTWG--TGQELGHGNNQTESTPKLVEALRNQS 892

Query: 69  IRQVSAGRSHSAAWT 83
           IRQ+S G  H+A  T
Sbjct: 893 IRQISCGGRHTAFLT 907



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 42/75 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +  +  I  +  G +H + ++  G+V+ WG++   QLGLG+   Y +P  V AL   N
Sbjct: 735 IQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYN 794

Query: 69  IRQVSAGRSHSAAWT 83
           + Q+++G +H A  T
Sbjct: 795 VLQIASGSTHCAVLT 809



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 1/69 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A +T +G ++T G   +G+LGH      K P+++ +L K    SVSCG N+ 
Sbjct: 896 ISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQAGDQNK-PKKIESLTKTTFISVSCGENYN 954

Query: 474 VCIADKGKA 482
           + + D  ++
Sbjct: 955 IALFDTTRS 963



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 37/67 (55%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           IV +S+G  H  AV   G++  WG   + QLG G+  N  EP+++ +L++  I QV  G 
Sbjct: 691 IVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGE 750

Query: 77  SHSAAWT 83
            H+   T
Sbjct: 751 KHTICLT 757


>gi|156339779|ref|XP_001620260.1| hypothetical protein NEMVEDRAFT_v1g4949 [Nematostella vectensis]
 gi|156204928|gb|EDO28160.1| predicted protein [Nematostella vectensis]
          Length = 112

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 1/113 (0%)

Query: 34  GQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPG 93
           G+V+ WG+N D QLGLG+    REP ++  L  KNIRQ+SAGR+HSAAWTAPP PP    
Sbjct: 1   GEVWGWGSNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHSAAWTAPPPPP-RFP 59

Query: 94  HTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPL 146
                 L+LG P+  P  +  L       +RARL++L+ FSDL+Y   ++  L
Sbjct: 60  PGAPLPLQLGHPEHTPPQFPALAEVSTVAVRARLRVLHHFSDLVYSSWKMFSL 112


>gi|389600660|ref|XP_001563264.2| conserved hypothetical protein [Leishmania braziliensis
            MHOM/BR/75/M2904]
 gi|322504463|emb|CAM45686.2| conserved hypothetical protein [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 5596

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 3/175 (1%)

Query: 176  YTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKS--KQTVKPIFAQISRQVVKMKGSDLRLP 233
            ++L    S G  + +  N   ++TV R  T S  ++    +F Q+ + +     +     
Sbjct: 4999 WSLESSNSGGDAVRLSVNRRKALTVVRDCTASAARRLRDSLFGQVYQLLASKPPAFFITS 5058

Query: 234  SRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNP 293
             + W V   GEGADD GG + + +T+MC EL+S ++ L + + N  ++ G  RD Y++NP
Sbjct: 5059 KKLWTVSFYGEGADDVGGPYRECLTQMCAELMSTSLDLFLPSANMTSELGEVRDSYVVNP 5118

Query: 294  DLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDND 348
              +  L+  M ++FLG L G  +R  +PL L L   +WK +V E     D+   D
Sbjct: 5119 LCAPPLEPHM-YRFLGRLMGGCLRGGEPLSLYLPSALWKYLVGEAADDADIARVD 5172


>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
           anubis]
          Length = 651

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGK 481
           ++ +   G+
Sbjct: 626 SLALTSTGQ 634



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVDIS+G  H L++S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
           Q  EA   C F    V++++G +   G G YGRLG G + N    +++      ++ KV 
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
               S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ + AL  + +  V  G   
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           ++I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AV+  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570

Query: 77  SHSAA 81
           SH+ A
Sbjct: 571 SHTIA 575


>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
 gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 2290

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 1/90 (1%)

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
           ++    +I  G +HSA ++    LYT+GNG Y RLGHG T +   P++VV L  V+V  V
Sbjct: 389 IEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHV 448

Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
           SCG+ HT+ I ++G  VYA+GDG  GKLG+
Sbjct: 449 SCGMTHTLAITNEG-FVYAWGDGMSGKLGV 477



 Score = 49.3 bits (116), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 30/138 (21%)

Query: 396 GQSVPLTFANRLQYYEAA------IACGFKHSAVVTSNGYLYTFGNGDYGR--------- 440
            QS   ++ N+ +  E        ++CG  H+ V+T  G ++ FG G  G+         
Sbjct: 249 AQSFVRSYVNKTEINEEIKDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQL 308

Query: 441 ------------LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGD 488
                       LG+   +N   P  ++   K     V+CG +H++ + D G+ ++ +G 
Sbjct: 309 LLQNKSKIQKGQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQ-IFTWGK 367

Query: 489 GEYGKLGLG--NTGLKPT 504
              G+LG G  N  LKPT
Sbjct: 368 NTRGQLGQGHRNDQLKPT 385



 Score = 45.4 bits (106), Expect = 0.061,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 44/81 (54%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVC 475
           C  + SA++T  G ++TFG  D G LGH     + V E  +  +   +  ++ G    + 
Sbjct: 850 CSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKMINDIPPMIFLASGPQGMMA 909

Query: 476 IADKGKAVYAFGDGEYGKLGL 496
           I ++ + +YA+G+  YG+LG+
Sbjct: 910 ITEQKRQIYAWGNNLYGQLGI 930



 Score = 45.4 bits (106), Expect = 0.069,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 18  VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
           + ++ G+ H +A+++ GQ+F WG N+  QLG G++ +  +P +++         + +G  
Sbjct: 344 IQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMIII--EVMATSICSGDQ 401

Query: 78  HSA 80
           HSA
Sbjct: 402 HSA 404



 Score = 44.3 bits (103), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + +   +++++  +S G  H LA++N G V+AWG+    +LG+      +E    L L  
Sbjct: 435 KKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGV------QENNKSLHLPT 488

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHY 112
           +    VSAG  HS A T   +  ++ G +    L +G  +D  D Y
Sbjct: 489 R----VSAGGLHSMALTDQGI-LYSWGSSKGGVLGIGFQRDNKDCY 529



 Score = 44.3 bits (103), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVL-ALSN 66
           IP FKN  I+ +S    H +A+S+ G  ++WG+N   QLGLG    Y   PQ +  AL  
Sbjct: 784 IPYFKN-KIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALET 842

Query: 67  KNIRQVSAGRSHSAAWT 83
           K I   +     SA  T
Sbjct: 843 KRIIMSTCSDRFSALLT 859



 Score = 41.2 bits (95), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 403 FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVV-ALNK 460
           F N++ +    ++C + H+  ++  G  Y++G+  Y +LG G    +  +P+++  AL  
Sbjct: 787 FKNKIIF----MSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALET 842

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             +   +C    +  + DKG+ ++ FG  + G LG
Sbjct: 843 KRIIMSTCSDRFSALLTDKGE-IWTFGTSDSGVLG 876


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA V+ +G LYT+G GD+GRLGHG + +  +P  V  ++  +V  VSCG +H
Sbjct: 525 CVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 582

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++  G+ V++FG G+ GKLG G+T
Sbjct: 583 TIALSKDGRTVWSFGGGDNGKLGHGDT 609



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       +VDIS+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V+ L   
Sbjct: 669 IEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVVGLDGV 728

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 729 AIQQISAGTSHSLAWTALP 747



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+   T+ G ++++G+GDYG+LGHG +   K P+ +   L    V  VS G  H+  +++
Sbjct: 479 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 538

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G++  +  P
Sbjct: 539 DGE-LYTWGEGDFGRLGHGDSNSRNIP 564



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 13/110 (11%)

Query: 402 TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV----- 456
           TFA+  Q  EA   C F    V++S+G +   G G YGRLG G + N    +++      
Sbjct: 411 TFAD-AQTIEAGQYCTF----VISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR 465

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           A+ KV     S G  HT+    +G+ V+++GDG+YGKLG GN+  +  P+
Sbjct: 466 AIKKVSSSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 512



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  ++ +G  +++FG GD G+LGHG T     P+ V AL  + +  V  G   
Sbjct: 576 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS 635

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
           ++ +   G+ VYA+G G    LG G+   T L+P
Sbjct: 636 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 666



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           + I  V  S G++ H LA +  G+VF+WG+    +LG GN    + P+L+   L  K + 
Sbjct: 465 RAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 524

Query: 71  QVSAGRSHSAA 81
            VSAG  HSAA
Sbjct: 525 CVSAGYRHSAA 535



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H  AVS  G+++ WG     +LG G+  +   P LV  +S  N+ +VS G 
Sbjct: 523 VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 580

Query: 77  SHSAA 81
           SH+ A
Sbjct: 581 SHTIA 585


>gi|340376957|ref|XP_003386997.1| PREDICTED: e3 ubiquitin-protein ligase HECTD3-like [Amphimedon
           queenslandica]
          Length = 619

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 16/181 (8%)

Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGEL------LSGAVPLLVRTPNGVADTG-YNRDRY 289
           W+ K L EG  D GG F D+++++  EL      +  ++PL +R+PN   D+    RD Y
Sbjct: 288 WECKFLQEGVIDQGGGFRDSLSDIAEELCPPSLDVDVSLPLFIRSPNQSQDSSNVYRDAY 347

Query: 290 ILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFT-DLEDND 348
             NP    S +    + F+G L G   R+++ L L L   +WK +V EPVT+T D    D
Sbjct: 348 TPNP----SCEQFAKYSFVGQLMGGTFRSQEILVLSLPQFIWKQLVGEPVTWTRDFVSVD 403

Query: 349 TLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQ 408
           +   + + +I  +  S + ++ F E++    F      G+  P++ GG+   +T+ +RL+
Sbjct: 404 SAEVKLIDSIETMEAS-IFDSTFAEVLN---FTTVLSNGKTVPLLPGGEDRYVTYEDRLE 459

Query: 409 Y 409
           Y
Sbjct: 460 Y 460


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ GF HSA V SNG L T+G G+ G+LGHG   N  +P+ V ++    V  V CG  HT
Sbjct: 637 ISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHT 696

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +C+   GK V+ +G  EYG+LGLG+T    TP
Sbjct: 697 ICLTKNGK-VFTWGTSEYGQLGLGDTQKNCTP 727



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           Q +P    +   ++   + CG KH+  +T NG ++T+G  +YG+LG G T     P  V 
Sbjct: 672 QPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVT 731

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           +L+K H+  ++CG  H   + +  + V  FG+G
Sbjct: 732 SLDKYHIIQIACGATHNAVLTNN-REVLVFGNG 763



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H A +T +G +YT G   +G+LGH    +   P+++ +L K    S+SCG NH 
Sbjct: 839 ISCGGRHMAFLTDSGKIYTSGKDPFGQLGHAAG-DQNRPKKIDSLLKTTFMSISCGENHN 897

Query: 474 VCIADKGKA 482
             + D  ++
Sbjct: 898 AALFDTTRS 906



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG   +A +T  G +YT+G+G    LGHG   +   P+ V  L    +  +SCG  H 
Sbjct: 789 LSCGHYSTAALTECGDVYTWGSGQ--ELGHGHGTSEAHPKLVETLRNQSIRQISCGGRHM 846

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
             + D GK +Y  G   +G+LG
Sbjct: 847 AFLTDSGK-IYTSGKDPFGQLG 867



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +  +  G +H + ++  G+VF WG +   QLGLG+      P LV +L   +I Q++ G 
Sbjct: 686 VTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGA 745

Query: 77  SHSAAWT 83
           +H+A  T
Sbjct: 746 THNAVLT 752



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 5/122 (4%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G S  G++    T     P+   +  +Y+   IACG  H+AV+T+N  +  FGNG     
Sbjct: 709 GTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNG----A 764

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGL 501
             G+     +P  V +L  +++E +SCG   T  + + G  VY +G G+    G G +  
Sbjct: 765 AMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGD-VYTWGSGQELGHGHGTSEA 823

Query: 502 KP 503
            P
Sbjct: 824 HP 825



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
            IV IS+G  H  AV + G++  WG   D QLG G+  N   P++V ++++  + QV  G
Sbjct: 633 EIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCG 692

Query: 76  RSHSAAWT 83
             H+   T
Sbjct: 693 EKHTICLT 700



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +P+ K ++I  +S G     A++  G V+ WG  S  +LG G+  +   P+LV  L N++
Sbjct: 778 VPSLKIMNIERLSCGHYSTAALTECGDVYTWG--SGQELGHGHGTSEAHPKLVETLRNQS 835

Query: 69  IRQVSAGRSHSAAWT 83
           IRQ+S G  H A  T
Sbjct: 836 IRQISCGGRHMAFLT 850


>gi|340373568|ref|XP_003385313.1| PREDICTED: e3 ubiquitin-protein ligase HECTD3-like [Amphimedon
           queenslandica]
          Length = 816

 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 16/181 (8%)

Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGEL------LSGAVPLLVRTPNGVADTG-YNRDRY 289
           W+ K L EG  D GG F D+++++  EL      +  ++PL +R+PN   D+    RD Y
Sbjct: 485 WECKFLQEGVIDQGGGFRDSLSDIAEELCPPSLDVDVSLPLFIRSPNQSQDSSNVYRDAY 544

Query: 290 ILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFT-DLEDND 348
             NP    S +    + F+G L G   R+++ L L L   +WK +V EPVT+T D    D
Sbjct: 545 TPNP----SCEQFAKYSFVGQLMGGTFRSQEILVLSLPQFIWKQLVGEPVTWTRDFVSVD 600

Query: 349 TLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQ 408
           +   + + +I  +  S + ++ F E++    F      G+  P++ GG+   +T+ +RL+
Sbjct: 601 SAEVKLIDSIETMEAS-IFDSTFAEVLN---FTTVLSNGKTVPLLPGGEDRYVTYEDRLE 656

Query: 409 Y 409
           Y
Sbjct: 657 Y 657


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 58/92 (63%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A +T +G L+TFG+G +G+LGHG+T N  +P RV+ L    V  ++CG +HT
Sbjct: 246 ISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHT 305

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  A     VYAFG   +G+LG G      +P
Sbjct: 306 LAFAPSSGGVYAFGCNSHGQLGTGVLSADKSP 337



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 9/89 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGH---GTTMNWKVPERVVALNKVHVESVSCGL 470
           I CG +HS  +  +G +YT G+   G+LGH   G T     PE V AL+   +  VSCG 
Sbjct: 38  IVCGGQHSVFLLHDGSVYTCGSNSCGQLGHNKPGIT-----PEFVGALDTQKITLVSCGQ 92

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            H++ + ++G+ V+A+G GE G+LGLG T
Sbjct: 93  AHSLAVNEQGQ-VFAWGAGEEGQLGLGTT 120



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 1/80 (1%)

Query: 3   GTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLV 61
           G +   + A     I  +S G  H LAV+  GQVFAWG   + QLGLG  +   R P+L+
Sbjct: 71  GITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLI 130

Query: 62  LALSNKNIRQVSAGRSHSAA 81
             L +  I QV  G  H  A
Sbjct: 131 KRLCDHRIAQVMCGNQHCIA 150



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           HI   ++  +V IS G EH  A++  G +F +G+ S  QLG G+  N   P+ VL L   
Sbjct: 234 HIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGT 293

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 294 EVSQITCGRHHTLAF 308



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I  G  HS  ++ +G ++ +G    G+LG     +  VP  +  L    V  +SCG  
Sbjct: 192 AKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEE 251

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +   G  ++ FGDG +G+LG G+T  +  P+
Sbjct: 252 HTAALTKDG-GLFTFGDGSWGQLGHGSTANELLPR 285



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           ++CG  HS  V   G ++ +G G+ G+LG GTT    ++P  +  L    +  V CG  H
Sbjct: 88  VSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQH 147

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKPTP 505
            + ++  G+ ++ +G    G+LGLG    + L P P
Sbjct: 148 CIALSKDGQ-LFTWGQNTSGQLGLGKGEPSKLFPQP 182



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + +   I +  I+ G +H  A+S +G VF WG N   QLGL +  +   P  +  L ++ 
Sbjct: 183 LKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQK 242

Query: 69  IRQVSAGRSHSAAWT 83
           +  +S G  H+AA T
Sbjct: 243 VVHISCGEEHTAALT 257



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALS 65
           R I    +  I  +  G +H +A+S  GQ+F WG N+  QLGLG  + +   PQ + +L+
Sbjct: 128 RLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLA 187

Query: 66  NKNIRQVSAGRSHSAA 81
              + +++AG  HS A
Sbjct: 188 GIPLAKITAGGDHSFA 203



 Score = 45.1 bits (105), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 2/95 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGL 470
           A + CG +H   ++ +G L+T+G    G+LG G     K+ P+ + +L  + +  ++ G 
Sbjct: 139 AQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGG 198

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +H+  ++  G AV+ +G  + G+LGL +   +  P
Sbjct: 199 DHSFALSLSG-AVFGWGKNKAGQLGLNDIQDRAVP 232



 Score = 38.1 bits (87), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 18/165 (10%)

Query: 305 FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
           F  +GI+ G+AI     + L     ++K ++    T  DL++     A+SL+ + D    
Sbjct: 785 FHLIGIICGLAIYNSTVVDLHFPLALYKKLLDVSPTLEDLKELSPTEARSLQQLMDYDRE 844

Query: 365 GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSA-- 422
            V EA            G +    +  +V GG+S+ +   NR ++ EA +   F+ SA  
Sbjct: 845 DVEEAFLLTFAITRENYGIT---EVKELVPGGESIGVDKNNRKEFVEAYLRYIFRDSASE 901

Query: 423 --VVTSNGYLYTFGNGDYGRLGH----------GTTMNWKVPERV 455
                S G+L   G G+   L             +  NW+V E++
Sbjct: 902 QYTAFSTGFLKVCG-GEILSLFQPCELMAMVVGNSNYNWEVMEKL 945


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 64/94 (68%), Gaps = 2/94 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ G++HSA VT +G LYT+G+G++GRLGH  T +   P +V ++  V +  V+CG +H
Sbjct: 539 CVSAGYRHSAAVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGL--VACGGSH 596

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           T+ ++  GK +++FG GE GKLG G+T  +  P+
Sbjct: 597 TLAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPK 630



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALS 65
           R +   ++  +VDI+ G  HV+A+++  +V+AWGNN+  Q G G+ Q     P+ V+ L 
Sbjct: 681 RLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRPKRVIGLD 740

Query: 66  NKNIRQVSAGRSHSAAWTAPP 86
             ++ QVSAG SHS AWTA P
Sbjct: 741 GVSVHQVSAGTSHSVAWTALP 761



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           HS  +T+ G +Y++G+GDYG+LGHGT    K+P+ V    + KV V+ VS G  H+  + 
Sbjct: 493 HSLALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKV-VKCVSAGYRHSAAVT 551

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + G+ +Y +GDGE+G+LG   T  K  P
Sbjct: 552 EDGE-LYTWGDGEFGRLGHDYTSSKNFP 578



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 9/107 (8%)

Query: 403 FANRLQYYEAA--IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           F  ++Q  E+   +ACG  H+  V+ +G  +++FG G+ G+LGHG T     P+ + ALN
Sbjct: 577 FPTKVQSIESVGLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALN 636

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
            +++  V+CG   ++ +   G+ +YA+G G    LG G+   T L+P
Sbjct: 637 GLYIRKVACGSQSSLAVTSSGQ-LYAWGCGAI--LGCGSAEYTALRP 680



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 15/137 (10%)

Query: 379 CFEGASWTGRIT-PIVTGGQSVPLT-----FANRLQYYEAAIACGFKHSAVVTSNGYLYT 432
           C E   W    T  +  GGQ    T          Q  EA   C F    ++ S+G +  
Sbjct: 396 CGEVYVWGSNCTHQLAEGGQEKITTPKYSAVFTDCQQVEAGQFCTF----LIYSDGTVGA 451

Query: 433 FGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN---HTVCIADKGKAVYAFGDG 489
            G G YGRLG G + N  VP++ +  +K +V+ +S       H++ +   G+ VY++GDG
Sbjct: 452 CGKGSYGRLGLGDSNNCSVPKKPL-FDKKYVKKISSSKGSDGHSLALTTTGE-VYSWGDG 509

Query: 490 EYGKLGLGNTGLKPTPQ 506
           +YGKLG G    +  P+
Sbjct: 510 DYGKLGHGTHSTQKIPK 526



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 10  PAFKNIHIVDISV--GTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LS 65
           P F   ++  IS   G++ H LA++ TG+V++WG+    +LG G     + P+LV   L 
Sbjct: 474 PLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLV 533

Query: 66  NKNIRQVSAGRSHSAAWT 83
            K ++ VSAG  HSAA T
Sbjct: 534 GKVVKCVSAGYRHSAAVT 551



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           IACG  H   +T    +Y +GN   G+ G G   +    P+RV+ L+ V V  VS G +H
Sbjct: 694 IACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRPKRVIGLDGVSVHQVSAGTSH 753

Query: 473 TV 474
           +V
Sbjct: 754 SV 755


>gi|7630003|emb|CAB88345.1| putative protein [Arabidopsis thaliana]
          Length = 487

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 84/160 (52%), Gaps = 6/160 (3%)

Query: 341 FTDLEDNDTLYAQSLRAIRDIHL-SGVTEANFPEIIPLECFEG-ASWTGRITPIVTGGQS 398
           FT++ D   ++         + L S +   + P +IP  C E   S   R   +  GG +
Sbjct: 241 FTEVSDLGQIWGWGYGGEGQLGLGSRIKMVSSPHLIP--CLESIGSGKERSFILHQGGTT 298

Query: 399 VPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
                A+R    Y  AI+CG +HSA +T  G L TFG G YG+ GHG T +   P  V  
Sbjct: 299 TTSAQASREPGQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSE 358

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           +  V +ESV+ GL HT+CI+  GK VYAFG  ++G+LG G
Sbjct: 359 VKSVRMESVAAGLWHTICISSDGK-VYAFGGNQFGQLGTG 397



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           +  A++CG +HSAV+  +G L  +G   YG+LG G T +  +P + V L+   +  V+CG
Sbjct: 417 HAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQ-VQLDGCRLRKVACG 475

Query: 470 LNHTVCIAD 478
             HT+ + D
Sbjct: 476 WWHTLLLGD 484



 Score = 42.4 bits (98), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           +   K++ +  ++ G  H + +S+ G+V+A+G N   QLG G       P+L+    L  
Sbjct: 356 VSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEG 415

Query: 67  KNIRQVSAGRSHSA 80
           K+ + VS G  HSA
Sbjct: 416 KHAKAVSCGARHSA 429


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA VT  G++Y +G  DYG LG G + + ++P+R+   + + V  VSCG  HT
Sbjct: 228 VACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHT 287

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V +A  G   YAFG GEYG+LGLG+T  +  P 
Sbjct: 288 VVVAKSGD-CYAFGRGEYGRLGLGDTKSRTRPH 319



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 5/107 (4%)

Query: 396 GQSVPLTFANRLQYYEAA----IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV 451
           GQS       RL+Y++      ++CG  H+ VV  +G  Y FG G+YGRLG G T +   
Sbjct: 258 GQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTR 317

Query: 452 PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           P  V AL    V   +CG +HT+ +   G A Y  G  ++G+LGL +
Sbjct: 318 PHLVKALKGKTVIQAACGGSHTLFVTSDGTA-YVAGRPDHGRLGLAD 363



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT----------MNWKVPERVVALNKVHV 463
           ++CG  H+A +TS G +Y +G GD G+LG G+           M    P  + A N   V
Sbjct: 166 VSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKV 225

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             V+CG  H+  + ++G  VY +G  +YG LG+G +  +  P+
Sbjct: 226 VQVACGAFHSAAVTEQGH-VYVWGKEDYGMLGVGQSSDQQIPK 267



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGL 470
           A++CG +H+  +TS+G +Y++G G  G+LGHG       P+++      ++ V+ +SCG 
Sbjct: 53  AVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGG 112

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGL 496
            H+  +   G  +Y +G+  +G+LGL
Sbjct: 113 CHSAAVTKDG-TLYVWGESHWGQLGL 137



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 40/73 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + +  F +I ++ +S G  H + V+ +G  +A+G     +LGLG+  +   P LV AL  
Sbjct: 267 KRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKG 326

Query: 67  KNIRQVSAGRSHS 79
           K + Q + G SH+
Sbjct: 327 KTVIQAACGGSHT 339



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK--NIRQVSA 74
           IV +S G+ H +A++++G V++WG  S  QLG G+     EPQ +     +   +  +S 
Sbjct: 51  IVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISC 110

Query: 75  GRSHSAAWT 83
           G  HSAA T
Sbjct: 111 GGCHSAAVT 119



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 10/77 (12%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ----------INYREPQLVLALSN 66
           IV +S G  H  A+++ G+V+ WG     QLG+G+           +    P L+ A + 
Sbjct: 163 IVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNG 222

Query: 67  KNIRQVSAGRSHSAAWT 83
           + + QV+ G  HSAA T
Sbjct: 223 EKVVQVACGAFHSAAVT 239



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 34/71 (47%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + AF    +V ++ G  H  AV+  G V+ WG      LG+G   + + P+ +    +  
Sbjct: 217 LKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIP 276

Query: 69  IRQVSAGRSHS 79
           + +VS G  H+
Sbjct: 277 VLRVSCGGWHT 287



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           ACG  H+  VTS+G  Y  G  D+GRLG        VP R + L  + V   S G  H+V
Sbjct: 333 ACGGSHTLFVTSDGTAYVAGRPDHGRLGLADMKALGVPTR-LDLGPIPVRQFSAGGAHSV 391

Query: 475 CIADKGKAVYA 485
            +    + +++
Sbjct: 392 ALMHSSRPIFS 402



 Score = 38.1 bits (87), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 11/85 (12%)

Query: 432 TFGNGDYGRLGHGTTMN----------WKVPERVVALNKVHVESVSCGLNHTVCIADKGK 481
            FG  D G+LG G                 P+++  L    + +VSCG  HT+ +   G 
Sbjct: 10  AFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSG- 68

Query: 482 AVYAFGDGEYGKLGLGNTGLKPTPQ 506
           AVY++G G  G+LG G+  +   PQ
Sbjct: 69  AVYSWGWGSMGQLGHGDLKIINEPQ 93


>gi|123446784|ref|XP_001312139.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121893976|gb|EAX99209.1| hypothetical protein TVAG_236540 [Trichomonas vaginalis G3]
          Length = 2978

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 13/218 (5%)

Query: 194  FGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVF 253
            F  S  +  +      +   +  Q+  QV       L+  S  W V L+GEGA DAGG  
Sbjct: 2598 FNRSRAILHMNRPDHPSASTLLRQLIEQVPLRLIDSLKRDSVPWHVDLIGEGALDAGGPS 2657

Query: 254  DDTITEMCGELLSGAVPLLVRTPNG--VADTGYNRDRYILNPDLSESLQSLMHFKFLGIL 311
             D  ++MC EL   +  L + +PN   +     N DR++ NP    S   L+  ++ G+L
Sbjct: 2658 RDIFSQMCIELFHPSTGLFISSPNTQYLPRNAQNVDRFVPNP----SCTDLVQLEYAGVL 2713

Query: 312  FGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANF 371
              +A  ++ P P   +  VW+ +    +T  D+   D+ +A S++A ++     +    +
Sbjct: 2714 MSIAYVSRMPQPFRFAEFVWRFLTGHQLTIEDIYSVDSAFASSIKAFKENPAKTLLAHEY 2773

Query: 372  PEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQY 409
                    F   +  G++  ++  G SV +T  N  +Y
Sbjct: 2774 S-------FTVVNVAGQVKELIPYGSSVKVTMENVQKY 2804


>gi|297816690|ref|XP_002876228.1| hypothetical protein ARALYDRAFT_485777 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322066|gb|EFH52487.1| hypothetical protein ARALYDRAFT_485777 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 487

 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           Y  AI+CG +HSA +T  G L TFG G YG+ GHG T +   P  V ++  V +ESV+ G
Sbjct: 311 YIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSSMKSVRMESVAAG 370

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           L HT+CI+  GK VYAFG  ++G+LG G 
Sbjct: 371 LWHTICISSDGK-VYAFGGNQFGQLGTGT 398



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)

Query: 388 RITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM 447
            I P + GGQ++   +A        A++CG +HSAV+  +G L  +G   YG+LG G T 
Sbjct: 402 EILPRLLGGQNLEGKYAK-------AVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTN 454

Query: 448 NWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           +  +P + V L+   +  V+CG  HT+ +AD
Sbjct: 455 DRSIPTQ-VQLDGCRLRKVACGWWHTLLLAD 484



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + + K++ +  ++ G  H + +S+ G+V+A+G N   QLG G       P+L+    L  
Sbjct: 356 VSSMKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLGGQNLEG 415

Query: 67  KNIRQVSAGRSHSA 80
           K  + VS G  HSA
Sbjct: 416 KYAKAVSCGARHSA 429



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 6/65 (9%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLA-VSNTGQVFAWGNNSDAQLGLGNQINY-REPQLV 61
           T GRH  A      V+ S   +HV A VS+ GQ++ WG   + QLGLG++I     P L+
Sbjct: 221 TGGRHTLALS----VEDSFEDDHVFAEVSDIGQIWGWGYGGEGQLGLGSRIKMVSSPHLI 276

Query: 62  LALSN 66
             L +
Sbjct: 277 PCLES 281


>gi|218196915|gb|EEC79342.1| hypothetical protein OsI_20201 [Oryza sativa Indica Group]
          Length = 484

 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 2/131 (1%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C + A ++   T IV G +++  T  +R      AIACG +HSAVVT +G L TFG 
Sbjct: 275 PIPCVQSAFYSKDRTGIVMGSRTLEGT-NDRAATCVKAIACGGRHSAVVTDSGTLLTFGW 333

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G T +   P  V A+  V ++ V+ GL HTVC +  G  VY+FG  ++G+LG
Sbjct: 334 GLYGQCGQGNTDDILSPTCVSAIMGVKIQRVAAGLWHTVCTSADGD-VYSFGGNQFGQLG 392

Query: 496 LGNTGLKPTPQ 506
            G+   +  P+
Sbjct: 393 TGSDQAEIVPK 403



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           +A G  H+   +++G +Y+FG   +G+LG G+     VP+ V A  L   H   VSCG  
Sbjct: 364 VAAGLWHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIVPKLVEASKLENKHARGVSCGAR 423

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H+  I DKG  V+ +G  +YG+LGLG++  +  P
Sbjct: 424 HSAVITDKGD-VFCWGWNKYGQLGLGDSTDRNVP 456



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 6/81 (7%)

Query: 401 LTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER--VVA 457
           L  A++L+   A  ++CG +HSAV+T  G ++ +G   YG+LG G + +  VP +  V A
Sbjct: 404 LVEASKLENKHARGVSCGARHSAVITDKGDVFCWGWNKYGQLGLGDSTDRNVPCQVPVEA 463

Query: 458 LNKVHVESVSCGLNHTVCIAD 478
            N ++   VSCG  HT+ +A+
Sbjct: 464 YNPLN---VSCGWWHTLVLAE 481



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + A   + I  ++ G  H +  S  G V+++G N   QLG G+      P+LV A  L N
Sbjct: 353 VSAIMGVKIQRVAAGLWHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIVPKLVEASKLEN 412

Query: 67  KNIRQVSAGRSHSA 80
           K+ R VS G  HSA
Sbjct: 413 KHARGVSCGARHSA 426



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
            + IV+++ G  H L +S+ GQV+ WG   + QLGLG++I
Sbjct: 228 GVKIVEVAAGGRHTLVLSDFGQVWGWGYGGEGQLGLGSRI 267



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            +N H   +S G  H   +++ G VF WG N   QLGLG+  +   P  V  +   N   
Sbjct: 410 LENKHARGVSCGARHSAVITDKGDVFCWGWNKYGQLGLGDSTDRNVPCQV-PVEAYNPLN 468

Query: 72  VSAGRSHS 79
           VS G  H+
Sbjct: 469 VSCGWWHT 476


>gi|222631832|gb|EEE63964.1| hypothetical protein OsJ_18789 [Oryza sativa Japonica Group]
          Length = 479

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 2/131 (1%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C + A ++   T IV G +++  T  +R      AIACG +HSAVVT +G L TFG 
Sbjct: 270 PIPCVQSAFYSKDRTGIVMGSRTLEGT-NDRAATCVKAIACGGRHSAVVTDSGTLLTFGW 328

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G T +   P  V A+  V ++ V+ GL HTVC +  G  VY+FG  ++G+LG
Sbjct: 329 GLYGQCGQGNTDDILSPTCVSAIMGVKIQRVAAGLWHTVCTSADGD-VYSFGGNQFGQLG 387

Query: 496 LGNTGLKPTPQ 506
            G+   +  P+
Sbjct: 388 TGSDQAEIVPK 398



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           +A G  H+   +++G +Y+FG   +G+LG G+     VP+ V A  L   H   VSCG  
Sbjct: 359 VAAGLWHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIVPKLVEASKLENNHARGVSCGAR 418

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H+  I DKG  V+ +G  +YG+LGLG++  +  P
Sbjct: 419 HSAVITDKGD-VFCWGWNKYGQLGLGDSTDRNVP 451



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 6/81 (7%)

Query: 401 LTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER--VVA 457
           L  A++L+   A  ++CG +HSAV+T  G ++ +G   YG+LG G + +  VP +  V A
Sbjct: 399 LVEASKLENNHARGVSCGARHSAVITDKGDVFCWGWNKYGQLGLGDSTDRNVPCQVPVEA 458

Query: 458 LNKVHVESVSCGLNHTVCIAD 478
            N ++   VSCG  HT+ +A+
Sbjct: 459 YNPLN---VSCGWWHTLVLAE 476



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + A   + I  ++ G  H +  S  G V+++G N   QLG G+      P+LV A  L N
Sbjct: 348 VSAIMGVKIQRVAAGLWHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIVPKLVEASKLEN 407

Query: 67  KNIRQVSAGRSHSA 80
            + R VS G  HSA
Sbjct: 408 NHARGVSCGARHSA 421



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
            + IV+++ G  H L +S+ GQV+ WG   + QLGLG++I
Sbjct: 223 GVKIVEVAAGGRHTLVLSDFGQVWGWGYGGEGQLGLGSRI 262



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            +N H   +S G  H   +++ G VF WG N   QLGLG+  +   P  V  +   N   
Sbjct: 405 LENNHARGVSCGARHSAVITDKGDVFCWGWNKYGQLGLGDSTDRNVPCQV-PVEAYNPLN 463

Query: 72  VSAGRSHS 79
           VS G  H+
Sbjct: 464 VSCGWWHT 471


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G+ HSA + SNG L T+G G+ G+LGHG  +N  +P+ V  +    V  V CG  HT
Sbjct: 684 VSIGYYHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHT 743

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +C+   GK V+ +G  EYG+LGLG+T    TP
Sbjct: 744 ICLTKNGK-VFTWGTSEYGQLGLGDTQKNCTP 774



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
            Q++P        ++   + CG KH+  +T NG ++T+G  +YG+LG G T     P  V
Sbjct: 718 NQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLV 777

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
            +L K ++  ++CG  H   + +  + V  FG+G
Sbjct: 778 TSLEKYNIIQIACGSTHCAVLTN-AREVLVFGNG 810



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG   +A +T  G +YT+G+G    LGHGT  +   P+ V  L    +  +SCG  H 
Sbjct: 836 LSCGHYSTAALTECGDVYTWGSGQ--ELGHGTNQSELHPKLVDGLRSQSIRQISCGGRHM 893

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
             + D GK +Y  G   +G+LG
Sbjct: 894 AFLTDSGK-IYTCGKDPFGQLG 914



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +  +  G +H + ++  G+VF WG +   QLGLG+      P LV +L   NI Q++ G 
Sbjct: 733 VTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGS 792

Query: 77  SHSAAWT 83
           +H A  T
Sbjct: 793 THCAVLT 799



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H A +T +G +YT G   +G+LGH      K P+++ +L K    SVSCG NH 
Sbjct: 886 ISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQGDQNK-PKKIDSLLKTTFISVSCGENHN 944

Query: 474 VCIADKGKA 482
             + D  ++
Sbjct: 945 ASLFDTTRS 953



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 5/122 (4%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G S  G++    T     P+   +  +Y    IACG  H AV+T+   +  FGNG    +
Sbjct: 756 GTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNG--AAM 813

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGL 501
           G    ++  VP  V AL  +++E +SCG   T  + + G  VY +G G+    G   + L
Sbjct: 814 GSANIIS--VPMMVPALKHLNIERLSCGHYSTAALTECGD-VYTWGSGQELGHGTNQSEL 870

Query: 502 KP 503
            P
Sbjct: 871 HP 872



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +PA K+++I  +S G     A++  G V+ WG  S  +LG G   +   P+LV  L +++
Sbjct: 825 VPALKHLNIERLSCGHYSTAALTECGDVYTWG--SGQELGHGTNQSELHPKLVDGLRSQS 882

Query: 69  IRQVSAGRSHSAAWT 83
           IRQ+S G  H A  T
Sbjct: 883 IRQISCGGRHMAFLT 897



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 37/68 (54%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
            +V +S+G  H  A+ + G++  WG   D QLG G+ +N   P++V  +++  + QV  G
Sbjct: 680 EVVLVSIGYYHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCG 739

Query: 76  RSHSAAWT 83
             H+   T
Sbjct: 740 EKHTICLT 747


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 599 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 658

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + D G+ V+++GDG+YGKLG G +    TP+
Sbjct: 659 QTLAVTDNGQ-VWSWGDGDYGKLGRGGSDGCKTPK 692



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 624 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRG 683

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 684 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 736



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 549 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 608

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 609 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 637



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 694 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 753

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 754 VIDVAAGSTHCLALT 768



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV++ GQV++WG+    +LG G     + P+L+  L +
Sbjct: 640 VAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 699

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 700 LDVVKVRCGSQFSIALT 716



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 705 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 764

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 765 LALTEDSE-VHSWGSND 780



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 534 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 593

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 594 KHVVHIACGSTYSAAITA 611



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 746 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 805

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 806 IVGIACGPAQSFAWSS 821


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 14/124 (11%)

Query: 382 GASWTGRITPIVTGGQSVP---LTFANRL------QYYEAAIACGFKHSAVVTSNGYLYT 432
           G ++ G++    T  +SVP    +  NR+       YY   +AC    S       YLYT
Sbjct: 545 GYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACEEDGSG----QQYLYT 600

Query: 433 FGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYG 492
           FG  DYG+LGH  +++ KVP+ V A+   HV SV+CG  HT+ +   GKA +AFG  +YG
Sbjct: 601 FGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTATGKA-FAFGKNDYG 659

Query: 493 KLGL 496
           +LG+
Sbjct: 660 QLGI 663



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLN 471
           ++ACG  H+ VVT+ G  + FG  DYG+LG  +  N  VP +V A L K     + CG  
Sbjct: 633 SVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYY 692

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           HT+ +   G  ++AFG  +YG+LGLG      T
Sbjct: 693 HTIVLC-SGAHLFAFGRNDYGQLGLGRANASST 724



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 14/122 (11%)

Query: 397 QSVPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-----TTMNWK 450
           Q VP+     L+ +E   I CG+ H+ V+ S  +L+ FG  DYG+LG G     +T N +
Sbjct: 669 QLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRANASSTANLQ 728

Query: 451 VPER-------VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
           + ++       +  L    +   +CG  HTV ++D G  +Y FG   +G+LG G+T  + 
Sbjct: 729 LQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNG-VMYVFGRNNHGQLGTGDTNERV 787

Query: 504 TP 505
            P
Sbjct: 788 YP 789



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
           G +H+ +VT +G   T G    G+LGHG T +  VP+ V +L    V  VSC   HTV  
Sbjct: 528 GCEHTILVTMDGRAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMA 587

Query: 477 ADKG----KAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            ++     + +Y FG  +YG+LG  ++  +  PQ
Sbjct: 588 CEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQ 621



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLALS 65
           +H+ A  + H+V ++ G  H + V+ TG+ FA+G N   QLG+ +  N   P Q+   L 
Sbjct: 621 QHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLE 680

Query: 66  NKNIRQVSAGRSHS 79
                ++  G  H+
Sbjct: 681 KHECLEIRCGYYHT 694



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           +++ G   YG LGHG T + K  ER+ +L +  +  +  G  HT+ +   GK V   G  
Sbjct: 435 VWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGK-VLTCGYN 493

Query: 490 EYGKLGLGNTG 500
           + G+ G G T 
Sbjct: 494 DNGQCGQGGTA 504



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 31/63 (49%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ACG  H+  V+ NG +Y FG  ++G+LG G T     P  +       V  V+ G  HT
Sbjct: 751 FACGCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALVAAGFYHT 810

Query: 474 VCI 476
           V +
Sbjct: 811 VVL 813



 Score = 38.5 bits (88), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
           A   +H  +   G EH + V+  G+    G N   QLG GN  +   P++V +L N+ +R
Sbjct: 519 AISQVHAYN---GCEHTILVTMDGRAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVR 575

Query: 71  QVSAGRSHS 79
            VS    H+
Sbjct: 576 LVSCSYYHT 584


>gi|334185962|ref|NP_190951.2| Regulator of chromosome condensation (RCC1) family protein
           [Arabidopsis thaliana]
 gi|332645627|gb|AEE79148.1| Regulator of chromosome condensation (RCC1) family protein
           [Arabidopsis thaliana]
          Length = 472

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 72/128 (56%), Gaps = 5/128 (3%)

Query: 372 PEIIPLECFEG-ASWTGRITPIVTGGQSVPLTFANRL-QYYEAAIACGFKHSAVVTSNGY 429
           P +IP  C E   S   R   +  GG +     A+R    Y  AI+CG +HSA +T  G 
Sbjct: 258 PHLIP--CLESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDAGG 315

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           L TFG G YG+ GHG T +   P  V  +  V +ESV+ GL HT+CI+  GK VYAFG  
Sbjct: 316 LITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGK-VYAFGGN 374

Query: 490 EYGKLGLG 497
           ++G+LG G
Sbjct: 375 QFGQLGTG 382



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           +  A++CG +HSAV+  +G L  +G   YG+LG G T +  +P + V L+   +  V+CG
Sbjct: 402 HAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQ-VQLDGCRLRKVACG 460

Query: 470 LNHTVCIAD 478
             HT+ + D
Sbjct: 461 WWHTLLLGD 469



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSN 66
            + I  ++ G  H LA+S+ GQ++ WG   + QLGLG++I     P L+  L +
Sbjct: 213 GVRITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLES 266



 Score = 42.4 bits (98), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           +   K++ +  ++ G  H + +S+ G+V+A+G N   QLG G       P+L+    L  
Sbjct: 341 VSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEG 400

Query: 67  KNIRQVSAGRSHSA 80
           K+ + VS G  HSA
Sbjct: 401 KHAKAVSCGARHSA 414


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 61/93 (65%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG+ H+AVVT +G +YTFG  DYG+LG G  M+   P RV +L ++ +  V+CG  HT
Sbjct: 285 LSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHT 344

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + ++D GK V+ FG   +G+LGL  +    +PQ
Sbjct: 345 LVLSDDGK-VFPFGRNNHGQLGLETSVDCLSPQ 376



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + +   + I  ++ G  H L +S+ G+VF +G N+  QLGL   ++   PQL+  L NK 
Sbjct: 326 VESLARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKT 385

Query: 69  IRQVSAGRSHSAAWTAPPLPPHTPGHTP 96
           + +V+AG  HS     P     T G TP
Sbjct: 386 VTKVAAGFYHSVCLVGP-----TEGETP 408



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 3/88 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVA-LNKVHVESVSCGL 470
           A+ACG  ++     +G +  FG  D+G+LG  +T      P R+ A L+++ V  +SCG 
Sbjct: 230 AVACGQHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGY 289

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           +HT  + + G AVY FG  +YG+LGLG+
Sbjct: 290 HHTAVVTEDG-AVYTFGRNDYGQLGLGH 316



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGL 470
           A + C + H+A+V  NG LY  G  DYG+LG G   N + VP  V    +  V +V+CG 
Sbjct: 176 ADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQ 235

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           ++T+     G  V AFG  ++G+LGL +T  +P  Q
Sbjct: 236 HYTIASLRDG-GVVAFGKNDHGQLGLDSTS-EPVSQ 269



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
           G +H A + +NG LYT G    G+LG G++        V  L    V  V C   HT  +
Sbjct: 129 GSEHLAALHANGNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIV 188

Query: 477 ADKGKAVYAFGDGEYGKLGLG---NTGLKPTP 505
            D G  +YA G  +YG+LGLG   N  L P P
Sbjct: 189 MDNGD-LYACGCNDYGQLGLGDHRNGELVPRP 219



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           +S G  H   V+  G V+ +G N   QLGLG++++   P  V +L+   I QV+ G  H+
Sbjct: 285 LSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHT 344



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH---VESVSCGLNHTVCIADKGKAVYAF 486
           +Y+FG   YG L  G T +   P RV   N  H   V  V+CG   T  + + G  VY  
Sbjct: 33  VYSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGD-VYTC 91

Query: 487 GDGEYGKLGLGNTGLKPT 504
           G  + G+  +G T   PT
Sbjct: 92  GYNDSGQCAIGTTERVPT 109



 Score = 38.9 bits (89), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 29/58 (50%)

Query: 23  GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSA 80
           G+EH+ A+   G ++  G N   QLGLG+     E  LV  L+ K +  V     H+A
Sbjct: 129 GSEHLAALHANGNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTA 186


>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 658

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 59/87 (67%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            I+ G++HSA VT +G LYT+G GDYGRLGHG + +  VP  V  ++  +V  V CG +H
Sbjct: 517 CISAGYRHSACVTDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDVS--NVGKVVCGSSH 574

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++   + V++FG G+ GKLG G+T
Sbjct: 575 TIAVSQDSRTVWSFGGGDNGKLGHGDT 601



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 59/88 (67%), Gaps = 4/88 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV--VALNKVHVESVSCGLNHTVCIA 477
           H+  +TS G ++++G+GDYG+LGHG T+  K P+ +  V + KV V  +S G  H+ C+ 
Sbjct: 471 HTLALTSEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKV-VVCISAGYRHSACVT 529

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           D G+ +Y +G+G+YG+LG G++  +  P
Sbjct: 530 DDGQ-LYTWGEGDYGRLGHGDSNSRNVP 556



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 8/110 (7%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           + ++FA   Q  EA   C F    V++S+G +   G G YGRLG G + N    +++   
Sbjct: 401 MAISFAES-QQIEAGQYCTF----VISSDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFD 455

Query: 459 NKV--HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           N +   + S      HT+ +  +G+ V+++GDG+YGKLG GNT  +  P+
Sbjct: 456 NSIITRISSSKGSDGHTLALTSEGQ-VFSWGDGDYGKLGHGNTLTQKYPK 504



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 4/76 (5%)

Query: 12  FKNIHIVDISV--GTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNK 67
           F N  I  IS   G++ H LA+++ GQVF+WG+    +LG GN +  + P+++L  L  K
Sbjct: 454 FDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGK 513

Query: 68  NIRQVSAGRSHSAAWT 83
            +  +SAG  HSA  T
Sbjct: 514 VVVCISAGYRHSACVT 529



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           + CG  H+  V+ +   +++FG GD G+LGHG T     P+ + +L  + ++ V CG   
Sbjct: 568 VVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQS 627

Query: 473 TVCIADKGKAVYAF 486
           ++ +   G+  + F
Sbjct: 628 SLALTSTGQVRFIF 641



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V IS G  H   V++ GQ++ WG     +LG G+  +   P LV  +S  N+ +V  G 
Sbjct: 515 VVCISAGYRHSACVTDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDVS--NVGKVVCGS 572

Query: 77  SHSAA 81
           SH+ A
Sbjct: 573 SHTIA 577


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN- 471
             IACG  HSA +T+ G +YT+G G YGRLGHG + +  +P+ V AL+   V  V+CG   
Sbjct: 4094 CIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGD 4153

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
              T+CI D    V+++GDG+YGKLG G +
Sbjct: 4154 AQTLCITDDDN-VWSWGDGDYGKLGRGGS 4181



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 3/89 (3%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN- 471
            +IACG  HSA VT+ G+LYT+G G+YGRLGHG      VP+ V AL    V  V+CG   
Sbjct: 3200 SIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRD 3259

Query: 472  -HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
              T+ +   GK V+++GDG++GKLG G +
Sbjct: 3260 AQTLALTACGK-VFSWGDGDFGKLGRGGS 3287



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 90/164 (54%), Gaps = 12/164 (7%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIP-----LECFEGASWTGRITPIVTGGQSVPLT-- 402
            +++ +L A+R +H++G ++  F  I+        C EG +  GR+    +   S P    
Sbjct: 3082 VFSPALSALRPVHIAGGSKTLF--IVSHDGKLFACGEGTN--GRLGLGHSNNVSTPRANP 3137

Query: 403  FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
            + + +     A+  G KH+  +T++G +Y++G G+ G+LGHG  +  + P  + +L    
Sbjct: 3138 YLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAGER 3197

Query: 463  VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V S++CG  H+ C+  +G  +Y +G GEYG+LG G+  ++  P+
Sbjct: 3198 VISIACGSAHSACVTARGH-LYTWGLGEYGRLGHGDDNIQLVPK 3240



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 67/111 (60%), Gaps = 3/111 (2%)

Query: 398  SVPLTFANRLQYYEAAIAC--GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
            S P   A+    +   +AC  G KH   ++++G +Y++G G+ G+LGHG  +++  P+ +
Sbjct: 4025 SQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLI 4084

Query: 456  VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             AL+ + V  ++CG  H+ C+  +G+ +Y +G G YG+LG G++  +  P+
Sbjct: 4085 TALSGLEVVCIACGGAHSACLTARGR-IYTWGKGRYGRLGHGDSEDQLIPK 4134



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +   G +YT+G GDY RLGHG+  + + P RV  +    + S++ G  H 
Sbjct: 4201 VECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHC 4260

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNT 499
            V   D G+ VY +GD + G+LG G T
Sbjct: 4261 VACTDTGE-VYTWGDNDEGQLGDGTT 4285



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 1/112 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G ++P+            + CG + S  +T +G ++T+G GDY RLGHG   + + P 
Sbjct: 3287 SDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRPT 3346

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             V AL    V  V+ G  H + +  + + V+A+GD ++G+ G G T +   P
Sbjct: 3347 LVEALRGRRVIHVAVGALHCLAVTSENQ-VWAWGDNDHGQQGNGTTCVNRRP 3397



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG     +  +T +  ++++G+GDYG+LG G +   K+P R+  L  + V  V CG  
Sbjct: 4147 VACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQ 4206

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G +VY +G G+Y +LG G+
Sbjct: 4207 FSVALCQCG-SVYTWGKGDYHRLGHGS 4232



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 2/78 (2%)

Query: 9    IPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + +++ I  ++   G +H LA+S  G+V++WG   D +LG GN+++Y  P+L+ ALS 
Sbjct: 4030 LASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITALSG 4089

Query: 67   KNIRQVSAGRSHSAAWTA 84
              +  ++ G +HSA  TA
Sbjct: 4090 LEVVCIACGGAHSACLTA 4107



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 13/122 (10%)

Query: 382 GASWT------GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           G +W+      GR+    T  +  P    +   +    +A G   SAV+TS G LYT+G 
Sbjct: 544 GGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLACSAVITSRGALYTWGR 603

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESV-----SCGLNHTVCIADKGKAVYAFGDGE 490
           G  GRLGHGT  N   P+  V+ N  ++E +       G   T+C   +G AV  FG+GE
Sbjct: 604 GAQGRLGHGTIENCLTPQ-PVSFNAHNIERIIDVALGWGEGSTLCCTWEG-AVQVFGEGE 661

Query: 491 YG 492
            G
Sbjct: 662 AG 663



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 3/103 (2%)

Query: 397  QSVPLTFANRLQYYEAAIACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
            Q VP        Y    +ACG +   +  +T+ G ++++G+GD+G+LG G +    +P  
Sbjct: 3236 QLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAIPMN 3295

Query: 455  VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            V  LN + V  V CG   ++ +   G+ V+ +G G+Y +LG G
Sbjct: 3296 VERLNSLGVTQVECGAQFSLALTRDGE-VWTWGKGDYFRLGHG 3337



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 43/70 (61%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
            +  V +  G +H LA++  G+V++WG   D +LG GN+I    P+L+ +L+ + +  ++ 
Sbjct: 3144 VRRVAVHSGGKHALALTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIAC 3203

Query: 75   GRSHSAAWTA 84
            G +HSA  TA
Sbjct: 3204 GSAHSACVTA 3213



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 383 ASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLG 442
            +W G +     G    P   +    +    +  G    A +T  G +YT+G GD  RLG
Sbjct: 648 CTWEGAVQVFGEGEAGTPRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLG 707

Query: 443 HGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           HG   + K+P+ V AL  + +  +S G +H + ++ +G  ++ +G  E  ++        
Sbjct: 708 HGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEG-VLFVWGTHERTQIS------N 760

Query: 503 PTPQ 506
           P PQ
Sbjct: 761 PVPQ 764



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 34/48 (70%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            IV I+ G+ H +A ++TG+V+ WG+N + QLG G  +  + P+L++AL
Sbjct: 4250 IVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLLMAL 4297



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           +H    +S G  +++G G+ GRLGHG T     P+ +  L    V  V+ GL  +  I  
Sbjct: 535 RHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLACSAVITS 594

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +G A+Y +G G  G+LG G      TPQ
Sbjct: 595 RG-ALYTWGRGAQGRLGHGTIENCLTPQ 621



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 30/53 (56%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
            + A +   ++ ++VG  H LAV++  QV+AWG+N   Q G G     R P LV
Sbjct: 3348 VEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGNGTTCVNRRPALV 3400



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 35/75 (46%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   K + ++ +  G++  +A+   G V+ WG     +LG G+  + R P  V  +  K 
Sbjct: 4190 IDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKM 4249

Query: 69   IRQVSAGRSHSAAWT 83
            I  ++ G  H  A T
Sbjct: 4250 IVSIATGSLHCVACT 4264



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 3    GTSGRHIPA----FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G  IP       ++ +  +  G +  LA++  G+V+ WG     +LG G   + R P
Sbjct: 3286 GSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRP 3345

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWTA 84
             LV AL  + +  V+ G  H  A T+
Sbjct: 3346 TLVEALRGRRVIHVAVGALHCLAVTS 3371



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 36/75 (48%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + A     +  +  G     A+++ GQV+ WG     +LG GN  + + P+LV AL  
Sbjct: 666 RALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQG 725

Query: 67  KNIRQVSAGRSHSAA 81
             I  +S G SH  A
Sbjct: 726 IKIVDLSLGASHGIA 740



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 2/77 (2%)

Query: 10   PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
            PA   +  V I+ G++ +  VS+ G++FA G  ++ +LGLG+  N   P+    LS+  +
Sbjct: 3085 PALSALRPVHIAGGSKTLFIVSHDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLV 3144

Query: 70   RQVS--AGRSHSAAWTA 84
            R+V+  +G  H+ A TA
Sbjct: 3145 RRVAVHSGGKHALALTA 3161



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 28/47 (59%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
            +IA G  H    T  G +YT+G+ D G+LG GTT+  + P  ++AL 
Sbjct: 4252 SIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLLMALQ 4298



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I A   + +V I+ G  H   ++  G+++ WG     +LG G+  +   P+LV ALS+  
Sbjct: 4084 ITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFR 4143

Query: 69   IRQVSAG 75
            +  V+ G
Sbjct: 4144 VIDVACG 4150



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I +     ++ I+ G+ H   V+  G ++ WG     +LG G+      P++V AL+N
Sbjct: 3188 RLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQLVPKMVEALAN 3247

Query: 67   KNIRQVSAG 75
              + QV+ G
Sbjct: 3248 YRVIQVACG 3256



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 7    RHIPAFKNIHIVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            + + A  N  ++ ++ G+     LA++  G+VF+WG+    +LG G       P  V  L
Sbjct: 3240 KMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAIPMNVERL 3299

Query: 65   SNKNIRQVSAGRSHSAAWT 83
            ++  + QV  G   S A T
Sbjct: 3300 NSLGVTQVECGAQFSLALT 3318



 Score = 38.1 bits (87), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 7/76 (9%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS-NK 67
           + A + I IVD+S+G  H +A+S+ G +F WG +         QI+   PQ V A + + 
Sbjct: 720 VEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHER------TQISNPVPQPVKAFNPSF 773

Query: 68  NIRQVSAGRSHSAAWT 83
               VS+G +   AW+
Sbjct: 774 KANGVSSGPTQIFAWS 789


>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 657

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 59/87 (67%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            I+ G++HSA VT +G LYT+G GDYGRLGHG + +  VP  V  ++  +V  V CG +H
Sbjct: 517 CISAGYRHSACVTDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDVS--NVGKVVCGSSH 574

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ ++   + V++FG G+ GKLG G+T
Sbjct: 575 TIAVSQDSRTVWSFGGGDNGKLGHGDT 601



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 59/88 (67%), Gaps = 4/88 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV--VALNKVHVESVSCGLNHTVCIA 477
           H+  +TS G ++++G+GDYG+LGHG T+  K P+ +  V + KV V  +S G  H+ C+ 
Sbjct: 471 HTLALTSEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKV-VVCISAGYRHSACVT 529

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           D G+ +Y +G+G+YG+LG G++  +  P
Sbjct: 530 DDGQ-LYTWGEGDYGRLGHGDSNSRNVP 556



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 8/110 (7%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           + ++FA   Q  EA   C F    V++S+G +   G G YGRLG G + N    +++   
Sbjct: 401 MAISFAES-QQIEAGQYCTF----VISSDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFD 455

Query: 459 NKV--HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           N +   + S      HT+ +  +G+ V+++GDG+YGKLG GNT  +  P+
Sbjct: 456 NSIITRISSSKGSDGHTLALTSEGQ-VFSWGDGDYGKLGHGNTLTQKYPK 504



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 4/76 (5%)

Query: 12  FKNIHIVDISV--GTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNK 67
           F N  I  IS   G++ H LA+++ GQVF+WG+    +LG GN +  + P+++L  L  K
Sbjct: 454 FDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGK 513

Query: 68  NIRQVSAGRSHSAAWT 83
            +  +SAG  HSA  T
Sbjct: 514 VVVCISAGYRHSACVT 529



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           + CG  H+  V+ +   +++FG GD G+LGHG T     P+ + +L  + ++ V CG   
Sbjct: 568 VVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQS 627

Query: 473 TVCIADKGK 481
           ++ +   G+
Sbjct: 628 SLALTSTGQ 636



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V IS G  H   V++ GQ++ WG     +LG G+  +   P LV  +S  N+ +V  G 
Sbjct: 515 VVCISAGYRHSACVTDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDVS--NVGKVVCGS 572

Query: 77  SHSAA 81
           SH+ A
Sbjct: 573 SHTIA 577


>gi|449519078|ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 472

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 72/136 (52%), Gaps = 7/136 (5%)

Query: 372 PEIIPLECFE-GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL 430
           P IIP  C E  AS   R + I    Q+        L  Y   IACG +HS VVT  G L
Sbjct: 260 PHIIP--CIELPASAKDRSSVIY---QASKAAAGKVLGNYVKGIACGGRHSVVVTDTGAL 314

Query: 431 YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490
            TFG G YG+ G G T +   P  V +L+   VES+S GL HTVCI  +G  VYAFG  +
Sbjct: 315 LTFGWGLYGQCGQGNTNDLLRPTCVSSLSSTQVESISAGLWHTVCITAEG-LVYAFGGNQ 373

Query: 491 YGKLGLGNTGLKPTPQ 506
           +G+LG G    +  P+
Sbjct: 374 FGQLGTGTDQGETIPR 389



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGL 470
           +I+ G  H+  +T+ G +Y FG   +G+LG GT     +P  + A  L     + VSCG 
Sbjct: 349 SISAGLWHTVCITAEGLVYAFGGNQFGQLGTGTDQGETIPRLLDAPILEGKCAKRVSCGA 408

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            H V + D G+ ++++G  +YG+LGLG++
Sbjct: 409 RHNVVLTDDGQ-LFSWGWNKYGQLGLGDS 436



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV--------------- 456
           AA+A G +H+  ++  G ++ +G+G  G+LG GT +       ++               
Sbjct: 219 AAVAAGGRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPCIELPASAKDRSSV 278

Query: 457 -------ALNKV---HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKPT 504
                  A  KV   +V+ ++CG  H+V + D G A+  FG G YG+ G GNT   L+PT
Sbjct: 279 IYQASKAAAGKVLGNYVKGIACGGRHSVVVTDTG-ALLTFGWGLYGQCGQGNTNDLLRPT 337



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 43/65 (66%), Gaps = 1/65 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +H+ V+T +G L+++G   YG+LG G +++  +P + V+++     ++ CG  HT
Sbjct: 404 VSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRNIPSK-VSIDGCLPRNIVCGWWHT 462

Query: 474 VCIAD 478
           + +A+
Sbjct: 463 LMLAE 467



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-----PQLVLALSNKN 68
            + I  ++ G  H LA+S+ GQV+ WG+  + QLGLG ++         P + L  S K+
Sbjct: 215 GVKIAAVAAGGRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPCIELPASAKD 274

Query: 69  IRQVSAGRSHSAA 81
              V    S +AA
Sbjct: 275 RSSVIYQASKAAA 287



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 36/72 (50%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           ++  I+ G  H + V++TG +  +G     Q G GN  +   P  V +LS+  +  +SAG
Sbjct: 294 YVKGIACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTNDLLRPTCVSSLSSTQVESISAG 353

Query: 76  RSHSAAWTAPPL 87
             H+   TA  L
Sbjct: 354 LWHTVCITAEGL 365



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 6/62 (9%)

Query: 6   GRHIPAFKNIHIVD------ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQ 59
           G  IP   +  I++      +S G  H + +++ GQ+F+WG N   QLGLG+ I+   P 
Sbjct: 384 GETIPRLLDAPILEGKCAKRVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRNIPS 443

Query: 60  LV 61
            V
Sbjct: 444 KV 445



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +  +  +  IS G  H + ++  G V+A+G N   QLG G       P+L+ A  L  
Sbjct: 339 VSSLSSTQVESISAGLWHTVCITAEGLVYAFGGNQFGQLGTGTDQGETIPRLLDAPILEG 398

Query: 67  KNIRQVSAGRSHS 79
           K  ++VS G  H+
Sbjct: 399 KCAKRVSCGARHN 411


>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
 gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
          Length = 467

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 1/119 (0%)

Query: 388 RITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM 447
           R + +  G  ++P   +N    Y   IACG +HSAVVT  G L TFG G YG+ GHG+T 
Sbjct: 267 RSSVVHNGSTNLPAQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGSTN 326

Query: 448 NWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +   P  + +L+ + +E ++ GL HT+CI   G+ VY FG  ++G+LG G +  +  P+
Sbjct: 327 DQLRPTSLPSLSGIQIERIAAGLWHTMCITIDGR-VYVFGGNQFGQLGTGASQGETLPR 384



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV--ALNKVHVESVSCGLN 471
           IA G  H+  +T +G +Y FG   +G+LG G +    +P  +    L    V+ VSCG  
Sbjct: 345 IAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQGETLPRLLEDPCLESKLVKMVSCGAR 404

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H+  + + G+ V+++G  +YG+LG+G++  + TP
Sbjct: 405 HSAILLEDGQ-VFSWGWNKYGQLGVGDSIDRNTP 437



 Score = 45.1 bits (105), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSA++  +G ++++G   YG+LG G +++   P + V +     + V+CG  HT
Sbjct: 399 VSCGARHSAILLEDGQVFSWGWNKYGQLGVGDSIDRNTPTQ-VPIEGCRPKMVACGWWHT 457

Query: 474 VCIAD 478
           + +A+
Sbjct: 458 LLLAE 462



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLV 61
           + I  ++ G  H LA+S+TGQV+ WG   + QLGLG+++     P L+
Sbjct: 208 VRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRVKMVSSPHLI 255



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL--ALSN 66
           +P+   I I  I+ G  H + ++  G+V+ +G N   QLG G       P+L+    L +
Sbjct: 334 LPSLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQGETLPRLLEDPCLES 393

Query: 67  KNIRQVSAGRSHSA 80
           K ++ VS G  HSA
Sbjct: 394 KLVKMVSCGARHSA 407



 Score = 38.5 bits (88), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           P  ++  +  +S G  H   +   GQVF+WG N   QLG+G+ I+   P  V  +     
Sbjct: 389 PCLESKLVKMVSCGARHSAILLEDGQVFSWGWNKYGQLGVGDSIDRNTPTQV-PIEGCRP 447

Query: 70  RQVSAGRSHSAAWTAPPL 87
           + V+ G  H+      PL
Sbjct: 448 KMVACGWWHTLLLAETPL 465


>gi|449448608|ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 485

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 72/136 (52%), Gaps = 7/136 (5%)

Query: 372 PEIIPLECFE-GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL 430
           P IIP  C E  AS   R + I    Q+        L  Y   IACG +HS VVT  G L
Sbjct: 273 PHIIP--CIELPASAKDRSSVIY---QASKAAAGKVLGNYVKGIACGGRHSVVVTDTGAL 327

Query: 431 YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490
            TFG G YG+ G G T +   P  V +L+   VES+S GL HTVCI  +G  VYAFG  +
Sbjct: 328 LTFGWGLYGQCGQGNTNDLLRPTCVSSLSSTQVESISAGLWHTVCITAEG-LVYAFGGNQ 386

Query: 491 YGKLGLGNTGLKPTPQ 506
           +G+LG G    +  P+
Sbjct: 387 FGQLGTGTDQGETIPR 402



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGL 470
           +I+ G  H+  +T+ G +Y FG   +G+LG GT     +P  + A  L     + VSCG 
Sbjct: 362 SISAGLWHTVCITAEGLVYAFGGNQFGQLGTGTDQGETIPRLLDAPILEGKCAKRVSCGA 421

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            H V + D G+ ++++G  +YG+LGLG++
Sbjct: 422 RHNVVLTDDGQ-LFSWGWNKYGQLGLGDS 449



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV--------------- 456
           AA+A G +H+  ++  G ++ +G+G  G+LG GT +       ++               
Sbjct: 232 AAVAAGGRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPCIELPASAKDRSSV 291

Query: 457 -------ALNKV---HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKPT 504
                  A  KV   +V+ ++CG  H+V + D G A+  FG G YG+ G GNT   L+PT
Sbjct: 292 IYQASKAAAGKVLGNYVKGIACGGRHSVVVTDTG-ALLTFGWGLYGQCGQGNTNDLLRPT 350



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 43/65 (66%), Gaps = 1/65 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +H+ V+T +G L+++G   YG+LG G +++  +P + V+++     ++ CG  HT
Sbjct: 417 VSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRNIPSK-VSIDGCLPRNIVCGWWHT 475

Query: 474 VCIAD 478
           + +A+
Sbjct: 476 LMLAE 480



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-----PQLVLALSNKNI 69
           + I  ++ G  H LA+S+ GQV+ WG+  + QLGLG ++         P + L  S K+ 
Sbjct: 229 VKIAAVAAGGRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPCIELPASAKDR 288

Query: 70  RQVSAGRSHSAA 81
             V    S +AA
Sbjct: 289 SSVIYQASKAAA 300



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 36/72 (50%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           ++  I+ G  H + V++TG +  +G     Q G GN  +   P  V +LS+  +  +SAG
Sbjct: 307 YVKGIACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTNDLLRPTCVSSLSSTQVESISAG 366

Query: 76  RSHSAAWTAPPL 87
             H+   TA  L
Sbjct: 367 LWHTVCITAEGL 378



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 6/62 (9%)

Query: 6   GRHIPAFKNIHIVD------ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQ 59
           G  IP   +  I++      +S G  H + +++ GQ+F+WG N   QLGLG+ I+   P 
Sbjct: 397 GETIPRLLDAPILEGKCAKRVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRNIPS 456

Query: 60  LV 61
            V
Sbjct: 457 KV 458



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +  +  +  IS G  H + ++  G V+A+G N   QLG G       P+L+ A  L  
Sbjct: 352 VSSLSSTQVESISAGLWHTVCITAEGLVYAFGGNQFGQLGTGTDQGETIPRLLDAPILEG 411

Query: 67  KNIRQVSAGRSHS 79
           K  ++VS G  H+
Sbjct: 412 KCAKRVSCGARHN 424


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 9/160 (5%)

Query: 353 QSLRAIRDIHLSGVTEANFPEIIPLECFEGASWT------GRITPIVTGGQSVPLTFANR 406
           + L A++ + ++ +    F      +  +GA W+      GR+       Q  P      
Sbjct: 188 KKLEALKGVKITQIAACGFHTAAITQ--DGALWSWGEGKFGRLGQGNEKNQVTPCCVEGL 245

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
                  +ACG  HSA VT +G + TFG G++G+LGHG   N  VP  V AL    +  V
Sbjct: 246 QGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQV 305

Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +CG +HTV +++ GK V+ FG+G++GKLG G       P+
Sbjct: 306 TCGWSHTVTLSEDGK-VFTFGNGDHGKLGHGANAKSALPK 344



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 3/113 (2%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VP 452
           T  Q +P+            IACG  H+ V+T +  ++++G GD GRLGH    +WK VP
Sbjct: 24  TNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADN-HWKYVP 82

Query: 453 ERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             V AL    ++ V+CG  HT  I+D G A++ +G G YGKLG GN    P P
Sbjct: 83  HLVSALTGKSIKQVTCGSYHTAAISDTG-ALWTWGGGMYGKLGHGNEVGHPAP 134



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG  H+A ++  G L+T+G G YG+LGHG  +    P RV A     VE ++CG  HT
Sbjct: 96  VTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHT 155

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
             +   G+ VY +GD E G  G+G  
Sbjct: 156 AALLAGGE-VYCWGDRENGVCGIGEA 180



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG+ H+  ++ +G ++TFGNGD+G+LGHG      +P+ V +L  + V  V+    HT
Sbjct: 305 VTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVESLANMKVAKVASYNEHT 364

Query: 474 V--CIADKGKAVYAF 486
           V  C A++ +AV +F
Sbjct: 365 VALCHAEQEQAVMSF 379



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 42/73 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   K++ +V I+ G+ H + ++    V++WG   D +LG  +      P LV AL+ K+
Sbjct: 33  VEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHLVSALTGKS 92

Query: 69  IRQVSAGRSHSAA 81
           I+QV+ G  H+AA
Sbjct: 93  IKQVTCGSYHTAA 105



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A     I  ++ G+ H  A+S+TG ++ WG     +LG GN++ +  P  V A   + 
Sbjct: 85  VSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEVGHPAPCRVEAFIGRE 144

Query: 69  IRQVSAGRSHSAA 81
           + Q++ G  H+AA
Sbjct: 145 VEQIACGSRHTAA 157



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           LY++G G+ G+ G+G+T + ++P  V  L  + V  ++CG  HTV + +  K V+++G G
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTED-KDVWSWGRG 66

Query: 490 EYGKLGLGNTGLKPTPQ 506
           + G+LG  +   K  P 
Sbjct: 67  DDGRLGHADNHWKYVPH 83



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + A K + I  I+    H  A++  G +++WG     +LG GN+ N   P  V  L  
Sbjct: 188 KKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQG 247

Query: 67  KNIRQVSAGRSHSAAWT 83
             ++QV+ G  HSA  T
Sbjct: 248 VRVKQVACGGFHSACVT 264



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A +   IV ++ G  H + +S  G+VF +GN    +LG G       P+LV +L+N  
Sbjct: 294 VKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVESLANMK 353

Query: 69  IRQVSAGRSHSAA 81
           + +V++   H+ A
Sbjct: 354 VAKVASYNEHTVA 366



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 34/71 (47%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   + + +  ++ G  H   V+  G V  +G     QLG G++ N   P LV AL    
Sbjct: 242 VEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAG 301

Query: 69  IRQVSAGRSHS 79
           I QV+ G SH+
Sbjct: 302 IVQVTCGWSHT 312



 Score = 41.6 bits (96), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNK 67
           + AF    +  I+ G+ H  A+   G+V+ WG+  +   G+G    ++  P+ + AL   
Sbjct: 137 VEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGV 196

Query: 68  NIRQVSAGRSHSAAWT 83
            I Q++A   H+AA T
Sbjct: 197 KITQIAACGFHTAAIT 212


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA VT  G++Y +G  DYG LG G T + + P+RV   + +    VSCG  HT
Sbjct: 232 VACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHT 291

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + +A  G   YAFG GEYG+LGLG+T  +  P 
Sbjct: 292 MVVAKSGD-CYAFGRGEYGRLGLGDTKSRTRPH 323



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 7/112 (6%)

Query: 396 GQSVPLTFANRLQYYEAA----IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV 451
           GQ+       R+++++      ++CG  H+ VV  +G  Y FG G+YGRLG G T +   
Sbjct: 262 GQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTR 321

Query: 452 PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
           P  V AL    V   +CG +HT+ +   G A Y  G  ++G+LG+  T +KP
Sbjct: 322 PHLVKALKGQTVIQAACGGSHTLFVTSDGIA-YVAGRPDHGRLGM--TDMKP 370



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 55/86 (63%), Gaps = 3/86 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK--VHVESVSCGL 470
           A++CG +H+  +T++G +Y++G G  G+LGHG   +  VP+++    +  + V+ VSCG 
Sbjct: 57  AVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGG 116

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGL 496
            H+  + + G  +Y +G+  +G+LGL
Sbjct: 117 CHSAAVTNDG-TLYMWGETHWGQLGL 141



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT----------MNWKVPERVVALNKVHV 463
           ++CG  H+A +T+ G +Y +G GD G+LG G+           +    P  V   N   V
Sbjct: 170 VSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKV 229

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             V+CG  H+  + ++G  VY +G  +YG LG+G T  + TP+
Sbjct: 230 VQVACGAFHSAAVTEQGH-VYIWGKEDYGMLGVGQTSDQQTPK 271



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 7/97 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG---HGTTMNWKVPERVVALNKVHVESV---S 467
           ++CG  HSA VT++G LY +G   +G+LG        +   P +   L  V  ESV   S
Sbjct: 112 VSCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVS 171

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           CG  HT  + + G+ VY +G G+ G+LG+G+  LK T
Sbjct: 172 CGGTHTAALTNLGR-VYVWGRGDSGQLGIGSAWLKDT 207



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 34/185 (18%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + +  F +I  + +S G  H + V+ +G  +A+G     +LGLG+  +   P LV AL  
Sbjct: 271 KRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKG 330

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDH--YGHLQNKPLPLIR 124
           + + Q + G SH+   T+  +  +  G               PDH   G    KPL  + 
Sbjct: 331 QTVIQAACGGSHTLFVTSDGI-AYVAGR--------------PDHGRLGMTDMKPLS-VP 374

Query: 125 ARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSV 184
            RL       DL    VR +  G           +S  +  S RP+F+P +  LP  + V
Sbjct: 375 TRL-------DLGPIPVRQVSAGGA---------HSMALTHSSRPIFSPMISPLPASKPV 418

Query: 185 GKTML 189
             T L
Sbjct: 419 PHTEL 423



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 10/77 (12%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ----------INYREPQLVLALSN 66
           +V +S G  H  A++N G+V+ WG     QLG+G+           +    P LV   + 
Sbjct: 167 VVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNG 226

Query: 67  KNIRQVSAGRSHSAAWT 83
           + + QV+ G  HSAA T
Sbjct: 227 EKVVQVACGAFHSAAVT 243



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR--QVSA 74
           IV +S G+ H +A++ +G V++WG  S  QLG G+  +   PQ +     + ++   VS 
Sbjct: 55  IVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSC 114

Query: 75  GRSHSAAWT 83
           G  HSAA T
Sbjct: 115 GGCHSAAVT 123



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           ACG  H+  VTS+G  Y  G  D+GRLG        VP R + L  + V  VS G  H++
Sbjct: 337 ACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTR-LDLGPIPVRQVSAGGAHSM 395

Query: 475 CIADKGKAVYA 485
            +    + +++
Sbjct: 396 ALTHSSRPIFS 406



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 32/71 (45%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +  F    +V ++ G  H  AV+  G V+ WG      LG+G   + + P+ V    +  
Sbjct: 221 VEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIP 280

Query: 69  IRQVSAGRSHS 79
             +VS G  H+
Sbjct: 281 ALRVSCGGWHT 291


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 711 VIDVAAGSTHCLALT 725



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 722 LALTEDSE-VHSWGSND 737



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778


>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
          Length = 1386

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 62/87 (71%), Gaps = 1/87 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CG+ HSA VTS+G + ++G G +G+LGHG T N+ +P  + AL K+ +  VSCG  H+
Sbjct: 971  LSCGYHHSAAVTSDGMILSWGRGIFGQLGHGDTENYSLPTPIEALVKIQIIQVSCGWQHS 1030

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTG 500
            + ++ +G+ ++++G GE G+LG G+T 
Sbjct: 1031 MALSSQGR-IFSWGYGEDGQLGHGDTN 1056



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 51/77 (66%), Gaps = 3/77 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV--VALNKVHVESVSCGLN 471
            ++CG++HS  ++S G ++++G G+ G+LGHG T ++ +P+ +     N ++V  ++CG +
Sbjct: 1023 VSCGWQHSMALSSQGRIFSWGYGEDGQLGHGDTNDYLLPKEIDFFRKNSINVGMIACGHS 1082

Query: 472  HTVCIAD-KGKAVYAFG 487
            H+ CI D +   +Y +G
Sbjct: 1083 HSGCITDGQSSQLYLWG 1099



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 2/77 (2%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV--LALSN 66
            I A   I I+ +S G +H +A+S+ G++F+WG   D QLG G+  +Y  P+ +     ++
Sbjct: 1012 IEALVKIQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQLGHGDTNDYLLPKEIDFFRKNS 1071

Query: 67   KNIRQVSAGRSHSAAWT 83
             N+  ++ G SHS   T
Sbjct: 1072 INVGMIACGHSHSGCIT 1088



 Score = 42.4 bits (98), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%)

Query: 16   HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
            +   +S G  H  AV++ G + +WG     QLG G+  NY  P  + AL    I QVS G
Sbjct: 967  NFTQLSCGYHHSAAVTSDGMILSWGRGIFGQLGHGDTENYSLPTPIEALVKIQIIQVSCG 1026

Query: 76   RSHSAAWTA 84
              HS A ++
Sbjct: 1027 WQHSMALSS 1035



 Score = 41.6 bits (96), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVV-ALNKVHVESVSCGLN 471
            I+ G +H+A VT +G LY +G   Y +LG G +  ++ VP +V   L    V+ VSCG  
Sbjct: 1316 ISAGCRHAACVTDSGKLYAWGFNFYEQLGLGDSEKDFDVPTKVSKGLQSSKVKFVSCGYF 1375

Query: 472  HT 473
            HT
Sbjct: 1376 HT 1377



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLV-LALSNKNIRQVSA 74
            +V IS G  H   V+++G+++AWG N   QLGLG+ + ++  P  V   L +  ++ VS 
Sbjct: 1313 VVQISAGCRHAACVTDSGKLYAWGFNFYEQLGLGDSEKDFDVPTKVSKGLQSSKVKFVSC 1372

Query: 75   GRSHSAA 81
            G  H+ A
Sbjct: 1373 GYFHTGA 1379



 Score = 39.7 bits (91), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 5/71 (7%)

Query: 430  LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLNHTVCIADKGKAVYAFGD 488
            ++ +G+G  GR G+G   + K+P +    N  H    +SCG +H+  +   G  + ++G 
Sbjct: 937  VFVWGSGKDGRCGNGKESSEKLPNQA---NTSHNFTQLSCGYHHSAAVTSDG-MILSWGR 992

Query: 489  GEYGKLGLGNT 499
            G +G+LG G+T
Sbjct: 993  GIFGQLGHGDT 1003


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ V  L  + V  V CG   +V +   G+ VY++G G+  +LG G 
Sbjct: 642 GSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQ-VYSWGKGDNQRLGHGT 694



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH----VESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A         V  ++CG  ++  
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAA 566

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 652 VEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 712 VIDVAAGSTHCLALT 726



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 663 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 723 LALTEDSE-VHSWGSND 738



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+LV  L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 657

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 658 LDVVKVRCGSQFSVALT 674



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)

Query: 16  HIVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ-- 71
           +IV I+  ++  H LA++ TG+V++WG     +LG G+ +   EP+L+ A   K   Q  
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRV 554

Query: 72  --VSAGRSHSAAWTA 84
             ++ G ++SAA TA
Sbjct: 555 VHIACGSTYSAAITA 569



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 38/76 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   ++D++ G+ H LA++   +V +WG+N   Q          EP  +  L  K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLHATKPEPAALPGLDTKH 763

Query: 69  IRQVSAGRSHSAAWTA 84
           I  ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 547 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 606

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 607 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 640



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 572 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 631

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G
Sbjct: 632 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHG 683



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 497 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 556

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 557 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 585



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 642 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 701

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 702 VIDVAAGSTHCLALT 716



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 653 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 712

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 713 LALTEDSE-VHSWGSND 728



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 482 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 541

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 542 KHVVHIACGSTYSAAITA 559



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 588 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 647

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 648 LDVVKVRCGSQFSIALT 664



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+I  ++ G 
Sbjct: 702 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGP 761

Query: 77  SHSAAWTA 84
           + S AW++
Sbjct: 762 AQSFAWSS 769


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 518 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 577

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 578 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 611



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 3/113 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 543 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 602

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G
Sbjct: 603 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHG 654



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 468 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 527

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 528 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 556



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 613 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 672

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 673 VIDVAAGSTHCLALT 687



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 624 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 683

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 684 LALTEDSE-VHSWGSND 699



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 453 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 512

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 513 KHVVHIACGSTYSAAITA 530



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 559 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 618

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 619 LDVVKVRCGSQFSIALT 635



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+I  ++ G 
Sbjct: 673 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGP 732

Query: 77  SHSAAWTA 84
           + S AW++
Sbjct: 733 AQSFAWSS 740


>gi|154420948|ref|XP_001583488.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121917730|gb|EAY22502.1| hypothetical protein TVAG_035250 [Trichomonas vaginalis G3]
          Length = 438

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 15/182 (8%)

Query: 212 KPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPL 271
           K I AQ +RQ+ K+  S L+L  + W V  +GE A DAGG   +   E+   +      L
Sbjct: 87  KSIIAQFTRQISKLSPSRLQLREKPWHVSFVGESAIDAGGPRKELFIELANSIFQPTSHL 146

Query: 272 LVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +++PNG    G  RD Y+  P  +    S   +K +G   G+ IR   P  +P +P +W
Sbjct: 147 FIQSPNGRNHCGSFRDAYV--PSTTLGKDSYDQYKAIGTFLGIIIRNGFPQDIPFAPFIW 204

Query: 332 KLIVQEPVTFTDL----EDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTG 387
           K +  E +   D+    E   TL+ +  ++  D+  +   +  +  I         SWTG
Sbjct: 205 KHLAGELLQENDIMMVDEQVKTLFDRLRQSKNDLDFTSRFQQKWTYI---------SWTG 255

Query: 388 RI 389
            I
Sbjct: 256 EI 257


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 547 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 606

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 607 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 640



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 572 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 631

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 632 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 684



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 497 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 556

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 557 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 585



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 642 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 701

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 702 VIDVAAGSTHCLALT 716



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 653 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 712

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 713 LALTEDSE-VHSWGSND 728



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 482 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 541

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 542 KHVVHIACGSTYSAAITA 559



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 588 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 647

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 648 LDVVKVRCGSQFSIALT 664



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           ++D++ G+ H LA++   +V +WG+N   Q     ++   EP  +  L  K+I  ++ G 
Sbjct: 702 VIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGP 761

Query: 77  SHSAAWTA 84
           + S AW++
Sbjct: 762 AQSFAWSS 769


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 62/86 (72%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+  +T++G +YTFG+G  G+LG G+  M+  +P+ V AL+K  ++ ++CG +H
Sbjct: 246 VACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESH 305

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  ++DKG+ ++ FGDG +GKLG G+
Sbjct: 306 TAVVSDKGE-LFTFGDGRHGKLGQGD 330



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE-RVVALNKVHVESVSCGLN 471
           ++ACG+ H+AVVT++G LYTFG  + G+LG G     KV + +VV      V  V+CG N
Sbjct: 192 SVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGN 251

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV +   G+ VY FG G+ G+LGLG
Sbjct: 252 HTVALTASGQ-VYTFGSGQNGQLGLG 276



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+ VVT NG L+TFGN ++G+LG G+      P  V AL    +  V+ G  HT
Sbjct: 40  IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + + D  K +Y+FG G  G LG G+
Sbjct: 100 LAVTDSNK-LYSFGQGSEGALGHGD 123



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 6/86 (6%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           IACG  HSA +T NG LY +G+   G+LG    T+++     ++ L K  V SV+CG  H
Sbjct: 144 IACGGYHSAAITKNGELYIWGSNSEGQLGLKNDTISYPT---MLDLGK-SVISVACGYYH 199

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  +   GK +Y FG+ E GKLGLG+
Sbjct: 200 TAVVTADGK-LYTFGETEGGKLGLGD 224



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  H+  VT +  LY+FG G  G LGHG   +  +P  + +L    V  ++CG  H+
Sbjct: 92  VAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHS 151

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             I   G+ +Y +G    G+LGL N
Sbjct: 152 AAITKNGE-LYIWGSNSEGQLGLKN 175



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 40/67 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + DI+ G EH + V+  G++F +GNN   QLG+G+     +P  V AL  + I  V+AGR
Sbjct: 37  VTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGR 96

Query: 77  SHSAAWT 83
            H+ A T
Sbjct: 97  FHTLAVT 103



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           +V ++ G  H +A++ +GQV+ +G+  + QLGLG++I +   P+LV ALS + I+ ++ G
Sbjct: 243 VVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACG 302

Query: 76  RSHSA 80
            SH+A
Sbjct: 303 ESHTA 307



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           IACG  H+AVV+  G L+TFG+G +G+LG G     N   P +V  L +  V  ++CG  
Sbjct: 299 IACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGC 358

Query: 472 HTVCIADK 479
           HT+   +K
Sbjct: 359 HTIVACNK 366



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ-INYREPQLVLALSNK 67
           I + ++  +  I+ G  H  A++  G+++ WG+NS+ QLGL N  I+Y  P + L L  K
Sbjct: 133 IESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKNDTISY--PTM-LDLG-K 188

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDH 111
           ++  V+ G  H+A  TA     +T G T    L LG   DI  H
Sbjct: 189 SVISVACGYYHTAVVTADG-KLYTFGETEGGKLGLG---DIEAH 228



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 11/78 (14%)

Query: 428 GYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G ++TFG   +G   + T   W   ++V          ++CG  HTV + + G+ ++ FG
Sbjct: 12  GAVFTFGKSRFG--DNRTNKFWIRSDKVT--------DIACGDEHTVVVTENGR-LFTFG 60

Query: 488 DGEYGKLGLGNTGLKPTP 505
           + E+G+LG+G+   +  P
Sbjct: 61  NNEWGQLGIGSNKTRNKP 78


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 753 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 812

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + + G+ V+++GDG+YGKLG G +    TP+
Sbjct: 813 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 846



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           GR+    +  +++P+  A    L+  + A   G   +  VT NG ++++G+GDYG+LG G
Sbjct: 778 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 837

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +   K P+ +  L  + V  V CG   ++ +   G+ VY++G G+  +LG G 
Sbjct: 838 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 890



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
           H   + + G +Y++G GD GRLGHG T+  + P+ + A +      HV  ++CG  ++  
Sbjct: 703 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 762

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I  +G+ +Y +G G YG+LG G++  +  P
Sbjct: 763 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 791



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +++ +V +  G++  +A++  GQV++WG   + +LG G + + R P+L+  L  K 
Sbjct: 848 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 907

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+AG +H  A T
Sbjct: 908 VIDVAAGSTHCLALT 922



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG + S  +T +G +Y++G GD  RLGHGT  + + P+ +  L    V  V+ G  H 
Sbjct: 859 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 918

Query: 474 VCIADKGKAVYAFGDGE 490
           + + +  + V+++G  +
Sbjct: 919 LALTEDSE-VHSWGSND 934



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
           A +NI  +       H LA++ TG+V++WG     +LG G+ +   EP+++ A S     
Sbjct: 688 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 747

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K++  ++ G ++SAA TA
Sbjct: 748 KHVVHIACGSTYSAAITA 765



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K + ++D++ G+     LAV+  GQV++WG+    +LG G     + P+L+  L +
Sbjct: 794 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 853

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++ +V  G   S A T
Sbjct: 854 LDVVKVRCGSQFSIALT 870


>gi|449669285|ref|XP_002154828.2| PREDICTED: E3 ubiquitin-protein ligase HECTD3-like [Hydra
           magnipapillata]
          Length = 862

 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 148/339 (43%), Gaps = 61/339 (17%)

Query: 126 RLKLLNRFSDLIYQVVR-LLPLGNVD-------QDWVQCTPYSW----LVHPSLR----- 168
           R ++LNRF  L   V++ LLPL           ++  Q  P S     L+   LR     
Sbjct: 408 RAQVLNRFISLFDSVIQYLLPLWEYTVGTYKCLEEIRQLLPLSKKRQGLIENCLRETEGA 467

Query: 169 -PLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKG 227
            P   P++Y   + R +    LV   F P       ++   Q  + +  ++ R   KM  
Sbjct: 468 APSTIPKIY---INRHLAAQQLVDPTFDPDGK----SSIFNQLYEAL--RVDRCETKM-- 516

Query: 228 SDLRLP---SRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNG 278
            D R P    + W+ K +GEG  D GG F D+++++  EL   +      +P  VR+PN 
Sbjct: 517 -DYRWPPKYEQWWECKFIGEGIIDQGGGFRDSLSDLAEELCPSSPDALLPLPYFVRSPNQ 575

Query: 279 VADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEP 338
            A +   RD YI N +     +   H++++G + G  +R  + L L L   +WK++  E 
Sbjct: 576 FATSNIYRDCYIPNSN----CRIFAHYEWIGQIMGACLRGNENLVLSLPLFIWKMLNCEK 631

Query: 339 VTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEG------ASWTGRITPI 392
           +++    D  ++ A  +R    +  + +TE  F     ++ FE           G + P+
Sbjct: 632 ISWE--RDYFSIDATEVRFHESV--AKMTEEEF-----IKSFENTLTYSMVLANGDVVPV 682

Query: 393 VTGGQSVPLTFANRLQYYEAAIA---CGFKHSAVVTSNG 428
           + GG+++ +++ NR+++ E         F    +   NG
Sbjct: 683 IEGGENIHVSYENRIEFLELVKKKRLSEFNEQVIAMKNG 721


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 62/93 (66%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A VT  G +YT+G G++G+LGHG  +N  VP RV +L +  V  ++CG +HT
Sbjct: 248 VACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQITCGWSHT 307

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V + D G+ VY +G+G++GKLG  +T     P+
Sbjct: 308 VTLTDTGE-VYTWGNGDHGKLGHNDTAKVTLPK 339



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           IACG  H+ V+T  G +YT+G GD GRLGHG    WK VP  V  L   ++  V+CG  H
Sbjct: 39  IACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDN-GWKFVPRLVEELRGKNIRQVTCGSYH 97

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           T  +   G  +Y +G G YGKLG GN     TP
Sbjct: 98  TAAVTVSGD-LYTWGGGMYGKLGHGNETGHSTP 129



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           ACGF H+A ++  G ++TFG G +GRLGH +  N  V   V AL    V+ V+CG  HT 
Sbjct: 198 ACGF-HTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTA 256

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + G+ VY +G GE+G+LG G+   K  P
Sbjct: 257 AVTETGE-VYTWGGGEHGQLGHGDKVNKTVP 286



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG  H+A VT +G LYT+G G YG+LGHG       P  V  L  + V  V+CG  HT
Sbjct: 91  VTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHT 150

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           V + +  K VY +GD E G  G G+T
Sbjct: 151 VVLLEN-KDVYTWGDKENGVSGHGDT 175



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           +  TS +H P    A     IV I+ G+ H + ++  G+V+ WG   D +LG G+     
Sbjct: 16  LGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKF 75

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+LV  L  KNIRQV+ G  H+AA T
Sbjct: 76  VPRLVEELRGKNIRQVTCGSYHTAAVT 102



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           ++VP    + L+     I CG+ H+  +T  G +YT+GNGD+G+LGH  T    +P+ V 
Sbjct: 283 KTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVD 342

Query: 457 ALNKVHVESVSCGLNHTVCIAD 478
            L+   V SV+    HTV + D
Sbjct: 343 VLDGKRVISVASYNEHTVALVD 364



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           +Y++G G+ G+LG G T +   P  + AL +  +  ++CG  HTV + ++G+ VY +G G
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGE-VYTWGRG 61

Query: 490 EYGKLGLGNTGLKPTPQ 506
           + G+LG G+ G K  P+
Sbjct: 62  DDGRLGHGDNGWKFVPR 78



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 7/111 (6%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + A     +  ++ G  H  AV+ TG+V+ WG     QLG G+++N   P  V +L  
Sbjct: 235 RFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLE 294

Query: 67  KNIRQVSAGRSHSAA-------WTAPPLPPHTPGHTPSSSLRLGLPQDIPD 110
           K + Q++ G SH+         +T         GH  ++ + L  P D+ D
Sbjct: 295 KLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLD 345



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +   +  +I  ++ G+ H  AV+ +G ++ WG     +LG GN+  +  P LV  L +
Sbjct: 78  RLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPYLVETLKS 137

Query: 67  KNIRQVSAGRSHS 79
             +RQV+ G  H+
Sbjct: 138 MQVRQVACGSRHT 150



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   IV IS    H  A+S  G+VF +G     +LG  ++ N    + V AL+ K 
Sbjct: 185 VEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKR 244

Query: 69  IRQVSAGRSHSAAWT 83
           ++QV+ G  H+AA T
Sbjct: 245 VKQVACGGFHTAAVT 259



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           ++ I+ G  H + +++TG+V+ WGN    +LG  +      P+ V  L  K +  V++  
Sbjct: 297 VLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASYN 356

Query: 77  SHSAAWTAP 85
            H+ A   P
Sbjct: 357 EHTVALVDP 365



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 27/48 (56%)

Query: 36 VFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
          V++WG   D QLGLG+  +   P  + AL+ + I Q++ G  H+   T
Sbjct: 3  VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLT 50


>gi|302793045|ref|XP_002978288.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
 gi|300154309|gb|EFJ20945.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
          Length = 454

 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           Y   IACG +HSA++T  G + TFG G YG+ G G+T +   P  V +L  +HV +++ G
Sbjct: 280 YIVGIACGGRHSAILTDGGAVLTFGWGLYGQCGQGSTEDELSPNYVSSLGGLHVTAIASG 339

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           L HT+CI D G+ VYAFG  ++G+LG+G 
Sbjct: 340 LWHTLCITDTGE-VYAFGGNQFGQLGVGG 367



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGL 470
           AIA G  H+  +T  G +Y FG   +G+LG G   +  +P+ V A  L     +SVSCG 
Sbjct: 335 AIASGLWHTLCITDTGEVYAFGGNQFGQLGVGGDHSETLPKLVEAAVLEDECAKSVSCGA 394

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H+    +KGK V+ +G  +YG+LGLG+TG + TP 
Sbjct: 395 RHSAITTEKGK-VFCWGWNKYGQLGLGDTGDRDTPH 429



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LS 65
           ++ +   +H+  I+ G  H L +++TG+V+A+G N   QLG+G   +   P+LV A  L 
Sbjct: 324 YVSSLGGLHVTAIASGLWHTLCITDTGEVYAFGGNQFGQLGVGGDHSETLPKLVEAAVLE 383

Query: 66  NKNIRQVSAGRSHSA 80
           ++  + VS G  HSA
Sbjct: 384 DECAKSVSCGARHSA 398



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +++CG +HSA+ T  G ++ +G   YG+LG G T +   P  V   ++    +V+CG  H
Sbjct: 389 SVSCGARHSAITTEKGKVFCWGWNKYGQLGLGDTGDRDTPHEVPLEHR--AVNVACGWWH 446

Query: 473 TVCIADK 479
           T+ + D+
Sbjct: 447 TLALTDQ 453


>gi|302765727|ref|XP_002966284.1| hypothetical protein SELMODRAFT_85679 [Selaginella moellendorffii]
 gi|300165704|gb|EFJ32311.1| hypothetical protein SELMODRAFT_85679 [Selaginella moellendorffii]
          Length = 453

 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           Y   IACG +HSA++T  G + TFG G YG+ G G+T +   P  V +L  +HV +++ G
Sbjct: 279 YIVGIACGGRHSAILTDGGAVLTFGWGLYGQCGQGSTEDELSPNYVSSLGGLHVTAIASG 338

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           L HT+CI D G+ VYAFG  ++G+LG+G 
Sbjct: 339 LWHTLCITDTGE-VYAFGGNQFGQLGVGG 366



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGL 470
           AIA G  H+  +T  G +Y FG   +G+LG G   +  +P+ V A  L     +SVSCG 
Sbjct: 334 AIASGLWHTLCITDTGEVYAFGGNQFGQLGVGGDHSETLPKLVEAAVLEDECAKSVSCGA 393

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H+    +KGK V+ +G  +YG+LGLG+TG + TP 
Sbjct: 394 RHSAITTEKGK-VFCWGWNKYGQLGLGDTGDRDTPH 428



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LS 65
           ++ +   +H+  I+ G  H L +++TG+V+A+G N   QLG+G   +   P+LV A  L 
Sbjct: 323 YVSSLGGLHVTAIASGLWHTLCITDTGEVYAFGGNQFGQLGVGGDHSETLPKLVEAAVLE 382

Query: 66  NKNIRQVSAGRSHSA 80
           ++  + VS G  HSA
Sbjct: 383 DECAKSVSCGARHSA 397



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +++CG +HSA+ T  G ++ +G   YG+LG G T +   P  V   ++    +V+CG  H
Sbjct: 388 SVSCGARHSAITTEKGKVFCWGWNKYGQLGLGDTGDRDTPHEVPLEHR--AVNVACGWWH 445

Query: 473 TVCIADK 479
           T+ + D+
Sbjct: 446 TLALTDQ 452


>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
          Length = 1302

 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 58/85 (68%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T  G +YTFG G YG+LGHGT +    VP+ V  L K  + +++CG +H
Sbjct: 265 VACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESH 323

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  IA+ G  ++ FGDG +GKLGLG
Sbjct: 324 TAVIAENG-LMFTFGDGRHGKLGLG 347



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AVVT NG LY FG+ D+G+LG G+      P  V AL     +   CG NHT
Sbjct: 57  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHT 116

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           +   + G    A G+GE G+LGLG+T  + T
Sbjct: 117 LVYTENGNMYAAGGNGE-GQLGLGDTEERTT 146



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+   F+N   V IS G EH   V+  G+++ +G+N   QLGLG++    +P  V A
Sbjct: 41  ENIPSKFWFRNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKA 100

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L  +  +    GR+H+  +T
Sbjct: 101 LKPEKTKLAVCGRNHTLVYT 120



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           Q+    +A G   SA VT +G L+ +G+   G++G        VP +V     +   S+S
Sbjct: 156 QHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVSVPCQVDVGKPIS--SIS 213

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
           CG  H+  I   G+ +Y FG+ E GKLGL
Sbjct: 214 CGYYHSAFITGDGE-LYTFGEPENGKLGL 241



 Score = 42.4 bits (98), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F N H I  ++ G+    AV+  GQ+F WG+NS+ Q+GL ++     P  V     K
Sbjct: 150 ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVSVPCQVDV--GK 207

Query: 68  NIRQVSAGRSHSAAWTA 84
            I  +S G  HSA  T 
Sbjct: 208 PISSISCGYYHSAFITG 224



 Score = 38.5 bits (88), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 22  VGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN-IRQVSAGRSHSA 80
            G  H L  +  G ++A G N + QLGLG+        L+   +N++ I+Q++AG   SA
Sbjct: 111 CGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSA 170

Query: 81  AWT 83
           A T
Sbjct: 171 AVT 173


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 65/93 (69%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A VT +G+++T+G G++G+LGHG  +N  +P RV +L   ++  ++CG +HT
Sbjct: 248 VACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHT 307

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V + DKG+ V+ +G+G++GKLG  +T     P+
Sbjct: 308 VALTDKGE-VFTWGNGDHGKLGHNDTNKVTEPK 339



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           I+CG  H+ V+T +G +YT+G GD GRLGHG    WK VP  V  L    V  V+CG  H
Sbjct: 39  ISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDN-GWKFVPRLVEDLRDKKVRQVTCGSYH 97

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           T  +   G+ +Y +G G YGKLG GN     TP
Sbjct: 98  TAAVTVSGE-LYTWGGGMYGKLGHGNENGHSTP 129



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 8/150 (5%)

Query: 355 LRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPI-----VTGGQSVPLTFANRLQY 409
           + +I+ +++  V   +   ++ LE  +  +W  +   +      +G Q  P   +  ++ 
Sbjct: 132 VESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEI 191

Query: 410 YEAAI-ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
               I ACGF H+A ++ NG ++TFG G +GRLGH +  N  V + + AL    ++ V+C
Sbjct: 192 NIKQISACGF-HTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVAC 250

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           G  HT  + + G  V+ +G GE+G+LG G+
Sbjct: 251 GGFHTAAVTESGH-VFTWGGGEHGQLGHGD 279



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG  H+A VT +G LYT+G G YG+LGHG       P  V ++  ++V  V+CG  HT
Sbjct: 91  VTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHT 150

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           V + +  + VY +GD E G  G G+T
Sbjct: 151 VVLLEN-QDVYTWGDKENGVSGHGDT 175



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           +YT+G G+ G+LG G T +   P  V AL       +SCG  HTV + D GK VY +G G
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGK-VYTWGRG 61

Query: 490 EYGKLGLGNTGLKPTPQ 506
           + G+LG G+ G K  P+
Sbjct: 62  DDGRLGHGDNGWKFVPR 78



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G    G++      G S P    +    Y   +ACG +H+ V+  N  +YT+G+ + G  
Sbjct: 111 GGGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVS 170

Query: 442 GHGTTMNWKV-PERVVALNKVHVESVS-CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           GHG T   +  P  V  L +++++ +S CG  HT  +++ G+ V+ FG+G++G+LG  + 
Sbjct: 171 GHGDTSGHQYSPYCVSELVEINIKQISACGF-HTAALSENGQ-VFTFGEGKFGRLGHNSE 228

Query: 500 GLKPTPQ 506
             +P  +
Sbjct: 229 RNQPVAK 235



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A ++   V IS G+ H + +++ G+V+ WG   D +LG G+      P+LV  L +K 
Sbjct: 28  VEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKK 87

Query: 69  IRQVSAGRSHSAAWTAP 85
           +RQV+ G  H+AA T  
Sbjct: 88  VRQVTCGSYHTAAVTVS 104



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 41/75 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A     I  ++ G  H  AV+ +G VF WG     QLG G+++N   P  V +L +KN
Sbjct: 237 IDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKN 296

Query: 69  IRQVSAGRSHSAAWT 83
           I Q++ G SH+ A T
Sbjct: 297 IIQLTCGWSHTVALT 311



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG+ H+  +T  G ++T+GNGD+G+LGH  T     P+ +   N   V SV+    HT
Sbjct: 300 LTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLIETFNSKRVISVASYNEHT 359

Query: 474 VCIAD 478
           V + +
Sbjct: 360 VALVN 364



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 42/78 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + +  + +I+ ++ G  H +A+++ G+VF WGN    +LG  +     EP+L+   ++K 
Sbjct: 289 VESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLIETFNSKR 348

Query: 69  IRQVSAGRSHSAAWTAPP 86
           +  V++   H+ A   P 
Sbjct: 349 VISVASYNEHTVALVNPD 366



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 40/73 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +   ++  +  ++ G+ H  AV+ +G+++ WG     +LG GN+  +  P LV ++  
Sbjct: 78  RLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGHSTPSLVESIKG 137

Query: 67  KNIRQVSAGRSHS 79
             +RQV+ G  H+
Sbjct: 138 LYVRQVACGSRHT 150



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +     I+I  IS    H  A+S  GQVF +G     +LG  ++ N    + + AL  K 
Sbjct: 185 VSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKR 244

Query: 69  IRQVSAGRSHSAAWT 83
           I+QV+ G  H+AA T
Sbjct: 245 IKQVACGGFHTAAVT 259



 Score = 42.0 bits (97), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 26/48 (54%)

Query: 36 VFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
          V+ WG   D QLGLG+  +   P LV AL ++   Q+S G  H+   T
Sbjct: 3  VYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLT 50



 Score = 38.5 bits (88), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALSNK 67
           + + K +++  ++ G+ H + +     V+ WG+  +   G G+   ++  P  V  L   
Sbjct: 132 VESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEI 191

Query: 68  NIRQVSAGRSHSAA 81
           NI+Q+SA   H+AA
Sbjct: 192 NIKQISACGFHTAA 205


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A VT  G +YT+G G++G+LGHG  +N  VP RV +L +  V  ++CG +HT
Sbjct: 248 VACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHT 307

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           V + D G+ VY +G+G++GKLG  +T
Sbjct: 308 VALTDTGE-VYTWGNGDHGKLGHNDT 332



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           IACG  H+ V+T  G +YT+G GD GRLGHG    WK VP  V  L   ++  V+CG  H
Sbjct: 39  IACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDN-GWKFVPRLVEELRGKNIRQVTCGSYH 97

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           T  +   G  +Y +G G YGKLG GN     TP
Sbjct: 98  TAAVTVSGD-LYTWGGGMYGKLGHGNETGHSTP 129



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           ACGF H+A ++  G ++TFG G +GRLGH +  N  V   V AL    V+ V+CG  HT 
Sbjct: 198 ACGF-HTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTA 256

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + G+ VY +G GE+G+LG G+   K  P
Sbjct: 257 AVTETGE-VYTWGGGEHGQLGHGDKVNKTVP 286



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG  H+A VT +G LYT+G G YG+LGHG       P  V  L  + V  V+CG  HT
Sbjct: 91  VTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHT 150

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           V + +  K VY +GD E G  G G+T
Sbjct: 151 VVLLEN-KDVYTWGDKENGVSGHGDT 175



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           +  TS +H P    A     IV I+ G+ H + +++ G+V+ WG   D +LG G+     
Sbjct: 16  LGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKF 75

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+LV  L  KNIRQV+ G  H+AA T
Sbjct: 76  VPRLVEELRGKNIRQVTCGSYHTAAVT 102



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           ++VP    + ++     I CG+ H+  +T  G +YT+GNGD+G+LGH  T    +P+ V 
Sbjct: 283 KTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVD 342

Query: 457 ALNKVHVESVSCGLNHTVCIAD 478
            L    V SV+    HTV + D
Sbjct: 343 VLEGKRVISVASYNEHTVALVD 364



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 1/77 (1%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           +Y++G G+ G+LG G T +   P  + AL +  +  ++CG  HTV + D+G+ VY +G G
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGE-VYTWGRG 61

Query: 490 EYGKLGLGNTGLKPTPQ 506
           + G+LG G+ G K  P+
Sbjct: 62  DDGRLGHGDNGWKFVPR 78



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + A     +  ++ G  H  AV+ TG+V+ WG     QLG G+++N   P  V +L  
Sbjct: 235 RFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVE 294

Query: 67  KNIRQVSAGRSHSAAWT 83
           K + Q++ G SH+ A T
Sbjct: 295 KLVVQITCGWSHTVALT 311



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 38/73 (52%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +   +  +I  ++ G+ H  AV+ +G ++ WG     +LG GN+  +  P LV  L  
Sbjct: 78  RLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLKG 137

Query: 67  KNIRQVSAGRSHS 79
             +RQV+ G  H+
Sbjct: 138 MQVRQVACGSRHT 150



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 37/69 (53%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V I+ G  H +A+++TG+V+ WGN    +LG  +      P+LV  L  K +  V++  
Sbjct: 297 VVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLEGKRVISVASYN 356

Query: 77  SHSAAWTAP 85
            H+ A   P
Sbjct: 357 EHTVALVDP 365



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +  +IV IS    H  A+S  G+VF +G     +LG  ++ N    + V AL+ K 
Sbjct: 185 VEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKR 244

Query: 69  IRQVSAGRSHSAAWT 83
           ++QV+ G  H+AA T
Sbjct: 245 VKQVACGGFHTAAVT 259



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 27/48 (56%)

Query: 36 VFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
          V++WG   D QLGLG+  +   P  + AL+ + I Q++ G  H+   T
Sbjct: 3  VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLT 50


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V++ +G +YT+G GD GRLGHG    WK VP  V AL    +   +CG  H
Sbjct: 45  VACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDN-GWKYVPRIVEALEGQRIVQATCGSYH 103

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           T  + DKG+ +Y +G G YGKLG GN    PTP
Sbjct: 104 TAAVTDKGE-LYTWGGGMYGKLGHGNESGHPTP 135



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 11/94 (11%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           ACGF H+A +T+ G ++T+G G +GRLGHG   N  VP  V AL    V  V+CG  H+ 
Sbjct: 206 ACGF-HTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSA 264

Query: 475 CIADKGK----------AVYAFGDGEYGKLGLGN 498
            I D G+           VY FG+G++GKLG G+
Sbjct: 265 AILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGD 298



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 46/85 (54%), Gaps = 3/85 (3%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK--VHVESVSCGLNHT 473
           CG  H+A VT  G LYT+G G YG+LGHG       P  V  L      V  ++CG  HT
Sbjct: 99  CGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHT 158

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           V + D GK VY +GD E G +G  N
Sbjct: 159 VVLTDLGK-VYTWGDKENGVVGHTN 182



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 428 GYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G +Y++G G+ G+LG G T +   P  V AL    V  V+CG  HTV +++ G AVY +G
Sbjct: 7   GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDG-AVYTWG 65

Query: 488 DGEYGKLGLGNTGLKPTPQ 506
            G+ G+LG G+ G K  P+
Sbjct: 66  RGDDGRLGHGDNGWKYVPR 84



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 11/102 (10%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYT-----------FGN 435
           GR+   +   Q VP      +      +ACG  HSA +  +G LYT           FGN
Sbjct: 229 GRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGN 288

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           GD+G+LGHG      VP  V  L K+HV  V+    HT  +A
Sbjct: 289 GDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALA 330



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K+  +V ++ G+ H + +S  G V+ WG   D +LG G+      P++V AL  + 
Sbjct: 34  VDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQR 93

Query: 69  IRQVSAGRSHSAAWT 83
           I Q + G  H+AA T
Sbjct: 94  IVQATCGSYHTAAVT 108



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + A +   IV  + G+ H  AV++ G+++ WG     +LG GN+  +  P +V  L +
Sbjct: 84  RIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRD 143

Query: 67  KNIR--QVSAGRSHSAAWT 83
           +  R  Q++ G  H+   T
Sbjct: 144 EGARVTQIACGSRHTVVLT 162



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + + +   +  ++    H  A++  G++F WG     +LG G + N   P++V AL  
Sbjct: 191 RMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMG 250

Query: 67  KNIRQVSAGRSHSAA 81
           K +  V+ G  HSAA
Sbjct: 251 KRVGHVACGGFHSAA 265



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 34 GQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
          G V++WG   D QLGLG+  +   P LV AL +K + QV+ G  H+
Sbjct: 7  GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHT 52



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNKNIRQVSAG 75
           +  I+ G+ H + +++ G+V+ WG+  +  +G  N   ++  P+++ +L  K + QV+A 
Sbjct: 148 VTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAAC 207

Query: 76  RSHSAAWTAP 85
             H+AA TA 
Sbjct: 208 GFHTAALTAA 217


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 58/92 (63%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A +T +G L+TFG+G +G+LGHG+T +  +P RV+ L    V  ++CG +HT
Sbjct: 246 ISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHT 305

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +        VYAFG   +G+LG G  G   +P
Sbjct: 306 LAFVPSSGVVYAFGCNSHGQLGTGILGDARSP 337



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +HS  +  +G +YT G+   G+LGH        PE V AL+   +  VSCG  H+
Sbjct: 38  VGCGGQHSVFLMHDGSVYTCGSNSCGQLGHDKA--GISPEVVGALDTQKITMVSCGRGHS 95

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + ++G+ ++A+G G+ G+LGLG T
Sbjct: 96  MAVNEQGQ-LFAWGAGDGGQLGLGTT 120



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  HS  V   G L+ +G GD G+LG GTT    ++P  V  L    +  V CG  H
Sbjct: 88  VSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQH 147

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            V ++  G+ ++ +G    G+LGLG
Sbjct: 148 CVALSRDGQ-LFTWGQNTSGQLGLG 171



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQL 60
           +G S   + A     I  +S G  H +AV+  GQ+FAWG     QLGLG  +   R P+L
Sbjct: 70  AGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRL 129

Query: 61  VLALSNKNIRQVSAGRSHSAA 81
           V  L +  I QV  G  H  A
Sbjct: 130 VKRLCDHRISQVMCGNQHCVA 150



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I  G  HS  ++ +G ++ +G    G+LG     +  VP  +  L    V  +SCG  
Sbjct: 192 AQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDE 251

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +   G  ++ FGDG +G+LG G+T  +  P+
Sbjct: 252 HTAALTKDG-GLFTFGDGSWGQLGHGSTNSELLPR 285



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           HI   ++  +V IS G EH  A++  G +F +G+ S  QLG G+  +   P+ VL L   
Sbjct: 234 HIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGT 293

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 294 EVSQIACGRHHTLAF 308



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + +   I +  I+ G +H  A+S +G VF WG N   QLGL ++ +   P  +  L ++ 
Sbjct: 183 LKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQK 242

Query: 69  IRQVSAGRSHSAAWT 83
           +  +S G  H+AA T
Sbjct: 243 VVYISCGDEHTAALT 257



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALSNKNIRQVSAG 75
           I  +  G +H +A+S  GQ+F WG N+  QLGLG  + +   P  + +L+   + Q++AG
Sbjct: 138 ISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAG 197

Query: 76  RSHSAA 81
             HS A
Sbjct: 198 GDHSFA 203



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R+   F    + ++  G +H + + + G V+  G+NS  Q  LG+      P++V AL  
Sbjct: 25 RNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCGQ--LGHDKAGISPEVVGALDT 82

Query: 67 KNIRQVSAGRSHSAA 81
          + I  VS GR HS A
Sbjct: 83 QKITMVSCGRGHSMA 97


>gi|449465846|ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
 gi|449516435|ref|XP_004165252.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 491

 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 376 PLECFEGASW-TGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFG 434
           P+ C E +S+   R   +  G  S+    +     Y   IACG +HSA VT  G L TFG
Sbjct: 280 PIPCIESSSFGKDRSAALARGSASLEGQGSRIPGSYVKGIACGGRHSAAVTDAGALLTFG 339

Query: 435 NGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL 494
            G YG+ G G T +   P  V +L  + +ESV+ GL HTVCI+  G  +Y+FG  ++G+L
Sbjct: 340 WGLYGQCGQGCTDDELSPTCVSSLLGIRIESVAAGLWHTVCISSDGD-IYSFGGNQFGQL 398

Query: 495 GLGNTGLKPTPQ 506
           G G    +  P+
Sbjct: 399 GTGADQAETLPR 410



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 3/101 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-- 457
           P   ++ L     ++A G  H+  ++S+G +Y+FG   +G+LG G      +P  + A  
Sbjct: 357 PTCVSSLLGIRIESVAAGLWHTVCISSDGDIYSFGGNQFGQLGTGADQAETLPRLLDAPS 416

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           +  V+ + VSCG  H+  +++ GK V+ +G  +YG+LGLG+
Sbjct: 417 VENVNAKVVSCGARHSAIVSEDGK-VFCWGWNKYGQLGLGD 456



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSA+V+ +G ++ +G   YG+LG G  ++  +P   V +   + ++V+CG  HT
Sbjct: 425 VSCGARHSAIVSEDGKVFCWGWNKYGQLGLGDVIDRNIPVE-VPMENCNSKNVACGWWHT 483

Query: 474 VCIADK 479
           + +A+ 
Sbjct: 484 LLLAES 489



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           P+ +N++   +S G  H   VS  G+VF WG N   QLGLG+ I+   P + + + N N 
Sbjct: 415 PSVENVNAKVVSCGARHSAIVSEDGKVFCWGWNKYGQLGLGDVIDRNIP-VEVPMENCNS 473

Query: 70  RQVSAGRSHS 79
           + V+ G  H+
Sbjct: 474 KNVACGWWHT 483



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 26/40 (65%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
            + I  +S G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 233 GVRITSVSAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRI 272



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   I I  ++ G  H + +S+ G ++++G N   QLG G       P+L+ A  + N
Sbjct: 360 VSSLLGIRIESVAAGLWHTVCISSDGDIYSFGGNQFGQLGTGADQAETLPRLLDAPSVEN 419

Query: 67  KNIRQVSAGRSHSA 80
            N + VS G  HSA
Sbjct: 420 VNAKVVSCGARHSA 433


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG+ H+  +  +G +Y+FG  DYG+LGHG   +   P  + AL K H   V+CG  H
Sbjct: 260 SLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQVTCGCYH 319

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           T+ +++ GK VY FG   +G+LGLGN     +PQ
Sbjct: 320 TLVLSEDGK-VYPFGRNNHGQLGLGNLIDCTSPQ 352



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 64/102 (62%), Gaps = 5/102 (4%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VPLT+ N       A+ACG  H+ V  +NG +  FG  D+G+LG G T+++     ++A 
Sbjct: 194 VPLTYFNSRPVL--AVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAA 251

Query: 458 -LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            L+ + V S++CG  HT+ +A+ G +VY+FG  +YG+LG G+
Sbjct: 252 PLDSLVVPSLACGYYHTIALAEHG-SVYSFGRNDYGQLGHGH 292



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 6/113 (5%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
           G   PI T     P    +   Y+   +AC + H+ V+T  G LY FG  D G+LG    
Sbjct: 133 GSTNPITT-----PTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDG 187

Query: 447 MNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           M+  VP  +   N   V +V+CG +HTV     G  V AFG  ++G+LG G T
Sbjct: 188 MDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNG-GVVAFGKNDHGQLGTGYT 239



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A    H V ++ G  H L +S  G+V+ +G N+  QLGLGN I+   PQ++ +L +K 
Sbjct: 302 IKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKF 361

Query: 69  IRQVSAGRSHSAAWTA 84
           + +V++G  HS   TA
Sbjct: 362 VVKVASGFYHSICLTA 377



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           VP      + +  +A  C  +H   ++ +G LYTFG    G+LGHG+T     P ++  L
Sbjct: 90  VPALVTEDIAHIRSANGC--EHLTAISRSGALYTFGFNSRGQLGHGSTNPITTPTKIKDL 147

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
              HV  V+C   HT+ +  +G  +YAFG  + G+LG+ +
Sbjct: 148 ASYHVVEVACSYFHTIVMTMEG-TLYAFGRNDLGQLGIDD 186



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 39/70 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG  H+ V++ +G +Y FG  ++G+LG G  ++   P+ + +L    V  V+ G  H+
Sbjct: 313 VTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFVVKVASGFYHS 372

Query: 474 VCIADKGKAV 483
           +C+     +V
Sbjct: 373 ICLTATKNSV 382



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 7/109 (6%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL- 458
           P++F + ++  +  +ACG + +A +   G ++T G  D G+ G G+T   +    V AL 
Sbjct: 37  PISFCHNVKILD--VACGNEQTAFLFETGDVFTCGYNDSGQCGIGSTSRVQSLRLVPALV 94

Query: 459 --NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             +  H+ S + G  H   I+  G A+Y FG    G+LG G+T    TP
Sbjct: 95  TEDIAHIRSAN-GCEHLTAISRSG-ALYTFGFNSRGQLGHGSTNPITTP 141



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 36/60 (60%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G  H +A++  G V+++G N   QLG G++ +  EP L+ AL+  +  QV+ G  H+
Sbjct: 261 LACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQVTCGCYHT 320



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 431 YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490
           Y+FG   YG L H  T++  +P  +   + V +  V+CG   T  + + G  V+  G  +
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGD-VFTCGYND 72

Query: 491 YGKLGLGNT 499
            G+ G+G+T
Sbjct: 73  SGQCGIGST 81



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 33/67 (49%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I    N+ I+D++ G E    +  TG VF  G N   Q G+G+    +  +LV AL  ++
Sbjct: 38  ISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQCGIGSTSRVQSLRLVPALVTED 97

Query: 69  IRQVSAG 75
           I  + + 
Sbjct: 98  IAHIRSA 104


>gi|403354995|gb|EJY77059.1| hypothetical protein OXYTRI_01309 [Oxytricha trifallax]
          Length = 875

 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG  H+  VTSNG  Y++G G YG LG G  +N + P  +  L  + +  VSCG  HT
Sbjct: 80  VSCGDNHTVAVTSNGECYSWGQGIYGALGIGQVLNRQKPTLIEELRDIKIVKVSCGARHT 139

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           + +A+ G+ VY+ GDGE G+LGLG
Sbjct: 140 LFLANNGE-VYSCGDGEKGQLGLG 162



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 10/99 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +H+  + +NG +Y+ G+G+ G+LG G       P++V   +   ++ +  G  H+
Sbjct: 132 VSCGARHTLFLANNGEVYSCGDGEKGQLGLGCFKKQLFPKKV---DTASIQEICGGELHS 188

Query: 474 V-------CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +        I D+   V+ FG  E G+LG+G+ G +  P
Sbjct: 189 LFLTQTMGSIIDELGMVWVFGLNEKGELGVGDYGKRIHP 227



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 38/64 (59%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
            IVD+S G  H +AV++ G+ ++WG      LG+G  +N ++P L+  L +  I +VS G
Sbjct: 76  QIVDVSCGDNHTVAVTSNGECYSWGQGIYGALGIGQVLNRQKPTLIEELRDIKIVKVSCG 135

Query: 76  RSHS 79
             H+
Sbjct: 136 ARHT 139



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 26/42 (61%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG 50
           I   ++I IV +S G  H L ++N G+V++ G+    QLGLG
Sbjct: 121 IEELRDIKIVKVSCGARHTLFLANNGEVYSCGDGEKGQLGLG 162


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 2044

 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 1/93 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +++ GF H A V +NG L T+G G+ G+LGHG T N   P+ + +L    +  V CG  H
Sbjct: 808 SVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKH 867

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           T+C+   GK VY++G  EYG+LGLG+     +P
Sbjct: 868 TICLTKNGK-VYSWGASEYGQLGLGDVTQHSSP 899



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 1/96 (1%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T  Q  P    +   ++   + CG KH+  +T NG +Y++G  +YG+LG G       P 
Sbjct: 841 TNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPM 900

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           +V AL K +V  ++ G  H   +    K V  FG+G
Sbjct: 901 QVSALEKYNVLQIASGSTHCAVLT-TSKEVLVFGNG 935



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG   +A +T  G +YT+G G    LGHG       P+ + AL    +  +SCG  HT
Sbjct: 961  LCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHT 1018

Query: 474  VCIADKGKAVYAFGDGEYGKLG 495
              + D G+ ++  G   +G+LG
Sbjct: 1019 AFLTDSGR-IFTCGKDSFGQLG 1039



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 41/75 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +  +  I  +  G +H + ++  G+V++WG +   QLGLG+   +  P  V AL   N
Sbjct: 850 IQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYN 909

Query: 69  IRQVSAGRSHSAAWT 83
           + Q+++G +H A  T
Sbjct: 910 VLQIASGSTHCAVLT 924



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 1/69 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I+CG +H+A +T +G ++T G   +G+LG  +    K P+R+ +L K    SVSCG N+ 
Sbjct: 1011 ISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNK-PKRIESLTKTTFISVSCGENYN 1069

Query: 474  VCIADKGKA 482
            V + D  ++
Sbjct: 1070 VALFDTTRS 1078



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +P+ K +HI  +  G     A++  G V+ WG  +  +LG G       P+L+ AL N++
Sbjct: 950  VPSLKYLHIDRLCCGHYSTAAITECGDVYTWG--TGQELGHGGNSTETSPKLIEALRNQS 1007

Query: 69   IRQVSAGRSHSAAWT 83
            IRQ+S G  H+A  T
Sbjct: 1008 IRQISCGGRHTAFLT 1022



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 7/125 (5%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           GAS  G++        S P+  +   +Y    IA G  H AV+T++  +  FGNG    +
Sbjct: 881 GASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNG--AAM 938

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGL 501
           G  + ++  +P  V +L  +H++ + CG   T  I + G  VY +G G+  +LG G    
Sbjct: 939 GAASVVS--LPTLVPSLKYLHIDRLCCGHYSTAAITECGD-VYTWGTGQ--ELGHGGNST 993

Query: 502 KPTPQ 506
           + +P+
Sbjct: 994 ETSPK 998



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S+G  H  AV   G++  WG   + QLG G+  N  EP+++ +L++  I QV  G 
Sbjct: 806 VVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGE 865

Query: 77  SHSAAWT 83
            H+   T
Sbjct: 866 KHTICLT 872


>gi|195168454|ref|XP_002025046.1| GL26838 [Drosophila persimilis]
 gi|194108491|gb|EDW30534.1| GL26838 [Drosophila persimilis]
          Length = 828

 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 4/107 (3%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T  ++VP T  N L     A+ CG  +SA +T +G LYT+G G Y RLGHG + +  +P 
Sbjct: 231 THARAVP-TKINSLDRCVKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPT 289

Query: 454 RVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            V+AL +  +  V+ G    H++C+  +G  VYA+GD +YGKLG GN
Sbjct: 290 VVMALTEHEIIDVALGSGDAHSLCLTSEGH-VYAWGDADYGKLGNGN 335



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 2/90 (2%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVC 475
           C  +H   +  N   Y++GNG+  RLGHG T    VP ++ +L++  V++V CG +++  
Sbjct: 201 CEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKINSLDRC-VKAVFCGCSYSAA 259

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I   G  +Y +G G Y +LG GN+  +P P
Sbjct: 260 ITCSGN-LYTWGRGTYARLGHGNSDDQPLP 288



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL---GLGNQINYREPQLVLA 63
           R I   ++  IVD++VG  H LA+S+ G+VF WG N   Q+    + ++   R P LV A
Sbjct: 395 RLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQICPSSVSSEPLLRVPILV-A 453

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L       V+   S S  WT
Sbjct: 454 LPTLPASGVACTASQSLIWT 473



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           +  + A+  G  HS  +TS G++Y +G+ DYG+LG+G       P  V +L K  V+ V 
Sbjct: 298 EIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPK--VQRVF 355

Query: 468 CGLNHTVCIADKGKAVYAFGDG 489
            G   ++ +   G+ +Y++G  
Sbjct: 356 AGAQFSMALTTDGQ-LYSWGKA 376



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A     I+D+++G+   H L +++ G V+AWG+    +LG GN      P LV +L  
Sbjct: 291 VMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESL-- 348

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V AG   S A T
Sbjct: 349 PKVQRVFAGAQFSMALT 365


>gi|428182233|gb|EKX51094.1| hypothetical protein GUITHDRAFT_150990 [Guillardia theta CCMP2712]
          Length = 402

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 1/101 (0%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           QS P    +    +   +A G  H A ++  G++YT+G GDYG+LGHG   +   P +V 
Sbjct: 60  QSRPFMLKSMQSIFVFDVAVGVSHCAALSREGHVYTWGCGDYGKLGHGGLWDVAQPRQVQ 119

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           ALNK     ++CG NHT+ + D    ++ +GDG YG+LG G
Sbjct: 120 ALNKRRCIQIACGANHTLALTDN-SMLWTWGDGRYGQLGHG 159



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 6/87 (6%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVHVESVSC 468
           IACG  H+  +T N  L+T+G+G YG+LGHGT  +  +P +V+         + V  V C
Sbjct: 129 IACGANHTLALTDNSMLWTWGDGRYGQLGHGTWQDCGLPCKVLNPESARQEHLKVRWVGC 188

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G + T  I  + + +  +G+G +G+LG
Sbjct: 189 GDDFTAAITSENRML-TWGNGWHGQLG 214



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 42/75 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + ++I + D++VG  H  A+S  G V+ WG     +LG G   +  +P+ V AL+ + 
Sbjct: 66  LKSMQSIFVFDVAVGVSHCAALSREGHVYTWGCGDYGKLGHGGLWDVAQPRQVQALNKRR 125

Query: 69  IRQVSAGRSHSAAWT 83
             Q++ G +H+ A T
Sbjct: 126 CIQIACGANHTLALT 140



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVS-NTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           + +   +++ +  I+ G+ HVLA S +  +V++WG     +LG G   +  EP+LV  L 
Sbjct: 308 QQVHLLRDVEVSKIACGSRHVLAYSADPPRVWSWGEGEGNKLGHGTCFDQYEPKLVQELE 367

Query: 66  NKNIRQVSAGRSHSA 80
            K +  ++ G   SA
Sbjct: 368 GKTVSSMTCGSMWSA 382



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 14/102 (13%)

Query: 405 NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
           NRL+ YE  + C           GY  +    D GR    +     +P++V  L  V V 
Sbjct: 274 NRLKVYEGKMRCNL---------GYSPSSSTADDGRARARS-----LPQQVHLLRDVEVS 319

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            ++CG  H +  +     V+++G+GE  KLG G    +  P+
Sbjct: 320 KIACGSRHVLAYSADPPRVWSWGEGEGNKLGHGTCFDQYEPK 361


>gi|222619534|gb|EEE55666.1| hypothetical protein OsJ_04066 [Oryza sativa Japonica Group]
          Length = 418

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 1/131 (0%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C E A ++      + G +S  +  +  +     AIACG +HSAVVT +G L TFG 
Sbjct: 208 PIPCIESALYSKDRPAAMKGNKSAEVQISKVMGNCVKAIACGGRHSAVVTDSGALLTFGW 267

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G T +   P  V ++  V ++ +  GL HTVC +  G  VY+FG  ++G+LG
Sbjct: 268 GLYGQCGQGNTDDVLSPTCVSSILGVKMQDIGAGLWHTVCTSVDGD-VYSFGGNQFGQLG 326

Query: 496 LGNTGLKPTPQ 506
            G+   +  P+
Sbjct: 327 TGSDQAETVPK 337



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 3/108 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-- 457
           P   ++ L      I  G  H+   + +G +Y+FG   +G+LG G+     VP+ V A  
Sbjct: 284 PTCVSSILGVKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASS 343

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L   +  +VSCG  H+  I D+G+ V+ +G  +YG+LGLG++  +  P
Sbjct: 344 LENKNARAVSCGARHSAIITDEGE-VFCWGWNKYGQLGLGDSMDRNVP 390



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 397 QSVP-LTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           ++VP L  A+ L+   A A++CG +HSA++T  G ++ +G   YG+LG G +M+  VP  
Sbjct: 333 ETVPKLVDASSLENKNARAVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCS 392

Query: 455 VVALNKVHVESVSCGLNHTVCIADK 479
            V ++  H  +VSCG  HT+ +A+ 
Sbjct: 393 -VPVDAYHPLNVSCGWWHTLVLAES 416



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   + + DI  G  H +  S  G V+++G N   QLG G+      P+LV A  L N
Sbjct: 287 VSSILGVKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASSLEN 346

Query: 67  KNIRQVSAGRSHSA 80
           KN R VS G  HSA
Sbjct: 347 KNARAVSCGARHSA 360



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
           + I+ ++ G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 162 VKIMAVAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRI 200


>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Strongylocentrotus purpuratus]
          Length = 782

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGLN 471
           +++CG  H+A +T  G++YTFGNG  G+LGHG   +   +P+RV  L     + VSCG  
Sbjct: 241 SVSCGNAHTAAITEKGHVYTFGNGASGQLGHGPDHLETNIPKRVARLEWTRCKWVSCGDC 300

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           HT  +  KG  +Y FGDG +GKLG G 
Sbjct: 301 HTAIVTAKG-CLYTFGDGRHGKLGQGE 326



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 406 RLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVH 462
           RL++     ++CG  H+A+VT+ G LYTFG+G +G+LG G     N   P +V   N   
Sbjct: 286 RLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGKLGQGEESFSNVFTPSKVHRFNGFL 345

Query: 463 VESVSCGLNHTVCIA 477
           VE VSCG  HT+  A
Sbjct: 346 VEEVSCGGCHTLVRA 360



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 418 FKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           F    V+T NG LY FG  D+G+LG G   +   P  V  L    V  ++CG  HT+ + 
Sbjct: 39  FFFDVVITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALT 98

Query: 478 DKGKAVYAFGDGEYGKLGLGNT 499
            K + +++FG G  G+LG+G++
Sbjct: 99  -KDRHLHSFGAGGEGQLGVGDS 119



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H+  +T + +L++FG G  G+LG G +  ++ P  +  L +     +SCG +H+
Sbjct: 87  IACGRVHTIALTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLSCGTDHS 146

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G  +Y +G G  G+LG G 
Sbjct: 147 AALTASG-TLYMWGGGSEGQLGHGE 170



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 52/135 (38%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE--------RVVALNKVH--- 462
           ++CG  HSA +T++G LY +G G  G+LGHG     ++P         R+V+    H   
Sbjct: 139 LSCGTDHSAALTASGTLYMWGGGSEGQLGHGEDTEVQIPRELSMGVPVRMVSCGYYHTAL 198

Query: 463 ----------------------------------------VESVSCGLNHTVCIADKGKA 482
                                                   V+SVSCG  HT  I +KG  
Sbjct: 199 LTEDKKLYTFGEGEGGKLGLGEAHLGGVNEPQHVSFFTEPVDSVSCGNAHTAAITEKGH- 257

Query: 483 VYAFGDGEYGKLGLG 497
           VY FG+G  G+LG G
Sbjct: 258 VYTFGNGASGQLGHG 272



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   K+  +V I+ G  H +A++    + ++G   + QLG+G+   Y  P+++  L  ++
Sbjct: 76  VKGLKHAGVVKIACGRVHTIALTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQD 135

Query: 69  IRQVSAGRSHSAAWTA 84
              +S G  HSAA TA
Sbjct: 136 YLLLSCGTDHSAALTA 151



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLALS 65
           R I   +    + +S GT+H  A++ +G ++ WG  S+ QLG G     + P +L + + 
Sbjct: 126 RMIEELEEQDYLLLSCGTDHSAALTASGTLYMWGGGSEGQLGHGEDTEVQIPRELSMGVP 185

Query: 66  NKNIRQVSAGRSHSAAWT 83
              +R VS G  H+A  T
Sbjct: 186 ---VRMVSCGYYHTALLT 200



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLALSNKNIRQVSAG 75
           +  +S G  H  A++  G V+ +GN +  QLG G + +    P+ V  L     + VS G
Sbjct: 239 VDSVSCGNAHTAAITEKGHVYTFGNGASGQLGHGPDHLETNIPKRVARLEWTRCKWVSCG 298

Query: 76  RSHSAAWTA 84
             H+A  TA
Sbjct: 299 DCHTAIVTA 307


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 54/92 (58%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A +T  G L+TFGNG  G+LGH +T N  +P RV+ L    V  ++CG NHT
Sbjct: 247 ISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +        +YAFG    G+LG G  G   +P
Sbjct: 307 LAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSP 338



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 3/84 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG +HS  +  +G +YT G+   G+LGH        PE V AL+   +  VSCG  H+
Sbjct: 39  VACGNQHSLFLLHDGSVYTCGSNSCGQLGHDK--GGSRPELVGALDAQKISGVSCGQAHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           + + ++G+ V+A+G G+ G+LGLG
Sbjct: 97  LAVNEQGQ-VFAWGAGDGGQLGLG 119



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 5/98 (5%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGL 470
           + ++CG  HS  V   G ++ +G GD G+LG GT     +VP  +  L +  +  V CG 
Sbjct: 87  SGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGN 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN---TGLKPTP 505
           +H + ++  G+ ++ +G+   G+LGLG    + L P P
Sbjct: 147 HHCIALSKDGQ-LFVWGENSSGQLGLGKGEPSTLSPQP 183



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           HI   ++  +V IS G EH  A++  G +F +GN S  QLG  +  N   P+ V+ L   
Sbjct: 235 HIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGT 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR+H+ A+
Sbjct: 295 EVSQIACGRNHTLAF 309



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 39/69 (56%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I +  IS G +H  A+S +G VF WG NS  QLGL ++ +   P  +  L ++ +  +S 
Sbjct: 190 IPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISC 249

Query: 75  GRSHSAAWT 83
           G  H+AA T
Sbjct: 250 GEEHTAALT 258



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALSNKNIRQVSAG 75
           I  +S G  H LAV+  GQVFAWG     QLGLG  +   R P+L+  L    I QV  G
Sbjct: 86  ISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCG 145

Query: 76  RSHSAA 81
             H  A
Sbjct: 146 NHHCIA 151



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 8/124 (6%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALS 65
           R I       I  +  G  H +A+S  GQ+F WG NS  QLGLG  + +   PQ + +L 
Sbjct: 129 RLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLC 188

Query: 66  NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGL--PQD--IPDHYGHLQNKPLP 121
              + Q+SAG  HS A +         G   +S+ +LGL   QD  +P H   L+++ + 
Sbjct: 189 GIPLTQISAGGDHSFALS---FSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVV 245

Query: 122 LIRA 125
            I  
Sbjct: 246 YISC 249



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  ++ +G ++ +G    G+LG     +  VP  +  L    V  +SCG  HT
Sbjct: 195 ISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  ++ FG+G  G+LG  +T  +P P+
Sbjct: 255 AALTKEG-GLFTFGNGSKGQLGHDSTRNEPLPR 286



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F    + +++ G +H L + + G V+  G+NS  Q  LG+      P+LV AL  
Sbjct: 26 RSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQ--LGHDKGGSRPELVGALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          + I  VS G++HS A
Sbjct: 84 QKISGVSCGQAHSLA 98



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 8/111 (7%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG----TTMNWKVPER 454
           VP       ++  + + CG  H   ++ +G L+ +G    G+LG G    +T++   P+ 
Sbjct: 127 VPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLS---PQP 183

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +L  + +  +S G +H+  ++  G AV+ +G    G+LGL +   +  P
Sbjct: 184 LKSLCGIPLTQISAGGDHSFALSFSG-AVFGWGKNSAGQLGLNDEQDRAVP 233


>gi|260832219|ref|XP_002611055.1| hypothetical protein BRAFLDRAFT_276868 [Branchiostoma floridae]
 gi|229296425|gb|EEN67065.1| hypothetical protein BRAFLDRAFT_276868 [Branchiostoma floridae]
          Length = 846

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 28/211 (13%)

Query: 205 TKSKQTVKPIFAQISRQVVKM----KGSDLRLPSRA---WKVKLLGEGADDAGGVFDDTI 257
           TK  +    IF QI   +       K  + R PS+    W+ K L EG  D GG F D++
Sbjct: 472 TKDPECKHAIFTQIYEGLKPRDKYEKPLNYRWPSKYDQWWECKFLSEGIIDQGGGFRDSL 531

Query: 258 TEMCGELLSG------AVPLLVRTPNGVADTG-YNRDRYILNPDLSESLQSLMHFKFLGI 310
           +++  EL         A+P  VR+PN V DT   NRD Y+ NP  +E       ++++G+
Sbjct: 532 SDLAAELCPCSADAPVALPFFVRSPNQVEDTSNVNRDVYVPNPSCTE----FAKYEWIGM 587

Query: 311 LFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEAN 370
           L G  +R K+ L L L    WK +V E VT+   +D  ++ +  ++ +  I    + + +
Sbjct: 588 LMGACLRGKENLVLDLPAFTWKRLVGEKVTWA--QDYISVDSSEVKLLESIESISLDKTS 645

Query: 371 FPEIIPLECFEGASWTGRITPIVTGGQSVPL 401
           F +   +E     +WT     +++ GQ+V L
Sbjct: 646 FDQNFGVE----LTWTT----VISNGQTVSL 668


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 62/95 (65%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT--TMNWKVPERVVALNKVHVESVSCGLN 471
           ++CG +H+A++  NG ++TFG G++G+LG G   T N   P  V AL   HV+ V+CG +
Sbjct: 44  VSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWH 103

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  + D G+ +Y +G GEYG+LG G+   + +P+
Sbjct: 104 HTCALIDNGQ-LYTWGSGEYGRLGHGDEVRQASPK 137



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG+ H+  +  NG LYT+G+G+YGRLGHG  +    P+ V +L    V  V+ G  H+
Sbjct: 98  VACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHS 157

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             I + G  +  +G G +G+LG G+   + TP+
Sbjct: 158 SVIIEGGN-LLTWGGGYFGQLGHGDETDRKTPK 189



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS+V+   G L T+G G +G+LGHG   + K P+ V  + +     V+CG +HT
Sbjct: 150 VAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHT 209

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +    + V+ +G GE+GKLG+G+      P
Sbjct: 210 LMLTQS-QEVWTWGSGEFGKLGIGDEEKHAEP 240



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           +Y++G G  G+LGHG     + P  VVA    +V  VSCG  HT  + + G+ V+ FG G
Sbjct: 8   VYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGE-VFTFGRG 66

Query: 490 EYGKLGLG 497
            +G+LG G
Sbjct: 67  NFGQLGQG 74



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+ ++T +  ++T+G+G++G+LG G       P  + AL  V V  +S G  H+
Sbjct: 202 VACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHS 261

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             +  +G  +Y +G G+ G+LG G+   +  P
Sbjct: 262 AALTSEG-VLYTWGGGDKGQLGHGDENSQNIP 292



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 41/72 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A +  H+  ++ G  H  A+ + GQ++ WG+    +LG G+++    P+LV +L  K 
Sbjct: 87  VSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKE 146

Query: 69  IRQVSAGRSHSA 80
           +  V+AG  HS+
Sbjct: 147 VTFVAAGGFHSS 158



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 41/69 (59%)

Query: 19  DISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSH 78
           +++ GT H L ++ + +V+ WG+    +LG+G++  + EP ++ AL    +  +S G  H
Sbjct: 201 EVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFH 260

Query: 79  SAAWTAPPL 87
           SAA T+  +
Sbjct: 261 SAALTSEGV 269



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLAL 64
           R + AF   ++  +S G +H   +   G+VF +G  +  QLG G  +  N   P LV AL
Sbjct: 31  RLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSAL 90

Query: 65  SNKNIRQVSAGRSHSAA 81
             K+++QV+ G  H+ A
Sbjct: 91  QGKHVKQVACGWHHTCA 107



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 30/46 (65%)

Query: 35 QVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSA 80
          +V++WG     QLG G++   R+P+LV+A    N+RQVS G  H+A
Sbjct: 7  EVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTA 52


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVC 475
           CG +HSA V   G+LY +G GDYGRLG G  +   VP +V  + +     V CG NHTV 
Sbjct: 273 CGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIRE--ASQVVCGFNHTVV 330

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           ++  G+ V++FG  E GKLG G+T  +  P+
Sbjct: 331 LSTDGRTVWSFGAAENGKLGHGDTNRQFRPK 361



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           HS  +  NG ++T+G+GDYG+LGHG +   K P+ + AL    +    CG  H+  + D 
Sbjct: 225 HSMAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDA 284

Query: 480 GKAVYAFGDGEYGKLGLGNTGLKPTP 505
           G  +Y +G+G+YG+LGLG+   +  P
Sbjct: 285 GH-LYMWGEGDYGRLGLGDALQRSVP 309



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           ++DI++G  HV+A++  G VF WGNN + Q G G+ +  Y  PQ+V  L    I+QV+AG
Sbjct: 422 VIDIAIGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAG 481

Query: 76  RSHSAAWTAPPLPPH 90
            +H+  W+A P   H
Sbjct: 482 TTHTFVWSAAPCEEH 496



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP---ERVVALNKVHVESVSCG 469
           +I  G   +  V SNG +   G G YGRLG+G + +   P   E    + K+     S G
Sbjct: 165 SITAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG 224

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             H++ I   G+ ++ +GDG+YGKLG G++  + +P+
Sbjct: 225 --HSMAIGKNGQ-IWTWGDGDYGKLGHGDSTTQKSPK 258



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 2/77 (2%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           + CGF H+ V++++G  +++FG  + G+LGHG T     P+ + AL  + +  ++ G   
Sbjct: 321 VVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQI 380

Query: 473 TVCIADKGKAVYAFGDG 489
           +  +  +G A+Y +G G
Sbjct: 381 SAAVTREG-ALYVWGFG 396



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 32/56 (57%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAA 81
           H +A+   GQ++ WG+    +LG G+    + P+L+ AL+++ I     G  HSAA
Sbjct: 225 HSMAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAA 280


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 60/84 (71%), Gaps = 2/84 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+AV++  G LYTFG+G +G+LG+G + +   +P++V  L++   + VSCG NH
Sbjct: 247 VACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGL 496
           T  I +KG A+Y FGDG +GKLG+
Sbjct: 307 TAVITEKG-AMYTFGDGRHGKLGI 329



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +HSA++T +G LYTFG+ D+G+LG G       P  V +L +  V  V+CG +HT
Sbjct: 41  ISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHT 100

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +     G+ +Y+FG G  G+LG G+     +PQ
Sbjct: 101 IVCTKAGR-LYSFGAGSDGQLGTGDAQCATSPQ 132



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 4/86 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++CG+ H+A+VT +G LYTFG  ++G+LG       +   P+ V ++ +  ++ V+CG  
Sbjct: 194 VSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITE-KIKLVACGGA 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HT  I+D G  +Y FGDG +G+LG G
Sbjct: 253 HTAVISDVGN-LYTFGDGMHGQLGNG 277



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 7/93 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH--VESVSCGLN 471
           ++ G  HSA +T++G LY +G+G  G+LG G T + + P+ +    K H  V  VSCG  
Sbjct: 144 LSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKEL----KFHSSVSWVSCGYY 199

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           HT  + D GK +Y FG+ E+GKLGL    L+ T
Sbjct: 200 HTAIVTDDGK-LYTFGEKEFGKLGLTEDQLEDT 231



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+ V T  G LY+FG G  G+LG G       P+ ++ L +   + +S G +H+
Sbjct: 93  VACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQ-LINLPEQKYKLLSAGTDHS 151

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +   G  +Y +G G  G+LGLGNT    TP+
Sbjct: 152 AALTTDG-TLYMWGSGSEGQLGLGNTDSVETPK 183



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 40/71 (56%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           +N   + IS G EH   ++ +G+++ +G+N   QLGLG+     +P  V +L  + +  V
Sbjct: 34  RNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLV 93

Query: 73  SAGRSHSAAWT 83
           + GRSH+   T
Sbjct: 94  ACGRSHTIVCT 104



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + K   +  ++ G  H +  +  G+++++G  SD QLG G+      PQL+  L  + 
Sbjct: 82  VKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLI-NLPEQK 140

Query: 69  IRQVSAGRSHSAAWT 83
            + +SAG  HSAA T
Sbjct: 141 YKLLSAGTDHSAALT 155



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           +S GT+H  A++  G ++ WG+ S+ QLGLGN  +   P+ +   S  ++  VS G  H+
Sbjct: 144 LSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHS--SVSWVSCGYYHT 201

Query: 80  A 80
           A
Sbjct: 202 A 202



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLG 442
           S+P   A   ++    ++CG  H+AV+T  G +YTFG+G +G+LG
Sbjct: 284 SLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLG 328


>gi|145519203|ref|XP_001445468.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412923|emb|CAK78071.1| unnamed protein product [Paramecium tetraurelia]
          Length = 3895

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 78/317 (24%), Positives = 136/317 (42%), Gaps = 31/317 (9%)

Query: 112  YGHLQNKPLPLIR---ARLKLLNRFSDLIYQVVRL-LPLGNVDQDWVQCTPYSWLVHPSL 167
            Y  L N PL +IR   A +KL NR+ +   Q + + +P+G   Q        S   +  +
Sbjct: 3393 YQDLVNSPLLVIRQSWAIIKLFNRYLETCGQFINMDVPIGTSQQFQQNTILLSMGNYMQV 3452

Query: 168  RPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRR---------------LTTKSKQTVK 212
                      + +V+ V     + ++  P + V R               L T + + +K
Sbjct: 3453 LRQLCMTPTKVDIVQRVLNKTSISRDSPPKINVERIRLANRNGKANQQDFLFTMAYEQMK 3512

Query: 213  PIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
             I   + R + K +G+D   P  A++V   GE      G +     ++  EL S ++ LL
Sbjct: 3513 NIPPTLLRPI-KPQGTD---PFLAFEVNFKGEDVQGESGPYRQFFADISKELQSSSL-LL 3567

Query: 273  VRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWK 332
              + N  A  G ++D+++LNP  + S   L  +++LG+L  +AIRT     L L  + WK
Sbjct: 3568 YPSTNNQAKLGNHKDKFVLNPS-ARSNYYLHLYEYLGVLMAIAIRTATHFSLDLPSIFWK 3626

Query: 333  LIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPI 392
             IV E +TF D+E  D      +  +++   S   E  F   + L   +       +  +
Sbjct: 3627 QIVGEKITFEDIEQIDATMCNLINFMQECPESTFEENIFENWVTLRTDKS------VQEL 3680

Query: 393  VTGGQSVPLTFANRLQY 409
               G  +P+ +  RL+Y
Sbjct: 3681 KENGSKIPVKYEERLEY 3697


>gi|218189368|gb|EEC71795.1| hypothetical protein OsI_04422 [Oryza sativa Indica Group]
          Length = 427

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 1/131 (0%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C E A ++      + G +S     +  +     AIACG +HSAVVT +G L TFG 
Sbjct: 217 PIPCIESALYSKDRPAAMKGNKSAEAQISKVMGNCVKAIACGGRHSAVVTDSGALLTFGW 276

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G T +   P  V ++  V ++ +  GL HTVC +  G  VY+FG  ++G+LG
Sbjct: 277 GLYGQCGQGNTDDVLSPTCVSSILGVKMQDIGAGLWHTVCTSVDGD-VYSFGGNQFGQLG 335

Query: 496 LGNTGLKPTPQ 506
            G+   +  P+
Sbjct: 336 TGSDQAETVPK 346



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           I  G  H+   + +G +Y+FG   +G+LG G+     VP+ V A  L   +  +VSCG  
Sbjct: 307 IGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASSLENKNARAVSCGAR 366

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H+  I D+G+ V+ +G  +YG+LGLG++  +  P
Sbjct: 367 HSAIITDEGE-VFCWGWNKYGQLGLGDSMDRNVP 399



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 397 QSVP-LTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           ++VP L  A+ L+   A A++CG +HSA++T  G ++ +G   YG+LG G +M+  VP  
Sbjct: 342 ETVPKLVDASSLENKNARAVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCS 401

Query: 455 VVALNKVHVESVSCGLNHTVCIADK 479
            V ++  H  +VSCG  HT+ +A+ 
Sbjct: 402 -VPVDAYHPLNVSCGWWHTLVLAES 425



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   + + DI  G  H +  S  G V+++G N   QLG G+      P+LV A  L N
Sbjct: 296 VSSILGVKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASSLEN 355

Query: 67  KNIRQVSAGRSHSA 80
           KN R VS G  HSA
Sbjct: 356 KNARAVSCGARHSA 369



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
           + I+ ++ G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 171 VKIMAVAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRI 209


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 101/190 (53%), Gaps = 15/190 (7%)

Query: 324  LPLSPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE---- 378
            LP + +VW L  +E +      +     ++Q++  +R IH++G +++ F  I+  +    
Sbjct: 2639 LPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLF--IVSQDGKVY 2696

Query: 379  -CFEGASWTGRITPIVTGGQSVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGN 435
             C EG +  GR+   VT    +P       QY   + A+  G KH+  +T +G ++++G 
Sbjct: 2697 ACGEGTN--GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGE 2754

Query: 436  GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            G+ G+LGHG       P  V AL    +  V+CG +H+  I+ +G+ +Y +G GEYG+LG
Sbjct: 2755 GEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGE-LYTWGLGEYGRLG 2813

Query: 496  LGN--TGLKP 503
             G+  T LKP
Sbjct: 2814 HGDNTTQLKP 2823



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            +ACG  HSA ++S G LYT+G G+YGRLGHG       P+ V AL    V  V+CG    
Sbjct: 2785 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDA 2844

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             T+ + + G AV+++GDG++GKLG G +    TP 
Sbjct: 2845 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPH 2878



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T  ++VP   A   Q+   ++ CG  +SA +T  G L T+G G Y RLGHG + +  +P 
Sbjct: 307 THARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPT 366

Query: 454 RVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            VVAL+   V  V+ G    H++ +  +G  V+A+GDG+YGKLG GN 
Sbjct: 367 LVVALSDHMVVDVALGSGDAHSLALTSEG-LVFAWGDGDYGKLGNGNC 413



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG + S  +T  G ++T+G GDY RLGHG   + + P+ +  L    V  V+ G  H 
Sbjct: 2891 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHC 2950

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G GNT +   P
Sbjct: 2951 LAVTDAGQ-VYAWGDNDHGQQGSGNTFVNKKP 2981



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   +   ++ ++VG  H LAV++ GQV+AWG+N   Q G GN    ++P LV+ L    
Sbjct: 2932 IGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF 2991

Query: 69   IRQVSAGRSHSAAWTAP 85
            + +V+ G SHS AW  P
Sbjct: 2992 VNRVACGSSHSIAWGLP 3008



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVC 475
           C  +H   + SN   Y++G G+  RLGHG T    VP ++ AL +  V+SV CG +++  
Sbjct: 277 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 336

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I   G  +  +G G Y +LG GN+  +  P
Sbjct: 337 ITCGGN-LLTWGRGTYARLGHGNSDDRSLP 365



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            V +  G +H LA++  G+VF+WG   D +LG GN+    +P+LV AL  K IR V+ G S
Sbjct: 2731 VAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSS 2790

Query: 78   HSAA 81
            HSAA
Sbjct: 2791 HSAA 2794



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T +G ++++G+GD+G+LG G +     P  +  L+ + V  + CG  
Sbjct: 2837 VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQ 2896

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++ +   G+ V+ +G G+Y +LG G       PQ
Sbjct: 2897 FSLALTRAGE-VWTWGKGDYYRLGHGGDQHVRKPQ 2930



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R + A +   I D++ G+ H  A+S+ G+++ WG     +LG G+     +P+LV AL+ 
Sbjct: 2772 RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAG 2831

Query: 67   KNIRQVSAG 75
            + + QV+ G
Sbjct: 2832 RRVVQVACG 2840



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G G T   K P  V+ L+ V V  V+CG +H+
Sbjct: 2943 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 3002

Query: 474  V 474
            +
Sbjct: 3003 I 3003



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G  HS  +TS G ++ +G+GDYG+LG+G       P  V +L +  V+ V  G 
Sbjct: 378 DVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRVFAGS 435

Query: 471 NHTVCIADKGKAVYAFG 487
             +V ++ +G+ +Y +G
Sbjct: 436 QFSVALSSEGQ-LYTWG 451



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 36/76 (47%)

Query: 8    HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
             I     I +V I  G +  LA++  G+V+ WG     +LG G   + R+PQ +  L  +
Sbjct: 2879 EIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR 2938

Query: 68   NIRQVSAGRSHSAAWT 83
             +  V+ G  H  A T
Sbjct: 2939 RVIHVAVGALHCLAVT 2954



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 27/41 (65%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
           R + + ++  IVD++V   H LA+S++G+VF WG N   Q+
Sbjct: 472 RLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 512



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A  +  +VD+++G+   H LA+++ G VFAWG+    +LG GN     +P LV +L  
Sbjct: 368 VVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL-- 425

Query: 67  KNIRQVSAGRSHSAAWTA 84
             +++V AG   S A ++
Sbjct: 426 PRVQRVFAGSQFSVALSS 443



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A +   +  +  G  +  A++  G +  WG  + A+LG GN  +   P LV+ALS+  
Sbjct: 316 IAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHM 375

Query: 69  IRQVS--AGRSHSAAWTAPPL 87
           +  V+  +G +HS A T+  L
Sbjct: 376 VVDVALGSGDAHSLALTSEGL 396


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 4/118 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL---YTFGNGDY 438
           G ++ G++    T  +SVP    +        ++C + H+ +   +G L   YTFG  DY
Sbjct: 673 GYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDY 732

Query: 439 GRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
           G+LGH  +++ K+P+ V AL+   + SV+CG  HT+ +   GKA +AFG  +YG+LG+
Sbjct: 733 GQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKA-FAFGKNDYGQLGI 789



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLN 471
           ++ACG  H+ VVT++G  + FG  DYG+LG  T  N   P +V   L +     + CG  
Sbjct: 759 SVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYY 818

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           HT+ +   G  ++AFG  +YG+LGLG +    T
Sbjct: 819 HTIALC-SGAHLFAFGRNDYGQLGLGRSNASST 850



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 14/123 (11%)

Query: 396 GQSVPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-----TTMNW 449
            Q  P+     L+  E   I CG+ H+  + S  +L+ FG  DYG+LG G     +T N 
Sbjct: 794 NQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNL 853

Query: 450 KVPER-------VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           ++ ++       +  L    +  ++CG  HT+ ++D G  +Y FG   +G+LG G+T  +
Sbjct: 854 QLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNG-VMYVFGRNNHGQLGTGDTTER 912

Query: 503 PTP 505
             P
Sbjct: 913 VYP 915



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)

Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
           G +H+ +V+++G + T G    G+LGHG T +  VP+ + +L    V  VSC   HTV  
Sbjct: 656 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 715

Query: 477 ADKG--KAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + G  + +Y FG  +YG+LG  ++  +  PQ
Sbjct: 716 CEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQ 747



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           +++ G   YG LGHG T + K  ER+ AL +  +  +  G  HTV +   GK V+  G  
Sbjct: 564 VWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGK-VFTCGYN 622

Query: 490 EYGKLGLGNTG 500
           + G+ G G T 
Sbjct: 623 DNGQCGQGGTA 633



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 32/63 (50%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H+  V+ NG +Y FG  ++G+LG G T     P  +       V  V+ G  HT
Sbjct: 877 IACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHT 936

Query: 474 VCI 476
           V +
Sbjct: 937 VVL 939



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query: 23  GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           G EH + VS  G+V   G N   QLG GN  +   P+++ +L NK +R VS    H+
Sbjct: 656 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHT 712



 Score = 41.6 bits (96), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 39/80 (48%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           ++ R I   +   IV I+ G  H +AVS+ G ++ +G N+  QLG G+      P  +  
Sbjct: 861 SNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDD 920

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
              K +  V+AG  H+   T
Sbjct: 921 FVGKRVALVAAGFYHTVVLT 940



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)

Query: 7   RHIPAF----KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLV 61
           R IP F     +  IV ++ G  H + V+ +G+ FA+G N   QLG+    N   P Q+ 
Sbjct: 743 RKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVR 802

Query: 62  LALSNKNIRQVSAGRSHSAA 81
             L  +   ++  G  H+ A
Sbjct: 803 GGLERQECLEIRCGYYHTIA 822


>gi|168016500|ref|XP_001760787.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688147|gb|EDQ74526.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 445

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIACG +HSA+VT  G L TFG G YG++G G+  +   P  V A+  + V  ++ GL H
Sbjct: 272 AIACGGRHSAIVTDAGALLTFGWGLYGQVGQGSNEDELSPCLVSAMGGLQVTGIAAGLWH 331

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           T+CI D G  VYAFG  ++G+LG+G    + +P+
Sbjct: 332 TLCITDIGD-VYAFGGNQFGQLGVGGNSAEMSPR 364



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 37/62 (59%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A+ACG +HS V+T +G ++ +G   YG+LG G   N  +P +V   +     +++CG  H
Sbjct: 378 AVACGARHSVVLTGSGKIFAWGWNKYGQLGLGDNNNRDLPVQVTMNDGGRAANIACGWWH 437

Query: 473 TV 474
           T+
Sbjct: 438 TL 439



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + A   + +  I+ G  H L +++ G V+A+G N   QLG+G       P+L+ A  L +
Sbjct: 314 VSAMGGLQVTGIAAGLWHTLCITDIGDVYAFGGNQFGQLGVGGNSAEMSPRLIDAPLLED 373

Query: 67  KNIRQVSAGRSHS 79
           ++   V+ G  HS
Sbjct: 374 ESCVAVACGARHS 386



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 35/72 (48%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           P  ++   V ++ G  H + ++ +G++FAWG N   QLGLG+  N   P  V        
Sbjct: 369 PLLEDESCVAVACGARHSVVLTGSGKIFAWGWNKYGQLGLGDNNNRDLPVQVTMNDGGRA 428

Query: 70  RQVSAGRSHSAA 81
             ++ G  H+ A
Sbjct: 429 ANIACGWWHTLA 440


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 3/94 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
            IACG  HSA + SNG LYT+G G+YGRLGHG T+    P+ V AL    V  V+CG    
Sbjct: 2733 IACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDA 2792

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             T+ +   G  VY++GDG++GKLG G +    TP
Sbjct: 2793 QTMALTTDG-CVYSWGDGDFGKLGRGGSDGCYTP 2825



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL--N 471
           IACG  +SA ++++G LYT+G G+YGRLGHG   +   P  V  L    V  V+CG   +
Sbjct: 204 IACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDS 263

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+C+   G  V+++GDG+YGKLG G T    TP+
Sbjct: 264 QTLCVTASG-IVFSWGDGDYGKLGRGGTDGSKTPK 297



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 91/166 (54%), Gaps = 16/166 (9%)

Query: 350  LYAQSLRAIRDIHLSGVTEANFPEIIPLE-----CFEGASWTGRI----TPIVTGGQSVP 400
            +Y++ L  ++ IH++G ++  F  I+  E     C EG +  GR+       V   +++P
Sbjct: 2614 IYSEVLSKLKPIHIAGGSKTLF--IVSQEGKLYACGEGTN--GRLGLGDDNNVCEPKAIP 2669

Query: 401  LTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
              F ++    + A+  G KH+  +T +G ++++G G+ G+LGHG  ++   P+ +  L  
Sbjct: 2670 --FLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKS 2727

Query: 461  VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              +  ++CG  H+  IA  G+ +Y +G GEYG+LG G+T  +  P+
Sbjct: 2728 KRIRDIACGSGHSAAIASNGE-LYTWGLGEYGRLGHGDTITQTRPK 2772



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 53/80 (66%), Gaps = 1/80 (1%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           KH   +T +G +Y++GNGD GRLGHG T+++  P+ + +L   ++  ++CG  ++  ++ 
Sbjct: 157 KHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAALSA 216

Query: 479 KGKAVYAFGDGEYGKLGLGN 498
            G+ +Y +G G YG+LG GN
Sbjct: 217 SGE-LYTWGRGNYGRLGHGN 235



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   +   I+ ++VG  H LAV++TGQV+AWG+N   Q G G     R+P LV  L +  
Sbjct: 2880 VEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLVHDLEDAR 2939

Query: 69   IRQVSAGRSHSAAWTAPPLPPH 90
            + +VS G SHS AW     P +
Sbjct: 2940 VNRVSCGSSHSIAWVLVDQPSN 2961



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            + CG + S  +T  G ++T+G GDY RLGHG   + + P  V  L    +  V+ G  H 
Sbjct: 2839 VECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHC 2898

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 2899 LAVTDTGQ-VYAWGDNDHGQQGNGATSVNRKP 2929



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)

Query: 7    RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
            + IP      I  ++V  G +H LA++  G+VF+WG   D +LG GN I+  +P+L+  L
Sbjct: 2666 KAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEIL 2725

Query: 65   SNKNIRQVSAGRSHSAA 81
             +K IR ++ G  HSAA
Sbjct: 2726 KSKRIRDIACGSGHSAA 2742



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T G   P      L      + CG + SA +T++G +YT+G GD  RLGHG+  + + P+
Sbjct: 290 TDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPK 349

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL 494
            + +L    ++ +S G  H + + +  + VY +G  +YG++
Sbjct: 350 VIESLRDKKIKDLSVGTTHILALTED-QFVYGWGRNDYGQI 389



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            +ACG +   +  +T++G +Y++G+GD+G+LG G +     P  V  LN + V  V CG  
Sbjct: 2785 VACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQ 2844

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++ +   G+ V+ +G G+Y +LG GN
Sbjct: 2845 FSLALTKYGE-VWTWGKGDYFRLGHGN 2870



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSA--VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG   S    VT++G ++++G+GDYG+LG G T   K P+ V  L  ++V  V CG  
Sbjct: 256 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQ 315

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +  +   G+ VY +G G+  +LG G+
Sbjct: 316 FSAALTAHGE-VYTWGKGDAYRLGHGS 341



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 46/72 (63%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           K I ++      +H LA++  G V++WGN    +LG G+ ++Y EP+L+ +L +KNI  +
Sbjct: 145 KPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFI 204

Query: 73  SAGRSHSAAWTA 84
           + G ++SAA +A
Sbjct: 205 ACGSTYSAALSA 216



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   K+  I DI+ G+ H  A+++ G+++ WG     +LG G+ I    P+LV AL  + 
Sbjct: 2722 IEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQR 2781

Query: 69   IRQVSAG 75
            + QV+ G
Sbjct: 2782 VVQVACG 2788



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 4/85 (4%)

Query: 3   GTSGRHIPA----FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
           GT G   P       +I++V +  G +   A++  G+V+ WG     +LG G++ + R P
Sbjct: 289 GTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYP 348

Query: 59  QLVLALSNKNIRQVSAGRSHSAAWT 83
           +++ +L +K I+ +S G +H  A T
Sbjct: 349 KVIESLRDKKIKDLSVGTTHILALT 373



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG--LGNQINYREPQLVLALSN 66
           I + ++  I D+SVGT H+LA++    V+ WG N   Q+   LG  ++  EP L   LS+
Sbjct: 351 IESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQIDPTLGPVVS--EPTLCPTLSS 408

Query: 67  KNIRQVSAGRSHSAAW 82
           K +  +++G + S AW
Sbjct: 409 KTVIGLASGPTQSFAW 424



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 33/61 (54%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            +A G  H   VT  G +Y +G+ D+G+ G+G T   + P  V  L    V  VSCG +H+
Sbjct: 2891 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLVHDLEDARVNRVSCGSSHS 2950

Query: 474  V 474
            +
Sbjct: 2951 I 2951



 Score = 45.1 bits (105), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 3    GTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            G+ G + P        + ++ +  G +  LA++  G+V+ WG     +LG GN  + R+P
Sbjct: 2818 GSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP 2877

Query: 59   QLVLALSNKNIRQVSAGRSHSAAWT 83
             LV  L  K I  V+ G  H  A T
Sbjct: 2878 TLVEGLRGKKIIHVAVGALHCLAVT 2902



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +   K   +V ++ G+     L V+ +G VF+WG+    +LG G     + P++V  L +
Sbjct: 245 VTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLD 304

Query: 67  KNIRQVSAGRSHSAAWTA 84
            N+ +V  G   SAA TA
Sbjct: 305 INVVKVFCGGQFSAALTA 322



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 37/71 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +  + +IV I+ G+ +  A+S +G+++ WG  +  +LG GN  +   P LV  L    
Sbjct: 193 IESLLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHT 252

Query: 69  IRQVSAGRSHS 79
           +  V+ G   S
Sbjct: 253 VVHVACGSGDS 263



 Score = 38.5 bits (88), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   K IHI     G++ +  VS  G+++A G  ++ +LGLG+  N  EP+ +  LS   
Sbjct: 2619 LSKLKPIHIAG---GSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFV 2675

Query: 69   IRQVS--AGRSHSAAWT 83
            I++V+  +G  H+ A T
Sbjct: 2676 IKKVAVHSGGKHALALT 2692


>gi|290980486|ref|XP_002672963.1| predicted protein [Naegleria gruberi]
 gi|284086543|gb|EFC40219.1| predicted protein [Naegleria gruberi]
          Length = 591

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 24/180 (13%)

Query: 324 LPLSPLVWKLIVQE----PVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLEC 379
            PL P  + L V++    P   T +E   T +   L   RD  +  + +A F ++   + 
Sbjct: 116 FPLRPFGYSLKVEDTVIPPYKITKIE---TRFKHCLILTRDGFVYSIGDAEFGKL--GDG 170

Query: 380 FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYG 439
           +E +  TG   P V      P+   +R       IA G  HSA+VT  G ++TFG G YG
Sbjct: 171 YEDS--TGTKAPFVRK----PVLIMDRA----IDIAVGKHHSAIVTDEGNVHTFGYGKYG 220

Query: 440 RLGHGTTMNWKVPERVVA--LNK-VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
           +LGH    N  VP RVV   +N+ + +  V+CG +HT+C+ D G  VY FG+G  G+LG+
Sbjct: 221 QLGHSNFENENVP-RVVEDFINRDIRITKVACGDHHTICLTDTG-LVYGFGNGSQGQLGV 278



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 4/101 (3%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVP-ERVVALNKVHVES 465
           Y    I   FKH  ++T +G++Y+ G+ ++G+LG G   +   K P  R   L       
Sbjct: 135 YKITKIETRFKHCLILTRDGFVYSIGDAEFGKLGDGYEDSTGTKAPFVRKPVLIMDRAID 194

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           ++ G +H+  + D+G  V+ FG G+YG+LG  N   +  P+
Sbjct: 195 IAVGKHHSAIVTDEGN-VHTFGYGKYGQLGHSNFENENVPR 234



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 5/72 (6%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN---QINYREPQLVL--ALSNK 67
           +NI +VD+S G+ H+  ++   +VFA G N + QLG+GN   Q    E   +L  AL ++
Sbjct: 464 QNIKLVDVSCGSSHLFCMTVDQRVFAAGLNFNGQLGIGNKTSQCRLFEVTNLLPHALVSE 523

Query: 68  NIRQVSAGRSHS 79
            I+Q+  G +++
Sbjct: 524 GIKQIICGTNYT 535



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)

Query: 18  VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR--QVSAG 75
           +DI+VG  H   V++ G V  +G     QLG  N  N   P++V    N++IR  +V+ G
Sbjct: 193 IDIAVGKHHSAIVTDEGNVHTFGYGKYGQLGHSNFENENVPRVVEDFINRDIRITKVACG 252

Query: 76  RSHSAAWT 83
             H+   T
Sbjct: 253 DHHTICLT 260


>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
 gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
          Length = 611

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG+ H+A+VT +G +YTFG  DYG+LG G  ++   P  V +L+++ +  V+CG  HT
Sbjct: 283 LSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHT 342

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + ++D GK V+ FG   +G+LGL  +    +PQ
Sbjct: 343 LALSDDGK-VFPFGRNNHGQLGLETSMDCLSPQ 374



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 3/93 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + +   + I  ++ G  H LA+S+ G+VF +G N+  QLGL   ++   PQL+  L NK 
Sbjct: 324 VESLSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQLGLETSMDCLSPQLISTLRNK- 382

Query: 69  IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLR 101
              V+AG  HS      P   + P +T S  LR
Sbjct: 383 --PVAAGFYHSVCLVGTPKSENPPPYTLSGDLR 413



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +AC + H+A+V  NG L+  G  DYG+LG G      VP  V    +  V +V+CG ++T
Sbjct: 177 VACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYT 236

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           V     G  V AFG  ++G+LGL
Sbjct: 237 VASLRDG-GVVAFGKNDHGQLGL 258



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 5/97 (5%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           A+ACG  ++     +G +  FG  D+G+LG    +    +P R+   L++  V  +SCG 
Sbjct: 228 AVACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTRLAPPLDRAVVPQLSCGY 287

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTP 505
           +HT  + + G AVY FG  +YG+LGLG+     +PTP
Sbjct: 288 HHTAIVTEDG-AVYTFGRNDYGQLGLGHKLHMARPTP 323



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
           G +H A + +NG+LYT G    G+LG GT         V  L    V  V+C   HT  +
Sbjct: 128 GSEHLAALCANGFLYTVGFNMRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIV 187

Query: 477 ADKGKAVYAFGDGEYGKLGLGN 498
            D G  ++A G  +YG+LG+G+
Sbjct: 188 MDNGD-LHACGCNDYGQLGMGD 208



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 38/77 (49%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R  P      +  +S G  H   V+  G V+ +G N   QLGLG++++   P  V +LS 
Sbjct: 270 RLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSR 329

Query: 67  KNIRQVSAGRSHSAAWT 83
             I QV+ G  H+ A +
Sbjct: 330 MRITQVACGCYHTLALS 346



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 3/69 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+  ++ +G ++ FG  ++G+LG  T+M+   P+ +  L     + V+ G  H+
Sbjct: 335 VACGCYHTLALSDDGKVFPFGRNNHGQLGLETSMDCLSPQLISTLRN---KPVAAGFYHS 391

Query: 474 VCIADKGKA 482
           VC+    K+
Sbjct: 392 VCLVGTPKS 400



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 9/116 (7%)

Query: 7   RHIPAFKNIHIVDI--SVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           R  P   + H V +    G+EH+ A+   G ++  G N   QLGLG      E  LV  L
Sbjct: 110 RFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNMRGQLGLGTATTVTEATLVEEL 169

Query: 65  SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPL 120
           + K +  V+    H+ A        H  G      L +G      DH GHL  +P+
Sbjct: 170 AGKRVVDVACSYFHT-AIVMDNGDLHACGCNDYGQLGMG------DHSGHLVPRPV 218



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKV----HVESVSCGLNHTVCIADKGKAVYA 485
           L++FG   YG L  G T +   P R V L ++    HV  V+CG   T  + + G  V+ 
Sbjct: 32  LFSFGQNTYGELALGDTNDRSTPTR-VDLGRINDTKHVVDVACGNEQTTILFENGD-VFT 89

Query: 486 FGDGEYGKLGLGNTGLKPT 504
            G  + G+  +G T   P+
Sbjct: 90  CGYNDSGQCAIGTTERVPS 108


>gi|297816858|ref|XP_002876312.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297322150|gb|EFH52571.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 482

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 3/131 (2%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C E +S+    +  V    S  +  A  L  Y   IACG +HSAV+T  G L TFG 
Sbjct: 274 PIPCIEPSSYGKATSSGVN--MSSEVQCARVLGSYVKKIACGGRHSAVITDTGALLTFGW 331

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G+T +   P  V +L  + +E V+ GL HT+C +  G  VY+FG  ++G+LG
Sbjct: 332 GLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTICASADGD-VYSFGGNQFGQLG 390

Query: 496 LGNTGLKPTPQ 506
            G    +  P+
Sbjct: 391 TGCDQAETLPK 401



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-- 457
           P   ++ L      +A G  H+   +++G +Y+FG   +G+LG G      +P+ + A  
Sbjct: 348 PTCVSSLLGIRIEEVAAGLWHTICASADGDVYSFGGNQFGQLGTGCDQAETLPKLLEAPN 407

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           L  V+V+ +SCG  HT  IAD+GK V+ +G  +YG+LGLG+
Sbjct: 408 LENVNVKIISCGARHTAVIADEGK-VFCWGWNKYGQLGLGD 447



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
             P  +N+++  IS G  H   +++ G+VF WG N   QLGLG+ I+   P  V
Sbjct: 404 EAPNLENVNVKIISCGARHTAVIADEGKVFCWGWNKYGQLGLGDVIDRNAPSEV 457



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
           + IV ++ G  H LA+S+ GQV+ WG   + QLGLG+++
Sbjct: 228 VRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRV 266



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   I I +++ G  H +  S  G V+++G N   QLG G       P+L+ A  L N
Sbjct: 351 VSSLLGIRIEEVAAGLWHTICASADGDVYSFGGNQFGQLGTGCDQAETLPKLLEAPNLEN 410

Query: 67  KNIRQVSAGRSHSA 80
            N++ +S G  H+A
Sbjct: 411 VNVKIISCGARHTA 424



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+   G ++ +G   YG+LG G  ++   P  V   + V  ++++CG  HT
Sbjct: 416 ISCGARHTAVIADEGKVFCWGWNKYGQLGLGDVIDRNAPSEVRIKDCVP-KNIACGWWHT 474

Query: 474 V 474
           +
Sbjct: 475 L 475


>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
          Length = 516

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVC 475
           CG +HSA V   G+LY +G GDYGRLG G  +   VP +V  + +     V CG NHTV 
Sbjct: 273 CGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIRE--ASQVVCGFNHTVV 330

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           ++  G+ V++FG  E GKLG G+T  +  P+
Sbjct: 331 LSTDGRTVWSFGAAENGKLGHGDTNRQFRPK 361



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           HS  +  NG ++T+G+GDYG+LGHG +   K P+ + AL    +    CG  H+  + D 
Sbjct: 225 HSIAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDA 284

Query: 480 GKAVYAFGDGEYGKLGLGNTGLKPTP 505
           G  +Y +G+G+YG+LGLG+   +  P
Sbjct: 285 GH-LYMWGEGDYGRLGLGDALQRSVP 309



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           ++DI+VG  HV+A++  G VF WGNN + Q G G+ +  Y  PQ+V  L    I+QV+AG
Sbjct: 422 VIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAG 481

Query: 76  RSHS 79
            +H+
Sbjct: 482 TTHT 485



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 10/109 (9%)

Query: 401 LTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP---ERVVA 457
           L+   ++    A   C F     V SNG +   G G YGRLG+G + +   P   E    
Sbjct: 157 LSVYGKVMSMTAGQYCTF----AVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAP 212

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + K+     S G  H++ I   G+ ++ +GDG+YGKLG G++  + +P+
Sbjct: 213 VRKILTSKGSDG--HSIAIGKNGQ-IWTWGDGDYGKLGHGDSTTQKSPK 258



 Score = 45.1 bits (105), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 2/77 (2%)

Query: 414 IACGFKHSAVVTSNG-YLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           + CGF H+ V++++G  +++FG  + G+LGHG T     P+ + AL  + +  ++ G   
Sbjct: 321 VVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQI 380

Query: 473 TVCIADKGKAVYAFGDG 489
           +  +  +G A+Y +G G
Sbjct: 381 SAAVTREG-ALYVWGFG 396



 Score = 45.1 bits (105), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 32/56 (57%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAA 81
           H +A+   GQ++ WG+    +LG G+    + P+L+ AL+++ I     G  HSAA
Sbjct: 225 HSIAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAA 280


>gi|255586057|ref|XP_002533695.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526406|gb|EEF28690.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 478

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 372 PEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRL-QYYEAAIACGFKHSAVVTSNGYL 430
           P +IP  C + ++     + IV  G   P   A+     Y   IACG +HSA+VT  G L
Sbjct: 267 PHLIP--CIDASASGKDRSLIVHQGNLTPSAQASTFPGSYVKEIACGGRHSAIVTDTGAL 324

Query: 431 YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490
            TFG G YG+ G GTT +   P  V AL+ + V S++ GL HTVCI+  G  VY FG  +
Sbjct: 325 LTFGWGLYGQCGQGTTNDQLRPACVPALSGIKVISIAAGLWHTVCISADGH-VYTFGGNQ 383

Query: 491 YGKLGLGNTGLKP 503
           +G+LG      +P
Sbjct: 384 FGQLGTDTDQTEP 396



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 5/89 (5%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGL 470
           +IA G  H+  ++++G++YTFG   +G+L  GT  +   P+++ A  L   H + VSCG 
Sbjct: 359 SIAAGLWHTVCISADGHVYTFGGNQFGQL--GTDTDQTEPKQLYAPSLGSKHAKIVSCGA 416

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            H+  + + G+ VY++G  +YG+LGLG++
Sbjct: 417 RHSAVLTEDGQ-VYSWGWNKYGQLGLGDS 444



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 44/65 (67%), Gaps = 1/65 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAV+T +G +Y++G   YG+LG G +++  +P + V +     ++++CG  HT
Sbjct: 412 VSCGARHSAVLTEDGQVYSWGWNKYGQLGLGDSIDRNIPSQ-VPIEGYRPKNIACGWWHT 470

Query: 474 VCIAD 478
           + +A+
Sbjct: 471 LLLAE 475



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           +PA   I ++ I+ G  H + +S  G V+ +G N   QLG     +  EP+ + A  L +
Sbjct: 349 VPALSGIKVISIAAGLWHTVCISADGHVYTFGGNQFGQLG--TDTDQTEPKQLYAPSLGS 406

Query: 67  KNIRQVSAGRSHSAAWT 83
           K+ + VS G  HSA  T
Sbjct: 407 KHAKIVSCGARHSAVLT 423



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLV 61
            + I +++ G  H LA+S+ GQV+ WG   + QLGLG++I     P L+
Sbjct: 222 GVRITNVAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRIKMVSSPHLI 270



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           + P+  + H   +S G  H   ++  GQV++WG N   QLGLG+ I+   P  V
Sbjct: 400 YAPSLGSKHAKIVSCGARHSAVLTEDGQVYSWGWNKYGQLGLGDSIDRNIPSQV 453


>gi|355694459|gb|AER99676.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 93

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  +SA +T+ G LYT+G G+YGRLGHG++ +  +P  V  L  + V  V+CG    
Sbjct: 5   IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 64

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            T+ + + G+ V+++GDG+YGKLG G +
Sbjct: 65  QTLAVTENGQ-VWSWGDGDYGKLGRGGS 91


>gi|413951961|gb|AFW84610.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 588

 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 1/131 (0%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C E A +T      + G ++     +  L     AIACG +HSAVVT +G L TFG 
Sbjct: 378 PVPCIESALYTKDRPSAMKGNKAAEGHVSKVLGNCVRAIACGGRHSAVVTDSGALLTFGW 437

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G T +   P  V ++  + ++ V+ GL HTVC +  G  VY+FG  ++G+LG
Sbjct: 438 GLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAGLWHTVCTSVDGD-VYSFGGNQFGQLG 496

Query: 496 LGNTGLKPTPQ 506
            G+   +  P+
Sbjct: 497 TGSDQAETLPK 507



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           +A G  H+   + +G +Y+FG   +G+LG G+     +P+ V A  L   +  SVSCG  
Sbjct: 468 VAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETLPKLVDATSLENKNARSVSCGAR 527

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  I D+G+ V+ +G  +YG+LGLG++
Sbjct: 528 HSAIITDEGE-VFCWGWNKYGQLGLGDS 554



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 2/79 (2%)

Query: 401 LTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           L  A  L+   A +++CG +HSA++T  G ++ +G   YG+LG G +M+  VP   V ++
Sbjct: 508 LVDATSLENKNARSVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCS-VRVD 566

Query: 460 KVHVESVSCGLNHTVCIAD 478
             H  +VSCG  HT+ +A+
Sbjct: 567 AYHPLNVSCGWWHTLVLAE 585



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   I + D++ G  H +  S  G V+++G N   QLG G+      P+LV A  L N
Sbjct: 457 VSSILGIKMQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETLPKLVDATSLEN 516

Query: 67  KNIRQVSAGRSHSA 80
           KN R VS G  HSA
Sbjct: 517 KNARSVSCGARHSA 530



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 27/39 (69%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
           + IV ++ G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 332 VKIVAVAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRI 370



 Score = 38.9 bits (89), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 30/121 (24%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-----WKVP---------ERVVAL 458
           A+A G +H+  ++  G ++ +G G  G+LG G+ +        VP         +R  A+
Sbjct: 336 AVAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAM 395

Query: 459 --NKVH-----------VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKP 503
             NK             V +++CG  H+  + D G A+  FG G YG+ G GNT   L P
Sbjct: 396 KGNKAAEGHVSKVLGNCVRAIACGGRHSAVVTDSG-ALLTFGWGLYGQCGQGNTDDVLSP 454

Query: 504 T 504
           T
Sbjct: 455 T 455


>gi|118375248|ref|XP_001020809.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila]
 gi|89302576|gb|EAS00564.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila
           SB210]
          Length = 4058

 Score = 80.1 bits (196), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 6/102 (5%)

Query: 405 NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHV 463
           +R+Q+    I+CG  H A V+ +G LYT+G G  G+LGH   MN  +P  V + L +  V
Sbjct: 315 SRIQF----ISCGANHCAAVSLSGKLYTWGQGIQGQLGHQNVMNLSIPTAVKSELQEKKV 370

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             VSCG  HTVC+ ++G A Y+FG+ + G+LGLG+   +  P
Sbjct: 371 VYVSCGGAHTVCLTNEGYA-YSFGNNKNGQLGLGDQEQRNVP 411



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)

Query: 398 SVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           S+P    + LQ  +   ++CG  H+  +T+ GY Y+FGN   G+LG G      VP ++ 
Sbjct: 356 SIPTAVKSELQEKKVVYVSCGGAHTVCLTNEGYAYSFGNNKNGQLGLGDQEQRNVPVKIQ 415

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
            L    + +V CG+N+T  +   GK ++A G  ++ KLGL
Sbjct: 416 KLQNYFIVNVVCGMNNTFILTQVGK-IFACGSNQHNKLGL 454



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 2/84 (2%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNH 472
            I C  +HSA +  +G LYT+G G  G+LG     N  +P+RV   L + ++  VSCG+ H
Sbjct: 2390 IDCQAQHSAAIQLDGKLYTWGQGLNGQLGINAQSNMLLPQRVGGILEQKNITQVSCGVFH 2449

Query: 473  TVCIADKGKAVYAFGDGEYGKLGL 496
              CI + G   Y +G    G+LGL
Sbjct: 2450 MACITNDG-FCYTWGSNTNGQLGL 2472



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 5/94 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           IA G+++   + +   +Y +G    G+LG G T  + + P+ V+ L    +++++CG NH
Sbjct: 662 IAAGYEYCMAIENKRLVYAWGRNTDGQLGIGKTQYYVESPQMVLGLEGNLMKAIACGENH 721

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG---NTGLKP 503
           T+ + D G+ VY+ G  + GKLGLG   NT L+P
Sbjct: 722 TLFLTDTGQ-VYSCGSSKDGKLGLGNRTNTQLQP 754



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 3/63 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALSNKNIRQVSAGRSH 78
           I+ G  H L +++TGQV++ G++ D +LGLGN+ N + +PQL+  LS   + Q+S G+SH
Sbjct: 715 IACGENHTLFLTDTGQVYSCGSSKDGKLGLGNRTNTQLQPQLITNLS--KVEQISCGQSH 772

Query: 79  SAA 81
           S A
Sbjct: 773 SMA 775



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNKNIRQ 71
           +N  I  I+ G E+ +A+ N   V+AWG N+D QLG+G    Y E PQ+VL L    ++ 
Sbjct: 655 ENRRITYIAAGYEYCMAIENKRLVYAWGRNTDGQLGIGKTQYYVESPQMVLGLEGNLMKA 714

Query: 72  VSAGRSHS 79
           ++ G +H+
Sbjct: 715 IACGENHT 722



 Score = 50.1 bits (118), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 20/104 (19%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLN 471
           AIACG  H+  +T  G +Y+ G+   G+LG G   N ++ P+ +  L+K  VE +SCG +
Sbjct: 714 AIACGENHTLFLTDTGQVYSCGSSKDGKLGLGNRTNTQLQPQLITNLSK--VEQISCGQS 771

Query: 472 HTVCIADKGK-----------------AVYAFGDGEYGKLGLGN 498
           H++ +A                      VY +G+    KLG G+
Sbjct: 772 HSMALAQDDFFKQDDDEEHARQINVKMVVYTWGNAWESKLGHGD 815



 Score = 49.3 bits (116), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG ++   + +   +Y +G  D G+LG G  +T+  K P  V  L  + ++ V+CG  
Sbjct: 2732 IACGAEYCMAIENRRKVYGWGKNDQGQLGIGAISTIVHK-PTEVQGLEGLLMKQVACGQV 2790

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLG 497
            HT+ ++++G  VY+ G    GKLGLG
Sbjct: 2791 HTLFLSEEG-CVYSCGSPTDGKLGLG 2815



 Score = 45.4 bits (106), Expect = 0.065,   Method: Composition-based stats.
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 20   ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQVSAGRSH 78
            I    +H  A+   G+++ WG   + QLG+  Q N   PQ V   L  KNI QVS G  H
Sbjct: 2390 IDCQAQHSAAIQLDGKLYTWGQGLNGQLGINAQSNMLLPQRVGGILEQKNITQVSCGVFH 2449

Query: 79   SAAWTAPPLPPHTPGHTPSSSLRLGLPQDIP 109
             A  T      +T G   +   +LGL +D+P
Sbjct: 2450 MACITNDGF-CYTWGSNTNG--QLGLDKDLP 2477



 Score = 45.4 bits (106), Expect = 0.072,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK-----VHVESVSC 468
           I CG     ++T N  +  +G+  YG +G G  ++++   +++  ++       ++ +SC
Sbjct: 264 ICCGLNFCLILTYNFQVLAWGDNSYGNIGTG-DLDYQEKPKIIQFDENKGDDSRIQFISC 322

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           G NH   ++  GK +Y +G G  G+LG  N
Sbjct: 323 GANHCAAVSLSGK-LYTWGQGIQGQLGHQN 351



 Score = 43.9 bits (102), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 35/63 (55%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S G  H + ++N G  +++GNN + QLGLG+Q     P  +  L N  I  V  G 
Sbjct: 370 VVYVSCGGAHTVCLTNEGYAYSFGNNKNGQLGLGDQEQRNVPVKIQKLQNYFIVNVVCGM 429

Query: 77  SHS 79
           +++
Sbjct: 430 NNT 432



 Score = 43.9 bits (102), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 4/101 (3%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQVSAGRSH 78
           IS G  H  AVS +G+++ WG     QLG  N +N   P  V + L  K +  VS G +H
Sbjct: 320 ISCGANHCAAVSLSGKLYTWGQGIQGQLGHQNVMNLSIPTAVKSELQEKKVVYVSCGGAH 379

Query: 79  SAAWTAPPLPPHTPGHTPSSSLRLGLPQ--DIPDHYGHLQN 117
           +   T      ++ G+  +  L LG  +  ++P     LQN
Sbjct: 380 TVCLTNEGY-AYSFGNNKNGQLGLGDQEQRNVPVKIQKLQN 419



 Score = 43.5 bits (101), Expect = 0.28,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query: 16   HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN---QINYREPQLVLALSNKNIRQV 72
            +I  +S G  H+  ++N G  + WG+N++ QLGL     QINY  P +V  L +  I QV
Sbjct: 2439 NITQVSCGVFHMACITNDGFCYTWGSNTNGQLGLDKDLPQINY--PCVVERLQSYFIIQV 2496

Query: 73   SAGRSHS 79
            + G +++
Sbjct: 2497 TCGYNNT 2503



 Score = 42.7 bits (99), Expect = 0.43,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 8    HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
             I  F    ++ I+ G    + ++ + Q+F+WG+N    LGLG+     +P LVL    K
Sbjct: 2324 QIKGFSMFSVIQIACGWSFCMILTRSHQLFSWGDNRSGNLGLGDTRYRIKPSLVLLEFGK 2383

Query: 68   --NIRQVSAGRSHSAA 81
               +R +     HSAA
Sbjct: 2384 PFQVRFIDCQAQHSAA 2399



 Score = 42.7 bits (99), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 13   KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALSNKNIRQ 71
            +N  +  I+ G E+ +A+ N  +V+ WG N   QLG+G       +P  V  L    ++Q
Sbjct: 2725 ENRRVSFIACGAEYCMAIENRRKVYGWGKNDQGQLGIGAISTIVHKPTEVQGLEGLLMKQ 2784

Query: 72   VSAGRSHS 79
            V+ G+ H+
Sbjct: 2785 VACGQVHT 2792



 Score = 40.4 bits (93), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 25  EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
           EH   ++    V+ WGN  +++LG G++ N  EP  +   SN   + +SAG  HSAA T
Sbjct: 789 EHARQINVKMVVYTWGNAWESKLGHGDRENLYEPTKI--QSNYLFKYISAGSHHSAALT 845



 Score = 38.9 bits (89), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 26/41 (63%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           IVDI +G  H +A++N G+++ WG+N   Q G  + I  +E
Sbjct: 583 IVDIELGVFHTMALTNAGEIYVWGSNQMCQHGCISNIIRQE 623



 Score = 38.5 bits (88), Expect = 7.9,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 6/70 (8%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNK----NIRQ 71
           +V I  G    L ++   QV AWG+NS   +G G+ ++Y+E P+++    NK     I+ 
Sbjct: 261 VVQICCGLNFCLILTYNFQVLAWGDNSYGNIGTGD-LDYQEKPKIIQFDENKGDDSRIQF 319

Query: 72  VSAGRSHSAA 81
           +S G +H AA
Sbjct: 320 ISCGANHCAA 329


>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
           tropicalis]
 gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
          Length = 729

 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG +H+  VT    +YTFG G +G+LGHGT      +P+ V AL K  +  V+CG NH
Sbjct: 250 VSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENH 308

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I +KG  +Y FGDG +GKLGLG
Sbjct: 309 TAIITEKG-LLYTFGDGRHGKLGLG 332



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+CG +H+ +VT NG LY FG+ ++G+LG         P  V AL    V   +CG +
Sbjct: 40  ARISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRH 99

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT+   ++GK +Y+ G    G+LGLG+T  + + Q
Sbjct: 100 HTLVYTEQGK-LYSSGGNSEGQLGLGDTAGRTSFQ 133



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           + CG  H+A++T  G LYTFG+G +G+LG G     N  VP       K  V+SV+CG  
Sbjct: 302 VTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGC 361

Query: 472 HTVCIA 477
           H +  A
Sbjct: 362 HMLVFA 367



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           QY    ++ G   SA +T +G L+ +G+   G+LG      +  P++V     +    +S
Sbjct: 141 QYKIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKGTIYCTPQKVDTGKPIAW--IS 198

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
           CG  H+  +   G+ +Y FG+ E GKLGL
Sbjct: 199 CGYYHSAFVTQDGE-LYTFGEPENGKLGL 226



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN-KVHVESVSCGLNHT 473
           ACG  H+ V T  G LY+ G    G+LG G T      + +     +  ++ +S G N +
Sbjct: 95  ACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMS 154

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +   GK ++ +GD   G+LGL    +  TPQ
Sbjct: 155 AALTVDGK-LFMWGDNSEGQLGLEKGTIYCTPQ 186



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 5/78 (6%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN---QINYREPQLVLALS 65
           + A K+  +V  + G  H L  +  G++++ G NS+ QLGLG+   + +++E     A  
Sbjct: 83  VKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTA-- 140

Query: 66  NKNIRQVSAGRSHSAAWT 83
              I+Q+SAG + SAA T
Sbjct: 141 QYKIKQLSAGSNMSAALT 158



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+    KN     IS G EH + V+  G+++ +G+N+  QLG+       +P  V A
Sbjct: 26  ENIPSKFWLKNDKPARISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKA 85

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ +   + GR H+  +T
Sbjct: 86  LKSEKVVLAACGRHHTLVYT 105



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G+    A++  G++F WG+NS+ QLGL     Y  PQ V   + K I  +S G 
Sbjct: 144 IKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKGTIYCTPQKV--DTGKPIAWISCGY 201

Query: 77  SHSA 80
            HSA
Sbjct: 202 YHSA 205


>gi|413951960|gb|AFW84609.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 552

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 1/131 (0%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C E A +T      + G ++     +  L     AIACG +HSAVVT +G L TFG 
Sbjct: 378 PVPCIESALYTKDRPSAMKGNKAAEGHVSKVLGNCVRAIACGGRHSAVVTDSGALLTFGW 437

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G T +   P  V ++  + ++ V+ GL HTVC +  G  VY+FG  ++G+LG
Sbjct: 438 GLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAGLWHTVCTSVDGD-VYSFGGNQFGQLG 496

Query: 496 LGNTGLKPTPQ 506
            G+   +  P+
Sbjct: 497 TGSDQAETLPK 507



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 3/84 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           +A G  H+   + +G +Y+FG   +G+LG G+     +P+ V A  L   +  SVSCG  
Sbjct: 468 VAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETLPKLVDATSLENKNARSVSCGAR 527

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           H+  I D+G+ V+ +G  +YG++G
Sbjct: 528 HSAIITDEGE-VFCWGWNKYGQVG 550



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   I + D++ G  H +  S  G V+++G N   QLG G+      P+LV A  L N
Sbjct: 457 VSSILGIKMQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETLPKLVDATSLEN 516

Query: 67  KNIRQVSAGRSHSA 80
           KN R VS G  HSA
Sbjct: 517 KNARSVSCGARHSA 530



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 27/40 (67%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
            + IV ++ G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 331 GVKIVAVAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRI 370



 Score = 38.9 bits (89), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 30/121 (24%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-----WKVP---------ERVVAL 458
           A+A G +H+  ++  G ++ +G G  G+LG G+ +        VP         +R  A+
Sbjct: 336 AVAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAM 395

Query: 459 --NKVH-----------VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKP 503
             NK             V +++CG  H+  + D G A+  FG G YG+ G GNT   L P
Sbjct: 396 KGNKAAEGHVSKVLGNCVRAIACGGRHSAVVTDSG-ALLTFGWGLYGQCGQGNTDDVLSP 454

Query: 504 T 504
           T
Sbjct: 455 T 455


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG  H+AVV+ +G LYTFG G++G+LGH   +N   P  V AL+ + V  ++CG +H+
Sbjct: 247 VSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHS 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V +  KG  VY +G+G++GKLG GN      PQ
Sbjct: 307 VALTVKG-LVYTWGNGDHGKLGHGNGRKVAVPQ 338



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG  H+A VT NG LYT+G G YG+LGHG       P+RV AL    V  ++CG  HT
Sbjct: 90  VTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVEALVGATVAQIACGSRHT 149

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
             +   G A+Y +GD E G  G G T
Sbjct: 150 AIVTASG-ALYTWGDKENGVAGHGET 174



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           IACG  H+ V+T++G ++T+G GD GRLGHG    WK VP    +L    V  V+CG  H
Sbjct: 38  IACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDN-GWKYVPRMTQSLAGQIVLQVTCGSYH 96

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           T  +   G  +Y +G G YGKLG G+     TP+
Sbjct: 97  TAAVTGNGD-LYTWGGGMYGKLGHGDEAGHATPK 129



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           ACGF H+A+VT  G L+T+G G +GRLGH +  N   P  V  +       VSCG  HT 
Sbjct: 197 ACGF-HTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTA 255

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +++ G+ +Y FG GE+G+LG  +   K TP
Sbjct: 256 VVSEDGR-LYTFGGGEHGQLGHNDRVNKMTP 285



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 56/86 (65%), Gaps = 4/86 (4%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVS-CG 469
           A IACG +H+A+VT++G LYT+G+ + G  GHG T   + +P  + ++    V  +S CG
Sbjct: 140 AQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACG 199

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLG 495
             HT  + D G+ ++ +G+G++G+LG
Sbjct: 200 F-HTAIVTDAGE-LFTWGEGKFGRLG 223



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           ++T+G G+ G+LG G T +   P  V AL  V V+ ++CG  HTV +   G+ V+ +G G
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGE-VFTWGRG 60

Query: 490 EYGKLGLGNTGLKPTPQ 506
           + G+LG G+ G K  P+
Sbjct: 61  DDGRLGHGDNGWKYVPR 77



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 43/77 (55%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           ++ A + + +  I+ G+ H + ++  G+VF WG   D +LG G+      P++  +L+ +
Sbjct: 26  YVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQ 85

Query: 68  NIRQVSAGRSHSAAWTA 84
            + QV+ G  H+AA T 
Sbjct: 86  IVLQVTCGSYHTAAVTG 102



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 402 TFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           TF   L   + + I CG+ HS  +T  G +YT+GNGD+G+LGHG      VP+ V
Sbjct: 286 TFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAV 340



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 37/69 (53%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           ++ ++ G+ H  AV+  G ++ WG     +LG G++  +  P+ V AL    + Q++ G 
Sbjct: 87  VLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVEALVGATVAQIACGS 146

Query: 77  SHSAAWTAP 85
            H+A  TA 
Sbjct: 147 RHTAIVTAS 155



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 34/68 (50%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           +S G  H   VS  G+++ +G     QLG  +++N   P  V AL    + Q++ G SHS
Sbjct: 247 VSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHS 306

Query: 80  AAWTAPPL 87
            A T   L
Sbjct: 307 VALTVKGL 314



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 25/44 (56%)

Query: 36 VFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
          VF WG   D QLGLG+  +  EP  V AL    ++Q++ G  H+
Sbjct: 2  VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHT 45



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 35/74 (47%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + +     +  IS    H   V++ G++F WG     +LG  ++ N   P +V  +  
Sbjct: 182 RLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVG 241

Query: 67  KNIRQVSAGRSHSA 80
           K  RQVS G  H+A
Sbjct: 242 KKPRQVSCGGFHTA 255



 Score = 38.5 bits (88), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALS 65
           + + A     +  I+ G+ H   V+ +G ++ WG+  +   G G    ++  P+L+ +++
Sbjct: 129 KRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMA 188

Query: 66  NKNIRQVSAGRSHSA 80
            K + Q+SA   H+A
Sbjct: 189 AKRVAQISACGFHTA 203


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 4/118 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL---YTFGNGDY 438
           G ++ G++    T  +SVP    +        ++C + H+ +   +G L   YTFG  DY
Sbjct: 484 GYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDY 543

Query: 439 GRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
           G+LGH  +++ K+P+ V AL+   + SV+CG  HT+ +   GKA +AFG  +YG+LG+
Sbjct: 544 GQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKA-FAFGKNDYGQLGI 600



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLN 471
           ++ACG  H+ VVT +G  + FG  DYG+LG  T  N   P +V   L +     + CG  
Sbjct: 570 SVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYY 629

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           HT+ +   G  ++AFG  +YG+LGLG +    T
Sbjct: 630 HTIALC-SGAHLFAFGRNDYGQLGLGRSNASST 661



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 13/104 (12%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-----TTMNWKVPER-------VVALNKV 461
           I CG+ H+  + S  +L+ FG  DYG+LG G     +T N ++ ++       +  L   
Sbjct: 624 IRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGK 683

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +  ++CG  HT+ ++D G  +Y FG   +G+LG G+T  +  P
Sbjct: 684 DIVRIACGCYHTIAVSDNG-VMYVFGRNNHGQLGTGDTTERVYP 726



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)

Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
           G +H+ +V+++G + T G    G+LGHG T +  VP+ + +L    V  VSC   HTV  
Sbjct: 467 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 526

Query: 477 ADKG--KAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + G  + +Y FG  +YG+LG  ++  +  PQ
Sbjct: 527 CEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQ 558



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           +++ G   YG LGHG T + K  ER+ AL +  +  +  G  HTV +   GK V+  G  
Sbjct: 375 VWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGK-VFTCGYN 433

Query: 490 EYGKLGLGNTG 500
           + G+ G G T 
Sbjct: 434 DNGQCGQGGTA 444



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 32/63 (50%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H+  V+ NG +Y FG  ++G+LG G T     P  +       +  V+ G  HT
Sbjct: 688 IACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYHT 747

Query: 474 VCI 476
           V +
Sbjct: 748 VVL 750



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query: 23  GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           G EH + VS  G+V   G N   QLG GN  +   P+++ +L NK +R VS    H+
Sbjct: 467 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHT 523



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 39/80 (48%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           ++ R I   +   IV I+ G  H +AVS+ G ++ +G N+  QLG G+      P  +  
Sbjct: 672 SNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDD 731

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
              K I  V+AG  H+   T
Sbjct: 732 FVGKRIALVAAGFYHTVVLT 751


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 54/84 (64%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A +T +G L+TFG+G  G+LGHG++ N  +P RV+ L    V  ++CG +HT
Sbjct: 246 ISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHT 305

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           +        VYAFG   +G+LG G
Sbjct: 306 LAFVPSSGTVYAFGCNSHGQLGTG 329



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG +H+  +  +G +YT G+   G+LGH    N   PE V AL+   +  VSCG  H+
Sbjct: 38  VACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGN--SPELVGALDTQKITMVSCGRAHS 95

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           V + ++G+ V+ +G G+ G+LGL
Sbjct: 96  VAVNEQGQ-VFVWGAGDGGQLGL 117



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           HI   ++  +V IS G EH  A++ +G +F +G+ S  QLG G+  N   P+ V+ L   
Sbjct: 234 HIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGT 293

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI 108
            + Q++ GR H+ A+       +  G      L  G+  D+
Sbjct: 294 EVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTGILADL 334



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + +   I +  I+ G +H  A+S +G VF WG N   QLGL ++ +   P  +  L ++ 
Sbjct: 183 VKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQR 242

Query: 69  IRQVSAGRSHSAAWT 83
           +  +S G  H+AA T
Sbjct: 243 VVYISCGDEHTAALT 257



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQL 60
           +G S   + A     I  +S G  H +AV+  GQVF WG     QLGL   +   R P+L
Sbjct: 70  AGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRL 129

Query: 61  VLALSNKNIRQVSAGRSHSAA 81
           +  L + +I QV  G  H  A
Sbjct: 130 LKKLCDHSISQVVCGNQHCIA 150



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I  G  H   ++ +G ++ +G    G+LG     +  VP  +  L    V  +SCG  
Sbjct: 192 AQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDE 251

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +   G  ++ FGDG  G+LG G++  +  P+
Sbjct: 252 HTAALTKSG-GLFTFGDGSRGQLGHGSSNNELLPR 285



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALSNKNIRQVSAG 75
           I  +  G +H +A+S  GQ+F WG NS  QLGLG  + +   P  V +L+   + Q++AG
Sbjct: 138 ISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAG 197

Query: 76  RSHSAA 81
             H  A
Sbjct: 198 GDHCFA 203



 Score = 45.1 bits (105), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGL 470
           + + CG +H   ++ +G L+T+G    G+LG G     K+ P  V +L  + +  ++ G 
Sbjct: 139 SQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGG 198

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +H   ++  G AV+ +G  + G+LGL +   +  P
Sbjct: 199 DHCFALSLSG-AVFGWGKNKAGQLGLNDKQDRAVP 232



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 19 DISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSH 78
          +++ G +H L +   G V+  G+NS  QLG     N   P+LV AL  + I  VS GR+H
Sbjct: 37 EVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGN--SPELVGALDTQKITMVSCGRAH 94

Query: 79 SAA 81
          S A
Sbjct: 95 SVA 97


>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 1598

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 10/96 (10%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP------ERVVALNKVH---VE 464
            IACG++H+A++T + +LYTFG+G+ GRLGHGT  +   P        ++A   V    V 
Sbjct: 1249 IACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFGGVV 1308

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
             VSCG  HT+ +   G  +Y FG GE G+LG G TG
Sbjct: 1309 DVSCGREHTMVVTGNGD-LYGFGWGEAGRLGTGETG 1343



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 4/92 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++CG +H+ VVT NG LY FG G+ GRLG G T +   P RV   N   + +V+CG  HT
Sbjct: 1310 VSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVDLRN---IAAVACGREHT 1366

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + +  KG+ V+AFG G  G+LG G+   +  P
Sbjct: 1367 LALTSKGR-VFAFGAGFGGRLGNGSETDEELP 1397



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            AA+ACG +H+  +TS G ++ FG G  GRLG+G+  + ++P  V  L +  + +++ G  
Sbjct: 1357 AAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGEC 1416

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLG--NTGLKPT 504
            H+  ++  G+ V  +G G  G LG G  +  L PT
Sbjct: 1417 HSCALSRDGE-VLTWGFGSSGALGHGTRDNCLIPT 1450



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 12/125 (9%)

Query: 382  GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
            GA + GR+       + +P       +Y   AIA G  HS  ++ +G + T+G G  G L
Sbjct: 1379 GAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALSRDGEVLTWGFGSSGAL 1438

Query: 442  GHGTTMN----------WKVPERVVALNKVH-VESVSCGLNHTVCIADKGKAVYAFGDGE 490
            GHGT  N          W  P     ++ +  V SV+CG  HT+   + G  +Y +GD  
Sbjct: 1439 GHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSYHTLAATNDG-VLYGWGDAA 1497

Query: 491  YGKLG 495
             G+LG
Sbjct: 1498 AGQLG 1502



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 39/66 (59%)

Query: 16   HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
            +I  ++ G EH LA+++ G+VFA+G     +LG G++ +   P LV  L   +I  ++AG
Sbjct: 1355 NIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAG 1414

Query: 76   RSHSAA 81
              HS A
Sbjct: 1415 ECHSCA 1420



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            +VD+S G EH + V+  G ++ +G     +LG G   +   P  V     +NI  V+ GR
Sbjct: 1307 VVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRV---DLRNIAAVACGR 1363

Query: 77   SHSAAWTA 84
             H+ A T+
Sbjct: 1364 EHTLALTS 1371


>gi|110740523|dbj|BAE98367.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 488

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 3/131 (2%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C E +S+ G+ T       SV +     L  Y   IACG +HSAV+T  G L TFG 
Sbjct: 280 PIPCIEPSSY-GKATSSGVNMSSV-VQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGW 337

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G+T +   P  V +L  + +E V+ GL HT C +  G  VYAFG  ++G+LG
Sbjct: 338 GLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGD-VYAFGGNQFGQLG 396

Query: 496 LGNTGLKPTPQ 506
            G    +  P+
Sbjct: 397 TGCDQAETLPK 407



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 3/101 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-- 457
           P   ++ L      +A G  H+   +S+G +Y FG   +G+LG G      +P+ + A  
Sbjct: 354 PTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPN 413

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           L  V+V+++SCG  HT  I D+G+ V+ +G  +YG+LG+G+
Sbjct: 414 LENVNVKTISCGARHTAVITDEGR-VFCWGWNKYGQLGIGD 453



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 30/52 (57%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           P  +N+++  IS G  H   +++ G+VF WG N   QLG+G+ I+   P  V
Sbjct: 412 PNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEV 463



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   I I +++ G  H    S+ G V+A+G N   QLG G       P+L+ A  L N
Sbjct: 357 VSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLEN 416

Query: 67  KNIRQVSAGRSHSA 80
            N++ +S G  H+A
Sbjct: 417 VNVKTISCGARHTA 430



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T  G ++ +G   YG+LG G  ++   P   V +     ++++CG  HT
Sbjct: 422 ISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAE-VRIKDCFPKNIACGWWHT 480

Query: 474 V 474
           +
Sbjct: 481 L 481



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
            + IV ++ G  H LA+S+ GQV+ WG   + QLGLG+++
Sbjct: 233 GVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRV 272


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 52/84 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG  H+A +T++G ++TFG G YG+LGHG  +N  VP RVV L    +  +SCG  HT
Sbjct: 305 VCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHT 364

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           V  A +   +Y FG G  G+LG G
Sbjct: 365 VAYAPQSGRLYIFGLGMSGQLGNG 388



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 3/84 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG KH+ V+ +NG +Y+ G  D+G+LG   +M  +  E+V AL+   + +V+CG  H+
Sbjct: 96  VACGHKHTLVLLANGSVYSCGANDFGQLGQDRSM--RKLEQVAALSAHEIRAVACGEAHS 153

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           + ++D G+ V+++G    G+LG G
Sbjct: 154 LALSDAGQ-VFSWGCNRNGQLGCG 176



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           TG + +P   ++ +    A +ACG  HS  +T +G ++ +G    G+LG     +   P 
Sbjct: 233 TGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPT 292

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +  L    ++ V CG NHT  +   G  V+ FG G YG+LG G
Sbjct: 293 VLKPLRSQRIKHVCCGENHTAALTADG-GVFTFGAGTYGQLGHG 335



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSN 66
           I     +HIV I+ G  H LA++N G++F+WG N+  QLGLG     N R P+ V  L  
Sbjct: 188 IKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVG 247

Query: 67  KNIRQVSAGRSHSAAWT 83
             +  V+ G  HS   T
Sbjct: 248 VPLALVACGAMHSVGLT 264



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 4/97 (4%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLN 471
           A+ACG  HS  ++  G ++++G    G+LG GT    ++ P+ +  L  +H+  ++CG  
Sbjct: 145 AVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAV 204

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG--NTGLKPTPQ 506
           H + +A+ G+ ++++G    G+LGLG  +TG +  P+
Sbjct: 205 HCLALANNGE-LFSWGGNASGQLGLGRDSTGNERLPR 240



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
             + A     I  ++ G  H LA+S+ GQVF+WG N + QLG G +   R  P+++  L+
Sbjct: 133 EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLA 192

Query: 66  NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLP----QDIPDHYGHLQNKPLP 121
             +I Q++ G  H  A  A      + G   S  L LG      + +P    HL   PL 
Sbjct: 193 TLHIVQIACGAVHCLA-LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLA 251

Query: 122 LI 123
           L+
Sbjct: 252 LV 253



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +     + +  ++ G  H + ++ +G VF WG NS  QLGL +Q +   P ++  L +
Sbjct: 240 RRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS 299

Query: 67  KNIRQVSAGRSHSAAWTA 84
           + I+ V  G +H+AA TA
Sbjct: 300 QRIKHVCCGENHTAALTA 317



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
           IACG  H   + +NG L+++G    G+LG G  +T N ++P RV  L  V +  V+CG  
Sbjct: 199 IACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAM 258

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           H+V +   G  V+ +G    G+LGL +
Sbjct: 259 HSVGLTPSG-TVFVWGRNSCGQLGLSD 284



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 37/72 (51%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            ++  I  +  G  H  A++  G VF +G  +  QLG G ++N   P+ V+ L    I Q
Sbjct: 297 LRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQ 356

Query: 72  VSAGRSHSAAWT 83
           +S GR H+ A+ 
Sbjct: 357 LSCGRCHTVAYA 368



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 25/215 (11%)

Query: 221  QVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVA 280
            Q+     +DL+ P    KV+  GE A DAGGV  +    +  E+L          P    
Sbjct: 849  QLADQSAADLKKP---LKVQFHGEDAVDAGGVKKEFFLLLLKEILD---------PKYGM 896

Query: 281  DTGYNRDRYI-LNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             T Y   R I  N   ++S +  + +  +GI+ G+AI     + LP   +++K ++++  
Sbjct: 897  FTEYPESRCIWFN---TQSFEEDVMYYLIGIVCGLAIYNFTIIALPFPLVLYKKLLKQKP 953

Query: 340  TFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI-IPLECFEGASWTGRITPIVTGGQS 398
            T  DL D     A+ L+ + D     +    F    + +E + G + +  +     GG  
Sbjct: 954  TLKDLHDLSPTLAKGLQNLLDYDGDDLENTFFLTFEVSVEHY-GHTLSHELK---KGGSH 1009

Query: 399  VPLTFANRLQYYEA----AIACGFKHSAVVTSNGY 429
            + +T  NR +Y +      +    KH     S G+
Sbjct: 1010 IKVTKENRQEYVDLYVDFVLNTSVKHCFEAFSQGF 1044



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +++ G +H L +   G V++ G N   QLG    +  R+ + V ALS   IR V+ G 
Sbjct: 93  VREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSM--RKLEQVAALSAHEIRAVACGE 150

Query: 77  SHSAAWT 83
           +HS A +
Sbjct: 151 AHSLALS 157


>gi|15233306|ref|NP_191117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7076801|emb|CAB75916.1| Regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|332645883|gb|AEE79404.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 3/131 (2%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C E +S+ G+ T       SV +     L  Y   IACG +HSAV+T  G L TFG 
Sbjct: 280 PIPCIEPSSY-GKATSSGVNMSSV-VQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGW 337

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G+T +   P  V +L  + +E V+ GL HT C +  G  VYAFG  ++G+LG
Sbjct: 338 GLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGD-VYAFGGNQFGQLG 396

Query: 496 LGNTGLKPTPQ 506
            G    +  P+
Sbjct: 397 TGCDQAETLPK 407



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 3/101 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-- 457
           P   ++ L      +A G  H+   +S+G +Y FG   +G+LG G      +P+ + A  
Sbjct: 354 PTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPN 413

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           L  V+V+++SCG  HT  I D+G+ V+ +G  +YG+LG+G+
Sbjct: 414 LENVNVKTISCGARHTAVITDEGR-VFCWGWNKYGQLGIGD 453



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 30/52 (57%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           P  +N+++  IS G  H   +++ G+VF WG N   QLG+G+ I+   P  V
Sbjct: 412 PNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEV 463



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   I I +++ G  H    S+ G V+A+G N   QLG G       P+L+ A  L N
Sbjct: 357 VSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLEN 416

Query: 67  KNIRQVSAGRSHSA 80
            N++ +S G  H+A
Sbjct: 417 VNVKTISCGARHTA 430



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T  G ++ +G   YG+LG G  ++   P   V +     ++++CG  HT
Sbjct: 422 ISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAE-VRIKDCFPKNIACGWWHT 480

Query: 474 V 474
           +
Sbjct: 481 L 481



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
            + IV ++ G  H LA+S+ GQV+ WG   + QLGLG+++
Sbjct: 233 GVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRV 272


>gi|356551654|ref|XP_003544189.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 477

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           Y   IACG +HSAV+T  G L TFG G YG+ G G T +   P  V ++  +H+E V+ G
Sbjct: 301 YIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGITDDELSPTCVSSILGIHIERVAAG 360

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           L HTVC +  G  VYAFG+ ++G+LG G    +  P+
Sbjct: 361 LWHTVCTSADGD-VYAFGENQFGQLGTGADQAETLPR 396



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
           G+    +T  +  P   ++ L  +   +A G  H+   +++G +Y FG   +G+LG G  
Sbjct: 330 GQCGQGITDDELSPTCVSSILGIHIERVAAGLWHTVCTSADGDVYAFGENQFGQLGTGAD 389

Query: 447 MNWKVPERVV--ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
               +P  +   +L+ +  +++SCG  HT  + + GK V+ +G  +YG+LGLG+
Sbjct: 390 QAETLPRLLDSPSLDNLRAKNISCGARHTALVTEGGK-VFCWGWNKYGQLGLGD 442



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A+VT  G ++ +G   YG+LG G  ++  +P  V+ +     ++V+CG  HT
Sbjct: 411 ISCGARHTALVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEVI-IEGCVPKNVACGWWHT 469

Query: 474 VCIADK 479
           + +A+ 
Sbjct: 470 LLLAES 475



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 29/53 (54%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           P+  N+   +IS G  H   V+  G+VF WG N   QLGLG+ I+   P  V+
Sbjct: 401 PSLDNLRAKNISCGARHTALVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEVI 453



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLV 61
            I I  ++ G  H LA+S+TG V+AWG   + QLGLG++I     P LV
Sbjct: 219 GIRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRMVSTPHLV 267



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + +   IHI  ++ G  H +  S  G V+A+G N   QLG G       P+L+ + S  N
Sbjct: 346 VSSILGIHIERVAAGLWHTVCTSADGDVYAFGENQFGQLGTGADQAETLPRLLDSPSLDN 405

Query: 69  IR--QVSAGRSHSA 80
           +R   +S G  H+A
Sbjct: 406 LRAKNISCGARHTA 419



 Score = 38.5 bits (88), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 29/122 (23%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--------------NWKVPERVVA 457
           A++A G +H+  ++  G ++ +G G  G+LG G+ +              ++   +R   
Sbjct: 223 ASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYSKDRSAT 282

Query: 458 LNKVHVES--------------VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
           L + +++S              ++CG  H+  I D G A+  FG G YG+ G G T  + 
Sbjct: 283 LARGNMDSEGQTFRVPGSYIKRIACGGRHSAVITDAG-ALLTFGWGLYGQCGQGITDDEL 341

Query: 504 TP 505
           +P
Sbjct: 342 SP 343


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 52/84 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG  H+A +T++G ++TFG G YG+LGHG  +N  VP RVV L    +  +SCG  HT
Sbjct: 299 VCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHT 358

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           V  A +   +Y FG G  G+LG G
Sbjct: 359 VAYAPQSGRLYIFGLGMSGQLGNG 382



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 3/84 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG KH+ V+ +NG +Y+ G  D+G+LG   +M  +  E+V AL+   + +V+CG  H+
Sbjct: 90  VACGHKHTLVLLANGSVYSCGANDFGQLGQDRSM--RKLEQVAALSAHEIRAVACGEAHS 147

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           + ++D G+ V+++G    G+LG G
Sbjct: 148 LALSDAGQ-VFSWGCNRNGQLGCG 170



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           TG + +P   ++ +    A +ACG  HS  +T +G ++ +G    G+LG     +   P 
Sbjct: 227 TGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPT 286

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            +  L    ++ V CG NHT  +   G  V+ FG G YG+LG G
Sbjct: 287 VLKPLRSQRIKHVCCGENHTAALTADG-GVFTFGAGTYGQLGHG 329



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSN 66
           I     +HIV I+ G  H LA++N G++F+WG N+  QLGLG     N R P+ V  L  
Sbjct: 182 IKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVG 241

Query: 67  KNIRQVSAGRSHSAAWT 83
             +  V+ G  HS   T
Sbjct: 242 VPLALVACGAMHSVGLT 258



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 4/97 (4%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLN 471
           A+ACG  HS  ++  G ++++G    G+LG GT    ++ P+ +  L  +H+  ++CG  
Sbjct: 139 AVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAV 198

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG--NTGLKPTPQ 506
           H + +A+ G+ ++++G    G+LGLG  +TG +  P+
Sbjct: 199 HCLALANNGE-LFSWGGNASGQLGLGRDSTGNERLPR 234



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
             + A     I  ++ G  H LA+S+ GQVF+WG N + QLG G +   R  P+++  L+
Sbjct: 127 EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLA 186

Query: 66  NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLP----QDIPDHYGHLQNKPLP 121
             +I Q++ G  H  A  A      + G   S  L LG      + +P    HL   PL 
Sbjct: 187 TLHIVQIACGAVHCLA-LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLA 245

Query: 122 LI 123
           L+
Sbjct: 246 LV 247



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +     + +  ++ G  H + ++ +G VF WG NS  QLGL +Q +   P ++  L +
Sbjct: 234 RRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS 293

Query: 67  KNIRQVSAGRSHSAAWTA 84
           + I+ V  G +H+AA TA
Sbjct: 294 QRIKHVCCGENHTAALTA 311



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
           IACG  H   + +NG L+++G    G+LG G  +T N ++P RV  L  V +  V+CG  
Sbjct: 193 IACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAM 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           H+V +   G  V+ +G    G+LGL +
Sbjct: 253 HSVGLTPSG-TVFVWGRNSCGQLGLSD 278



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 37/72 (51%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            ++  I  +  G  H  A++  G VF +G  +  QLG G ++N   P+ V+ L    I Q
Sbjct: 291 LRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQ 350

Query: 72  VSAGRSHSAAWT 83
           +S GR H+ A+ 
Sbjct: 351 LSCGRCHTVAYA 362



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 25/215 (11%)

Query: 221  QVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVA 280
            Q+     +DL+ P    KV+  GE A DAGGV  +    +  E+L          P    
Sbjct: 843  QLADQSAADLKKP---LKVQFHGEDAVDAGGVKKEFFLLLLKEILD---------PKYGM 890

Query: 281  DTGYNRDRYI-LNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             T Y   R I  N   ++S +  + +  +GI+ G+AI     + LP   +++K ++++  
Sbjct: 891  FTEYPESRCIWFN---TQSFEEDVMYYLIGIVCGLAIYNFTIIALPFPLVLYKKLLKQKP 947

Query: 340  TFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI-IPLECFEGASWTGRITPIVTGGQS 398
            T  DL D     A+ L+ + D     +    F    + +E + G + +  +     GG  
Sbjct: 948  TLKDLHDLSPTLAKGLQNLLDYDGDDLENTFFLTFEVSVEHY-GHTLSHELK---KGGSH 1003

Query: 399  VPLTFANRLQYYEA----AIACGFKHSAVVTSNGY 429
            + +T  NR +Y +      +    KH     S G+
Sbjct: 1004 IKVTKENRQEYVDLYVDFVLNTSVKHCFEAFSQGF 1038



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +++ G +H L +   G V++ G N   QLG    +  R+ + V ALS   IR V+ G 
Sbjct: 87  VREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSM--RKLEQVAALSAHEIRAVACGE 144

Query: 77  SHSAAWT 83
           +HS A +
Sbjct: 145 AHSLALS 151


>gi|168046566|ref|XP_001775744.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672896|gb|EDQ59427.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 441

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)

Query: 370 NFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGY 429
           +FP+ IP  CF        +T        VP+  +     Y  AIACG +HSAV+T  G 
Sbjct: 239 SFPQHIP--CF-------NMTDTGNARSGVPIPGS-----YIKAIACGGRHSAVITDTGA 284

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           + TFG G YG++G G+T +   P  V  L  + +  ++ GL HT+CI + G  VY+FG  
Sbjct: 285 VLTFGWGLYGQIGQGSTEDELSPSHVSTLQGLSIVGIAAGLWHTLCITNTGD-VYSFGGN 343

Query: 490 EYGKLGLGNTGLKPTPQ 506
           ++G+LG+G    + +P+
Sbjct: 344 QFGQLGVGGNNAELSPR 360



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A+ACG +HS V+T +G ++ +G   YG+LG G   N  +P +V   +     S++CG  H
Sbjct: 374 AVACGARHSVVLTGSGKIFAWGWNKYGQLGLGDCNNRDLPMQVTMNDGGRAASIACGWWH 433

Query: 473 TV 474
           T+
Sbjct: 434 TL 435



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LS 65
           H+   + + IV I+ G  H L ++NTG V+++G N   QLG+G       P+L+ A  L 
Sbjct: 309 HVSTLQGLSIVGIAAGLWHTLCITNTGDVYSFGGNQFGQLGVGGNNAELSPRLIDAPLLG 368

Query: 66  NKNIRQVSAGRSHS 79
           ++    V+ G  HS
Sbjct: 369 DELSVAVACGARHS 382



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 32/64 (50%)

Query: 18  VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
           V ++ G  H + ++ +G++FAWG N   QLGLG+  N   P  V          ++ G  
Sbjct: 373 VAVACGARHSVVLTGSGKIFAWGWNKYGQLGLGDCNNRDLPMQVTMNDGGRAASIACGWW 432

Query: 78  HSAA 81
           H+ A
Sbjct: 433 HTLA 436


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T  G +YTFG G YG+LGHGT +    VP+ V  L    + +V+CG +H
Sbjct: 252 VACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESH 310

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  IA+ G  ++ FGDG +GKLGLG
Sbjct: 311 TAVIAENG-LMFTFGDGRHGKLGLG 334



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AVVT NG LY FG+ D+G+LG G+    + P  V AL     +   CG NHT
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT 103

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           +   +KG  VYA G    G+LGLG+T  + T
Sbjct: 104 LVYTEKGN-VYAAGGNSEGQLGLGDTEERTT 133



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 5/88 (5%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH--GTTMNWKVPERVVALNKVHVESVSCG 469
           ++I+CG+ HSA +T +G LYTFG  + G+LG       N +VP+ V+ + +  V  V+CG
Sbjct: 197 SSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACG 255

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
             HTV + + G  VY FG G+YG+LG G
Sbjct: 256 GEHTVVLTETG--VYTFGLGQYGQLGHG 281



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+   FKN   V IS G EH   V+  G+++ +G+N   QLGLG++   R+P  V A
Sbjct: 28  ENIPSKFWFKNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKA 87

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L  +  +    GR+H+  +T
Sbjct: 88  LKPEKTKLAVCGRNHTLVYT 107



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 403 FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           F N  Q+    +A G   SA VT +G L+ +G+   G++G        VP +V     V 
Sbjct: 140 FTN--QHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVS 197

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
             S+SCG  H+  I   G+ +Y FG+ E GKLGL
Sbjct: 198 --SISCGYYHSAFITGDGE-LYTFGEPENGKLGL 228



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 29/47 (61%)

Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           SVP +  +   +    + CG  H+AV+  NG ++TFG+G +G+LG G
Sbjct: 288 SVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGKLGLG 334



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F N H I  ++ G+    AV+  GQ+F WG+NS+ Q+GL ++     P  V     K
Sbjct: 137 ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV--GK 194

Query: 68  NIRQVSAGRSHSAAWTA 84
            +  +S G  HSA  T 
Sbjct: 195 PVSSISCGYYHSAFITG 211



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 22  VGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN-IRQVSAGRSHSA 80
            G  H L  +  G V+A G NS+ QLGLG+        L+   +N++ I+Q++AG   SA
Sbjct: 98  CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSA 157

Query: 81  AWT 83
           A T
Sbjct: 158 AVT 160


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 59/112 (52%), Gaps = 5/112 (4%)

Query: 396 GQSVPLTFANRLQYYE----AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV 451
           G + P T  +RL+  E    A IACG  HS V+T  G +Y+FG G  G+LGHGT  N   
Sbjct: 346 GDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEIN 405

Query: 452 PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
           P  +  L       V CG  HT+    K   +YAFG G  G+LG G  G++P
Sbjct: 406 PRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTG-VGVEP 456



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G +H+  +T NG +Y++GN  +G+LG G T    +P R+  L       ++CG +H+
Sbjct: 316 LAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHS 375

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           V + + G  VY+FG G  G+LG G
Sbjct: 376 VVLTETG-GVYSFGAGGQGQLGHG 398



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 4/85 (4%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +AIACG  H+  +  +G +Y+ G+ D G+LGH    +   PERV AL    +  ++CG  
Sbjct: 127 SAIACGRAHTLFLV-DGQVYSCGSNDQGQLGH--KKHRSKPERVDALEPYTITQIACGET 183

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGL 496
           H++ +   G+ V+A+GD +  +LGL
Sbjct: 184 HSLALTSNGQ-VFAWGDNKASQLGL 207



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I I  ++ G  H LA++  GQV++WGNN   QLG+G+   +  P  +  L ++    ++ 
Sbjct: 311 IPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIAC 370

Query: 75  GRSHSAAWT 83
           G  HS   T
Sbjct: 371 GEDHSVVLT 379



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 38/80 (47%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           T  R + A     IV I  G    L +S  G VFAWG+N+  QL L        P LV  
Sbjct: 248 TRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKE 307

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L    IRQ++AG  H+ A T
Sbjct: 308 LYGIPIRQLAAGGRHTLALT 327



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG   S V++  G ++ +G+   G+L         VP  V  L  + +  ++ G  HT
Sbjct: 264 IVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQLAAGGRHT 323

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +   G+ VY++G+ ++G+LG+G+T     P
Sbjct: 324 LALTFNGQ-VYSWGNNQFGQLGVGDTAPHTIP 354



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 36/198 (18%)

Query: 221  QVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVA 280
            Q++ ++ S+L+ P    KV+ +GE   DAGGV  + +  +  E+L     + V  P    
Sbjct: 1008 QIMSIQPSELKKP---LKVQFVGEDGVDAGGVRKEFLQLLLREILDPKYGMFVSNP---- 1060

Query: 281  DTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVT 340
                 R R +       S ++   F+ +G+LF +AI     +  P   +++K ++     
Sbjct: 1061 -----RTRLLWFS--GHSFEAEHMFRLIGMLFSLAIYNSIIIDAPFPSVLYKKLLNRIPV 1113

Query: 341  FTDLEDNDTLYAQSLR--------AIRDIHLS-GVTEANFPEIIPLECFEGASWTGRITP 391
              DLE  D    ++L+         + D+ L+  V+  NF E++  E             
Sbjct: 1114 LEDLEQVDPDVYRNLKYLLSCPADEVTDLALTFAVSTDNFGEVVTYE------------- 1160

Query: 392  IVTGGQSVPLTFANRLQY 409
            +V  G  + +T  NR  Y
Sbjct: 1161 LVPNGGEISVTADNRRDY 1178



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 31/50 (62%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
           + A +   I  I+ G  H LA+++ GQVFAWG+N  +QLGL    + R+P
Sbjct: 167 VDALEPYTITQIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQP 216



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 33/60 (55%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I+ G +H + ++ TG V+++G     QLG G   N   P+++  L  K+  QV  GR H+
Sbjct: 368 IACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLCGRRHT 427


>gi|123484157|ref|XP_001324201.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121907080|gb|EAY11978.1| hypothetical protein TVAG_271610 [Trichomonas vaginalis G3]
          Length = 966

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 5/197 (2%)

Query: 214 IFAQISRQVVKMKGSDLRLPS-RAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
           I +QI +Q+   K S+L+  S + WKVK  GE   D GG+  + ++E+  +L +     +
Sbjct: 616 IISQIRKQI---KISNLKNESDQPWKVKFAGENGLDMGGLARELVSEVSLDLRNPNCGFV 672

Query: 273 VRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWK 332
             TPN ++  GY RD++I  P  +E   +   +K +G L  + IRT        +P+VW+
Sbjct: 673 CPTPNSISQVGYYRDKFIFVPTNNELRSNKKLYKSIGGLLLLIIRTGLVQEFDFAPVVWR 732

Query: 333 LIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPI 392
            +V   V+  D+ + D  Y  ++ +++D   S ++E  F +   L  F      G+   +
Sbjct: 733 FLVSNKVSIEDIYEIDVNYKNTIESLKDAINSRISEDEFNKQFNL-YFVVKDSLGQDHSL 791

Query: 393 VTGGQSVPLTFANRLQY 409
              G S  ++ +N  +Y
Sbjct: 792 NQNGTSCKVSISNANEY 808


>gi|357125846|ref|XP_003564600.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
           1 [Brachypodium distachyon]
          Length = 499

 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 1/131 (0%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C E A +       + G ++     +  +     AIACG +HS VVT +G L TFG 
Sbjct: 289 PIPCIESALYGKDRPAAMKGNKNAETQISKVMGNCVKAIACGGRHSVVVTDSGTLLTFGW 348

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G T +   P  V ++  V +E  + GL HTVCI+  G  VY+FG  ++G+LG
Sbjct: 349 GLYGQCGQGNTDDVLSPTCVSSILGVKMEGAAAGLWHTVCISVDGD-VYSFGGNQFGQLG 407

Query: 496 LGNTGLKPTPQ 506
            G+   +  P+
Sbjct: 408 TGSDEAETVPK 418



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-- 457
           P   ++ L       A G  H+  ++ +G +Y+FG   +G+LG G+     VP+ V A  
Sbjct: 365 PTCVSSILGVKMEGAAAGLWHTVCISVDGDVYSFGGNQFGQLGTGSDEAETVPKLVDASC 424

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           L   +  +VSCG  H+  I D+ + V+ +G  +YG+LGLG++
Sbjct: 425 LENKNARTVSCGARHSAIITDESE-VFCWGWNKYGQLGLGDS 465



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 3/85 (3%)

Query: 397 QSVP-LTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           ++VP L  A+ L+   A  ++CG +HSA++T    ++ +G   YG+LG G +M+  VP  
Sbjct: 414 ETVPKLVDASCLENKNARTVSCGARHSAIITDESEVFCWGWNKYGQLGLGDSMDRNVP-C 472

Query: 455 VVALNKVHVESVSCGLNHTVCIADK 479
           +V ++     +VSCG  HT+ +A+ 
Sbjct: 473 IVPMDAYRALNVSCGWWHTLVLAES 497



 Score = 45.1 bits (105), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   + +   + G  H + +S  G V+++G N   QLG G+      P+LV A  L N
Sbjct: 368 VSSILGVKMEGAAAGLWHTVCISVDGDVYSFGGNQFGQLGTGSDEAETVPKLVDASCLEN 427

Query: 67  KNIRQVSAGRSHSA 80
           KN R VS G  HSA
Sbjct: 428 KNARTVSCGARHSA 441



 Score = 41.6 bits (96), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
           + I  ++ G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 243 VKITAVAAGGRHTLALSDFGQVWGWGYGGEGQLGLGSRI 281


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  HSAVVT++G +YTFG G++G+LGHG  +N   P  V  L+ V +  ++CG +H+
Sbjct: 221 ISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHS 280

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V +      VY +G+G++GKLG G      TPQ
Sbjct: 281 VALTSS-HEVYTWGNGDHGKLGHGCGKKVSTPQ 312



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 2/94 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG  H+A V+S G L+T+G G YG+LGHG       P+RV +L  + V  ++CG  HT
Sbjct: 64  VTCGSYHTAAVSSKGNLFTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHT 123

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT-GLKPTPQ 506
             +  +G  +Y +GD E G  G G+T G + TP+
Sbjct: 124 AIVTSRG-CLYTWGDKENGVAGHGDTEGHQYTPK 156



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 16/126 (12%)

Query: 381 EGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           EG  +T ++   ++G + V L+            ACGF H+  +T  G +YT+G G +GR
Sbjct: 149 EGHQYTPKLLERLSGKRVVQLS------------ACGF-HTGCLTDAGEVYTWGEGKFGR 195

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN-- 498
           LGHG   N   P  V  L       +SCG  H+  +   GK +Y FG GE+G+LG G+  
Sbjct: 196 LGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGK-MYTFGGGEHGQLGHGDKV 254

Query: 499 TGLKPT 504
             +KPT
Sbjct: 255 NKVKPT 260



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 4/118 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G    G++      G S P    + +      IACG +H+A+VTS G LYT+G+ + G  
Sbjct: 84  GGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVA 143

Query: 442 GHGTTMNWKVPERVVAL--NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           GHG T   +   +++     K  V+  +CG  HT C+ D G+ VY +G+G++G+LG G
Sbjct: 144 GHGDTEGHQYTPKLLERLSGKRVVQLSACGF-HTGCLTDAGE-VYTWGEGKFGRLGHG 199



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 3/83 (3%)

Query: 425 TSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNHTVCIADKGKAV 483
           T  G +YT+G GD GRLGHG    WK VP    +L    +  V+CG  HT  ++ KG  +
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDN-GWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGN-L 80

Query: 484 YAFGDGEYGKLGLGNTGLKPTPQ 506
           + +G G YGKLG GN     TP+
Sbjct: 81  FTWGGGMYGKLGHGNESGHSTPK 103



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG+ HS  +TS+  +YT+GNGD+G+LGHG       P+ V  L    V  V+    HT
Sbjct: 273 ITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHT 332

Query: 474 VCIAD 478
            C+ +
Sbjct: 333 ACLVE 337



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 12/146 (8%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +     + +  I+ G  H +A++++ +V+ WGN    +LG G       PQLV  L  + 
Sbjct: 262 VKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQK 321

Query: 69  IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGL-----------PQDIPDHYGHLQN 117
           +  V++   H+A    P     +  H P + +++G             ++  D    ++N
Sbjct: 322 VVCVASYNEHTACLVEPHSVNASRRHAPGTMVQIGAGYLHDMKELVNDEEFSDVTFIVEN 381

Query: 118 KPLPLIRARL-KLLNRFSDLIYQVVR 142
           +P+  +RA L K    FS +    +R
Sbjct: 382 RPVHALRAILAKRCEHFSAMFRSGMR 407



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 37/67 (55%)

Query: 18  VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
           V IS G  H   V+  G+++ +G     QLG G+++N  +P LV  L    + Q++ G S
Sbjct: 219 VQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWS 278

Query: 78  HSAAWTA 84
           HS A T+
Sbjct: 279 HSVALTS 285



 Score = 45.1 bits (105), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 35/68 (51%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S    H   +++ G+V+ WG     +LG G + N   P+LV  L  K   Q+S G 
Sbjct: 166 VVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGG 225

Query: 77  SHSAAWTA 84
            HSA  TA
Sbjct: 226 FHSAVVTA 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 36/68 (52%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  ++ G+ H  AVS+ G +F WG     +LG GN+  +  P+ V +L    +  ++ G 
Sbjct: 61  ITHVTCGSYHTAAVSSKGNLFTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGS 120

Query: 77  SHSAAWTA 84
            H+A  T+
Sbjct: 121 RHTAIVTS 128



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           + + +   + +VDI+ G+ H   V++ G ++ WG+  +   G G+   ++  P+L+  LS
Sbjct: 103 KRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLS 162

Query: 66  NKNIRQVSAGRSHSAAWT 83
            K + Q+SA   H+   T
Sbjct: 163 GKRVVQLSACGFHTGCLT 180


>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
          Length = 1344

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 1/83 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HSA ++    LYT+G G YGRLGHG   + K P+ +  L++  +  VSCG  HT
Sbjct: 401 ISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHT 460

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + I  +G  VYAFG G+YGKLG+
Sbjct: 461 LAITGQG-TVYAFGQGKYGKLGI 482



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 1/98 (1%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           Y+   IACG  HS  +T    + T+G G  GRLGHG   +  VP+ +  L+K     +S 
Sbjct: 344 YFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISA 403

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           G +H+  I++K   +Y +G G YG+LG G    +  P+
Sbjct: 404 GESHSAAISEKLN-LYTWGTGTYGRLGHGMDTSEKKPK 440



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALSNK 67
            P    + I  I+ G EH+ A+S   ++F WG N + QLGLG   ++  EP L+  +++K
Sbjct: 662 FPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHK 721

Query: 68  NIRQVSAGRSHSAAWTA 84
           NI+ ++ G ++SAA +A
Sbjct: 722 NIQMIACGDNYSAAVSA 738



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH---VESVSCGL 470
           +ACG  H   +T +  L+++G+G YG LG GT  +   P  ++   K +   +E ++CG 
Sbjct: 294 VACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIACGK 353

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H++C+  K K +  +G G+ G+LG G+
Sbjct: 354 YHSMCLTRK-KKILTWGQGQGGRLGHGD 380



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G    GR+   +   +  P    +  QY    ++CG  H+  +T  G +Y FG G YG+L
Sbjct: 421 GTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKL 480

Query: 442 GHGTTMN------------WKV---PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAF 486
           G                  +KV   P+ ++  +K      + G NH++C+A  GK +Y++
Sbjct: 481 GINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSGK-IYSW 539

Query: 487 GDGEYGKLG 495
           G    G LG
Sbjct: 540 GYNGKGLLG 548



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 8/101 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           IACG  +SA V++ G L+  GN + G+LG G  +    +    +  N   ++SV+CG NH
Sbjct: 726 IACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIKSVACGPNH 785

Query: 473 TVCIAD-------KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + IAD       K    Y++G    G+LG+G+      P+
Sbjct: 786 MLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPK 826



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           IACG +H   ++    L+ +G  D G+LG G   ++   P  +  +   +++ ++CG N+
Sbjct: 673 IACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNY 732

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           +  ++  G+ ++  G+ E GKLGLG
Sbjct: 733 SAAVSAFGE-LFVTGNLENGKLGLG 756



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  I+ G  H + ++   ++  WG     +LG G++ +   P+ +  LS K    +SAG 
Sbjct: 346 IEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGE 405

Query: 77  SHSAA 81
           SHSAA
Sbjct: 406 SHSAA 410



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 32/64 (50%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           IS G  H  A+S    ++ WG  +  +LG G   + ++P+L+  L    I  VS G  H+
Sbjct: 401 ISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHT 460

Query: 80  AAWT 83
            A T
Sbjct: 461 LAIT 464



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 5/71 (7%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN----IRQV 72
           I  ++ G+ H+LA++   ++F+WG+     LG G + +  EP+  L +  K+    I  +
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRH-LIIEKKDYTYFIEGI 349

Query: 73  SAGRSHSAAWT 83
           + G+ HS   T
Sbjct: 350 ACGKYHSMCLT 360


>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
 gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
          Length = 710

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 5/96 (5%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGL 470
           +++CG+ H+AVVT +G LYTFG  +YG+LG  +    +   P++V  + K  V+ V CG 
Sbjct: 142 SVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGI-KEKVKFVVCGG 200

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK-PTP 505
            HT  IA+ G AVY FG+G  G+LG GN+ L+ PTP
Sbjct: 201 GHTTAIAESG-AVYTFGNGASGQLGHGNSLLESPTP 235



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 1/86 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            A+ACG +H+A+VT NG LYTFG+ D+G+LG G T     P  V +L     + V+CG +
Sbjct: 38  CAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRS 97

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HT+     GK VY +G G  G+LGLG
Sbjct: 98  HTLIATGDGK-VYVWGGGSEGQLGLG 122



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           + CG  H+  +  +G +YTFGNG  G+LGHG ++     P RV        +  SCG N 
Sbjct: 196 VVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENF 255

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  I  KG  +Y FGDG +GKLGLG+
Sbjct: 256 TAVITGKGH-LYTFGDGRHGKLGLGD 280



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLNH 472
           +CG   +AV+T  G+LYTFG+G +G+LG G     N   P +V   NK  V+ V+CG  H
Sbjct: 250 SCGENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACGGCH 309

Query: 473 TVCIA 477
            + IA
Sbjct: 310 MMVIA 314



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 39/68 (57%)

Query: 12 FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           +N  I  ++ G EH   V+  G+++ +G+N   QLGLG+     +P  V +L ++  + 
Sbjct: 32 IRNDRICAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKL 91

Query: 72 VSAGRSHS 79
          V+ GRSH+
Sbjct: 92 VACGRSHT 99



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 11/82 (13%)

Query: 424 VTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAV 483
           V   G ++TFG   +    + ++  W   +R+ A        V+CG  HT  + + G+ +
Sbjct: 8   VPETGAIFTFGKSKFAE--NISSKFWIRNDRICA--------VACGDEHTALVTENGR-L 56

Query: 484 YAFGDGEYGKLGLGNTGLKPTP 505
           Y FG  ++G+LGLG+T     P
Sbjct: 57  YTFGSNDWGQLGLGHTKTASKP 78



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G  H L  +  G+V+ WG  S+ QLGLG          +L   +K I  VS G  H+
Sbjct: 92  VACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDSKAI-SVSCGYYHT 150

Query: 80  AAWT 83
           A  T
Sbjct: 151 AVVT 154


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNH 472
           +ACG  HS  VT +G LYT+G GD+G LGHG  ++  VP+RV   L  +HV S++CG  H
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYH 424

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  +   G+ ++ FGDG +G LG G+
Sbjct: 425 TAVVTSAGQ-LFTFGDGTFGVLGHGD 449



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 416 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVW 475

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG GN   K  P
Sbjct: 476 HTAAVVEVMVGSSSSSNCSSGK-LFTWGDGDKGRLGHGNKEPKLVP 520



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+ +VT  G  +++G    GRLGHG   N + P+ + ALN  ++E V+CG  H+
Sbjct: 313 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHS 372

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G  +Y +G G++G LG GN
Sbjct: 373 CAVTLSGD-LYTWGKGDFGVLGHGN 396



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+ +  + K P RV   
Sbjct: 519 VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN-SHADGKTPNRVEGK 577

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE ++CG  H   +  + + VY +G G  G+LG G+   + +P
Sbjct: 578 LHKSFVEEIACGAYHVAVLTSRTE-VYTWGKGSNGRLGHGDVDDRNSP 624



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   +YT+G G  GRLGHG   +   P  V +L    V+S++CG N T
Sbjct: 586 IACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFT 645

Query: 474 --VCI 476
             VCI
Sbjct: 646 AAVCI 650



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 42/69 (60%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G +H + V+  G+ F+WG  S+ +LG G   N ++P+L+ AL+  NI  V+ 
Sbjct: 308 LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVAC 367

Query: 75  GRSHSAAWT 83
           G  HS A T
Sbjct: 368 GEFHSCAVT 376



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD GRLGHG      VP  V AL + +
Sbjct: 471 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN 530

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G  VY  G   YG+LG
Sbjct: 531 FCQVACGHSLTVALTTSGH-VYTMGSPVYGQLG 562



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  S+ +LG G+  +   P LV +L +K ++ ++ G 
Sbjct: 583 VEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGT 642

Query: 77  SHSAA 81
           + +AA
Sbjct: 643 NFTAA 647



 Score = 38.9 bits (89), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 12/89 (13%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  V  + G  H  AV             ++G++F WG+    +LG GN+  
Sbjct: 457 REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEP 516

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWT 83
              P  V AL   N  QV+ G S + A T
Sbjct: 517 KLVPTCVAALVEPNFCQVACGHSLTVALT 545


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNH 472
           +ACG  HS  VT +G LYT+G GD+G LGHG  ++  VP+RV   L  +HV S++CG  H
Sbjct: 352 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYH 411

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  +   G+ ++ FGDG +G LG G+
Sbjct: 412 TAVVTSAGQ-LFTFGDGTFGVLGHGD 436



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 403 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVW 462

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG GN   K  P
Sbjct: 463 HTAAVVEVMVGSSSSSNCSSGK-LFTWGDGDKGRLGHGNKEPKLVP 507



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+ +VT  G  +++G    GRLGHG   N + P+ + ALN  ++E V+CG  H+
Sbjct: 300 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHS 359

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G  +Y +G G++G LG GN
Sbjct: 360 CAVTLSGD-LYTWGKGDFGVLGHGN 383



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+ +  + K P RV   
Sbjct: 506 VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN-SHADGKTPNRVEGK 564

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE ++CG  H   +  + + VY +G G  G+LG G+   + +P
Sbjct: 565 LHKSFVEEIACGAYHVAVLTSRTE-VYTWGKGSNGRLGHGDVDDRNSP 611



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   +YT+G G  GRLGHG   +   P  V +L    V+S++CG N T
Sbjct: 573 IACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFT 632

Query: 474 --VCI 476
             VCI
Sbjct: 633 AAVCI 637



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 42/69 (60%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G +H + V+  G+ F+WG  S+ +LG G   N ++P+L+ AL+  NI  V+ 
Sbjct: 295 LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVAC 354

Query: 75  GRSHSAAWT 83
           G  HS A T
Sbjct: 355 GEFHSCAVT 363



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD GRLGHG      VP  V AL + +
Sbjct: 458 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN 517

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G  VY  G   YG+LG
Sbjct: 518 FCQVACGHSLTVALTTSGH-VYTMGSPVYGQLG 549



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  S+ +LG G+  +   P LV +L +K ++ ++ G 
Sbjct: 570 VEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGT 629

Query: 77  SHSAA 81
           + +AA
Sbjct: 630 NFTAA 634



 Score = 38.5 bits (88), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 12/89 (13%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  V  + G  H  AV             ++G++F WG+    +LG GN+  
Sbjct: 444 REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEP 503

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWT 83
              P  V AL   N  QV+ G S + A T
Sbjct: 504 KLVPTCVAALVEPNFCQVACGHSLTVALT 532


>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2041

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 43/106 (40%), Positives = 64/106 (60%), Gaps = 7/106 (6%)

Query: 401 LTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           LTF +R +     + CG +HSA +T+N  LYT+GNGDY RLGHG  ++   P+++  L  
Sbjct: 396 LTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQD 455

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V+V  V+ G  H++CI ++G  VYA+G  +   LG+      PT Q
Sbjct: 456 VYVLDVALGTIHSLCITNEG-FVYAWGSSKDSVLGM------PTQQ 494



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE---PQLVLA 63
           + I   ++++++D+++GT H L ++N G V+AWG++ D+ LG+  Q  Y++   PQ V  
Sbjct: 448 KKIEILQDVYVLDVALGTIHSLCITNEGFVYAWGSSKDSVLGMPTQ-QYKDQTLPQRVGL 506

Query: 64  LS----NKNIRQVSAGRSHS 79
           +S    + +  QV+AG SHS
Sbjct: 507 MSQSFRDASFYQVAAGTSHS 526



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN--KVHVESVSCGLN 471
           IA G  HS  +  N  +Y +G  + G+LG G   N  +P+++   +  K+  + + CG  
Sbjct: 355 IAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQ 414

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           H+ CI    K +Y +G+G+Y +LG G
Sbjct: 415 HSACIT-TNKELYTWGNGDYYRLGHG 439



 Score = 49.3 bits (116), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+  +T  G ++ +G G  G LG+G   + + P + + ++ +    ++ G  H+
Sbjct: 304 IVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQ-IDISGLFFNEIAAGAYHS 362

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + +A K   VY +G    G+LG+GN
Sbjct: 363 LALA-KNNQVYGWGVNNRGQLGIGN 386



 Score = 46.2 bits (108), Expect = 0.043,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 19  DISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI--RQVSAGR 76
           +I+ G  H LA++   QV+ WG N+  QLG+GN+ N   P+ +     K I  + +  G 
Sbjct: 354 EIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGD 413

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 414 QHSACIT 420



 Score = 43.1 bits (100), Expect = 0.33,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
           G K SA++T  G +++FG  ++G LGH     + + E  +  +   + +++C  N T+  
Sbjct: 750 GEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDIPSMINLACS-NQTMFA 808

Query: 477 ADKGKAVYAFGDGEYGKLGL 496
            D+ + ++A+G+ ++G+LG+
Sbjct: 809 IDQKQQLWAWGNNQFGQLGI 828



 Score = 39.7 bits (91), Expect = 3.3,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL--ALSNKNI 69
           F+N  I  IS    H +AV+  G  + WG+N   QLGLG Q ++    ++L  A+  K I
Sbjct: 685 FRNTIIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVI 744

Query: 70  RQVSAGRSHSAAWT 83
                G   SA  T
Sbjct: 745 IMAITGEKFSALLT 758


>gi|357125848|ref|XP_003564601.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
           2 [Brachypodium distachyon]
          Length = 518

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 1/131 (0%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C E A +       + G ++     +  +     AIACG +HS VVT +G L TFG 
Sbjct: 308 PIPCIESALYGKDRPAAMKGNKNAETQISKVMGNCVKAIACGGRHSVVVTDSGTLLTFGW 367

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G T +   P  V ++  V +E  + GL HTVCI+  G  VY+FG  ++G+LG
Sbjct: 368 GLYGQCGQGNTDDVLSPTCVSSILGVKMEGAAAGLWHTVCISVDGD-VYSFGGNQFGQLG 426

Query: 496 LGNTGLKPTPQ 506
            G+   +  P+
Sbjct: 427 TGSDEAETVPK 437



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-- 457
           P   ++ L       A G  H+  ++ +G +Y+FG   +G+LG G+     VP+ V A  
Sbjct: 384 PTCVSSILGVKMEGAAAGLWHTVCISVDGDVYSFGGNQFGQLGTGSDEAETVPKLVDASC 443

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           L   +  +VSCG  H+  I D+ + V+ +G  +YG+LGLG++
Sbjct: 444 LENKNARTVSCGARHSAIITDESE-VFCWGWNKYGQLGLGDS 484



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 3/85 (3%)

Query: 397 QSVP-LTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           ++VP L  A+ L+   A  ++CG +HSA++T    ++ +G   YG+LG G +M+  VP  
Sbjct: 433 ETVPKLVDASCLENKNARTVSCGARHSAIITDESEVFCWGWNKYGQLGLGDSMDRNVP-C 491

Query: 455 VVALNKVHVESVSCGLNHTVCIADK 479
           +V ++     +VSCG  HT+ +A+ 
Sbjct: 492 IVPMDAYRALNVSCGWWHTLVLAES 516



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   + +   + G  H + +S  G V+++G N   QLG G+      P+LV A  L N
Sbjct: 387 VSSILGVKMEGAAAGLWHTVCISVDGDVYSFGGNQFGQLGTGSDEAETVPKLVDASCLEN 446

Query: 67  KNIRQVSAGRSHSA 80
           KN R VS G  HSA
Sbjct: 447 KNARTVSCGARHSA 460



 Score = 41.6 bits (96), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
           + I  ++ G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 262 VKITAVAAGGRHTLALSDFGQVWGWGYGGEGQLGLGSRI 300


>gi|255566472|ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
 gi|223536498|gb|EEF38145.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
          Length = 476

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 69/131 (52%), Gaps = 1/131 (0%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C + +    R  P   GG +           Y   IACG +HSAV+T  G L TFG 
Sbjct: 266 PVPCVDPSYGKDRPAPFSRGGMTSEGHGFRVPGSYVKGIACGGRHSAVITDAGALLTFGW 325

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G+T +   P  V  L  + +  V+ GL HT+C++  G  VYAFG  ++G+LG
Sbjct: 326 GLYGQCGQGSTDDELSPICVSPLLGIRIAGVAAGLWHTICVSADGD-VYAFGGNQFGQLG 384

Query: 496 LGNTGLKPTPQ 506
            G+   + TP+
Sbjct: 385 TGSDQAETTPR 395



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 3/101 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-- 457
           P+  +  L    A +A G  H+  V+++G +Y FG   +G+LG G+      P  + A  
Sbjct: 342 PICVSPLLGIRIAGVAAGLWHTICVSADGDVYAFGGNQFGQLGTGSDQAETTPRLLDAPS 401

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           L  +H + VSCG  H+  +A+ GK V+ +G  +YG+LGLG+
Sbjct: 402 LEDIHAKVVSCGARHSAIVAEDGK-VFCWGWNKYGQLGLGD 441



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           P+ ++IH   +S G  H   V+  G+VF WG N   QLGLG+ I+   P  V  +     
Sbjct: 400 PSLEDIHAKVVSCGARHSAIVAEDGKVFCWGWNKYGQLGLGDVIDRNIPSPV-TIEGCIP 458

Query: 70  RQVSAGRSHS 79
           R V+ G  H+
Sbjct: 459 RNVACGWWHT 468



 Score = 45.4 bits (106), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSA+V  +G ++ +G   YG+LG G  ++  +P  V  +      +V+CG  HT
Sbjct: 410 VSCGARHSAIVAEDGKVFCWGWNKYGQLGLGDVIDRNIPSPVT-IEGCIPRNVACGWWHT 468

Query: 474 VCIADK 479
           + +A+ 
Sbjct: 469 LLLAES 474



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI--RQ 71
            I I  ++ G  H + VS  G V+A+G N   QLG G+      P+L+ A S ++I  + 
Sbjct: 350 GIRIAGVAAGLWHTICVSADGDVYAFGGNQFGQLGTGSDQAETTPRLLDAPSLEDIHAKV 409

Query: 72  VSAGRSHSA 80
           VS G  HSA
Sbjct: 410 VSCGARHSA 418



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
            + I  ++ G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 219 GVRITTVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 258


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNH 472
           +ACG  HS  VT +G LYT+G GD+G LGHG  ++  VP+RV   +  +HV S++CG  H
Sbjct: 364 VACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYH 423

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  +   G+ ++ FGDG +G LG G+
Sbjct: 424 TAVVTSAGQ-LFTFGDGTFGVLGHGD 448



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+ +VT  G  +++G    GRLGHG   N + P+ + AL+  ++E V+CG  H+
Sbjct: 312 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHS 371

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G  +Y +G G++G LG GN
Sbjct: 372 CAVTLSGD-LYTWGKGDFGILGHGN 395



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 415 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 474

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+  +LG G+   K  P
Sbjct: 475 HTAAVVEVMVGSSSSSNCSSGK-LFTWGDGDKSRLGHGDKEPKLVP 519



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+    + KVP RV   
Sbjct: 518 VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PHADGKVPTRVEGK 576

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE ++CG  H   +  + + VY +G G  G+LG G+   + +P
Sbjct: 577 LHKSFVEEIACGAYHVAVLTSRTE-VYTWGKGSNGRLGHGDADDRNSP 623



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)

Query: 399 VPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           VP     +L + +   IACG  H AV+TS   +YT+G G  GRLGHG   +   P  V +
Sbjct: 569 VPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVES 628

Query: 458 LNKVHVESVSCGLNHTVCIA 477
           L    V+S++CG N T  + 
Sbjct: 629 LKDKQVKSIACGSNFTAAVC 648



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I+ G +H + V+  G+ F+WG  S+ +LG G   N + P+L+ ALS  NI  V+ G  HS
Sbjct: 312 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHS 371

Query: 80  AAWT 83
            A T
Sbjct: 372 CAVT 375



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD  RLGHG      VP  V AL + +
Sbjct: 470 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPN 529

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G  VY  G   YG+LG
Sbjct: 530 FCQVACGHSLTVALTTSGH-VYTMGSPVYGQLG 561



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  S+ +LG G+  +   P LV +L +K ++ ++ G 
Sbjct: 582 VEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGS 641

Query: 77  SHSAA 81
           + +AA
Sbjct: 642 NFTAA 646


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNH 472
           +ACG  HS  VT +G LYT+G GD+G LGHG  ++  VP+RV   L  +HV S++CG  H
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYH 424

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  +   G+ ++ FGDG +G LG G+
Sbjct: 425 TAVVTSAGQ-LFTFGDGTFGVLGHGD 449



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 416 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVW 475

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG GN   K  P
Sbjct: 476 HTAAVVEVMVGSSSSSNCSSGK-LFTWGDGDKGRLGHGNKEPKLVP 520



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+ +VT  G  +++G    GRLGHG   N + P+ + ALN  ++E V+CG  H+
Sbjct: 313 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHS 372

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G  +Y +G G++G LG GN
Sbjct: 373 CAVTLSGD-LYTWGKGDFGVLGHGN 396



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+ +  + K+P RV   
Sbjct: 519 VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN-SHADGKLPNRVEGK 577

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE ++CG  H   +  + + VY +G G  G+LG G+   + +P
Sbjct: 578 LHKSFVEEIACGAYHVAVLTSRTE-VYTWGKGSNGRLGHGDVDDRNSP 624



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   +YT+G G  GRLGHG   +   P  V +L    V+S++CG N T
Sbjct: 586 IACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFT 645

Query: 474 --VCI 476
             VCI
Sbjct: 646 AAVCI 650



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 42/69 (60%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G +H + V+  G+ F+WG  S+ +LG G   N ++P+L+ AL+  NI  V+ 
Sbjct: 308 LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVAC 367

Query: 75  GRSHSAAWT 83
           G  HS A T
Sbjct: 368 GEFHSCAVT 376



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD GRLGHG      VP  V AL + +
Sbjct: 471 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN 530

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G  VY  G   YG+LG
Sbjct: 531 FCQVACGHSLTVALTTSGH-VYTMGSPVYGQLG 562



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  S+ +LG G+  +   P LV +L +K ++ ++ G 
Sbjct: 583 VEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGT 642

Query: 77  SHSAA 81
           + +AA
Sbjct: 643 NFTAA 647



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 87/232 (37%), Gaps = 54/232 (23%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  V  + G  H  AV             ++G++F WG+    +LG GN+  
Sbjct: 457 REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEP 516

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGH 114
              P  V AL   N  QV+ G S + A T       T GH  +    +G P      YG 
Sbjct: 517 KLVPTCVAALVEPNFCQVACGHSLTVALT-------TSGHVYT----MGSPV-----YGQ 560

Query: 115 LQNK----PLPLIRARLKLLNRFSDLI----YQVVRLLPLGNVDQDWVQCTPYSW----- 161
           L N      LP  R   KL   F + I    Y V  L     V         Y+W     
Sbjct: 561 LGNSHADGKLP-NRVEGKLHKSFVEEIACGAYHVAVLTSRTEV---------YTWGKGSN 610

Query: 162 --LVHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTV 211
             L H  +    +P +      + V K++  G NF  +V + R  +   Q++
Sbjct: 611 GRLGHGDVDDRNSPTLVESLKDKQV-KSIACGTNFTAAVCIHRWASGMDQSM 661


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           I CG  +SA +T++G L+T+G G+YGRLGHG++ +   P  VV+L    V  + CG    
Sbjct: 300 IVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDA 359

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + D G  V+++GDG+YGKLG G +    TP+
Sbjct: 360 QTLAVTDDG-TVWSWGDGDYGKLGRGGSDGCKTPK 393



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 5/91 (5%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV----HVESVSCGLNHTV 474
           KH   +TS G +Y++GNGD GRLGHG T + + P  V  L+      HV  + CG  ++ 
Sbjct: 249 KHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSA 308

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            I   G+ ++ +G G YG+LG G++  + TP
Sbjct: 309 AITADGE-LFTWGRGNYGRLGHGSSEDQLTP 338



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 2/102 (1%)

Query: 405 NRLQYYE-AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +RLQ  +   + CG + S  +T  G+++T+G GD  RLGHGT  + + P+++  L    V
Sbjct: 396 DRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKV 455

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             V+ G  H + + ++G+ VY +G  + G+LG  +   K  P
Sbjct: 456 VDVAVGSMHCLVMTEEGE-VYGWGRNDQGQLGDSSFSTKSDP 496



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 7/88 (7%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           KH   +TS G +Y++GNGD GRLGHG T + +K  + +V +   H E       H + + 
Sbjct: 201 KHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLVIVYPYHPEG-----KHYMALT 255

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +G+ VY++G+G+ G+LG G+T  +  P
Sbjct: 256 SEGE-VYSWGNGDGGRLGHGDTNSREEP 282



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + +   +   +VD++VG+ H L ++  G+V+ WG N   QLG  +     +P L + L  
Sbjct: 445 KQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTL-MPLDG 503

Query: 67  KNIRQVSAGRSHSAAWTA 84
           K+I  ++ G + S  WT+
Sbjct: 504 KSISGIACGPAQSFCWTS 521



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I CG     +  VT +G ++++G+GDYG+LG G +   K P+ +  L    +  V CG  
Sbjct: 352 ICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQ 411

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
            ++ +   G  ++ +G G+  +LG G
Sbjct: 412 FSLALTKTGH-IWTWGKGDSQRLGHG 436



 Score = 45.4 bits (106), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 4/64 (6%)

Query: 25  EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK----NIRQVSAGRSHSA 80
           +H +A+++ G+V++WGN    +LG G+  +  EP LV  LS K    ++  +  G ++SA
Sbjct: 249 KHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSA 308

Query: 81  AWTA 84
           A TA
Sbjct: 309 AITA 312



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 9/103 (8%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + K   ++DI  G+     LAV++ G V++WG+    +LG G     + P+++  L  
Sbjct: 341 VVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQG 400

Query: 67  KNIRQVSAGRSHSAA-------WTAPPLPPHTPGHTPSSSLRL 102
           ++I +V  G   S A       WT         GH     +R 
Sbjct: 401 QDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRF 443



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 35/75 (46%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   +   IV +  G +  LA++ TG ++ WG     +LG G + + R P+ +  L  K 
Sbjct: 395 IDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKK 454

Query: 69  IRQVSAGRSHSAAWT 83
           +  V+ G  H    T
Sbjct: 455 VVDVAVGSMHCLVMT 469



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 33/60 (55%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H+V I  G+ +  A++  G++F WG  +  +LG G+  +   P LV++L  + +  +  G
Sbjct: 296 HVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCG 355


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNH 472
           +ACG  HS  VT +G LYT+G GD+G LGHG  ++  VP+RV   +  +HV S++CG  H
Sbjct: 369 VACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYH 428

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  +   G+ ++ FGDG +G LG G+
Sbjct: 429 TAVVTSAGQ-LFTFGDGTFGVLGHGD 453



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+ +VT  G  +++G    GRLGHG   N + P+ + ALN  ++E V+CG  H+
Sbjct: 317 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHS 376

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G  +Y +G G++G LG GN
Sbjct: 377 CAVTLSGD-LYTWGKGDFGILGHGN 400



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 420 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 479

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+  +LG G+   K  P
Sbjct: 480 HTAAVVEVMVGSSSSSNCSSGK-LFTWGDGDKSRLGHGDKEPKLVP 524



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+    + KVP RV   
Sbjct: 523 VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PHADGKVPTRVDGK 581

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE ++CG  H   +  + + VY +G G  G+LG G+   + +P
Sbjct: 582 LHKSFVEEIACGAYHVAVLTSRTE-VYTWGKGSNGRLGHGDADDRNSP 628



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)

Query: 399 VPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           VP     +L + +   IACG  H AV+TS   +YT+G G  GRLGHG   +   P  V +
Sbjct: 574 VPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVES 633

Query: 458 LNKVHVESVSCGLNHTVCIA 477
           L    V+S++CG N T  + 
Sbjct: 634 LKDKQVKSIACGSNFTAAVC 653



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 41/69 (59%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G +H + V+  G+ F+WG  S+ +LG G   N + P+L+ AL+  NI  V+ 
Sbjct: 312 LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVAC 371

Query: 75  GRSHSAAWT 83
           G  HS A T
Sbjct: 372 GEYHSCAVT 380



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD  RLGHG      VP  V AL + +
Sbjct: 475 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPN 534

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G  VY  G   YG+LG
Sbjct: 535 FCQVACGHSLTVALTTSGH-VYTMGSPVYGQLG 566



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  S+ +LG G+  +   P LV +L +K ++ ++ G 
Sbjct: 587 VEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGS 646

Query: 77  SHSAA 81
           + +AA
Sbjct: 647 NFTAA 651


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 11/119 (9%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+S T +   I+ G    PL  A R+      ++ G++HSA VT  G L+T+G GDYGRL
Sbjct: 405 GSSLTHKSPKIIEG----PL--ARRIV---VCVSAGYRHSACVTQEGQLFTWGEGDYGRL 455

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           G G   +  VP  V+  +     SV CG +HT+ +A  G  V++FG G+ GKLG G+T 
Sbjct: 456 GLGDNTSRNVP--VLVKDIASAGSVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTS 512



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 58/87 (66%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+  +T+ G ++++G+GDYG+LGHG+++  K P+ +   L +  V  VS G  H+ C+  
Sbjct: 381 HTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQ 440

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +G+ ++ +G+G+YG+LGLG+   +  P
Sbjct: 441 EGQ-LFTWGEGDYGRLGLGDNTSRNVP 466



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNKNIRQVSAG 75
           +VDI+ G  H +A+++  +V+ WGNN+  Q GLG+  +    P  V  L+N  I Q+SAG
Sbjct: 579 VVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHTNSPISVPTQVQQLNNVTIHQISAG 638

Query: 76  RSHSAAWTAPPLPPH 90
            SHS A+TA P   H
Sbjct: 639 TSHSIAYTAMPSDRH 653



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 13/110 (11%)

Query: 402 TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV----- 456
           +F N  Q  EA   C F     V+ +G + + G G YGRLG G + N    + +V     
Sbjct: 313 SFGNS-QMLEAGQYCTF----AVSGDGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQ 367

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + K+     S G  HT+ +  +G  ++++GDG+YGKLG G++    +P+
Sbjct: 368 TIRKISSSKGSDG--HTLALTTEG-CIFSWGDGDYGKLGHGSSLTHKSPK 414



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 7/96 (7%)

Query: 413 AIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++ CG  H+ V+  +G  +++FG GD G+LGHG T     P+ + ++N +    +  G  
Sbjct: 477 SVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQ 536

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN---TGLKPT 504
           +++ + D G+ V+++G G    LG G+   T +KPT
Sbjct: 537 YSLALNDSGQ-VFSWGCG--ACLGCGSPDATFMKPT 569



 Score = 42.0 bits (97), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
           + I  +  S G++ H LA++  G +F+WG+    +LG G+ + ++ P+++   L+ + + 
Sbjct: 367 QTIRKISSSKGSDGHTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVV 426

Query: 71  QVSAGRSHSAAWT 83
            VSAG  HSA  T
Sbjct: 427 CVSAGYRHSACVT 439



 Score = 38.5 bits (88), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           I  G  H   +T N  +Y +GN   G+ G G T +   VP +V  LN V +  +S G +H
Sbjct: 582 ITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHTNSPISVPTQVQQLNNVTIHQISAGTSH 641

Query: 473 TV 474
           ++
Sbjct: 642 SI 643


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNH 472
           +ACG  HS  VT +G LYT+G GD+G LGHG  ++  VP+RV   +  +HV S++CG  H
Sbjct: 403 VACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYH 462

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  +   G+ ++ FGDG +G LG G+
Sbjct: 463 TAVVTSAGQ-LFTFGDGTFGVLGHGD 487



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+ +VT  G  +++G    GRLGHG   N + P+ + ALN  ++E V+CG  H+
Sbjct: 351 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHS 410

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G  +Y +G G++G LG GN
Sbjct: 411 CAVTLSGD-LYTWGKGDFGILGHGN 434



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 454 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 513

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+  +LG G+   K  P
Sbjct: 514 HTAAVVEVMVGSSSSSNCSSGK-LFTWGDGDKSRLGHGDKEPKLVP 558



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+    + KVP RV   
Sbjct: 557 VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PHADGKVPTRVDGK 615

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE ++CG  H   +  + + VY +G G  G+LG G+   + +P
Sbjct: 616 LHKSFVEEIACGAYHVAVLTSRTE-VYTWGKGSNGRLGHGDADDRNSP 662



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)

Query: 399 VPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           VP     +L + +   IACG  H AV+TS   +YT+G G  GRLGHG   +   P  V +
Sbjct: 608 VPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVES 667

Query: 458 LNKVHVESVSCGLNHTVCIA 477
           L    V+S++CG N T  + 
Sbjct: 668 LKDKQVKSIACGSNFTAAVC 687



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 41/69 (59%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G +H + V+  G+ F+WG  S+ +LG G   N + P+L+ AL+  NI  V+ 
Sbjct: 346 LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVAC 405

Query: 75  GRSHSAAWT 83
           G  HS A T
Sbjct: 406 GEYHSCAVT 414



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD  RLGHG      VP  V AL + +
Sbjct: 509 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPN 568

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G  VY  G   YG+LG
Sbjct: 569 FCQVACGHSLTVALTTSGH-VYTMGSPVYGQLG 600



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  S+ +LG G+  +   P LV +L +K ++ ++ G 
Sbjct: 621 VEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGS 680

Query: 77  SHSAA 81
           + +AA
Sbjct: 681 NFTAA 685


>gi|356501083|ref|XP_003519358.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 477

 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 1/88 (1%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           Y   IACG +HSAV+T  G L TFG G YG+ G G T +   P  V +L  +H+E ++ G
Sbjct: 301 YIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGITDDELSPTCVSSLLGIHIEGIAAG 360

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           L HTVC +  G  VYAFG  ++G+LG G
Sbjct: 361 LWHTVCTSADGD-VYAFGGNQFGQLGTG 387



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
           G+    +T  +  P   ++ L  +   IA G  H+   +++G +Y FG   +G+LG G  
Sbjct: 330 GQCGQGITDDELSPTCVSSLLGIHIEGIAAGLWHTVCTSADGDVYAFGGNQFGQLGTGAD 389

Query: 447 MNWKVPERVV--ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
               +P  V   +L  +H +++SCG  HT  + + GK V+ +G  +YG+LGLG+
Sbjct: 390 QAETLPRLVDSPSLKNLHAKNISCGARHTALVTEGGK-VFCWGWNKYGQLGLGD 442



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 30/52 (57%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           P+ KN+H  +IS G  H   V+  G+VF WG N   QLGLG+ I+   P  V
Sbjct: 401 PSLKNLHAKNISCGARHTALVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEV 452



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A+VT  G ++ +G   YG+LG G  ++  +P  V     V  ++V+CG  HT
Sbjct: 411 ISCGARHTALVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVP-KNVACGWWHT 469

Query: 474 VCIADK 479
           + +A+ 
Sbjct: 470 LLLAES 475



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLV 61
            I I  ++ G  H LA+S+TG V+AWG   + QLGLG++I     P LV
Sbjct: 219 GIRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRMVSTPHLV 267



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + +   IHI  I+ G  H +  S  G V+A+G N   QLG G       P+LV + S KN
Sbjct: 346 VSSLLGIHIEGIAAGLWHTVCTSADGDVYAFGGNQFGQLGTGADQAETLPRLVDSPSLKN 405

Query: 69  I--RQVSAGRSHSA 80
           +  + +S G  H+A
Sbjct: 406 LHAKNISCGARHTA 419



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 29/122 (23%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--------------NWKVPERVVA 457
           A++A G +H+  ++  G ++ +G G  G+LG G+ +              ++ V +R   
Sbjct: 223 ASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYVKDRSAT 282

Query: 458 LNK--------------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
           L +               +++ ++CG  H+  I D G A+  FG G YG+ G G T  + 
Sbjct: 283 LARGNMGSEGQTFRIPGSYIKRIACGGRHSAVITDAG-ALLTFGWGLYGQCGQGITDDEL 341

Query: 504 TP 505
           +P
Sbjct: 342 SP 343


>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
          Length = 727

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG +H+  VT    +YTFG G +G+LGHGT     ++P+ V  L K  +  V+CG NH
Sbjct: 250 VSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENH 308

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I DKG  +Y FGDG +GKLGLG
Sbjct: 309 TAVITDKG-LLYTFGDGRHGKLGLG 332



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 7/87 (8%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALN-KVHVESVSCGL 470
           I+CG+ HSA VT +G LYTFG  + G+LG         K P+RV  L+ KV +  VSCG 
Sbjct: 197 ISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKI--VSCGG 254

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            HT+ + +  K VY FG G++G+LG G
Sbjct: 255 EHTIAVTE--KEVYTFGLGQFGQLGHG 279



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+CG +H+ +VT NG LY FG+ ++G+LG         P  V AL    V   SCG N
Sbjct: 40  AHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRN 99

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           HT+   ++GK +Y+ G    G+LGLG+T
Sbjct: 100 HTLLYTEQGK-LYSSGGNSEGQLGLGDT 126



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           + CG  H+AV+T  G LYTFG+G +G+LG G     N  VP       K  V+SV+CG  
Sbjct: 302 VTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGC 361

Query: 472 HTVCIA 477
           H +  A
Sbjct: 362 HMLVFA 367



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 401 LTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           ++F N  QY    ++ G   SA +T +G L+ +G+   G+LG      +  P+++     
Sbjct: 135 ISFFN-TQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKP 193

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           +    +SCG  H+  +   G+ +Y FG+ E GKLGL +  LK
Sbjct: 194 ISW--ISCGYYHSAFVTQDGE-LYTFGEPENGKLGLPSDKLK 232



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK- 67
           + A K+  +V  S G  H L  +  G++++ G NS+ QLGLG+       Q +   + + 
Sbjct: 83  VKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQY 142

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 143 KIKQLSAGSNTSAALT 158



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+    KN     IS G EH + V+  G+++ +G+N+  QLGL       +P  V 
Sbjct: 25  AENIPSKFWLKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVK 84

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL ++ +   S GR+H+  +T
Sbjct: 85  ALKSEKVVFASCGRNHTLLYT 105



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 4   TSGRHIPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           TS + I  F   + I  +S G+    A++  G++F WG+NS+ QLGL  +  Y  PQ + 
Sbjct: 130 TSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKID 189

Query: 63  ALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
               K I  +S G  HSA  T      +T G   +   +LGLP D
Sbjct: 190 I--GKPISWISCGYYHSAFVTQDG-ELYTFGEPENG--KLGLPSD 229


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 1/80 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           + + +++HIVDIS+G  H LA+S   +V++WGNN+  Q GLG+       P  VLAL   
Sbjct: 623 VESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCGLGHCFTPVSLPTKVLALDGI 682

Query: 68  NIRQVSAGRSHSAAWTAPPL 87
            I Q+S G SHS AWT PPL
Sbjct: 683 KIEQISTGTSHSFAWTTPPL 702



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G +HSA +T +G LYT+G G++GRLGHG +   +VP  V +++      V+ G +HT
Sbjct: 480 ISAGSRHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTLVRSIDA--ASQVAAGCSHT 537

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V ++     V+ FG G+ GKLG GNT ++  P+
Sbjct: 538 VVLSKDEMTVWTFGAGDNGKLGHGNTKMEYYPK 570



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES-VSCGLNHTVCIAD 478
           H+  +T NG +Y++G+G++G+LGHG     K+P+ +  + K  + + +S G  H+  I  
Sbjct: 433 HTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITK 492

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G  +Y +G+GE+G+LG G++ ++  P
Sbjct: 493 DGD-LYTWGEGEHGRLGHGDSSIQRVP 518



 Score = 50.8 bits (120), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 8/106 (7%)

Query: 403 FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV- 461
           F N +Q  EA   C F     +  +G L+  G G +G+LG G + + +   ++   N+  
Sbjct: 367 FKNAIQL-EAGQYCTF----ALFDDGSLHACGKGSHGKLGLGDSSSKQCLHKLNLFNQNI 421

Query: 462 -HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + S     +HT+ +   G  VY++GDGE+GKLG GN   +  P+
Sbjct: 422 DQISSSKGSDSHTLALTKNG-VVYSWGDGEFGKLGHGNVATQKLPK 466



 Score = 46.6 bits (109), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 13  KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL-SNKNIR 70
           +NI  +  S G++ H LA++  G V++WG+    +LG GN    + P+++  +  N+ I 
Sbjct: 419 QNIDQISSSKGSDSHTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIIT 478

Query: 71  QVSAGRSHSAAWT 83
            +SAG  HSAA T
Sbjct: 479 FISAGSRHSAAIT 491



 Score = 46.6 bits (109), Expect = 0.031,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN  I  IS G+ H  A++  G ++ WG     +LG G+    R P LV ++   +  Q
Sbjct: 472 FKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAAS--Q 529

Query: 72  VSAGRSHS 79
           V+AG SH+
Sbjct: 530 VAAGCSHT 537



 Score = 44.7 bits (104), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 412 AAIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + +A G  H+ V++ +   ++TFG GD G+LGHG T     P+ V AL  + ++ ++ G 
Sbjct: 528 SQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGT 587

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
             ++ +   G  +Y +G G    LG+G
Sbjct: 588 QCSIALTWTG-FIYVWGCGPC--LGVG 611



 Score = 39.7 bits (91), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G + S  +T  G++Y +G G    +G    ++  +P+ V +L  VH+  +S G  H 
Sbjct: 583 IAAGTQCSIALTWTGFIYVWGCGPCLGVGAADAVHL-LPKIVESLRDVHIVDISLGDCHC 641

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + ++     VY++G+   G+ GLG+
Sbjct: 642 LALS-ADHEVYSWGNNNMGQCGLGH 665


>gi|168037867|ref|XP_001771424.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677342|gb|EDQ63814.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 465

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIACG +HSAVVT  G L TFG G +G++G G+T +   P  V  +  + +  ++ GL H
Sbjct: 273 AIACGGRHSAVVTDAGALLTFGWGLHGQVGQGSTEDELSPCCVSTIGGLRIVGIAAGLWH 332

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           T+CI D G  VYAFG  ++G+LG+G    + +P+
Sbjct: 333 TLCITDVGD-VYAFGGNQFGQLGVGGNAAELSPR 365



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG +HSAV+T +G ++ +G   YG+LG G   N  +P +V   +     S++CG  HT
Sbjct: 380 VACGARHSAVLTGSGKIFAWGWNKYGQLGLGDCNNRDLPVQVTMNDGGRAASIACGWWHT 439

Query: 474 V 474
           +
Sbjct: 440 L 440



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 15/81 (18%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALS-------- 65
           I I  ++ G  H LA+S+ G V+AWG   D QLGLG+++     PQ +  L+        
Sbjct: 202 IRIASVAAGGRHTLALSDVGHVWAWGYGGDGQLGLGSRMRIVSSPQQIPCLNLTEKAVAR 261

Query: 66  ------NKNIRQVSAGRSHSA 80
                  K I+ ++ G  HSA
Sbjct: 262 SGVPIPGKCIKAIACGGRHSA 282



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           +     + IV I+ G  H L +++ G V+A+G N   QLG+G       P+++ A  L +
Sbjct: 315 VSTIGGLRIVGIAAGLWHTLCITDVGDVYAFGGNQFGQLGVGGNAAELSPRMIDAPLLED 374

Query: 67  KNIRQVSAGRSHSAAWTA 84
           ++  +V+ G  HSA  T 
Sbjct: 375 ESCVEVACGARHSAVLTG 392



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 16/103 (15%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVH-------- 462
           A++A G +H+  ++  G+++ +G G  G+LG G+ M     P+++  LN           
Sbjct: 205 ASVAAGGRHTLALSDVGHVWAWGYGGDGQLGLGSRMRIVSSPQQIPCLNLTEKAVARSGV 264

Query: 463 ------VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
                 +++++CG  H+  + D G A+  FG G +G++G G+T
Sbjct: 265 PIPGKCIKAIACGGRHSAVVTDAG-ALLTFGWGLHGQVGQGST 306



 Score = 42.4 bits (98), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 35/72 (48%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           P  ++   V+++ G  H   ++ +G++FAWG N   QLGLG+  N   P  V        
Sbjct: 370 PLLEDESCVEVACGARHSAVLTGSGKIFAWGWNKYGQLGLGDCNNRDLPVQVTMNDGGRA 429

Query: 70  RQVSAGRSHSAA 81
             ++ G  H+ A
Sbjct: 430 ASIACGWWHTLA 441


>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
 gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
          Length = 727

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG +H+  VT    +YTFG G +G+LGHGT     ++P+ V  L K  +  V+CG NH
Sbjct: 250 VSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENH 308

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I DKG  +Y FGDG +GKLGLG
Sbjct: 309 TAVITDKG-LLYTFGDGRHGKLGLG 332



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 7/87 (8%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALN-KVHVESVSCGL 470
           I+CG+ HSA VT +G LYTFG  + G+LG         K P+RV  L+ KV +  VSCG 
Sbjct: 197 ISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKI--VSCGG 254

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            HT+ + +  K VY FG G++G+LG G
Sbjct: 255 EHTIAVTE--KEVYTFGLGQFGQLGHG 279



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+CG +H+ +VT NG LY FG+ ++G+LG         P  V AL    V   SCG N
Sbjct: 40  AHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRN 99

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           HT+   ++GK +Y+ G    G+LGLG+T
Sbjct: 100 HTLLYTEQGK-LYSSGGNSEGQLGLGDT 126



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           + CG  H+AV+T  G LYTFG+G +G+LG G     N  VP       K  V+SV+CG  
Sbjct: 302 VTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGC 361

Query: 472 HTVCIA 477
           H +  A
Sbjct: 362 HMLVFA 367



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 401 LTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           ++F N  QY    ++ G   SA +T +G L+ +G+   G+LG      +  P+++     
Sbjct: 135 ISFFN-TQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKP 193

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           +    +SCG  H+  +   G+ +Y FG+ E GKLGL +  LK
Sbjct: 194 ISW--ISCGYYHSAFVTQDGE-LYTFGEPENGKLGLPSDKLK 232



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK- 67
           + A K+  +V  S G  H L  +  G++++ G NS+ QLGLG+       Q +   + + 
Sbjct: 83  VKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQY 142

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 143 KIKQLSAGSNTSAALT 158



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+    KN     IS G EH + V+  G+++ +G+N+  QLGL       +P  V 
Sbjct: 25  AENIPSKFWLKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVK 84

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL ++ +   S GR+H+  +T
Sbjct: 85  ALKSEKVVFASCGRNHTLLYT 105



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 4   TSGRHIPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           TS + I  F   + I  +S G+    A++  G++F WG+NS+ QLGL  +  Y  PQ + 
Sbjct: 130 TSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKID 189

Query: 63  ALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
               K I  +S G  HSA  T      +T G   +   +LGLP D
Sbjct: 190 I--GKPISWISCGYYHSAFVTQDG-ELYTFGEPENG--KLGLPSD 229


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT+NG LYTFG  D+G+LGHG T ++  P  V  L    V  V+CG NHT
Sbjct: 40  LSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +   + G  +Y+FG G  G+LG G+      P+
Sbjct: 100 IAATESGH-LYSFGCGGDGQLGHGDAEDSHVPK 131



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 2/91 (2%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGLNHT 473
           ACG + +AVVT NG +YTFG G+ G+LG G++ M  + PER+    KV   +VSCG + T
Sbjct: 246 ACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFT 305

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
             I   G  +Y FGDG +GKLGLG+     T
Sbjct: 306 AVITKHGN-LYTFGDGRHGKLGLGDECFSNT 335



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+   T +G+LY+FG G  G+LGHG   +  VP+ +  L+    + ++CG + +
Sbjct: 92  VACGRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFS 151

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
             I + G+ +Y +G    G+ GLG     PT
Sbjct: 152 AAITENGE-LYTWGSCGEGQNGLGEDTEIPT 181



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 12/140 (8%)

Query: 347 NDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWT---GRITPIVTGGQSVPLTF 403
           ++T   Q +++I D  +     A F  ++      G+ +T   G    +  G   +   F
Sbjct: 227 DNTSQLQKIKSIEDQVVVAACGAEFTAVVTKN---GSVYTFGQGNQGQLGLGSSMMETEF 283

Query: 404 ANRLQYYEA----AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVA 457
             R+  +E      ++CG   +AV+T +G LYTFG+G +G+LG G     N   PE+V  
Sbjct: 284 PERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKR 343

Query: 458 LNKVHVESVSCGLNHTVCIA 477
            N   V+ V+CG  H +  A
Sbjct: 344 FNNFTVKMVTCGGCHMLVAA 363



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 40/67 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V++S G EH   V+  G+++ +G N   QLG GN  +Y +P +V  L  + +  V+ GR
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGR 96

Query: 77  SHSAAWT 83
           +H+ A T
Sbjct: 97  NHTIAAT 103



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 2/99 (2%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G  H +A + +G ++++G   D QLG G+  +   P+++  L  +  + ++ G   S
Sbjct: 92  VACGRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFS 151

Query: 80  AAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNK 118
           AA T      +T G        LG   +IP    HL  K
Sbjct: 152 AAITENG-ELYTWGSCGEGQNGLGEDTEIPTRL-HLHGK 188


>gi|301120776|ref|XP_002908115.1| HECT E3 ubiquitin ligase, putative [Phytophthora infestans T30-4]
 gi|262103146|gb|EEY61198.1| HECT E3 ubiquitin ligase, putative [Phytophthora infestans T30-4]
          Length = 4610

 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 26/226 (11%)

Query: 212  KPIFAQISRQVVKMKGSDLRLP---------SRAWKVKLLGEGADDAGGVFDDTITEMCG 262
            + +F Q+ R++     S  R            RA+KVK LGEG +D GG +     ++  
Sbjct: 4208 RSVFGQLYREMRAWSDSFFRRAYCGKGHGGQRRAFKVKFLGEGVNDYGGPYRAVFEQIVD 4267

Query: 263  ELL----------SGAVPLLVRTPNGVADTGYNRDRYILNPDLSESL-----QSLMHFKF 307
            EL            G +PLL+  PN  + TG N+D+++LNP    +L      +L   +F
Sbjct: 4268 ELQMDNVELAKGEQGLLPLLIPCPNRRSATGINQDKFLLNPSCGTALLANGPMALDLHRF 4327

Query: 308  LGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVT 367
            LG L G A+R    + L L  LVW+ +    V+   LE  D   A SL  + ++      
Sbjct: 4328 LGKLIGTAVRHGLQMGLDLPSLVWRPLSGLEVSRAHLESVDVAVANSLTRVEELRTETTE 4387

Query: 368  EA--NFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYE 411
             A     E++           G   P+V  G+ + +T ANR  Y +
Sbjct: 4388 TAAQEAEEVLGYLTLSTTLSDGVEVPLVPQGEKMAVTLANRELYVQ 4433


>gi|356539897|ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           Y   IACG +HSAV+T  G + TFG G YG+ G G+T +   P  V +L  + +E V+ G
Sbjct: 304 YIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIRIEGVAAG 363

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           L HTVC +  G  VYAFG  ++G+LG G    +  P+
Sbjct: 364 LWHTVCTSADGD-VYAFGGNQFGQLGTGGDQAETIPR 399



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE--RVVALNKVHVESVSCGL 470
            +A G  H+   +++G +Y FG   +G+LG G      +P      +L  V+V+ +SCG 
Sbjct: 359 GVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGA 418

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I D GK V+ +G  +YG+LGLG+
Sbjct: 419 RHTALITDNGK-VFCWGWNKYGQLGLGD 445



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A++T NG ++ +G   YG+LG G  ++  +P  V  +     ++V+CG  HT
Sbjct: 414 ISCGARHTALITDNGKVFCWGWNKYGQLGLGDVIDRNIPSEVT-IEGCVAKNVACGWWHT 472

Query: 474 VCIAD 478
           + +A+
Sbjct: 473 LLLAE 477



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            P+ +N+++  IS G  H   +++ G+VF WG N   QLGLG+ I+   P  V  +    
Sbjct: 403 CPSLENVNVKRISCGARHTALITDNGKVFCWGWNKYGQLGLGDVIDRNIPSEV-TIEGCV 461

Query: 69  IRQVSAGRSHSAAWTAPP 86
            + V+ G  H+     PP
Sbjct: 462 AKNVACGWWHTLLLAEPP 479



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSNKNI-RQ 71
            + I  ++ G  H LA+S+ GQV+ WG   + QLGLG++I     P LV  +++ +  + 
Sbjct: 222 GVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKD 281

Query: 72  VSA 74
           +SA
Sbjct: 282 ISA 284



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL--ALSN 66
           + +   I I  ++ G  H +  S  G V+A+G N   QLG G       P+L+   +L N
Sbjct: 349 VSSLLGIRIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLEN 408

Query: 67  KNIRQVSAGRSHSA 80
            N++++S G  H+A
Sbjct: 409 VNVKRISCGARHTA 422


>gi|449669538|ref|XP_002162749.2| PREDICTED: uncharacterized protein LOC100214952 [Hydra
           magnipapillata]
          Length = 1164

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 14/150 (9%)

Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGEL------LSGAVPLLVRTPNGVADTGYNRDRYI 290
           W+VK +GEG  D GG F D++ E+  EL      +   +P  ++TPN  + +G + D + 
Sbjct: 836 WEVKFIGEGIIDQGGGFRDSLVEISEELCPPSPEVISPLPYFIKTPNQRSGSGNHLDCFT 895

Query: 291 LNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTL 350
           LNP    S      F ++G L G   RT + LPL L+P VWK++V E VT+   +D  T+
Sbjct: 896 LNP----SCDDFSLFYWIGQLMGACFRTGESLPLALAPYVWKILVGEHVTWE--KDYATV 949

Query: 351 YAQSLRAIRDIHLSGVTEANFPEIIPLECF 380
              ++R I    L  + E  + E+   E F
Sbjct: 950 DEAAVRNIG--WLESIDENTYSELKIEEVF 977


>gi|443698344|gb|ELT98382.1| hypothetical protein CAPTEDRAFT_123860, partial [Capitella teleta]
          Length = 409

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 6/92 (6%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGD-----YGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           ++ G  H AVVT    LYT+ N        G+LGHG T ++K P+RV AL+K+ V  VSC
Sbjct: 26  VSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYKAPKRVEALDKIAVNQVSC 85

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           G + TVC+ D G AVY+FG   YG LG G+ G
Sbjct: 86  GEDFTVCVTDDG-AVYSFGSDYYGCLGNGDQG 116



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +  F N  ++ +S G  HV+A++  G+V+ WG+    +LG+G + ++  PQ V       
Sbjct: 128 VSFFVNRPVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHG 187

Query: 69  IRQVSAG 75
           IR V AG
Sbjct: 188 IRSVHAG 194



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG  H   +T  G +YT+G+G++GRLG GT  +   P++V    +  + SV  G + +
Sbjct: 139 VSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHGIRSVHAGPDGS 198

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
             +   G+ + + G  E+ KLGL
Sbjct: 199 FILRTNGR-LQSCGSNEHNKLGL 220



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 4/99 (4%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESV 466
           +Y   A++ G  HSAV+   G+L TFG+  YG+LG G     K    V  +L   +V  V
Sbjct: 250 KYNIVAVSPGQTHSAVIDGFGHLITFGSNKYGQLGVGDFKERKTVTMVTGSLVGKNVTKV 309

Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGL--GNTGLKP 503
           +CG   TV IA     +Y+ G  E G+LG   G TG  P
Sbjct: 310 ACGDRSTV-IATSDNLIYSCGFSENGRLGFAAGETGKGP 347


>gi|242054967|ref|XP_002456629.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
 gi|241928604|gb|EES01749.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
          Length = 503

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 1/131 (0%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C E A ++      + G ++     +  L     AIACG +HSAVVT +G L TFG 
Sbjct: 293 PVPCIESALYSKDRPSAMKGNKAAEGHVSKVLGNCVRAIACGGRHSAVVTDSGALLTFGW 352

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G T +   P  V ++  + ++ V+ GL HTVC +  G  VY+FG  ++G+LG
Sbjct: 353 GLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAGLWHTVCTSVDGD-VYSFGGNQFGQLG 411

Query: 496 LGNTGLKPTPQ 506
            G+   +  P+
Sbjct: 412 TGSDQAETVPK 422



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 3/102 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-- 457
           P   ++ L      +A G  H+   + +G +Y+FG   +G+LG G+     VP+ V A  
Sbjct: 369 PTCVSSILGIKMQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDATS 428

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           L   +  SVSCG  H+  I D+G+ V+ +G  +YG+LGLG++
Sbjct: 429 LENKNARSVSCGARHSAIITDEGE-VFCWGWNKYGQLGLGDS 469



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 397 QSVP-LTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           ++VP L  A  L+   A +++CG +HSA++T  G ++ +G   YG+LG G +M+  VP  
Sbjct: 418 ETVPKLVDATSLENKNARSVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCS 477

Query: 455 VVALNKVHVESVSCGLNHTVCIADK 479
            V ++  H  +VSCG  HT+ +A+ 
Sbjct: 478 -VPVDAYHPLNVSCGWWHTLVLAES 501



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   I + D++ G  H +  S  G V+++G N   QLG G+      P+LV A  L N
Sbjct: 372 VSSILGIKMQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDATSLEN 431

Query: 67  KNIRQVSAGRSHSA 80
           KN R VS G  HSA
Sbjct: 432 KNARSVSCGARHSA 445



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 2/42 (4%)

Query: 14  NIHIVDISVGTEHVLAVSNT--GQVFAWGNNSDAQLGLGNQI 53
            + IV ++ G  H LA+S +  GQV+ WG   + QLGLG++I
Sbjct: 244 GVKIVSVAAGGRHTLALSASDLGQVWGWGYGGEGQLGLGSRI 285


>gi|356569137|ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Glycine max]
          Length = 472

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           Y   IACG +HSAV+T  G + TFG G YG+ G G+T +   P  V +L  + +E V+ G
Sbjct: 296 YIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPSCVSSLLGIQIEGVAAG 355

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           L HTVC +  G  VYAFG  ++G+LG G    +  P+
Sbjct: 356 LWHTVCTSVDGD-VYAFGGNQFGQLGTGGDQAETIPR 391



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE--RVVA 457
           P   ++ L      +A G  H+   + +G +Y FG   +G+LG G      +P      +
Sbjct: 338 PSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPS 397

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           L  V+V+ +SCG  HT  IAD GK V+ +G  +YG+LGLG+
Sbjct: 398 LENVNVKRISCGARHTALIADNGK-VFCWGWNKYGQLGLGD 437



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A++  NG ++ +G   YG+LG G  ++  +P  V  +     ++V+CG  HT
Sbjct: 406 ISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEVT-IEGCVAKNVACGWWHT 464

Query: 474 VCIADK 479
           + +A+ 
Sbjct: 465 LLLAES 470



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            P+ +N+++  IS G  H   +++ G+VF WG N   QLGLG+ I+   P  V  +    
Sbjct: 395 CPSLENVNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEV-TIEGCV 453

Query: 69  IRQVSAGRSHS 79
            + V+ G  H+
Sbjct: 454 AKNVACGWWHT 464



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 5/65 (7%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSN----KN 68
            + I  ++ G  H LA+S+ GQV+ WG   + QLGLG++I     P LV  +++    K+
Sbjct: 218 GVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKD 277

Query: 69  IRQVS 73
           + +VS
Sbjct: 278 MARVS 282



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL--ALSN 66
           + +   I I  ++ G  H +  S  G V+A+G N   QLG G       P+L+   +L N
Sbjct: 341 VSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLEN 400

Query: 67  KNIRQVSAGRSHSA 80
            N++++S G  H+A
Sbjct: 401 VNVKRISCGARHTA 414



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 25/118 (21%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNK---------- 460
           A++A G +H+  ++  G ++ +G G  G+LG G+ +     P  V  +N           
Sbjct: 222 ASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDMARV 281

Query: 461 -------------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                         +++ ++CG  H+  I D G AV  FG G YG+ G G+T  + +P
Sbjct: 282 SISSDGQNFRVPGSYIKGIACGGRHSAVITDAG-AVLTFGWGLYGQCGQGSTDDELSP 338


>gi|123479529|ref|XP_001322922.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121905777|gb|EAY10699.1| hypothetical protein TVAG_364230 [Trichomonas vaginalis G3]
          Length = 1612

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 22/252 (8%)

Query: 167  LRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTV-----RRLTTKSKQTVK-PIFAQISR 220
            + P+F  R + L +VR+         N  P +++     R+L   +++ ++  I  QI R
Sbjct: 1216 ITPIFKLRSF-LDIVRANND------NSVPQISINRDMARKLREGTEKDIRCSIIYQIFR 1268

Query: 221  QVV--KMK-GSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPN 277
             V   K+K GSD     + WKV    E   D GG+  + +TE+  +L +    ++  TPN
Sbjct: 1269 SVTIDKLKNGSD-----QPWKVSFTNERGIDMGGLARELVTELSLDLRNPNCGIVCPTPN 1323

Query: 278  GVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQE 337
             ++  GY RD++I  P  +    +   +  +G L  + IRT        +P+VW+ +V  
Sbjct: 1324 SISQVGYYRDKFIFVPTNNSLRDNDKLYMMVGALLLLVIRTGLVQEFDFAPVVWRFLVSN 1383

Query: 338  PVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQ 397
             +T  D+ + D  Y  ++ +I++   SG++E  F +   L  F      G+   +   G+
Sbjct: 1384 KITIEDIYEIDVNYKNTMESIKESINSGMSEEEFSKQFNLN-FVVKDSLGQENSLNQLGR 1442

Query: 398  SVPLTFANRLQY 409
            S  +T AN  ++
Sbjct: 1443 SSKVTLANANEF 1454


>gi|356569139|ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Glycine max]
          Length = 459

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           Y   IACG +HSAV+T  G + TFG G YG+ G G+T +   P  V +L  + +E V+ G
Sbjct: 283 YIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPSCVSSLLGIQIEGVAAG 342

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           L HTVC +  G  VYAFG  ++G+LG G    +  P+
Sbjct: 343 LWHTVCTSVDGD-VYAFGGNQFGQLGTGGDQAETIPR 378



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE--RVVA 457
           P   ++ L      +A G  H+   + +G +Y FG   +G+LG G      +P      +
Sbjct: 325 PSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPS 384

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           L  V+V+ +SCG  HT  IAD GK V+ +G  +YG+LGLG+
Sbjct: 385 LENVNVKRISCGARHTALIADNGK-VFCWGWNKYGQLGLGD 424



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A++  NG ++ +G   YG+LG G  ++  +P  V  +     ++V+CG  HT
Sbjct: 393 ISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEVT-IEGCVAKNVACGWWHT 451

Query: 474 VCIADK 479
           + +A+ 
Sbjct: 452 LLLAES 457



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            P+ +N+++  IS G  H   +++ G+VF WG N   QLGLG+ I+   P  V  +    
Sbjct: 382 CPSLENVNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEV-TIEGCV 440

Query: 69  IRQVSAGRSHS 79
            + V+ G  H+
Sbjct: 441 AKNVACGWWHT 451



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 5/65 (7%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSN----KN 68
            + I  ++ G  H LA+S+ GQV+ WG   + QLGLG++I     P LV  +++    K+
Sbjct: 205 GVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKD 264

Query: 69  IRQVS 73
           + +VS
Sbjct: 265 MARVS 269



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL--ALSN 66
           + +   I I  ++ G  H +  S  G V+A+G N   QLG G       P+L+   +L N
Sbjct: 328 VSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLEN 387

Query: 67  KNIRQVSAGRSHSA 80
            N++++S G  H+A
Sbjct: 388 VNVKRISCGARHTA 401



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 25/118 (21%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNK---------- 460
           A++A G +H+  ++  G ++ +G G  G+LG G+ +     P  V  +N           
Sbjct: 209 ASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDMARV 268

Query: 461 -------------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                         +++ ++CG  H+  I D G AV  FG G YG+ G G+T  + +P
Sbjct: 269 SISSDGQNFRVPGSYIKGIACGGRHSAVITDAG-AVLTFGWGLYGQCGQGSTDDELSP 325


>gi|326533000|dbj|BAJ89345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 500

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 3/135 (2%)

Query: 372 PEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLY 431
           P  IP  C E AS++      + G ++        +     AIACG +HS VVT +G L 
Sbjct: 288 PHTIP--CIESASYSKDRPSAMKGNKNAEGQINKVMGSRVTAIACGGRHSVVVTDSGALL 345

Query: 432 TFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEY 491
            FG G YG+ G G T +   P  V A+  V ++ V+ GL HTV I+  G  VY+FG  ++
Sbjct: 346 AFGWGLYGQCGQGNTDDVLSPTCVSAILGVKMQDVAAGLWHTVSISADGD-VYSFGGNQF 404

Query: 492 GKLGLGNTGLKPTPQ 506
           G+LG+G+   +  P+
Sbjct: 405 GQLGIGSDQAETIPK 419



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           +A G  H+  ++++G +Y+FG   +G+LG G+     +P+ V A  L   +  SVSCG  
Sbjct: 380 VAAGLWHTVSISADGDVYSFGGNQFGQLGIGSDQAETIPKLVDAPSLENKNARSVSCGAR 439

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  I D+G+ V+ +G  +YG+LGLG++
Sbjct: 440 HSAIITDEGE-VFCWGWNKYGQLGLGDS 466



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +++CG +HSA++T  G ++ +G   YG+LG G +M+  VP  +V ++  H  +VSCG  H
Sbjct: 433 SVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP-CIVPVDGYHPLNVSCGWWH 491

Query: 473 TVCIADK 479
           T+ +A+ 
Sbjct: 492 TLVLAES 498



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + A   + + D++ G  H +++S  G V+++G N   QLG+G+      P+LV A  L N
Sbjct: 369 VSAILGVKMQDVAAGLWHTVSISADGDVYSFGGNQFGQLGIGSDQAETIPKLVDAPSLEN 428

Query: 67  KNIRQVSAGRSHSA 80
           KN R VS G  HSA
Sbjct: 429 KNARSVSCGARHSA 442



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 30/52 (57%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           P+ +N +   +S G  H   +++ G+VF WG N   QLGLG+ ++   P +V
Sbjct: 424 PSLENKNARSVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCIV 475



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
           + I  ++ G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 244 VKITAVAAGGRHTLALSDFGQVWGWGYGGEGQLGLGSRI 282


>gi|326511212|dbj|BAJ87620.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 511

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 3/135 (2%)

Query: 372 PEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLY 431
           P  IP  C E AS++      + G ++        +     AIACG +HS VVT +G L 
Sbjct: 299 PHTIP--CIESASYSKDRPSAMKGNKNAEGQINKVMGSRVTAIACGGRHSVVVTDSGALL 356

Query: 432 TFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEY 491
            FG G YG+ G G T +   P  V A+  V ++ V+ GL HTV I+  G  VY+FG  ++
Sbjct: 357 AFGWGLYGQCGQGNTDDVLSPTCVSAILGVKMQDVAAGLWHTVSISADGD-VYSFGGNQF 415

Query: 492 GKLGLGNTGLKPTPQ 506
           G+LG+G+   +  P+
Sbjct: 416 GQLGIGSDQAETIPK 430



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           +A G  H+  ++++G +Y+FG   +G+LG G+     +P+ V A  L   +  SVSCG  
Sbjct: 391 VAAGLWHTVSISADGDVYSFGGNQFGQLGIGSDQAETIPKLVDAPSLENKNARSVSCGAR 450

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  I D+G+ V+ +G  +YG+LGLG++
Sbjct: 451 HSAIITDEGE-VFCWGWNKYGQLGLGDS 477



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + A   + + D++ G  H +++S  G V+++G N   QLG+G+      P+LV A  L N
Sbjct: 380 VSAILGVKMQDVAAGLWHTVSISADGDVYSFGGNQFGQLGIGSDQAETIPKLVDAPSLEN 439

Query: 67  KNIRQVSAGRSHSA 80
           KN R VS G  HSA
Sbjct: 440 KNARSVSCGARHSA 453



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +++CG +HSA++T  G ++ +G   YG+LG G +M+  VP  +V ++  H  +VS G  H
Sbjct: 444 SVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP-CIVPVDGYHPLNVSGGWWH 502

Query: 473 TVCIADK 479
           T+ +A+ 
Sbjct: 503 TLVLAES 509



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 30/52 (57%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           P+ +N +   +S G  H   +++ G+VF WG N   QLGLG+ ++   P +V
Sbjct: 435 PSLENKNARSVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCIV 486



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
           + I  ++ G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 255 VKITAVAAGGRHTLALSDFGQVWGWGYGGEGQLGLGSRI 293


>gi|443710893|gb|ELU04919.1| hypothetical protein CAPTEDRAFT_168000 [Capitella teleta]
          Length = 842

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 27/199 (13%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R PSR    W+ K + EG  D GG F D+++++  EL          +PL +R+PN  
Sbjct: 498 DYRWPSRHDQWWECKFIAEGIVDQGGGFRDSLSDIAEELCPSDNSSNVPLPLFIRSPNQK 557

Query: 280 -ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEP 338
             D   NRD YI NP    S Q   H++++G L G  +R K+ L L L   VWK +  E 
Sbjct: 558 NMDANVNRDVYIPNP----SCQEFHHYEWIGKLMGACLRGKENLVLSLPSFVWKKLGGEH 613

Query: 339 VTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWT-----GRITPIV 393
           V +    D  T+    ++ I   ++  + E NF         E  +WT     G    + 
Sbjct: 614 VKWE--RDFVTVDEAEVKVIE--NMVSMDEDNFSAFFG----EERTWTTVLSDGTCVSLK 665

Query: 394 TGGQSVPLTFANRLQYYEA 412
             G    + +A+R +Y  A
Sbjct: 666 PNGTEENVAYADRQEYCSA 684


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+AV+T  G ++T+G G +GRLGHG     + P R+ AL  +    V+CG  +T
Sbjct: 276 VCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEALEGIPCVQVACGFAYT 335

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             +   G+ +Y +G GE G+LGLG+   + TP
Sbjct: 336 AAVTASGE-LYTWGAGENGRLGLGDVADRHTP 366



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACGF ++A VT++G LYT+G G+ GRLG G   +   P RV  L+   V+ V  G  H+
Sbjct: 328 VACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHS-KVKEVYAGSVHS 386

Query: 474 VCIADKGKAVYAFGDGEY 491
            C+  +   VYAFG  EY
Sbjct: 387 -CVLTREGTVYAFGKHEY 403



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 64/145 (44%), Gaps = 22/145 (15%)

Query: 7   RHIPAFKN-----IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE---- 57
           R IP F       +  + +  G  H +A++  GQV+AWG+N  AQLG+GN          
Sbjct: 416 RLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEG 475

Query: 58  ------PQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDH 111
                 PQLV +L   NI +V AG  HSAA T      +  G      L LG PQ  P  
Sbjct: 476 AYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDG-QLYVCGRNYQGQLGLGSPQGFP-- 532

Query: 112 YGHLQNKPLPLIRARLKLLNRFSDL 136
               QN+     +A   L++R   L
Sbjct: 533 ----QNERGHPFQADFCLIDRLQHL 553



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 405 NRLQYYE-AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +RLQ+ +   IACG +HS  V  NG +++FG G  G+LGH +T     P  V AL     
Sbjct: 548 DRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRR 607

Query: 464 E--SVSCGLNHTVCIA 477
           E   V+CG N T+ +A
Sbjct: 608 EIMHVACGNNCTLVLA 623



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 11/103 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER----------VVALNKVHV 463
           +  G+ HSA +T +G LY  G    G+LG G+   +   ER          +  L  + +
Sbjct: 496 VVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKI 555

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + ++CG  H+V +A+ G+ V++FG G+ G+LG  +T  +  P+
Sbjct: 556 KQIACGGEHSVAVAENGE-VWSFGAGQKGQLGHESTTREDFPR 597



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I A + I  V ++ G  +  AV+ +G+++ WG   + +LGLG+  +   P  V  L +
Sbjct: 315 RRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHS 374

Query: 67  KNIRQVSAGRSHSAAWT 83
           K +++V AG  HS   T
Sbjct: 375 K-VKEVYAGSVHSCVLT 390



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 4/104 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +     + +  +  G +H   +++ G++F WG     +LG GN+     P+ + AL    
Sbjct: 265 VQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEALEGIP 324

Query: 69  IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHY 112
             QV+ G +++AA TA     +T G   +  L LG   D+ D +
Sbjct: 325 CVQVACGFAYTAAVTASG-ELYTWGAGENGRLGLG---DVADRH 364


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 1/90 (1%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVC 475
           CG++HSAVV+ +G ++TFG   YG+LGHG   +  VP +V AL    + SV+ G  HT+ 
Sbjct: 229 CGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTM- 287

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            AD    +Y +G  ++G+LGLG++  +P+P
Sbjct: 288 AADSSGNLYGWGWNKFGQLGLGDSSDRPSP 317



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG +HS   T +G ++++G G YG LG G + +  +P RVV L  + + S  CG  H
Sbjct: 174 SVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRH 233

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +++ G+ V+ FG  +YG+LG G+   +  P
Sbjct: 234 SAVVSEDGR-VFTFGWSKYGQLGHGDHTDRTVP 265



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 51/86 (59%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A++CG  HS  + S G + ++G G+ G+LGHG       P+ +  L    +ESV CG  +
Sbjct: 17  AVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEY 76

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T+ +A     VY++G G++G+LG G+
Sbjct: 77  TIAVAPSRGQVYSWGWGDFGRLGHGD 102



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+ VV   G L+TFG    G+LG G T +   P+ VVAL    V SV+CG  H+
Sbjct: 123 VACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHS 182

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +   + G  V+++G G YG LG G +
Sbjct: 183 LAATESGT-VFSWGWGRYGNLGDGES 207



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 2/95 (2%)

Query: 413 AIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++ CG +++ AV  S G +Y++G GD+GRLGHG   +  VP  +   +   V  V+CG  
Sbjct: 69  SVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDT 128

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT+ +A +G+ ++ FG  + G+LGLG+T    +PQ
Sbjct: 129 HTLVVAGEGE-LFTFGRNQNGQLGLGHTNDCLSPQ 162



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I  F    +  ++ G  H L V+  G++F +G N + QLGLG+  +   PQLV+AL  
Sbjct: 110 RPIEFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQG 169

Query: 67  KNIRQVSAGRSHSAAWT 83
           + +R V+ G  HS A T
Sbjct: 170 ERVRSVACGSEHSLAAT 186



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 2/102 (1%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV- 455
           ++VP   A       +++A G++H+    S+G LY +G   +G+LG G + +   P  V 
Sbjct: 262 RTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVG 321

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            AL    V  V+CG  HTV + + G+ VY++G G  G+LG G
Sbjct: 322 GALAGQRVSLVTCGWRHTVAVTEGGR-VYSWGRGVNGQLGHG 362



 Score = 45.1 bits (105), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSN 66
            + A ++  I  ++ G  H +A  ++G ++ WG N   QLGLG+  +   P LV  AL+ 
Sbjct: 267 QVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAG 326

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI 108
           + +  V+ G  H+ A T      ++ G   +  L  G  QD+
Sbjct: 327 QRVSLVTCGWRHTVAVTEGG-RVYSWGRGVNGQLGHGAEQDL 367



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 4/74 (5%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A +   +  ++ G+EH LA + +G VF+WG      LG G   +   P  V+ L  + 
Sbjct: 164 VVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGL--EG 221

Query: 69  IRQVSA--GRSHSA 80
           IR VSA  G  HSA
Sbjct: 222 IRMVSAECGWRHSA 235



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 7   RHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           R++P      + I +V    G  H   VS  G+VF +G +   QLG G+  +   P  V 
Sbjct: 210 RYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVA 269

Query: 63  ALSNKNIRQVSAGRSHSAA 81
           AL +  I  V+ G  H+ A
Sbjct: 270 ALRHTRISSVAGGWRHTMA 288



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 32/65 (49%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          +  +S G+ H +A+ + G V +WG   D QLG G       P+ +  L++  I  V  G 
Sbjct: 15 VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGA 74

Query: 77 SHSAA 81
           ++ A
Sbjct: 75 EYTIA 79


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A++T NG L+ FG+ ++G+LG G+ +    P  V AL    V+ V+CG NHT
Sbjct: 41  IACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHT 100

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           +    KGK VYA G    G+LGLG+
Sbjct: 101 LICTAKGK-VYASGGNSEGQLGLGD 124



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V  + G +YTFG G +G+LGHGT     +VP  V    K     V CG NH
Sbjct: 249 VACGGGHT-VALAEGNVYTFGLGQFGQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENH 307

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTG----LKPT 504
           T  I + G  +Y FGDG +GKLGLG        KPT
Sbjct: 308 TAVITEDG-LLYTFGDGRHGKLGLGEENFTNQFKPT 342



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           ++CG+ HSA+VT +G LYTFG  D G+LG GT      +VP+ V ++ K  V  V+CG  
Sbjct: 196 VSCGYYHSALVTVDGALYTFGERDSGKLGLGTHQLPGHRVPQLVKSI-KEPVRQVACGGG 254

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV +A+    VY FG G++G+LG G
Sbjct: 255 HTVALAEGN--VYTFGLGQFGQLGHG 278



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 45/73 (61%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            KN   + I+ G EH   ++  G++F +G+N+  QLGLG+++   +P  V AL ++ ++ 
Sbjct: 33  LKNDIPLRIACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQL 92

Query: 72  VSAGRSHSAAWTA 84
           V+ GR+H+   TA
Sbjct: 93  VACGRNHTLICTA 105



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           + CG  H+AV+T +G LYTFG+G +G+LG G     N   P   +   K +V+   CG  
Sbjct: 301 VVCGENHTAVITEDGLLYTFGDGRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCGGC 360

Query: 472 HTVCIA 477
           H V +A
Sbjct: 361 HMVVLA 366



 Score = 41.6 bits (96), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 11  AFKNIHIVD-------ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           +FK +   D       ++ G+    A++ +G++F WG+N++ Q+GLG +     PQ V  
Sbjct: 130 SFKRLDFFDSQGPIKMLAAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQVSSPQEVSV 189

Query: 64  LSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDH 111
              + I  VS G  HSA  T      +T G   S  L LG  Q +P H
Sbjct: 190 --GQPISWVSCGYYHSALVTVDGA-LYTFGERDSGKLGLGTHQ-LPGH 233


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1054

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 9/102 (8%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA++TS G LYTFG+G +G LGHG   +   P+ V ALN      V+CG+ H
Sbjct: 367 SVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKVACGVWH 426

Query: 473 TVCIADK---------GKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  I +           K +Y +GDG+  +LG G+   +  P
Sbjct: 427 SAAIVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIP 468



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 40/64 (62%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H AV+TS   +YT+G G  GRLGHG   + K P  V AL   HV+S+SCG N T
Sbjct: 534 ISCGAAHVAVLTSRSEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDRHVKSISCGSNFT 593

Query: 474 VCIA 477
            CI 
Sbjct: 594 TCIC 597



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG +H A+ T  G ++T+G    GRLGHGT  +   P+ V +L+   V+ +SCG  HT
Sbjct: 261 IVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESLSVTIVDFISCGEFHT 320

Query: 474 VCIADKGKAVYAFGDGEY 491
             I+  G  ++ +GDG Y
Sbjct: 321 CAISASGD-LFNWGDGSY 337



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  HSA +            +  LYT+G+GD  RLG G      +P  + AL + + 
Sbjct: 420 VACGVWHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNF 479

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             + CG N TV +A  G  VY  G  + G+LG
Sbjct: 480 HQLGCGQNMTVALATSGH-VYTMGSSDNGQLG 510



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-A 457
           +P      L++    + CG   +  + ++G++YT G+ D G+LG+  + + K P  V   
Sbjct: 467 IPTCLQALLEHNFHQLGCGQNMTVALATSGHVYTMGSSDNGQLGNPKS-DGKHPCLVKDK 525

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L    VE +SCG  H   +  + + VY +G G  G+LG G+   K TP
Sbjct: 526 LANELVEEISCGAAHVAVLTSRSE-VYTWGLGANGRLGHGDLNDKKTP 572



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 37/59 (62%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  + + P +V AL +++++ +S G
Sbjct: 531 VEEISCGAAHVAVLTSRSEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDRHVKSISCG 589



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 35/70 (50%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I  G+ HV   +  G+VF WG     +LG G   +   P+LV +LS   +  +S 
Sbjct: 256 LDVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESLSVTIVDFISC 315

Query: 75  GRSHSAAWTA 84
           G  H+ A +A
Sbjct: 316 GEFHTCAISA 325


>gi|195567859|ref|XP_002107476.1| GD17489 [Drosophila simulans]
 gi|194204883|gb|EDX18459.1| GD17489 [Drosophila simulans]
          Length = 1505

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T  ++VP   A   Q+   ++ CG  +SA +T  G L T+G G Y RLGHG + +  +P 
Sbjct: 240 THARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPT 299

Query: 454 RVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            VVAL+   V  V+ G    H++ +  +G  V+A+GDG+YGKLG GN 
Sbjct: 300 LVVALSDHMVVDVALGSGDAHSLALTSEG-LVFAWGDGDYGKLGNGNC 346



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)

Query: 431 YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490
           Y++G G+  RLGHG T    VP ++ AL +  V+SV CG +++  I   G  +  +G G 
Sbjct: 225 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGN-LLTWGRGT 283

Query: 491 YGKLGLGNTGLKPTP 505
           Y +LG GN+  +  P
Sbjct: 284 YARLGHGNSDDRSLP 298



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G  HS  +TS G ++ +G+GDYG+LG+G       P  V +L +  V+ V  G 
Sbjct: 311 DVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRVFAGS 368

Query: 471 NHTVCIADKGKAVYAFG 487
             +V ++ +G+ +Y +G
Sbjct: 369 QFSVALSSEGQ-LYTWG 384



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 27/41 (65%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
           R + + ++  IVD++V   H LA+S++G+VF WG N   Q+
Sbjct: 405 RLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 445



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A +   +  +  G  +  A++  G +  WG  + A+LG GN  +   P LV+ALS+  
Sbjct: 249 IAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHM 308

Query: 69  IRQVS--AGRSHSAAWTAPPL 87
           +  V+  +G +HS A T+  L
Sbjct: 309 VVDVALGSGDAHSLALTSEGL 329



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A  +  +VD+++G+   H LA+++ G VFAWG+    +LG GN     +P LV +L  
Sbjct: 301 VVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL-- 358

Query: 67  KNIRQVSAGRSHSAAWTA 84
             +++V AG   S A ++
Sbjct: 359 PRVQRVFAGSQFSVALSS 376


>gi|123476548|ref|XP_001321446.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121904272|gb|EAY09223.1| hypothetical protein TVAG_309120 [Trichomonas vaginalis G3]
          Length = 2490

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 9/172 (5%)

Query: 196  PSVTVRR------LTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDA 249
            PS+T+ R      +T  +      I +Q++R +  ++   L    + WKV  +GE A DA
Sbjct: 2115 PSITIDRHAAHRLITNGNGDPYYSIISQLTRVIRNIEHFKLCCKKKPWKVTFVGEMAVDA 2174

Query: 250  GGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLG 309
            GG   + +TE    +      L + TPN    TG  +D YI      +++  L  +  +G
Sbjct: 2175 GGPGRELLTEAAASIFEPTTLLAISTPNMRNHTGQYKDVYI---PFDKTMSRLQDYYTIG 2231

Query: 310  ILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDI 361
            +L G+ IRT     LP +P+VWK I  E V   D+   D+   +    IR +
Sbjct: 2232 VLLGIIIRTGLQQDLPFAPIVWKFIANEHVGIDDVTAIDSGLLEHFNHIRSV 2283


>gi|224112699|ref|XP_002316264.1| predicted protein [Populus trichocarpa]
 gi|222865304|gb|EEF02435.1| predicted protein [Populus trichocarpa]
          Length = 164

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 1/123 (0%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C + A    R   +  GG +           +   IACG +HSAV+T  G L TFG 
Sbjct: 39  PIPCIDSAYGKDRAVVLSRGGMTSEGQSFRVPGSHVKGIACGGRHSAVITDAGALLTFGW 98

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G+T +   P  V +L  + +E+V+ GL HTVC++  G  VY+FG  ++G+LG
Sbjct: 99  GLYGQCGQGSTDDELSPTCVSSLLGIRIEAVAAGLWHTVCVSADGD-VYSFGGNQFGQLG 157

Query: 496 LGN 498
            G 
Sbjct: 158 TGG 160


>gi|168002036|ref|XP_001753720.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695127|gb|EDQ81472.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 478

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 12/137 (8%)

Query: 381 EGASWTGRITPIVTGGQSVPL--TFANRLQYYEAAI--------ACGFKHSAVVTSNGYL 430
           EG    G  T IV+  Q VP   +  N +   EA+I        ACG +HSAV+T  G L
Sbjct: 262 EGQLGLGSRTRIVSTPQRVPCFSSLENGVTIGEASIPGSCVTRIACGGRHSAVITDAGAL 321

Query: 431 YTFGNGDYG-RLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
            TFG G YG ++G G+T +   P  V A+  + V  ++ GL HT+CI D G  VYAFG  
Sbjct: 322 LTFGWGLYGQQVGQGSTEDELSPCLVSAMRGLRVVGIAAGLWHTLCITDIGD-VYAFGGN 380

Query: 490 EYGKLGLGNTGLKPTPQ 506
           ++G+LG+G    + +P+
Sbjct: 381 QFGQLGVGGNTAETSPR 397



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGL 470
            IA G  H+  +T  G +Y FG   +G+LG G       P  V A  L      +V+CG 
Sbjct: 357 GIAAGLWHTLCITDIGDVYAFGGNQFGQLGVGGNTAETSPRLVDAPLLEDETSVAVACGA 416

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            H+V +   GK ++A+G  +YG+LGLG++  +  P
Sbjct: 417 RHSVVLTGSGK-IFAWGWNKYGQLGLGDSNNRDLP 450



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A+ACG +HS V+T +G ++ +G   YG+LG G + N  +P +V   +     S++CG  H
Sbjct: 411 AVACGARHSVVLTGSGKIFAWGWNKYGQLGLGDSNNRDLPVQVTMNDGGRAASIACGWWH 470

Query: 473 TV 474
           T+
Sbjct: 471 TL 472



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + A + + +V I+ G  H L +++ G V+A+G N   QLG+G       P+LV A  L +
Sbjct: 347 VSAMRGLRVVGIAAGLWHTLCITDIGDVYAFGGNQFGQLGVGGNTAETSPRLVDAPLLED 406

Query: 67  KNIRQVSAGRSHSAAWTA 84
           +    V+ G  HS   T 
Sbjct: 407 ETSVAVACGARHSVVLTG 424



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 35/72 (48%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           P  ++   V ++ G  H + ++ +G++FAWG N   QLGLG+  N   P  V        
Sbjct: 402 PLLEDETSVAVACGARHSVVLTGSGKIFAWGWNKYGQLGLGDSNNRDLPVQVTMNDGGRA 461

Query: 70  RQVSAGRSHSAA 81
             ++ G  H+ A
Sbjct: 462 ASIACGWWHTLA 473


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T +G ++TFG G +G+LGH +T N   P  V  L  + V  V+CG  HT
Sbjct: 157 LACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHT 216

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT 499
           +  ++D GK V++FG G+ G+LG G T
Sbjct: 217 LAYVSDLGK-VFSFGSGKEGQLGNGGT 242



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  ++ +G +Y++G  D G+LG G T   + P  V AL+   VE ++CG +HT
Sbjct: 105 ISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHT 164

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + + G+ V+ FG G++G+LG  +T  +  P+
Sbjct: 165 ALLTEDGQ-VFTFGAGKHGQLGHNSTQNELRPR 196



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G    +   PQLV  LS   + Q+SAG
Sbjct: 49  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108

Query: 76  RSHSAA 81
           ++HS A
Sbjct: 109 KAHSMA 114



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 40/67 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V IS G  H +A+S +G +++WG N   QLGLG+      P LV AL ++ +  ++ G 
Sbjct: 102 LVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGG 161

Query: 77  SHSAAWT 83
           SH+A  T
Sbjct: 162 SHTALLT 168



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L+ V +  +S G  H
Sbjct: 52  ITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAH 111

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  +Y++G  + G+LGLG+T  +  P
Sbjct: 112 SMALSMSGN-IYSWGRNDLGQLGLGHTDGEEFP 143



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 4   TSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQ 59
           T G   P    A  +  +  ++ G  H   ++  GQVF +G     QLG  +  N   P+
Sbjct: 137 TDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPR 196

Query: 60  LVLALSNKNIRQVSAGRSHSAAWTA 84
           LV  L+   + QV+ GR H+ A+ +
Sbjct: 197 LVTELTGIRVTQVACGRRHTLAYVS 221


>gi|195482065|ref|XP_002101895.1| GE17875 [Drosophila yakuba]
 gi|194189419|gb|EDX03003.1| GE17875 [Drosophila yakuba]
          Length = 1023

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T  ++VP   A   Q+   ++ CG  +SA +T  G L T+G G Y RLGHG + +  +P 
Sbjct: 653 THARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPT 712

Query: 454 RVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            VVAL+   V  V+ G    H++ +  +G  V+A+GDG+YGKLG GN 
Sbjct: 713 LVVALSDHMVVDVALGSGDAHSLALTSEG-LVFAWGDGDYGKLGNGNC 759



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVC 475
           C  +H   + SN   Y++G G+  RLGHG T    VP ++ AL +  V+SV CG +++  
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 682

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           I   G  +  +G G Y +LG GN+  +  P
Sbjct: 683 ITCGGN-LLTWGRGTYARLGHGNSDDRSLP 711



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 27/41 (65%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
           R + + ++  IVD++V   H LA+S++G+VF WG N   Q+
Sbjct: 818 RLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G  HS  +TS G ++ +G+GDYG+LG+G       P  V  L +  V+ V  G 
Sbjct: 724 DVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVETLPR--VQRVFAGS 781

Query: 471 NHTVCIADKGKAVYAFGDG 489
             +V ++ +G+ +Y +G  
Sbjct: 782 QFSVALSSEGQ-LYTWGKA 799



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A +   +  +  G  +  A++  G +  WG  + A+LG GN  +   P LV+ALS+  
Sbjct: 662 IAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHM 721

Query: 69  IRQVS--AGRSHSAAWTAPPL 87
           +  V+  +G +HS A T+  L
Sbjct: 722 VVDVALGSGDAHSLALTSEGL 742



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 9   IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + A  +  +VD+++G+   H LA+++ G VFAWG+    +LG GN     +P LV  L  
Sbjct: 714 VVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVETL-- 771

Query: 67  KNIRQVSAGRSHSAAWTA 84
             +++V AG   S A ++
Sbjct: 772 PRVQRVFAGSQFSVALSS 789


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 7/96 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+  +T N  +Y+FG G +G+LGHGT     ++P  V    K  V+  +CG NH
Sbjct: 249 VACGGGHTVALTEN-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENH 307

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTG----LKPT 504
           T  I D G  +Y FGDG +GKLGLG        KPT
Sbjct: 308 TALITDNG-LLYTFGDGRHGKLGLGEENFTNQFKPT 342



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           ++CG+ HSA VT +G LYTFG  D G+LG  T    N KVP++V  +    V+ V+CG  
Sbjct: 196 VSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGG 254

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +    VY+FG G++G+LG G
Sbjct: 255 HTVALTE--NEVYSFGLGQFGQLGHG 278



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A+VT NG L+ FG+ ++G+LG GT      P  V AL    V+  +CG  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           +    +G  +YA G    G+LGLG+
Sbjct: 101 LVFTSRGN-LYACGGNNEGQLGLGD 124



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLNH 472
           ACG  H+A++T NG LYTFG+G +G+LG G     N   P         HV SV+CG  H
Sbjct: 302 ACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCH 361

Query: 473 TVCIA 477
            + +A
Sbjct: 362 MLVLA 366



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G   SA +T +G LY  G+   G++G G   N   P+ V    +V    VSCG  H+
Sbjct: 146 LAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKRVFW--VSCGYYHS 203

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGL 501
             +   G A+Y FG+ + GKLGL    L
Sbjct: 204 AFVTVDG-ALYTFGEKDSGKLGLSTEKL 230



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            KN   + IS G EH   V+  G++F +G+N+  QLGLG +    +P  V AL ++ ++ 
Sbjct: 33  LKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKL 92

Query: 72  VSAGRSHSAAWTA 84
            + GR+H+  +T+
Sbjct: 93  TACGRTHTLVFTS 105



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 2/94 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLNH 472
            ACG  H+ V TS G LY  G  + G+LG G   +      V   NK   ++ ++ G N 
Sbjct: 93  TACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNT 152

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  +   G+ +Y  GD   G++GLG      TPQ
Sbjct: 153 SAALTQDGR-LYMRGDNSEGQIGLGKESNALTPQ 185


>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
           [Pongo abelii]
          Length = 932

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G YG+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 129 ISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 188

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 189 LAFVPSSGLIYAFGCGARGQLGTGHT 214



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
          R I       I+ +S G  H LA+++ GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 11 RLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 70

Query: 66 NKNIRQVSAGRSHSAA 81
             + QV+AG +HS A
Sbjct: 71 GIPLAQVAAGGAHSFA 86



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 59  SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 118

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 119 KLLRTQKVVYISCGEEHTAVLT 140



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 75  AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G YG+LG
Sbjct: 135 HTAVLTKSG-GVFTFGAGSYGQLG 157



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 117 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGS 176

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 177 EVTQIACGRQHTLAF 191



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   + S+G  +T+G   +G+LG G    +   P+RV +L  + +  V+ G  H
Sbjct: 24  VSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 83

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 84  SFALSLSG-AVFGWGMNNAGQLGLSDEKDRESP 115



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 181 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 223


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 59/85 (69%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+AVVT +G++YT+G G  G+LGHG   +   P  V  L+ ++V +++CGL HT
Sbjct: 144 VACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHT 203

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           V +++  +AV+++G  EYG+LG G 
Sbjct: 204 VVVSEVDRAVFSWGWDEYGQLGHGG 228



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 5/91 (5%)

Query: 413 AIACGF----KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           ++ACG     +HSA VT  G +YT+G+G  G+LGHG + N  +P  +V L    +  V+C
Sbjct: 35  SVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVAC 94

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           G  HTV ++  G  V+A+G G +G+LG+G+T
Sbjct: 95  GSAHTVVVSKAG-LVFAWGWGHFGQLGVGST 124



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+ VV+  G ++ +G G +G+LG G+T N   P +V +L+ V V  V+CG  HT
Sbjct: 92  VACGSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHT 151

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + G  VY +G G  G+LG G+   +  P
Sbjct: 152 AVVTESGH-VYTWGWGVNGQLGHGDDASQSRP 182



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I   ++  IV+++ G+ H + VS  G VFAWG     QLG+G+  N  +P  V +L  
Sbjct: 79  RLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDG 138

Query: 67  KNIRQVSAGRSHSA 80
             + +V+ G +H+A
Sbjct: 139 VKVCKVACGSAHTA 152



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query: 9  IPAFKNIHIVDISVG----TEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
          I A + + +V ++ G     +H  AV+  GQV+ WG+    QLG G+  N   P+L++ L
Sbjct: 25 IIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGL 84

Query: 65 SNKNIRQVSAGRSHS 79
           +  I +V+ G +H+
Sbjct: 85 QSNPIVEVACGSAHT 99



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 16/72 (22%), Positives = 34/72 (47%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
            + +   + +  ++ G+ H   V+ +G V+ WG   + QLG G+  +   P  V  L   
Sbjct: 132 QVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGI 191

Query: 68  NIRQVSAGRSHS 79
            +  ++ G +H+
Sbjct: 192 YVSTLACGLAHT 203



 Score = 38.5 bits (88), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 5/73 (6%)

Query: 431 YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG----LNHTVCIADKGKAVYAF 486
           +++G  + G LG GTT     P  ++AL  + V SV+CG      H+  + ++G+ VY +
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQ-VYTW 59

Query: 487 GDGEYGKLGLGNT 499
           G G+ G+LG G++
Sbjct: 60  GSGKSGQLGHGDS 72


>gi|357460949|ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489804|gb|AES71007.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 464

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIACG +HSAV+T  G +  FG G YG+ G G+T +   P  V +L  + +E V+ GL H
Sbjct: 291 AIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLWH 350

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           TVC +  G  VYAFG  ++G+LG G+   +  P+
Sbjct: 351 TVCTSADGD-VYAFGGNQFGQLGTGSDQAETLPR 383



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 3/101 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE--RVVA 457
           P   ++ L      +A G  H+   +++G +Y FG   +G+LG G+     +P      +
Sbjct: 330 PTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPS 389

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           L  V+V+++SCG  HT  + D GK V+++G  +YG+LGLG+
Sbjct: 390 LENVNVKTISCGARHTALVTDNGK-VFSWGWNKYGQLGLGD 429



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A+VT NG ++++G   YG+LG G  ++  +P   VA+     ++V+CG  HT
Sbjct: 398 ISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSE-VAIEGCIAKNVACGWWHT 456

Query: 474 VCIADK 479
           + +A+ 
Sbjct: 457 LLLAES 462



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            P+ +N+++  IS G  H   V++ G+VF+WG N   QLGLG+ I+   P  V A+    
Sbjct: 387 CPSLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV-AIEGCI 445

Query: 69  IRQVSAGRSHS 79
            + V+ G  H+
Sbjct: 446 AKNVACGWWHT 456



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL--ALSN 66
           + +   I I  ++ G  H +  S  G V+A+G N   QLG G+      P+L+   +L N
Sbjct: 333 VSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLEN 392

Query: 67  KNIRQVSAGRSHSA 80
            N++ +S G  H+A
Sbjct: 393 VNVKTISCGARHTA 406



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSNKNIRQV 72
            + I  ++ G  H L +S+ GQV+ WG   + QLGLG+++     P ++  + + ++ Q 
Sbjct: 214 GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQG 273

Query: 73  S 73
           S
Sbjct: 274 S 274



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 35/120 (29%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM------------------------- 447
           ++A G +H+ V++  G ++ +G G  G+LG G+ +                         
Sbjct: 219 SVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQGSMSSE 278

Query: 448 --NWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             N+++P          +++++CG  H+  I D G AV AFG G YG+ G G+T  + +P
Sbjct: 279 GHNFRIPGSC-------IKAIACGGRHSAVITDAG-AVLAFGWGLYGQCGQGSTDDELSP 330


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 7/96 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+  +T N  +Y+FG G +G+LGHGT     ++P  V    K  V+  +CG NH
Sbjct: 249 VACGGGHTVALTEN-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENH 307

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTG----LKPT 504
           T  I D G  +Y FGDG +GKLGLG        KPT
Sbjct: 308 TALITDNG-LLYTFGDGRHGKLGLGEENFTNQFKPT 342



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           ++CG+ HSA VT +G LYTFG  D G+LG  T    N KVP++V  +    V+ V+CG  
Sbjct: 196 VSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGG 254

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +    VY+FG G++G+LG G
Sbjct: 255 HTVALTE--NEVYSFGLGQFGQLGHG 278



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A+VT NG L+ FG+ ++G+LG GT      P  V AL    V+  +CG  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           +    +G  +YA G    G+LGLG+
Sbjct: 101 LVFTSRGN-LYACGGNNEGQLGLGD 124



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLNH 472
           ACG  H+A++T NG LYTFG+G +G+LG G     N   P         HV SV+CG  H
Sbjct: 302 ACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCH 361

Query: 473 TVCIA 477
            + +A
Sbjct: 362 MLVLA 366



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G   SA +T +G LY +G+   G++G G   N   P+ V    +V    VSCG  H+
Sbjct: 146 LAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFW--VSCGYYHS 203

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGL 501
             +   G A+Y FG+ + GKLGL    L
Sbjct: 204 AFVTVDG-ALYTFGEKDSGKLGLSTEKL 230



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            KN   + IS G EH   V+  G++F +G+N+  QLGLG +    +P  V AL ++ ++ 
Sbjct: 33  LKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKL 92

Query: 72  VSAGRSHSAAWTA 84
            + GR+H+  +T+
Sbjct: 93  TACGRTHTLVFTS 105



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLNH 472
            ACG  H+ V TS G LY  G  + G+LG G   +      V   NK   ++ ++ G N 
Sbjct: 93  TACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNT 152

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  +   G+ +Y +GD   G++GLG      TPQ
Sbjct: 153 SAALTQDGR-LYMWGDNSEGQIGLGKESNALTPQ 185



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 8   HIPAFKNIH--IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           H+  F N    I  ++ G+    A++  G+++ WG+NS+ Q+GLG + N   PQ V    
Sbjct: 132 HLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV-- 189

Query: 66  NKNIRQVSAGRSHSA 80
            K +  VS G  HSA
Sbjct: 190 GKRVFWVSCGYYHSA 204



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K+  +   + G  H L  ++ G ++A G N++ QLGLG+  N R    ++   NK 
Sbjct: 82  VKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGD-CNDRTSFHLVEFFNKQ 140

Query: 69  --IRQVSAGRSHSAAWT 83
             I+ ++AG + SAA T
Sbjct: 141 GPIKMLAAGSNTSAALT 157


>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
           livia]
          Length = 719

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T    +YTFG G YG+LGHGT      VP+ V  L +  + +++CG NH
Sbjct: 243 VACGGEHTVVLTETD-VYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENH 301

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  +A+ G  ++ FGDG +GKLGLG
Sbjct: 302 TAVVAENG-LMFTFGDGRHGKLGLG 325



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A+VT NG LY FG+ ++G+LG G+      P  V AL     +   CG NHT
Sbjct: 35  ISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHT 94

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           +   +KG  VYA G    G+LGLG+T  + T
Sbjct: 95  LVYTEKGN-VYAAGGNSEGQLGLGDTEERST 124



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 41/72 (56%)

Query: 12 FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
          FKN   V IS G EH   V+  G+++ +G+N+  QLGLG++    +P  V AL  +  + 
Sbjct: 27 FKNDKPVLISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKL 86

Query: 72 VSAGRSHSAAWT 83
             GR+H+  +T
Sbjct: 87 AVCGRNHTLVYT 98



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           Q+    +A G   SA VT +G L+ +G+   G++G        VP +V     V   S+S
Sbjct: 134 QHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDVGKPV--SSIS 191

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
           CG  H+  I   G+ +Y FG+ E GKLGL
Sbjct: 192 CGYYHSALITGDGE-LYTFGEPENGKLGL 219



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERV 455
           SVP +  +  ++    I CG  H+AVV  NG ++TFG+G +G+LG G     N   P   
Sbjct: 279 SVPKSVKHLRRHKICNITCGENHTAVVAENGLMFTFGDGRHGKLGLGEENYTNQFDPTLC 338

Query: 456 VALNKVHVESVSCGLNHTVCIA 477
               +  V  V+CG  H +  A
Sbjct: 339 YNFLRFTVLLVACGGCHMLVFA 360



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F N H I  ++ G+    AV+  GQ+F WG+NS+ Q+GL ++     P  V     K
Sbjct: 128 ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDV--GK 185

Query: 68  NIRQVSAGRSHSAAWTA 84
            +  +S G  HSA  T 
Sbjct: 186 PVSSISCGYYHSALITG 202



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 22  VGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN-IRQVSAGRSHSA 80
            G  H L  +  G V+A G NS+ QLGLG+        L+   +N++ I+Q++AG   SA
Sbjct: 89  CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSA 148

Query: 81  AWT 83
           A T
Sbjct: 149 AVT 151


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 10/102 (9%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+AVV++ G L+T+G+G +G LGHG  ++   P+ V +LN + V+SV+CG  HT
Sbjct: 412 VACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACGSWHT 471

Query: 474 VCIAD------KGKA----VYAFGDGEYGKLGLGNTGLKPTP 505
             I D      K K+    ++ +GDG+ GKLG G+   K  P
Sbjct: 472 AAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLP 513



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +I+ G KH+A++T +G ++++G G  GRLGH   M+   P+ V +LN +  +SV+CG  +
Sbjct: 304 SISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVACG-EY 362

Query: 473 TVCIADKGKAVYAFGDGEYG 492
             C   K   VY +GD  +G
Sbjct: 363 QTCALTKAGEVYTWGDSRFG 382



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 52/96 (54%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+S  G++  + +   SV +      + +  AI+ G  H A +TS G +YT+G G +G+L
Sbjct: 547 GSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQL 606

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           G G + +  +P  V AL    VES++CG N T  I 
Sbjct: 607 GLGDSDDRNLPTFVEALGDKQVESIACGSNFTAAIC 642



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 41/70 (58%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            K   +  IS G+ HV ++++TG+V+ WG  +  QLGLG+  +   P  V AL +K +  
Sbjct: 571 LKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVES 630

Query: 72  VSAGRSHSAA 81
           ++ G + +AA
Sbjct: 631 IACGSNFTAA 640



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVV-----------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           ++ACG  H+A +           ++ G L+T+G+GD G+LGHG      +P  V  L   
Sbjct: 463 SVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDC 522

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               VSCG   TV + + G+ VY  G   +G+LG
Sbjct: 523 DFAQVSCGRMLTVGLTNMGR-VYTMGSSIHGQLG 555



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++CG   +  +T+ G +YT G+  +G+LG+ ++ +  V      L +  V+++S G  
Sbjct: 525 AQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSY 584

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H   +   G+ VY +G G +G+LGLG++  +  P
Sbjct: 585 HVASLTSTGR-VYTWGKGAHGQLGLGDSDDRNLP 617



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 36/69 (52%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  IS+G +H   ++  G++F+WG     +LG    ++   P+LV +L+    + V+ 
Sbjct: 300 LDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVAC 359

Query: 75  GRSHSAAWT 83
           G   + A T
Sbjct: 360 GEYQTCALT 368


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 10/102 (9%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+AVV++ G L+T+G+G +G LGHG  ++   P+ V +LN + V+SV+CG  HT
Sbjct: 432 VACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACGSWHT 491

Query: 474 VCIAD------KGKA----VYAFGDGEYGKLGLGNTGLKPTP 505
             I D      K K+    ++ +GDG+ GKLG G+   K  P
Sbjct: 492 AAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLP 533



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +I+ G KH+A++T +G ++++G G  GRLGH   M+   P+ V +LN +  +SV+CG  +
Sbjct: 324 SISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVACG-EY 382

Query: 473 TVCIADKGKAVYAFGDGEYG 492
             C   K   VY +GD  +G
Sbjct: 383 QTCALTKAGEVYTWGDSRFG 402



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 52/96 (54%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+S  G++  + +   SV +      + +  AI+ G  H A +TS G +YT+G G +G+L
Sbjct: 567 GSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQL 626

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           G G + +  +P  V AL    VES++CG N T  I 
Sbjct: 627 GLGDSDDRNLPTFVEALGDKQVESIACGSNFTAAIC 662



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 41/70 (58%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            K   +  IS G+ HV ++++TG+V+ WG  +  QLGLG+  +   P  V AL +K +  
Sbjct: 591 LKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVES 650

Query: 72  VSAGRSHSAA 81
           ++ G + +AA
Sbjct: 651 IACGSNFTAA 660



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVV-----------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           ++ACG  H+A +           ++ G L+T+G+GD G+LGHG      +P  V  L   
Sbjct: 483 SVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDC 542

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               VSCG   TV + + G+ VY  G   +G+LG
Sbjct: 543 DFAQVSCGRMLTVGLTNMGR-VYTMGSSIHGQLG 575



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++CG   +  +T+ G +YT G+  +G+LG+ ++ +  V      L +  V+++S G  
Sbjct: 545 AQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSY 604

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H   +   G+ VY +G G +G+LGLG++  +  P
Sbjct: 605 HVASLTSTGR-VYTWGKGAHGQLGLGDSDDRNLP 637



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 36/69 (52%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  IS+G +H   ++  G++F+WG     +LG    ++   P+LV +L+    + V+ 
Sbjct: 320 LDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVAC 379

Query: 75  GRSHSAAWT 83
           G   + A T
Sbjct: 380 GEYQTCALT 388


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G YG+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAA 81
           +  L+ + I QVS G  H  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLA 151



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA+++ GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALASDGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G YG+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSYGQLG 275



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|296086178|emb|CBI31619.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 2/123 (1%)

Query: 376 PLECFEGASW-TGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFG 434
           P+ C E +S+   R + +  G  S           Y   IACG +HSAV+T  G L  FG
Sbjct: 250 PVPCVESSSYGKERSSALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITDAGALLMFG 309

Query: 435 NGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL 494
            G YG+ G G+T +   P  V +L  + +E V+ GL HTVCI+  G  VY FG  ++G+L
Sbjct: 310 WGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCISADGD-VYTFGGNQFGQL 368

Query: 495 GLG 497
           G G
Sbjct: 369 GTG 371



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           +A G  H+  ++++G +YTFG   +G+LG G      +P  + A  L   H + VSCG  
Sbjct: 341 VAAGLWHTVCISADGDVYTFGGNQFGQLGTGVDQPETLPRLLDAPSLENAHAKIVSCGAR 400

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           H+  I   GK ++++G  +YG+LGLG+
Sbjct: 401 HSAIITADGK-MFSWGWNKYGQLGLGD 426



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSA++T++G ++++G   YG+LG G  ++  +P +V  L+    ++V+CG  HT
Sbjct: 395 VSCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQVT-LDGCTPKNVACGWWHT 453

Query: 474 VCIADK 479
           + +A+ 
Sbjct: 454 LLLAES 459



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
            + I +++ G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 203 GVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLGSRI 242



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           P+ +N H   +S G  H   ++  G++F+WG N   QLGLG+ ++   P  V  L     
Sbjct: 385 PSLENAHAKIVSCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQV-TLDGCTP 443

Query: 70  RQVSAGRSHS 79
           + V+ G  H+
Sbjct: 444 KNVACGWWHT 453



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   I I  ++ G  H + +S  G V+ +G N   QLG G       P+L+ A  L N
Sbjct: 330 VSSLLGIQIERVAAGLWHTVCISADGDVYTFGGNQFGQLGTGVDQPETLPRLLDAPSLEN 389

Query: 67  KNIRQVSAGRSHSAAWTA 84
            + + VS G  HSA  TA
Sbjct: 390 AHAKIVSCGARHSAIITA 407



 Score = 38.5 bits (88), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 29/122 (23%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-----KVP---------ERVVA 457
           A +A G +H+  ++  G ++ +G G  G+LG G+ +        VP         ER  A
Sbjct: 207 ANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVESSSYGKERSSA 266

Query: 458 LNKVHVES--------------VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
           L + +V +              ++CG  H+  I D G A+  FG G YG+ G G+T  + 
Sbjct: 267 LARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITDAG-ALLMFGWGLYGQCGQGSTDDEL 325

Query: 504 TP 505
           +P
Sbjct: 326 SP 327


>gi|323449305|gb|EGB05194.1| hypothetical protein AURANDRAFT_54835 [Aureococcus anophagefferens]
          Length = 494

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 16/179 (8%)

Query: 234 SRAWKVKLLGEGADDAGGVFDDTITEMCGEL-----------LSGAVPLLVRTPNGVADT 282
            R +KVK  GEG DD GG + +   ++  EL            +  +P+   TPN  +DT
Sbjct: 125 ERTFKVKFDGEGVDDYGGPYREVFAQIPSELQAFKCSPDSSRTTCYLPVFQPTPNTASDT 184

Query: 283 GYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFT 342
             +  ++IL P  +  +  L    FLG L G+A+R+K  +PL   P++WK++V E     
Sbjct: 185 ELDVPKFILRPQYTAPMY-LELCNFLGQLVGIALRSKALMPLEFPPIIWKVLVGEDANAH 243

Query: 343 DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPL 401
           DL   D      L+ I DI+ +   +   P   P +   G  W   +    + G SV L
Sbjct: 244 DLASFDRDALMMLKRISDIYEAWCKDDIRPRETPADPSAGFFWVSNL----SDGTSVEL 298


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 20  IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 79

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 80  QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 113



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 16/203 (7%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 1046 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 1105

Query: 67   KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
            K + +V+ G +H+ AW+            P+S+ +  LP  +P  Y HLQ  P+  +R R
Sbjct: 1106 KKVNRVACGSAHTLAWSTS---------KPASAGK--LPAQVPMEYNHLQEIPIIALRNR 1154

Query: 127  LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
            L LL+  S+L    + +  L G++D+  +  +    +   +LR +   +       + V 
Sbjct: 1155 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 1210

Query: 186  KTMLVGKNFGPSVTVRRLTTKSK 208
             TM+  +  GP V + R+    K
Sbjct: 1211 ATMVRDRQHGPVVELNRIQVLDK 1233



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 901 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 960

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            T+C+ D    V+++GDG+YGKLG G +
Sbjct: 961 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 987



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 394  TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
            + G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P 
Sbjct: 987  SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1046

Query: 454  RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V  L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 1047 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 1098



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 953  IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 1012

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +V +   G AVY +G G+Y +LG G+
Sbjct: 1013 FSVALTKSG-AVYTWGKGDYHRLGHGS 1038



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 414 IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 72  VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 131

Query: 472 HTVCIADKGKA----VYAFGDGEYGKLGLGNTGLKPTP 505
            ++ +   G      VYA+GD ++G+ G G T +   P
Sbjct: 132 FSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKP 169



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 846 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 905

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
            H+ C+   G  +Y +G G YG+LG  ++   LKP
Sbjct: 906 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 939



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 21/124 (16%)

Query: 3   GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTG-----QVFAWGNNSDAQLGLGN 51
           G+ G +IP  +NI       +  I  G +  LA++ +G     QV+AWG+N   Q G G 
Sbjct: 105 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGT 162

Query: 52  QINYREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLG 103
               R+P LV  L  + I +V+ G SHS AWT   +     H P        P  +  LG
Sbjct: 163 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLG 222

Query: 104 LPQD 107
           +P D
Sbjct: 223 VPSD 226



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 844 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 903

Query: 75  GRSHSAAWTA 84
           G +HSA  TA
Sbjct: 904 GGAHSACVTA 913



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 1058 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 1117

Query: 473  TV 474
            T+
Sbjct: 1118 TL 1119



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++V  L  
Sbjct: 7  RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG 66

Query: 67 KNIRQVSAG 75
            + QV+ G
Sbjct: 67 HRVIQVACG 75



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 888 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 947

Query: 67  KNIRQVSAG 75
             +  ++ G
Sbjct: 948 HRVVDIACG 956



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 447 MNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
           MN   P  + AL    +  ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 1   MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 58



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTF-----GNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           I CG + S  +T +G ++T+     G+ D+G+ G+GTT   + P  V  L    +  V+C
Sbjct: 126 IECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 185

Query: 469 GLNHTV 474
           G +H+V
Sbjct: 186 GSSHSV 191


>gi|225449388|ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
           vinifera]
          Length = 484

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 2/123 (1%)

Query: 376 PLECFEGASW-TGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFG 434
           P+ C E +S+   R + +  G  S           Y   IACG +HSAV+T  G L  FG
Sbjct: 273 PVPCVESSSYGKERSSALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITDAGALLMFG 332

Query: 435 NGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL 494
            G YG+ G G+T +   P  V +L  + +E V+ GL HTVCI+  G  VY FG  ++G+L
Sbjct: 333 WGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCISADGD-VYTFGGNQFGQL 391

Query: 495 GLG 497
           G G
Sbjct: 392 GTG 394



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           +A G  H+  ++++G +YTFG   +G+LG G      +P  + A  L   H + VSCG  
Sbjct: 364 VAAGLWHTVCISADGDVYTFGGNQFGQLGTGVDQPETLPRLLDAPSLENAHAKIVSCGAR 423

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           H+  I   GK ++++G  +YG+LGLG+
Sbjct: 424 HSAIITADGK-MFSWGWNKYGQLGLGD 449



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSA++T++G ++++G   YG+LG G  ++  +P +V  L+    ++V+CG  HT
Sbjct: 418 VSCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQVT-LDGCTPKNVACGWWHT 476

Query: 474 VCIADK 479
           + +A+ 
Sbjct: 477 LLLAES 482



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
            + I +++ G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 226 GVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLGSRI 265



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           P+ +N H   +S G  H   ++  G++F+WG N   QLGLG+ ++   P  V  L     
Sbjct: 408 PSLENAHAKIVSCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQV-TLDGCTP 466

Query: 70  RQVSAGRSHS 79
           + V+ G  H+
Sbjct: 467 KNVACGWWHT 476



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   I I  ++ G  H + +S  G V+ +G N   QLG G       P+L+ A  L N
Sbjct: 353 VSSLLGIQIERVAAGLWHTVCISADGDVYTFGGNQFGQLGTGVDQPETLPRLLDAPSLEN 412

Query: 67  KNIRQVSAGRSHSAAWTA 84
            + + VS G  HSA  TA
Sbjct: 413 AHAKIVSCGARHSAIITA 430



 Score = 38.5 bits (88), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 29/122 (23%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-----KVP---------ERVVA 457
           A +A G +H+  ++  G ++ +G G  G+LG G+ +        VP         ER  A
Sbjct: 230 ANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVESSSYGKERSSA 289

Query: 458 LNKVHVES--------------VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
           L + +V +              ++CG  H+  I D G A+  FG G YG+ G G+T  + 
Sbjct: 290 LARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITDAG-ALLMFGWGLYGQCGQGSTDDEL 348

Query: 504 TP 505
           +P
Sbjct: 349 SP 350


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G YG+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAA 81
           +  L+ + I QVS G  H  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLA 151



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA+++ GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALASDGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G YG+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSYGQLG 275



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|348680641|gb|EGZ20457.1| hypothetical protein PHYSODRAFT_442857 [Phytophthora sojae]
          Length = 857

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)

Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERV 455
           + P  F++R   +   +ACG  HSA+V     LY FG G+ G+LG G     + + P R+
Sbjct: 629 TTPTPFSSRW-LHPLQLACGKAHSAIVDVYSNLYCFGLGENGQLGQGEDNLESSEEPVRI 687

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
           + L    V+ V+CG NHT+C++  G+ VYA+GD  +G+LG+G     P
Sbjct: 688 LQLTSTCVQFVACGANHTLCMSVDGR-VYAWGDNSFGQLGMGTKSALP 734



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 47/135 (34%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCG-- 469
           +ACG  H+  ++ +G +Y +G+  +G+LG GT     V  P RV  L  V V  ++CG  
Sbjct: 698 VACGANHTLCMSVDGRVYAWGDNSFGQLGMGTKSALPVGTPYRVEKL--VSVRGIACGGG 755

Query: 470 ----------------------------------------LNHTVCIADKGKAVYAFGDG 489
                                                   + H++ + + G  ++A+G G
Sbjct: 756 QSFILTKNNVLASGSNVAGQLGMGDRIDRTSFEHIPFFRKVWHSMALCENG-TLFAWGFG 814

Query: 490 EYGKLGLGNTGLKPT 504
           E G+LGL +  L+PT
Sbjct: 815 EEGQLGLPDEDLEPT 829



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 429 YLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGD 488
           +L+ FG G+ GRLG     +   P    +   +H   ++CG  H+  I D    +Y FG 
Sbjct: 608 FLFGFGCGNDGRLGTNGDSSITTPT-PFSSRWLHPLQLACGKAHSA-IVDVYSNLYCFGL 665

Query: 489 GEYGKLGLGNTGLKPTPQ 506
           GE G+LG G   L+ + +
Sbjct: 666 GENGQLGQGEDNLESSEE 683



 Score = 38.9 bits (89), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 23/33 (69%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ 52
           ++ G  H L +S  G+V+AWG+NS  QLG+G +
Sbjct: 698 VACGANHTLCMSVDGRVYAWGDNSFGQLGMGTK 730


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           IACG  H+  VT+ G LYT+G+G +  G LGHG+T++  +P+RV   L  + V +VSCG 
Sbjct: 319 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEGLQVSTVSCGT 378

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   G+ +Y FGDG +G LG GN
Sbjct: 379 WHTALITSSGQ-LYTFGDGTFGALGHGN 405



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 12/104 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           + ++CG  H+A++TS+G LYTFG+G +G LGHG       P+ V +L  +   SVSCG+ 
Sbjct: 372 STVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESLKGLRTISVSCGVW 431

Query: 472 HTVCI---------ADKGKAVYAFGDGEYGKLGLGNTG--LKPT 504
           H+  +         A  GK ++ +GDG+  +LG G+    LKPT
Sbjct: 432 HSAAVVEVIMTQSNASSGK-LFTWGDGDKYRLGHGDRSAKLKPT 474



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG KH+A++T    ++T+G    GRLGHG   +   P  + +L+  +VE ++CG  HT
Sbjct: 267 VACGVKHAALITRQAEVFTWGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHT 326

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGNT 499
             +   G  +Y +GDG +  G LG G+T
Sbjct: 327 CAVTATGD-LYTWGDGTHNAGLLGHGST 353



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 39/63 (61%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           ACG  H AV+T+ G +YT+G G  GRLGHG   + KVP  V AL    V+ ++CG + T 
Sbjct: 540 ACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRIACGSSFTA 599

Query: 475 CIA 477
            I+
Sbjct: 600 AIS 602



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 42/61 (68%)

Query: 21  SVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSA 80
           + G+ HV  ++NTG+V+ WG  ++ +LG G+  + + P LV AL ++++++++ G S +A
Sbjct: 540 ACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRIACGSSFTA 599

Query: 81  A 81
           A
Sbjct: 600 A 600



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 10/92 (10%)

Query: 413 AIACGFKHSAVV---------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +++CG  HSA V          S+G L+T+G+GD  RLGHG       P  V +L   + 
Sbjct: 425 SVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDYNF 484

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              +CG   T+ +   G  ++  G   YG+LG
Sbjct: 485 HKSACGHTLTIGLTTSGH-MFTVGSSVYGQLG 515



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 35/65 (53%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G +H   ++   +VF WG     +LG G   +  +P+L+ +LS  N+  ++ G  H+
Sbjct: 267 VACGVKHAALITRQAEVFTWGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHT 326

Query: 80  AAWTA 84
            A TA
Sbjct: 327 CAVTA 331



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-AL 458
           P    + + Y     ACG   +  +T++G+++T G+  YG+LG+    + + P  V   +
Sbjct: 473 PTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLGNPNN-DGRYPRLVEDKV 531

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               V  V+CG  H   + + G+ VY +G G  G+LG G+   +  P
Sbjct: 532 GGGGVVEVACGSYHVAVLTNTGE-VYTWGKGANGRLGHGDIADRKVP 577



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + + +  +S GT H   ++++GQ++ +G+ +   LG GN+     P+ V +L       
Sbjct: 366 LEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESLKGLRTIS 425

Query: 72  VSAGRSHSAA 81
           VS G  HSAA
Sbjct: 426 VSCGVWHSAA 435


>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
          Length = 461

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGHG+  +   P RV+ L    V  ++CG  HT
Sbjct: 129 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHT 188

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 189 LAFVPSSGLIYAFGCGARGQLGTGHT 214



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
          R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 11 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLE 70

Query: 66 NKNIRQVSAGRSHSAA 81
             + QV+AG +HS A
Sbjct: 71 GIPLAQVAAGGAHSFA 86



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 66/160 (41%), Gaps = 21/160 (13%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG G+  +   P+ VL L   
Sbjct: 117 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGS 176

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSL--RLGLPQDIPDHYGHLQNKPLP---- 121
            + Q++ GR H+ A+             PSS L    G         GH  N   P    
Sbjct: 177 EVTQIACGRQHTLAF------------VPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224

Query: 122 --LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPY 159
                   +L  R     Y+VV+ +  G  DQ +V C+ Y
Sbjct: 225 GYWAAHSGQLSARADRFKYRVVKQIFSGG-DQTFVLCSTY 263



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S TS + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 59  SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 118

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 119 KLLRTQKVVYISCGEEHTAVLT 140



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 75  AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +   G  V+ FG G  G+LG G+   +  P+
Sbjct: 135 HTAVLTKSG-GVFTFGAGSCGQLGHGSMNDEVNPR 168



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   + ++G  +T+G   +G+LG G    +   P+RV +L  + +  V+ G  H
Sbjct: 24  VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAH 83

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 84  SFALSLSG-AVFGWGMNNAGQLGLSDEKDRESP 115



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 181 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 235


>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
          Length = 1019

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 4/97 (4%)

Query: 403 FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           F N +  Y   +ACG +H+A++T N  LY FG+ ++G+LG G+      P  V AL    
Sbjct: 77  FKNDIPTY---LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVSKPTCVKALKPEK 133

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           V+  +CG NHT+ + ++GK VYA G    G+LGLG+T
Sbjct: 134 VKFAACGRNHTLVLTEEGK-VYAAGGNNEGQLGLGDT 169



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 5/88 (5%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCG 469
           A I+CG+ HSA VT  G LYTFG  + G+LG      MN KVP+ V  + +  ++ V+CG
Sbjct: 238 AWISCGYYHSAFVTMEGELYTFGETECGKLGLPRQLLMNHKVPQLVPGIPEKVIQ-VACG 296

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
             HTV + +  KAVY FG G++G+LGLG
Sbjct: 297 GGHTVVLTE--KAVYTFGLGQFGQLGLG 322



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT       P+ +  +    +  +SCG NH
Sbjct: 293 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFIFETAEPKILEPIKDQKIIYISCGENH 351

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 352 TALITDVG-LMYTFGDGRHGKLGLG 375



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  VE V+CG  
Sbjct: 345 ISCGENHTALITDVGLMYTFGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACGGC 404

Query: 472 HTVCIA 477
           H +  A
Sbjct: 405 HMIVFA 410



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FKN     ++ G EH   ++   +++ +G+N+  QLGLG++    +P  V 
Sbjct: 68  AENIPSKFWFKNDIPTYLACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVSKPTCVK 127

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++  + GR+H+   T
Sbjct: 128 ALKPEKVKFAACGRNHTLVLT 148



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN--QINYREPQLVLALSN 66
           + A K   +   + G  H L ++  G+V+A G N++ QLGLG+    N   P +    S 
Sbjct: 126 VKALKPEKVKFAACGRNHTLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHP-ICFFTSQ 184

Query: 67  KNIRQVSAGRSHSAAWT 83
             ++Q+SAG + SAA T
Sbjct: 185 HQLKQLSAGSNTSAALT 201


>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 260

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIACG +HSAV+T  G +  FG G YG+ G G+T +   P  V +L  + +E V+ GL H
Sbjct: 87  AIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLWH 146

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           TVC +  G  VYAFG  ++G+LG G+   +  P+
Sbjct: 147 TVCTSADGD-VYAFGGNQFGQLGTGSDQAETLPR 179



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 24/147 (16%)

Query: 375 IPLECFEGASWTGRITPIVTGGQSV---------------------PLTFANRLQYYEAA 413
           IP  C +  +  GR + ++T   +V                     P   ++ L      
Sbjct: 80  IPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEG 139

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE--RVVALNKVHVESVSCGLN 471
           +A G  H+   +++G +Y FG   +G+LG G+     +P      +L  V+V+++SCG  
Sbjct: 140 VAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLENVNVKTISCGAR 199

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           HT  + D GK V+++G  +YG+LGLG+
Sbjct: 200 HTALVTDNGK-VFSWGWNKYGQLGLGD 225



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A+VT NG ++++G   YG+LG G  ++  +P   VA+     ++V+CG  HT
Sbjct: 194 ISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSE-VAIEGCIAKNVACGWWHT 252

Query: 474 VCIADK 479
           + +A+ 
Sbjct: 253 LLLAES 258



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            P+ +N+++  IS G  H   V++ G+VF+WG N   QLGLG+ I+   P  V A+    
Sbjct: 183 CPSLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV-AIEGCI 241

Query: 69  IRQVSAGRSHS 79
            + V+ G  H+
Sbjct: 242 AKNVACGWWHT 252



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL--ALSN 66
           + +   I I  ++ G  H +  S  G V+A+G N   QLG G+      P+L+   +L N
Sbjct: 129 VSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLEN 188

Query: 67  KNIRQVSAGRSHSA 80
            N++ +S G  H+A
Sbjct: 189 VNVKTISCGARHTA 202



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 14 NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSNKNIRQV 72
           + I  ++ G  H L +S+ GQV+ WG   + QLGLG+++     P ++  + + ++ Q 
Sbjct: 10 GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQG 69

Query: 73 S 73
          S
Sbjct: 70 S 70



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 35/120 (29%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM------------------------- 447
           ++A G +H+ V++  G ++ +G G  G+LG G+ +                         
Sbjct: 15  SVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQGSMSSE 74

Query: 448 --NWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             N+++P          +++++CG  H+  I D G AV AFG G YG+ G G+T  + +P
Sbjct: 75  GHNFRIPGSC-------IKAIACGGRHSAVITDAG-AVLAFGWGLYGQCGQGSTDDELSP 126


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 9/101 (8%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++TS G LYTFG+G +G LGHG   +   P+ V ALN      V+CG+ H+
Sbjct: 369 VACGSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVACGVWHS 428

Query: 474 VCIADK---------GKAVYAFGDGEYGKLGLGNTGLKPTP 505
             I +           K +Y +GDG+  +LG G+   +  P
Sbjct: 429 AAIVEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIP 469



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 40/64 (62%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H AV+TS   +YT+G G  GRLGHG   + K P  V AL   HV+S+SCG N T
Sbjct: 535 ISCGAAHVAVLTSRSEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDRHVKSISCGSNFT 594

Query: 474 VCIA 477
            CI 
Sbjct: 595 TCIC 598



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG +H A+ T  G ++T+G    GRLGHGT  +   P+ V +++   V+ +SCG  HT
Sbjct: 262 IVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDFISCGEFHT 321

Query: 474 VCIADKGKAVYAFGDGEY 491
             I+  G  ++ +GDG Y
Sbjct: 322 CAISASGD-LFNWGDGSY 338



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  HSA +            +  LYT+G+GD  RLG G      +P  V AL + + 
Sbjct: 421 VACGVWHSAAIVEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNF 480

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             ++CG N TV +A  G  VY  G  + G+LG
Sbjct: 481 HQLACGQNMTVALATSGH-VYTMGSSDNGQLG 511



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-A 457
           +P      L++    +ACG   +  + ++G++YT G+ D G+LG+  + + K P  V   
Sbjct: 468 IPTCVQALLEHNFHQLACGQNMTVALATSGHVYTMGSSDNGQLGNPKS-DGKQPCLVKDK 526

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L    VE +SCG  H   +  + + VY +G G  G+LG G+   K  P
Sbjct: 527 LAHELVEEISCGAAHVAVLTSRSE-VYTWGMGANGRLGHGDLNDKKAP 573



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 37/59 (62%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  + + P +V AL +++++ +S G
Sbjct: 532 VEEISCGAAHVAVLTSRSEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDRHVKSISCG 590



 Score = 42.0 bits (97), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 35/70 (50%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I  G+ H+   +  G+VF WG     +LG G   +   P+LV ++S   +  +S 
Sbjct: 257 LDVNQIVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDFISC 316

Query: 75  GRSHSAAWTA 84
           G  H+ A +A
Sbjct: 317 GEFHTCAISA 326


>gi|147899019|ref|NP_001086963.1| HECT domain containing E3 ubiquitin protein ligase 3 [Xenopus
           laevis]
 gi|50414918|gb|AAH77829.1| MGC80498 protein [Xenopus laevis]
          Length = 844

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 50/249 (20%)

Query: 193 NFGPSVTVRRLTTKSKQT--------VKPIFAQISRQVVKMKGS----DLRLPSRA---W 237
           NF P + + R T    +          K +F+Q+   +     S    D R P R    W
Sbjct: 452 NFMPCLYINRRTAVEHRDNPLLDPTYKKTVFSQVYEGLKPSDKSEKPLDYRWPVRYEQWW 511

Query: 238 KVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGVADTGYNRDRYIL 291
           + K + EG  D GG F D++ ++  EL   +      +P  VRT N    TG  +D Y+ 
Sbjct: 512 ECKFIAEGIIDQGGGFRDSLADISEELCPSSADSPVPLPFFVRTSNQGNGTGEAQDMYVP 571

Query: 292 NPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFT-DLEDNDTL 350
           NP    S + L  ++++G L G A+R K+ L L L  LVWK +  E V+++ D    D+L
Sbjct: 572 NP----SCKDLAKYEWIGQLMGAALRGKEFLVLALPGLVWKQLTGEEVSWSKDFSAVDSL 627

Query: 351 YAQSLRAIRDIHLSGVTEANFPEIIPLECFE---GASWT-------GRITPIVTGGQSVP 400
             + L  +              E++  E FE   G   T        ++  +V GG S+ 
Sbjct: 628 LVKLLEMM--------------ELMDEETFEFKFGGELTYTTVLSDQKMVELVPGGSSIS 673

Query: 401 LTFANRLQY 409
           + + +R+++
Sbjct: 674 VLYKDRMEF 682


>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cricetulus griseus]
          Length = 1136

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG  +   +N + P+RV+ + +  ++ V+CG  
Sbjct: 233 ISCGYYHSAFVTVDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPEKVIQ-VACGGG 291

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + D  K VYAFG G++G+LGLG
Sbjct: 292 HTVVLTD--KVVYAFGLGQFGQLGLG 315



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNH 136

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   DKG +VYA G    G+LGLG+T  + T
Sbjct: 137 TLVSTDKG-SVYAAGGNNEGQLGLGDTDDRDT 167



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 9/88 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
           +ACG  H+ V+T +  +Y FG G +G+LG GT    T   KV ER+       +  +SCG
Sbjct: 286 VACGGGHTVVLT-DKVVYAFGLGQFGQLGLGTFLFETSEPKVIERI---KDQKISYISCG 341

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            NHT  + D G  +Y FGDG +GKLGLG
Sbjct: 342 ENHTALMTDIG-LMYTFGDGRHGKLGLG 368



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISW--ISCGYYHS 240

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 241 AFVTVDGE-LYTFGEPENGKLGLPN 264



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + 
Sbjct: 61  AENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIK 120

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++  + GR+H+   T
Sbjct: 121 ALKPEKVKLAACGRNHTLVST 141



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N   P       +  V+ ++CG  
Sbjct: 338 ISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACGGC 397

Query: 472 HTVCIA 477
           H +  A
Sbjct: 398 HMLVFA 403



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP--QLVLALSN 66
           I A K   +   + G  H L  ++ G V+A G N++ QLGLG+  + R+   Q+      
Sbjct: 119 IKALKPEKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGD-TDDRDTFHQIGFFTPK 177

Query: 67  KNIRQVSAGRSHSAAWT 83
            NI+Q+SAG + SAA T
Sbjct: 178 DNIKQLSAGANTSAALT 194



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           +I  +S G     A++  G++F WG+NS+ Q+GL N+ N   P  V     K I  +S G
Sbjct: 179 NIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCG 236

Query: 76  RSHSAAWT 83
             HSA  T
Sbjct: 237 YYHSAFVT 244



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ--INYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ  IN+R PQ VL +  K I QV+ G  
Sbjct: 233 ISCGYYHSAFVTVDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPEKVI-QVACGGG 291

Query: 78  HSAAWT 83
           H+   T
Sbjct: 292 HTVVLT 297


>gi|351711668|gb|EHB14587.1| Putative E3 ubiquitin-protein ligase HERC5 [Heterocephalus glaber]
          Length = 800

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 2/95 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +ACG  H+A++T +G ++TFG G YG+LGH +T N   P  V  L+   V  ++CG  H
Sbjct: 76  CVACGGAHTALLTQDGLMFTFGAGKYGQLGHNSTKNELRPRLVTELSGNRVTQIACGRWH 135

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG--NTGLKPTP 505
           T+  A     V++FG GE G+LG G  +  L P P
Sbjct: 136 TLAYASDLDKVFSFGFGEEGQLGNGGKHNQLIPLP 170



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 35/71 (49%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N  +  ++ G  H   ++  G +F +G     QLG  +  N   P+LV  LS   + Q++
Sbjct: 71  NQKVECVACGGAHTALLTQDGLMFTFGAGKYGQLGHNSTKNELRPRLVTELSGNRVTQIA 130

Query: 74  AGRSHSAAWTA 84
            GR H+ A+ +
Sbjct: 131 CGRWHTLAYAS 141


>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
           musculus]
          Length = 1039

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG  +   MN + P+RV+ + +  V  V+CG  
Sbjct: 233 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGG 291

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 292 HTVVLTE--KVVYAFGLGQFGQLGLG 315



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 136

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 137 TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 167



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 9/88 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
           +ACG  H+ V+T    +Y FG G +G+LG GT    T   K+ ER+      H+   SCG
Sbjct: 286 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHI---SCG 341

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            NHT  + + G  +Y FGDG +GKLGLG
Sbjct: 342 ENHTALMTELG-LLYTFGDGRHGKLGLG 368



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISW--ISCGYYHS 240

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 241 AFVTMDGE-LYTFGEPENGKLGLPN 264



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G LYTFG+G +G+LG G     N   P       +  V+ ++CG  
Sbjct: 338 ISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGC 397

Query: 472 HTVCIA 477
           H +  A
Sbjct: 398 HMLVFA 403



 Score = 45.1 bits (105), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + 
Sbjct: 61  AENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIK 120

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++  + GR+H+   T
Sbjct: 121 ALKPEKVKLAACGRNHTLVST 141



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP--QLVLALSN 66
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+  + R+   Q+V     
Sbjct: 119 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGD-TDDRDTFHQIVFFTPA 177

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 178 DTIKQLSAGANTSAALT 194



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL ++ N   P  V     K I  +S G 
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGY 237

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 238 YHSAFVT 244


>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
          Length = 627

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            I  G++HSA VT +G LYT+G GD+GRLGHG      VP  V  ++  +V  V+CG +H
Sbjct: 501 CICAGYRHSAAVTEDGQLYTWGEGDFGRLGHGDNSGRNVPTLVKDIS--NVGQVACGSSH 558

Query: 473 TVCIADKGKAVYAFGDGEYG 492
           T+ ++  G+ V+ FG G+ G
Sbjct: 559 TIAVSQDGRTVWTFGGGKLG 578



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
           H+  +T  G L+++G+GDYG+LGHG     K P+ +   L    V+ +  G  H+  + +
Sbjct: 455 HTLALTVEGALFSWGDGDYGKLGHGNISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTE 514

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            G+ +Y +G+G++G+LG G+   +  P
Sbjct: 515 DGQ-LYTWGEGDFGRLGHGDNSGRNVP 540



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 10/105 (9%)

Query: 406 RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH--- 462
           ++Q  EA   C F    V+ ++G +   G G YGRLG G + N   P+++ + +  H   
Sbjct: 390 KVQQLEAGQYCTF----VIDNDGAVSACGKGSYGRLGLGDSSNQTAPKKL-SFDATHLVK 444

Query: 463 -VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + S      HT+ +  +G A++++GDG+YGKLG GN   +  P+
Sbjct: 445 KISSSKGSDGHTLALTVEG-ALFSWGDGDYGKLGHGNISTQKYPK 488



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 5/78 (6%)

Query: 11  AFKNIHIV---DISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LS 65
           +F   H+V     S G++ H LA++  G +F+WG+    +LG GN    + P+L+   L+
Sbjct: 436 SFDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDYGKLGHGNISTQKYPKLIQGPLA 495

Query: 66  NKNIRQVSAGRSHSAAWT 83
            K ++ + AG  HSAA T
Sbjct: 496 GKVVKCICAGYRHSAAVT 513



 Score = 41.6 bits (96), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I  G  H  AV+  GQ++ WG     +LG G+      P LV  +S  N+ QV+ G SH+
Sbjct: 502 ICAGYRHSAAVTEDGQLYTWGEGDFGRLGHGDNSGRNVPTLVKDIS--NVGQVACGSSHT 559

Query: 80  AA 81
            A
Sbjct: 560 IA 561


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T +G ++TFG G YG+LGH +T N   P  V  L    V  V+CG  HT
Sbjct: 146 LACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHT 205

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++D GK V++FG GE G+LG G T  +  P
Sbjct: 206 LAYVSDLGK-VFSFGSGEEGQLGNGGTHNQLIP 237



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  D+G+LG G T +   P  + AL    VE ++CG +
Sbjct: 92  AQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGS 151

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           HT  +   G  V+ FG G+YG+LG  +T
Sbjct: 152 HTALLTKDG-LVFTFGAGKYGQLGHNST 178



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 4/111 (3%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNKNIRQVSA 74
           +I+ I+ G  H LA+S  G++FAWG N   QLG+G   +    PQ+V  LS   + Q+SA
Sbjct: 37  NIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISA 96

Query: 75  GRSHSAAWTAPPLPPHTPGHTPSSSLRLGL--PQDIPDHYGHLQNKPLPLI 123
           G+SHS A +      ++ G      L LG    +D P     L+N+ +  +
Sbjct: 97  GKSHSMALSVSG-NIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFL 146



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S T+ + +     + +  IS G  H +A+S +G +++WG N   QLGLG+  +   P L+
Sbjct: 76  STTAPQIVEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLI 135

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPL 87
            AL N+ +  ++ G SH+A  T   L
Sbjct: 136 EALENQKVEFLACGGSHTALLTKDGL 161



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G   +    P+ V  L+ V +  +S G +H
Sbjct: 41  ITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSH 100

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  +Y++G  ++G+LGLG+T  K  P
Sbjct: 101 SMALSVSGN-IYSWGRNDFGQLGLGHTDDKDFP 132



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A +N  +  ++ G  H   ++  G VF +G     QLG  +  N   P LV  L+   
Sbjct: 135 IEALENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNR 194

Query: 69  IRQVSAGRSHSAAWTA 84
           + QV+ GR H+ A+ +
Sbjct: 195 VTQVACGRQHTLAYVS 210


>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
          Length = 1001

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG  +   MN + P+RV+ + +  V  V+CG  
Sbjct: 195 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 254 HTVVLTE--KVVYAFGLGQFGQLGLG 277



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 39  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 98

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 99  TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 129



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 9/88 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
           +ACG  H+ V+T    +Y FG G +G+LG GT    T   K+ ER+      H+   SCG
Sbjct: 248 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHI---SCG 303

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            NHT  + + G  +Y FGDG +GKLGLG
Sbjct: 304 ENHTALMTELG-LLYTFGDGRHGKLGLG 330



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 145 LSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 203 AFVTMDGE-LYTFGEPENGKLGLPN 226



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G LYTFG+G +G+LG G     N   P       +  V+ ++CG  
Sbjct: 300 ISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGC 359

Query: 472 HTVCIA 477
           H +  A
Sbjct: 360 HMLVFA 365



 Score = 45.1 bits (105), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + 
Sbjct: 23  AENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIK 82

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++  + GR+H+   T
Sbjct: 83  ALKPEKVKLAACGRNHTLVST 103



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP--QLVLALSN 66
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+  + R+   Q+V     
Sbjct: 81  IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGD-TDDRDTFHQIVFFTPA 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 DTIKQLSAGANTSAALT 156



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL ++ N   P  V     K I  +S G 
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGY 199

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 200 YHSAFVT 206


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGLN 471
           +++CG +H+  +T  G+ Y +G+G  G+LGHGT  +    P+++  L+     SVSCG +
Sbjct: 251 SVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGES 310

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HT  + + GK V+ FGDG +GKLG G
Sbjct: 311 HTAVVTESGK-VFTFGDGRHGKLGQG 335



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 8/108 (7%)

Query: 396 GQSVPLTFANRLQYYEA--AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKV 451
           G+ V  +   +L++ +   +++CG+ H+A+VT +G+LYTFG  + G+LG  ++   N  V
Sbjct: 177 GEEVENSLPKKLKFKKEVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTV 236

Query: 452 PERVV--ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           P+ V   A N  ++ SVSCG  HTV I  +G   YA+GDG  G+LG G
Sbjct: 237 PQSVAMPADNDEYI-SVSCGARHTVAITKQG-HCYAWGDGSQGQLGHG 282



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 1/82 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG +HSAVVT +G LY FG+ D+G+LG G T +   P  V  L    V  V+CG NHT
Sbjct: 43  MACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHT 102

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           +  ++ GK +++FG  E G+LG
Sbjct: 103 IVYSESGK-LFSFGCNEDGQLG 123



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 3/123 (2%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G +  G++  +    + +P    +  Q     IACG  HS +++ +G +Y +GN + G+L
Sbjct: 115 GCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQL 174

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGL 501
           G G  +   +P+++    K  V SVSCG  HT  +   G  +Y FG+ E GKLGL ++ L
Sbjct: 175 GLGEEVENSLPKKLKF--KKEVVSVSCGYYHTALVTRDG-FLYTFGENELGKLGLSSSQL 231

Query: 502 KPT 504
             T
Sbjct: 232 SNT 234



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 54/84 (64%), Gaps = 1/84 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+ V + +G L++FG  + G+LGH    N  +P+ + ++ ++ ++ ++CG  H+
Sbjct: 95  VACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHS 154

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           + +++ G  VY +G+   G+LGLG
Sbjct: 155 IILSEDGD-VYVWGNNNEGQLGLG 177



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ-INYREPQLVLALSNK 67
           +PA  N   + +S G  H +A++  G  +AWG+ S  QLG G + +   EP+ +  LS +
Sbjct: 242 MPA-DNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQ 300

Query: 68  NIRQVSAGRSHSAAWT 83
               VS G SH+A  T
Sbjct: 301 KCISVSCGESHTAVVT 316



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 45/72 (62%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            KN  +V+++ G EH   V+ +G+++ +G+N   QLGLG+  +  +P  V  L  + +R+
Sbjct: 35  IKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRK 94

Query: 72  VSAGRSHSAAWT 83
           V+ GR+H+  ++
Sbjct: 95  VACGRNHTIVYS 106



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I +   + I  I+ GT H + +S  G V+ WGNN++ QLGLG ++    P+ +     
Sbjct: 134 KEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKF--K 191

Query: 67  KNIRQVSAGRSHSAAWT 83
           K +  VS G  H+A  T
Sbjct: 192 KEVVSVSCGYYHTALVT 208



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G  H +  S +G++F++G N D QLG  ++ N   P+ + ++    I+Q++ G  HS
Sbjct: 95  VACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHS 154


>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Short=mRpgr; Flags: Precursor
          Length = 1001

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG  +   MN + P+RV+ + +  V  V+CG  
Sbjct: 195 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 254 HTVVLTE--KVVYAFGLGQFGQLGLG 277



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 39  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 98

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 99  TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 129



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 9/88 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
           +ACG  H+ V+T    +Y FG G +G+LG GT    T   K+ ER+      H+   SCG
Sbjct: 248 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHI---SCG 303

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            NHT  + + G  +Y FGDG +GKLGLG
Sbjct: 304 ENHTALMTELG-LLYTFGDGRHGKLGLG 330



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 145 LSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 203 AFVTMDGE-LYTFGEPENGKLGLPN 226



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G LYTFG+G +G+LG G     N   P       +  V+ ++CG  
Sbjct: 300 ISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGC 359

Query: 472 HTVCIA 477
           H +  A
Sbjct: 360 HMLVFA 365



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + 
Sbjct: 23  AENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIK 82

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++  + GR+H+   T
Sbjct: 83  ALKPEKVKLAACGRNHTLVST 103



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP--QLVLALSN 66
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+  + R+   Q+V     
Sbjct: 81  IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGD-TDDRDTFHQIVFFTPA 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 DTIKQLSAGANTSAALT 156



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL ++ N   P  V     K I  +S G 
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGY 199

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 200 YHSAFVT 206


>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
           rerio]
          Length = 708

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 7/96 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+  +T N  +Y+FG G +G+LGHGT     ++P  V    K  V+  +CG NH
Sbjct: 249 VACGGGHTVALTEN-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENH 307

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTG----LKPT 504
           T  I D G  +Y FGDG +GKLGLG        KPT
Sbjct: 308 TALITDNG-LLYTFGDGRHGKLGLGEENFTNQFKPT 342



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           ++CG+ HSA VT +G LYTFG  D G+LG  T    N KVP++V  +    V+ V+CG  
Sbjct: 196 VSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGG 254

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +    VY+FG G++G+LG G
Sbjct: 255 HTVALTE--NEVYSFGLGQFGQLGHG 278



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A+VT NG L+ FG+ ++G+LG GT      P  V AL    V+  +CG  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           +    +G  +YA G    G+LGLG+
Sbjct: 101 LVFTSRGN-LYACGGNNEGQLGLGD 124



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLNH 472
           ACG  H+A++T NG LYTFG+G +G+LG G     N   P         HV SV+CG  H
Sbjct: 302 ACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCH 361

Query: 473 TVCIA 477
            + +A
Sbjct: 362 MLVLA 366



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            KN   + IS G EH   V+  G++F +G+N+  QLGLG +    +P  V AL ++ ++ 
Sbjct: 33  LKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKL 92

Query: 72  VSAGRSHSAAWTA 84
            + GR+H+  +T+
Sbjct: 93  TACGRTHTLVFTS 105



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G   SA +T +G LY  G+   G++G G   N   P+ V    +V    VSCG  H+
Sbjct: 146 LAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKRVFW--VSCGYYHS 203

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGL 501
             +   G A+Y FG+ + GKLGL    L
Sbjct: 204 AFVTVDG-ALYTFGEKDSGKLGLSTEKL 230


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T +G ++TFG+G YG+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 262 LACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHT 321

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  ++D GK V++FG G+ G+LG G T  +  P+
Sbjct: 322 LAYVSDTGK-VFSFGSGKEGQLGNGGTRNQLIPR 354



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  ++ +G +Y++G  D G+LG G T N + P  + AL+   VE ++CG  HT
Sbjct: 210 ISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHT 269

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +   G  V+ FGDG+YG+LG  +T  +  P+
Sbjct: 270 ALLTKSG-LVFTFGDGKYGQLGHNSTQNELRPR 301



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 40/71 (56%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V IS G  H +A+S +G V++WG N   QLGLG+  N   P  + AL ++ +  ++ G 
Sbjct: 207 LVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGG 266

Query: 77  SHSAAWTAPPL 87
            H+A  T   L
Sbjct: 267 CHTALLTKSGL 277



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSA 74
           +I+ I+ G  H LA+S  G++FAWG N D QLG+G    +   P++V  LS   + Q+SA
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212

Query: 75  GRSHSAA 81
           G +HS A
Sbjct: 213 GEAHSMA 219



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G    G+LG G    +   PE V  L+ V +  +S G  H
Sbjct: 157 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 216

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  VY++G  + G+LGLG+T  K +P
Sbjct: 217 SMALSMSGN-VYSWGRNDCGQLGLGHTYNKESP 248



 Score = 42.4 bits (98), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 38/76 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  +  +  ++ G  H   ++ +G VF +G+    QLG  +  N   P+LV  L    
Sbjct: 251 IEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNR 310

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 311 VTQIACGRQHTLAYVS 326


>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
           musculus]
 gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
          Length = 972

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG  +   MN + P+RV+ + +  V  V+CG  
Sbjct: 233 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGG 291

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 292 HTVVLTE--KVVYAFGLGQFGQLGLG 315



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 136

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 137 TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 167



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 9/88 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
           +ACG  H+ V+T    +Y FG G +G+LG GT    T   K+ ER+      H+   SCG
Sbjct: 286 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHI---SCG 341

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            NHT  + + G  +Y FGDG +GKLGLG
Sbjct: 342 ENHTALMTELG-LLYTFGDGRHGKLGLG 368



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISW--ISCGYYHS 240

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 241 AFVTMDGE-LYTFGEPENGKLGLPN 264



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G LYTFG+G +G+LG G     N   P       +  V+ ++CG  
Sbjct: 338 ISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGC 397

Query: 472 HTVCIA 477
           H +  A
Sbjct: 398 HMLVFA 403



 Score = 45.1 bits (105), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + 
Sbjct: 61  AENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIK 120

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++  + GR+H+   T
Sbjct: 121 ALKPEKVKLAACGRNHTLVST 141



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP--QLVLALSN 66
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+  + R+   Q+V     
Sbjct: 119 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGD-TDDRDTFHQIVFFTPA 177

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 178 DTIKQLSAGANTSAALT 194



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL ++ N   P  V     K I  +S G 
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGY 237

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 238 YHSAFVT 244


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T++G ++TFG G YG+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 259 LACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHT 318

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT 499
           +  ++D GK V++FG G+ G+LG G T
Sbjct: 319 LAYVSDLGK-VFSFGSGKEGQLGNGGT 344



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  ++ +G +Y++G  D G+LG G T     P  +  L+   VE ++CG +HT
Sbjct: 207 ISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHT 266

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +   G  V+ FG G+YG+LG  +T  +  P+
Sbjct: 267 ALLTTDG-LVFTFGAGKYGQLGHNSTQNELRPR 298



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V IS G  H +A+S +G V++WG N   QLGLG+      P L+  L N+ +  ++ G 
Sbjct: 204 LVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGG 263

Query: 77  SHSAAWTAPPL 87
           SH+A  T   L
Sbjct: 264 SHTALLTTDGL 274



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G    +   PQ V  LS   + Q+SAG
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 210

Query: 76  RSHSAA 81
           ++HS A
Sbjct: 211 KAHSMA 216



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           IACG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L+ V +  +S G  H
Sbjct: 154 IACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAH 213

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  VY++G  + G+LGLG+T  +  P
Sbjct: 214 SMALSMSGN-VYSWGRNDLGQLGLGHTDGEDFP 245



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 36/76 (47%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I    N  +  ++ G  H   ++  G VF +G     QLG  +  N   P+LV  L+   
Sbjct: 248 IETLDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNR 307

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 308 VTQIACGRRHTLAYVS 323


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T +G ++TFG+G YG+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 257 LACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHT 316

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  ++D GK V++FG G+ G+LG G T  +  P+
Sbjct: 317 LAYVSDTGK-VFSFGSGKEGQLGNGGTRNQLIPR 349



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  ++ +G +Y++G  D G+LG G T N + P  + AL+   VE ++CG  HT
Sbjct: 205 ISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHT 264

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +   G  V+ FGDG+YG+LG  +T  +  P+
Sbjct: 265 ALLTKSG-LVFTFGDGKYGQLGHNSTQNELRPR 296



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 40/71 (56%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V IS G  H +A+S +G V++WG N   QLGLG+  N   P  + AL ++ +  ++ G 
Sbjct: 202 LVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGG 261

Query: 77  SHSAAWTAPPL 87
            H+A  T   L
Sbjct: 262 CHTALLTKSGL 272



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSA 74
           +I+ I+ G  H LA+S  G++FAWG N D QLG+G    +   P++V  LS   + Q+SA
Sbjct: 148 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 207

Query: 75  GRSHSAA 81
           G +HS A
Sbjct: 208 GEAHSMA 214



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G    G+LG G    +   PE V  L+ V +  +S G  H
Sbjct: 152 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 211

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  VY++G  + G+LGLG+T  K +P
Sbjct: 212 SMALSMSGN-VYSWGRNDCGQLGLGHTYNKESP 243



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 38/76 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  +  +  ++ G  H   ++ +G VF +G+    QLG  +  N   P+LV  L    
Sbjct: 246 IEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNR 305

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 306 VTQIACGRQHTLAYVS 321


>gi|295789059|ref|NP_001171423.1| X-linked retinitis pigmentosa GTPase regulator isoform 4 [Mus
           musculus]
 gi|74223915|dbj|BAE23845.1| unnamed protein product [Mus musculus]
          Length = 651

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG  +   MN + P+RV+ + +  V  V+CG  
Sbjct: 138 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGG 196

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 197 HTVVLTE--KVVYAFGLGQFGQLGLG 220



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 9/88 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
           +ACG  H+ V+T    +Y FG G +G+LG GT    T   K+ ER+      H+   SCG
Sbjct: 191 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHI---SCG 246

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            NHT  + + G  +Y FGDG +GKLGLG
Sbjct: 247 ENHTALMTELG-LLYTFGDGRHGKLGLG 273



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 433 FGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYG 492
           FG+ ++G+LG G+      P  + AL    V+  +CG NHT+   D G  VYA G    G
Sbjct: 2   FGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTG-GVYAAGGNNEG 60

Query: 493 KLGLGNTGLKPT 504
           +LGLG+T  + T
Sbjct: 61  QLGLGDTDDRDT 72



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G LYTFG+G +G+LG G     N   P       +  V+ ++CG  
Sbjct: 243 ISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGC 302

Query: 472 HTVCIA 477
           H +  A
Sbjct: 303 HMLVFA 308



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 88  LSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISW--ISCGYYHS 145

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 146 AFVTMDGE-LYTFGEPENGKLGLPN 169



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 9  IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP--QLVLALSN 66
          I A K   +   + G  H L  ++TG V+A G N++ QLGLG+  + R+   Q+V     
Sbjct: 24 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGD-TDDRDTFHQIVFFTPA 82

Query: 67 KNIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 83 DTIKQLSAGANTSAALT 99



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLNHT 473
           ACG  H+ V T  G +Y  G  + G+LG G T +     ++V       ++ +S G N +
Sbjct: 36  ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 95

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
             + + GK ++ +GD   G++GL
Sbjct: 96  AALTEDGK-LFMWGDNSEGQIGL 117



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL ++ N   P  V     K I  +S G 
Sbjct: 85  IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGY 142

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 143 YHSAFVT 149


>gi|449512316|ref|XP_002199455.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Taeniopygia guttata]
          Length = 165

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG +HT
Sbjct: 25  ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 84

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 85  LAFVPSSGMIYAFGCGTRGQLGTGHT 110



 Score = 49.3 bits (116), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 8  HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
          H+   ++  +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 13 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 72

Query: 68 NIRQVSAGRSHSAAW 82
           + Q++ GR H+ A+
Sbjct: 73 EVSQIACGRHHTLAF 87



 Score = 41.6 bits (96), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 412 AAIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           + IACG  H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 75  SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 119


>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
          Length = 963

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 4/95 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T +G ++TFG+G YG+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 262 LACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHT 321

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT--GLKPTP 505
           +  ++D GK V++FG G+ G+LG G T   L P P
Sbjct: 322 LAYVSDMGK-VFSFGSGKEGQLGNGGTCNQLMPRP 355



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  ++ +G +Y++G  D G+LG G T N   P  + AL+   VE ++CG +HT
Sbjct: 210 ISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGSHT 269

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
             +   G  V+ FGDG+YG+LG  +T
Sbjct: 270 ALLTKSG-LVFTFGDGKYGQLGHNST 294



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 41/71 (57%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V IS G  H +A+S +G V++WG N   QLGLG+  N   P  + AL ++ +  ++ G 
Sbjct: 207 LVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGG 266

Query: 77  SHSAAWTAPPL 87
           SH+A  T   L
Sbjct: 267 SHTALLTKSGL 277



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSA 74
           +I+ I+ G  H LA+S  G++FAWG N D QLG+G    +   P++V  LS   + Q+SA
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212

Query: 75  GRSHSAA 81
           G +HS A
Sbjct: 213 GEAHSMA 219



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G    G+LG G    +   PE V  L+ V +  +S G  H
Sbjct: 157 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 216

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  VY++G  + G+LGLG+T  K +P
Sbjct: 217 SMALSMSGN-VYSWGRNDCGQLGLGHTYNKDSP 248



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 37/76 (48%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  +  +  ++ G  H   ++ +G VF +G+    QLG  +  N   P LV  L    
Sbjct: 251 IEALDDQKVEFLACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNR 310

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 311 VTQIACGRQHTLAYVS 326


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGHG+  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGN--KPEQIGALADQHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 3   GTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLV 61
           G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L+
Sbjct: 72  GNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLI 131

Query: 62  LALSNKNIRQVSAGRSHSAAWTA 84
             L+ + I QVS G  H  A  A
Sbjct: 132 QKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 66/160 (41%), Gaps = 21/160 (13%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG G+  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSL--RLGLPQDIPDHYGHLQNKPLP---- 121
            + Q++ GR H+ A+             PSS L    G         GH  N   P    
Sbjct: 295 EVTQIACGRQHTLAF------------VPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342

Query: 122 --LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPY 159
                   +L  R     Y+VV+ +  G  DQ +V C+ Y
Sbjct: 343 GYWAAHSGQLSARADRFKYRVVKQIFSGG-DQTFVLCSTY 381



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S TS + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +   G  V+ FG G  G+LG G+   +  P+
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLGHGSMNDEVNPR 286



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          I +++ G  H + +   G+V+  G NS  QLG   + N  +P+ + AL++++I  V+ G 
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 77 SHSAA 81
          SHS A
Sbjct: 94 SHSLA 98


>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
          Length = 1009

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T +G ++TFG+G YG+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 232 LACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHT 291

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  ++D GK V++FG G+ G+LG G T  +  P+
Sbjct: 292 LAYVSDTGK-VFSFGSGKEGQLGNGGTRNQLIPR 324



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  ++ +G +Y++G  D G+LG G T N   P  +  L+   VE ++CG  HT
Sbjct: 180 ISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHT 239

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +   G  V+ FGDG+YG+LG  +T  +  P+
Sbjct: 240 ALLTKSG-LVFTFGDGKYGQLGHNSTQNELRPR 271



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSA 74
           +I+ I+ G  H LA+S  G++FAWG N D QLG+G    +   P++V  LS   + Q+SA
Sbjct: 123 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 182

Query: 75  GRSHSAA 81
           G +HS A
Sbjct: 183 GEAHSMA 189



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V IS G  H +A+S +G V++WG N   QLGLG+  N   P  +  L ++ +  ++ G 
Sbjct: 177 LVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGG 236

Query: 77  SHSAAWTAPPL 87
            H+A  T   L
Sbjct: 237 CHTALLTKSGL 247



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G    G+LG G    +   PE V  L+ V +  +S G  H
Sbjct: 127 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 186

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  VY++G  + G+LGLG+T  K +P
Sbjct: 187 SMALSMSGN-VYSWGRNDCGQLGLGHTYNKDSP 218



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G  H   ++ +G VF +G+    QLG  +  N   P+LV  L    + Q++ GR H+
Sbjct: 232 LACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHT 291

Query: 80  AAWTA 84
            A+ +
Sbjct: 292 LAYVS 296


>gi|414879725|tpg|DAA56856.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 431

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 1/131 (0%)

Query: 376 PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGN 435
           P+ C E A ++      + G ++     +  L     AIACG +HSA VT +G L TFG 
Sbjct: 221 PVPCIESALYSKDRPSAMKGNKAAEGHVSKVLGNCVRAIACGGRHSAAVTDSGALLTFGW 280

Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G YG+ G G T +   P  V ++    ++ V+ GL HTVC +  G  VY+FG  ++G+LG
Sbjct: 281 GLYGQCGQGNTDDVLSPTCVSSILGSKMQDVAAGLWHTVCTSVDGD-VYSFGGNQFGQLG 339

Query: 496 LGNTGLKPTPQ 506
            G+   +  P+
Sbjct: 340 TGSDQAETVPK 350



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           +A G  H+   + +G +Y+FG   +G+LG G+     VP+ V A  L   +  SVSCG  
Sbjct: 311 VAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDATSLENKNARSVSCGAR 370

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H+  I D+G+ V+ +G  +YG+LGLG++  +  P
Sbjct: 371 HSAIITDEGE-VFCWGWNKYGQLGLGDSMDRNVP 403



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 3/84 (3%)

Query: 397 QSVP-LTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           ++VP L  A  L+   A +++CG +HSA++T  G ++ +G   YG+LG G +M+  VP  
Sbjct: 346 ETVPKLVDATSLENKNARSVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCS 405

Query: 455 VVALNKVHVESVSCGLNHTVCIAD 478
            V ++  H  +VSCG  HT+ +AD
Sbjct: 406 -VPVDAYHPLNVSCGWWHTLVLAD 428



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 19  DISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSNKNIRQVSAGR 76
           D++ G  H +  S  G V+++G N   QLG G+      P+LV A  L NKN R VS G 
Sbjct: 310 DVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDATSLENKNARSVSCGA 369

Query: 77  SHSA 80
            HSA
Sbjct: 370 RHSA 373



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 27/39 (69%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI 53
           + IV ++ G  H LA+S+ GQV+ WG   + QLGLG++I
Sbjct: 175 VKIVSVAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRI 213


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 12/104 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +A++CG  H+A++TS+G LYTFG+G +G LGHG   +   P+ V +L  +   SVSCG+ 
Sbjct: 373 SAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVW 432

Query: 472 HTVCI---------ADKGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           HT  +         A  GK ++ +GDG+  +LG G+  + LKPT
Sbjct: 433 HTAAVVEVIISQSNASSGK-LFTWGDGDKYRLGHGDRSSKLKPT 475



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           IACG  H+  VT+ G LYT+G+G +  G LGHG+ ++  +P+RV   L+ + V +VSCG 
Sbjct: 320 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSAVSCGT 379

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  I   G+ +Y FGDG +G LG GN      P+
Sbjct: 380 WHTALITSSGQ-LYTFGDGTFGVLGHGNRASCSYPK 414



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG KH+A+VT    ++T+G    GRLGHG   N   P  V +L+  +VE ++CG  HT
Sbjct: 268 VACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHT 327

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             +   G  +Y +GDG +  G LG G+
Sbjct: 328 CAVTATGD-LYTWGDGTHNAGLLGHGS 353



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H AV+T+ G +YT+G G  GRLGHG   + KVP  V AL    V+ V+CG + T
Sbjct: 540 VACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSSFT 599

Query: 474 VCIA 477
             I 
Sbjct: 600 AAIC 603



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 45/65 (69%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V+++ G+ HV  ++N G+V+ WG  ++ +LG G+  + + P LV AL ++++++V+ G 
Sbjct: 537 VVEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGS 596

Query: 77  SHSAA 81
           S +AA
Sbjct: 597 SFTAA 601



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G +H   V+   +VF WG     +LG G   N  +P+LV +LS  N+  ++ G  H+
Sbjct: 268 VACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHT 327

Query: 80  AAWTA 84
            A TA
Sbjct: 328 CAVTA 332



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 413 AIACGFKHSAVV---------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +++CG  H+A V          S+G L+T+G+GD  RLGHG   +   P  V +L   + 
Sbjct: 426 SVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNF 485

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              +CG   T+ +   G  ++  G   YG+LG
Sbjct: 486 HKAACGHTLTIGLTTSGH-IFTVGSPVYGQLG 516



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-L 458
           P    + + Y     ACG   +  +T++G+++T G+  YG+LG+    + + P  V   L
Sbjct: 474 PTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGNPNN-DGRYPRLVEEQL 532

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               V  V+CG  H   + + G+ VY +G G  G+LG G+   +  P
Sbjct: 533 GGGGVVEVACGSYHVAVLTNAGE-VYTWGKGTNGRLGHGDIADRKVP 578


>gi|297740323|emb|CBI30505.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            IACG +HSAV+T  G L TFG G +G+ G G T +   P  V AL+ V V  ++ GL H
Sbjct: 292 GIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSALSGVKVAGIAAGLWH 351

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           T+C + +G+ VYAFG  ++G+LG G    +  P+
Sbjct: 352 TLCFSAEGQ-VYAFGGNQFGQLGTGADQAETLPK 384



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCG 469
           A IA G  H+   ++ G +Y FG   +G+LG G      +P+ + A  L     + VSCG
Sbjct: 343 AGIAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGADQAETLPKLLDASNLENKRAKIVSCG 402

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             H+V + + G+ ++++G  +YG+LGLG+
Sbjct: 403 ARHSVVLTEGGE-IFSWGWNKYGQLGLGD 430



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 404 ANRLQYYEAAI-ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           A+ L+   A I +CG +HS V+T  G ++++G   YG+LG G  ++  +P   V++    
Sbjct: 388 ASNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSP-VSIGGCQ 446

Query: 463 VESVSCGLNHTVCIA 477
           +++V+CG  HT+ +A
Sbjct: 447 LKNVACGWWHTLLLA 461



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + A   + +  I+ G  H L  S  GQV+A+G N   QLG G       P+L+ A  L N
Sbjct: 334 VSALSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGADQAETLPKLLDASNLEN 393

Query: 67  KNIRQVSAGRSHS 79
           K  + VS G  HS
Sbjct: 394 KRAKIVSCGARHS 406



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLV 61
            + I  I+ G  H LA+S+ GQV+ WG   + QLGLG++      P L+
Sbjct: 207 GVRISTIAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRTKLVSSPHLI 255



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            +N     +S G  H + ++  G++F+WG N   QLGLG+ I+   P  V ++    ++ 
Sbjct: 391 LENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSPV-SIGGCQLKN 449

Query: 72  VSAGRSHS 79
           V+ G  H+
Sbjct: 450 VACGWWHT 457



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 37/81 (45%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           +S   I       +  I+ G  H   +++ GQ+  +G     Q GLGN  +   P  V A
Sbjct: 277 SSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSA 336

Query: 64  LSNKNIRQVSAGRSHSAAWTA 84
           LS   +  ++AG  H+  ++A
Sbjct: 337 LSGVKVAGIAAGLWHTLCFSA 357


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T++G ++TFG G YG+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 216 LACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHT 275

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++D GK V++FG G+ G+LG G T  +  P
Sbjct: 276 LAYVSDLGK-VFSFGSGKEGQLGNGGTHNQLIP 307



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  ++ +G +Y++G  D G+LG G T     P  +  L+   VE ++CG +HT
Sbjct: 164 ISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHT 223

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +   G  V+ FG G+YG+LG  +T  +  P+
Sbjct: 224 ALLTTDG-LVFTFGAGKYGQLGHNSTQNELRPR 255



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V IS G  H +A+S +G V++WG N   QLGLG+      P L+  L N+ +  ++ G 
Sbjct: 161 LVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGG 220

Query: 77  SHSAAWTAPPL 87
           SH+A  T   L
Sbjct: 221 SHTALLTTDGL 231



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G    +   PQ V  LS   + Q+SAG
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 167

Query: 76  RSHSAA 81
           ++HS A
Sbjct: 168 KAHSMA 173



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           IACG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L+ V +  +S G  H
Sbjct: 111 IACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAH 170

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  VY++G  + G+LGLG+T  +  P
Sbjct: 171 SMALSMSGN-VYSWGRNDLGQLGLGHTDGEDFP 202



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 36/76 (47%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I    N  +  ++ G  H   ++  G VF +G     QLG  +  N   P+LV  L+   
Sbjct: 205 IETLDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNR 264

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 265 VTQIACGRRHTLAYVS 280


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 9/103 (8%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           + IACG  H+A++TS+G L+T+G+G +G LGHG T     P+ V +L    V+SV+CG  
Sbjct: 372 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPW 431

Query: 472 HTVCIAD-----KGKA----VYAFGDGEYGKLGLGNTGLKPTP 505
           HT  I +     KG A    ++ +GD + GKLG  +  +K  P
Sbjct: 432 HTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLP 474



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 18/157 (11%)

Query: 358 IRDIHLSGVTEANFPEIIPLECFEGASWTGRITPI------------VTGGQSVPLTFAN 405
           ++DI ++     N      L+ FEG     R+  +            + G + +P +   
Sbjct: 195 LKDIMVANRRAQNITHTPKLKTFEGPRVACRLDSLKDVFLWGSVLGSMLGSEDIPKSLPR 254

Query: 406 RLQYYE----AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
            +   +     +IACG  H+A++T  G +YT+G+   GRL     +N   P+ V +L  V
Sbjct: 255 LVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASV 314

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           HV++V+ G  HT  I   G+ ++ +G+G +  LGL N
Sbjct: 315 HVKAVAFGSKHTCAITVSGE-LFEWGEGAHS-LGLMN 349



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 41/70 (58%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            K   + +IS G+ HV  ++ +G+VF WG  ++ QLGLG+  N   P LV AL  +++  
Sbjct: 532 LKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVES 591

Query: 72  VSAGRSHSAA 81
           V  G + +AA
Sbjct: 592 VVCGFNFTAA 601



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 4/121 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDY--G 439
           G+  +GR+   V    S P    +    +  A+A G KH+  +T +G L+ +G G +  G
Sbjct: 287 GSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLG 346

Query: 440 RLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +      N   P + +  ++ + V  ++CG  HT  I   G+ ++ +GDG +G LG G+
Sbjct: 347 LMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQ-LFTYGDGTFGVLGHGD 405

Query: 499 T 499
           T
Sbjct: 406 T 406



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 35/64 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  H AV+T +G ++T+G G  G+LG G   N   P  V AL    VESV CG N T
Sbjct: 540 ISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFT 599

Query: 474 VCIA 477
             I 
Sbjct: 600 AAIC 603



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + + K + +  I+ G  H   ++  G+V+ WG+ S  +L     +N   P++V +L++
Sbjct: 254 RLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLAS 313

Query: 67  KNIRQVSAGRSHSAAWT 83
            +++ V+ G  H+ A T
Sbjct: 314 VHVKAVAFGSKHTCAIT 330



 Score = 42.0 bits (97), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 11/93 (11%)

Query: 413 AIACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ++ACG  H+A +            +G L+T+G+ D G+LGH       +P  V +L    
Sbjct: 425 SVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYD 484

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           +  VSCG   TV +   G  V+  G   +G+LG
Sbjct: 485 LIQVSCGTAVTVVLTVTG-MVFTIGSSRHGQLG 516



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 2/105 (1%)

Query: 402 TFANRLQYYE-AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           T  + L  Y+   ++CG   + V+T  G ++T G+  +G+LG+       +      L  
Sbjct: 475 TCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKT 534

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             V  +S G +H   +   GK V+ +G G  G+LGLG+   + +P
Sbjct: 535 EFVREISSGSSHVAVLTMSGK-VFTWGKGAEGQLGLGDYSNRSSP 578


>gi|168059919|ref|XP_001781947.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666593|gb|EDQ53243.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 415

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 80/159 (50%), Gaps = 10/159 (6%)

Query: 348 DTLYAQSLRAIRDIHL-SGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLT---F 403
           D L  Q + A+ D  L   +       I   EC + A+W       +  G    +T   F
Sbjct: 29  DALTPQRVEALSDAALIVDIACGGAHGIAVFECGDVATWGRGQAGALGHGDETTITVPRF 88

Query: 404 ANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
            + LQ    +  A G+ HSA VT NG LYT G+G +G+LGHG T +  VP RV  L+   
Sbjct: 89  ISSLQGIRISHAAAGWNHSAFVTDNGALYTCGDGTFGQLGHGHTESRLVPGRVEHLSSER 148

Query: 463 VESVSCGLNHTVCIA-DKGKA----VYAFGDGEYGKLGL 496
           +  V+CG+ HT+ +A  +G      VYAFG  + G+LG+
Sbjct: 149 INMVACGMRHTLALAVTQGSVCTSIVYAFGFNKRGQLGI 187



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   V   G + T+G G  G LGHG      VP  + +L  + +   + G NH+
Sbjct: 48  IACGGAHGIAVFECGDVATWGRGQAGALGHGDETTITVPRFISSLQGIRISHAAAGWNHS 107

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + D G A+Y  GDG +G+LG G+T  +  P
Sbjct: 108 AFVTDNG-ALYTCGDGTFGQLGHGHTESRLVP 138



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 32/64 (50%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           IVDI+ G  H +AV   G V  WG      LG G++     P+ + +L    I   +AG 
Sbjct: 45  IVDIACGGAHGIAVFECGDVATWGRGQAGALGHGDETTITVPRFISSLQGIRISHAAAGW 104

Query: 77  SHSA 80
           +HSA
Sbjct: 105 NHSA 108



 Score = 38.5 bits (88), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLNHTVCIADKGKAVYAFGD 488
           ++++G G +G+L  GT ++   P+RV AL+    +  ++CG  H + + + G  V  +G 
Sbjct: 11  VWSWGAGTHGQLACGTLIDALTPQRVEALSDAALIVDIACGGAHGIAVFECGD-VATWGR 69

Query: 489 GEYGKLGLGNTGLKPTPQ 506
           G+ G LG G+      P+
Sbjct: 70  GQAGALGHGDETTITVPR 87


>gi|449478696|ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 577

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 2/90 (2%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           Y+   ++ G+ HS  V+  G LYT G+G +G+LGHG       PE V+  +  HV+ ++C
Sbjct: 316 YFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIAC 375

Query: 469 GLNHTVCI--ADKGKAVYAFGDGEYGKLGL 496
           G+ H++ +     G+ VY FG G+ G+LG+
Sbjct: 376 GMRHSLALVKGSSGEQVYGFGAGKRGQLGI 405



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG  H   +T+ G + T+G G+ G+LG G  ++   P+ V+ L    +  VS G +H+
Sbjct: 269 LSCGGAHVIALTAGGGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHS 328

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++D+GK +Y  GDG +G+LG G+  L+  P+
Sbjct: 329 GFVSDEGK-LYTCGDGSFGQLGHGDYQLRCFPE 360



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           +S G  HV+A++  G V  WG  +  QLGLG+ I+   P+ V+ L +  I  VSAG SHS
Sbjct: 269 LSCGGAHVIALTAGGGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHS 328

Query: 80  A 80
            
Sbjct: 329 G 329



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G  H   VS+ G+++  G+ S  QLG G+      P+ VL  S+K++ +++ G 
Sbjct: 318 ITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIACGM 377

Query: 77  SHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLK 128
            HS A           G       +LG+ + I       Q   LP++ + L+
Sbjct: 378 RHSLALVKGSSGEQVYGFGAGKRGQLGISKKI-------QTVNLPILSSNLE 422


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q++P    + LQ   A  IACG   S  V  NG +Y +G    G+
Sbjct: 153 GYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P R+ AL  + V+ V+CG  HT+ + D+G+ +YA+G   YG+LG GN  
Sbjct: 213 LGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ-MYAWGANSYGQLGTGNRS 271

Query: 501 LKPTP 505
            +  P
Sbjct: 272 NQSYP 276



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS ++TS+G +YT+G  + G++G G+T N  +P RV +   NK+ V +++CG  
Sbjct: 133 VACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAV-NIACGQM 191

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ VY +G    G+LGLGN+G +PTP
Sbjct: 192 CSMAVVENGE-VYVWGYNGNGQLGLGNSGNQPTP 224



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 4/89 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H  V T+ G +YT+G+  Y +LG+GTT N  +P ++    +NK  V  V+CG +H++ + 
Sbjct: 86  HVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNK-KVTEVACGSHHSMILT 144

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             G+ VY +G    G++G G+T  +  P+
Sbjct: 145 SDGE-VYTWGYNNSGQVGSGSTANQAIPR 172



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 218 SGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQSYPV 277

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +       +E  +C   HT     +G  VY +G
Sbjct: 278 PITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWG 311



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 40/77 (51%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N   V+I+ G    +AV   G+V+ WG N + QLGLGN  N   P  + AL  
Sbjct: 173 RVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQG 232

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 233 IRVQRVACGYAHTLVLT 249



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A + I +  ++ G  H L +++ GQ++AWG NS  QLG GN+ N   P  +    ++ 
Sbjct: 227 IAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQSYPVPITVDKDRV 286

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 287 IEIAACHSAHTSA 299



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLALSNKNIRQVSAGRSHSAAWTA 84
           HV+  +  G+V+ WG+N+ +QLG G   N   P Q+   L NK + +V+ G  HS   T+
Sbjct: 86  HVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTS 145



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQV 72
           N  + +++ G+ H + +++ G+V+ WG N+  Q+G G+  N   P+ V + L NK    +
Sbjct: 127 NKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNI 186

Query: 73  SAGRSHSAA 81
           + G+  S A
Sbjct: 187 ACGQMCSMA 195


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  +HV+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV   L    V +++CG   
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMC 216

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 217 SMAVVDAGE-VYVWGYNGNGQLGLGSSGNQPTP 248



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + IH+  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 240 GSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 299

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  +    ++ I   +   +H++A
Sbjct: 300 PTPISVEKDRIIEIAACHSTHTSA 323



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV + G+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 197 RVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
            ++++V+ G +H+   T
Sbjct: 257 IHVQRVACGYAHTLVLT 273



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A     +   +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            +       +E  +C   HT     +G  VY +G
Sbjct: 302 PISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWG 335



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQPIPR 196



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK + 
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVV 208

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 209 NIACGQMCSMA 219



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-L 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169


>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
           catus]
          Length = 993

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT +    VP+ +  +    + S+SCG NH
Sbjct: 248 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG YGKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRYGKLGLG 330



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +H+AVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           +   + GK VYA G    G+LGLG+T  + T
Sbjct: 100 LVSTEGGK-VYAAGGNNEGQLGLGDTEERNT 129



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT+ G LYTFG  + G+LG  +    N ++P+ V  + +  V+ V+CG  
Sbjct: 195 ISCGYYHSAFVTTEGELYTFGEPESGKLGLPNQLLCNHRMPQPVPGIPEKVVQ-VACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  KAVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--KAVYTFGLGQFGQLGLG 277



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           Q+    ++ G   SA +T +G L+ +G+   G++G     N  VP++V     +    +S
Sbjct: 139 QHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKDVTNVCVPQQVTVGKPISW--IS 196

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           CG  H+  +  +G+ +Y FG+ E GKLGL N
Sbjct: 197 CGYYHSAFVTTEGE-LYTFGEPESGKLGLPN 226



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERV 455
           SVP    +      ++I+CG  H+A++T  G +YTFG+G YG+LG G     N  +P   
Sbjct: 284 SVPKVIEHVKDQKISSISCGENHTALITDIGLMYTFGDGRYGKLGLGLENFTNQFLPTLC 343

Query: 456 VALNKVHVESVSCGLNHTVCIA 477
               +   + VSCG  H +  A
Sbjct: 344 SHFLRFIAQLVSCGGCHMLVFA 365



 Score = 45.1 bits (105), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FKN     +S G EH   V+   +++ +G+N+  QLGLG++    +P  V 
Sbjct: 23  AENIPSKFWFKNDIPTVLSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVK 82

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++  + GR+H+   T
Sbjct: 83  ALKPEKVKFAACGRNHTLVST 103



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 8/120 (6%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL +  N   PQ V     K
Sbjct: 133 ISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKDVTNVCVPQQVTV--GK 190

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARL 127
            I  +S G  HSA  T      +T G   S   +LGLP  +     H   +P+P I  ++
Sbjct: 191 PISWISCGYYHSAFVTTEG-ELYTFGEPESG--KLGLPNQLL--CNHRMPQPVPGIPEKV 245



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G+V+A G N++ QLGLG+        L+    S  
Sbjct: 81  VKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFTSQH 140

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156


>gi|359482088|ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like isoform
           1 [Vitis vinifera]
          Length = 514

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            IACG +HSAV+T  G L TFG G +G+ G G T +   P  V AL+ V V  ++ GL H
Sbjct: 328 GIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSALSGVKVAGIAAGLWH 387

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           T+C + +G+ VYAFG  ++G+LG G    +  P+
Sbjct: 388 TLCFSAEGQ-VYAFGGNQFGQLGTGADQAETLPK 420



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCG 469
           A IA G  H+   ++ G +Y FG   +G+LG G      +P+ + A  L     + VSCG
Sbjct: 379 AGIAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGADQAETLPKLLDASNLENKRAKIVSCG 438

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             H+V + + G+ ++++G  +YG+LGLG+
Sbjct: 439 ARHSVVLTEGGE-IFSWGWNKYGQLGLGD 466



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 404 ANRLQYYEAAI-ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           A+ L+   A I +CG +HS V+T  G ++++G   YG+LG G  ++  +P   V++    
Sbjct: 424 ASNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSP-VSIGGCQ 482

Query: 463 VESVSCGLNHTVCIA 477
           +++V+CG  HT+ +A
Sbjct: 483 LKNVACGWWHTLLLA 497



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + A   + +  I+ G  H L  S  GQV+A+G N   QLG G       P+L+ A  L N
Sbjct: 370 VSALSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGADQAETLPKLLDASNLEN 429

Query: 67  KNIRQVSAGRSHS 79
           K  + VS G  HS
Sbjct: 430 KRAKIVSCGARHS 442



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLV 61
            + I  I+ G  H LA+S+ GQV+ WG   + QLGLG++      P L+
Sbjct: 243 GVRISTIAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRTKLVSSPHLI 291



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            +N     +S G  H + ++  G++F+WG N   QLGLG+ I+   P  V ++    ++ 
Sbjct: 427 LENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSPV-SIGGCQLKN 485

Query: 72  VSAGRSHS 79
           V+ G  H+
Sbjct: 486 VACGWWHT 493



 Score = 39.3 bits (90), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 37/81 (45%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           +S   I       +  I+ G  H   +++ GQ+  +G     Q GLGN  +   P  V A
Sbjct: 313 SSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSA 372

Query: 64  LSNKNIRQVSAGRSHSAAWTA 84
           LS   +  ++AG  H+  ++A
Sbjct: 373 LSGVKVAGIAAGLWHTLCFSA 393


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 15/122 (12%)

Query: 399 VPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P      LQ  Y + +ACG  H+AVV S+G L+TFG+G +G LGHG   +  VP  V +
Sbjct: 396 IPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVES 455

Query: 458 LNKVHVESVSCGLNHTVCIAD-------------KGKAVYAFGDGEYGKLGLGNTGLKPT 504
           L  + V  V+CG+ HT  + +             +G+ V+ +GDGE G+LG G+   K  
Sbjct: 456 LIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQ-VFTWGDGEKGQLGHGDNDTKLL 514

Query: 505 PQ 506
           P+
Sbjct: 515 PE 516



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 14/111 (12%)

Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVV-------------TSNGYLYTFGNGDYGRLGHG 444
           SVP    + +      +ACG  H+A V             +S G ++T+G+G+ G+LGHG
Sbjct: 448 SVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHG 507

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
                 +PE V++L   ++  V+CG + TV    +G  VY  G   YG+LG
Sbjct: 508 DNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGH-VYTMGSTAYGQLG 557



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNH 472
           +ACG   +   TS G++YT G+  YG+LG+ T      PERV   + +  VE ++CG  H
Sbjct: 529 VACGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKG-NFPERVEGDIVEASVEEIACGSYH 587

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +  K + +Y +G G  G+LG GN   K  P
Sbjct: 588 VAVLTSKSE-IYTWGKGLNGQLGHGNVENKREP 619



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 38/64 (59%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   +YT+G G  G+LGHG   N + P  V  L +  V++++CG N T
Sbjct: 581 IACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFT 640

Query: 474 VCIA 477
             I 
Sbjct: 641 AVIC 644



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 13/91 (14%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV-------------SNTGQVFAWGNNSDAQLGLGNQI 53
           R + +   + +  ++ G  H  AV             S+ GQVF WG+    QLG G+  
Sbjct: 451 REVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDND 510

Query: 54  NYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
               P+ V++L+N+NI QV+ G S + + T+
Sbjct: 511 TKLLPECVISLTNENICQVACGHSLTVSRTS 541



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 38/64 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G+ HV  +++  +++ WG   + QLG GN  N REP +V  L  K ++ ++ G 
Sbjct: 578 VEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGS 637

Query: 77  SHSA 80
           + +A
Sbjct: 638 NFTA 641



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 54/140 (38%), Gaps = 56/140 (40%)

Query: 414 IACGFKHSAVVTSNGY-------------------------------------------- 429
           IACG  H+ +VT  G                                             
Sbjct: 305 IACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHT 364

Query: 430 --------LYTFGNGDYG--RLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
                   LY++G+G +    LGHG   +  +P+RV   L  ++V  V+CG  HT  +A 
Sbjct: 365 CAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVAS 424

Query: 479 KGKAVYAFGDGEYGKLGLGN 498
            G+ ++ FGDG +G LG G+
Sbjct: 425 SGQ-LFTFGDGTFGALGHGD 443


>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Anolis carolinensis]
          Length = 788

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 3/87 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGL 470
           + +ACG  H+ VV + G +YTFG G YG+LGHGT       P+ V  L K  +  ++CG 
Sbjct: 246 SKVACGGGHT-VVLAEGDVYTFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGE 304

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
           NHT  I + G  +Y FGDG +GKLGLG
Sbjct: 305 NHTALITENG-LMYTFGDGRHGKLGLG 330



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H++VVT NG LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           +   ++G  VYA G    G+LGLG+T  + T
Sbjct: 100 LICTEQGN-VYAAGGNSEGQLGLGDTEERST 129



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 5/88 (5%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCG 469
           + I+CG+ HSA++T +G LYTFG  + G+LG       N K+P+ V  ++   V  V+CG
Sbjct: 193 SCISCGYYHSALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISG-KVSKVACG 251

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
             HTV +A+    VY FG G+YG+LG G
Sbjct: 252 GGHTVVLAEGD--VYTFGLGQYGQLGHG 277



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERV 455
           S P T  +  ++    IACG  H+A++T NG +YTFG+G +G+LG G     N  VP   
Sbjct: 284 SEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLGLGEENYTNQFVPTLC 343

Query: 456 VALNKVHVESVSCGLNHTVCIA 477
               +  V SV+CG  H +  A
Sbjct: 344 SNFLRFIVHSVACGGCHMLVFA 365



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   + IS G EH   V+  G+++ +G+N+  QLG G++    +P  V AL  + ++ 
Sbjct: 32  FKNDKPLHISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLICT 103



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           Q+    +A G   SAV+T +G L  +G+   G++G G      VP + V + K  V  +S
Sbjct: 139 QHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSVPHQ-VDIGKP-VSCIS 196

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           CG  H+  I   G+ +Y FG+ E GKLGL    LK
Sbjct: 197 CGYYHSALITQDGE-LYTFGEPENGKLGLSPKQLK 230


>gi|147790448|emb|CAN69973.1| hypothetical protein VITISV_001453 [Vitis vinifera]
          Length = 498

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 1/85 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            IACG +HSAV+T  G L TFG G +G+ G G T +   P  V AL+ V V  ++ GL H
Sbjct: 293 GIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSALSGVKVXGIAAGLWH 352

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T+C + +G+ VYAFG  ++G+LG G
Sbjct: 353 TLCFSAEGQ-VYAFGGNQFGQLGTG 376



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 404 ANRLQYYEAAI-ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           A+ L+   A I +CG +HS V+T  G ++++G   YG+LG G  ++  +P   V++    
Sbjct: 408 ASNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSP-VSIGGCQ 466

Query: 463 VESVSCGLNHTVCIA 477
           +++V+CG  HT+ +A
Sbjct: 467 LKNVACGWWHTLLLA 481



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 22/107 (20%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-------------------MNWKVPE 453
            IA G  H+   ++ G +Y FG   +G+LG G                     +   +P+
Sbjct: 345 GIAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGADQAEFDSRIXIPSLGEFRKRLTETLPK 404

Query: 454 RVVA--LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            + A  L     + VSCG  H+V + + G+ ++++G  +YG+LGLG+
Sbjct: 405 LLDASNLENKRAKIVSCGARHSVVLTEGGE-IFSWGWNKYGQLGLGD 450



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLV 61
            + I  ++ G  H LA+S+ GQV+ WG   + QLGLG++      P L+
Sbjct: 208 GVRISTVAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRTKLVSSPHLI 256



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            +N     +S G  H + ++  G++F+WG N   QLGLG+ I+   P  V ++    ++ 
Sbjct: 411 LENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSPV-SIGGCQLKN 469

Query: 72  VSAGRSHS 79
           V+ G  H+
Sbjct: 470 VACGWWHT 477



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 37/81 (45%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           +S   I       +  I+ G  H   +++ GQ+  +G     Q GLGN  +   P  V A
Sbjct: 278 SSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSA 337

Query: 64  LSNKNIRQVSAGRSHSAAWTA 84
           LS   +  ++AG  H+  ++A
Sbjct: 338 LSGVKVXGIAAGLWHTLCFSA 358


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 9/103 (8%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           + IACG  H+A++TS+G L+T+G+G +G LGHG T     P+ V +L    V+SV+CG  
Sbjct: 372 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPW 431

Query: 472 HTVCIAD-----KGKA----VYAFGDGEYGKLGLGNTGLKPTP 505
           HT  I +     KG A    ++ +GD + GKLG  +  +K  P
Sbjct: 432 HTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLP 474



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 18/157 (11%)

Query: 358 IRDIHLSGVTEANFPEIIPLECFEGASWTGRITPI------------VTGGQSVPLTFAN 405
           ++DI ++     N      L+ FEG     R+  +            + G + +P +   
Sbjct: 195 LKDIMVANRRAQNITHTPKLKTFEGPRVACRLDSLKDVFLWGSVLGSMLGSEDIPKSLPR 254

Query: 406 RLQYYE----AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
            +   +     +IACG  H+A++T  G +YT+G+   GRL     +N   P+ V +L  V
Sbjct: 255 LVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASV 314

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           HV++V+ G  HT  I   G+ ++ +G+G +  LGL N
Sbjct: 315 HVKAVAFGSKHTCAITVSGE-LFEWGEGAHS-LGLMN 349



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 41/70 (58%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            K   + +IS G+ HV  ++ +G+VF WG  ++ QLGLG+  N   P LV AL  +++  
Sbjct: 532 LKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVES 591

Query: 72  VSAGRSHSAA 81
           V  G + +AA
Sbjct: 592 VVCGFNFTAA 601



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 4/121 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDY--G 439
           G+  +GR+   V    S P    +    +  A+A G KH+  +T +G L+ +G G +  G
Sbjct: 287 GSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLG 346

Query: 440 RLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +      N   P + +  ++ + V  ++CG  HT  I   G+ ++ +GDG +G LG G+
Sbjct: 347 LMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQ-LFTYGDGTFGVLGHGD 405

Query: 499 T 499
           T
Sbjct: 406 T 406



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 35/64 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  H AV+T +G ++T+G G  G+LG G   N   P  V AL    VESV CG N T
Sbjct: 540 ISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFT 599

Query: 474 VCIA 477
             I 
Sbjct: 600 AAIC 603



 Score = 45.1 bits (105), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + + K + +  I+ G  H   ++  G+V+ WG+ S  +L     +N   P++V +L++
Sbjct: 254 RLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLAS 313

Query: 67  KNIRQVSAGRSHSAAWT 83
            +++ V+ G  H+ A T
Sbjct: 314 VHVKAVAFGSKHTCAIT 330



 Score = 41.6 bits (96), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 11/93 (11%)

Query: 413 AIACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ++ACG  H+A +            +G L+T+G+ D G+LGH       +P  V +L    
Sbjct: 425 SVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYD 484

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           +  VSCG   TV +   G  V+  G   +G+LG
Sbjct: 485 LIQVSCGTAVTVVLTVTG-MVFTIGSSRHGQLG 516



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 2/105 (1%)

Query: 402 TFANRLQYYE-AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           T  + L  Y+   ++CG   + V+T  G ++T G+  +G+LG+       +      L  
Sbjct: 475 TCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKT 534

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             V  +S G +H   +   GK V+ +G G  G+LGLG+   + +P
Sbjct: 535 EFVREISSGSSHVAVLTMSGK-VFTWGKGAEGQLGLGDYSNRSSP 578


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 15/122 (12%)

Query: 399 VPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P      LQ  Y + +ACG  H+AVV S+G L+TFG+G +G LGHG   +  VP  V +
Sbjct: 383 IPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVES 442

Query: 458 LNKVHVESVSCGLNHTVCIAD-------------KGKAVYAFGDGEYGKLGLGNTGLKPT 504
           L  + V  V+CG+ HT  + +             +G+ V+ +GDGE G+LG G+   K  
Sbjct: 443 LIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQ-VFTWGDGEKGQLGHGDNDTKLL 501

Query: 505 PQ 506
           P+
Sbjct: 502 PE 503



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 14/111 (12%)

Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVV-------------TSNGYLYTFGNGDYGRLGHG 444
           SVP    + +      +ACG  H+A V             +S G ++T+G+G+ G+LGHG
Sbjct: 435 SVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHG 494

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
                 +PE V++L   ++  V+CG + TV    +G  VY  G   YG+LG
Sbjct: 495 DNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGH-VYTMGSTAYGQLG 544



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 8/108 (7%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           + LT  N  Q     +ACG   +   TS G++YT G+  YG+LG+ T      PERV   
Sbjct: 506 ISLTNENICQ-----VACGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKG-NFPERVEGD 559

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +  VE ++CG  H   +  K + +Y +G G  G+LG GN   K  P
Sbjct: 560 IVEASVEEIACGSYHVAVLTSKSE-IYTWGKGLNGQLGHGNVENKREP 606



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 38/64 (59%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   +YT+G G  G+LGHG   N + P  V  L +  V++++CG N T
Sbjct: 568 IACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFT 627

Query: 474 VCIA 477
             I 
Sbjct: 628 AVIC 631



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 38/64 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G+ HV  +++  +++ WG   + QLG GN  N REP +V  L  K ++ ++ G 
Sbjct: 565 VEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGS 624

Query: 77  SHSA 80
           + +A
Sbjct: 625 NFTA 628



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 13/91 (14%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV-------------SNTGQVFAWGNNSDAQLGLGNQI 53
           R + +   + +  ++ G  H  AV             S+ GQVF WG+    QLG G+  
Sbjct: 438 REVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDND 497

Query: 54  NYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
               P+ V++L+N+NI QV+ G S + + T+
Sbjct: 498 TKLLPECVISLTNENICQVACGHSLTVSRTS 528



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 54/140 (38%), Gaps = 56/140 (40%)

Query: 414 IACGFKHSAVVTSNGY-------------------------------------------- 429
           IACG  H+ +VT  G                                             
Sbjct: 292 IACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHT 351

Query: 430 --------LYTFGNGDYG--RLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
                   LY++G+G +    LGHG   +  +P+RV   L  ++V  V+CG  HT  +A 
Sbjct: 352 CAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVAS 411

Query: 479 KGKAVYAFGDGEYGKLGLGN 498
            G+ ++ FGDG +G LG G+
Sbjct: 412 SGQ-LFTFGDGTFGALGHGD 430


>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
           musculus]
 gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 746

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG  +   MN + P+RV+ + +  V  V+CG  
Sbjct: 233 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGG 291

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 292 HTVVLTE--KVVYAFGLGQFGQLGLG 315



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 136

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 137 TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 167



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 9/88 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
           +ACG  H+ V+T    +Y FG G +G+LG GT    T   K+ ER+      H+   SCG
Sbjct: 286 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHI---SCG 341

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            NHT  + + G  +Y FGDG +GKLGLG
Sbjct: 342 ENHTALMTELG-LLYTFGDGRHGKLGLG 368



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G LYTFG+G +G+LG G     N   P       +  V+ ++CG  
Sbjct: 338 ISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGC 397

Query: 472 HTVCIA 477
           H +  A
Sbjct: 398 HMLVFA 403



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISW--ISCGYYHS 240

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 241 AFVTMDGE-LYTFGEPENGKLGLPN 264



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + A
Sbjct: 62  ENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKA 121

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L  + ++  + GR+H+   T
Sbjct: 122 LKPEKVKLAACGRNHTLVST 141



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP--QLVLALSN 66
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+  + R+   Q+V     
Sbjct: 119 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGD-TDDRDTFHQIVFFTPA 177

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 178 DTIKQLSAGANTSAALT 194



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL ++ N   P  V     K I  +S G 
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGY 237

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 238 YHSAFVT 244


>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 1001

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG  +   MN + P+RV+ + +  V  V+CG  
Sbjct: 195 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPSELLMNHRSPQRVLGIPE-RVIQVACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 254 HTVVLTE--KVVYAFGLGQFGQLGLG 277



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 39  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 98

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 99  TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 129



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 9/88 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
           +ACG  H+ V+T    +Y FG G +G+LG GT    T   K+ ER+      H+   SCG
Sbjct: 248 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHI---SCG 303

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            NHT  + + G  +Y FGDG +GKLGLG
Sbjct: 304 ENHTALMTELG-LLYTFGDGRHGKLGLG 330



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G LYTFG+G +G+LG G     N   P       +  V+ ++CG  
Sbjct: 300 ISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGC 359

Query: 472 HTVCIA 477
           H +  A
Sbjct: 360 HMLVFA 365



 Score = 45.1 bits (105), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + 
Sbjct: 23  AENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIK 82

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++  + GR+H+   T
Sbjct: 83  ALKPEKVKLAACGRNHTLVST 103



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP--QLVLALSN 66
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+  + R+   Q+V     
Sbjct: 81  IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGD-TDDRDTFHQIVFFTPA 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 DTIKQLSAGANTSAALT 156



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL ++ N   P  V     K I  +S G 
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGY 199

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 200 YHSAFVT 206


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 9/103 (8%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           + IACG  H+A++TS+G L+T+G+G +G LGHG T     P+ V +L    V+SV+CG  
Sbjct: 373 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPW 432

Query: 472 HTVCIAD-----KGKA----VYAFGDGEYGKLGLGNTGLKPTP 505
           HT  I +     KG A    ++ +GD + GKLG  +  +K  P
Sbjct: 433 HTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLP 475



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 34/209 (16%)

Query: 311 LFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLED-----NDTLYAQSLRAIRDIHLSG 365
           +FG  + + + L  P  P           TF D++      N  +       ++DI ++ 
Sbjct: 155 IFGGNLDSSEALFYPRHP-----------TFCDIDSYIEKLNPKIATPVKHGLKDIMVAN 203

Query: 366 VTEANFPEIIPLECFEGASWTGRITPI------------VTGGQSVPLTFANRLQYYE-- 411
               N      L+ FEG     R+  +            + G + +P +    +   +  
Sbjct: 204 RRAQNITHTPKLKTFEGPRVACRLDSLKDVFLWGSVLGSMLGSEDIPKSLPRLVGSAKML 263

Query: 412 --AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
              +IACG  H+A++T  G +YT+G+   GRL     +N   P+ V +L  VHV++V+ G
Sbjct: 264 DVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFG 323

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             HT  I   G+ ++ +G+G +  LGL N
Sbjct: 324 SKHTCAITVSGE-LFEWGEGAHS-LGLMN 350



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 41/70 (58%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            K   + +IS G+ HV  ++ +G+VF WG  ++ QLGLG+  N   P LV AL  +++  
Sbjct: 533 LKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVES 592

Query: 72  VSAGRSHSAA 81
           V  G + +AA
Sbjct: 593 VVCGFNFTAA 602



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 35/64 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  H AV+T +G ++T+G G  G+LG G   N   P  V AL    VESV CG N T
Sbjct: 541 ISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFT 600

Query: 474 VCIA 477
             I 
Sbjct: 601 AAIC 604



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + + K + +  I+ G  H   ++  G+V+ WG+ S  +L     +N   P++V +L++
Sbjct: 255 RLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLAS 314

Query: 67  KNIRQVSAGRSHSAAWT 83
            +++ V+ G  H+ A T
Sbjct: 315 VHVKAVAFGSKHTCAIT 331



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 11/93 (11%)

Query: 413 AIACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ++ACG  H+A +            +G L+T+G+ D G+LGH       +P  V +L    
Sbjct: 426 SVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYD 485

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           +  VSCG   TV +   G  V+  G   +G+LG
Sbjct: 486 LIQVSCGTAVTVVLTVTG-MVFTIGSSRHGQLG 517



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG   + V+T  G ++T G+  +G+LG+       +      L    V  +S G +H 
Sbjct: 489 VSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHV 548

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             +   GK V+ +G G  G+LGLG+   + +P
Sbjct: 549 AVLTMSGK-VFTWGKGAEGQLGLGDYSNRSSP 579


>gi|330842712|ref|XP_003293316.1| hypothetical protein DICPUDRAFT_95807 [Dictyostelium purpureum]
 gi|325076362|gb|EGC30154.1| hypothetical protein DICPUDRAFT_95807 [Dictyostelium purpureum]
          Length = 813

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 8/108 (7%)

Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           SVP+     + Y    ++CG +H+  +T+ G ++TFGNG +G+LG G T + + PE V +
Sbjct: 38  SVPMPL---MGYTVKKVSCGVQHTGFITTEGKVFTFGNGSFGKLGIGHTEDVRTPEEVYS 94

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKP 503
           L    V  + CG +HT+ + D+ K V+ +G    G+LGLG T   LKP
Sbjct: 95  L--YGVVDIECGNDHTI-VLDREKRVFTWGSASLGRLGLGKTSSQLKP 139



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 9   IPAF-KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           +P F +++ I D S+G  H+ AV   G+++ WG N + QLG G     R+P  +     +
Sbjct: 197 VPFFSQHVQISDFSIGDRHMAAVDTNGELYTWGCNDEYQLGTGTSFPERKPTSIKIKGFQ 256

Query: 68  NIRQVSAGRSHSAAWT 83
             ++V  G  +++A T
Sbjct: 257 QFKKVRCGGDYTSAVT 272



 Score = 45.8 bits (107), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 7/84 (8%)

Query: 429 YLYTFGNGDYGRLG---HGTTMNWKVPERV---VALNKVHVESVSCGLNHTVCIADKGKA 482
           +L  FG   +G+LG    G  + +         + L    V+ VSCG+ HT  I  +GK 
Sbjct: 8   FLMLFGKNSHGQLGTEIEGKEVIYNQDNYTSVPMPLMGYTVKKVSCGVQHTGFITTEGK- 66

Query: 483 VYAFGDGEYGKLGLGNTGLKPTPQ 506
           V+ FG+G +GKLG+G+T    TP+
Sbjct: 67  VFTFGNGSFGKLGIGHTEDVRTPE 90



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           Q VP  F+  +Q  + +I  G +H A V +NG LYT+G  D  +LG GT+   + P  + 
Sbjct: 195 QLVPF-FSQHVQISDFSI--GDRHMAAVDTNGELYTWGCNDEYQLGTGTSFPERKPTSIK 251

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
                  + V CG ++T  +  +   +Y +G
Sbjct: 252 IKGFQQFKKVRCGGDYTSAVT-QNNQLYIWG 281


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G +G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 248 ISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 307

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 308 LAFVPSSGLIYAFGCGARGQLGTGHT 333



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LGH TT +   +P  +  LN+  +  VSCG  H
Sbjct: 90  VACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWH 149

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 150 CMALAADGQ-FFTWGQNRHGQLGLG 173



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 3/82 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 40  VACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 97

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           + ++D+G+ ++++G G  G+LG
Sbjct: 98  LALSDQGQ-LFSWGAGSDGQLG 118



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLG    + +   P+L
Sbjct: 72  EGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRL 131

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 132 IKKLNQQMILQVSCGNWHCMALAA 155



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H +A++  GQ F WG N   QLGLG +  +   PQ V +L 
Sbjct: 130 RLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLE 189

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 190 GIPLAQVAAGGAHSFA 205



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ + + P  V
Sbjct: 178 SQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHV 237

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 238 KLLRTQKVVYISCGEEHTAVLT 259



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 17/159 (10%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 236 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGS 295

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG------LPQDIPDHYGHLQNKPLP 121
            + Q++ GR H+ A+       +  G      L  G       P  +  H+         
Sbjct: 296 EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNG---- 351

Query: 122 LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYS 160
                 +L +R     Y +V+ +  G  DQ +V C+ Y 
Sbjct: 352 ------QLSSRADSFKYHIVKHIFSGG-DQTFVLCSKYE 383



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G +G+LG
Sbjct: 254 HTAVLTKSG-GVFTFGAGSFGQLG 276



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 300 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 342



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          I +++ G  H + +   G+V+  G N+  QLG   + N  +P+ + AL++++I  V+ G 
Sbjct: 37 IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 94

Query: 77 SHSAA 81
          SHS A
Sbjct: 95 SHSLA 99


>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
 gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 448

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG  H+A V  NGYLYT G+   G+LG G  +  N   P+ V AL+K  V  VSCG +
Sbjct: 27  LACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSCGHS 86

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  I D G+ ++++GD   G+LG+ + G    PQ
Sbjct: 87  HTCAIIDSGE-LFSWGDSSEGQLGINSNGSHYNPQ 120



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 10/120 (8%)

Query: 395 GGQSVPLTFANRL-----QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW 449
           G QS+  +F  +L     +Y    ++CG  H+  +  +G L+++G+   G+LG  +  + 
Sbjct: 57  GQQSLQNSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSH 116

Query: 450 KVPERVVALN----KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             P+ V   +       V  VSCG  HTV +   G+ V +FG G+ G+LG GN   +  P
Sbjct: 117 YNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQ-VCSFGSGKKGQLGTGNQNKQYKP 175



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG+ H+  V  NG + +FG+G  G+LG G       P  + +L++  +  V CG  HT
Sbjct: 137 VSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFLLNSLSQ--IIKVKCGFYHT 194

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
           + + + G+ VY+ G  + G+LG G N G   +P+
Sbjct: 195 LFLDESGR-VYSCGLNDEGQLGQGHNEGNISSPR 227



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV----LAL 64
           + A     ++ +S G  H  A+ ++G++F+WG++S+ QLG+ +  ++  PQLV    L  
Sbjct: 70  VSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKG 129

Query: 65  SNKNIRQVSAGRSHSAA 81
            N  +  VS G  H+ A
Sbjct: 130 INTFVTDVSCGYYHTVA 146



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 2/69 (2%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLALSNKNIRQVSA 74
            I+ +  G  H L +  +G+V++ G N + QLG G N+ N   P+LVL L +  I+++ A
Sbjct: 183 QIIKVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEHSFIKKIFA 242

Query: 75  GRSHSAAWT 83
           G SHSAA T
Sbjct: 243 G-SHSAAIT 250



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 15 IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQV 72
          I I  ++ G +H   V+  G ++  G+N+  +LG+G Q   N  +PQLV ALS   + QV
Sbjct: 22 IVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQV 81

Query: 73 SAGRSHSAA 81
          S G SH+ A
Sbjct: 82 SCGHSHTCA 90



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N  + D+S G  H +AV   GQV ++G+    QLG GNQ    +P L+ +LS   I +V 
Sbjct: 131 NTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFLLNSLS--QIIKVK 188

Query: 74  AGRSHS 79
            G  H+
Sbjct: 189 CGFYHT 194



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 20/109 (18%)

Query: 389 ITPIVTGGQSVPLTFANRLQYYEAA--------------------IACGFKHSAVVTSNG 428
           I  I  G  S  +T AN + ++  +                    I+ G      VT +G
Sbjct: 237 IKKIFAGSHSAAITDANEIYFFGKSQLGQFLYPQLVRICQGDVNEISIGNHFGVAVTYDG 296

Query: 429 YLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
            +Y++G    G+LG G +    +P  V  LN+  V S +CG N+ +C+ 
Sbjct: 297 KVYSWGINQQGQLGQGDSDVRIIPSLVEPLNEKKVISATCGENYVICLG 345


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 9/95 (9%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IACG  HSA+ TSNG L+TFG+G +G LGHG   +   P+ + +LN +    V+CG+ H
Sbjct: 376 SIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKTIKVACGVWH 435

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGN 498
           T  I +           + ++ +GDG+  +LG GN
Sbjct: 436 TAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGN 470



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  ++++G L+T+G+G  + G LGHGT ++  +P+RV   L  + V S++CG 
Sbjct: 322 VACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGT 381

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H+      GK ++ FGDG +G LG G+     +P+
Sbjct: 382 WHSALATSNGK-LFTFGDGTFGALGHGDRKSVSSPK 416



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 6/99 (6%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRL--QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYG 439
           G S  G++    + G+ +P    +RL  ++ E  I+CG  H+AV+TS   ++T+G G  G
Sbjct: 511 GGSAYGQLGNPSSNGK-IPCLVQDRLVGEFVEE-ISCGAYHTAVLTSRSEVFTWGRGANG 568

Query: 440 RLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT--VCI 476
           +LGHG T + K+P  V AL + HV+++SCG N T  +CI
Sbjct: 569 QLGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSICI 607



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H A+VT  G ++T+G    GRLGHG   ++  P+ V +L   +++ V+CG  HT
Sbjct: 270 ISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHT 329

Query: 474 VCIADKGKAVYAFGDGE--YGKLGLG 497
             I+  G  ++ +GDG    G LG G
Sbjct: 330 CAISTSGD-LFTWGDGSNNSGLLGHG 354



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 9/111 (8%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP----ER 454
           +P   ++ + Y    +ACG   +  +T++G+++T G   YG+LG+ ++ N K+P    +R
Sbjct: 476 LPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLGNPSS-NGKIPCLVQDR 534

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +V      VE +SCG  HT  +  + + V+ +G G  G+LG G+T  +  P
Sbjct: 535 LVG---EFVEEISCGAYHTAVLTSRSE-VFTWGRGANGQLGHGDTEDRKLP 581



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVVT----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  H+A +           S+  L+T+G+GD  RLGHG    + +P  V +L   + 
Sbjct: 429 VACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNF 488

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           + ++CG   TV +   G  V+  G   YG+LG
Sbjct: 489 QQLACGHTMTVALTTSGH-VFTMGGSAYGQLG 519



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 38/67 (56%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  IS G  HV  V+  G+VF WG  S  +LG G + ++  P+LV +L+  NI  V+ 
Sbjct: 265 LDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVAC 324

Query: 75  GRSHSAA 81
           G  H+ A
Sbjct: 325 GEYHTCA 331



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  H   +++  +VF WG  ++ QLG G+  + + P LV AL  ++++ +S G 
Sbjct: 540 VEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCGA 599

Query: 77  SHSAA 81
           + +++
Sbjct: 600 NFTSS 604


>gi|296090337|emb|CBI40156.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVALNK-VHVESVSCGL 470
           +ACG  HS  VT +G LYT+G G Y  G LG G  M+  VP+R++  ++ +HV S+SCG 
Sbjct: 362 VACGEYHSCAVTLSGDLYTWGGGSYNFGLLGRGNDMSHWVPKRLIGPSEGIHVSSISCGP 421

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  +   G+ ++ FGDG +G LG G+    P P+
Sbjct: 422 WHTAVVTSAGQ-LFTFGDGTFGVLGHGDCRSVPIPR 456



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + AL  +++E V+CG  H+
Sbjct: 310 IACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVSHPKLIDALKNMNIELVACGEYHS 369

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             +   G  +Y +G G Y  G LG GN
Sbjct: 370 CAVTLSGD-LYTWGGGSYNFGLLGRGN 395



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G  H   V+  G+VF+WG  S  +LG G   +   P+L+ AL N NI  V+ 
Sbjct: 305 LDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVSHPKLIDALKNMNIELVAC 364

Query: 75  GRSHSAAWT 83
           G  HS A T
Sbjct: 365 GEYHSCAVT 373



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 39/65 (60%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +  + +    +
Sbjct: 415 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDCRSVPIPREVESLKGLRTQLLFWETS 474

Query: 472 HTVCI 476
              C+
Sbjct: 475 QKYCL 479


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G Y  G LGHG  ++  VP+RV   L  +HV S+SCG 
Sbjct: 369 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 428

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  +   G+ ++ FGDG +G LG G+T     P+
Sbjct: 429 WHTAVVTSSGQ-LFTFGDGTFGVLGHGDTKSVSKPR 463



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+AVVTS+G L+TFG+G +G LGHG T +   P  V +L        +CG+ 
Sbjct: 422 SSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVW 481

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   K  P
Sbjct: 482 HTAAVVEIMVGNPSSSNCSSGK-LFTWGDGDKGRLGHGDKEAKLVP 526



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + +L+  ++E V+CG  HT
Sbjct: 317 IACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHT 376

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             +   G  +Y +GDG Y  G LG GN
Sbjct: 377 CAVTLSGD-LYTWGDGTYNFGLLGHGN 402



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 38/64 (59%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V+S++CG N T
Sbjct: 592 IACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFT 651

Query: 474 VCIA 477
             I 
Sbjct: 652 ATIC 655



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  +      +ACG   +  +T++G++YT G+  YG+LG+    + K+P RV   
Sbjct: 525 VPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPTRVEGK 583

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L K  VE ++CG  H   +  + + VY +G G  G+LG G+T  + +P
Sbjct: 584 LAKSFVEEIACGAYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRNSP 630



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVV------------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V             S+G L+T+G+GD GRLGHG      VP  V AL   +
Sbjct: 477 ACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPN 536

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G  VY  G   YG+LG
Sbjct: 537 FCRVACGHSLTVALTTSGH-VYTMGSPVYGQLG 568



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 39/69 (56%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G  H   V+  G++F+WG  S  +LG G   +   P+L+ +LSN NI  V+ 
Sbjct: 312 LDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVAC 371

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 372 GEYHTCAVT 380



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 38/64 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K ++ ++ G 
Sbjct: 589 VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGT 648

Query: 77  SHSA 80
           + +A
Sbjct: 649 NFTA 652



 Score = 38.5 bits (88), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V+++GQ+F +G+ +   LG G+  +  +P+ V +L       
Sbjct: 416 LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVI 475

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 476 SACGVWHTAA 485


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T +G ++TFG G YG+LGH +T N   P  V  L    V  V+CG  HT
Sbjct: 487 LACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHT 546

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT 499
           +  ++D GK V++FG G+ G+LG G T
Sbjct: 547 LAYVSDLGK-VFSFGSGKEGQLGNGGT 572



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  ++ +G +Y++G  D G+LG G T     P  + AL+   VE ++CG +HT
Sbjct: 435 ISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHT 494

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
             +   G  V+ FG G+YG+LG  +T
Sbjct: 495 ALLTKDG-LVFTFGAGKYGQLGHNST 519



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G    +   PQLV  LS   + Q+SAG
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 438

Query: 76  RSHSAA 81
           ++HS A
Sbjct: 439 KAHSMA 444



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 40/67 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V IS G  H +A+S +G +++WG N   QLGLG+      P L+ AL N+ +  ++ G 
Sbjct: 432 LVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGG 491

Query: 77  SHSAAWT 83
           SH+A  T
Sbjct: 492 SHTALLT 498



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L+ V +  +S G  H
Sbjct: 382 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAH 441

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  +Y++G  + G+LGLG+T  +  P
Sbjct: 442 SMALSMSGN-IYSWGRNDLGQLGLGHTNGEDFP 473



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  N  +  ++ G  H   ++  G VF +G     QLG  +  N   P+LV  L+   
Sbjct: 476 IEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNR 535

Query: 69  IRQVSAGRSHSAAWTA 84
           + QV+ GR H+ A+ +
Sbjct: 536 VTQVACGRWHTLAYVS 551


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T NG ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +   G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLTTT 121



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 25/163 (15%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++  G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI----------PDHYGHLQN 117
            + Q++ GR H+ A+       +  G      L  G   ++            H G L  
Sbjct: 295 EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSA 354

Query: 118 KPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYS 160
           +P           +RF    Y +V+ +  G  DQ +V C+ Y 
Sbjct: 355 RP-----------DRFK---YHIVKQIFSGG-DQTFVLCSKYE 382



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKNG-GVFTFGAGSCGQLG 275



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G +G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 248 ISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 307

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 308 LAFVPSSGLIYAFGCGARGQLGTGHT 333



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 3/82 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G+   G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 40  VACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGN--KPEQIGALADQHIVHVACGESHS 97

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           + ++D+G+ ++++G G  G+LG
Sbjct: 98  LALSDQGQ-LFSWGAGSDGQLG 118



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LGH TT +   +P  +  LN+  +  VSCG  H
Sbjct: 90  VACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWH 149

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 150 CMALAADGQ-FFTWGQNRHGQLGLG 173



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 1/83 (1%)

Query: 3   GTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLV 61
           G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLG    + +   P+L+
Sbjct: 73  GNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLI 132

Query: 62  LALSNKNIRQVSAGRSHSAAWTA 84
             L+ + I QVS G  H  A  A
Sbjct: 133 KKLNQQMILQVSCGNWHCMALAA 155



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H +A++  GQ F WG N   QLGLG +  +   PQ V +L 
Sbjct: 130 RLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLE 189

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 190 GIPLAQVAAGGAHSFA 205



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ + + P  V
Sbjct: 178 SQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHV 237

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 238 KLLRTQKVVYISCGEEHTAVLT 259



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 17/158 (10%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 236 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGS 295

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG------LPQDIPDHYGHLQNKPLP 121
            + Q++ GR H+ A+       +  G      L  G       P  +  H+         
Sbjct: 296 EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNG---- 351

Query: 122 LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPY 159
                 +L +R     Y +V+ +  G  DQ +V C+ Y
Sbjct: 352 ------QLSSRADSFKYHIVKHIFSGG-DQTFVLCSKY 382



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G +G+LG
Sbjct: 254 HTAVLTKSG-GVFTFGAGSFGQLG 276



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          I +++ G  H + +   G+V+  G+N+  QLG   + N  +P+ + AL++++I  V+ G 
Sbjct: 37 IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 94

Query: 77 SHSAA 81
          SHS A
Sbjct: 95 SHSLA 99



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 300 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 342


>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
           niloticus]
          Length = 1384

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           + CG +H+ V+T    +YTFG G YG+LGHGT +    +P+ +       V  ++CG NH
Sbjct: 249 VCCGGEHTVVLTEKN-VYTFGRGQYGQLGHGTFLFEVHLPKALQHFCNSKVRHIACGENH 307

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  + D G  +Y FGDG +GKLGLG
Sbjct: 308 TAVVTDSG-LLYTFGDGRHGKLGLG 331



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++CG+KHSA VT  G LYTFG    GRLG       N +VP++V  +   HV  V CG  
Sbjct: 196 VSCGYKHSAFVTVYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGV-LGHVTRVCCGGE 254

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +K   VY FG G+YG+LG G
Sbjct: 255 HTVVLTEKN--VYTFGRGQYGQLGHG 278



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAV+T NG L  FG   +G+LG     + + P  V AL    V+  +CG +HT
Sbjct: 41  MSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKLAACGRDHT 100

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           +     G +VY+ G  + G+LGLG+
Sbjct: 101 IVCTFHG-SVYSAGSNQDGQLGLGH 124



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           IACG  H+AVVT +G LYTFG+G +G+LG G    +N   P       +  V+SVSCG +
Sbjct: 301 IACGENHTAVVTDSGLLYTFGDGRHGKLGLGEENFINQFSPTLCTRFLQYAVQSVSCGGH 360

Query: 472 HTVCIA 477
           H + +A
Sbjct: 361 HMLVLA 366



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 39/72 (54%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            KN H   +S G EH   ++  G++  +G N+  QLGL  + + R+P  V AL ++ ++ 
Sbjct: 33  LKNDHPKHMSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKL 92

Query: 72  VSAGRSHSAAWT 83
            + GR H+   T
Sbjct: 93  AACGRDHTIVCT 104


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T NG ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVTAGGAHSFA 204



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 38/76 (50%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++  G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAWT 83
            + Q++ GR H+ A+ 
Sbjct: 295 EVTQIACGRQHTLAFV 310



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +  G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKNG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 53/93 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T +G ++TFG G YG+LGH T+ N  +P +V+ L    V  + CG  HT
Sbjct: 247 IRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +        +YAFG G  G+LG  +T    +PQ
Sbjct: 307 LAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQ 339



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 1/83 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQL 60
           S T    +   +  +I  ++ G +H LA +  G+VFAWG+NS+ QLGL  + +    P++
Sbjct: 71  SRTRAEPVDGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKM 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWT 83
           V +L+ K + Q++ GRSHS A T
Sbjct: 131 VKSLATKQVVQIACGRSHSMALT 153



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 8/116 (6%)

Query: 392 IVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV 451
           I+T  ++ P T  + +      + CG  H+ +V  +G L++FG  DYG+LGH  +     
Sbjct: 21  IITSPRASPFTLVDDI----VQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAE 76

Query: 452 PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
           P  V  L   ++  V+CG  HT+   + G+ V+A+G    G+LGL     + PTP+
Sbjct: 77  P--VDGLEAHNITQVACGAQHTLAQNEWGE-VFAWGSNSNGQLGLNVEESMMPTPK 129



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           IACG  HS  +T+ G +Y +G+  +G+LG G++   +  P  V  L  + +  +SCG + 
Sbjct: 142 IACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADF 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G AVY +G   +G+LGLG+T  +P P
Sbjct: 202 SFAVTPSG-AVYGWGKNSFGQLGLGDTTDRPQP 233



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG   S  VT +G +Y +G   +G+LG G T +   P ++ +L    V  + CG++HT
Sbjct: 195 ISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
             +   G  V+ FG G YG+LG
Sbjct: 255 AALTRDG-GVFTFGAGMYGQLG 275



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 2/104 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ-INYREPQLVLALS 65
           + + +     +V I+ G  H +A++N G+++ WG+NS  QLGLG+      +P LV  L 
Sbjct: 129 KMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQ 188

Query: 66  NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIP 109
              I  +S G   S A T P    +  G      L LG   D P
Sbjct: 189 GIPISHISCGADFSFAVT-PSGAVYGWGKNSFGQLGLGDTTDRP 231



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 19/192 (9%)

Query: 221 QVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVA 280
           ++ K    DL+ P    KVK  GE A+DAGGV  +    +  E+L     +         
Sbjct: 720 ELSKCASQDLKKP---LKVKFHGEEAEDAGGVRKEFFMLLLKEILDPKYGMFAH------ 770

Query: 281 DTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVT 340
              Y   R I   +LS   Q  M+F  +G+L G+AI     + LP   +++K ++ EPV 
Sbjct: 771 ---YQETRAIWFSELSLEEQG-MYF-LIGLLCGLAIYNFTIINLPFPLVLYKKLLAEPVD 825

Query: 341 FTDLEDNDTLYAQSLRAIRDIHLSGVTEA-NFPEIIPLECFEGASWTGRITPIVTGGQSV 399
             D+        +SL ++ D     V +      ++  E F G+  T  + P   GG ++
Sbjct: 826 LDDIGGLCPTLMRSLHSLLDYEGDDVEDVFCLSFVMSREVF-GSVQTDELKP---GGANI 881

Query: 400 PLTFANRLQYYE 411
            +T  N+ +Y +
Sbjct: 882 LVTQKNKQEYVD 893



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   + I I  IS G +   AV+ +G V+ WG NS  QLGLG+  +  +P  + +L  + 
Sbjct: 184 VKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQR 243

Query: 69  IRQVSAGRSHSAAWT 83
           +  +  G  H+AA T
Sbjct: 244 VTYIRCGMDHTAALT 258



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 30/63 (47%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I  G +H  A++  G VF +G     QLG     N   P+ VL L    + Q+  GR H+
Sbjct: 247 IRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHT 306

Query: 80  AAW 82
            A+
Sbjct: 307 LAF 309



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          IV +  G  H + V   G++F++G N   QLG        EP  V  L   NI QV+ G 
Sbjct: 36 IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLEAHNITQVACGA 93

Query: 77 SHSAA 81
           H+ A
Sbjct: 94 QHTLA 98


>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 1/94 (1%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           Y+   ++ G+ HS  V+ NG ++T G+G +G+LGHG   +   P +V      HVE V+C
Sbjct: 104 YFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHGDHASHCSPVKVSCFVDQHVEQVAC 163

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           G+ H++ +  KG  VY FG G+ G+LG+ N  +K
Sbjct: 164 GMRHSLVLL-KGNQVYGFGSGKRGQLGVSNDRVK 196



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGL 470
           +++ACG  H   +TS G + ++G G+ G+LGHG  + N   P+ V +L+   +  VS G 
Sbjct: 54  SSLACGGAHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGW 113

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            H+  ++D G  V+  GDG +G+LG G+     +P
Sbjct: 114 GHSGFVSDNG-CVFTCGDGSFGQLGHGDHASHCSP 147



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSN 66
           H P+  +I    ++ G  HV+A+++ G+V +WG  +  QLG G  + N   P+ V +L  
Sbjct: 46  HQPSLSSI--SSLACGGAHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDG 103

Query: 67  KNIRQVSAGRSHSA 80
             I  VSAG  HS 
Sbjct: 104 YFITHVSAGWGHSG 117



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 36/73 (49%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + +     I  +S G  H   VS+ G VF  G+ S  QLG G+  ++  P  V    +
Sbjct: 96  KAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHGDHASHCSPVKVSCFVD 155

Query: 67  KNIRQVSAGRSHS 79
           +++ QV+ G  HS
Sbjct: 156 QHVEQVACGMRHS 168



 Score = 38.9 bits (89), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 26/53 (49%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           +P      I DI+ G EH + V+  G++  WG     QLGLG+  +   P  V
Sbjct: 309 VPGLDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDRISPVTV 361


>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 2/90 (2%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           Y+   ++ G+ HS  V+  G LYT G+G +G+LGHG       PE V+  +  HV+ ++C
Sbjct: 316 YFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIAC 375

Query: 469 GLNHTVCI--ADKGKAVYAFGDGEYGKLGL 496
           G+ H++ +     G+ VY FG G+ G+LG+
Sbjct: 376 GMRHSLALVKGSSGEQVYGFGAGKRGQLGI 405



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG  H   +T+ G + T+G G+ G+LG G  ++   P+ V+ L    +  VS G +H+
Sbjct: 269 LSCGGAHVIALTAGGGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHS 328

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++D+GK +Y  GDG +G+LG G+  L+  P+
Sbjct: 329 GFVSDEGK-LYTCGDGSFGQLGHGDYQLRCFPE 360



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           +S G  HV+A++  G V  WG  +  QLGLG+ I+   P+ V+ L +  I  VSAG SHS
Sbjct: 269 LSCGGAHVIALTAGGGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHS 328

Query: 80  A 80
            
Sbjct: 329 G 329



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 11/105 (10%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW--KVP--------ERVVALNKV 461
           + +A G+ H+ V+T  G LY  G   +G L     +N    +P        + V AL+ +
Sbjct: 471 SKVALGWNHALVLTDEGELYMLGGKHHGALSDSEMLNSMKSLPGDSREDNFQAVPALSGI 530

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V  ++ G  H+V + + G  V  +G GE+G+LGLG+T     PQ
Sbjct: 531 KVLDIAAGAEHSVIVTEDG-GVKTWGWGEHGQLGLGDTCDHTNPQ 574



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           +PA   I ++DI+ G EH + V+  G V  WG     QLGLG+  ++  PQ V
Sbjct: 524 VPALSGIKVLDIAAGAEHSVIVTEDGGVKTWGWGEHGQLGLGDTCDHTNPQTV 576



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G  H   VS+ G+++  G+ S  QLG G+      P+ VL  S+K++ +++ G 
Sbjct: 318 ITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIACGM 377

Query: 77  SHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLK 128
            HS A           G       +LG+ + I       Q   LP++ + L+
Sbjct: 378 RHSLALVKGSSGEQVYGFGAGKRGQLGISKKI-------QTVNLPILSSNLE 422



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 8/70 (11%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES------VS 467
           IA G +HS +VT +G + T+G G++G+LG G T +   P+  V LN + +ES      V 
Sbjct: 535 IAAGAEHSVIVTEDGGVKTWGWGEHGQLGLGDTCDHTNPQ-TVNLN-LKLESTAYDVKVY 592

Query: 468 CGLNHTVCIA 477
           CG   TV +A
Sbjct: 593 CGSGFTVAVA 602


>gi|345292913|gb|AEN82948.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292917|gb|AEN82950.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292919|gb|AEN82951.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292921|gb|AEN82952.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292923|gb|AEN82953.1| AT5G12350-like protein, partial [Capsella grandiflora]
          Length = 169

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNH 472
           +ACG  HS  V+ +G LYT+G GD+G LGHG  ++  VP+RV   +  +HV S++CG  H
Sbjct: 36  VACGEYHSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYH 95

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  +   G+ ++ FGDG +G LG G+
Sbjct: 96  TAVVTSAGQ-LFTFGDGTFGVLGHGD 120



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+AVVTS G L+TFG+G +G LGHG   +  +P  + +L  +     +CG+ 
Sbjct: 87  SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVW 146

Query: 472 HTVCIAD 478
           HT  + +
Sbjct: 147 HTAAVVE 153



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 431 YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490
           +++G    GRLGHG   N + P+ + AL   ++E V+CG  H+  ++  G  +Y +G G+
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGD-LYTWGKGD 59

Query: 491 YGKLGLGN 498
           +G LG GN
Sbjct: 60  FGILGHGN 67



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 26/45 (57%)

Query: 37 FAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAA 81
          F+WG  S+ +LG G   N + P+L+ AL   NI  V+ G  HS A
Sbjct: 1  FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCA 45


>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
          Length = 957

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 4/95 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++T +G L+TFG G +G+LGH +T N   P  V  L +  V  ++CG  HT
Sbjct: 181 VACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVEYRVTQIACGRWHT 240

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT--GLKPTP 505
           +  ++D GK V++FG G+ G+LG G T   L P P
Sbjct: 241 LAYVSDLGK-VFSFGSGKDGQLGNGGTRDQLMPLP 274



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  ++G+LG G T +   P  +  L+   VE V+CG +
Sbjct: 127 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGS 186

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  +   G  ++ FG G++G+LG  +T
Sbjct: 187 HSALLTQDG-LLFTFGAGKHGQLGHNST 213



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 9/91 (9%)

Query: 6   GRHIPAFKNIHIVD---------ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           GR  P+     IV+         IS G  H +A+S +G +++WG N   QLGLG+  +  
Sbjct: 106 GRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD 165

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWTAPPL 87
            P L+  L N+ +  V+ G SHSA  T   L
Sbjct: 166 YPSLIEGLDNQKVEFVACGGSHSALLTQDGL 196



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 425 TSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAV 483
           T +G L+ +G   +G+LG G    +   P+ V  L  V +  +S G  H++ ++  G  +
Sbjct: 87  TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN-I 145

Query: 484 YAFGDGEYGKLGLGNTGLKPTP 505
           Y++G  E+G+LGLG+T  K  P
Sbjct: 146 YSWGKNEFGQLGLGHTESKDYP 167



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 33  TGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAGRSHSAA 81
           +G++FAWG N   QLG+G +  +   PQ+V  L+   + Q+SAG +HS A
Sbjct: 89  SGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMA 138


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P    + LQ      IACG   S  V  NG +Y +G    G+
Sbjct: 193 GYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQ 252

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + V+ V+CG  HT+ + D+G+ +YA+G   YG+LG GN  
Sbjct: 253 LGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQ-IYAWGANSYGQLGTGNKS 311

Query: 501 LKPTP 505
            +  P
Sbjct: 312 NQSYP 316



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 63/94 (67%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G +YT+G  + G++G G+T N  +P RV +   NKV V +++CG  
Sbjct: 173 VACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKV-VVNIACGQM 231

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ VY +G    G+LGLG++G +PTP
Sbjct: 232 CSMAVVENGE-VYVWGYNGNGQLGLGSSGNQPTP 264



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H  + T  G +YT+G+  Y +LG+GTT +  VP +V    +NK  +E V+CG +H++ + 
Sbjct: 126 HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIE-VACGSHHSMVLT 184

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             G+ VY +G    G++G G+T  +P P+
Sbjct: 185 SDGE-VYTWGYNNSGQVGSGSTANQPIPR 212



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  ++ G  H L +++ GQ++AWG NS  QLG GN+ N   
Sbjct: 256 GSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY 315

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V    ++ +   +   +H++A
Sbjct: 316 PTTVTVDKDRVVEIAACHSAHTSA 339



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV   G+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 213 RVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 272

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 273 IRVQRVACGCAHTLVLT 289



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 39/94 (41%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG  H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 258 SGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT 317

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       VE  +C   HT     +   VY +G
Sbjct: 318 TVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWG 351



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQV 72
           N  +++++ G+ H + +++ G+V+ WG N+  Q+G G+  N   P+ V + L NK +  +
Sbjct: 167 NKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNI 226

Query: 73  SAGRSHSAA 81
           + G+  S A
Sbjct: 227 ACGQMCSMA 235



 Score = 39.3 bits (90), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLALSNKNIRQVSAGRSHSAAWTA 84
           HV+  +  G+V+ WG+N+ +QLG G   +   P Q+   L NK + +V+ G  HS   T+
Sbjct: 126 HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTS 185


>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
          Length = 681

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG  +   MN + P+RV+ + +  V  V+CG  
Sbjct: 233 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGG 291

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 292 HTVVLTE--KVVYAFGLGQFGQLGLG 315



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 136

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 137 TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 167



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 9/88 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
           +ACG  H+ V+T    +Y FG G +G+LG GT    T   K+ ER+      H+   SCG
Sbjct: 286 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHI---SCG 341

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            NHT  + + G  +Y FGDG +GKLGLG
Sbjct: 342 ENHTALMTELG-LLYTFGDGRHGKLGLG 368



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G LYTFG+G +G+LG G     N   P       +  V+ ++CG  
Sbjct: 338 ISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGC 397

Query: 472 HTVCIA 477
           H +  A
Sbjct: 398 HMLVFA 403



 Score = 45.8 bits (107), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + A
Sbjct: 62  ENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKA 121

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L  + ++  + GR+H+   T
Sbjct: 122 LKPEKVKLAACGRNHTLVST 141



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISW--ISCGYYHS 240

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 241 AFVTMDGE-LYTFGEPENGKLGLPN 264



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP--QLVLALSN 66
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+  + R+   Q+V     
Sbjct: 119 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGD-TDDRDTFHQIVFFTPA 177

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 178 DTIKQLSAGANTSAALT 194



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL ++ N   P  V     K I  +S G 
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGY 237

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 238 YHSAFVT 244


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  HS  VT +G LYT+GNG  +YG LGHG  ++  VP+RV   L  +HV  +SCG 
Sbjct: 366 VACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGP 425

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 426 WHTAVVTSAGQ-LFTFGDGTFGALGHGD 452



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + AL+  ++E V+CG  H+
Sbjct: 314 IACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHS 373

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLGN 498
             +   G  +Y +G+G   YG LG GN
Sbjct: 374 CAVTLSGD-LYTWGNGTYNYGLLGHGN 399



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ HT
Sbjct: 421 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHT 480

Query: 474 VCIAD-----------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + +               ++ +GDG+ G+LG  +   K  P
Sbjct: 481 AAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVP 523



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 399 VPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P+    +L + +   IACG  H AV+TS   +YT+G G  GRLGHG T +   P  V A
Sbjct: 572 LPILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEA 631

Query: 458 LNKVHVESVSCGLNHTVCIA 477
           L    V+S++CG   T  I 
Sbjct: 632 LKDKDVKSIACGTTFTAAIC 651



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G  H   V+  G+VF+WG  S  +LG G   +   P+L+ ALSN NI  V+ 
Sbjct: 309 LDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVAC 368

Query: 75  GRSHSAAWT 83
           G  HS A T
Sbjct: 369 GEYHSCAVT 377



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 4/120 (3%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
           GR+  +    + VP   A   ++    +ACG   +  +T++G +YT G+  YG+LG+   
Sbjct: 510 GRLGHVDKEAKLVPTCVA-LAEHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQLGN-PQ 567

Query: 447 MNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + K+P  V   L++  VE ++CG  H   +  + + VY +G G  G+LG G+T  + TP
Sbjct: 568 ADGKLPILVEGKLSESFVEEIACGAYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRNTP 626



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 40/65 (61%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K+++ ++ G 
Sbjct: 585 VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGT 644

Query: 77  SHSAA 81
           + +AA
Sbjct: 645 TFTAA 649



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 14/93 (15%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +  L+T+G+GD GRLGH       VP   VAL + +
Sbjct: 474 ACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPT-CVALAEHN 532

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           V  V+CG + TV +   G+ VY  G   YG+LG
Sbjct: 533 VCQVACGHSLTVALTTSGR-VYTMGSPVYGQLG 564


>gi|440790501|gb|ELR11783.1| RasGEF domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 2063

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG+ H AV+   G LYT+G G  GRLGHG   + K P +V +L    +  ++CG  H 
Sbjct: 181 IACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQIACGFAHM 240

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++DKG+ V+  G G  G+LGL     K  P+
Sbjct: 241 AALSDKGE-VFVCGTG-CGRLGLDGEQGKSNPE 271



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG+ H+A +++ G L+T+G G YGRLGHG   +   P  V  L   ++  V+ G  HT
Sbjct: 14  VACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTNIVGVALGERHT 73

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
              ++ G+ +Y++GD  +G LG G 
Sbjct: 74  AAFSETGE-LYSWGDANFGVLGHGE 97



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 41/76 (53%)

Query: 8  HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           + + + I I  ++ G  H  A+S  G +F WG     +LG G++ +   P+LV  L N 
Sbjct: 2  QVASLRRIKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNT 61

Query: 68 NIRQVSAGRSHSAAWT 83
          NI  V+ G  H+AA++
Sbjct: 62 NIVGVALGERHTAAFS 77



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 9/100 (9%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-----WKV 451
           Q+ P      L      +A G +H+A  +  G LY++G+ ++G LGHG            
Sbjct: 49  QNAPRLVGELLNTNIVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTT 108

Query: 452 PERVVALNKV---HVESVSCGLNHTVCIADKGKAVYAFGD 488
           P+ +  L++V    V  V+CG  HT+C     K  Y +GD
Sbjct: 109 PKLIEYLSRVLRKKVTHVACGAYHTLCTT-ADKLTYIWGD 147



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 16/94 (17%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG---------DYGRLGHGTTMNWKVPERVVALNKVHVE 464
           +ACG  H+   T++   Y +G+G         D+GR     T+ W  P+ + AL    V+
Sbjct: 126 VACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGR-----TIEW-TPQSIGALAGRGVQ 179

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            ++CG  H   + D G  +Y +G+G  G+LG G+
Sbjct: 180 QIACGWAHCAVLMDTGD-LYTWGEGAGGRLGHGD 212



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 40/75 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I A     +  I+ G  H   + +TG ++ WG  +  +LG G++ +++EP  V +L  
Sbjct: 168 QSIGALAGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRG 227

Query: 67  KNIRQVSAGRSHSAA 81
             I Q++ G +H AA
Sbjct: 228 TRIVQIACGFAHMAA 242



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 12/76 (15%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG-----------HGTTMNWKVPERVVALNKVH 462
           IACGF H A ++  G ++  G G  GRLG           H    N K+P RV  L  + 
Sbjct: 233 IACGFAHMAALSDKGEVFVCGTG-CGRLGLDGEQGKSNPEHTEVANQKIPRRVEPLRGLQ 291

Query: 463 VESVSCGLNHTVCIAD 478
           +  V+CG+  T+ + +
Sbjct: 292 ILQVACGMISTIVLQN 307



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +V +L ++ +  V+CG +HT  I+ KG  ++ +G G YG+LG G+   +  P+
Sbjct: 2   QVASLRRIKISRVACGWSHTAAISAKG-LLFTWGMGRYGRLGHGDETDQNAPR 53



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 10/90 (11%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN------QINYREPQL 60
           R +    N +IV +++G  H  A S TG++++WG+ +   LG G       QI    P+L
Sbjct: 53  RLVGELLNTNIVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQT-TPKL 111

Query: 61  VLALS---NKNIRQVSAGRSHSAAWTAPPL 87
           +  LS    K +  V+ G  H+   TA  L
Sbjct: 112 IEYLSRVLRKKVTHVACGAYHTLCTTADKL 141


>gi|115313097|gb|AAI24338.1| HECT domain containing 3 [Danio rerio]
          Length = 854

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 37/255 (14%)

Query: 168 RPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKG 227
           +P F PR+Y       + + + +     P++ V    T     +  ++  +       K 
Sbjct: 462 KPNFMPRLY-------INRRLAMEHRDNPTLDV----TCKNAVLTQVYEGLKPSDKYEKT 510

Query: 228 SDLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNG 278
            D R  +R    W+ K + EG  D GG F D++ +M  EL   +      +P   RT N 
Sbjct: 511 LDYRWSARYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSSECPLPLPFFTRTSNQ 570

Query: 279 VADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEP 338
            A  G  RD Y+ NP    S +    F+++G L G A+R K  L L L  LVWK ++ E 
Sbjct: 571 GA--GEARDFYVPNP----SCREFNKFEWIGQLMGAALRGKDFLVLALPGLVWKQLIGEA 624

Query: 339 VTFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII---PLECFEGASWTGRITPIVT 394
           V++T D    D++  + L A+  +           E++   PL         GR+  ++ 
Sbjct: 625 VSWTKDFPAVDSVLVKLLEAMEHMDKETFDFKFGQELVYTTPLS-------DGRLVELIP 677

Query: 395 GGQSVPLTFANRLQY 409
           GG  V + + +R+++
Sbjct: 678 GGSGVVVRYEDRVEF 692


>gi|348677090|gb|EGZ16907.1| hypothetical protein PHYSODRAFT_498805 [Phytophthora sojae]
          Length = 4654

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 25/225 (11%)

Query: 212  KPIFAQISRQVVKMKGSDLRLP---------SRAWKVKLLGEGADDAGGVFDDTITEMCG 262
            + +F Q+ R++     S  R            RA+KVK LGEG +D GG +     ++  
Sbjct: 4253 RSVFGQLYREMRAWSDSFFRRAYCGKGHGGQRRAFKVKFLGEGVNDYGGPYRAVFEQIVD 4312

Query: 263  ELL----------SGAVPLLVRTPNGVADTGYNRDRYILNPDLSESL-----QSLMHFKF 307
            EL            G +PLL+  PN  + TG N+D+++LNP    +L      +L   +F
Sbjct: 4313 ELQMDNVELAKGEQGLLPLLIPCPNRRSGTGSNQDKFLLNPSCGTALLANGPMALDLHRF 4372

Query: 308  LGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDI-HLSGV 366
            LG L G A+R    + L L  LVW+ +    V+   LE  D   A +L  + ++   +  
Sbjct: 4373 LGKLIGTAVRHGLQMGLDLPALVWRPLAGLEVSRAHLESVDVAAANNLNRVGELSTETES 4432

Query: 367  TEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYE 411
                  E++           G   P+V  G+ + +T ANR  Y +
Sbjct: 4433 AAEEAEEVLGYLTLSTTLSDGVEVPLVPQGEKMAVTLANRELYVQ 4477


>gi|345292929|gb|AEN82956.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292931|gb|AEN82957.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292933|gb|AEN82958.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292937|gb|AEN82960.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292939|gb|AEN82961.1| AT5G12350-like protein, partial [Capsella rubella]
          Length = 169

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNH 472
           +ACG  HS  V+ +G LYT+G GD+G LGHG  ++  VP+RV   +  +HV S++CG  H
Sbjct: 36  VACGEYHSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYH 95

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  +   G+ ++ FGDG +G LG G+
Sbjct: 96  TAVVTSAGQ-LFTFGDGTFGVLGHGD 120



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 42/67 (62%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 87  SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 146

Query: 472 HTVCIAD 478
           HT  + +
Sbjct: 147 HTAAVVE 153



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 431 YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490
           +++G    GRLGHG   N + P+ + AL   ++E V+CG  H+  ++  G  +Y +G G+
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGD-LYTWGKGD 59

Query: 491 YGKLGLGN 498
           +G LG GN
Sbjct: 60  FGILGHGN 67



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 26/45 (57%)

Query: 37 FAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAA 81
          F+WG  S+ +LG G   N + P+L+ AL   NI  V+ G  HS A
Sbjct: 1  FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCA 45


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G  +YG LGHG  ++  VP+RV   L  +HV S+SCG 
Sbjct: 369 VACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGP 428

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 429 WHTAVVTSSGQ-LFTFGDGTFGALGHGD 455



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+AVVTS+G L+TFG+G +G LGHG   +  +P  + +L  +     +CG+ 
Sbjct: 422 SSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVW 481

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   K  P
Sbjct: 482 HTAAVVEVMVGNSSSSNCSSGK-LFTWGDGDKGRLGHGDKESKLVP 526



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG KH+A+VT  G ++++G    GRLGHG   +   P+ + +L+  ++E V+CG  HT
Sbjct: 317 IACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHT 376

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLGN 498
             +   G  +Y +GDG   YG LG GN
Sbjct: 377 CAVTLSGD-LYTWGDGTYNYGLLGHGN 402



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)

Query: 399 VPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P+    +L + +   IACG  H AV+TS   ++T+G G  GRLGHG T +   P  V A
Sbjct: 575 LPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEA 634

Query: 458 LNKVHVESVSCGLNHTVCIA 477
           L    V+S++CG N T  I 
Sbjct: 635 LKDKQVKSIACGTNFTAAIC 654



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 56/93 (60%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNH 472
           +ACG   +  ++ +G++YT G+  YG+LG+ T  + K+P RV   L+K  VE ++CG  H
Sbjct: 539 VACGHSMTVALSRSGHVYTMGSCVYGQLGN-TQADGKLPIRVEGKLSKSFVEEIACGAYH 597

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +  + + V+ +G G  G+LG G+T  + TP
Sbjct: 598 VAVLTSRTE-VFTWGKGANGRLGHGDTNDRNTP 629



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 14/93 (15%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD GRLGHG   +  VP  VV L + +
Sbjct: 477 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPN 536

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            + V+CG + TV ++  G  VY  G   YG+LG
Sbjct: 537 CQ-VACGHSMTVALSRSGH-VYTMGSCVYGQLG 567



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G +H   V+  G+VF+WG  S  +LG G   +   P+L+ +LSN NI  V+ 
Sbjct: 312 LDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVAC 371

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 372 GEYHTCAVT 380



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +VF WG  ++ +LG G+  +   P LV AL +K ++ ++ G 
Sbjct: 588 VEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACGT 647

Query: 77  SHSAA 81
           + +AA
Sbjct: 648 NFTAA 652



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 38/70 (54%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V+++GQ+F +G+ +   LG G++ +   P+ + +L      Q
Sbjct: 416 LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQ 475

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 476 AACGVWHTAA 485


>gi|323452281|gb|EGB08155.1| hypothetical protein AURANDRAFT_26269, partial [Aureococcus
           anophagefferens]
          Length = 369

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 2/88 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           AA+ CG +H+AV+T+ G +YT+G G +GRLGHG   + K P  V  AL  V    V+CG 
Sbjct: 3   AAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACGF 62

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +T  ++ +G A+Y +G GE G+LGLG+
Sbjct: 63  AYTAAVSAQG-ALYTWGAGENGRLGLGD 89



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 9/100 (9%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG------HGTTMNWKVPERVVALNKVHVES 465
           A +ACGF ++A V++ G LYT+G G+ GRLG      HG   +   P  + A     V  
Sbjct: 56  AQVACGFAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVRE 115

Query: 466 VSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
           +S G    HTV +      VY +G    G+LG  N  + P
Sbjct: 116 ISVGPGGYHTVALVSPAD-VYTWGHNRVGQLGYTNNDVVP 154



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCG 469
           A IACG +HS  +T +G +++ G G+ G+LGHG   N + P  V  L  ++  V  V+CG
Sbjct: 240 AQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLKASRRDVLEVACG 299

Query: 470 LNHTVCIA 477
            N T+ + 
Sbjct: 300 NNGTLVLC 307



 Score = 42.0 bits (97), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 11/103 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER----------VVALNKVHV 463
           +  G+ H+A++T+ G  Y  G    G+LG G   ++   ER          +  L    V
Sbjct: 180 VVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRLLDRLGAKRV 239

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             ++CG  H+V + + G+ V++ G G  G+LG GN   +  P+
Sbjct: 240 AQIACGGEHSVALTEDGE-VHSCGAGNKGQLGHGNVDNEQFPR 281



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 14/121 (11%)

Query: 7   RHIPAFKNIHIVDISVG--TEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYR------- 56
           R + AF    + +ISVG    H +A+ +   V+ WG+N   QLG   N +  R       
Sbjct: 103 RPLDAFGGRAVREISVGPGGYHTVALVSPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHF 162

Query: 57  --EPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIP-DHYG 113
              P+ V ++S   +R+V AG  H+A  TA     +  G      L LG P+  P +  G
Sbjct: 163 VPRPRRVDSVSGLRVRRVVAGWGHTALLTAEGA-AYVCGRNFQGQLGLGDPESFPHNERG 221

Query: 114 H 114
           H
Sbjct: 222 H 222


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 571 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 630

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 631 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 664



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 351 YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
           ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 452 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 510

Query: 406 RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                + A+  G +H+  +T +G ++++G GD G+LGH + MN   P  + AL    +  
Sbjct: 511 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 570

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
           ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 571 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 609



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           R I A  +  +  ++V  G  H  A++  G+VF+WG   D +LG  +++N  +P+L+ AL
Sbjct: 504 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 563

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
             K IR ++ G SHSAA T+
Sbjct: 564 KTKRIRDIACGSSHSAALTS 583



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 414 IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 623 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 682

Query: 472 HTVCIADKGKAVYAFGDG 489
            ++ +   G  V+ +G G
Sbjct: 683 FSLALTKSG-VVWTWGKG 699



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++V  L  
Sbjct: 558 RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG 617

Query: 67  KNIRQVSAG 75
             + QV+ G
Sbjct: 618 HRVIQVACG 626


>gi|300121038|emb|CBK21420.2| unnamed protein product [Blastocystis hominis]
          Length = 618

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESVSCGL 470
           A+IACG  H+  + SNG +Y++G G YG+LG G   ++   P ++  L  V ++SVSCG 
Sbjct: 83  ASIACGGFHNVCICSNGSVYSWGGGMYGQLGQGLNVLSSSQPLQIAKLKGVDIQSVSCGQ 142

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGL 496
           NH++ +   G  VYA G+G YG+LGL
Sbjct: 143 NHSLFLGSTG-IVYACGNGFYGQLGL 167



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G  HS  +  NG +  +G+  YG+LG G+ +    P+R+     + V S++CG  H 
Sbjct: 33  IAAGTSHSLCLVDNGEIIAWGSNSYGQLGFGSDVEDSDPQRIPTFQNLPVASIACGGFHN 92

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           VCI   G +VY++G G YG+LG G
Sbjct: 93  VCICSNG-SVYSWGGGMYGQLGQG 115



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 13/162 (8%)

Query: 342 TDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGA--SWTGRITPIVTGGQSV 399
           +D+ED+D    Q +   +++ ++ +    F  +    C  G+  SW G +   +  G +V
Sbjct: 64  SDVEDSD---PQRIPTFQNLPVASIACGGFHNVCI--CSNGSVYSWGGGMYGQLGQGLNV 118

Query: 400 -----PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
                PL  A        +++CG  HS  + S G +Y  GNG YG+LG    ++++ P  
Sbjct: 119 LSSSQPLQIAKLKGVDIQSVSCGQNHSLFLGSTGIVYACGNGFYGQLGLDVGIDYR-PVC 177

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
           V +L+   +  ++CG+ H +  +      YA+G  + G+LG+
Sbjct: 178 VESLSDKMITDITCGMLHCIAYSSITGQAYAWGSNDSGELGI 219



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 1   MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
           +S +    I   K + I  +S G  H L + +TG V+A GN    QLGL   I+YR P  
Sbjct: 119 LSSSQPLQIAKLKGVDIQSVSCGQNHSLFLGSTGIVYACGNGFYGQLGLDVGIDYR-PVC 177

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           V +LS+K I  ++ G  H  A+++
Sbjct: 178 VESLSDKMITDITCGMLHCIAYSS 201



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLALS 65
           + IP F+N+ +  I+ G  H + + + G V++WG     QLG G N ++  +P  +  L 
Sbjct: 72  QRIPTFQNLPVASIACGGFHNVCICSNGSVYSWGGGMYGQLGQGLNVLSSSQPLQIAKLK 131

Query: 66  NKNIRQVSAGRSHS 79
             +I+ VS G++HS
Sbjct: 132 GVDIQSVSCGQNHS 145



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%)

Query: 18 VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
          + I+ GT H L + + G++ AWG+NS  QLG G+ +   +PQ +    N  +  ++ G  
Sbjct: 31 IQIAAGTSHSLCLVDNGEIIAWGSNSYGQLGFGSDVEDSDPQRIPTFQNLPVASIACGGF 90

Query: 78 HSAA 81
          H+  
Sbjct: 91 HNVC 94



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSN-TGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           + +  +  I DI+ G  H +A S+ TGQ +AWG+N   +LG+  Q N  EP  V    N+
Sbjct: 178 VESLSDKMITDITCGMLHCIAYSSITGQAYAWGSNDSGELGINAQDNVVEPHEVFVPCNE 237

Query: 68  NIRQVSAG 75
              Q+  G
Sbjct: 238 KFVQIRGG 245


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P    + LQ      IACG   S  V  NG +Y +G    G+
Sbjct: 194 GYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQ 253

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + V+ V+CG  HT+ + D+G+ +YA+G   YG+LG GN  
Sbjct: 254 LGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQ-IYAWGANSYGQLGTGNKS 312

Query: 501 LKPTP 505
            +  P
Sbjct: 313 NQSYP 317



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 63/94 (67%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G +YT+G  + G++G G+T N  +P RV +   NKV V +++CG  
Sbjct: 174 VACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKV-VVNIACGQM 232

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ VY +G    G+LGLG++G +PTP
Sbjct: 233 CSMAVVENGE-VYVWGYNGNGQLGLGSSGNQPTP 265



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H  + T  G +YT+G+  Y +LG+GTT +  VP +V    +NK  +E V+CG +H++ + 
Sbjct: 127 HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIE-VACGSHHSMVLT 185

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             G+ VY +G    G++G G+T  +P P+
Sbjct: 186 SDGE-VYTWGYNNSGQVGSGSTANQPIPR 213



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  ++ G  H L +++ GQ++AWG NS  QLG GN+ N   
Sbjct: 257 GSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY 316

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V    ++ I   +   +H++A
Sbjct: 317 PTTVTVDKDRVIEIAACHSAHTSA 340



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV   G+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 214 RVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 273

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 274 IRVQRVACGCAHTLVLT 290



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 39/94 (41%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG  H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 259 SGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT 318

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +   VY +G
Sbjct: 319 TVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 352



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQV 72
           N  +++++ G+ H + +++ G+V+ WG N+  Q+G G+  N   P+ V + L NK +  +
Sbjct: 168 NKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNI 227

Query: 73  SAGRSHSAA 81
           + G+  S A
Sbjct: 228 ACGQMCSMA 236



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLALSNKNIRQVSAGRSHSAAWTA 84
           HV+  +  G+V+ WG+N+ +QLG G   +   P Q+   L NK + +V+ G  HS   T+
Sbjct: 127 HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTS 186


>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
          Length = 590

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG  +   MN + P+RV+ + +  V  V+CG  
Sbjct: 233 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGG 291

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 292 HTVVLTE--KVVYAFGLGQFGQLGLG 315



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 136

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 137 TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 167



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 9/88 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
           +ACG  H+ V+T    +Y FG G +G+LG GT    T   K+ ER+      H+   SCG
Sbjct: 286 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHI---SCG 341

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            NHT  + + G  +Y FGDG +GKLGLG
Sbjct: 342 ENHTALMTELG-LLYTFGDGRHGKLGLG 368



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + A
Sbjct: 62  ENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKA 121

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L  + ++  + GR+H+   T
Sbjct: 122 LKPEKVKLAACGRNHTLVST 141



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G LYTFG+G +G+LG G     N   P       +  V+ ++CG  
Sbjct: 338 ISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGC 397

Query: 472 HTVCIA 477
           H +  A
Sbjct: 398 HMLVFA 403



 Score = 45.4 bits (106), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISW--ISCGYYHS 240

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 241 AFVTMDGE-LYTFGEPENGKLGLPN 264



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNK 67
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+  +     Q+V      
Sbjct: 119 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD 178

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 179 TIKQLSAGANTSAALT 194



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL ++ N   P  V     K I  +S G 
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGY 237

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 238 YHSAFVT 244


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 11/103 (10%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ACG  HSA+ T+NG L+TFG+G +G LGHG   +   P+ V  L+ +    V+CG+ H
Sbjct: 1192 SVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTMKVACGVWH 1251

Query: 473  TVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
            TV I +           K ++ +GDG+  +LG GN  T L PT
Sbjct: 1252 TVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPT 1294



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
            +ACG  H+  V+++G L+T+G+G  + G LGHG+ ++  +P+RV   +  + V SV+CG 
Sbjct: 1138 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGT 1197

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             H+      GK ++ FGDG +G LG G+
Sbjct: 1198 WHSALATANGK-LFTFGDGAFGVLGHGD 1224



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 4/79 (5%)

Query: 399  VPLTFANRL--QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
            +P    +RL  ++ E  I+CG  H AV+TS   ++T+G G  GRLGHG   + K P  V 
Sbjct: 1343 LPCLVQDRLVGEFVEE-ISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKEDRKTPTLVE 1401

Query: 457  ALNKVHVESVSCGLNHTVC 475
            AL + HV+S+SC  + +VC
Sbjct: 1402 ALKERHVKSISCA-DQSVC 1419



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            IACG +H A+VT  G ++T+G    GRLGHG  ++   P+ V  L   +++ V+CG  HT
Sbjct: 1086 IACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFVACGEYHT 1145

Query: 474  VCIADKGKAVYAFGDGEY--GKLGLGN 498
              ++  G  ++ +GDG +  G LG G+
Sbjct: 1146 CAVSTSGD-LFTWGDGIHNVGLLGHGS 1171



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 9/111 (8%)

Query: 399  VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP----ER 454
            +P   ++ + Y    IACG   +  +T++G+++T G   +G+LG   + + K+P    +R
Sbjct: 1292 LPTCVSSLIDYNFQQIACGHTLTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLPCLVQDR 1350

Query: 455  VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +V      VE +SCG +H   +  + + V+ +G G  G+LG G+   + TP
Sbjct: 1351 LVG---EFVEEISCGDHHVAVLTSRSE-VFTWGKGSNGRLGHGDKEDRKTP 1397



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 37/64 (57%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            +DI+ G  H+  V+  G+VF WG  +  +LG G Q++   P+LV  L+  NI  V+ G  
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFVACGEY 1143

Query: 78   HSAA 81
            H+ A
Sbjct: 1144 HTCA 1147



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 11/99 (11%)

Query: 414  IACGFKHSAVVT----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            +ACG  H+  +           S+  L+T+G+GD  RLGHG    + +P  V +L   + 
Sbjct: 1245 VACGVWHTVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNF 1304

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
            + ++CG   TV +   G  V+  G   +G+LG  N+  K
Sbjct: 1305 QQIACGHTLTVALTTSGH-VFTMGGTSHGQLGSSNSDGK 1342



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 36/59 (61%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
            + +IS G  HV  +++  +VF WG  S+ +LG G++ + + P LV AL  ++++ +S  
Sbjct: 1356 VEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKEDRKTPTLVEALKERHVKSISCA 1414


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 10/94 (10%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV--------HVE 464
            AIA GF H+ V+  +G LY+FG GD G+LGHG+ ++  +P R + LN +         + 
Sbjct: 1330 AIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTR-IELNTIVGIQHGGGKIT 1388

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             ++CG  H+V  +D G+ VY++G G+ G+LG GN
Sbjct: 1389 QIACGFGHSVICSDNGE-VYSWGLGKQGQLGHGN 1421



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 3/93 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            IACGF HS + + NG +Y++G G  G+LGHG   +   P  + AL    V  +SCG  +T
Sbjct: 1390 IACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKG--VTKISCGHFYT 1447

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +   D  K VY++G GE+ KLG G+   + TP+
Sbjct: 1448 MATTDL-KNVYSWGLGEHMKLGHGSDKNEATPR 1479



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 62/106 (58%), Gaps = 7/106 (6%)

Query: 406  RLQYYEAA-----IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALN 459
            RL+++        + CG +HS  V S+  +Y++G   +G+LGHGT +++   P+ +  ++
Sbjct: 1265 RLEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDIS 1324

Query: 460  KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               +++++ G  HT+ +   G+ +Y+FG G+ G+LG G+   K  P
Sbjct: 1325 GQKIQAIAAGFAHTIVLKKSGE-LYSFGYGDQGQLGHGSFVSKSIP 1369



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 4/87 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN--WKVPERVVALN-KVHVESVSCGL 470
            ++CG+ H A+++ +G L+T+G    G+LGHG  +      P+R+     K  +  V CG 
Sbjct: 1223 VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECGG 1282

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLG 497
             H++C+ D    VY++G  ++G+LG G
Sbjct: 1283 EHSICV-DSDYVVYSWGQDKFGQLGHG 1308



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 36/66 (54%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
              I+CG  ++   T    +Y++G G++ +LGHG+  N   P  V    + +V  + CGLN
Sbjct: 1438 TKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLN 1497

Query: 472  HTVCIA 477
            HT+ + 
Sbjct: 1498 HTITLT 1503



 Score = 45.1 bits (105), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 31/42 (73%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
            I+CG   +A++TSNG LY +G G++G++G+G T +  VP R+
Sbjct: 1602 ISCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAWVPIRI 1643



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 6/75 (8%)

Query: 430  LYTFGNGDYGRLGHGTTM-----NWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVY 484
            +Y  G G++G+LG G  +     +  +P  +  +N +++  +SCG + T  I   G A+Y
Sbjct: 1561 IYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNG-ALY 1619

Query: 485  AFGDGEYGKLGLGNT 499
             +G G +G++G G T
Sbjct: 1620 VWGYGNFGQIGNGKT 1634



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            I  I+ G  H +  S+ G+V++WG     QLG GN  +   P+L+ AL  K + ++S G 
Sbjct: 1387 ITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEAL--KGVTKISCGH 1444

Query: 77   SHSAAWT 83
             ++ A T
Sbjct: 1445 FYTMATT 1451



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I A K +    IS G  + +A ++   V++WG     +LG G+  N   P++V     
Sbjct: 1429 RLIEALKGV--TKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQ 1486

Query: 67   KNIRQVSAGRSHSAAWTAP 85
            KN+ ++  G +H+   T P
Sbjct: 1487 KNVSKIVCGLNHTITLTYP 1505



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ-INYREPQLVLALSNKNIRQVSAG 75
            I+ +  G EH + V +   V++WG +   QLG G + ++   P+++  +S + I+ ++AG
Sbjct: 1275 IIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAG 1334

Query: 76   RSHS 79
             +H+
Sbjct: 1335 FAHT 1338


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P    + LQ      IACG   S  V  NG +Y +G    G+
Sbjct: 152 GYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQ 211

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + VE V CG  HT+ + D+G  +YA+G   YG+LG GN  
Sbjct: 212 LGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEG-VMYAWGANSYGQLGTGNKS 270

Query: 501 LKPTP 505
            +  P
Sbjct: 271 NQSYP 275



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLN 471
           ++ACG  HS V+T +G +Y +G  + G++G G+T N  +P +V + L    V  ++CG  
Sbjct: 131 SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQM 190

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VYA+G    G+LGLG++G +PTP
Sbjct: 191 SSMAVVDNGE-VYAWGYNGNGQLGLGSSGNQPTP 223



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 4/89 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H  +VTS+G +Y++G+  Y +LG+G+T     P +V    +NK  + SV+CG +H++ + 
Sbjct: 85  HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAI-SVACGSHHSMVLT 143

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             G+ VYA+G    G++G G+T  +P P+
Sbjct: 144 CDGE-VYAWGYNNSGQVGSGSTANQPIPR 171



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
             +N  ++ I+ G    +AV + G+V+AWG N + QLGLG+  N   P  + AL    + 
Sbjct: 176 CLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVE 235

Query: 71  QVSAGRSHSAAWT 83
           QV  G +H+ A T
Sbjct: 236 QVVCGYAHTLALT 248



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         + CG+ H+  +T  G +Y +G   YG+LG G   N   P 
Sbjct: 217 SGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPV 276

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +V+   +  VE  +C  +HT     +   VY +G
Sbjct: 277 QVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  +  G  H LA+++ G ++AWG NS  QLG GN+ N   
Sbjct: 215 GSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSY 274

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+    + +   +   SH++A
Sbjct: 275 PVQVIVDKERIVEIAACHSSHTSA 298



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R I       IV +S G+  HV+ V++ G+V++WG+N+ +QLG G+      P Q+   L
Sbjct: 65  RRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNL 124

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
            NK    V+ G  HS   T 
Sbjct: 125 INKKAISVACGSHHSMVLTC 144



 Score = 42.0 bits (97), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQV 72
           N   + ++ G+ H + ++  G+V+AWG N+  Q+G G+  N   P+ V + L NK +  +
Sbjct: 126 NKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGI 185

Query: 73  SAGRSHSAA 81
           + G+  S A
Sbjct: 186 ACGQMSSMA 194


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P    + LQ      IACG   S  V  NG +Y +G    G+
Sbjct: 152 GYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQ 211

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + VE V CG  HT+ + D+G  +YA+G   YG+LG GN  
Sbjct: 212 LGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEG-VMYAWGANSYGQLGTGNKS 270

Query: 501 LKPTP 505
            +  P
Sbjct: 271 NQSYP 275



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLN 471
           ++ACG  HS V+T +G +Y +G  + G++G G+T N  +P +V + L    V  ++CG  
Sbjct: 131 SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQM 190

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VYA+G    G+LGLG++G +PTP
Sbjct: 191 SSMAVVDNGE-VYAWGYNGNGQLGLGSSGNQPTP 223



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 4/89 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H  +VTS+G +Y++G+  Y +LG+G+T     P +V    +NK  + SV+CG +H++ + 
Sbjct: 85  HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAI-SVACGSHHSMVLT 143

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             G+ VYA+G    G++G G+T  +P P+
Sbjct: 144 CDGE-VYAWGYNNSGQVGSGSTANQPIPR 171



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
             +N  ++ I+ G    +AV + G+V+AWG N + QLGLG+  N   P  + AL    + 
Sbjct: 176 CLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVE 235

Query: 71  QVSAGRSHSAAWT 83
           QV  G +H+ A T
Sbjct: 236 QVVCGYAHTLALT 248



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         + CG+ H+  +T  G +Y +G   YG+LG G   N   P 
Sbjct: 217 SGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPV 276

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +V+   +  VE  +C  +HT     +   VY +G
Sbjct: 277 QVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  +  G  H LA+++ G ++AWG NS  QLG GN+ N   
Sbjct: 215 GSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSY 274

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+    + +   +   SH++A
Sbjct: 275 PVQVIVDKERIVEIAACHSSHTSA 298



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R I       IV +S G+  HV+ V++ G+V++WG+N+ +QLG G+      P Q+   L
Sbjct: 65  RRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNL 124

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
            NK    V+ G  HS   T 
Sbjct: 125 INKKAISVACGSHHSMVLTC 144



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQV 72
           N   + ++ G+ H + ++  G+V+AWG N+  Q+G G+  N   P+ V + L NK +  +
Sbjct: 126 NKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGI 185

Query: 73  SAGRSHSAA 81
           + G+  S A
Sbjct: 186 ACGQMSSMA 194


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P    + LQ      IACG   S  V  NG +Y +G    G+
Sbjct: 152 GYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQ 211

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + VE V CG  HT+ + D+G  +YA+G   YG+LG GN  
Sbjct: 212 LGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEG-VMYAWGANSYGQLGTGNKS 270

Query: 501 LKPTP 505
            +  P
Sbjct: 271 NQSYP 275



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLN 471
           ++ACG  HS V+T +G +Y +G  + G++G G+T N  +P +V + L    V  ++CG  
Sbjct: 131 SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQM 190

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VYA+G    G+LGLG++G +PTP
Sbjct: 191 SSMAVVDNGE-VYAWGYNGNGQLGLGSSGNQPTP 223



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 4/89 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H  +VTS+G +Y++G+  Y +LG+G+T     P +V    +NK    SV+CG +H++ + 
Sbjct: 85  HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINK-KAHSVACGSHHSMVLT 143

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             G+ VYA+G    G++G G+T  +P P+
Sbjct: 144 CDGE-VYAWGYNNSGQVGSGSTANQPIPR 171



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
             +N  ++ I+ G    +AV + G+V+AWG N + QLGLG+  N   P  + AL    + 
Sbjct: 176 CLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVE 235

Query: 71  QVSAGRSHSAAWT 83
           QV  G +H+ A T
Sbjct: 236 QVVCGYAHTLALT 248



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         + CG+ H+  +T  G +Y +G   YG+LG G   N   P 
Sbjct: 217 SGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPV 276

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +V+   +  VE  +C  +HT     +   VY +G
Sbjct: 277 QVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  +  G  H LA+++ G ++AWG NS  QLG GN+ N   
Sbjct: 215 GSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSY 274

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+    + +   +   SH++A
Sbjct: 275 PVQVIVDKERIVEIAACHSSHTSA 298



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R I       IV +S G+  HV+ V++ G+V++WG+N+ +QLG G+      P Q+   L
Sbjct: 65  RRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNL 124

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
            NK    V+ G  HS   T 
Sbjct: 125 INKKAHSVACGSHHSMVLTC 144



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQVSAGRSH 78
           ++ G+ H + ++  G+V+AWG N+  Q+G G+  N   P+ V + L NK +  ++ G+  
Sbjct: 132 VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMS 191

Query: 79  SAA 81
           S A
Sbjct: 192 SMA 194


>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 1035

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 59/86 (68%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LYTFG  + G+LG  +   +N + P+RV+ +    ++ V+CG  
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGG 291

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 292 HTVVLTE--KVVYAFGLGQFGQLGLG 315



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNH 136

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 137 TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 167



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +Y FG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 286 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENH 344

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  + D G  +Y FGDG +GKLGLG
Sbjct: 345 TALMTDIG-LMYTFGDGRHGKLGLG 368



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISW--ISCGYYHS 240

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 241 AFVTTDGE-LYTFGEPENGKLGLPN 264



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N   P       K  V+ ++CG  
Sbjct: 338 ISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGC 397

Query: 472 HTVCIA 477
           H +  A
Sbjct: 398 HMLVFA 403



 Score = 45.1 bits (105), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + 
Sbjct: 61  AENIPSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIK 120

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++  + GR+H+   T
Sbjct: 121 ALKPEKVKLAACGRNHTLVST 141



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ--INYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ  IN+R PQ VL + +K I QV+ G  
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVI-QVACGGG 291

Query: 78  HSAAWT 83
           H+   T
Sbjct: 292 HTVVLT 297



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 15/83 (18%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN--------QINYREPQL 60
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+        QI +  P  
Sbjct: 119 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSD 178

Query: 61  VLALSNKNIRQVSAGRSHSAAWT 83
           +       I+Q+SAG + SAA T
Sbjct: 179 I-------IKQLSAGANTSAALT 194



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL N+ N   P  V     K I  +S G 
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCGY 237

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 238 YHSAFVT 244


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 13/121 (10%)

Query: 399 VPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P      LQ  Y + +ACG  H+AVV S+G L+TFG+G +G LGHG   +  VP  V  
Sbjct: 383 IPKRVTGALQGLYVSYVACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKI 442

Query: 458 LNKVHVESVSCGLNHTVCI---------ADKGKA---VYAFGDGEYGKLGLGNTGLKPTP 505
           L+ + V  V+CG+ HT  +         A+ G +   V+ +GDGE G+LG G+   +  P
Sbjct: 443 LSGLIVTKVACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLP 502

Query: 506 Q 506
           +
Sbjct: 503 E 503



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 4/89 (4%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYG--RLGHGTTMNWKVPERVV-ALNKVHVESVSCG 469
           ++ACG  H+  +T +G LY++G+G +    LGHG   +  +P+RV  AL  ++V  V+CG
Sbjct: 343 SLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACG 402

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             HT  +A  G+ ++ FGDG +G LG G+
Sbjct: 403 PWHTAVVASSGQ-LFTFGDGSFGALGHGD 430



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 39/64 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   +YT+G G  G+LGHGT  N + P  V  L +  V++++CG N T
Sbjct: 568 IACGSYHVAVLTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAITCGSNFT 627

Query: 474 VCIA 477
             I 
Sbjct: 628 AVIC 631



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 14/95 (14%)

Query: 414 IACGFKHSAVV-------------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           +ACG  H+A +             +S G ++T+G+G+ G+LGHG      +PE V++L+ 
Sbjct: 451 VACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSN 510

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            ++  V+CG + TV +   G  VY  G   YG+LG
Sbjct: 511 ENICQVACGHSLTVSLTSTGH-VYTMGSTAYGQLG 544



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNH 472
           +ACG   +  +TS G++YT G+  YG+LG+ T      P RV   + +  VE ++CG  H
Sbjct: 516 VACGHSLTVSLTSTGHVYTMGSTAYGQLGNPTAKG-NFPARVEGDIVEASVEEIACGSYH 574

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +  K + +Y +G G  G+LG G    K  P
Sbjct: 575 VAVLTSKSE-IYTWGKGLNGQLGHGTIENKREP 606



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 39/68 (57%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V+++         S+ GQVF WG+    QLG G+      P+ V++LSN+NI QV+ G 
Sbjct: 461 LVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSNENICQVACGH 520

Query: 77  SHSAAWTA 84
           S + + T+
Sbjct: 521 SLTVSLTS 528



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 37/64 (57%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G+ HV  +++  +++ WG   + QLG G   N REP +V  L  K ++ ++ G 
Sbjct: 565 VEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAITCGS 624

Query: 77  SHSA 80
           + +A
Sbjct: 625 NFTA 628


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 6/102 (5%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           Y  AI+CG  H+A VTS G L+TFG+G +G LGHG  ++  +P  V ALN       +CG
Sbjct: 407 YVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACG 466

Query: 470 LNHTVCI------ADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + H+  +      A     ++ +GDG+ G+LG G+   +  P
Sbjct: 467 VWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIP 508



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 6/87 (6%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDY--GRLGHGT-TMNWKVPERVVA-LNKVHVESVSCGLN 471
           CG  H+  VT++G LY +G+GD+  G LG G+   +WK P R++  +  ++V+++SCG  
Sbjct: 358 CGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWK-PVRILGQMEGIYVKAISCGPW 416

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           HT  +  +GK ++ FGDG +G LG G+
Sbjct: 417 HTAFVTSEGK-LFTFGDGTFGALGHGD 442



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 3/102 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P    + +     +I+CG  ++ +VT  G +Y++G    GRLGHG       P+ +   
Sbjct: 289 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEF 348

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEY--GKLGLGN 498
           N   VE   CG  HT  +   G  +YA+GDG++  G LGLG+
Sbjct: 349 NGSTVELADCGEFHTCAVTASGD-LYAWGDGDHNAGLLGLGS 389



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 8/83 (9%)

Query: 415 ACGFKHSAVV-------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           ACG  HSA V       TS+G L+T+G+GD GRLGHG      +P  V  L+    + V+
Sbjct: 464 ACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVA 523

Query: 468 CGLNHTVCIADKGKAVYAFGDGE 490
           CG + TV ++  G+ VYA G  +
Sbjct: 524 CGQSITVALSMSGQ-VYAMGTAD 545



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 36/64 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACGF H AV+ S   +YT+G G  G+LGHG T    +P  V AL    V  V CG N+T
Sbjct: 569 VACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYT 628

Query: 474 VCIA 477
             I 
Sbjct: 629 ATIC 632



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 37/64 (57%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +++ G  H+  +++  +V+ WG  S+ QLG G+      P LV AL  K +R+V  G 
Sbjct: 566 VQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGS 625

Query: 77  SHSA 80
           +++A
Sbjct: 626 NYTA 629



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 32/65 (49%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           IS GT + + V+  GQ+++WG  S  +LG G       P+L+   +   +     G  H+
Sbjct: 304 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHT 363

Query: 80  AAWTA 84
            A TA
Sbjct: 364 CAVTA 368


>gi|145349911|ref|XP_001419370.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579601|gb|ABO97663.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 212

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 1/86 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           + A G  H+ + T +G +YTFG GD G+LGHG  +N+  P+ V ++  ++V SV+CG NH
Sbjct: 57  SCAAGSAHTVITTGSGQVYTFGVGDCGQLGHGDGVNYAKPKLVESVTLMNVSSVACGSNH 116

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T+ + D G  VY FG    G+LG G+
Sbjct: 117 TLVVTDSGY-VYGFGSNSCGQLGCGD 141



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN-KVHVESVSCGL 470
           +++ACG  H+ VVT +GY+Y FG+   G+LG G   N  +P R+        V  V  G 
Sbjct: 108 SSVACGSNHTLVVTDSGYVYGFGSNSCGQLGCGDFSNIFIPRRMGHDEFVGGVVQVVGGE 167

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            HTV + +KG+ VY  G G  G+LGL +T
Sbjct: 168 EHTVMLTEKGR-VYVCGRGSDGQLGLSDT 195



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 39/63 (61%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V  + G+ H +  + +GQV+ +G     QLG G+ +NY +P+LV +++  N+  V+ G 
Sbjct: 55  VVSCAAGSAHTVITTGSGQVYTFGVGDCGQLGHGDGVNYAKPKLVESVTLMNVSSVACGS 114

Query: 77  SHS 79
           +H+
Sbjct: 115 NHT 117


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 6/102 (5%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           Y  AI+CG  H+A VTS G L+TFG+G +G LGHG  ++  +P  V ALN       +CG
Sbjct: 404 YVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACG 463

Query: 470 LNHTVCI------ADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + H+  +      A     ++ +GDG+ G+LG G+   +  P
Sbjct: 464 VWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIP 505



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 6/87 (6%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDY--GRLGHGT-TMNWKVPERVVA-LNKVHVESVSCGLN 471
           CG  H+  VT++G LY +G+GD+  G LG G+   +WK P R++  +  ++V+++SCG  
Sbjct: 355 CGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWK-PVRILGQMEGIYVKAISCGPW 413

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           HT  +  +GK ++ FGDG +G LG G+
Sbjct: 414 HTAFVTSEGK-LFTFGDGTFGALGHGD 439



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 3/102 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P    + +     +I+CG  ++ +VT  G +Y++G    GRLGHG       P+ +   
Sbjct: 286 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEF 345

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEY--GKLGLGN 498
           N   VE   CG  HT  +   G  +YA+GDG++  G LGLG+
Sbjct: 346 NGSTVELADCGEFHTCAVTASGD-LYAWGDGDHNAGLLGLGS 386



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 8/83 (9%)

Query: 415 ACGFKHSAVV-------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           ACG  HSA V       TS+G L+T+G+GD GRLGHG      +P  V  L+    + V+
Sbjct: 461 ACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVA 520

Query: 468 CGLNHTVCIADKGKAVYAFGDGE 490
           CG + TV ++  G+ VYA G  +
Sbjct: 521 CGQSITVALSMSGQ-VYAMGTAD 542



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 36/64 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACGF H AV+ S   +YT+G G  G+LGHG T    +P  V AL    V  V CG N+T
Sbjct: 566 VACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYT 625

Query: 474 VCIA 477
             I 
Sbjct: 626 ATIC 629



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 37/64 (57%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +++ G  H+  +++  +V+ WG  S+ QLG G+      P LV AL  K +R+V  G 
Sbjct: 563 VQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGS 622

Query: 77  SHSA 80
           +++A
Sbjct: 623 NYTA 626



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 32/65 (49%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           IS GT + + V+  GQ+++WG  S  +LG G       P+L+   +   +     G  H+
Sbjct: 301 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHT 360

Query: 80  AAWTA 84
            A TA
Sbjct: 361 CAVTA 365


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           ACG  H+AV+T +G ++TFG+G YG+LGH +  N   P  V  L    V  ++CG  HT+
Sbjct: 234 ACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTL 293

Query: 475 CIADKGKAVYAFGDGEYGKLG 495
            + D  K VY+FG  E+G+LG
Sbjct: 294 VLTDHMK-VYSFGCNEHGQLG 313



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ--INYREPQLVLAL 64
           R + A   I +  ++ G++H + +S  GQV+ WG NS  QLGLG +   +   PQ V +L
Sbjct: 114 RSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSL 173

Query: 65  SNKNIRQVSAGRSHSAA 81
           S+  + QVSAG  HS A
Sbjct: 174 SSMPVVQVSAGGDHSFA 190



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT--TMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG +H+ V++ +G +YT+G    G+LG G     +   P+ V +L+ + V  VS G +
Sbjct: 127 VACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGD 186

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H+  ++  G +V+ +G  + G+LGLG+T  + TP
Sbjct: 187 HSFALSVSG-SVFGWGRNDCGQLGLGDTTDRETP 219



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S +S + + +  ++ +V +S G +H  A+S +G VF WG N   QLGLG+  +   P LV
Sbjct: 163 SISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLV 222

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L+ K     + G+ H+A  T
Sbjct: 223 HYLNMKKTVFAACGKDHTAVLT 244



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G  HS  ++ +G ++ +G  D G+LG G T + + P  V  LN       +CG +HT
Sbjct: 181 VSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHT 240

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
             +   G  V+ FG G YG+LG
Sbjct: 241 AVLTMDG-TVFTFGSGHYGQLG 261



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 452 PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           P  + AL+ + V  V+CG  HTV ++  G+ VY +G    G+LGLG  G
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQ-VYTWGQNSRGQLGLGKEG 160


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  H+  +T+NG +++FG G +G LGHG  +N  VP  V AL  V V  ++ G NH
Sbjct: 338 SVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDALWGVGVAQIAAGDNH 397

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTG--LKPTP 505
           +  ++  G+ VY +G G+YG LG  +     +PTP
Sbjct: 398 SASLSASGR-VYTWGRGKYGALGHRDVDNRSRPTP 431



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK--VHVESVSCG 469
           A IA G  HSA ++++G +YT+G G YG LGH    N   P  V AL+   V  E ++CG
Sbjct: 389 AQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACG 448

Query: 470 LNHTVCIADKGKAV-YAFGDGEYGKLGLGNTGLKPTP 505
            +HT+ IA  G  V  A+G G  G  G G T    TP
Sbjct: 449 GDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTP 485



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 17/103 (16%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG----------------TTMNWKVPERV 455
           A +ACG +H A VT++G L ++GN ++G+LG G                   +  +  R+
Sbjct: 269 ATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRL 328

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           V    V   SV+CG  HT+ +   G+ V++FG G +G LG G+
Sbjct: 329 VGSGHVKFTSVACGAGHTLALTANGR-VFSFGRGAFGALGHGD 370



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 44/71 (61%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           ++    ++ G  H LA++  G+VF++G  +   LG G+++N   P+LV AL    + Q++
Sbjct: 333 HVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDALWGVGVAQIA 392

Query: 74  AGRSHSAAWTA 84
           AG +HSA+ +A
Sbjct: 393 AGDNHSASLSA 403



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 13/196 (6%)

Query: 228  SDLRLPSR-AWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVAD----- 281
            +DL+ P R  +K   + E   D GGV  +    M  E+   A   +  + +G  D     
Sbjct: 995  ADLKKPLRIKFKSDGVEEEGVDEGGVTKEFFQLMVREMFKDARTFVEFSEHGSEDKNSSL 1054

Query: 282  -----TGYNRDRY-ILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIV 335
                 T     RY   NP  S S +SL  F+  G   G+AI     L + L P+ ++ + 
Sbjct: 1055 APPMFTLDEESRYHWFNPAASVSAESLARFRLFGAALGLAIYNGVCLDVHLPPVAYRRLC 1114

Query: 336  QEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTG 395
                T  DL +      + L+ + D     + E  + + + +E F+  +     T +  G
Sbjct: 1115 GMEPTLVDLCELSPSLGEGLQTLLDYDGDDIEEVFYRDFV-VERFDAETGRTLTTELKPG 1173

Query: 396  GQSVPLTFANRLQYYE 411
            G+   +T  NR ++ +
Sbjct: 1174 GEHTAVTGGNRKEFVK 1189



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 7/90 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGN--GDYGRLGHGTTMNWKV---PERVVALNKV-HVESVS 467
           +A G +HS  VTS G +Y FG+  G+   L   T +   V   PE     N +  V +V+
Sbjct: 213 VAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVATVA 272

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           CG  H   +   G  + ++G+ E+G+LG G
Sbjct: 273 CGQRHCAAVTTSG-VLLSWGNEEFGQLGQG 301



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + A   + +  I+ G  H  ++S +G+V+ WG      LG  +  N   P  V AL +
Sbjct: 378 RLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDD 437

Query: 67  KNIR--QVSAGRSHSAA 81
             +R  Q++ G  H+ A
Sbjct: 438 AGVRCEQIACGGDHTLA 454



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 14  NIHIVDISVGTEHVLAVSN--TGQVFAWGNNSDAQLGLGNQINYREPQLV--LALSNKNI 69
            +    I+ G +H LA++   +G + AWG  S    G G   +   P ++    L ++ +
Sbjct: 439 GVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKV 498

Query: 70  RQVSAGRSHSAAWT 83
            Q+SAG  HS A T
Sbjct: 499 FQISAGSKHSVAVT 512


>gi|428176806|gb|EKX45689.1| hypothetical protein GUITHDRAFT_71210 [Guillardia theta CCMP2712]
          Length = 313

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 3/155 (1%)

Query: 257 ITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAI 316
           ++ +C +L S  +PL ++  N V+  G NRD+++  P  S S + L  F F+G L GVA+
Sbjct: 1   MSALCTDLQSPQLPLFIKCANAVSGIGDNRDKFVPRPSAS-SPELLDMFFFIGQLMGVAM 59

Query: 317 RTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIP 376
           RT+  L L    LVWK ++   +   DL+  D     SL+  RD     +    F E+  
Sbjct: 60  RTQNLLSLDFPSLVWKSLIGIELDEEDLKATDYSCWSSLQ-FRDEDGQAIGANKFEELFQ 118

Query: 377 LECFEGASWTGRITPIVTGGQSVPLTFANRLQYYE 411
              F      G+  P+  GG+   +TF  R +Y E
Sbjct: 119 Y-TFMTVLTDGKCVPLFEGGEETRVTFERRHEYAE 152


>gi|194733732|ref|NP_001070627.2| HECT domain containing 3 [Danio rerio]
          Length = 854

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 37/255 (14%)

Query: 168 RPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKG 227
           +P F PR+Y       + + + +     P++ V    T     +  ++  +       K 
Sbjct: 462 KPNFMPRLY-------INRRLAMEHRDNPTLDV----TCKNAVLTQVYEGLKPSDKYEKT 510

Query: 228 SDLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNG 278
            D R  +R    W+ K + EG  D GG F D++ +M  EL   +      +P   RT N 
Sbjct: 511 LDYRWSARYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSSECPLPLPFFTRTSNQ 570

Query: 279 VADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEP 338
            A  G  RD Y+ NP    S +    F+++G L G A+R K  L L L  LVWK ++ E 
Sbjct: 571 GA--GEARDFYVPNP----SCREFNKFEWIGQLMGAALRGKDFLVLALPGLVWKQLIGEA 624

Query: 339 VTFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII---PLECFEGASWTGRITPIVT 394
           V++T D    D++  + L A+  +           E++   PL         GR+  ++ 
Sbjct: 625 VSWTKDFPAVDSVLVKLLEAMDHMDKETFDFKFGQELVYTTPLS-------DGRLVELIP 677

Query: 395 GGQSVPLTFANRLQY 409
           GG  V + + +R+++
Sbjct: 678 GGSGVVVRYEDRVEF 692


>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
           davidii]
          Length = 1369

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG +H+AV+T N  LY FG  D+G+LG G+      P  V AL    V+ V+CG NHT
Sbjct: 34  LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHT 93

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 94  L-VSTEGGKVYAVGGNNEGQLGLGDTEDRNT 123



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 5/88 (5%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCG 469
           A I+CG+ HSA VT  G LYTFG  ++G+LG      MN KVP+ V  + +  ++ V+CG
Sbjct: 187 AWISCGYYHSAFVTMEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEKVIQ-VACG 245

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
             HTV + +  KAVY FG G++G+LGLG
Sbjct: 246 GGHTVVLTE--KAVYNFGLGQFGQLGLG 271



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLNH 472
           +ACG  H+ V+T    +Y FG G +G+LG GT +      +++   K H +  +SCG NH
Sbjct: 242 VACGGGHTVVLTEKA-VYNFGLGQFGQLGLGTFVFETTEPKIMESVKDHKITYISCGENH 300

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G+ +Y FGDG YGKLGLG
Sbjct: 301 TALITDIGR-MYTFGDGRYGKLGLG 324



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G YG+LG G     N  VP       +  V  V+CG  
Sbjct: 294 ISCGENHTALITDIGRMYTFGDGRYGKLGLGMENFTNQFVPTLCPNFLRFKVHLVACGGC 353

Query: 472 HTVCIA 477
           H V  A
Sbjct: 354 HMVVFA 359



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 39/72 (54%)

Query: 12 FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
          FKN     ++ G EH   ++   +++ +G N   QLGLG++    +P  V AL  + ++ 
Sbjct: 26 FKNDIPTFLACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKH 85

Query: 72 VSAGRSHSAAWT 83
          V+ GR+H+   T
Sbjct: 86 VACGRNHTLVST 97



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +  ++ G  H L  +  G+V+A G N++ QLGLG+  +     L+    S  
Sbjct: 75  VKALKPEKVKHVACGRNHTLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQH 134

Query: 68  NIRQVSAGRSHSAAWT 83
             +Q+SAG + SAA T
Sbjct: 135 QFKQLSAGSNTSAALT 150



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           +S G+    A++  G++F WG NS+ Q+GL N  N   P  V     K I  +S G  HS
Sbjct: 139 LSAGSNTSAALTEDGKLFMWGENSEGQIGLNNVCNVYFPHEVTV--GKPIAWISCGYYHS 196

Query: 80  AAWT 83
           A  T
Sbjct: 197 AFVT 200


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 58/110 (52%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           +S P    N        IACG  H+A++T++G ++ FG G  G+LGHG+  N   P +V+
Sbjct: 575 KSYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVI 634

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            L    +  V+CG +HT+ +      +YAFG G +G+LG         PQ
Sbjct: 635 DLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQ 684



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 58/110 (52%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           ++ P    N        IACG  H+A++T++G ++ FG G  G+LGHG+  N   P +V+
Sbjct: 235 KAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVI 294

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            L    +  V+CG +HT+ +      +YAFG G +G+LG         PQ
Sbjct: 295 DLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQ 344



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 16/134 (11%)

Query: 382 GASWTGRITPIVTGGQS-------VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFG 434
           G+S  G++   +TGGQ+       V      R+Q    +I+CG  H+ +V  +G LY  G
Sbjct: 7   GSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQ----SISCGKHHTGIVLDDGTLYMCG 62

Query: 435 NGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL 494
               G+LG     N   P +V AL  V ++ V+CG +HT+ ++D+G+ V  +G  + G+ 
Sbjct: 63  ANSKGQLGQ--DRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQ-VLGWGRNDRGQC 119

Query: 495 GL--GNTGLKPTPQ 506
           GL  G+   KP P+
Sbjct: 120 GLATGDIENKPRPR 133



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT--TMNWKVPERVVA 457
           P    +   Y    + CG  HS  +T +G L+++G+  YG+LG GT  T     P  + +
Sbjct: 132 PRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTS 191

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L  V +  V+CG  H+  +   G +V+ +G  + G+LGLGN   K  P
Sbjct: 192 LRGVPLVRVACGGFHSFALTISG-SVFGWGKNDVGQLGLGNKENKAYP 238



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 45/76 (59%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + + + +V ++ G  H  A++ +G VF WG N   QLGLGN+ N   P L+  + ++ 
Sbjct: 529 LTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQM 588

Query: 69  IRQVSAGRSHSAAWTA 84
           ++ ++ G+ H+A  TA
Sbjct: 589 VKHIACGQDHTAMLTA 604



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 3/99 (3%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT--TMNWKVPERVVALNKVHVESV 466
           Y    + CG  HS  +T +G L+++G+  YG+LG GT  T     P  + +L  V +  V
Sbjct: 481 YQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRV 540

Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +CG  H+  +   G +V+ +G  + G+LGLGN   K  P
Sbjct: 541 ACGGFHSFALTISG-SVFGWGKNDVGQLGLGNKENKSYP 578



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 45/76 (59%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + + + +V ++ G  H  A++ +G VF WG N   QLGLGN+ N   P L+  + ++ 
Sbjct: 189 LTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQM 248

Query: 69  IRQVSAGRSHSAAWTA 84
           ++ ++ G+ H+A  TA
Sbjct: 249 VKHIACGQDHTAMLTA 264



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +T +G ++ +G  D G+LG G   N   P  +  +    V+ ++CG +HT
Sbjct: 540 VACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHT 599

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +   G  V+ FG G  G+LG G+   +  P+
Sbjct: 600 AMLTADG-GVFLFGQGSEGQLGHGSNYNEVNPR 631



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +T +G ++ +G  D G+LG G   N   P  +  +    V+ ++CG +HT
Sbjct: 200 VACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHT 259

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +   G  V+ FG G  G+LG G+   +  P+
Sbjct: 260 AMLTADG-GVFLFGQGSEGQLGHGSNYNEVNPR 291



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL--GNQINYREPQLVLALS 65
            + A + + I  ++ G +H LAVS+ GQV  WG N   Q GL  G+  N   P+++  L+
Sbjct: 80  QVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLA 139

Query: 66  NKNIRQVSAGRSHSAAWT 83
           +    +V  G  HS A T
Sbjct: 140 SYQFVKVCCGSLHSMALT 157



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 20/212 (9%)

Query: 203  LTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCG 262
            +  + K  V     QISR       +D + P    KV  +GE A DAGGV  +    +  
Sbjct: 1044 MCIQRKNIVPSTINQISR----CHPADFKKP---LKVGFVGEDAVDAGGVRKEFFMLIMR 1096

Query: 263  ELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPL 322
            E+L     +  R         +N          S+S +  + F+ +G++ G+AI     +
Sbjct: 1097 EILDPKYGMF-RFYEDSGKIWFN----------SKSFEDPIMFRLVGLVCGLAIYNHIII 1145

Query: 323  PLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEG 382
             LP    ++K ++    T  DL   +   A  L+A+ D          FP +  ++  E 
Sbjct: 1146 SLPFPLALYKKLLGRKTTLEDLSKLEPQVAHHLQALLDYEDGEGFRDAFPLVFQID--ED 1203

Query: 383  ASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
                 + T ++  G    +T  NR +Y +A +
Sbjct: 1204 NFGHVQTTDLIPNGGDKEVTAKNRQEYIDAYV 1235



 Score = 45.4 bits (106), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 5/79 (6%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYRE-PQLVLAL 64
           RH+ +++    V +  G+ H +A++  G++F+WG+N+  QLG+G  + NY + P  + +L
Sbjct: 476 RHLASYQ---FVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSL 532

Query: 65  SNKNIRQVSAGRSHSAAWT 83
               + +V+ G  HS A T
Sbjct: 533 RGVPLVRVACGGFHSFALT 551



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL--GNQINYREPQLVLALSNKNI 69
            + + I  ++ G +H LAVS+  QV  WG N   Q GL  G+  N   P+++  L++   
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQF 483

Query: 70  RQVSAGRSHSAAWT 83
            +V  G  HS A T
Sbjct: 484 VKVCCGSLHSMALT 497



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 5/79 (6%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYRE-PQLVLAL 64
           +H+ +++    V +  G+ H +A++  G++F+WG+N+  QLG+G  + NY + P  + +L
Sbjct: 136 KHLASYQ---FVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSL 192

Query: 65  SNKNIRQVSAGRSHSAAWT 83
               + +V+ G  HS A T
Sbjct: 193 RGVPLVRVACGGFHSFALT 211


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           IACG  H+  +T+ G LYT+G+G +  G LGHG+ ++  +P+RV   L  + V +VSCG 
Sbjct: 343 IACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGT 402

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   GK +Y FGDG +G LG GN
Sbjct: 403 WHTALITSSGK-LYTFGDGTFGVLGHGN 429



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 12/104 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +A++CG  H+A++TS+G LYTFG+G +G LGHG       P+ V +L  +   SVSCG+ 
Sbjct: 396 SAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVW 455

Query: 472 HTVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           HT  + +          GK ++ +GDG+  +LG G+  + LKPT
Sbjct: 456 HTAAVVEVIMAQSNTSSGK-LFTWGDGDKYRLGHGDRSSKLKPT 498



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG KH+A+VT    ++T+G    GRLGHG   +   P  V +L+  +VE+++CG  HT
Sbjct: 291 VACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHT 350

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             I   G  +Y +GDG +  G LG G+
Sbjct: 351 CAITATGD-LYTWGDGTHNAGLLGHGS 376



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 33/58 (56%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           H AV+T +G +YT+G G  GRLGHG   + K P  V AL    V+ ++CG   T  I 
Sbjct: 569 HVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAIC 626



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 413 AIACGFKHSAVV---------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +++CG  H+A V         TS+G L+T+G+GD  RLGHG   +   P  V +L   + 
Sbjct: 449 SVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNF 508

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               CG   T+ +   G  ++  G   YG+LG
Sbjct: 509 HKAVCGHTLTIGLTTSGH-IFTAGSSVYGQLG 539



 Score = 45.1 bits (105), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G +H   V+   +VF WG     +LG G   +  +P+LV +LS  N+  ++ G  H+
Sbjct: 291 VACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHT 350

Query: 80  AAWTA 84
            A TA
Sbjct: 351 CAITA 355



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 36/56 (64%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAA 81
           HV  ++ +G+V+ WG  ++ +LG G+  + + P  V AL ++++++++ G   +AA
Sbjct: 569 HVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAA 624


>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Monodelphis domestica]
          Length = 1170

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++CG +H+A++T N  LY FG+ ++G+LG G+      P  V AL    V+  +CG N
Sbjct: 38  AYLSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRN 97

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT+   ++GK VYA G    G+LGLG+T  + T Q
Sbjct: 98  HTLVYTEEGK-VYAAGGNSEGQLGLGDTEERTTFQ 131



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+  +T    +YTFG G +G+LG GT       P+ V  L    ++ ++CG NH
Sbjct: 248 VACGGGHTVALTEE-EVYTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I+D G  +Y FGDG +GKLGLG
Sbjct: 307 TALISDTGH-MYTFGDGRHGKLGLG 330



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT+ G LYTFG  + G+LG       N ++P+ V+ +    V  V+CG  
Sbjct: 195 ISCGYYHSAFVTTEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLGI-PGKVNQVACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  + VY FG G++G+LGLG
Sbjct: 254 HTVALTE--EEVYTFGLGQFGQLGLG 277



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 6/74 (8%)

Query: 406 RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHV 463
           ++QY    IACG  H+A+++  G++YTFG+G +G+LG G     N  VP       K  V
Sbjct: 296 KIQY----IACGENHTALISDTGHMYTFGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIV 351

Query: 464 ESVSCGLNHTVCIA 477
             V+CG  H +  A
Sbjct: 352 RLVACGGCHMLVFA 365



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 3/95 (3%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           Q+    ++ G   SA +T +G L+ +G+   G++G     N  VP  V     +    +S
Sbjct: 139 QHKIKQLSAGSNTSAALTEDGVLFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISW--IS 196

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           CG  H+  +  +G+ +Y FG+ E GKLGL    LK
Sbjct: 197 CGYYHSAFVTTEGE-LYTFGEPENGKLGLSPEQLK 230



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G+V+A G NS+ QLGLG+       QLV    +  
Sbjct: 81  VKALKPEKVKIAACGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQH 140

Query: 68  NIRQVSAGRSHSAAWTA 84
            I+Q+SAG + SAA T 
Sbjct: 141 KIKQLSAGSNTSAALTE 157



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 7/76 (9%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           IPA+       +S G EH   ++   +++ +G+N+  QLGLG++    +P  V AL  + 
Sbjct: 36  IPAY-------LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEK 88

Query: 69  IRQVSAGRSHSAAWTA 84
           ++  + GR+H+  +T 
Sbjct: 89  VKIAACGRNHTLVYTE 104


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 701 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 760

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 761 LAFVPSSGLIYAFGCGARGQLGTGHT 786



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 493 VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGESHS 550

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 551 LALSDRGQ-LFSWGAGSDGQLGLMTT 575



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 525 EGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 584

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 585 IQKLNQQTILQVSCGNWHCLALAA 608



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 543 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 602

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
            + +A  G+  + +G   +G+LGLG 
Sbjct: 603 CLALAADGQ-FFTWGKNSHGQLGLGK 627



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 583 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLE 642

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 643 GIPLAQVAAGGAHSFA 658



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S TS + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 631 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 690

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 691 KLLRTQKVVYISCGEEHTAVLT 712



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 689 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 748

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 749 EVTQIACGRQHTLAF 763



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 647 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 706

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 707 HTAVLTKSG-GVFTFGAGSCGQLG 729



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 3/79 (3%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S   + 
Sbjct: 753 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADR 812

Query: 473 TVCIADKGKAVYAFGDGEY 491
             C     K +++ GD  +
Sbjct: 813 --CKYHIVKQIFSGGDQTF 829


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + +      +YAFG G  G+LG G+T
Sbjct: 307 LALVPSSGLIYAFGCGAKGQLGTGHT 332



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S TS + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 17/159 (10%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG------LPQDIPDHYGHLQNKPLP 121
            + Q++ GR H+ A        +  G      L  G       P  +  H+    ++   
Sbjct: 295 EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQ--- 351

Query: 122 LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYS 160
            + AR    +RF    Y+VV+ +  G  DQ +V C+ Y 
Sbjct: 352 -LSAR---ADRFK---YRVVKQIFSGG-DQTFVLCSTYE 382



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A+V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLS 353


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 54/94 (57%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            A+ACG  HS  +T +G ++TFG G YG+LGH T+ N  +P +V  L    V  ++CG  
Sbjct: 255 CALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKVFELMGSSVTQIACGRK 314

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H++        VY FG G  G+LG G+T  + +P
Sbjct: 315 HSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSP 348



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +    +  +V ++ G+ H + ++ TGQ++ WG+N+  QLGL N+    EPQ V  +S 
Sbjct: 140 RMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISG 199

Query: 67  KNIRQVSAGRSHSAAWT 83
             I +V+AG  H+   T
Sbjct: 200 LPIVRVAAGADHNLVLT 216



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I +F N+ +V I+ G +H L V   G+V + GNN   Q  LG++   + P L+ +L  
Sbjct: 36  REIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQ--LGHEKPCKRPALIDSLGE 93

Query: 67  KNIRQVSAGRSHSAAWT 83
           +N+ Q S+G  HS   T
Sbjct: 94  RNVLQASSGTKHSTVLT 110



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 40/67 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           IV ++ G +H L ++ +G +FAWG NS  QLG+G+  +   P LV  L N+ I  ++ G 
Sbjct: 202 IVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGD 261

Query: 77  SHSAAWT 83
            HS A T
Sbjct: 262 DHSLALT 268



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+  V  +G + + GN DYG+LGH      K P  + +L + +V   S G  H+
Sbjct: 49  IACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPC--KRPALIDSLGERNVLQASSGTKHS 106

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             + D G+ V+ +G  E  +LG G 
Sbjct: 107 TVLTDAGQ-VFTWGSNEDNQLGRGQ 130



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGT--TMNWKVPERVVALNKVHVESVSCGLNHTV 474
           G KHS V+T  G ++T+G+ +  +LG G   + +  +P  V  L    V  V+CG  HTV
Sbjct: 102 GTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTV 161

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +   G+ +Y +G   +G+LGL N   +  PQ
Sbjct: 162 GLTATGQ-IYTWGSNNHGQLGLANKTPQNEPQ 192



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG--NQINYREPQLVLALSN 66
           I +    +++  S GT+H   +++ GQVF WG+N D QLG G  +  +   P++V  L++
Sbjct: 88  IDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLAD 147

Query: 67  KNIRQVSAGRSHSAAWTA 84
             + QV+ G +H+   TA
Sbjct: 148 HKVVQVACGSAHTVGLTA 165



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 1/112 (0%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +   S+P        +    +ACG  H+  +T+ G +YT+G+ ++G+LG         P+
Sbjct: 133 SASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQ 192

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            V  ++ + +  V+ G +H + +   G A++A+G   +G+LG+G+   +  P
Sbjct: 193 WVSCISGLPIVRVAAGADHNLVLTISG-ALFAWGCNSFGQLGVGDDQDRGAP 243



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  H+ V+T +G L+ +G   +G+LG G   +   P  V  L    + +++CG +H+
Sbjct: 205 VAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHS 264

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           + +   G  V+ FG G YG+LG
Sbjct: 265 LALTRDG-GVFTFGAGMYGQLG 285



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 37/74 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +N  I  ++ G +H LA++  G VF +G     QLG     N   P+ V  L   +
Sbjct: 246 VKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKVFELMGSS 305

Query: 69  IRQVSAGRSHSAAW 82
           + Q++ GR HS A+
Sbjct: 306 VTQIACGRKHSIAY 319



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 17/194 (8%)

Query: 221 QVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVA 280
           Q+ K    D + P    KV  +GE A DAGGV  +    +  E+L     +    P+   
Sbjct: 728 QLDKQGHHDFKKP---LKVMFVGEEALDAGGVKKEFFLLLLREILDPKYGMFEYFPD--- 781

Query: 281 DTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVT 340
               +R  +       ES + +  ++ +G + G+AI     + L     ++K ++   +T
Sbjct: 782 ----SRQLWFSQ----ESFEDVCMYRLIGTVCGLAIYNGMIIDLKFPLALYKKLLGSSLT 833

Query: 341 FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVP 400
             DL++      +SL+ + D     + E      +  E         +   ++  G ++ 
Sbjct: 834 LEDLKEMQPAVGRSLQCLLDYKEDDIEETF---CLTFEISRDCYGEMKTVSLIPDGSNIA 890

Query: 401 LTFANRLQYYEAAI 414
           +   NR QY  A I
Sbjct: 891 VNKENRQQYVNAYI 904



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHS-AVVTSNGYLYTFGNGDYGR 440
           GA   G++    +  + +P      +      IACG KHS A V S+G +Y FG G  G+
Sbjct: 277 GAGMYGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQ 336

Query: 441 LGHGTTMNWKVPERV 455
           LG G+T+N   P  V
Sbjct: 337 LGTGSTVNRMSPAMV 351


>gi|328873577|gb|EGG21944.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 736

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 3/93 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            I+ G  HS +VT +G L+TFGNG +G+LG G T N+K+P +V     V    VSCG  H
Sbjct: 54  CISMGTLHSGLVTVDGGLWTFGNGSFGKLGLGNTDNYKIPMQVRP--GVQFSMVSCGNEH 111

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           T+ +   G+ V+++G+G  G+LGLGN     TP
Sbjct: 112 TLALDGTGR-VFSWGNGSKGRLGLGNESTMVTP 143



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           +S G EH LA+  TG+VF+WGN S  +LGLGN+     P  +L  S   +  V AG + S
Sbjct: 105 VSCGNEHTLALDGTGRVFSWGNGSKGRLGLGNESTMVTP-CILPFSGV-VLNVYAGGASS 162

Query: 80  AAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
           AA TA  +  +T G+     L LG  +D
Sbjct: 163 AAVTASNV--YTWGYNKYGQLGLGNTKD 188



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 6/84 (7%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFG-NGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           A  + G +H   V   GY+YT+G N DY +LG G + +  VP + V + +  ++S+ CG 
Sbjct: 209 ACFSIGDRHMGAVDDEGYMYTWGCNEDY-QLGDGGSFDKSVPYKHVKIRQ-RMKSIECGG 266

Query: 471 NHTVCIA--DKGKAVYAFGD-GEY 491
             T+ ++  D   ++Y +GD GEY
Sbjct: 267 KFTLSLSNEDDDHSLYIWGDFGEY 290



 Score = 38.1 bits (87), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +  F NI    IS+GT H   V+  G ++ +GN S  +LGLGN  NY+ P  V       
Sbjct: 46  LKQFSNIKC--ISMGTLHSGLVTVDGGLWTFGNGSFGKLGLGNTDNYKIPMQVRP--GVQ 101

Query: 69  IRQVSAGRSHSAA 81
              VS G  H+ A
Sbjct: 102 FSMVSCGNEHTLA 114


>gi|345292925|gb|AEN82954.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292927|gb|AEN82955.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292935|gb|AEN82959.1| AT5G12350-like protein, partial [Capsella rubella]
          Length = 169

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNH 472
           +ACG  HS  V+ +G LYT+G GD+G LGHG  ++  VP+RV   +  +HV S++CG  H
Sbjct: 36  VACGEYHSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYH 95

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  +   G+ ++ FGDG +G LG G+
Sbjct: 96  TAVVTSAGQ-LFTFGDGTFGVLGHGD 120



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 42/67 (62%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 87  SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 146

Query: 472 HTVCIAD 478
           HT  + +
Sbjct: 147 HTAAVVE 153



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 431 YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490
           +++G    GRLGHG   N + P+ + AL   ++E V+CG  H+  ++  G  +Y +G G+
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGD-LYTWGKGD 59

Query: 491 YGKLGLGN 498
           +G LG GN
Sbjct: 60  FGILGHGN 67



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 26/45 (57%)

Query: 37 FAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAA 81
          F+WG  S+ +LG G   N + P+L+ AL   NI  V+ G  HS A
Sbjct: 1  FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCA 45



 Score = 38.5 bits (88), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           I A    +I  ++ G  H  AVS +G ++ WG      LG GN++++  P+ V   +   
Sbjct: 25  IDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGM 84

Query: 68  NIRQVSAGRSHSAAWTAP 85
           ++  ++ G  H+A  T+ 
Sbjct: 85  HVSSIACGPYHTAVVTSA 102


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 2/94 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG  H+A V SNG LYT+G G YG+LGHG       P RV AL  + +  ++CG  HT
Sbjct: 38  VTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHT 97

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT-GLKPTPQ 506
             +  KG  +Y +GD E G  G G+T G + TP+
Sbjct: 98  AVVTSKG-CLYTWGDKENGVAGHGDTEGHQYTPK 130



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 51/82 (62%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           P    + +  Y   +ACG  HSAV+T +G +YTFG G++G+LGH   +N   P  V AL+
Sbjct: 181 PRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLVEALD 240

Query: 460 KVHVESVSCGLNHTVCIADKGK 481
            V V+ ++CG +H+V +  +G+
Sbjct: 241 GVVVKQITCGWSHSVALTSEGE 262



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 4/92 (4%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           ACGF H+A +T +   + +G G +GRLG+GT  N   P  + +L   +   V+CG  H+ 
Sbjct: 145 ACGF-HTACLTDDHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSA 203

Query: 475 CIADKGKAVYAFGDGEYGKLGLGN--TGLKPT 504
            I   GK +Y FG GE+G+LG  +    LKPT
Sbjct: 204 VITRDGK-MYTFGGGEHGQLGHADKVNKLKPT 234



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLNHTVCIADKGKAVYAFGD 488
           ++++G G+ G+LG G T +   P  V AL  V  +  V+CG  HT  +A  G  +Y +G 
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGD-LYTWGG 59

Query: 489 GEYGKLGLGNTGLKPTPQ 506
           G YGKLG GN     TP+
Sbjct: 60  GMYGKLGHGNESGHSTPR 77



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R + A   + IVDI+ G+ H   V++ G ++ WG+  +   G G+   ++  P+L+  L+
Sbjct: 77  RRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLN 136

Query: 66  NKNIRQVSAGRSHSAAWT 83
            K + Q+SA   H+A  T
Sbjct: 137 GKKVVQLSACGFHTACLT 154



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 1/79 (1%)

Query: 8   HIPAFKNIHIV-DISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           ++ A + + I+  ++ G+ H  AV++ G ++ WG     +LG GN+  +  P+ V AL  
Sbjct: 25  YVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVG 84

Query: 67  KNIRQVSAGRSHSAAWTAP 85
            +I  ++ G  H+A  T+ 
Sbjct: 85  LSIVDIACGSRHTAVVTSK 103



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 41/79 (51%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I +    +   ++ G  H   ++  G+++ +G     QLG  +++N  +P LV AL  
Sbjct: 182 RLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLVEALDG 241

Query: 67  KNIRQVSAGRSHSAAWTAP 85
             ++Q++ G SHS A T+ 
Sbjct: 242 VVVKQITCGWSHSVALTSE 260



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V +S    H   +++  + FAWG     +LG G + N   P+L+ +L  K   QV+ G 
Sbjct: 140 VVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGG 199

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 200 FHSAVIT 206


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + +      +YAFG G  G+LG G+T
Sbjct: 307 LALVPSSGLIYAFGCGAKGQLGTGHT 332



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S TS + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 17/159 (10%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG------LPQDIPDHYGHLQNKPLP 121
            + Q++ GR H+ A        +  G      L  G       P  +  H+     +   
Sbjct: 295 EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQ--- 351

Query: 122 LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYS 160
            + AR    +RF    Y+VV+ +  G  DQ +V C+ Y 
Sbjct: 352 -LSAR---ADRFK---YRVVKQIFSGG-DQTFVLCSTYE 382



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 1/43 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           IACG +H+ A+V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 299 IACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 1/94 (1%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           Y+   ++ G+ HS  V+  G+++T G+G +G+LGHG   +   P +V     +HV  V+C
Sbjct: 104 YFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVAC 163

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           G+ H++ +  KG  VY FG G+ G+LG+ N  +K
Sbjct: 164 GMRHSLVLL-KGNQVYGFGSGKRGQLGVSNDRVK 196



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGL 470
           +++ACG  H   +TS G   ++G G+ G+LGHG  + N   P+ V +L+   +  VS G 
Sbjct: 54  SSLACGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGW 113

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +H+  ++D G  V+  GDG +G+LG G+     +P
Sbjct: 114 SHSGFVSDTG-FVFTCGDGSFGQLGHGDNASHCSP 147



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I  ++ G  HV+A+++ G+  +WG  +  QLG G  + N   P+ V +L    I  VSAG
Sbjct: 53  ISSLACGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAG 112

Query: 76  RSHSA 80
            SHS 
Sbjct: 113 WSHSG 117



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + +     I  +S G  H   VS+TG VF  G+ S  QLG G+  ++  P  V    +
Sbjct: 96  KAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFVD 155

Query: 67  KNIRQVSAGRSHS 79
            ++ QV+ G  HS
Sbjct: 156 LHVAQVACGMRHS 168



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 3/95 (3%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVA 457
           P+  +  +  + A +ACG +HS V+     +Y FG+G  G+LG  +    +  VP+ V  
Sbjct: 147 PVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSG 206

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYG 492
              V +   +   +H+  ++  G  VY +G G  G
Sbjct: 207 FEGVEIVGTAANGDHSAAVSVDGH-VYTWGRGFKG 240



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 12/116 (10%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLG---------HGTTMNW 449
           VP    + L + +  +A G+ H+  ++  G +Y  G    G L          H   +  
Sbjct: 246 VPQCLNSSLNFTK--VALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDLRE 303

Query: 450 KVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              E+V  L+   +  ++ G  H+V + + G+ +  +G GE+G+LGLG+T  + +P
Sbjct: 304 FNLEKVPGLDGTKITDIAAGAEHSVIVTEHGE-IKTWGWGEHGQLGLGDTRDQTSP 358



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 26/53 (49%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           +P      I DI+ G EH + V+  G++  WG     QLGLG+  +   P  V
Sbjct: 309 VPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTV 361


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + +      +YAFG G  G+LG G+T
Sbjct: 307 LALVPSSGLIYAFGCGAKGQLGTGHT 332



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S TS + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 17/159 (10%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG------LPQDIPDHYGHLQNKPLP 121
            + Q++ GR H+ A        +  G      L  G       P  +  H+    ++   
Sbjct: 295 EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQ--- 351

Query: 122 LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYS 160
            + AR    +RF    Y+VV+ +  G  DQ +V C+ Y 
Sbjct: 352 -LSAR---ADRFK---YRVVKQIFSGG-DQTFVLCSTYE 382



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A+V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLS 353


>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
          Length = 938

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 137 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHT 196

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + +      +YAFG G  G+LG G+T
Sbjct: 197 LALVPSSGLIYAFGCGAKGQLGTGHT 222



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
          R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 19 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLE 78

Query: 66 NKNIRQVSAGRSHSAA 81
             + QV+AG +HS A
Sbjct: 79 GIPLAQVAAGGAHSFA 94



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S TS + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 67  SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 126

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 127 KLLRTQKVVYISCGEEHTAVLT 148



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 17/159 (10%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 125 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGS 184

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG------LPQDIPDHYGHLQNKPLP 121
            + Q++ GR H+ A        +  G      L  G       P  +  H+    ++   
Sbjct: 185 EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQ--- 241

Query: 122 LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYS 160
            + AR    +RF    Y+VV+ +  G  DQ +V C+ Y 
Sbjct: 242 -LSAR---ADRFK---YRVVKQIFSGG-DQTFVLCSTYE 272



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   + ++G  +T+G   +G+LG G    +   P+RV +L  + +  V+ G  H
Sbjct: 32  VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAH 91

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 92  SFALSLSG-AVFGWGMNNAGQLGLSDEKDRESP 123



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 83  AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 142

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 143 HTAVLTKSG-GVFTFGAGSCGQLG 165



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A+V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 189 IACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLS 243


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G  +YG LGHG  ++  VP+RV   L  +HV S+SCG 
Sbjct: 362 VACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGP 421

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 422 WHTAVVTSSGQ-LFTFGDGTFGVLGHGD 448



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+AVVTS+G L+TFG+G +G LGHG   +  +P  + +L  +     +CG+ 
Sbjct: 415 SSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVW 474

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   K  P
Sbjct: 475 HTAAVVEVMVGNSSSSNCSSGK-LFTWGDGDKGRLGHGDKESKLVP 519



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + +L+  ++E V+CG  HT
Sbjct: 310 IACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHT 369

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLGN 498
             +   G  +Y +GDG   YG LG GN
Sbjct: 370 CAVTLSGD-LYTWGDGTYNYGLLGHGN 395



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 56/106 (52%), Gaps = 18/106 (16%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD GRLGHG   +  VP RVV L++ +
Sbjct: 470 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPN 529

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT---GLKPTP 505
              V+CG + TV ++  G  VY  G   YG   LGNT   G  PTP
Sbjct: 530 FCQVACGHSMTVALSRLGH-VYTMGSCVYGH--LGNTQADGKLPTP 572



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   ++T+G G  G LGHG T +   P  V AL    V+S++CG N T
Sbjct: 585 IACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFT 644

Query: 474 VCIA 477
             I 
Sbjct: 645 AAIC 648



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G EH   V+  G+VF+WG  S  +LG G   +   P+L+ +LSN NI  V+ 
Sbjct: 305 LDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVAC 364

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 365 GEYHTCAVT 373



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNH 472
           +ACG   +  ++  G++YT G+  YG LG+ T  + K+P  V   L+K  VE ++CG  H
Sbjct: 533 VACGHSMTVALSRLGHVYTMGSCVYGHLGN-TQADGKLPTPVEGKLSKSFVEEIACGAYH 591

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +  + + V+ +G G  G LG G+T  + TP
Sbjct: 592 VAVLTSRTE-VFTWGKGANGCLGHGDTNDRNTP 623



 Score = 45.8 bits (107), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 38/65 (58%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +VF WG  ++  LG G+  +   P LV AL +K ++ ++ G 
Sbjct: 582 VEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACGT 641

Query: 77  SHSAA 81
           + +AA
Sbjct: 642 NFTAA 646



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 38/70 (54%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V+++GQ+F +G+ +   LG G++ +   P+ + +L      Q
Sbjct: 409 LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQ 468

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 469 AACGVWHTAA 478



 Score = 38.5 bits (88), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 12/87 (13%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R I + K +  V  + G  H  AV             ++G++F WG+    +LG G++ +
Sbjct: 456 REIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKES 515

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAA 81
              P  V+ L   N  QV+ G S + A
Sbjct: 516 KLVPTRVVTLDEPNFCQVACGHSMTVA 542


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q++P      LQ      IACG   S  V   G +Y +G    G+
Sbjct: 153 GYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 213 LGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 271

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 272 NQSYPTP 278



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G +Y +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 133 VACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKV-VVNIACGQM 191

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +V + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 192 CSVAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 224



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACGF H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 218 SGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 277

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            VV      +E  +C   HT     +G  VY +G
Sbjct: 278 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 216 GSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 275

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 276 PTPVVVEKDRIIEIAACHSTHTSA 299



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 173 RVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 232

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 233 IRVQRVACGFAHTLVLT 249



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP +V   L+   V  V+CG  H++ +  
Sbjct: 86  HIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTS 145

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ VYA+G    G++G G+T  +  P+
Sbjct: 146 DGE-VYAWGYNNSGQVGSGSTANQAIPR 172



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+V+AWG N+  Q+G G+  N   P+ V   L NK + 
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVV 184

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 185 NIACGQMCSVA 195



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 6/117 (5%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +  +  I  +S G+  H++  +  G+VF WG+N   QLG G   +   P Q+   L
Sbjct: 66  RRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG--LPQDIPDHY-GHLQNK 118
           SNK + +V+ G  HS   T+     +  G+  S  +  G    Q IP    G LQNK
Sbjct: 126 SNKQVIEVACGSYHSLVLTSDG-EVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNK 181


>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
 gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
          Length = 753

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 7/105 (6%)

Query: 406 RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK---VPERV--VALNK 460
            +Q     ++CG  H+AVV+++G +YT+G    GRLGHG  +  +   +P RV  + +++
Sbjct: 27  EVQSQRVRLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHR 86

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + V SV+CG+ HT+ +   G  VY++G  EYG+LG G+T     P
Sbjct: 87  IKVLSVACGIEHTLALCRDG--VYSWGSSEYGQLGQGDTQQHTRP 129



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 2/84 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG +H+  +  +G +Y++G+ +YG+LG G T     P  V  L+     +V CG  H
Sbjct: 91  SVACGIEHTLALCRDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCGHYH 149

Query: 473 TVCIADKGKAVYAFGDGEYGKLGL 496
           ++ ++   + VY++G G +G+LGL
Sbjct: 150 SLALS-ADQQVYSWGWGVHGQLGL 172



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I     I ++ ++ G EH LA+   G V++WG++   QLG G+   +  P  V  LS+K 
Sbjct: 81  ILHMHRIKVLSVACGIEHTLALCRDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKK 139

Query: 69  IRQVSAGRSHSAAWTA 84
              V  G  HS A +A
Sbjct: 140 CIAVVCGHYHSLALSA 155



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A+ CG  HS  ++++  +Y++G G +G+LG  +  +  +P  V +L+   V  ++ G +H
Sbjct: 142 AVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           T  +  +GK VY FG G YG+LGLG T  +  PQ
Sbjct: 202 TAVLTTEGK-VYTFGGGLYGQLGLGTTSKQTLPQ 234



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           I CG  H   VT    ++T+G  D+G+LGH T+M+  + P  V  LN+  V + S G   
Sbjct: 278 IHCGNWHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLLFPTVVQKLNESFVATASVGAEF 337

Query: 473 TVCIADKGKAVYAFGDGEYGK 493
           +V +   G+ V+ +G  + G+
Sbjct: 338 SVAMDATGQ-VWVWGRSDSGQ 357



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 43/68 (63%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G+ H+AV+T+ G +YTFG G YG+LG GTT    +P+ V AL K  +  + CG   T
Sbjct: 195 LAAGYSHTAVLTTEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFET 254

Query: 474 VCIADKGK 481
           V ++ + K
Sbjct: 255 VAVSSEQK 262



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           ++    +   + +  G  H LA+S   QV++WG     QLGL +  +   P  V +LS  
Sbjct: 131 YVTELSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGA 190

Query: 68  NIRQVSAGRSHSAAWT 83
            + Q++AG SH+A  T
Sbjct: 191 FVTQLAAGYSHTAVLT 206


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
           of chromosome condensation (RCC1) domains and a PF|01363
           FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1006

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 11/104 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  H+A+VTS+G L+T+G+G +G LGHG+  +   P+ V +L ++ V SVSCG  H
Sbjct: 399 SVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWH 458

Query: 473 TVCIADKGK-----------AVYAFGDGEYGKLGLGNTGLKPTP 505
           T  I +               ++ +GDG+ G+LG  ++  K  P
Sbjct: 459 TAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVP 502



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 7/109 (6%)

Query: 387 GRITPIVTGGQS-----VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G IT ++ G ++      P    +   +   +I+ G KH+A+VT  G ++ +GNG+ G+L
Sbjct: 265 GAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKL 324

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG-DG 489
           G    ++   P+RV +L  V V SV+C  +H  C   +   +Y +G DG
Sbjct: 325 GLKVNIDIDHPKRVESLEDVAVRSVACS-DHQTCAVTESGELYLWGIDG 372



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 49/96 (51%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+S  G++       +SV +   N  + +   IA G  H AV+TS G +YT+G G  G+L
Sbjct: 536 GSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQL 595

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           G G   +   P  V  L    VES++CGLN T  I 
Sbjct: 596 GLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAIC 631



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 13/96 (13%)

Query: 413 AIACGFKHSAVVT------------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           +++CG  H+A +             S G L+T+G+GD GRLGH  +    VP  V  L  
Sbjct: 451 SVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELID 510

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
                VSCG   TV ++  G  VY  G   +G+LG 
Sbjct: 511 HDFIKVSCGWTLTVALSISG-TVYTMGSSIHGQLGC 545



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +  IS+G +H   V+  G+VF WGN +  +LGL   I+   P+ V +L +  +R V+   
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSD 353

Query: 77  SHSAAWT 83
             + A T
Sbjct: 354 HQTCAVT 360



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 38/65 (58%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + DI+ G+ HV  +++ G V+ WG   + QLGLG+  +   P LV  L ++ +  ++ G 
Sbjct: 565 VKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGL 624

Query: 77  SHSAA 81
           + +AA
Sbjct: 625 NLTAA 629



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 1/119 (0%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
           GR+    +  + VP      + +    ++CG+  +  ++ +G +YT G+  +G+LG    
Sbjct: 489 GRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRA 548

Query: 447 MNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +  V   +  L +  V+ ++ G +H   +   G  VY +G G  G+LGLG+   + +P
Sbjct: 549 KDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGN-VYTWGKGMNGQLGLGDVRDRNSP 606


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 60/93 (64%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V ++G LYTFG   YG+LGHG   +  VP +V AL    +++VS G  HT
Sbjct: 228 VACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHT 287

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V + + G+ +Y +G  ++G++G GNT    +P+
Sbjct: 288 VALDEDGE-LYGWGWNKFGQVGCGNTDDHNSPK 319



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 5/107 (4%)

Query: 396 GQSVPLTFANRLQYYEA----AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV 451
           G +  +   N++  +E      +A G +H+A VT +G LY +G G YG LG G   +  V
Sbjct: 154 GHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLV 213

Query: 452 PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           P  V A+    +  V+CG  HT+ +A+ G  +Y FG  +YG+LG G+
Sbjct: 214 PGEVAAVPGEKMNLVACGWRHTIAVANSGN-LYTFGWSKYGQLGHGD 259



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   +T +G ++++G    G+LG G T +  VP +V A   + V+ ++ G  HT
Sbjct: 124 IACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHT 183

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + GK +Y +G G YG LGLG+   +  P
Sbjct: 184 AAVTESGK-LYGWGWGRYGNLGLGDRNDRLVP 214



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 53/87 (60%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +++ G  H+  + S   + ++G G+ G+LGHG      +P  + AL+   + S++CG +H
Sbjct: 18  SVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGADH 77

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T   ++  + VY++G G++G+LG GN+
Sbjct: 78  TTARSESTRTVYSWGWGDFGRLGHGNS 104



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 2/102 (1%)

Query: 399 VPLTFANRLQYYEAAIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +PL  +       ++I CG  H+ A   S   +Y++G GD+GRLGHG + +  +P  +  
Sbjct: 56  LPLVISALDDCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKG 115

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           L  + ++ ++CG +H + I   G+ V+++G  + G+LGLG+T
Sbjct: 116 LKGLEIKQIACGDSHCLAITGDGE-VHSWGRNQNGQLGLGHT 156



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A++ G++H+  +  +G LY +G   +G++G G T +   P+ +  +    V  V+CG  H
Sbjct: 279 AVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRH 338

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           TV I D+G  VY++G G  G+LG G+   +  P+
Sbjct: 339 TVAITDRGN-VYSWGRGTSGQLGHGDAVDRCVPK 371



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I   K + I  I+ G  H LA++  G+V +WG N + QLGLG+  +   P  V A   
Sbjct: 111 RAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEG 170

Query: 67  KNIRQVSAGRSHSAA 81
             ++ ++AG  H+AA
Sbjct: 171 IAVKMLAAGAEHTAA 185



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
            + A KN  I  +S G  H +A+   G+++ WG N   Q+G GN  ++  P+L+  + N+
Sbjct: 268 QVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNE 327

Query: 68  NIRQVSAGRSHSAA 81
            + +V+ G  H+ A
Sbjct: 328 KVTRVTCGWRHTVA 341



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 6/107 (5%)

Query: 7   RHIP----AFKNIHIVDISVGTEHVLAVS-NTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           RH+P    A  +  I  I+ G +H  A S +T  V++WG     +LG GN  +   P+ +
Sbjct: 54  RHLPLVISALDDCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAI 113

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI 108
             L    I+Q++ G SH  A T      H+ G   +  L LG  +D+
Sbjct: 114 KGLKGLEIKQIACGDSHCLAITGDG-EVHSWGRNQNGQLGLGHTEDV 159



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + AF+ I +  ++ G EH  AV+ +G+++ WG      LGLG++ +   P  V A+  + 
Sbjct: 165 VAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEK 224

Query: 69  IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD--IPDHYGHLQNKPLPLI 123
           +  V+ G  H+ A  A     +T G +    L  G  +D  +P     L+NK +  +
Sbjct: 225 MNLVACGWRHTIA-VANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAV 280



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G  H +AV+N+G ++ +G +   QLG G+  ++  P  V AL NK I+ VS G  H+
Sbjct: 228 VACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHT 287

Query: 80  AA 81
            A
Sbjct: 288 VA 289



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           + CG++H+  +T  G +Y++G G  G+LGHG  ++  VP+R+  L+
Sbjct: 332 VTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELLS 377



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN-- 66
           I    N  +  ++ G  H +A+++ G V++WG  +  QLG G+ ++   P+ +  LS   
Sbjct: 321 ITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELLSADG 380

Query: 67  ---KNIRQVSAGRSHSAAWTAPP 86
              + I    +G   S+ W +P 
Sbjct: 381 LACQGIESSPSGNCASSNWISPA 403



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 33/65 (50%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          ++ +S G  H +A+ +   V +WG   D QLG G+      P ++ AL +  I  ++ G 
Sbjct: 16 VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGA 75

Query: 77 SHSAA 81
           H+ A
Sbjct: 76 DHTTA 80


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           IACG  H+  +T+ G LYT+G+G +  G LGHG+ ++  +P+RV   L  + V +VSCG 
Sbjct: 318 IACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGT 377

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   GK +Y FGDG +G LG GN
Sbjct: 378 WHTALITSSGK-LYTFGDGTFGVLGHGN 404



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 12/104 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +A++CG  H+A++TS+G LYTFG+G +G LGHG       P+ V +L  +   SVSCG+ 
Sbjct: 371 SAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVW 430

Query: 472 HTVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           HT  + +          GK ++ +GDG+  +LG G+  + LKPT
Sbjct: 431 HTAAVVEVIMAQSNTSSGK-LFTWGDGDKYRLGHGDRSSKLKPT 473



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG KH+A+VT    ++T+G    GRLGHG   +   P  V +L+  +VE+++CG  HT
Sbjct: 266 VACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHT 325

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             I   G  +Y +GDG +  G LG G+
Sbjct: 326 CAITATGD-LYTWGDGTHNAGLLGHGS 351



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H AV+T +G +YT+G G  GRLGHG   + K P  V AL    V+ ++CG   T
Sbjct: 538 VACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFT 597

Query: 474 VCIA 477
             I 
Sbjct: 598 AAIC 601



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 42/65 (64%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V+++ G  HV  ++ +G+V+ WG  ++ +LG G+  + + P  V AL ++++++++ G 
Sbjct: 535 VVEVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGS 594

Query: 77  SHSAA 81
             +AA
Sbjct: 595 GFTAA 599



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 413 AIACGFKHSAVV---------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +++CG  H+A V         TS+G L+T+G+GD  RLGHG   +   P  V +L   + 
Sbjct: 424 SVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNF 483

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               CG   T+ +   G  ++  G   YG+LG
Sbjct: 484 HKAVCGHTLTIGLTTSGH-IFTAGSSVYGQLG 514



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G +H   V+   +VF WG     +LG G   +  +P+LV +LS  N+  ++ G  H+
Sbjct: 266 VACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHT 325

Query: 80  AAWTA 84
            A TA
Sbjct: 326 CAITA 330



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 3/107 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-L 458
           P    + + Y      CG   +  +T++G+++T G+  YG+LG+    + + P  V   L
Sbjct: 472 PTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPNN-DGRYPRLVEEKL 530

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               V  V+CG  H   +   G+ VY +G G  G+LG G+   + TP
Sbjct: 531 GGGGVVEVACGAYHVAVLTQSGE-VYTWGKGANGRLGHGDIADRKTP 576


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
          Length = 1108

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 11/103 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IACG  HSA+ TSNG L+TFG+G +G LGHG   +   P+ V  L+ +   +V+CG+ H
Sbjct: 375 SIACGTWHSALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTITVACGVWH 434

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           T  I +           + ++ +GDG+  +LG GN  T L+PT
Sbjct: 435 TAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPT 477



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G +H A+VT  G ++T+G    GRLGHG   ++  P+ V  L   +VESV+CG NHT
Sbjct: 269 IASGVRHMALVTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVESVACGENHT 328

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
            C       ++++GDG+Y  G LG G
Sbjct: 329 -CAVSISDELFSWGDGKYNVGLLGHG 353



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 4/89 (4%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCG 469
           ++ACG  H+  V+ +  L+++G+G Y  G LGHGT ++  VP+R+   L  + V S++CG
Sbjct: 320 SVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISIACG 379

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             H+      GK ++ FGDG +G LG GN
Sbjct: 380 TWHSALATSNGK-LFTFGDGTFGVLGHGN 407



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 40/64 (62%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H A +TS   LYT+G G  GRLGHG   + K P  V AL + HV+++SCG + T
Sbjct: 542 ISCGAHHVAALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKERHVKNISCGSSFT 601

Query: 474 VCIA 477
            CI 
Sbjct: 602 SCIC 605



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 3/107 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-AL 458
           P   +  ++Y    IACG   +  +T++G+L+T G  ++G+LG+  + + K+P  V  AL
Sbjct: 476 PTCVSTLIEYNFHQIACGHTMTIALTTSGHLFTMGGTEFGQLGNSLS-DGKIPILVQDAL 534

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               VE +SCG +H   +  + + +Y +G G  G+LG G+   + +P
Sbjct: 535 VGEFVEEISCGAHHVAALTSRSE-LYTWGKGANGRLGHGDIDDRKSP 580



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVVT----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  H+A +           S+  L+T+G+GD  RLGHG    +  P  V  L + + 
Sbjct: 428 VACGVWHTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNF 487

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             ++CG   T+ +   G  ++  G  E+G+LG
Sbjct: 488 HQIACGHTMTIALTTSGH-LFTMGGTEFGQLG 518



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G  H+  V+  G+VF WG  S  +LG G   ++  PQLV  L+  N+  V+ 
Sbjct: 264 LDVHQIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVESVAC 323

Query: 75  GRSHSAA 81
           G +H+ A
Sbjct: 324 GENHTCA 330



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 40/65 (61%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV A+++  +++ WG  ++ +LG G+  + + P LV AL  ++++ +S G 
Sbjct: 539 VEEISCGAHHVAALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKERHVKNISCGS 598

Query: 77  SHSAA 81
           S ++ 
Sbjct: 599 SFTSC 603


>gi|355694489|gb|AER99686.1| hect domain and RLD 3 [Mustela putorius furo]
          Length = 516

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 18  ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 77

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 78  LAFVPSSGLIYAFGCGARGQLGTGHT 103



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8  HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
          H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 6  HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 65

Query: 68 NIRQVSAGRSHSAAW 82
           + Q++ GR H+ A+
Sbjct: 66 EVTQIACGRQHTLAF 80



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 70  IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 112


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+GNG  +YG LGHG  ++  VP+RV   L  +HV  +SCG 
Sbjct: 389 VACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGP 448

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 449 WHTAVVTSAGQ-LFTFGDGTFGALGHGD 475



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 13/104 (12%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +     SCG+ HT
Sbjct: 444 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHT 503

Query: 474 VCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + +             GK ++ +GDG+ G+LG G+   K  P
Sbjct: 504 AAVVEVMVGNSSSSNCSSGK-LFTWGDGDKGRLGHGDKEAKLVP 546



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + AL+  ++E V+CG  HT
Sbjct: 337 IACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHT 396

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLGN 498
             +   G  +Y +G+G   YG LG GN
Sbjct: 397 CAVTLSGD-LYTWGNGAYNYGLLGHGN 422



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 41/71 (57%)

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
           L+ +   IACG  H AV+T    +YT+G G  GRLGHG T +   P  V AL   HV+S+
Sbjct: 604 LKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSI 663

Query: 467 SCGLNHTVCIA 477
           +CG N T  I 
Sbjct: 664 ACGTNFTAAIC 674



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNH 472
           +ACG   +  +T++G++Y  G+  YG+LG+    + K+P RV   L K  VE ++CG  H
Sbjct: 559 VACGHSLTVALTTSGHVYAMGSPVYGQLGN-PQADGKLPTRVEGKLLKSFVEEIACGAYH 617

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +  + + VY +G G  G+LG G+T  +  P
Sbjct: 618 VAVLTLRNE-VYTWGKGANGRLGHGDTDDRNNP 649



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 39/69 (56%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G  H   V+  G++F+WG  S  +LG G   +   P+L+ ALSN NI  V+ 
Sbjct: 332 LDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVAC 391

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 392 GEYHTCAVT 400



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  ++   +V+ WG  ++ +LG G+  +   P LV AL +K+++ ++ G 
Sbjct: 608 VEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGT 667

Query: 77  SHSAA 81
           + +AA
Sbjct: 668 NFTAA 672



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ +   LG G++ +   P+ V +L      +
Sbjct: 436 LEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMR 495

Query: 72  VSAGRSHSAA 81
            S G  H+AA
Sbjct: 496 ASCGVWHTAA 505


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + +      +YAFG G  G+LG G+T
Sbjct: 307 LALVPSSGLIYAFGCGAKGQLGTGHT 332



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S TS + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 17/159 (10%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG------LPQDIPDHYGHLQNKPLP 121
            + Q++ GR H+ A        +  G      L  G       P  +  H+    ++   
Sbjct: 295 EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQ--- 351

Query: 122 LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYS 160
            + AR    +RF    Y+VV+ +  G  DQ +V C+ Y 
Sbjct: 352 -LSAR---ADRFK---YRVVKQIFSGG-DQTFVLCSTYE 382



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A+V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLS 353


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG +HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGMIYAFGCGTRGQLGTGHT 332



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    +   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS--KPEQIGALAGQHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           V ++D+G+ ++++G G  G+LGL
Sbjct: 97  VALSDQGQ-LFSWGAGSDGQLGL 118



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQL 60
            G+    I A    HIV ++ G  H +A+S+ GQ+F+WG  SD QLGL   +     P+L
Sbjct: 71  EGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IKKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  T  +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
            + +A  G+  + +G   YG+LGLG 
Sbjct: 149 CLALAADGQ-FFTWGQNSYGQLGLGK 173



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLD 188

Query: 66  NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
              + QV+AG +HS A +   L     G   +SS +LGL  +
Sbjct: 189 GIPLAQVAAGGAHSFALS---LSGAVFGWGKNSSGQLGLSDE 227



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + +   I +  ++ G  H  A+S +G VF WG NS  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L ++ +  +S G  H+A  T
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLT 258



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   + ++G  +T+G   YG+LG G    +   P+RV +L+ + +  V+ G  H
Sbjct: 142 VSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 202 SFALSLSG-AVFGWGKNSSGQLGLSDERDRESP 233



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   ++  +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAWT 83
            + Q++ GR H+ A+ 
Sbjct: 295 EVSQIACGRHHTLAFV 310



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G    G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 412 AAIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           + IACG  H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341



 Score = 38.5 bits (88), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +G   YG+ G G+ +   +PE  V   ++  +V+ V+CG NH+V + + G+ VY  G
Sbjct: 1   MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGE-VYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
               G+LG    G KP
Sbjct: 60  LNTKGQLGHDCEGSKP 75


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + +      +YAFG G  G+LG G+T
Sbjct: 307 LALVPSSGLIYAFGCGAKGQLGTGHT 332



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S TS + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 17/159 (10%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG------LPQDIPDHYGHLQNKPLP 121
            + Q++ GR H+ A        +  G      L  G       P  +  H+     +   
Sbjct: 295 EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQ--- 351

Query: 122 LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYS 160
            + AR    +RF    Y+VV+ +  G  DQ +V C+ Y 
Sbjct: 352 -LSAR---ADRFK---YRVVKQIFSGG-DQTFVLCSTYE 382



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 1/43 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           IACG +H+ A+V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 299 IACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + +      +YAFG G  G+LG G+T
Sbjct: 307 LALVPSSGLIYAFGCGAKGQLGTGHT 332



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S TS + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 17/159 (10%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG------LPQDIPDHYGHLQNKPLP 121
            + Q++ GR H+ A        +  G      L  G       P  +  H+    ++   
Sbjct: 295 EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQ--- 351

Query: 122 LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYS 160
            + AR    +RF    Y+VV+ +  G  DQ +V C+ Y 
Sbjct: 352 -LSAR---ADRFK---YRVVKQIFSGG-DQTFVLCSTYE 382



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A+V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLS 353


>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
           musculus]
 gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
          Length = 557

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG  +   MN + P+RV+ + +  V  V+CG  
Sbjct: 233 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGG 291

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 292 HTVVLTE--KVVYAFGLGQFGQLGLG 315



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 136

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 137 TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 167



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 9/88 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
           +ACG  H+ V+T    +Y FG G +G+LG GT    T   K+ ER+      H+   SCG
Sbjct: 286 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHI---SCG 341

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            NHT  + + G  +Y FGDG +GKLGLG
Sbjct: 342 ENHTALMTELG-LLYTFGDGRHGKLGLG 368



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + A
Sbjct: 62  ENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKA 121

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L  + ++  + GR+H+   T
Sbjct: 122 LKPEKVKLAACGRNHTLVST 141



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G LYTFG+G +G+LG G     N   P       +  V+ ++CG  
Sbjct: 338 ISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGC 397

Query: 472 HTVCIA 477
           H +  A
Sbjct: 398 HMLVFA 403



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISW--ISCGYYHS 240

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 241 AFVTMDGE-LYTFGEPENGKLGLPN 264



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNK 67
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+  +     Q+V      
Sbjct: 119 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD 178

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 179 TIKQLSAGANTSAALT 194



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL ++ N   P  V     K I  +S G 
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGY 237

Query: 77  SHSA 80
            HSA
Sbjct: 238 YHSA 241


>gi|390343986|ref|XP_003726014.1| PREDICTED: E3 ubiquitin-protein ligase HECTD3 [Strongylocentrotus
           purpuratus]
          Length = 828

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 39/202 (19%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPN-G 278
           D R P +    W+ K L EG  D GG F D++ ++  EL          +P  +R+PN  
Sbjct: 485 DFRWPQQYDQWWECKFLSEGIIDQGGGFRDSLADLAEELCPTGKDDPIPLPFFIRSPNQN 544

Query: 279 VADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEP 338
             D+  NRD Y+ NP    S +    ++++G+L G  +R+++ L L L   VWKL+  E 
Sbjct: 545 NDDSNINRDVYLPNP----SCRQFAKYEWIGMLMGACLRSREHLVLSLPAFVWKLMGYEH 600

Query: 339 VTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRIT-------- 390
           VT++             R  + +  + V      E +  E FE AS+ G +T        
Sbjct: 601 VTWS-------------RDFKTVDAACVKMIELIESMDRETFE-ASFAGELTYTTSLSDQ 646

Query: 391 ---PIVTGGQSVPLTFANRLQY 409
              P+  G     + + +R +Y
Sbjct: 647 TIVPLKDGCTDTHVLYDDRQEY 668


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG +HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGMIYAFGCGTRGQLGTGHT 332



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH +  +   PE + AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS--KPELIGALAGQHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           V ++D+G+ V+++G G  G+LGL
Sbjct: 97  VALSDQGQ-VFSWGAGSDGQLGL 118



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQL 60
            G+    I A    HIV ++ G  H +A+S+ GQVF+WG  SD QLGL   +     P+L
Sbjct: 71  EGSKPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I Q+S G  H  A  A
Sbjct: 131 IKKLNQQTILQISCGNWHCLALAA 154



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ IS G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLD 188

Query: 66  NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
              + QV+AG +HS A +   L     G   +SS +LGL  +
Sbjct: 189 GIPLAQVAAGGAHSFALS---LSGAVFGWGKNSSGQLGLSDE 227



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G ++++G G  G+LG  T  +   VP  +  LN+  +  +SCG  H
Sbjct: 89  VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
            + +A  G+  + +G   YG+LGLG 
Sbjct: 149 CLALAADGQ-FFTWGQNSYGQLGLGK 173



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + +   I +  ++ G  H  A+S +G VF WG NS  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L ++ +  +S G  H+A  T
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLT 258



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I+CG  H   + ++G  +T+G   YG+LG G    +   P+RV +L+ + +  V+ G  H
Sbjct: 142 ISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 202 SFALSLSG-AVFGWGKNSSGQLGLSDERDRESP 233



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   ++  +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVSQIACGRHHTLAF 309



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G    G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 412 AAIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           + IACG  H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 16 HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
          ++ +++ G  H + +   G+V+  G N+  QLG  ++    +P+L+ AL+ ++I  V+ G
Sbjct: 35 NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG--HESEGSKPELIGALAGQHIVHVACG 92

Query: 76 RSHSAA 81
           SHS A
Sbjct: 93 ESHSVA 98


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG +HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGMIYAFGCGTRGQLGTGHT 332



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQL 60
            G+    I A    HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   +     P+L
Sbjct: 71  EGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IKKLNQQTILQVSCGNWHCLALAA 154



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    +   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS--KPEQIGALAGQHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + ++D+G+ ++++G G  G+LGL
Sbjct: 97  LALSDQGQ-LFSWGAGSDGQLGL 118



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLD 188

Query: 66  NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
              + QV+AG +HS A +   L     G   +SS +LGL  +
Sbjct: 189 GIPLAQVAAGGAHSFALS---LSGAVFGWGKNSSGQLGLSDE 227



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  T  +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   YG+LGLG
Sbjct: 149 CLALAADGQ-FFTWGQNSYGQLGLG 172



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + +   I +  ++ G  H  A+S +G VF WG NS  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L ++ +  +S G  H+A  T
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLT 258



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   + ++G  +T+G   YG+LG G    +   P+RV +L+ + +  V+ G  H
Sbjct: 142 VSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 202 SFALSLSG-AVFGWGKNSSGQLGLSDERDRESP 233



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   ++  +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVSQIACGRHHTLAF 309



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G    G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 412 AAIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           + IACG  H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341


>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Takifugu rubripes]
          Length = 726

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 54/96 (56%), Gaps = 7/96 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+  +T    L+TFG G +G+LGHGT     ++P  V    K  V  V+CG NH
Sbjct: 249 VACGGGHTVALTEE-RLFTFGLGQFGQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENH 307

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTG----LKPT 504
           T  I D G  +Y FGDG +GKLGLG        KPT
Sbjct: 308 TAVITDGG-LLYTFGDGRHGKLGLGEENFTNQFKPT 342



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A++T NG L+ FG+ ++G+LG G+      P  V AL    V  V+CG NHT
Sbjct: 41  IACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNHT 100

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +    +GK V++ G    G+LGLG+   + T Q
Sbjct: 101 LICTAQGK-VFSSGGNSEGQLGLGDCEERTTFQ 132



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           ++CG+ HSA VT++G LYTFG  D G+LG  T      +VP+ V ++ K  V  V+CG  
Sbjct: 196 VSCGYYHSAFVTADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSI-KEPVTQVACGGG 254

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  + ++ FG G++G+LG G
Sbjct: 255 HTVALTE--ERLFTFGLGQFGQLGHG 278



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           +ACG  H+AV+T  G LYTFG+G +G+LG G     N   P       K  V++ +CG  
Sbjct: 301 VACGENHTAVITDGGLLYTFGDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQAATCGGC 360

Query: 472 HTVCIA 477
           H V +A
Sbjct: 361 HMVVLA 366



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 42/73 (57%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            KN   + I+ G EH   ++  G++F +G+N+  QLGLG++    +P  V AL  + +  
Sbjct: 33  LKNDVPLKIACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLL 92

Query: 72  VSAGRSHSAAWTA 84
           V+ GR+H+   TA
Sbjct: 93  VACGRNHTLICTA 105



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 2/94 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLNH 472
           +ACG  H+ + T+ G +++ G    G+LG G        +R+ A + +  V+ ++ G N 
Sbjct: 93  VACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGPVKMLAAGSNT 152

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  + + GK ++ +GD   G++GL      P+PQ
Sbjct: 153 SAALTESGK-LFMWGDNTEGQIGLAKESHAPSPQ 185



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K   ++ ++ G  H L  +  G+VF+ G NS+ QLGLG+       Q + A  +  
Sbjct: 82  VKALKTEKVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLG 141

Query: 69  -IRQVSAGRSHSAAWT 83
            ++ ++AG + SAA T
Sbjct: 142 PVKMLAAGSNTSAALT 157



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 9/80 (11%)

Query: 12  FKNIHIVD-------ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           F+ IH  D       ++ G+    A++ +G++F WG+N++ Q+GL  + +   PQ V   
Sbjct: 131 FQRIHAFDSLGPVKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEVDV- 189

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
               I  VS G  HSA  TA
Sbjct: 190 -GGPISWVSCGYYHSAFVTA 208


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG +HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGMIYAFGCGTRGQLGTGHT 332



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH +  +   PE + AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS--KPEPIGALAGQHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           V ++D+G+ V+++G G  G+LGL
Sbjct: 97  VALSDQGQ-VFSWGAGSDGQLGL 118



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQL 60
            G+    I A    HIV ++ G  H +A+S+ GQVF+WG  SD QLGL   +     P+L
Sbjct: 71  EGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I Q+S G  H  A  A
Sbjct: 131 IKKLNQQTILQISCGNWHCLALAA 154



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ IS G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLD 188

Query: 66  NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
              + QV+AG +HS A +   L     G   +SS +LGL  +
Sbjct: 189 GIPLAQVAAGGAHSFALS---LSGAVFGWGKNSSGQLGLSDE 227



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G ++++G G  G+LG  T  +   VP  +  LN+  +  +SCG  H
Sbjct: 89  VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
            + +A  G+  + +G   YG+LGLG 
Sbjct: 149 CLALAADGQ-FFTWGQNSYGQLGLGK 173



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + +   I +  ++ G  H  A+S +G VF WG NS  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L ++ +  +S G  H+A  T
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLT 258



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I+CG  H   + ++G  +T+G   YG+LG G    +   P+RV +L+ + +  V+ G  H
Sbjct: 142 ISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 202 SFALSLSG-AVFGWGKNSSGQLGLSDERDRESP 233



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   ++  +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVSQIACGRHHTLAF 309



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G    G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +G   +G+ G G+ +   +PE  V   ++  +V+ V+CG NH+V + + G+ VY  G
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGE-VYTCG 59

Query: 488 DGEYGKLGLGNTGLKPTP 505
               G+LG  + G KP P
Sbjct: 60  LNTKGQLGHESEGSKPEP 77



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 412 AAIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           + IACG  H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341


>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
          Length = 531

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P    + LQ      IACG   S  V  NG +Y +G    G+
Sbjct: 158 GYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQ 217

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + V+ V+CG  HT+ + D+G+ +YA+G   YG+LG GN  
Sbjct: 218 LGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ-IYAWGANSYGQLGTGNKS 276

Query: 501 LKPTP 505
            +  P
Sbjct: 277 NQSYP 281



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G +YT+G  + G++G G+T N  +P RV +   NK+ V +++CG  
Sbjct: 138 VACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKI-VVNIACGQM 196

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ VY +G    G+LGLG++G +PTP
Sbjct: 197 CSMAVVENGE-VYVWGYNGNGQLGLGSSGNQPTP 229



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  ++ G  H L +++ GQ++AWG NS  QLG GN+ N   
Sbjct: 221 GSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY 280

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 281 PTTVVVDKDRVIEIAACHSAHTSA 304



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H  + T  G +YT+G+  Y +LG+GTT +  VP +V    +NK  +E V+CG +H++ + 
Sbjct: 91  HVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIE-VACGSHHSMVLT 149

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             G+ VY +G    G++G G+T  +P P+
Sbjct: 150 SDGE-VYTWGYNNSGQVGSGSTANQPIPR 177



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 46/106 (43%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G +  G++    +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+L
Sbjct: 211 GYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL 270

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G G   N   P  VV      +E  +C   HT     +   VY +G
Sbjct: 271 GTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 316



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV   G+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 178 RVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 237

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 238 IRVQRVACGYAHTLVLT 254



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQV 72
           N  +++++ G+ H + +++ G+V+ WG N+  Q+G G+  N   P+ V + L NK +  +
Sbjct: 132 NKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNI 191

Query: 73  SAGRSHSAA 81
           + G+  S A
Sbjct: 192 ACGQMCSMA 200



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  HV+  +  G+V+ WG+N+ +QLG G   +   P Q+   L
Sbjct: 71  RRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNL 130

Query: 65  SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIP 109
            NK + +V+ G  HS   T+     +T G+  S  +  G   + P
Sbjct: 131 VNKKVIEVACGSHHSMVLTSDG-EVYTWGYNNSGQVGSGSTANQP 174


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G Y  G LGHG  ++  VP+RV   L  +H+ S+SCG 
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGP 424

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   GK ++ FGDG +G LG G+
Sbjct: 425 WHTALVTSAGK-LFTFGDGTFGVLGHGD 451



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+A+VTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 418 SSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVW 477

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 478 HTAAVVEVIIGNPNSNNNSSGK-LFTWGDGDKGRLGHGDKEARLVP 522



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + AL+ +++E V+CG  HT
Sbjct: 313 IACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHT 372

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             +   G  +Y +GDG Y  G LG G
Sbjct: 373 CAVTLSGD-LYTWGDGTYNSGLLGHG 397



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H AV+TS   +YT+G G  GRLGHG+T +   P  V AL    V+S++CG N T
Sbjct: 588 LACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFT 647

Query: 474 VCIA 477
             I 
Sbjct: 648 AAIC 651



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+    + K+P RV   
Sbjct: 521 VPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGK 579

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE ++CG  H   +  + + VY +G G  G+LG G+T  + TP
Sbjct: 580 LSKSFVEELACGAYHVAVLTSRTE-VYTWGKGANGRLGHGSTDDRNTP 626



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD GRLGHG      VP  V AL + +
Sbjct: 473 ACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPN 532

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV + + G  +Y  G   YG+LG
Sbjct: 533 FCQVACGHSLTVALTNSGH-IYTMGSPVYGQLG 564



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G  H   V+  G+VF+WG     +LG G   +   P+L+ ALSN NI  V+ 
Sbjct: 308 LDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVAC 367

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 368 GEYHTCAVT 376



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +++ G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K ++ ++ G 
Sbjct: 585 VEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGT 644

Query: 77  SHSAA 81
           + +AA
Sbjct: 645 NFTAA 649


>gi|297597956|ref|NP_001044792.2| Os01g0846800 [Oryza sativa Japonica Group]
 gi|56784032|dbj|BAD82660.1| UVB-resistance protein UVR8-like [Oryza sativa Japonica Group]
 gi|56784705|dbj|BAD81831.1| UVB-resistance protein UVR8-like [Oryza sativa Japonica Group]
 gi|255673871|dbj|BAF06706.2| Os01g0846800 [Oryza sativa Japonica Group]
          Length = 180

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIACG +HSAVVT +G L TFG G YG+ G G T +   P  V ++  V ++ +  GL H
Sbjct: 7   AIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGVKMQDIGAGLWH 66

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           TVC +  G  VY+FG  ++G+LG G+   +  P+
Sbjct: 67  TVCTSVDGD-VYSFGGNQFGQLGTGSDQAETVPK 99



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 3/108 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-- 457
           P   ++ L      I  G  H+   + +G +Y+FG   +G+LG G+     VP+ V A  
Sbjct: 46  PTCVSSILGVKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASS 105

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L   +  +VSCG  H+  I D+G+ V+ +G  +YG+LGLG++  +  P
Sbjct: 106 LENKNARAVSCGARHSAIITDEGE-VFCWGWNKYGQLGLGDSMDRNVP 152



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 397 QSVP-LTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           ++VP L  A+ L+   A A++CG +HSA++T  G ++ +G   YG+LG G +M+  VP  
Sbjct: 95  ETVPKLVDASSLENKNARAVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCS 154

Query: 455 VVALNKVHVESVSCGLNHTVCIADK 479
            V ++  H  +VSCG  HT+ +A+ 
Sbjct: 155 -VPVDAYHPLNVSCGWWHTLVLAES 178



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           + +   + + DI  G  H +  S  G V+++G N   QLG G+      P+LV A  L N
Sbjct: 49  VSSILGVKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASSLEN 108

Query: 67  KNIRQVSAGRSHSA 80
           KN R VS G  HSA
Sbjct: 109 KNARAVSCGARHSA 122


>gi|351707650|gb|EHB10569.1| X-linked retinitis pigmentosa GTPase regulator [Heterocephalus
           glaber]
          Length = 1209

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 4/102 (3%)

Query: 403 FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           F N +  Y   ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    
Sbjct: 7   FKNDIPMY---LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEK 63

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           V+  +CG NHT+ +  +G +VYA G    G+LGLG+T  + T
Sbjct: 64  VQLAACGRNHTLVLTVEG-SVYAAGGNNEGQLGLGDTEERNT 104



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG+ HSA VT +G LYTFG  + G+LG      +N + P+ V  + +  ++ V+CG  
Sbjct: 204 VACGYYHSAFVTMDGELYTFGESESGKLGLPKELLINHRTPQLVAGIPEKVIQ-VACGGG 262

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  KAVYAFG G++G+LGLG
Sbjct: 263 HTVVLTE--KAVYAFGLGQFGQLGLG 286



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +Y FG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 257 VACGGGHTVVLTEKA-VYAFGLGQFGQLGLGTFLFETSEPKVIEQIKDQKITYISCGENH 315

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I DKG  VY FGDG +GKLGLG
Sbjct: 316 TALITDKG-LVYTFGDGRHGKLGLG 339



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N   P       +  V+ V+CG  
Sbjct: 309 ISCGENHTALITDKGLVYTFGDGRHGKLGLGVENFTNQFFPIVCSEFLRFTVQLVACGGC 368

Query: 472 HTVCIA 477
            T+  A
Sbjct: 369 QTLVFA 374



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%)

Query: 12 FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
          FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 7  FKNDIPMYLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVQL 66

Query: 72 VSAGRSHSAAWT 83
           + GR+H+   T
Sbjct: 67 AACGRNHTLVLT 78



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNK 67
           + A K   +   + G  H L ++  G V+A G N++ QLGLG+        ++    S  
Sbjct: 56  VKALKPEKVQLAACGRNHTLVLTVEGSVYAAGGNNEGQLGLGDTEERNTFHRISFFTSQH 115

Query: 68  NIRQVSAGRSHSAAWTA 84
           NI+Q+SAG + SAA +A
Sbjct: 116 NIKQLSAGSNTSAALSA 132



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 34  GQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPG 93
           G++F WG+NS+ Q+GL N IN   P  V     K I  V+ G  HSA  T      +T G
Sbjct: 168 GRLFVWGDNSEGQIGLNNIINVCVPHQVNI--GKPISWVACGYYHSAFVTMDG-ELYTFG 224

Query: 94  HTPSSSLRLGLPQDI 108
              S S +LGLP+++
Sbjct: 225 E--SESGKLGLPKEL 237


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P    + LQ      IACG   S  V  NG +Y +G    G+
Sbjct: 153 GYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + V+ V+CG  HT+ + D+G+ +YA+G   YG+LG GN  
Sbjct: 213 LGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ-IYAWGANSYGQLGTGNKS 271

Query: 501 LKPTP 505
            +  P
Sbjct: 272 NQSYP 276



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G +YT+G  + G++G G+T N  +P RV +   NK+ V +++CG  
Sbjct: 133 VACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKI-VVNIACGQM 191

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ VY +G    G+LGLG++G +PTP
Sbjct: 192 CSMAVVENGE-VYVWGYNGNGQLGLGSSGNQPTP 224



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  ++ G  H L +++ GQ++AWG NS  QLG GN+ N   
Sbjct: 216 GSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY 275

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 276 PTTVVVDKDRVIEIAACHSAHTSA 299



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H  + T  G +YT+G+  Y +LG+GTT +  VP +V    +NK  +E V+CG +H++ + 
Sbjct: 86  HVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIE-VACGSHHSMVLT 144

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             G+ VY +G    G++G G+T  +P P+
Sbjct: 145 SDGE-VYTWGYNNSGQVGSGSTANQPIPR 172



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 218 SGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT 277

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            VV      +E  +C   HT     +   VY +G
Sbjct: 278 TVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 311



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV   G+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 173 RVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 232

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 233 IRVQRVACGYAHTLVLT 249



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQV 72
           N  +++++ G+ H + +++ G+V+ WG N+  Q+G G+  N   P+ V + L NK +  +
Sbjct: 127 NKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNI 186

Query: 73  SAGRSHSAA 81
           + G+  S A
Sbjct: 187 ACGQMCSMA 195



 Score = 39.3 bits (90), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  HV+  +  G+V+ WG+N+ +QLG G   +   P Q+   L
Sbjct: 66  RRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
            NK + +V+ G  HS   T+
Sbjct: 126 VNKKVIEVACGSHHSMVLTS 145


>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Ornithorhynchus anatinus]
          Length = 806

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+  +T    +YTFG G++G+LG GT +    VP+ V  L K  +  V+CG NH
Sbjct: 334 VACGGGHTVALTEED-VYTFGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENH 392

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I+D G  +Y FGDG +GKLGLG
Sbjct: 393 TALISDTG-LMYTFGDGRHGKLGLG 416



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 57/86 (66%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           ++CG+ HSA+VT++G LYTFG  + G+LG  +    N ++P+ V  ++   V  V+CG  
Sbjct: 281 VSCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPGISG-KVNQVACGGG 339

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + ++   VY FG GE+G+LGLG
Sbjct: 340 HTVALTEED--VYTFGLGEFGQLGLG 363



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 29/172 (16%)

Query: 336 QEPVTFTDLEDNDTLYAQSLRAIRDIHLSGV---TEANFPEIIPLECFEGASWTGRITPI 392
           +E + + D    D L A + R  R  H   V    ++ F E IP        W    T  
Sbjct: 70  RETMIYDDFRKKDELRANTYRKFRTRHSGAVFTFGKSKFAENIP-----SKFWLRNDTL- 123

Query: 393 VTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP 452
                              A ++CG +H+A VT N  LY  G+ ++G+LG G+      P
Sbjct: 124 -------------------AQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKP 164

Query: 453 ERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
             V AL    V+  +CG NHT+ +  +G  VYA G    G+LGLG+T  + T
Sbjct: 165 TCVKALKPEKVKFAACGRNHTL-VCTEGGNVYAAGGNSDGQLGLGDTEERTT 215



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           +Y    ++ G   SA +T +G LY +G+   G++G  +  N  VP RVV    V    VS
Sbjct: 225 RYKIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVVIGKPVSW--VS 282

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           CG  H+  +   G+ +Y FG+ E GKLGL +  LK
Sbjct: 283 CGYYHSALVTTDGE-LYTFGEPENGKLGLSSEQLK 316



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           +ACG  H+A+++  G +YTFG+G +G+LG G     N  +P       +  V  V+CG  
Sbjct: 386 VACGENHTALISDTGLMYTFGDGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACGGC 445

Query: 472 HTVCIA 477
           H +  A
Sbjct: 446 HMLVFA 451



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALSNK 67
           + A K   +   + G  H L  +  G V+A G NSD QLGLG+ +      Q+    S  
Sbjct: 167 VKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRY 226

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 227 KIKQLSAGSNTSAALT 242



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 39/72 (54%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            +N  +  +S G EH   V+   +++  G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 118 LRNDTLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKF 177

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 178 AACGRNHTLVCT 189



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G+    A++  G+++ WG+NS+ Q+GL ++ N   P  V+    K +  VS G 
Sbjct: 228 IKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVVI--GKPVSWVSCGY 285

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 286 YHSALVT 292


>gi|440791628|gb|ELR12866.1| ADPribosylation factor subfamily protein [Acanthamoeba castellanii
           str. Neff]
          Length = 1048

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 5/90 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS----CG 469
           +ACG  HS  VTS+G LY+FG G +G+LGHGT ++   P RV AL  V V  V+     G
Sbjct: 604 VACGDNHSLCVTSDGALYSFGQGKHGQLGHGTRLDCCTPTRVEALLDVPVVQVAGGGGLG 663

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           ++H+V I  +G   Y +G G+YG+LG  +T
Sbjct: 664 VSHSVAITAQGD-CYTWGGGKYGQLGHSHT 692



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESVSCGLNHTVC 475
           G  HS  +T+ G  YT+G G YG+LGH  TT +   P  V +L    V   +CG  HT  
Sbjct: 663 GVSHSVAITAQGDCYTWGGGKYGQLGHSHTTQDELEPRLVASLRGKRVVGAACGWLHTAL 722

Query: 476 IADK 479
           + D+
Sbjct: 723 LIDE 726



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           G G T   K P  V  L+  HV  V+CG NH++C+   G A+Y+FG G++G+LG G 
Sbjct: 582 GTGNTEQVKAPTLVPGLS--HVRRVACGDNHSLCVTSDG-ALYSFGQGKHGQLGHGT 635



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 396 GQSVPLTFANRLQYYEAAIAC-GFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           G S P  FA +    +A +A  G + S   + S+G +YTFG G +G+LG GT      P 
Sbjct: 354 GSSYPAHFAFQCVLGKALLARRGPRFSEGSIASHGKVYTFGFGKHGQLGLGTLCQSAEPT 413

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490
            V  L    V  V+C    T  +  +G A    G+GE
Sbjct: 414 IVPTLVSAQVVQVACAGAKTYALTAQGLAYEWGGEGE 450



 Score = 38.9 bits (89), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 9   IPAFKNIHIVDIS----VGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLA 63
           + A  ++ +V ++    +G  H +A++  G  + WG     QLG  +      EP+LV +
Sbjct: 645 VEALLDVPVVQVAGGGGLGVSHSVAITAQGDCYTWGGGKYGQLGHSHTTQDELEPRLVAS 704

Query: 64  LSNKNIRQVSAGRSHSAAWTAPPLPPH 90
           L  K +   + G  H+A     P+  H
Sbjct: 705 LRGKRVVGAACGWLHTALLIDEPISAH 731


>gi|392352546|ref|XP_222205.6| PREDICTED: probable E3 ubiquitin-protein ligase C12orf51-like [Rattus
            norvegicus]
          Length = 4416

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 147/337 (43%), Gaps = 35/337 (10%)

Query: 105  PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
            P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 3915 PADATDPRMACLSNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTPMYAHSIAALL 3972

Query: 164  HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
              +   +F     T+ + R +  T+     +  P +T+  L T   + + +    F Q +
Sbjct: 3973 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLETVGGEIRASENSYFCQAA 4031

Query: 220  RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
            RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 4032 RQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 4091

Query: 273  VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L P  W
Sbjct: 4092 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDLLPSFW 4147

Query: 332  KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII-----------PLEC 379
            K +V EP+    DL++ D L    ++    I+     EA   EI            P  C
Sbjct: 4148 KTLVGEPLDPDQDLQEADILTYNYVKKFESINDESELEALCAEIASQHLATDSPEGPKPC 4207

Query: 380  --FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
              F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 4208 CRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 4243


>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
          Length = 1024

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 248 VACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT--GLKPTP 505
           +  ++D GK V++FG G+ G+LG G T   L P P
Sbjct: 308 LAYVSDLGK-VFSFGSGKDGQLGNGGTRDQLMPLP 341



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S T+ + +     + +  IS G  H  A+S +G +++WG N   QLGLG+  +  +P L+
Sbjct: 178 STTTPQIVEHLAGVPLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLI 237

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPL 87
             L N+ +  V+ G SHSA  T   L
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGL 263



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  + G+LG G T +   P  +  L+   VE V+CG +
Sbjct: 194 AQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  +   G  ++ FG G++G+LG  +T
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNST 280



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G +  +   PQ+V  L+   + Q+SAG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 76  RSHSAA 81
            +HS A
Sbjct: 200 EAHSTA 205



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L  V +  +S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G  +Y++G  E G+LGLG+T  K  P
Sbjct: 203 STALSMSGN-IYSWGKNECGQLGLGHTESKDDP 234


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 58/93 (62%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V  +G +YTFG   YG+LGHG   +  +P +V AL    +++++ G  HT
Sbjct: 228 VACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHT 287

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +   G+ +Y +G  ++G++G GNT  + +PQ
Sbjct: 288 FALDSDGR-LYGWGWNKFGQVGCGNTEDQSSPQ 319



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G +H+  VT NG LY +G G YG LG G   +  VP++V A+    ++ V+CG  HT
Sbjct: 176 LAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHT 235

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           +C+A+ G  +Y FG  +YG+LG G+
Sbjct: 236 ICVAESGN-MYTFGWSKYGQLGHGD 259



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 55/94 (58%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A++ G  HS  + S   + ++G G+ G+LGHG       P  V AL+   + SV+CG +H
Sbjct: 18  ALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGADH 77

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           T  +++  K VY++G G++G+LG GN+     PQ
Sbjct: 78  TTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQ 111



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 412 AAIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           +++ CG  H+ A+  S   +Y++G GD+GRLGHG + +  +P+ + AL  + V+ ++CG 
Sbjct: 69  SSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGD 128

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +H + I   G+ V  +G  + G+LGLG+T    TP 
Sbjct: 129 SHCLAITTDGE-VLGWGRNQNGQLGLGHTEDVLTPH 163



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AI  G++H+  + S+G LY +G   +G++G G T +   P+ V  L    V  V CG  H
Sbjct: 279 AITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRH 338

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           T+ + D+G  VY++G G  G+LG G+T  + TP+
Sbjct: 339 TLAMTDRGN-VYSWGRGTSGQLGHGDTVDRSTPK 371



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   +T++G +  +G    G+LG G T +   P ++ A   V V+ ++ G  HT
Sbjct: 124 IACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHT 183

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             + + GK +Y +G G YG LGLG+
Sbjct: 184 TAVTENGK-LYGWGWGRYGNLGLGD 207



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A K + +  I+ G  H LA++  G+V  WG N + QLGLG+  +   P  + A     
Sbjct: 113 IKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVA 172

Query: 69  IRQVSAGRSHSAA 81
           ++ ++AG  H+ A
Sbjct: 173 VKMLAAGAEHTTA 185



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
            + A K+  I  I+ G  H  A+ + G+++ WG N   Q+G GN  +   PQLV  L ++
Sbjct: 268 QVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQ 327

Query: 68  NIRQVSAGRSHSAAWT 83
            +  V  G  H+ A T
Sbjct: 328 VVTVVQCGWRHTLAMT 343



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 7   RHIP----AFKNIHIVDISVGTEHVLAVSN-TGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           RH P    A  +  I  ++ G +H  A+SN T  V++WG     +LG GN  +   PQ +
Sbjct: 54  RHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPI 113

Query: 62  LALSNKNIRQVSAGRSHSAA 81
            AL    ++Q++ G SH  A
Sbjct: 114 KALKGLEVKQIACGDSHCLA 133



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 40/71 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + AF+ + +  ++ G EH  AV+  G+++ WG      LGLG++ +   P  V A++ + 
Sbjct: 165 LTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGEL 224

Query: 69  IRQVSAGRSHS 79
           ++ V+ G  H+
Sbjct: 225 MKMVACGWRHT 235



 Score = 45.1 bits (105), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 38/73 (52%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
           G++    T  QS P             + CG++H+  +T  G +Y++G G  G+LGHG T
Sbjct: 305 GQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDT 364

Query: 447 MNWKVPERVVALN 459
           ++   P+R+  L+
Sbjct: 365 VDRSTPKRIEILS 377



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 33/66 (50%)

Query: 16 HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           ++ +S G  H +A+ +   V +WG   D QLG G+      P +V AL +  I  V+ G
Sbjct: 15 QVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCG 74

Query: 76 RSHSAA 81
            H+ A
Sbjct: 75 ADHTTA 80



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 3/84 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   ++  +  +  G  H LA+++ G V++WG  +  QLG G+ ++   P+ +  LS+  
Sbjct: 321 VKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSDG 380

Query: 69  I--RQV-SAGRSHSAAWTAPPLPP 89
               Q+ S+G S+  + T+  + P
Sbjct: 381 FACEQIESSGSSNCTSKTSNWISP 404


>gi|392332617|ref|XP_001079719.3| PREDICTED: probable E3 ubiquitin-protein ligase C12orf51-like [Rattus
            norvegicus]
          Length = 4416

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 147/337 (43%), Gaps = 35/337 (10%)

Query: 105  PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
            P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 3915 PADATDPRMACLSNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTPMYAHSIAALL 3972

Query: 164  HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
              +   +F     T+ + R +  T+     +  P +T+  L T   + + +    F Q +
Sbjct: 3973 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLETVGGEIRASENSYFCQAA 4031

Query: 220  RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
            RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 4032 RQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 4091

Query: 273  VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L P  W
Sbjct: 4092 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDLLPSFW 4147

Query: 332  KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII-----------PLEC 379
            K +V EP+    DL++ D L    ++    I+     EA   EI            P  C
Sbjct: 4148 KTLVGEPLDPDQDLQEADILTYNYVKKFESINDESELEALCAEIASQHLATDSPEGPKPC 4207

Query: 380  --FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
              F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 4208 CRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 4243


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA RL      I+CG +H+A+VT  G +Y++G    GRLGHG   +   P+ + AL+
Sbjct: 342 PLEFAVRLDVQN--ISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALS 399

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +GDG  ++G LG GN
Sbjct: 400 HMNIELVACGEYHTCAVTLSGD-LYTWGDGTFKFGLLGHGN 439



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+AVVTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 459 SSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVW 518

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+ G K  P
Sbjct: 519 HTAAVVEVMAGNSSSSNCSSGK-IFTWGDGDKGRLGHGDKGPKLVP 563



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G   +G LGHG  ++  VP+ V   L  +HV S+SCG 
Sbjct: 406 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEGIHVSSISCGP 465

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 466 WHTAVVTSAGQ-LFTFGDGSFGVLGHGD 492



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 3/120 (2%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
           GR+     G + VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+   
Sbjct: 550 GRLGHGDKGPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQA 609

Query: 447 MNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +  +P RV   L+K  VE +SCG  H   +  K + VY +G G  G+LG G+T  K TP
Sbjct: 610 -DGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTE-VYTWGKGANGRLGHGDTDDKNTP 667



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 36/64 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V  V CG+N T
Sbjct: 629 ISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCGINFT 688

Query: 474 VCIA 477
             I 
Sbjct: 689 AAIC 692



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS G  H   V+  G++++WG  S  +LG G   +  +P+L+ ALS+ NI  V+ 
Sbjct: 349 LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVAC 408

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 409 GEYHTCAVT 417



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG      VP  V AL + +
Sbjct: 514 ACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEPN 573

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG   TV +   G  VY  G   YG+LG
Sbjct: 574 FCQVACGHCLTVALTTSGH-VYTMGSAVYGQLG 605



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K +R V  G 
Sbjct: 626 VEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCGI 685

Query: 77  SHSAA 81
           + +AA
Sbjct: 686 NFTAA 690



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 453 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVR 512

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 513 AACGVWHTAA 522


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G Y  G LGHG  ++  VP+RV   L  +H+ S+SCG 
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGP 424

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   GK ++ FGDG +G LG G+
Sbjct: 425 WHTALVTSAGK-LFTFGDGTFGVLGHGD 451



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+A+VTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 418 SSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVW 477

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 478 HTAAVVEVIIGNPNSNNNSSGK-LFTWGDGDKGRLGHGDKEARLVP 522



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + AL+ +++E V+CG  HT
Sbjct: 313 IACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHT 372

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             +   G  +Y +GDG Y  G LG G
Sbjct: 373 CAVTLSGD-LYTWGDGTYNSGLLGHG 397



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H AV+TS   +YT+G G  GRLGHG+T +   P  V AL    V+S++CG N T
Sbjct: 588 LACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFT 647

Query: 474 VCIA 477
             I 
Sbjct: 648 AAIC 651



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+    + K+P RV   
Sbjct: 521 VPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGK 579

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE ++CG  H   +  + + VY +G G  G+LG G+T  + TP
Sbjct: 580 LSKSFVEELACGAYHVAVLTSRTE-VYTWGKGANGRLGHGSTDDRNTP 626



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD GRLGHG      VP  V AL + +
Sbjct: 473 ACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPN 532

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV + + G  +Y  G   YG+LG
Sbjct: 533 FCQVACGHSLTVALTNSGH-IYTMGSPVYGQLG 564



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G  H   V+  G+VF+WG     +LG G   +   P+L+ ALSN NI  V+ 
Sbjct: 308 LDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVAC 367

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 368 GEYHTCAVT 376



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +++ G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K ++ ++ G 
Sbjct: 585 VEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGT 644

Query: 77  SHSAA 81
           + +AA
Sbjct: 645 NFTAA 649


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG ++S  +T+ G ++T G G+YG+LGHG + N  +P  V+ L    +  V+CG  HT
Sbjct: 251 VTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHT 310

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + +   G  VY+FG G  G+LG  NT  +  P+
Sbjct: 311 LALVPSGGRVYSFGLGASGQLGTRNTISQTLPK 343



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVAL 458
           PL       Y    IACG +HS  +T  G + ++G+ D G++GH T  +  ++P+ +  L
Sbjct: 77  PLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFL 136

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
               V  ++CG NH++ +   G+ +Y++G   YG+LG+
Sbjct: 137 VSRTVVQIACGNNHSLALTSCGE-LYSWGSNIYGQLGV 173



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 3/82 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+  +T+NG +Y  GN D+ +LGH   +  K P  +  L    V  ++CG  H+
Sbjct: 41  IACGHRHTLFLTANGQVYACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHS 98

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           + + + G+ + ++GD + G++G
Sbjct: 99  MALTEWGQ-ILSWGDNDCGQVG 119



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 7/115 (6%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNK 67
           IP  +   ++ I+ G+ H +A++  GQ+ +WG+N   Q+G     +  E P+++  L ++
Sbjct: 80  IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSR 139

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPL 122
            + Q++ G +HS A T+     ++ G      L +  P+D+P       N PL L
Sbjct: 140 TVVQIACGNNHSLALTSCG-ELYSWGSNIYGQLGVQSPKDLPH-----SNAPLRL 188



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 28/242 (11%)

Query: 220 RQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGV 279
           R++     SDL+ P    K+K   E A+DAGGV  +    +  +LL     +        
Sbjct: 720 RELQHYSQSDLKKP---LKIKFQDEEAEDAGGVRKEFFMLLLKDLLDPKYSMFKEL---- 772

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
                   R +   D++   +++  +  +G+L G+AI     + LP    ++K ++ +PV
Sbjct: 773 -----EESRLLWFADVTYETENM--YYLIGVLCGLAIYNFTIINLPFPLALYKKLLNKPV 825

Query: 340 TFTDLEDNDTLYAQSLRAIRDI---HLSGVTEANFPEIIPLECFEGASWTGRITPIVTGG 396
             +DL       A SL+A+ D    + S   E NF   I  + F G + T  + P    G
Sbjct: 826 DLSDLRQLSPAEANSLQALLDYDGDNFSDTFELNFE--ISRQVF-GVTQTLSLKP---NG 879

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           + + +T  NR ++ E  +      ++ V    +   F  G + ++  G  +N   PE ++
Sbjct: 880 EDIAVTMENRQEFVELYVDFVINKASEV----HYKAFHKG-FMKVCSGRVINVFQPEELM 934

Query: 457 AL 458
           A+
Sbjct: 935 AV 936



 Score = 42.4 bits (98), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I +  I+ G  H   +S +  VF WG N+  QLGL ++ N   P  + ++    +R V+ 
Sbjct: 194 IPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTC 253

Query: 75  GRSHSAAWT 83
           G  +S   T
Sbjct: 254 GDEYSVFLT 262



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 38/74 (51%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
            + + + + +  ++ G E+ + ++N G VF  G  +  QLG G   N   P++V+ L   
Sbjct: 239 QLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIPRMVIELMGS 298

Query: 68  NIRQVSAGRSHSAA 81
            I QV+ G  H+ A
Sbjct: 299 TITQVACGNRHTLA 312



 Score = 38.5 bits (88), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           LY +G+  +G+LG G   N ++  P ++       V+ ++CG  HT+ +   G+ VYA G
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQ-VYACG 61

Query: 488 DGEYGKLGLGNTGLKPTP 505
           + ++ +LG      +P P
Sbjct: 62  NNDHHQLGHELPTKRPLP 79


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T +G ++TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 366 LACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHT 425

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT 499
           +  ++D GK V++FG G+ G+LG G T
Sbjct: 426 LAYVSDLGK-VFSFGSGKEGQLGNGGT 451



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  ++ +G +Y++G  D+G+LG G T     P  + AL+   VE ++CG +HT
Sbjct: 314 ISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHT 373

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +   G  V+ FG G++G+LG  +T  +  P+
Sbjct: 374 ALLTKDG-LVFTFGAGKHGQLGHNSTQNELRPR 405



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G+Q  +   PQ+V  LS   + Q+SAG
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAG 317

Query: 76  RSHSAA 81
           ++HS A
Sbjct: 318 KAHSMA 323



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 42/73 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I +V IS G  H +A+S +G +++WG N   QLGLG+      P L+ AL N+ +  ++ 
Sbjct: 309 IPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLAC 368

Query: 75  GRSHSAAWTAPPL 87
           G SH+A  T   L
Sbjct: 369 GGSHTALLTKDGL 381



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G+   +  +P+ V  L+ + +  +S G  H
Sbjct: 261 ITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGKAH 320

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  +Y++G  ++G+LGLG+T  K  P
Sbjct: 321 SMALSMSGN-IYSWGRNDFGQLGLGHTDGKDFP 352



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 37/76 (48%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  N  +  ++ G  H   ++  G VF +G     QLG  +  N   P+LV  L+   
Sbjct: 355 IEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNR 414

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 415 VTQIACGRQHTLAYVS 430


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q++P      LQ      IACG   S  V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKV-VVNIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 216 CSMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 248



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 240 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 299

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 300 PTPVVVEKDRIIEIAACHSTHTSA 323



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            VV      +E  +C   HT     +G  VY +G
Sbjct: 302 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 4   TSGRHIP-----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
           T+ + IP       +N  +V+I+ G    +AV +TG+V+ WG N + QLGLG+  N   P
Sbjct: 189 TANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTP 248

Query: 59  QLVLALSNKNIRQVSAGRSHSAAWT 83
             V AL    +++V+ G +H+   T
Sbjct: 249 CRVAALQGIRVQRVACGYAHTLVLT 273



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++++G+  YG+LG+GT  +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +  P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQAIPR 196



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  + +++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L 
Sbjct: 144 HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQ 203

Query: 66  NKNIRQVSAGRSHSAA 81
           NK +  ++ G+  S A
Sbjct: 204 NKVVVNIACGQMCSMA 219



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYR--EPQLVLA 63
           R + +  +  I  +S G+  H++  +  G+VF+WG+N+  QLG G  IN+      +   
Sbjct: 90  RRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGT-INHGLVPSHISTN 148

Query: 64  LSNKNIRQVSAGRSHSAAWTA 84
           LSNK + +V+ G  HS   T+
Sbjct: 149 LSNKQVTEVACGSYHSLVLTS 169


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G Y  G LGHG  ++  VP+RV   L  +HV S+SCG 
Sbjct: 372 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 431

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  ++  G+ ++ FGDG +G LG G+
Sbjct: 432 WHTAVVSSAGQ-LFTFGDGTFGVLGHGD 458



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+AVV+S G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 425 SSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVW 484

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   K  P
Sbjct: 485 HTAAVVEVMVGNSSSSNCSSGK-LFTWGDGDKGRLGHGDKEAKLVP 529



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + AL+  ++E V+CG  HT
Sbjct: 320 IACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHT 379

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             +   G  +Y +GDG Y  G LG GN
Sbjct: 380 CAVTLSGD-LYTWGDGTYNFGLLGHGN 405



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 39/64 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   +YT+G G  GRLGHG T +  +P  V AL    V+S++CG N T
Sbjct: 595 IACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACGTNFT 654

Query: 474 VCIA 477
             I 
Sbjct: 655 AAIC 658



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNH 472
           +ACG   +   T++G++YT G+  YG+LG+  + + K+P RV   L++  VE ++CG  H
Sbjct: 543 VACGHSLTIARTTSGHVYTMGSPVYGQLGNPQS-DGKLPARVEGKLSRSSVEEIACGAYH 601

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +  K + VY +G G  G+LG G+T  K  P
Sbjct: 602 VAVLTSKTE-VYTWGKGANGRLGHGDTDDKNLP 633



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G +H   V+  G++F+WG  S  +LG G   +   PQL+ ALSN NI  V+ 
Sbjct: 315 LDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVAC 374

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 375 GEYHTCAVT 383



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD GRLGHG      VP  V AL + +
Sbjct: 480 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEPN 539

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + T+     G  VY  G   YG+LG
Sbjct: 540 FCQVACGHSLTIARTTSGH-VYTMGSPVYGQLG 571



 Score = 45.4 bits (106), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K ++ ++ G 
Sbjct: 592 VEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACGT 651

Query: 77  SHSAA 81
           + +AA
Sbjct: 652 NFTAA 656



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   VS+ GQ+F +G+ +   LG G++ +   P+ V +L      Q
Sbjct: 419 LEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQ 478

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 479 AACGVWHTAA 488


>gi|328869996|gb|EGG18371.1| putative myb transcription factor [Dictyostelium fasciculatum]
          Length = 1678

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 1/86 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           H+ ++ S G +Y+FG G Y +LGHG T N   P  +V L++ ++  VSC   H++ + D+
Sbjct: 228 HNLLLDSKGKVYSFGFGLYHQLGHGNTNNIHSPSMLVTLDECNIVDVSCSAWHSLVLTDQ 287

Query: 480 GKAVYAFGDGEYGKLGLGNTGLKPTP 505
           G  VY+FG  EYG+LG G+    PTP
Sbjct: 288 GH-VYSFGWNEYGQLGHGDNDSCPTP 312



 Score = 44.7 bits (104), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 2/77 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH--VESVSCGLN 471
           ++C   HS V+T  G++Y+FG  +YG+LGHG   +   P  + +L+ +   ++S+S    
Sbjct: 274 VSCSAWHSLVLTDQGHVYSFGWNEYGQLGHGDNDSCPTPTLIDSLSDLDLIIKSISTSTY 333

Query: 472 HTVCIADKGKAVYAFGD 488
           +++ I  + + +Y   D
Sbjct: 334 NSLFIDQQNRILYCGKD 350


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG ++S  +T+ G ++T G G+YG+LGHG + N  +P  V+ L    +  V+CG  HT
Sbjct: 251 VTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHT 310

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + +   G  VY+FG G  G+LG  NT  +  P+
Sbjct: 311 LALVPSGGRVYSFGLGASGQLGTRNTISQTLPK 343



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVAL 458
           PL       Y    IACG +HS  +T  G + ++G+ D G++GH T  +  ++P+ +  L
Sbjct: 77  PLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFL 136

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
               V  ++CG NH++ +   G+ +Y++G   YG+LG+
Sbjct: 137 VSRTVVQIACGNNHSLALTSCGE-LYSWGSNIYGQLGV 173



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 3/82 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+  +T+NG +Y  GN D+ +LGH   +  K P  +  L    V  ++CG  H+
Sbjct: 41  IACGHRHTLFLTANGQVYACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHS 98

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           + + + G+ + ++GD + G++G
Sbjct: 99  MALTEWGQ-ILSWGDNDCGQVG 119



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 7/115 (6%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNK 67
           IP  +   ++ I+ G+ H +A++  GQ+ +WG+N   Q+G     +  E P+++  L ++
Sbjct: 80  IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSR 139

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPL 122
            + Q++ G +HS A T+     ++ G      L +  P+D+P       N PL L
Sbjct: 140 TVVQIACGNNHSLALTSCG-ELYSWGSNIYGQLGVQSPKDLPH-----SNAPLRL 188



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 28/242 (11%)

Query: 220 RQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGV 279
           R++     SDL+ P    K+K   E A+DAGGV  +    +  +LL     +        
Sbjct: 720 RELQHYSQSDLKKP---LKIKFQDEEAEDAGGVRKEFFMLLLKDLLDPKYSMFKEL---- 772

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
                   R +   D++   +++  +  +G+L G+AI     + LP    ++K ++ +PV
Sbjct: 773 -----EESRVLWFADVTYETENM--YYLIGVLCGLAIYNFTIINLPFPLALYKKLLNKPV 825

Query: 340 TFTDLEDNDTLYAQSLRAIRDI---HLSGVTEANFPEIIPLECFEGASWTGRITPIVTGG 396
             +DL       A SL+A+ D    + S   E NF   I  + F G + T  + P    G
Sbjct: 826 DLSDLRQLSPAEANSLQALLDYDGENFSDTFELNFE--ISRQVF-GVTQTLSLKP---NG 879

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           + + +T  NR ++ E  +      ++ V    +   F  G + ++  G  +N   PE ++
Sbjct: 880 EDIAVTMENRQEFVELYVDFVINKASEV----HYKAFHKG-FMKVCSGRVINVFQPEELM 934

Query: 457 AL 458
           A+
Sbjct: 935 AV 936



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I +  I+ G  H   +S +  VF WG N+  QLGL ++ N   P  + ++    +R V+ 
Sbjct: 194 IPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTC 253

Query: 75  GRSHSAAWT 83
           G  +S   T
Sbjct: 254 GDEYSVFLT 262



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 38/74 (51%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
            + + + + +  ++ G E+ + ++N G VF  G  +  QLG G   N   P++V+ L   
Sbjct: 239 QLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMVIELMGS 298

Query: 68  NIRQVSAGRSHSAA 81
            I QV+ G  H+ A
Sbjct: 299 TITQVACGNRHTLA 312



 Score = 38.5 bits (88), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           LY +G+  +G+LG G   N ++  P ++       V+ ++CG  HT+ +   G+ VYA G
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQ-VYACG 61

Query: 488 DGEYGKLGLGNTGLKPTP 505
           + ++ +LG      +P P
Sbjct: 62  NNDHHQLGHELPTKRPLP 79


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 248 VACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT--GLKPTP 505
           +  ++D GK V++FG G+ G+LG G T   L P P
Sbjct: 308 LAYVSDLGK-VFSFGSGKDGQLGNGGTRDQLMPLP 341



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 47/86 (54%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S T+ + +     + +  IS G  H +A+S +G +++WG N   QLGLG+  +  +P L+
Sbjct: 178 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLI 237

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPL 87
             L N+ +  V+ G SHSA  T   L
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGL 263



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  + G+LG G T +   P  +  L+   VE V+CG +
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  +   G  ++ FG G++G+LG  +T
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNST 280



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G +  +   PQ+V  L+   + Q+SAG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 76  RSHSAA 81
            +HS A
Sbjct: 200 EAHSMA 205



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L  V +  +S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  +Y++G  E G+LGLG+T  K  P
Sbjct: 203 SMALSMSGN-IYSWGKNECGQLGLGHTESKDDP 234


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 248 VACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT--GLKPTP 505
           +  ++D GK V++FG G+ G+LG G T   L P P
Sbjct: 308 LAYVSDLGK-VFSFGSGKDGQLGNGGTRDQLMPLP 341



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 47/86 (54%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S T+ + +     + +  IS G  H +A+S +G +++WG N   QLGLG+  +  +P L+
Sbjct: 178 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLI 237

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPL 87
             L N+ +  V+ G SHSA  T   L
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGL 263



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  + G+LG G T +   P  +  L+   VE V+CG +
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  +   G  ++ FG G++G+LG  +T
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNST 280



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G +  +   PQ+V  L+   + Q+SAG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 76  RSHSAA 81
            +HS A
Sbjct: 200 EAHSMA 205



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L  V +  +S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  +Y++G  E G+LGLG+T  K  P
Sbjct: 203 SMALSMSGN-IYSWGKNECGQLGLGHTESKDDP 234


>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
          Length = 2101

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 12/102 (11%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV---------HVE 464
            IACG++H+A++T + +LYTFG+G+ GRLGHG   +   P  V     +          V 
Sbjct: 1748 IACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVSVGYFTSLIEAEGVDVGGVV 1807

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKPT 504
             VSCG  HT+ +   G  ++ FG GE G+LG G TG  L PT
Sbjct: 1808 EVSCGREHTMAVTASGD-LFGFGWGEAGRLGTGETGSSLYPT 1848



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 415  ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
            +CG +H+  VT++G L+ FG G+ GRLG G T +   P RV  L   ++ +V+CG  HT+
Sbjct: 1810 SCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDLQ--NIAAVACGREHTL 1867

Query: 475  CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             +  KG+ V+AFG G  G+LG G+   +  P
Sbjct: 1868 ALTRKGR-VFAFGAGFGGRLGNGSETDEELP 1897



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            AA+ACG +H+  +T  G ++ FG G  GRLG+G+  + ++P  V  L    + ++  G  
Sbjct: 1857 AAVACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAIDAGEC 1916

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+  ++ +G  V  +G G  G LG G+
Sbjct: 1917 HSCALSTEGD-VLTWGFGSSGALGHGD 1942



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 15/129 (11%)

Query: 382  GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
            GA + GR+       + +P        Y  AAI  G  HS  +++ G + T+G G  G L
Sbjct: 1879 GAGFGGRLGNGSETDEELPFAVQGLEDYRIAAIDAGECHSCALSTEGDVLTWGFGSSGAL 1938

Query: 442  GHGTTMNWKVPERVV--------------ALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            GHG   N   P R+               A     V +++CG  HT+     G A+Y +G
Sbjct: 1939 GHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHTLAATSDG-ALYGWG 1997

Query: 488  DGEYGKLGL 496
            D   G+L +
Sbjct: 1998 DAAAGQLSV 2006



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%)

Query: 16   HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
            +I  ++ G EH LA++  G+VFA+G     +LG G++ +   P  V  L +  I  + AG
Sbjct: 1855 NIAAVACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAIDAG 1914

Query: 76   RSHSAA 81
              HS A
Sbjct: 1915 ECHSCA 1920


>gi|410957218|ref|XP_003985228.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Felis catus]
          Length = 932

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 129 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 188

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 189 LAFVPSSGLIYAFGCGARGQLGTGHT 214



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
          R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 11 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 70

Query: 66 NKNIRQVSAGRSHSAA 81
             + QV+AG +HS A
Sbjct: 71 GIPLAQVAAGGAHSFA 86



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 59  SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV 118

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 119 KLLRTQKVVYISCGEEHTAVLT 140



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 117 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 176

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 177 EVTQIACGRQHTLAF 191



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   + ++G  +T+G   +G+LG G    +   P+RV +L  + +  V+ G  H
Sbjct: 24  VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 83

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 84  SFALSLSG-AVFGWGMNNAGQLGLSDEEDRESP 115



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 75  AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 134

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 135 HTAVLTKSG-GVFTFGAGSCGQLG 157



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 181 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 223


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 248 VACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT--GLKPTP 505
           +  ++D GK V++FG G+ G+LG G T   L P P
Sbjct: 308 LAYVSDLGK-VFSFGSGKDGQLGNGGTRDQLMPLP 341



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)

Query: 6   GRHIPAFKNIHIVD---------ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           GR  P+     IV+         IS G  H +A+S +G +++WG N   QLGLG+  +  
Sbjct: 173 GRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKD 232

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWTAPPL 87
           +P L+  L N+ +  V+ G SHSA  T   L
Sbjct: 233 DPSLIEGLDNQKVEFVACGGSHSALLTQDGL 263



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  + G+LG G T +   P  +  L+   VE V+CG +
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  +   G  ++ FG G++G+LG  +T
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNST 280



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G +  +   PQ+V  L+   + Q+SAG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 76  RSHSAA 81
            +HS A
Sbjct: 200 EAHSMA 205



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L  V +  +S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  +Y++G  E G+LGLG+T  K  P
Sbjct: 203 SMALSMSGN-IYSWGKNECGQLGLGHTESKDDP 234


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V  NG +Y +G    G+
Sbjct: 247 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQ 306

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + V+ V+CG  HT+ + D+G+ VY +G   YG+LG GN  
Sbjct: 307 LGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQ-VYVWGANSYGQLGTGNKS 365

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 366 NQSYPTP 372



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 227 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQM 285

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +V + D G+ VY +G    G+LGLG++G + TP
Sbjct: 286 CSVAVVDNGE-VYVWGYNGNGQLGLGSSGNQSTP 318



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G QS P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 312 SGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSYPT 371

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 372 PVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 405



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 180 HVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 239

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 240 DGE-VFAWGYNNSGQVGSGSTANQPIPR 266



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  ++ G  H L +++ GQV+ WG NS  QLG GN+ N   
Sbjct: 310 GSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSY 369

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V    ++ I   +   +H++A
Sbjct: 370 PTPVAVEKDRIIEIAACHSTHTSA 393



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV + G+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 267 RVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQG 326

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 327 ICVQRVACGYAHTLVLT 343



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK + 
Sbjct: 219 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVV 278

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 279 NIACGQMCSVA 289



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I   S G+  HV+  +  G++F WG+N+ +QLG G   +   P  +   L
Sbjct: 160 RRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTNL 219

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 220 SNKQVIEVACGSYHSLVLTS 239


>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
          Length = 677

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 59/86 (68%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LYTFG  + G+LG  +   +N + P+RV+ +    ++ V+CG  
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGG 291

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 292 HTVVLTE--KVVYAFGLGQFGQLGLG 315



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNH 136

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 137 TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 167



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +Y FG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 286 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENH 344

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  + D G  +Y FGDG +GKLGLG
Sbjct: 345 TALMTDIG-LMYTFGDGRHGKLGLG 368



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISW--ISCGYYHS 240

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 241 AFVTTDGE-LYTFGEPENGKLGLPN 264



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + A
Sbjct: 62  ENIPSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKA 121

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L  + ++  + GR+H+   T
Sbjct: 122 LKPEKVKLAACGRNHTLVST 141



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N   P       K  V+ ++CG  
Sbjct: 338 ISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGC 397

Query: 472 HTVCIA 477
           H +  A
Sbjct: 398 HMLVFA 403



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ--INYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ  IN+R PQ VL + +K I QV+ G  
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVI-QVACGGG 291

Query: 78  HSAAWT 83
           H+   T
Sbjct: 292 HTVVLT 297



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL N+ N   P  V     K I  +S G 
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCGY 237

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 238 YHSAFVT 244



 Score = 42.4 bits (98), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 15/83 (18%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN--------QINYREPQL 60
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+        QI +  P  
Sbjct: 119 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSD 178

Query: 61  VLALSNKNIRQVSAGRSHSAAWT 83
           +       I+Q+SAG + SAA T
Sbjct: 179 I-------IKQLSAGANTSAALT 194


>gi|303287370|ref|XP_003062974.1| mastigoneme-like protein [Micromonas pusilla CCMP1545]
 gi|226455610|gb|EEH52913.1| mastigoneme-like protein [Micromonas pusilla CCMP1545]
          Length = 3898

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 1/77 (1%)

Query: 420  HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
            H A VT +G ++T+G   +G+LGHG  +   VP+RV AL  V++ +V+ GL+HTV I D 
Sbjct: 2795 HVAAVTRDGRVWTWGGNSHGQLGHGDRITRFVPKRVDALKHVNITAVAAGLHHTVAICDL 2854

Query: 480  GKAVYAFGDGEYGKLGL 496
            G+ VYA+G  E+G+LGL
Sbjct: 2855 GE-VYAWGSNEFGELGL 2870



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I A + + +V +S    HV AV+  G+V+ WG NS  QLG G++I    P+ V AL + N
Sbjct: 2778 IAALEGVDVVQVSASRHHVAAVTRDGRVWTWGGNSHGQLGHGDRITRFVPKRVDALKHVN 2837

Query: 69   IRQVSAGRSHSAA 81
            I  V+AG  H+ A
Sbjct: 2838 ITAVAAGLHHTVA 2850



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 7/65 (10%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + + A K+++I  ++ G  H +A+ + G+V+AWG+N   +LGL       +PQ    L  
Sbjct: 2828 KRVDALKHVNITAVAAGLHHTVAICDLGEVYAWGSNEFGELGL-------DPQSAFELEE 2880

Query: 67   KNIRQ 71
             N  +
Sbjct: 2881 NNANE 2885



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 11/98 (11%)

Query: 411  EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN----------WKVPERVVALNK 460
            E A+    +      + G +YTFG+G  G+LGHG                VP  + AL  
Sbjct: 2724 EDALGAAKRVETAAVAPGRVYTFGHGPVGQLGHGVGRQPGREGLDDHRVMVPTPIAALEG 2783

Query: 461  VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            V V  VS   +H   +   G+ V+ +G   +G+LG G+
Sbjct: 2784 VDVVQVSASRHHVAAVTRDGR-VWTWGGNSHGQLGHGD 2820



 Score = 39.3 bits (90), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 27/37 (72%)

Query: 12   FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG 48
            F  + +V ++VG  H +A+S+ G +++WG+N++ QLG
Sbjct: 2547 FDRVDVVGVAVGEFHTVALSSEGVMWSWGSNANGQLG 2583


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 248 VACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT--GLKPTP 505
           +  ++D GK V++FG G+ G+LG G T   L P P
Sbjct: 308 LAYVSDLGK-VFSFGSGKDGQLGNGGTRDQLMPLP 341



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  ++G+LG G T +   P  +  L+   VE V+CG +
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGS 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  +   G  ++ FG G++G+LG  +T
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNST 280



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 9/91 (9%)

Query: 6   GRHIPAFKNIHIVD---------ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           GR  P+     IV+         IS G  H +A+S +G +++WG N   QLGLG+  +  
Sbjct: 173 GRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD 232

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWTAPPL 87
            P L+  L N+ +  V+ G SHSA  T   L
Sbjct: 233 YPSLIEGLDNQKVEFVACGGSHSALLTQDGL 263



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 6/82 (7%)

Query: 5   SGRHIPAFKNI----HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQ 59
           S +H+  F+N+     I+ I+ G  H LA+S  G++FAWG N   QLG+G +  +   PQ
Sbjct: 125 SMKHL-RFENVLQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQ 183

Query: 60  LVLALSNKNIRQVSAGRSHSAA 81
           +V  L+   + Q+SAG +HS A
Sbjct: 184 IVEHLAGVPLAQISAGEAHSMA 205



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 401 LTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVAL 458
           L F N LQ  +   I CG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L
Sbjct: 129 LRFENVLQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL 188

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             V +  +S G  H++ ++  G  +Y++G  E+G+LGLG+T  K  P
Sbjct: 189 AGVPLAQISAGEAHSMALSMSGN-IYSWGKNEFGQLGLGHTESKDYP 234


>gi|351696843|gb|EHA99761.1| Putative E3 ubiquitin-protein ligase HECTD3 [Heterocephalus glaber]
          Length = 815

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL  G+      +P  VRT N  
Sbjct: 471 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPGSADTPVPLPFFVRTANQG 530

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S Q    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 531 NGTGEARDMYVPNP----SCQDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 586

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + G+ +  F      E  F       ++  ++ GG 
Sbjct: 587 SWSKDFPAVDSVLVKLLEV-----MEGMDKETFEFKFGKELTFTTVLSDQQVVELIPGGT 641

Query: 398 SVPLTFANRLQYYE 411
            + + + +R ++ +
Sbjct: 642 GITVGYEDRSRFIQ 655


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 4/101 (3%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           V L  A ++ Y    I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L
Sbjct: 236 VKLLRAQKVVY----ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
               V  ++CG  HT+        +YAFG G  G+LG G+T
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADEHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT  +  VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRAQKVVYISCGEEHTAVLT 258



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          + +++ G +H + +   G+V+  G N+  QLG   + N  +P+ + AL++++I  V+ G 
Sbjct: 36 VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADEHIVHVACGE 93

Query: 77 SHSAA 81
          SHS A
Sbjct: 94 SHSLA 98


>gi|402869930|ref|XP_003898996.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Papio anubis]
          Length = 932

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 129 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 188

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 189 LAFVPSSGLIYAFGCGARGQLGTGHT 214



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
          R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 11 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 70

Query: 66 NKNIRQVSAGRSHSAA 81
             + QV+AG +HS A
Sbjct: 71 GIPLAQVAAGGAHSFA 86



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 59  SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 118

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 119 KLLRTQKVVYISCGEEHTAVLT 140



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 117 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 176

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 177 EVTQIACGRQHTLAF 191



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   + ++G  +T+G   +G+LG G    +   P+RV +L  + +  V+ G  H
Sbjct: 24  VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 83

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 84  SFALSLSG-AVFGWGMNNAGQLGLSDEKDRESP 115



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 75  AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 135 HTAVLTKSG-GVFTFGAGSCGQLG 157



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 181 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 223


>gi|332233512|ref|XP_003265946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Nomascus leucogenys]
          Length = 932

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 129 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 188

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 189 LAFVPSSGLIYAFGCGARGQLGTGHT 214



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
          R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 11 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 70

Query: 66 NKNIRQVSAGRSHSAA 81
             + QV+AG +HS A
Sbjct: 71 GIPLAQVAAGGAHSFA 86



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 59  SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 118

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 119 KLLRTQKVVYISCGEEHTAVLT 140



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 117 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 176

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 177 EVTQIACGRQHTLAF 191



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   + ++G  +T+G   +G+LG G    +   P+RV +L  + +  V+ G  H
Sbjct: 24  VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 83

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 84  SFALSLSG-AVFGWGMNNAGQLGLSDEKDRESP 115



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 75  AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 135 HTAVLTKSG-GVFTFGAGSCGQLG 157



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 181 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 223


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA RL      I+CG +H+A+VT  G +Y++G    GRLGHG   +   P+ + AL+
Sbjct: 103 PLEFAVRLDVQN--ISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALS 160

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +GDG  ++G LG GN
Sbjct: 161 HMNIELVACGEYHTCAVTLSGD-LYTWGDGTFKFGLLGHGN 200



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G   +G LGHG  ++  VP+ V   L  +HV S+SCG 
Sbjct: 167 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGP 226

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 227 WHTALVTSAGQ-LFTFGDGSFGVLGHGD 253



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+A+VTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 220 SSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVW 279

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   K  P
Sbjct: 280 HTAAVVEVMAGNSSSSNCSSGK-IFTWGDGDKGRLGHGDKEAKLVP 324



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+ T  +  +P RV   
Sbjct: 323 VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN-TQADGMLPVRVEGK 381

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE +SCG  H   +  + + VY +G G  G+LG G+T  K TP
Sbjct: 382 LHKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDKNTP 428



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 399 VPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P+    +L + +   I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V A
Sbjct: 374 LPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLVEA 433

Query: 458 LNKVHVESVSCGLNHTVCIA 477
           L    V SV CG+N T  I 
Sbjct: 434 LKDKQVRSVVCGINFTAAIC 453



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS G  H   V+  G++++WG  S  +LG G   +  +P+L+ ALS+ NI  V+ 
Sbjct: 110 LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVAC 169

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 170 GEYHTCAVT 178



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG      VP  V AL + +
Sbjct: 275 ACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 334

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG   TV +   G  VY  G   YG+LG
Sbjct: 335 FCQVACGHCLTVALTTSGH-VYTMGSAVYGQLG 366



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K +R V  G 
Sbjct: 387 VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSVVCGI 446

Query: 77  SHSAA 81
           + +AA
Sbjct: 447 NFTAA 451



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 214 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVR 273

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 274 AACGVWHTAA 283


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           IACG  HSA +TS+G LYT+G G+YGRLGHG       P+ V  L    V  V+CG    
Sbjct: 142 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 201

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            T+ + D+G  V+++GDG++GKLG G +     PQ
Sbjct: 202 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 235



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 89/160 (55%), Gaps = 9/160 (5%)

Query: 351 YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
           ++++L A+  + ++G +++ F   +  + +  G +  GR+   ++ G +VP+    T  +
Sbjct: 23  FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 81

Query: 406 RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
                + A+  G +H+  +T +G ++ +G GD G+LGH + MN   P  + AL    +  
Sbjct: 82  SYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 141

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
           ++CG +H+  +   G+ +Y +G GEYG+LG G+  T LKP
Sbjct: 142 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 180



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 1/82 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 248 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 307

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           + + D G+ VYA+GD ++G+ G
Sbjct: 308 LAVTDSGQ-VYAWGDNDHGQQG 328



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)

Query: 7   RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           R I A  +  +  ++V  G  H  A++  G+VF WG   D +LG  +++N  +P+L+ AL
Sbjct: 75  RQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEAL 134

Query: 65  SNKNIRQVSAGRSHSAAWTAP 85
             K IR ++ G SHSAA T+ 
Sbjct: 135 KTKRIRDIACGSSHSAALTSS 155



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 414 IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 194 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            ++ +   G  V+ +G G+Y +LG G+      PQ
Sbjct: 254 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 287



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3   GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 227 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 284

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
           +PQ+V  L  K I  V+ G  H  A T
Sbjct: 285 KPQVVEGLRGKKIVHVAVGALHCLAVT 311



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I A K   I DI+ G+ H  A++++G+++ WG     +LG G+     +P++V  L  
Sbjct: 129 RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG 188

Query: 67  KNIRQVSAG 75
             + QV+ G
Sbjct: 189 HRVIQVACG 197



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG 48
           +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G
Sbjct: 289 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 328


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V+ +G LYT+G   YG+LGHG   +  +P +V AL + ++  VS G  HT
Sbjct: 219 VACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHT 278

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V + + GK +Y +G  ++G++G G+     +PQ
Sbjct: 279 VALTEAGK-LYGWGWNKFGQVGSGDVDDHTSPQ 310



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   VT++G +Y++G    G+LG G T +  VP +++A   V V+ ++ G  HT
Sbjct: 115 IACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHT 174

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + D GK +Y +G G YG LGLG+ G +  P
Sbjct: 175 AAVTDSGK-LYGWGWGRYGNLGLGDRGDRMLP 205



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+   ++    +Y++G GD+GRLGHG + +  VP  + AL  + +  ++CG +H
Sbjct: 62  VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSH 121

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +   G+ VY++G  + G+LGLG+T
Sbjct: 122 CLAVTADGE-VYSWGRNQNGQLGLGDT 147



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G +H+A VT +G LY +G G YG LG G   +  +P  V A+    +  V+CG  HT
Sbjct: 167 LAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHT 226

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + ++  GK +Y +G  +YG+LG G+
Sbjct: 227 IAVSQSGK-LYTYGWSKYGQLGHGD 250



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 50/86 (58%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G  H+  + S   + +FG G+ G+LGHG   +  +P  + ALN   +  V+CG +HT
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHT 69

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
              +     +Y++G G++G+LG GN+
Sbjct: 70  TAYSATRLTIYSWGWGDFGRLGHGNS 95



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 44/73 (60%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A + + I  I+ G  H LAV+  G+V++WG N + QLGLG+  +   P  +LA    +
Sbjct: 104 IKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS 163

Query: 69  IRQVSAGRSHSAA 81
           ++ ++AG  H+AA
Sbjct: 164 VKMLAAGAEHTAA 176



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VA 457
           +P   A   ++    ++ G++H+  +T  G LY +G   +G++G G   +   P+ + + 
Sbjct: 256 LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIP 315

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
                V  VSCG  HTV + DK   VY++G G  G+LG G+   +  P+
Sbjct: 316 GQHQRVVQVSCGWRHTVAVTDKNN-VYSWGRGTSGQLGHGDAVDRSAPK 363



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +PA  +  +  ++ G  H +AVS +G+++ +G +   QLG G+  ++  P  V AL+  N
Sbjct: 208 VPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFN 267

Query: 69  IRQVSAGRSHSAAWT 83
           I QVS G  H+ A T
Sbjct: 268 ITQVSGGWRHTVALT 282



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSN 66
            + A    +I  +S G  H +A++  G+++ WG N   Q+G G+  ++  PQL+ +   +
Sbjct: 259 QVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQH 318

Query: 67  KNIRQVSAGRSHSAA 81
           + + QVS G  H+ A
Sbjct: 319 QRVVQVSCGWRHTVA 333



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 41/71 (57%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
           AF+ + +  ++ G EH  AV+++G+++ WG      LGLG++ +   P  V A+ ++ + 
Sbjct: 158 AFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMC 217

Query: 71  QVSAGRSHSAA 81
            V+ G  H+ A
Sbjct: 218 MVACGWRHTIA 228



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 2/102 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTG-QVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           R I A  +  I  ++ G +H  A S T   +++WG     +LG GN  +   P  + AL 
Sbjct: 49  RIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQ 108

Query: 66  NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
              IRQ++ G SH  A TA     ++ G   +  L LG   D
Sbjct: 109 GLEIRQIACGDSHCLAVTADG-EVYSWGRNQNGQLGLGDTDD 149



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 30/46 (65%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           ++CG++H+  VT    +Y++G G  G+LGHG  ++   P+ + AL+
Sbjct: 324 VSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALS 369



 Score = 42.0 bits (97), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           +V +S G  H +AV++   V++WG  +  QLG G+ ++   P+ + ALS
Sbjct: 321 VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALS 369


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 326 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 385

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 386 LAFVPSSGLIYAFGCGARGQLGTGHT 411



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 118 VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGESHS 175

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 176 LALSDRGQ-LFSWGAGSDGQLGLMTT 200



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 150 EGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 209

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 210 IQKLNQQTILQVSCGNWHCLALAA 233



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 208 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 267

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 268 GIPLAQVAAGGAHSFA 283



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 168 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 227

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 228 CLALAADGQ-FFTWGKNSHGQLGLG 251



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 256 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV 315

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 316 KLLRTQKVVYISCGEEHTAVLT 337



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 314 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 373

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 374 EVTQIACGRQHTLAF 388



 Score = 45.8 bits (107), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 272 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 331

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 332 HTAVLTKSG-GVFTFGAGSCGQLG 354



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 378 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 432


>gi|359081977|ref|XP_003588239.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like [Bos
           taurus]
          Length = 338

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT+ G LYTFG  + G+LG    +  N KVP+ V  +++  V  V+CG  
Sbjct: 101 ISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISE-KVIQVACGGG 159

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  KAVY FG G++G+LGLG
Sbjct: 160 HTVVLTE--KAVYTFGLGQFGQLGLG 183



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT T     P+ + ++    +  V CG NH
Sbjct: 154 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENH 212

Query: 473 TVCI 476
           T  I
Sbjct: 213 TALI 216



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 3/73 (4%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   P  V     K
Sbjct: 39  ISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNICVPHQVTI--GK 96

Query: 68  NIRQVSAGRSHSA 80
            I  +S G  HSA
Sbjct: 97  PISWISCGYYHSA 109


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
           distachyon]
          Length = 1023

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 11/104 (10%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           + IACG  H+A++TS+G L+T+G+G +G LGHG       P+ V +L  + V+SV+CG  
Sbjct: 372 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSVACGPW 431

Query: 472 HTV----------CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT           C A  GK ++ +GD + GKLG  +  +K  P
Sbjct: 432 HTAAVVEVTSSFNCNAPSGK-LFTWGDADRGKLGHADKKIKLVP 474



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 43/70 (61%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            KN  + +IS G+ HV  ++  GQVF WG  +D QLGLG+  N   P LV AL  ++++ 
Sbjct: 532 LKNEFVREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHVQS 591

Query: 72  VSAGRSHSAA 81
           ++ G + SAA
Sbjct: 592 IACGSNFSAA 601



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IACG  H+A+VT  G ++++GN     LGH    +   P+ V AL  VHV++V+ G  H
Sbjct: 266 SIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLVEALASVHVKAVAFGSKH 325

Query: 473 TVCIADKGKAVYAFGDGEYGKLGL 496
           T  +   G+ +  + +G + +LGL
Sbjct: 326 TCAVTVSGE-LLEWSEGAH-RLGL 347



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 1/103 (0%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+S  G++      G+S+          +   I+ G  H AV+T  G ++T+G G  G+L
Sbjct: 508 GSSKHGQLGNPHADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQVFTWGKGADGQL 567

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA-DKGKAV 483
           G G   N   P  V AL   HV+S++CG N +  +   KG +V
Sbjct: 568 GLGDYDNRSSPTLVEALQGRHVQSIACGSNFSAAVCLHKGMSV 610



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 413 AIACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ++ACG  H+A V            +G L+T+G+ D G+LGH       VP  V  L    
Sbjct: 425 SVACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYD 484

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              VSCG   TV +   G  V+  G  ++G+LG
Sbjct: 485 FLQVSCGAALTVVLTSTG-VVFTIGSSKHGQLG 516



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG   + V+TS G ++T G+  +G+LG+       +      L    V  +S G +H 
Sbjct: 488 VSCGAALTVVLTSTGVVFTIGSSKHGQLGNPHADGESICTVEGTLKNEFVREISSGSSHV 547

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             +  KG+ V+ +G G  G+LGLG+   + +P
Sbjct: 548 AVLTLKGQ-VFTWGKGADGQLGLGDYDNRSSP 578



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN--YREPQLVLAL 64
           R + +   + +  I+ G  H   V+  G+VF+WGN S     LG+QIN     P+LV AL
Sbjct: 254 RLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRT--LGHQINDSVSCPKLVEAL 311

Query: 65  SNKNIRQVSAGRSHSAAWT 83
           ++ +++ V+ G  H+ A T
Sbjct: 312 ASVHVKAVAFGSKHTCAVT 330



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCG 469
           A+A G KH+  VT +G L  +  G +  G L +    N   P ++   ++ + V  ++CG
Sbjct: 318 AVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACG 377

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             HT  I   G+ ++ +GDG +G LG G+
Sbjct: 378 EWHTAIITSSGQ-LFTYGDGTFGVLGHGD 405


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 294 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 353

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 354 LAFVPSSGLIYAFGCGARGQLGTGHT 379



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   ++  V+CG +H+
Sbjct: 86  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQNIVHVACGESHS 143

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 144 LALSDRGQ-LFSWGAGSDGQLGLMTT 168



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + +IV ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 118 EGNKPEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 177

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 178 IQKLNQQTILQVSCGNWHCLALAA 201



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 176 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 235

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 236 GIPLAQVAAGGAHSFA 251



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 136 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 195

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 196 CLALAADGQ-FFTWGKNSHGQLGLG 219



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VFAWG N+  QLGL ++ +   P  V
Sbjct: 224 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHV 283

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 284 KLLRTQKVVYISCGEEHTAVLT 305



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 282 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 341

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 342 EVTQIACGRQHTLAF 356



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   + ++G  +T+G   +G+LG G    +   P+RV +L  + +  V+ G  H
Sbjct: 189 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 248

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+A+G    G+LGL +   + +P
Sbjct: 249 SFALSLSG-AVFAWGMNNAGQLGLSDEEDRESP 280



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 240 AQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 299

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 300 HTAVLTKSG-GVFTFGAGSCGQLG 322



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H
Sbjct: 346 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAH 395



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +++ G  H + +   G+V+  G N+  QLG   + N  +P+ + AL+++NI  V+ G 
Sbjct: 83  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQNIVHVACGE 140

Query: 77  SHSAA 81
           SHS A
Sbjct: 141 SHSLA 145


>gi|410110896|ref|NP_001258531.1| probable E3 ubiquitin-protein ligase HERC3 isoform 2 [Homo sapiens]
 gi|397480081|ref|XP_003811324.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pan paniscus]
 gi|426344935|ref|XP_004039159.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Gorilla gorilla gorilla]
 gi|194382994|dbj|BAG59053.1| unnamed protein product [Homo sapiens]
          Length = 932

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 129 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 188

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 189 LAFVPSSGLIYAFGCGARGQLGTGHT 214



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
          R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 11 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 70

Query: 66 NKNIRQVSAGRSHSAA 81
             + QV+AG +HS A
Sbjct: 71 GIPLAQVAAGGAHSFA 86



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 59  SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 118

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 119 KLLRTQKVVYISCGEEHTAVLT 140



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 117 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 176

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 177 EVTQIACGRQHTLAF 191



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   + ++G  +T+G   +G+LG G    +   P+RV +L  + +  V+ G  H
Sbjct: 24  VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 83

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 84  SFALSLSG-AVFGWGMNNAGQLGLSDEKDRESP 115



 Score = 45.8 bits (107), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 75  AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 135 HTAVLTKSG-GVFTFGAGSCGQLG 157



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 181 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 223


>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
           [Ornithorhynchus anatinus]
          Length = 721

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P    + LQ   A  IACG   S  V  +G +Y +G    G+
Sbjct: 347 GYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQ 406

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + V+ V+CG  HT+ + D+G+ +YA+G   YG+LG GN  
Sbjct: 407 LGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQ-LYAWGANSYGQLGTGNKS 465

Query: 501 LKPTP 505
            +  P
Sbjct: 466 NQSYP 470



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G +Y +G  + G++G G+T N  +P RV +   NK+   +++CG  
Sbjct: 327 VACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKI-ATNIACGQM 385

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ VY +G    G+LGLG++G +PTP
Sbjct: 386 CSMAVVESGE-VYVWGYNGNGQLGLGSSGNQPTP 418



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 4/89 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H  V T+ G +YT+G+  Y +LG+GTT +  +P  V    +NK  VE V+CG +H++ + 
Sbjct: 280 HVVVATAEGEVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVE-VACGSHHSLVLT 338

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             G+ VYA+G    G++G G+T  +P P+
Sbjct: 339 SDGE-VYAWGYNNSGQVGSGSTANQPIPR 366



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  ++ G  H L +++ GQ++AWG NS  QLG GN+ N   
Sbjct: 410 GSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQSY 469

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V    ++ I   +   +H++A
Sbjct: 470 PIPVPVEKDRIIEIAACHSAHTSA 493



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 40/77 (51%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N    +I+ G    +AV  +G+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 367 RVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 426

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 427 IRVQRVTCGYAHTLVLT 443



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 39/94 (41%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         + CG+ H+ V+T  G LY +G   YG+LG G   N   P 
Sbjct: 412 SGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQSYPI 471

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +   VY +G
Sbjct: 472 PVPVEKDRIIEIAACHSAHTSAAKTQSGHVYMWG 505



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQV 72
           N  +V+++ G+ H L +++ G+V+AWG N+  Q+G G+  N   P+ V + L NK    +
Sbjct: 321 NKKVVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNI 380

Query: 73  SAGRSHSAA 81
           + G+  S A
Sbjct: 381 ACGQMCSMA 389



 Score = 38.5 bits (88), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGT-EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R I +     I  +S G+  HV+  +  G+V+ WG+N+ +QLG G   +   P  +   L
Sbjct: 260 RRIDSLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNHGLIPCHVSTNL 319

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
            NK + +V+ G  HS   T+
Sbjct: 320 VNKKVVEVACGSHHSLVLTS 339


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 12/104 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           + ++CG  H+A++TS+G LYTFG+G +G LGHG   +   P+ V +L  +   SVSCG+ 
Sbjct: 188 STVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVW 247

Query: 472 HTVCI---------ADKGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           HT  +         A  GK ++ +GDG+  +LG G+  + LKPT
Sbjct: 248 HTAAVVEVIISQSNASSGK-LFTWGDGDKYRLGHGDRSSKLKPT 290



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           IACG  H+  VT+ G LYT+G+G +  G LGHG+ ++  +P+RV   L+ + V +VSCG 
Sbjct: 135 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTVSCGT 194

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  I   G+ +Y FGDG +G LG GN      P+
Sbjct: 195 WHTALITSSGQ-LYTFGDGTFGVLGHGNRASCSYPK 229



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG KH+A+VT    ++T+G    GRLGHGT  N   P  V +L+  +VE ++CG  HT
Sbjct: 83  VACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHT 142

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             +   G  +Y +GDG +  G LG G+
Sbjct: 143 CAVTATGD-LYTWGDGTHNAGLLGHGS 168



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H AV+T+ G +YT+G G  GRLGHG   + KVP  V AL    V+ V+CG + T
Sbjct: 355 VACGSYHVAVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSFT 414

Query: 474 VCIA 477
             I 
Sbjct: 415 AAIC 418



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 45/65 (69%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V+++ G+ HV  ++N G+V+ WG  ++ +LG G+  + + P LV AL ++++++V+ G 
Sbjct: 352 VVEVACGSYHVAVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGS 411

Query: 77  SHSAA 81
           S +AA
Sbjct: 412 SFTAA 416



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G +H   V+   +VF WG     +LG G   N  +P+LV +LS  N+  ++ G  H+
Sbjct: 83  VACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHT 142

Query: 80  AAWTA 84
            A TA
Sbjct: 143 CAVTA 147



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 413 AIACGFKHSAVV---------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +++CG  H+A V          S+G L+T+G+GD  RLGHG   +   P  + +L   + 
Sbjct: 241 SVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNF 300

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              +CG   T+ +   G  ++  G   YG+LG
Sbjct: 301 HKAACGHTLTIGLTTSGH-IFTVGSSVYGQLG 331



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-L 458
           P    + + Y     ACG   +  +T++G+++T G+  YG+LG+    + + P  V   L
Sbjct: 289 PTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSSVYGQLGNPNN-DGRYPRLVEEQL 347

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               V  V+CG  H   + + G+ VY +G G  G+LG G+   +  P
Sbjct: 348 GGGGVVEVACGSYHVAVLTNAGE-VYTWGKGANGRLGHGDIADRKVP 393


>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 551

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ   A  IACG   S  V + G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LKPTP 505
            +  P
Sbjct: 296 NQSYP 300



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAV-NIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ VY +G    G+LGLG++G +PTP
Sbjct: 216 CSMAVVNTGE-VYVWGYNGNGQLGLGSSGNQPTP 248



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 240 GSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 299

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 300 PAPVIVEKDRIIEIAACHSAHTSA 323



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQPIPR 196



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N   V+I+ G    +AV NTG+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 197 RVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 47/106 (44%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G +  G++    +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+L
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL 289

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G G   N   P  V+      +E  +C   HT     +G  VY +G
Sbjct: 290 GTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  + +++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L 
Sbjct: 144 HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQ 203

Query: 66  NKNIRQVSAGRSHSAA 81
           NK    ++ G+  S A
Sbjct: 204 NKVAVNIACGQMCSMA 219



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVTEVACGSYHSLVLTS 169


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 12/105 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +++ACG  H+A+V+S G L+T+G+G +G LGHG   ++  P+ V +LN + V S +CG  
Sbjct: 414 SSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSW 473

Query: 472 HTVCIAD-----------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  I +            GK ++ +GDG+ G+LG  + G K  P
Sbjct: 474 HTAAIVEVMFDRFRYNSASGK-LFTWGDGDEGRLGHVDNGNKIVP 517



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G KH+A+VT  G ++ +G G +GRLG    M+   P+ V +LN +HV++V+CG  HT
Sbjct: 309 IALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLNGLHVKTVACGEYHT 368

Query: 474 VCIADKGKAVYAFGD 488
             + D G+ VY +G+
Sbjct: 369 CALTDSGE-VYTWGN 382



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVV-----------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           + ACG  H+A +           +++G L+T+G+GD GRLGH    N  VP RV  L   
Sbjct: 467 SAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLVDY 526

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               VSCG   TV + + GK V+A G  +YG+LG
Sbjct: 527 DFVQVSCGRMLTVALTNMGK-VFAMGSAKYGQLG 559



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 5/160 (3%)

Query: 350 LYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQY 409
           L + ++  + +I L G   A   +   + C+    W GR+   +    S P    +    
Sbjct: 298 LESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKW-GRLGQKIDMDISSPKIVDSLNGL 356

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGR--LGHGTTMNWKVPERVVA-LNKVHVESV 466
           +   +ACG  H+  +T +G +YT+GN       L  G T +  +P+R+   L+ + + SV
Sbjct: 357 HVKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISSV 416

Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +CG  HT  ++  G+ ++ +GDG +G LG G+     +P+
Sbjct: 417 ACGEWHTAIVSSCGR-LFTYGDGTFGVLGHGDLRSYSSPK 455



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 10/123 (8%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
           GR+  +  G + VP      + Y    ++CG   +  +T+ G ++  G+  YG+LG    
Sbjct: 504 GRLGHVDNGNKIVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLG---- 559

Query: 447 MNWKVPERVV----ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
            N    ++VV     L +  V+ +S G  H   +   G +VY +G GE G+LGLG+T  +
Sbjct: 560 -NPHARDKVVIVEGQLKQEFVKVISTGSYHVAVLTSAG-SVYTWGRGEIGQLGLGDTEDR 617

Query: 503 PTP 505
            TP
Sbjct: 618 YTP 620



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 39/70 (55%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           Q +   I+ G  H AV+TS G +YT+G G+ G+LG G T +   P  V AL    V +++
Sbjct: 576 QEFVKVISTGSYHVAVLTSAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTIT 635

Query: 468 CGLNHTVCIA 477
           CG + T  I 
Sbjct: 636 CGPSFTAAIC 645



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           IS G+ HV  +++ G V+ WG     QLGLG+  +   P  V AL ++ +  ++ G S +
Sbjct: 582 ISTGSYHVAVLTSAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFT 641

Query: 80  AA 81
           AA
Sbjct: 642 AA 643



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
           A  ++H  +I++G +H   V+  G+VF WG     +LG    ++   P++V +L+  +++
Sbjct: 302 AMLDVH--NIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLNGLHVK 359

Query: 71  QVSAGRSHSAAWT 83
            V+ G  H+ A T
Sbjct: 360 TVACGEYHTCALT 372


>gi|321452330|gb|EFX63739.1| hypothetical protein DAPPUDRAFT_267802 [Daphnia pulex]
          Length = 727

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 51/93 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T +G + TFG G YG+LGH T+ N  +P +V+ L    V  + CG  HT
Sbjct: 138 IRCGMDHTAALTRDGGVLTFGEGMYGQLGHYTSANEMLPRKVLELMGTTVTQICCGRCHT 197

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +        +YAFG G  G+LG  +T    +P 
Sbjct: 198 LAFVPSKDRIYAFGLGGSGQLGTKSTANVNSPH 230



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 1/55 (1%)

Query: 16 HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALSNKNI 69
          +I  ++ G +H LA +  G++FAWG+NS+ QLGL  + +    P++V +L+ K +
Sbjct: 37 NITQVACGAQHTLAQNEWGEIFAWGSNSNGQLGLNVEESMIPTPKMVKSLATKQM 91



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 438 YGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           +G+LG G T++   P ++ +L    V  + CG++HT  +   G  V  FG+G YG+LG
Sbjct: 110 FGQLGLGDTVDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDG-GVLTFGEGMYGQLG 166


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQL 60
            G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + ++D+G+ ++++G G  G+LGL
Sbjct: 97  LALSDQGQ-LFSWGAGSDGQLGL 118



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV AG +HS A
Sbjct: 189 GIPLAQVVAGGAHSFA 204



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  T  +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGRNSHGQLGLG 172



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 41/82 (50%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  +  G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   + ++G  +T+G   +G+LG G    +   P+RV +L  + +  V  G  H
Sbjct: 142 VSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 202 SFALSLSG-AVFGWGMNNAGQLGLSDEKDRESP 233



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +  G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDQGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  VT+ G LYT+G+G +  G LGHGT ++  +P+R+  AL    V  VSCG 
Sbjct: 149 VACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGT 208

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  I   G+ ++ FGDG +G LG GN    P P+
Sbjct: 209 WHTALITSTGQ-LFTFGDGTFGVLGHGNRESIPCPR 243



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 15/120 (12%)

Query: 399 VPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P   +  L+  + A ++CG  H+A++TS G L+TFG+G +G LGHG   +   P  V +
Sbjct: 188 IPKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESIPCPREVES 247

Query: 458 LNKVHVESVSCGLNHTVCIAD-----------KGKAVYAFGDGEYGKLGLGNTG--LKPT 504
           L+ +   +V+CG+ HT  + +            GK ++ +GDG+  +LG G+    +KPT
Sbjct: 248 LSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGK-LFTWGDGDKHRLGHGDKEPRVKPT 306



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG KH+A+VT NG ++T+G    GRLGHG+  ++  P  V +L   +V+ V+CG  HT
Sbjct: 97  VDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHT 156

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             +   G+ +Y +GDG +  G LG G
Sbjct: 157 CAVTTAGE-LYTWGDGTHNIGLLGHG 181



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 36/66 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H AV+T    ++T+G G  GRLGHG   + K+P  V  L    V  ++CG N T
Sbjct: 370 VACGSYHVAVLTVKSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACGANFT 429

Query: 474 VCIADK 479
             I  +
Sbjct: 430 AAICQR 435



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  +  G +H   V+  G+VF WG  S  +LG G++ +Y  P LV +L+  N+  V+ 
Sbjct: 92  LDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVESLAVSNVDFVAC 151

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 152 GEFHTCAVT 160



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVVTS-----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A+ACG  H+A V             +G L+T+G+GD  RLGHG       P  V +L   
Sbjct: 255 AVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDY 314

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               ++CG + TV +   G+ V+  G+  YG+LG
Sbjct: 315 DFHRIACGHSLTVGLTTSGQ-VWGMGNTVYGQLG 347



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 2/106 (1%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           P   A+ + Y    IACG   +  +T++G ++  GN  YG+LG+  + + K+P  V  + 
Sbjct: 305 PTCVASLIDYDFHRIACGHSLTVGLTTSGQVWGMGNTVYGQLGNPRS-DGKLPCLVEDIM 363

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             +V  V+CG  H   +  K + V+ +G G  G+LG G+   +  P
Sbjct: 364 GENVVQVACGSYHVAVLTVKSE-VFTWGKGANGRLGHGDIEDRKIP 408



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 40/66 (60%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           ++V ++ G+ HV  ++   +VF WG  ++ +LG G+  + + P LV  L ++ +R ++ G
Sbjct: 366 NVVQVACGSYHVAVLTVKSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACG 425

Query: 76  RSHSAA 81
            + +AA
Sbjct: 426 ANFTAA 431



 Score = 38.9 bits (89), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 39/71 (54%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
           A +   +  +S GT H   +++TGQ+F +G+ +   LG GN+ +   P+ V +LS     
Sbjct: 195 ALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTI 254

Query: 71  QVSAGRSHSAA 81
            V+ G  H+AA
Sbjct: 255 AVACGVWHTAA 265


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGN--KPEQIGALADQHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDQGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGRNSHGQLGLG 172



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV AG +HS A
Sbjct: 189 GIPLAQVVAGGAHSFA 204



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 41/82 (50%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  +  G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +  G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 62/100 (62%), Gaps = 1/100 (1%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           +SVP   ++        +ACG++HS  V+S+G LYT+G   YG+LGHG   +  VP ++ 
Sbjct: 218 RSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLE 277

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
           AL  V +  +S G  HT+ +A+ GK +Y +G  ++G++G+
Sbjct: 278 ALKDVPISQISGGWRHTMAVAEDGK-LYGWGWNKFGQVGV 316



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 55/93 (59%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HSA + S   + ++G G+ G+LGHG + +  VP  + + +   V SV CG +HT
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHT 85

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  +D    +Y++G G++G+LG GN+     PQ
Sbjct: 86  IAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQ 118



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 413 AIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++ CG  H+   + +   LY++G GD+GRLGHG + +   P+ +VAL  + ++ ++CG +
Sbjct: 77  SVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDS 136

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           H + +   G+ V+++G  + G+LGLGN      PQ
Sbjct: 137 HCLTVTFNGQ-VHSWGRNQNGQLGLGNNQDSLLPQ 170



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   VT NG ++++G    G+LG G   +  +P+++ A   V V+ ++ G  HT
Sbjct: 131 IACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHT 190

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             I + G  +Y +G G YG LGL +   +  P+
Sbjct: 191 TAITEGGD-LYGWGWGRYGNLGLSDRDDRSVPE 222



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G +H+  +T  G LY +G G YG LG     +  VPE+V ++    +  V+CG  H+
Sbjct: 183 IAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHS 242

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           V ++  G A+Y +G  +YG+LG G+
Sbjct: 243 VSVSSSG-ALYTYGWSKYGQLGHGD 266



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 41/75 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A + + I  I+ G  H L V+  GQV +WG N + QLGLGN  +   PQ + A     
Sbjct: 120 IVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVC 179

Query: 69  IRQVSAGRSHSAAWT 83
           ++ ++AG  H+ A T
Sbjct: 180 VKMIAAGAEHTTAIT 194



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + A K++ I  IS G  H +AV+  G+++ WG N   Q+G+ + +++  P  V     
Sbjct: 274 RKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDE 333

Query: 67  KNIRQVSAGRSHSAAWT 83
           + I QV+ G  H+ A T
Sbjct: 334 QKIVQVACGWRHTLALT 350



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTG-QVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           + +F    +  +  G +H +A S+   Q+++WG     +LG GN  +   PQ ++AL   
Sbjct: 67  LTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM 126

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
            I+Q++ G SH    T      H+ G   +  L LG  QD
Sbjct: 127 KIKQIACGDSHCLTVTFNG-QVHSWGRNQNGQLGLGNNQD 165



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 3/119 (2%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I AF+ + +  I+ G EH  A++  G ++ WG      LGL ++ +   P+ V ++  
Sbjct: 170 QKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEG 229

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD--IPDHYGHLQNKPLPLI 123
           + +  V+ G  HS +  +     +T G +    L  G  QD  +P     L++ P+  I
Sbjct: 230 EKMVLVACGWRHSVS-VSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQI 287



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 31/46 (67%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           +ACG++H+  +T N  ++++G G  G+LGHG  ++   P+ + AL+
Sbjct: 339 VACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           IV ++ G  H LA++    +F+WG  +  QLG G  I+   P+++ ALS
Sbjct: 336 IVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H 
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGESHN 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   +     P++
Sbjct: 71  EGNKPEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRV 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  HS A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHSLALAA 154



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           ++ +A  G+  + +G   +G+LGLG
Sbjct: 149 SLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  HS  + ++G  +T+G   +G+LG G    +   P+RV +L  + +  V+ G  H
Sbjct: 142 VSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 202 SFALSLSG-AVFGWGMNNAGQLGLSDEEDRESP 233



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V+ +G LYT+G   YG+LGHG   +  +P +V AL + ++  VS G  HT
Sbjct: 219 VACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHT 278

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V + + GK +Y +G  ++G++G G+     +PQ
Sbjct: 279 VALTEAGK-LYGWGWNKFGQVGSGDVDDHTSPQ 310



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   VT++G +Y++G    G+LG G T +  VP +++A   V V+ ++ G  HT
Sbjct: 115 IACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHT 174

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + D GK +Y +G G YG LGLG+ G +  P
Sbjct: 175 AAVTDGGK-LYGWGWGRYGNLGLGDRGDRMLP 205



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+   ++    +Y++G GD+GRLGHG + +  VP  + AL  + +  ++CG +H
Sbjct: 62  VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSH 121

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
            + +   G+ VY++G  + G+LGLG+T
Sbjct: 122 CLAVTADGE-VYSWGRNQNGQLGLGDT 147



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G +H+A VT  G LY +G G YG LG G   +  +P  V A+    +  V+CG  HT
Sbjct: 167 LAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHT 226

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + ++  GK +Y +G  +YG+LG G+
Sbjct: 227 IAVSQSGK-LYTYGWSKYGQLGHGD 250



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 50/86 (58%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G  H+  + S   + +FG G+ G+LGHG   +  +P  + ALN   +  V+CG +HT
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHT 69

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
              +     +Y++G G++G+LG GN+
Sbjct: 70  TAYSATRLTIYSWGWGDFGRLGHGNS 95



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 44/73 (60%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A + + I  I+ G  H LAV+  G+V++WG N + QLGLG+  +   P  +LA    +
Sbjct: 104 IKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS 163

Query: 69  IRQVSAGRSHSAA 81
           ++ ++AG  H+AA
Sbjct: 164 VKMLAAGAEHTAA 176



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VA 457
           +P   A   ++    ++ G++H+  +T  G LY +G   +G++G G   +   P+ + + 
Sbjct: 256 LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIP 315

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
                V  VSCG  HTV + DK   VY++G G  G+LG G+   +  P+
Sbjct: 316 GQHQRVVQVSCGWRHTVAVTDKNN-VYSWGRGTSGQLGHGDAVDRSAPK 363



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +PA  +  +  ++ G  H +AVS +G+++ +G +   QLG G+  ++  P  V AL+  N
Sbjct: 208 VPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFN 267

Query: 69  IRQVSAGRSHSAAWT 83
           I QVS G  H+ A T
Sbjct: 268 ITQVSGGWRHTVALT 282



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALS 65
             + A    +I  +S G  H +A++  G+++ WG N   Q+G G+  ++  PQL+ +   
Sbjct: 258 HQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQ 317

Query: 66  NKNIRQVSAGRSHSAA 81
           ++ + QVS G  H+ A
Sbjct: 318 HQRVVQVSCGWRHTVA 333



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 7   RHIP----AFKNIHIVDISVGTEHVLAVSNTG-QVFAWGNNSDAQLGLGNQINYREPQLV 61
           RH+P    A  +  I  ++ G +H  A S T   +++WG     +LG GN  +   P  +
Sbjct: 45  RHLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPI 104

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
            AL    IRQ++ G SH  A TA     ++ G   +  L LG   D
Sbjct: 105 KALQGLEIRQIACGDSHCLAVTADG-EVYSWGRNQNGQLGLGDTDD 149



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 40/71 (56%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
           AF+ + +  ++ G EH  AV++ G+++ WG      LGLG++ +   P  V A+ ++ + 
Sbjct: 158 AFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMC 217

Query: 71  QVSAGRSHSAA 81
            V+ G  H+ A
Sbjct: 218 MVACGWRHTIA 228



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 30/46 (65%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           ++CG++H+  VT    +Y++G G  G+LGHG  ++   P+ + AL+
Sbjct: 324 VSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALS 369



 Score = 42.0 bits (97), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           +V +S G  H +AV++   V++WG  +  QLG G+ ++   P+ + ALS
Sbjct: 321 VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALS 369


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAH 348


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G Y  G LGHG  ++  VP+RV   L  +HV S+SCG 
Sbjct: 361 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 420

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 421 WHTAVVTSSGQ-LFTFGDGTFGVLGHGD 447



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+AVVTS+G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 414 SSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 473

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   K  P
Sbjct: 474 HTAAVVEVMVGNSSSSNCSSGK-LFTWGDGDKGRLGHGDKEAKLVP 518



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + +L+ +++E V+CG  HT
Sbjct: 309 IACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHT 368

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             +   G  +Y +GDG Y  G LG GN
Sbjct: 369 CAVTLSGD-LYTWGDGTYNFGLLGHGN 394



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 38/64 (59%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V+S++CG N T
Sbjct: 584 IACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGTNFT 643

Query: 474 VCIA 477
             I 
Sbjct: 644 AAIC 647



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+    + K+P RV   
Sbjct: 517 VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGR 575

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE ++CG  H   +  K + VY +G G  G+LG G+T  +  P
Sbjct: 576 LSKSFVEEIACGAYHVAVLTSKTE-VYTWGKGANGRLGHGDTDDRNFP 622



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD GRLGHG      VP  V AL + +
Sbjct: 469 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 528

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G  VY  G   YG+LG
Sbjct: 529 FCQVACGHSLTVALTTSGH-VYTMGSPVYGQLG 560



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 39/69 (56%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G  H   V+  G+VF+WG  S  +LG G   +   P+L+ +LSN NI  V+ 
Sbjct: 304 LDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVAC 363

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 364 GEYHTCAVT 372



 Score = 45.4 bits (106), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K ++ ++ G 
Sbjct: 581 VEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGT 640

Query: 77  SHSAA 81
           + +AA
Sbjct: 641 NFTAA 645



 Score = 38.1 bits (87), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 38/70 (54%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V+++GQ+F +G+ +   LG G++ +   P+ V +L      +
Sbjct: 408 LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 467

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 468 AACGVWHTAA 477


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG KH+AV+TS+G ++TFG G  G+LGH +  +   P +V  L    V  ++CG  HT
Sbjct: 250 VSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHT 309

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +      VY FG G  G+LGLG T    +P
Sbjct: 310 LALVPSSGRVYTFGRGGDGQLGLGVTNNCNSP 341



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 55/85 (64%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG+ H+A +  +G +YT G+ ++G+LG   +     PE V A+    +  V+CG  HT
Sbjct: 40  VSCGWNHTAFLCKDGTVYTCGSNEFGQLGQEKSHT--NPESVHAIETFTITKVTCGKAHT 97

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           V ++D+G  V+A+GD  YG++GLG+
Sbjct: 98  VAVSDQG-LVFAWGDNSYGQIGLGS 121



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 2/110 (1%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERV 455
           Q++P       +     IACG  HS  +T +G+L+ +G+   G+LG G T  +   P  V
Sbjct: 128 QTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPV 187

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++LN V    +S G  H+  ++  G A++ +G  EYG+LG+ +T  +P P
Sbjct: 188 LSLNGVPFMLISAGGAHSFALSSSG-ALFGWGKNEYGQLGVHDTTDRPLP 236



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 4/89 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV---PERVVALNKVHVESVSCGL 470
           + CG  H+  V+  G ++ +G+  YG++G G+ +  KV   P+ +  L K+ V  ++CG 
Sbjct: 90  VTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGC 149

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           NH++ +   G  ++ +GD   G+LG+G T
Sbjct: 150 NHSMALTISGH-LFCWGDNSSGQLGIGKT 177



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 3/85 (3%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE---P 58
           S T+   + A +   I  ++ G  H +AVS+ G VFAWG+NS  Q+GLG+++  +    P
Sbjct: 72  SHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIP 131

Query: 59  QLVLALSNKNIRQVSAGRSHSAAWT 83
           +++  L+  ++ Q++ G +HS A T
Sbjct: 132 KMLKGLAKMSVVQIACGCNHSMALT 156



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  ++S+G L+ +G  +YG+LG   T +  +P  + +L    V  VSCG  HT
Sbjct: 198 ISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHT 257

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +   G  V+ FG G  G+LG  +   + TP+
Sbjct: 258 AVLTSDG-GVFTFGCGTSGQLGHNSNHHEYTPR 289



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALS 65
           + +     + +V I+ G  H +A++ +G +F WG+NS  QLG+G    +  EP  VL+L+
Sbjct: 132 KMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLN 191

Query: 66  NKNIRQVSAGRSHSAAWTA 84
                 +SAG +HS A ++
Sbjct: 192 GVPFMLISAGGAHSFALSS 210



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           IS G  H  A+S++G +F WG N   QLG+ +  +   P L+ +L ++ +  VS G  H+
Sbjct: 198 ISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHT 257

Query: 80  AAWTA 84
           A  T+
Sbjct: 258 AVLTS 262



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%)

Query: 4   TSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQ 59
           T+ R +P    + ++  +  +S G +H   +++ G VF +G  +  QLG  +  +   P+
Sbjct: 230 TTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPR 289

Query: 60  LVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGL 104
            V  L    + Q++ GR+H+ A        +T G      L LG+
Sbjct: 290 KVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGV 334


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAH 348


>gi|354472548|ref|XP_003498500.1| PREDICTED: probable E3 ubiquitin-protein ligase C12orf51-like
            [Cricetulus griseus]
          Length = 4355

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 148/337 (43%), Gaps = 35/337 (10%)

Query: 105  PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
            P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 3854 PADATDPRMACLSNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTPMYTHSIAALL 3911

Query: 164  HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
              +   +F     T+ + R +  T+     +  P +T+  L     + + +    F Q +
Sbjct: 3912 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLEIVGGEIRASENSYFCQAA 3970

Query: 220  RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
            RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 3971 RQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 4030

Query: 273  VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L P  W
Sbjct: 4031 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDLLPSFW 4086

Query: 332  KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI----IPLECFEGA--- 383
            K +V EP+    DL++ D L    ++    I+     EA   EI    +P E  EG    
Sbjct: 4087 KTLVGEPLDPDQDLQEADILTYNYVKKFESINDESELEALCAEIASQHLPTESPEGPKPC 4146

Query: 384  ------SWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
                  + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 4147 CRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 4182


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 62/100 (62%), Gaps = 1/100 (1%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           +SVP   ++        +ACG++HS  V+S+G LYT+G   YG+LGHG   +  VP ++ 
Sbjct: 218 RSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLE 277

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
           AL  V +  +S G  HT+ +A+ GK +Y +G  ++G++G+
Sbjct: 278 ALKDVPISQISGGWRHTMAVAEDGK-LYGWGWNKFGQVGV 316



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 55/93 (59%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HSA + S   + ++G G+ G+LGHG + +  VP  + + +   V SV CG +HT
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHT 85

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  +D    +Y++G G++G+LG GN+     PQ
Sbjct: 86  IAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQ 118



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 413 AIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++ CG  H+   + +   LY++G GD+GRLGHG + +   P+ +VAL  + ++ ++CG +
Sbjct: 77  SVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDS 136

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           H + +   G+ V+++G  + G+LGLGN      PQ
Sbjct: 137 HCLTVTFNGQ-VHSWGRNQNGQLGLGNNQDSLLPQ 170



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   VT NG ++++G    G+LG G   +  +P+++ A   V V+ ++ G  HT
Sbjct: 131 IACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHT 190

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             I + G  +Y +G G YG LGL +   +  P+
Sbjct: 191 TAITEGGD-LYGWGWGRYGNLGLSDRDDRSVPE 222



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G +H+  +T  G LY +G G YG LG     +  VPE+V ++    +  V+CG  H+
Sbjct: 183 IAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHS 242

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           V ++  G A+Y +G  +YG+LG G+
Sbjct: 243 VSVSSSG-ALYTYGWSKYGQLGHGD 266



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 41/75 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A + + I  I+ G  H L V+  GQV +WG N + QLGLGN  +   PQ + A     
Sbjct: 120 IVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVC 179

Query: 69  IRQVSAGRSHSAAWT 83
           ++ ++AG  H+ A T
Sbjct: 180 VKMIAAGAEHTTAIT 194



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + A K++ I  IS G  H +AV+  G+++ WG N   Q+G+ + +++  P  V     
Sbjct: 274 RKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDE 333

Query: 67  KNIRQVSAGRSHSAAWT 83
           + I QV+ G  H+ A T
Sbjct: 334 QKIVQVACGWRHTLALT 350



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTG-QVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           + +F    +  +  G +H +A S+   Q+++WG     +LG GN  +   PQ ++AL   
Sbjct: 67  LTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM 126

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
            I+Q++ G SH    T      H+ G   +  L LG  QD
Sbjct: 127 KIKQIACGDSHCLTVTFNG-QVHSWGRNQNGQLGLGNNQD 165



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 3/119 (2%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I AF+ + +  I+ G EH  A++  G ++ WG      LGL ++ +   P+ V ++  
Sbjct: 170 QKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEG 229

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD--IPDHYGHLQNKPLPLI 123
           + +  V+ G  HS +  +     +T G +    L  G  QD  +P     L++ P+  I
Sbjct: 230 EKMVLVACGWRHSVS-VSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQI 287



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 31/46 (67%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           +ACG++H+  +T N  ++++G G  G+LGHG  ++   P+ + AL+
Sbjct: 339 VACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           IV ++ G  H LA++    +F+WG  +  QLG G  I+   P+++ ALS
Sbjct: 336 IVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cavia porcellus]
          Length = 780

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 4/102 (3%)

Query: 403 FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           F N +  Y   ++CG +H+AVVT N  LY FG+ ++G+LG G+  + K P  V AL    
Sbjct: 32  FKNDIPMY---LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEK 88

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           V+  +CG NHT+ +   G  VYA G    G+LGLG+T  + T
Sbjct: 89  VQFAACGRNHTLILTVVGN-VYAAGGNNEGQLGLGDTEERNT 129



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG      +N + P+ V  + +  V  V+CG  
Sbjct: 195 ISCGYYHSAFVTMDGELYTFGEPESGKLGLPKELLINHRTPQLVAGIPE-KVIQVACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  KAVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--KAVYTFGLGQFGQLGLG 277



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 9/88 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
           +ACG  H+ V+T    +YTFG G +G+LG GT    T+  KV E++       +  +SCG
Sbjct: 248 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFCFETLEPKVIEQI---KNQKITYISCG 303

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            NHT  I+D G  +Y FGDG +GKLGLG
Sbjct: 304 ENHTALISDIG-LMYTFGDGRHGKLGLG 330



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 43/72 (59%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   + +S G EH   V+   +++ +G+N+  QLGLG++ + ++P  V AL  + ++ 
Sbjct: 32  FKNDIPMYLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQF 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLILT 103



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLNHT 473
           ACG  H+ ++T  G +Y  G  + G+LG G T       R+      H ++ +S G N +
Sbjct: 93  ACGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRISFFTSEHNIKQLSAGSNTS 152

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +++ G+ ++ +GD   G++GL +
Sbjct: 153 AALSEDGR-LFMWGDNSEGQIGLND 176



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A+++  G +YTFG+G +G+LG G     N   P       +  V+ V+CG  
Sbjct: 300 ISCGENHTALISDIGLMYTFGDGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVACGGC 359

Query: 472 HTVCIA 477
            T+  A
Sbjct: 360 QTLVFA 365



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 6/101 (5%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A+S  G++F WG+NS+ Q+GL + I+   P  V     K
Sbjct: 133 ISFFTSEHNIKQLSAGSNTSAALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNI--GK 190

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI 108
            I  +S G  HSA  T      +T G   S   +LGLP+++
Sbjct: 191 PISWISCGYYHSAFVTMDG-ELYTFGEPESG--KLGLPKEL 228



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNK 67
           + A K   +   + G  H L ++  G V+A G N++ QLGLG+        ++    S  
Sbjct: 81  VKALKPEKVQFAACGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRISFFTSEH 140

Query: 68  NIRQVSAGRSHSAAWT 83
           NI+Q+SAG + SAA +
Sbjct: 141 NIKQLSAGSNTSAALS 156


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGAKGQLGTGHT 332



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A++T  G L+TFG G  G+LGH +  N   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           +        +YAFG G+ G+LG G+
Sbjct: 307 LAFVPSSGTLYAFGCGDLGQLGTGH 331



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           IACG  HS  ++  G LY++G G+ G+LGH T  ++ ++P  +  L++  ++ +SCG +H
Sbjct: 89  IACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
            + + D G+ ++ +G   +G+LGLGN
Sbjct: 149 CLALGDDGQ-LFTWGQNTHGQLGLGN 173



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ-INYREPQLVLALS 65
           R I       I  +S G +H LA+ + GQ+F WG N+  QLGLGN  I+   PQ V +L 
Sbjct: 129 RIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG SHS A
Sbjct: 189 GIPLAQVTAGGSHSFA 204



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 5/128 (3%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQL 60
            GT    +      HI  I+ G  H LA+S  G +++WG  +D QLG     +Y R P++
Sbjct: 71  EGTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRI 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG---LPQDIPDHYGHLQN 117
           +  LS + I+Q+S G  H  A         T G      L LG   + Q  P     L+ 
Sbjct: 131 IKKLSQQKIQQMSCGDDHCLA-LGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEG 189

Query: 118 KPLPLIRA 125
            PL  + A
Sbjct: 190 IPLAQVTA 197



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   +  +G L+T+G   +G+LG G   ++   P++V +L  + +  V+ G +H
Sbjct: 142 MSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +  +K TP
Sbjct: 202 SFALSLSG-AVFGWGKNSAGQLGLNDEQVKETP 233



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 3/82 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG KH+  +  +G +Y+ G    G+LGH        P  V  L + H++ ++CG +H+
Sbjct: 39  VACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAP--VATLAEEHIKHIACGQSHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           + ++ +G  +Y++G G  G+LG
Sbjct: 97  LALSLQGN-LYSWGAGNDGQLG 117



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%)

Query: 1   MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
           +S +S + + + + I +  ++ G  H  A+S +G VF WG NS  QLGL ++     P  
Sbjct: 176 ISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCH 235

Query: 61  VLALSNKNIRQVSAGRSHSAAWT 83
           V  L    +  +S G  H+A  T
Sbjct: 236 VKPLRTHKVVYISCGEEHTAILT 258



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG---LGNQINYREPQLVLAL 64
           H+   +   +V IS G EH   ++  G +F +G     QLG   L N+IN   P+ VL L
Sbjct: 235 HVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEIN---PRRVLEL 291

Query: 65  SNKNIRQVSAGRSHSAAW 82
               + Q++ GR H+ A+
Sbjct: 292 MGSEVSQIACGRKHTLAF 309



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 412 AAIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           + IACG KH+ A V S+G LY FG GD G+LG G   N K P  V
Sbjct: 297 SQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVV 341



 Score = 41.6 bits (96), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          + +++ G +H L +   GQV++ G N + QLG  ++  +  P  V  L+ ++I+ ++ G+
Sbjct: 36 VKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAP--VATLAEEHIKHIACGQ 93

Query: 77 SHSAA 81
          SHS A
Sbjct: 94 SHSLA 98



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +  G  HS  ++ +G ++ +G    G+LG       + P  V  L    V  +SCG  
Sbjct: 193 AQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  I  K   ++ FG G  G+LG
Sbjct: 253 HTA-ILTKAGGLFTFGAGGSGQLG 275


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 9/101 (8%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H+A+++S G ++T+G+G +G LGHG T+    P++V +L  V  ++++CG  HT
Sbjct: 327 IACGHWHTAIISSAGQIFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHT 386

Query: 474 VCIADKGKAV---------YAFGDGEYGKLGLGNTGLKPTP 505
             I ++   V         + +GD + GKLG  +  +K  P
Sbjct: 387 AAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVP 427



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 54/84 (64%), Gaps = 2/84 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG KH+A+VT  G ++++G  + GRLGH  +++   P+ + +L    V++++ G  H
Sbjct: 219 SVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKH 278

Query: 473 TVCIADKGKAVYAFGDGEYGKLGL 496
           T  ++  G+ +Y +G+G +  LGL
Sbjct: 279 TCAVSISGE-LYEWGEGTHC-LGL 300



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 38/64 (59%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            K   + +IS G+ H+  ++  G+VF WG  ++ QLGLG+ ++   P LV AL +K +  
Sbjct: 485 LKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHS 544

Query: 72  VSAG 75
           ++ G
Sbjct: 545 IACG 548



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 413 AIACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           AIACG  H+A +            +G L+T+G+ D G+LGH       VP  V  LN   
Sbjct: 378 AIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFD 437

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              VSC    T+ +   G  V+  G  E+G+LG
Sbjct: 438 FAQVSCAKAQTIVLTITG-VVFTIGSKEHGRLG 469



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+   GR+   ++   S+ L        +   I+ G  H AV+T NG ++T+G G  G+L
Sbjct: 461 GSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQL 520

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           G G  ++   P  V AL    V S++CG N T+ I 
Sbjct: 521 GLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAIC 556



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 4/116 (3%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDY--GRLGHG 444
           GR+   V+   S P    +       AIA G KH+  V+ +G LY +G G +  G  G  
Sbjct: 245 GRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQ 304

Query: 445 TTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
              +   P ++   L+ + +  ++CG  HT  I+  G+ ++ +GDG +G LG G+T
Sbjct: 305 YQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQ-IFTYGDGTFGVLGHGDT 359



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 16  HIVDI---SVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           HI+D+   + G +H   V+  G+VF+WG ++  +LG    ++  +P+++ +L++  ++ +
Sbjct: 213 HIIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAI 272

Query: 73  SAGRSHSAA 81
           + G  H+ A
Sbjct: 273 AFGAKHTCA 281



 Score = 45.1 bits (105), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++C    + V+T  G ++T G+ ++GRLG+  + +  +      L    V  +S G +
Sbjct: 439 AQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSS 498

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           H   +   GK V+ +G G  G+LGLG+
Sbjct: 499 HIAVLTMNGK-VFTWGKGTEGQLGLGD 524


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
           GTPase regulator, partial [Callithrix jacchus]
          Length = 817

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G  + G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNDEGQLGLGDTEERTT 129



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +HS V+T +  +YTFG G +G+LG GT +     P+ V  +    +  +SCG NH
Sbjct: 248 VACGGEHSVVLTEDA-VYTFGLGQFGQLGLGTLLFETSEPKVVENIGNKTISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
              + D G  +Y FGDG +GKLGLG
Sbjct: 307 AALLTDNG-LMYTFGDGRHGKLGLG 330



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG    +  N ++P+ V  + +  ++ V+CG  
Sbjct: 195 ISCGYYHSAFVTTDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPEKVIQ-VACGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           H+V + +   AVY FG G++G+LGLG
Sbjct: 254 HSVVLTE--DAVYTFGLGQFGQLGLG 277



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T NG +YTFG+G +G+LG G     N   P       K  V+ V+CG  
Sbjct: 300 ISCGENHAALLTDNGLMYTFGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVVFA 365



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLNHT 473
           ACG  H+ V T  G +Y  G  D G+LG G T       RV      H ++ +S G N +
Sbjct: 93  ACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLSAGSNTS 152

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             + + G+ ++ +GD   G++GL N
Sbjct: 153 AALTEDGR-LFMWGDNSEGQIGLPN 176



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 3/91 (3%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           Q+    ++ G   SA +T +G L+ +G+   G++G    +N  VP +V     V    +S
Sbjct: 139 QHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNACVPHQVTIGKPVSW--IS 196

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           CG  H+  +   G+ +Y FG+ E GKLGL N
Sbjct: 197 CGYYHSAFVTTDGE-LYIFGESENGKLGLPN 226



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVAVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 14/110 (12%)

Query: 4   TSGRHIPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           T+   +  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N +N   P  V 
Sbjct: 128 TTFHRVSFFTSQHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNACVPHQVT 187

Query: 63  ALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHT----PSSSLRLGLPQDI 108
               K +  +S G  HSA  T       T G       S + +LGLP ++
Sbjct: 188 I--GKPVSWISCGYYHSAFVT-------TDGELYIFGESENGKLGLPNEL 228



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G V+A G N + QLGLG+         V    S  
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQH 140

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156



 Score = 38.5 bits (88), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           ++ ++ G EH + ++    V+ +G     QLGLG  +    EP++V  + NK I  +S G
Sbjct: 245 VIQVACGGEHSVVLTEDA-VYTFGLGQFGQLGLGTLLFETSEPKVVENIGNKTISYISCG 303

Query: 76  RSHSAAWTAPPLPPHTPGHTPSSSLRLGL 104
            +H+A  T   L  +T G      L LGL
Sbjct: 304 ENHAALLTDNGL-MYTFGDGRHGKLGLGL 331


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
          Length = 477

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 60/115 (52%), Gaps = 13/115 (11%)

Query: 395 GGQSVPLTFANRLQYYEA-----------AIACGFKHSAVVTSNGYLYTFGNGDYGRLGH 443
           GG+   L F   +  +E             IACG+ H+A+VT+ G L TFG  D G+LG 
Sbjct: 156 GGEEGQLGFGEDVTKHETPERLDVDDEVVCIACGYYHTALVTAGGKLLTFGETDEGKLGR 215

Query: 444 GTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           G+        +VV   + HV SV+CG  HTV I   G  VY FG+G  G+LG GN
Sbjct: 216 GSDTGDNCLPKVVDGIEGHVVSVACGGAHTVAIT--GWLVYTFGNGSSGQLGHGN 268



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 6/106 (5%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGTTM-NWKV 451
           TG   +P    + ++ +  ++ACG  H+  +T  G+L YTFGNG  G+LGHG  +     
Sbjct: 219 TGDNCLP-KVVDGIEGHVVSVACGGAHTVAIT--GWLVYTFGNGSSGQLGHGNMLLQADT 275

Query: 452 PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           P ++V      V S SCG NHT  + D+G+ ++  GDG +GKL LG
Sbjct: 276 PHKIVWQKPTKVRSASCGENHTALVTDRGQ-LWTCGDGRHGKLALG 320



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 1/84 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H++++  +G ++TFG+  +G+LG G T     P R+ +L    V  V+CG +HT
Sbjct: 30  ISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGRSHT 89

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           +   + GK +Y+FG     +LGLG
Sbjct: 90  LLATESGK-IYSFGCNNDRQLGLG 112



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 39/63 (61%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          ++ IS G EH   ++  G+VF +G+N+  QLGLG+     +P  + +L  + + QV+ GR
Sbjct: 27 VLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGR 86

Query: 77 SHS 79
          SH+
Sbjct: 87 SHT 89



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 5/95 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++ G  HS V+T  G +Y +G G+ G+LG G  +   + PER+   ++  V  ++CG  H
Sbjct: 135 LSAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDE--VVCIACGYYH 192

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
           T  +   GK +  FG+ + GKLG G +TG    P+
Sbjct: 193 TALVTAGGK-LLTFGETDEGKLGRGSDTGDNCLPK 226



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGR--LGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + +CG  H+A+VT  G L+T G+G +G+  LG     N   P   V  +K  VE VSCG 
Sbjct: 289 SASCGENHTALVTDRGQLWTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGG 348

Query: 471 NHTVCIA----DKGKAVYAFGDGEYG 492
            HT+         G A +   D E G
Sbjct: 349 CHTLATGKPSLQNGNAAHDSSDEEGG 374



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLALSNK 67
           I + K   +  ++ G  H L  + +G+++++G N+D QLGLG +      P ++  L + 
Sbjct: 71  IKSLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESH 130

Query: 68  NIRQVSAGRSHSAAWT 83
            ++ +SAG  HS   T
Sbjct: 131 AVKMLSAGMYHSCVLT 146


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAA 81
           +  L+ + I QVS G  H  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLA 151



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H   +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGN--QPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDQGQ-LFSWGAGSDGQLGLMTT 121



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALATDGQ-FFTWGKNSHGQLGLG 172



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S TS + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          + +++ G +H + +   G+V+  G N+  QLG   + N  +P+ + AL++++I  V+ G 
Sbjct: 36 VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGN--QPEQIGALADQHIIHVACGE 93

Query: 77 SHSAA 81
          SHS A
Sbjct: 94 SHSLA 98


>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
 gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
          Length = 815

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 3/85 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGL 470
           +++CG +H   VT +G LYT+G G +G+LGH    ++  P++V A  LN + V  VSCG 
Sbjct: 261 SVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGS 320

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLG 495
           N T+ +  + + +YAFG GEY +LG
Sbjct: 321 NFTMVLG-RNQILYAFGHGEYAQLG 344



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 38/70 (54%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N  ++DIS G     AV+ +G++F WG N   QLGL ++     PQLV  L +  I  VS
Sbjct: 204 NEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQLVKTLLDVKIVSVS 263

Query: 74  AGRSHSAAWT 83
            GR H  A T
Sbjct: 264 CGRQHIGAVT 273



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG------------HGTTMNWKVPERVVALN 459
           + ++CG   + V+  N  LY FG+G+Y +LG                  +  P+ V AL 
Sbjct: 314 SQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKVVEALE 373

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              ++ V+CG  HT+ + +  + VY +G G  G LGL +   +  PQ
Sbjct: 374 DKKIKYVTCGHLHTLALTEDNE-VYVWGWGSSGCLGLNSKRFQLVPQ 419



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 2/111 (1%)

Query: 389 ITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM 447
           I  I+   Q+ P+     L   E   I+ G+  SA VT +G ++T+G  + G+LG     
Sbjct: 184 IGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRW 243

Query: 448 NWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
               P+ V  L  V + SVSCG  H   + + G  +Y +G G +G+LG  N
Sbjct: 244 FNSSPQLVKTLLDVKIVSVSCGRQHIGAVTEDGD-LYTWGLGVFGQLGHSN 293



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           +S + + A ++  I  ++ G  H LA++   +V+ WG  S   LGL ++     PQLV +
Sbjct: 364 SSPKVVEALEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLVTS 423

Query: 64  LSNKNIRQVSAGRSHS 79
           +S + I  +SAG  HS
Sbjct: 424 ISGEEISCISAGEKHS 439



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALSNK 67
           + + K   IV  S G  H + VS  G V++WG   + QLG+  ++ +  +P L+  L ++
Sbjct: 28  LESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGKEGQLGVPEKMLFSTKPNLIKTLLHE 87

Query: 68  NIRQVSAGRSHSAAWT 83
            + +V+ G  HS A T
Sbjct: 88  RVVKVACGNFHSLALT 103



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR--Q 71
           ++ IV +S G +H+ AV+  G ++ WG     QLG  N  +Y  P+ V A S   I+  Q
Sbjct: 256 DVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQ 315

Query: 72  VSAG 75
           VS G
Sbjct: 316 VSCG 319



 Score = 38.5 bits (88), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 14/91 (15%)

Query: 7   RHIPAF--KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL------------GNQ 52
           + + AF    I +  +S G+   + +     ++A+G+   AQLG              N 
Sbjct: 301 KKVAAFSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNH 360

Query: 53  INYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
             Y  P++V AL +K I+ V+ G  H+ A T
Sbjct: 361 FKYSSPKVVEALEDKKIKYVTCGHLHTLALT 391


>gi|301618548|ref|XP_002938676.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Xenopus
           (Silurana) tropicalis]
          Length = 971

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+A++T  G L+TFG G  G+LGH +  N   P RV+ L    V  ++CG  HT
Sbjct: 168 ISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLNNEINPRRVLELMGSEVSQIACGRQHT 227

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           +        +YAFG G+ G+LG G+
Sbjct: 228 LAFVPSSGTLYAFGCGDLGQLGTGH 252



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQL 60
            GT    +      HI  I+ G  H LA+S  GQ+++WG+ +D QLG    + + R P++
Sbjct: 71  EGTDPVQVTTLTEEHITHIACGQSHNLALSYQGQLYSWGSGNDGQLGHATVEHSSRIPRI 130

Query: 61  VLALSNKNIRQVSAGRSHSAA 81
           +  L+ + I+QVS G  H  A
Sbjct: 131 IKKLNQQKIQQVSCGNDHCMA 151



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGLNH 472
           IACG  H+  ++  G LY++G+G+ G+LGH T   + ++P  +  LN+  ++ VSCG +H
Sbjct: 89  IACGQSHNLALSYQGQLYSWGSGNDGQLGHATVEHSSRIPRIIKKLNQQKIQQVSCGNDH 148

Query: 473 TVCIAD 478
            + + D
Sbjct: 149 CMALGD 154



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 9/85 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGH---GTTMNWKVPERVVALNKVHVESVSCGL 470
           +ACG KH+  +  +G +Y+ G    G+LGH   GT      P +V  L + H+  ++CG 
Sbjct: 39  VACGGKHTLFLLEDGQVYSCGWNGEGQLGHDHEGTD-----PVQVTTLTEEHITHIACGQ 93

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLG 495
           +H + ++ +G+ +Y++G G  G+LG
Sbjct: 94  SHNLALSYQGQ-LYSWGSGNDGQLG 117



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG---LGNQINYREPQLVLALSNKNIRQVS 73
           ++ IS G EH   ++  G +F +G     QLG   L N+IN   P+ VL L    + Q++
Sbjct: 165 VIYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLNNEIN---PRRVLELMGSEVSQIA 221

Query: 74  AGRSHSAAW 82
            GR H+ A+
Sbjct: 222 CGRQHTLAF 230



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 412 AAIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           + IACG +H+ A V S+G LY FG GD G+LG G   N K P  V      H   +S
Sbjct: 218 SQIACGRQHTLAFVPSSGTLYAFGCGDLGQLGTGHKNNVKCPAVVKGKWAAHSGQIS 274


>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
          Length = 527

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ   A  IACG   S  V + G +Y +G    G+
Sbjct: 153 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 213 LGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 271

Query: 501 LKPTP 505
            +  P
Sbjct: 272 NQSYP 276



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 133 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAV-NIACGQM 191

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ VY +G    G+LGLG++G +PTP
Sbjct: 192 CSMAVVNTGE-VYVWGYNGNGQLGLGSSGNQPTP 224



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 216 GSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 275

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 276 PAPVIVEKDRIIEIAACHSAHTSA 299



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 86  HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTS 145

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 146 DGE-VFAWGYNNSGQVGSGSTANQPIPR 172



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N   V+I+ G    +AV NTG+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 173 RVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 232

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 233 IRVQRVACGYAHTLVLT 249



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 47/106 (44%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G +  G++    +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+L
Sbjct: 206 GYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL 265

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G G   N   P  V+      +E  +C   HT     +G  VY +G
Sbjct: 266 GTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  + +++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK   
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAV 184

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 185 NIACGQMCSMA 195



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 66  RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 126 SNKQVTEVACGSYHSLVLTS 145


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 251 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 310

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 311 LAFVPSSGLIYAFGCGARGQLGTGHT 336



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 43  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 100

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 101 LALSDRGQ-LFSWGAGSDGQLGLMTT 125



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 75  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 134

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 135 IQKLNQQTILQVSCGNWHCLALAA 158



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 133 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 192

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 193 GIPLAQVAAGGAHSFA 208



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 93  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 152

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 153 CLALAADGQ-FFTWGKNSHGQLGLG 176



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 181 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 240

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 241 KLLRTQKVVYISCGEEHTAVLT 262



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 239 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 298

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 299 EVTQIACGRQHTLAF 313



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 197 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 256

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 257 HTAVLTKSG-GVFTFGAGSCGQLG 279



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 303 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 357


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+GNG Y  G LGHG  ++  VP+RV   L  +HV  +SCG 
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGP 426

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 427 WHTAVVTSAGQ-LFTFGDGTFGALGHGD 453



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 13/104 (12%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ HT
Sbjct: 422 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHT 481

Query: 474 VCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + +             GK ++ +GDG+ G+LG G+   K  P
Sbjct: 482 AAVVEVMVGNSSSSNCSSGK-LFTWGDGDKGRLGHGDKEAKLVP 524



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + AL+  ++E V+CG  HT
Sbjct: 315 IACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHT 374

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             +   G  +Y +G+G Y  G LG GN
Sbjct: 375 CAVTLSGD-LYTWGNGTYNCGLLGHGN 400



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 40/70 (57%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           + +   IACG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V+S++
Sbjct: 585 ESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIA 644

Query: 468 CGLNHTVCIA 477
           CG N T  I 
Sbjct: 645 CGTNFTAAIC 654



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 14/95 (14%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN-KV 461
           ACG  H+A V              +G L+T+G+GD GRLGHG      VP RV  +N K 
Sbjct: 475 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKP 534

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
           +   V+CG + TV +  KG  VY  G   YG+LG+
Sbjct: 535 NFCQVACGHSLTVALTTKGH-VYTMGSPVYGQLGI 568



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 39/69 (56%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G  H   V+  G++F+WG  +  +LG G   +   P+L+ ALSN NI  V+ 
Sbjct: 310 LDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVAC 369

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 370 GEYHTCAVT 378



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG   +  +T+ G++YT G+  YG+LG     + K+P  V   L++  VE ++CG  H
Sbjct: 539 VACGHSLTVALTTKGHVYTMGSPVYGQLGI-PQADGKLPICVEWKLSESFVEEIACGAYH 597

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +  + + VY +G G  G+LG G+T  + TP
Sbjct: 598 VAVLTSRTE-VYTWGKGANGRLGHGDTDDRNTP 629



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 40/65 (61%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K+++ ++ G 
Sbjct: 588 VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGT 647

Query: 77  SHSAA 81
           + +AA
Sbjct: 648 NFTAA 652



 Score = 38.9 bits (89), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNS--DAQLGLGNQINYREPQLVLA-LS 65
           I A  N +I  ++ G  H  AV+ +G ++ WGN +     LG GNQ+++  P+ V   L 
Sbjct: 356 IEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLE 415

Query: 66  NKNIRQVSAGRSHSAAWTA 84
             ++  +S G  H+A  T+
Sbjct: 416 GIHVSYISCGPWHTAVVTS 434


>gi|332819953|ref|XP_517337.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Pan
           troglodytes]
          Length = 976

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 173 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 232

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 233 LAFVPSSGLIYAFGCGARGQLGTGHT 258



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTAPPLPP 89
           +  L+ + I QVS G  H  A  A    P
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAADRESP 159



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 161 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 220

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 221 EVTQIACGRQHTLAF 235



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIA 477
            + +A
Sbjct: 149 CLALA 153



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V
Sbjct: 225 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 267


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGHG   N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN--KPEQIGALADQHIVHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G     I A  + HIV ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L
Sbjct: 71  EGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 61  VLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDH 111
           +  L+ + I QVS G  H  A  A      T G   +S  +LGL +D P  
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAADG-QFFTWG--KNSHGQLGLGKDFPSQ 178



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG    +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H   + ++G  +T+G   +G+LG G    +   P+RV +L  + +  V+ G  H
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G AV+ +G    G+LGL +   + +P
Sbjct: 202 SFALSLSG-AVFGWGMNNAGQLGLSDEEDRESP 233



 Score = 45.4 bits (106), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          + +++ G  H + +   G+V+  G N+  QLG G + N  +P+ + AL++++I  V+ G 
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN--KPEQIGALADQHIVHVACGE 93

Query: 77 SHSAA 81
          SHS A
Sbjct: 94 SHSLA 98



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAH 348


>gi|268559042|ref|XP_002637512.1| C. briggsae CBR-GLO-4 protein [Caenorhabditis briggsae]
          Length = 1100

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 1/83 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  HSA++TS G LYT+G G   +LGHG       P +V   N+V   +VS G NHT
Sbjct: 733 IACGLSHSALITSEGSLYTWGKGLDYQLGHGNKTERMEPHQVFEPNEVKWTNVSLGNNHT 792

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           +   D G +VYA+G  E+G+ G+
Sbjct: 793 IGSTDDG-SVYAWGKNEFGQCGV 814



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 4/85 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK--VPERVVALNKVHVESVSCGLN 471
           IACG  HSA + S+G L+TFG G +G+LG G   N    VP +V  L    V  V+CG  
Sbjct: 536 IACGQFHSAFICSDGSLWTFGWGIWGQLGQGGRFNSNILVPTKVNGLIS-KVTQVACGRA 594

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGL 496
           HT+ + + G+ V   G G YG++G+
Sbjct: 595 HTIVLTENGR-VLVCGSGSYGQMGV 618



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 12/90 (13%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-----VESVS 467
           AIACG +H  V++S+G L  +G   +G+ G G         R+  L ++      +E ++
Sbjct: 484 AIACGAEHILVLSSSGQLSAWGGNKHGQCGVGHAF------RLANLQQIDGDWPSIEKIA 537

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           CG  H+  I   G +++ FG G +G+LG G
Sbjct: 538 CGQFHSAFICSDG-SLWTFGWGIWGQLGQG 566



 Score = 45.1 bits (105), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 35/73 (47%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +  F +  IV I+ G  H   +++ G ++ WG   D QLG GN+    EP  V   + 
Sbjct: 720 REVKHFLDGSIVKIACGLSHSALITSEGSLYTWGKGLDYQLGHGNKTERMEPHQVFEPNE 779

Query: 67  KNIRQVSAGRSHS 79
                VS G +H+
Sbjct: 780 VKWTNVSLGNNHT 792



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I+ G EH+L +S++GQ+ AWG N   Q G+G+       Q +      +I +++ G+ HS
Sbjct: 485 IACGAEHILVLSSSGQLSAWGGNKHGQCGVGHAFRLANLQQIDG-DWPSIEKIACGQFHS 543

Query: 80  A 80
           A
Sbjct: 544 A 544


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 11/103 (10%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++ACG  HSA+ T+NG L+TFG+G +G LGHG   +   P+ V  L+ +    V+CG+ H
Sbjct: 1313 SVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWH 1372

Query: 473  TVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
            TV I +           + ++ +GDG+  +LG GN  T L PT
Sbjct: 1373 TVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPT 1415



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 3/79 (3%)

Query: 399  VPLTFANRL--QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
            +P    +RL  ++ E  I+CG  H AV+TS   ++T+G G  GRLGHG   + K P  V 
Sbjct: 1464 LPCLVQDRLVGEFVEE-ISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVE 1522

Query: 457  ALNKVHVESVSCGLNHTVC 475
            AL + HV+S+SCG + +VC
Sbjct: 1523 ALRERHVKSISCGADQSVC 1541



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
            +ACG  H+  V+++G L+T+G+G  + G LGHG+ ++  +P+RV   +  + V SV+CG 
Sbjct: 1259 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGT 1318

Query: 471  NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             H+      GK ++ FGDG +G LG G+
Sbjct: 1319 WHSALATANGK-LFTFGDGAFGVLGHGD 1345



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            IACG +H A+VT  G ++T+     GRLGHG  ++   P+ V  L   +++ V+CG  HT
Sbjct: 1207 IACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHT 1266

Query: 474  VCIADKGKAVYAFGDG--EYGKLGLGN 498
              ++  G  ++ +GDG    G LG G+
Sbjct: 1267 CAVSTSGD-LFTWGDGIHNVGLLGHGS 1292



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 9/111 (8%)

Query: 399  VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP----ER 454
            +P   ++ + Y    IACG   +  +T++G+++T G   +G+LG   + + K+P    +R
Sbjct: 1413 LPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLPCLVQDR 1471

Query: 455  VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +V      VE +SCG +H   +  + + V+ +G G  G+LG G+   + TP
Sbjct: 1472 LVG---EFVEEISCGDHHVAVLTSRSE-VFTWGKGSNGRLGHGDKDDRKTP 1518



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)

Query: 414  IACGFKHSAVV----------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
            +ACG  H+  +          TS+  L+T+G+GD  RLGHG    + +P  V +L   + 
Sbjct: 1366 VACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNF 1425

Query: 464  ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
              ++CG   TV +   G  V+  G   +G+LG  N+  K
Sbjct: 1426 NQIACGHTFTVALTTSGH-VFTMGGTSHGQLGSSNSDGK 1463



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 38/65 (58%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            + +IS G  HV  +++  +VF WG  S+ +LG G++ + + P LV AL  ++++ +S G 
Sbjct: 1477 VEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGA 1536

Query: 77   SHSAA 81
              S  
Sbjct: 1537 DQSVC 1541



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 36/64 (56%)

Query: 18   VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
            +DI+ G  H+  V+  G+VF W   +  +LG G Q++   P+LV  L+  NI  V+ G  
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEY 1264

Query: 78   HSAA 81
            H+ A
Sbjct: 1265 HTCA 1268


>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 608

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 59/86 (68%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LYTFG  + G+LG  +   +N + P+RV+ +    ++ V+CG  
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGG 291

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  K VYAFG G++G+LGLG
Sbjct: 292 HTVVLTE--KVVYAFGLGQFGQLGLG 315



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNH 136

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 137 TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 167



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +Y FG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 286 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENH 344

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  + D G  +Y FGDG +GKLGLG
Sbjct: 345 TALMTDIG-LMYTFGDGRHGKLGLG 368



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + A
Sbjct: 62  ENIPSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKA 121

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L  + ++  + GR+H+   T
Sbjct: 122 LKPEKVKLAACGRNHTLVST 141



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISW--ISCGYYHS 240

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y FG+ E GKLGL N
Sbjct: 241 AFVTTDGE-LYTFGEPENGKLGLPN 264



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N   P       K  V+ ++CG  
Sbjct: 338 ISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGC 397

Query: 472 HTVCIA 477
           H +  A
Sbjct: 398 HMLVFA 403



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ--INYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ  IN+R PQ VL + +K I QV+ G  
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVI-QVACGGG 291

Query: 78  HSAAWT 83
           H+   T
Sbjct: 292 HTVVLT 297



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL N+ N   P  V     K I  +S G 
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCGY 237

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 238 YHSAFVT 244



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 15/83 (18%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN--------QINYREPQL 60
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+        QI +  P  
Sbjct: 119 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSD 178

Query: 61  VLALSNKNIRQVSAGRSHSAAWT 83
           +       I+Q+SAG + SAA T
Sbjct: 179 I-------IKQLSAGANTSAALT 194


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 3/94 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIA G  HS  +T +G +Y+FG G +G+LGHG T N   P+++  L+   +++V+ G NH
Sbjct: 231 AIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKIEDLSD--IQAVAAGANH 288

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           ++ +   G+ VY+FG G  G+LG G+T  + TP+
Sbjct: 289 SLALTKSGE-VYSFGRGNTGQLGHGDTDDQLTPK 321



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 3/94 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIA G  HS  +T +G +Y+FG G +GRLGHG T +   P+++  L+   +++++ G NH
Sbjct: 181 AIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLEPKKIEDLSD--IQAIAAGGNH 238

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           ++ +   G  VY+FG G +G+LG G+T  + TP+
Sbjct: 239 SLALTKSGD-VYSFGWGLHGQLGHGDTENQLTPK 271



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 4/94 (4%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIA G  HS  +T +G +Y+FGNG  G LGHG T +   P+++ +L+   V++++ G NH
Sbjct: 132 AIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGNTEDQSTPKKIESLSD--VQAIAAGGNH 188

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           ++ +   G  VY+FG G +G+LG G+T  +  P+
Sbjct: 189 SLALTKSGD-VYSFGFGLFGRLGHGDTDSQLEPK 221



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 4/94 (4%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIA G  HS  +T +G +Y+FG G +GRLGHG T +   P+++  L+   +++++ G  H
Sbjct: 82  AIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSD--IQAIAAGDFH 139

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           ++ +   G  VY+FG+G  G LG GNT  + TP+
Sbjct: 140 SLALTKSGD-VYSFGNGTSG-LGHGNTEDQSTPK 171



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 4/94 (4%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A+A G  HS  +T +G +Y+FG G+ G+LGHG T +   P+++  L    +++++ G  H
Sbjct: 281 AVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGLKD--IQAIAAGDFH 338

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           ++ +   G  VY+FG+G  G LG G+T  +  P+
Sbjct: 339 SLALTKSGD-VYSFGNGTSG-LGHGDTANQLEPK 370



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 3/77 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           +++FG G YG+LGHG T N   P+++  L+   +++++ G NH++ +   G  VY+FG G
Sbjct: 49  VFSFGMGMYGKLGHGDTANQLAPKKIEGLSD--IQAIAAGTNHSLALTKSGD-VYSFGFG 105

Query: 490 EYGKLGLGNTGLKPTPQ 506
            +G+LG GNT  +  P+
Sbjct: 106 LFGRLGHGNTDSQLEPK 122



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  ++ G  H LA++ +G+V+++G  +  QLG G+  +   P+ +  L  K+I+ ++AG 
Sbjct: 279 IQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGL--KDIQAIAAGD 336

Query: 77  SHSAAWT 83
            HS A T
Sbjct: 337 FHSLALT 343



 Score = 42.0 bits (97), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I    +I    I+ GT H LA++ +G V+++G     +LG GN  +  EP+ +  LS 
Sbjct: 72  KKIEGLSDIQA--IAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLS- 128

Query: 67  KNIRQVSAGRSHSAAWT 83
            +I+ ++AG  HS A T
Sbjct: 129 -DIQAIAAGDFHSLALT 144


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 61/95 (64%), Gaps = 2/95 (2%)

Query: 413 AIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +IACG  H+ A   S   LY++G GD+GRLGHG + +  +P+ ++AL  + ++ ++CG +
Sbjct: 70  SIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDS 129

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           H + +  +G+ V ++G  + G+LGLGNT     PQ
Sbjct: 130 HCLAVTMEGE-VQSWGRNQNGQLGLGNTEDSLVPQ 163



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 59/93 (63%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  H+  + S   + ++G G+ G+LGHG T +  +P ++ AL+  H++S++CG +HT
Sbjct: 19  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHT 78

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  ++    +Y++G G++G+LG GN+     PQ
Sbjct: 79  LAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQ 111



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G +HS  +T NG LY +G G YG LG G   +   PE+V +++   +  V+CG  HT
Sbjct: 176 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHT 235

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + ++  G  +Y +G  +YG+LG GN      PQ
Sbjct: 236 ISVSSSG-GIYTYGWSKYGQLGHGNFEDSLVPQ 267



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   VT  G + ++G    G+LG G T +  VP+++ A   V ++ V+ G  H+
Sbjct: 124 IACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHS 183

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V I + G+ +Y +G G YG LGLG+   +  P+
Sbjct: 184 VAITENGE-LYGWGWGRYGNLGLGDRNDRWNPE 215



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 56/86 (65%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V+S+G +YT+G   YG+LGHG   +  VP+++ AL+   +  VS G  H+
Sbjct: 228 VACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHS 287

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + +   G  ++ +G  ++G++G+G+ 
Sbjct: 288 MALTSTG-LLFGWGWNKFGQVGVGDN 312



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 42/75 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A + + I  I+ G  H LAV+  G+V +WG N + QLGLGN  +   PQ + A     
Sbjct: 113 IIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVP 172

Query: 69  IRQVSAGRSHSAAWT 83
           I+ V+AG  HS A T
Sbjct: 173 IKMVAAGAEHSVAIT 187



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           + ++ G++HS  +TS G L+ +G   +G++G G  ++   P +V       V  +SCG  
Sbjct: 278 SQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWR 337

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT+ + +K + V+++G G  G+LG G+T  + +P+
Sbjct: 338 HTIAVTEK-ENVFSWGRGTNGQLGHGDTIDRNSPK 371



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNT-GQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            + A    HI  I+ G +H LA S +  ++++WG     +LG GN  +   PQ ++AL  
Sbjct: 59  QLSALDAQHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQG 118

Query: 67  KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD--IPDHYGHLQNKPLPLIR 124
             I+Q++ G SH  A T       + G   +  L LG  +D  +P      +  P+ ++ 
Sbjct: 119 LRIKQIACGDSHCLAVTMEG-EVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVA 177

Query: 125 A 125
           A
Sbjct: 178 A 178



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 43/71 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V ++ G  H ++VS++G ++ +G +   QLG GN  +   PQ + ALS+K I QVS G 
Sbjct: 225 MVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGW 284

Query: 77  SHSAAWTAPPL 87
            HS A T+  L
Sbjct: 285 RHSMALTSTGL 295



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 33/53 (62%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           ++  +V IS G  H +AV+    VF+WG  ++ QLG G+ I+   P+++ ALS
Sbjct: 325 QDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALS 377



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I AFK + I  ++ G EH +A++  G+++ WG      LGLG++ +   P+ V ++  
Sbjct: 163 QKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDC 222

Query: 67  KNIRQVSAGRSHS 79
             +  V+ G  H+
Sbjct: 223 DKMVMVACGWRHT 235



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 42/75 (56%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + A  +  I  +S G  H +A+++TG +F WG N   Q+G+G+ +++  P  V    +
Sbjct: 267 QKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQD 326

Query: 67  KNIRQVSAGRSHSAA 81
           + + Q+S G  H+ A
Sbjct: 327 QRVVQISCGWRHTIA 341



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           I+CG++H+  VT    ++++G G  G+LGHG T++   P+ + AL+
Sbjct: 332 ISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALS 377



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%)

Query: 20 ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
          IS G  H +A+ +   V +WG   D QLG G+  +   P  + AL  ++I  ++ G  H+
Sbjct: 19 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHT 78

Query: 80 AAWT 83
           A++
Sbjct: 79 LAYS 82


>gi|356523185|ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Glycine max]
          Length = 528

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 1/103 (0%)

Query: 404 ANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +N    Y   IACG +HS V+T  G L TFG G YG+ G G   +   P  V +L    V
Sbjct: 346 SNVTGSYVMDIACGGRHSVVITDAGALLTFGWGLYGQCGQGNNADQLRPTLVPSLLGTRV 405

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           E ++ GL HT+C++  G+ +YAFG  ++G+LG G+   + +P+
Sbjct: 406 EKIAAGLWHTLCVSVNGQ-IYAFGGNQFGQLGTGSDQPETSPR 447



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP     R++     IA G  H+  V+ NG +Y FG   +G+LG G+      P ++ A 
Sbjct: 397 VPSLLGTRVE----KIAAGLWHTLCVSVNGQIYAFGGNQFGQLGTGSDQPETSPRQLDAS 452

Query: 458 -LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
                H   VSCG  H+  + D G  ++ +G  +YG+LGLG++
Sbjct: 453 RFENKHSSIVSCGARHSALLTDDGH-LFTWGWNKYGQLGLGDS 494



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 4/94 (4%)

Query: 386 TGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT 445
           TG   P  +  Q     F N+   + + ++CG +HSA++T +G+L+T+G   YG+LG G 
Sbjct: 437 TGSDQPETSPRQLDASRFENK---HSSIVSCGARHSALLTDDGHLFTWGWNKYGQLGLGD 493

Query: 446 TMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           +++  +P + V++      +V+CG  HT+ + DK
Sbjct: 494 SVDRNIPGQ-VSIAGCRPRNVACGWWHTLLMGDK 526



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSNKNIRQVS 73
           + I  ++VG  H LA+S+ GQV+ WG   + QLGLG+++     P L+  + +    + S
Sbjct: 274 VKITSVAVGGRHTLALSDVGQVWGWGYGGEGQLGLGSRVKMVSSPHLIPCIESSGKDKSS 333

Query: 74  AGRSHSAA 81
           A    S A
Sbjct: 334 AFHQGSGA 341



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           +P+     +  I+ G  H L VS  GQ++A+G N   QLG G+      P+ + A    N
Sbjct: 397 VPSLLGTRVEKIAAGLWHTLCVSVNGQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFEN 456

Query: 67  KNIRQVSAGRSHSA 80
           K+   VS G  HSA
Sbjct: 457 KHSSIVSCGARHSA 470



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 4   TSGRHIPA--FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           TS R + A  F+N H   +S G  H   +++ G +F WG N   QLGLG+ ++   P  V
Sbjct: 444 TSPRQLDASRFENKHSSIVSCGARHSALLTDDGHLFTWGWNKYGQLGLGDSVDRNIPGQV 503

Query: 62  LALSNKNIRQVSAGRSHS 79
            +++    R V+ G  H+
Sbjct: 504 -SIAGCRPRNVACGWWHT 520


>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
           [Desmodus rotundus]
          Length = 511

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V  +G +Y +G    G+
Sbjct: 163 GCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQ 222

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + V+ V+CG  HT+ + D G+ VYA+G   YG+LG GN  
Sbjct: 223 LGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQ-VYAWGANSYGQLGTGNKS 281

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 282 NQSYPTP 288



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 5/111 (4%)

Query: 398 SVPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           SVP   +  L   +   +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV 
Sbjct: 126 SVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQPIPRRVT 185

Query: 457 AL--NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               N+V V +++CG   ++ + D G+ VY +G    G+LGLG++G   TP
Sbjct: 186 GCLQNRV-VVNIACGQMCSMAVVDSGE-VYVWGYNGNGQLGLGSSGNHSTP 234



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG H     I A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 226 GSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSNQSY 285

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 286 PTPVVVEKDRIIEIAACHSTHTSA 309



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 43/94 (45%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G  S P   A         +ACG+ H+ V+T +G +Y +G   YG+LG G   N   P 
Sbjct: 228 SGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSNQSYPT 287

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            VV      +E  +C   HT     +G  VY +G
Sbjct: 288 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 321



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV ++G+V+ WG N + QLGLG+  N+  P  + AL  
Sbjct: 183 RVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQG 242

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 243 IRVQRVACGYAHTLVLT 259



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 96  HIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTS 155

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 156 DGE-VFAWGCNNSGQVGSGSTANQPIPR 182



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L N+ + 
Sbjct: 135 LSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVV 194

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 195 NIACGQMCSMA 205



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+  QLG G   +   P  +   L
Sbjct: 76  RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNL 135

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 136 SNKQVIEVACGSYHSLVLTS 155


>gi|426395579|ref|XP_004064048.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Gorilla gorilla gorilla]
          Length = 803

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 54  VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 112

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 113 TALITDIG-LMYTFGDGRHGKLGLG 136



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 24/95 (25%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG--------HGT-TMNWKVPERVVALNKVH 462
           A I C       + ++G LY FG  + G+LG        H T  +  ++PE+V+      
Sbjct: 4   AVIKC-----QELLADGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI------ 52

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              V+CG  HTV + +   AVY FG G++G+LGLG
Sbjct: 53  --QVACGGEHTVVLTE--NAVYTFGLGQFGQLGLG 83



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 106 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 165

Query: 472 HTVCIA 477
           H V  A
Sbjct: 166 HMVVFA 171


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 11/103 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+ TSNG LYTFG+G YG LGHG   +   P  V  L+ +    V+CG+ H
Sbjct: 377 SVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWH 436

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           T  I +           + ++ +GDG+  +LG GN  T L PT
Sbjct: 437 TAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPT 479



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  +TS+  LYT+G+G +  G LGHGT ++  +P+RVV +L  + V SV+CG 
Sbjct: 323 VACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGT 382

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK +Y FGDG YG LG G+
Sbjct: 383 WHSALATSNGK-LYTFGDGTYGVLGHGD 409



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 5/82 (6%)

Query: 399 VPLTFANRL--QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           +P    +RL  ++ E  I+CG  H+ V+TS   ++++G G  GRLGHG   + K P  + 
Sbjct: 528 IPCLVQDRLVGEFVEE-ISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIE 586

Query: 457 ALNKVHVESVSCGLNHT--VCI 476
           AL   HV+S+SCG N T  +CI
Sbjct: 587 ALKDRHVKSISCGSNFTASICI 608



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H A+VT  G ++T+G    GRLGHG   ++  P  V  L   HV+ V+CG  HT
Sbjct: 271 IACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHT 330

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
            C       +Y +GDG +  G LG G
Sbjct: 331 -CAITSSNDLYTWGDGIFNSGILGHG 355



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 7/110 (6%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT---MNWKVPERV 455
           +P   ++ + Y    +ACG   +  +T++G+++T G   YG+LG+ ++   +   V +R+
Sbjct: 477 LPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFTMGGTAYGQLGNPSSDGVIPCLVQDRL 536

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           V      VE +SCG  HTV +  + + V+++G G  G+LG G+   +  P
Sbjct: 537 VG---EFVEEISCGAYHTVVLTSRNE-VFSWGRGSNGRLGHGDVEDRKAP 582



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVVT----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  H+A +           S+  L+T+G+GD  RLGHG    + +P  V +L   + 
Sbjct: 430 VACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNF 489

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             ++CG N TV +   G  V+  G   YG+LG
Sbjct: 490 HQLACGHNMTVALTTSGH-VFTMGGTAYGQLG 520



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 42/65 (64%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  H + +++  +VF+WG  S+ +LG G+  + + P L+ AL +++++ +S G 
Sbjct: 541 VEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGS 600

Query: 77  SHSAA 81
           + +A+
Sbjct: 601 NFTAS 605



 Score = 45.1 bits (105), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 36/70 (51%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G  H+  V+  G+VF WG     +LG G   ++  P LV  L+  ++  V+ 
Sbjct: 266 LDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVAC 325

Query: 75  GRSHSAAWTA 84
           G  H+ A T+
Sbjct: 326 GEYHTCAITS 335



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 89/229 (38%), Gaps = 50/229 (21%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV----SNTG------QVFAWGNNSDAQLGLGNQINYR 56
           R +     +  + ++ G  H  A+    S TG      ++F WG+    +LG GN+  Y 
Sbjct: 417 REVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYL 476

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQ 116
            P  V +L + N  Q++ G + + A T       T GH       +G        YG L 
Sbjct: 477 LPTCVSSLIDYNFHQLACGHNMTVALT-------TSGHV----FTMG-----GTAYGQLG 520

Query: 117 NKP----LP-LIRARL--KLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSW-------L 162
           N      +P L++ RL  + +   S   Y  V L     V         +SW       L
Sbjct: 521 NPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEV---------FSWGRGSNGRL 571

Query: 163 VHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTV 211
            H  +    AP +      R V K++  G NF  S+ + +  + + Q+V
Sbjct: 572 GHGDVEDRKAPTLIEALKDRHV-KSISCGSNFTASICIHKWVSGADQSV 619


>gi|392348288|ref|XP_003750059.1| PREDICTED: E3 ubiquitin-protein ligase HECTD3-like [Rattus
           norvegicus]
          Length = 692

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 396 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 455

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 456 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 511

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + GV +  F      E  F       ++  ++ GG 
Sbjct: 512 SWSKDFPAVDSVLVKLLEV-----MEGVDKETFEFKFGKELTFTTVLSDQQVVELIPGGT 566

Query: 398 SVPLTFANRLQYYE 411
            + + + +RL++ +
Sbjct: 567 GIVVGYEDRLRFIQ 580


>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
           familiaris]
 gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 1003

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +H+AVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           +   + GK VYA G    G+LGLG+T  + T
Sbjct: 100 LVSTEGGK-VYAAGGNNEGQLGLGDTEERST 129



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT +    VP+ +  +    +  ++CG NH
Sbjct: 248 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDMG-LMYTFGDGRHGKLGLG 330



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT+ G LYTFG  + G+LG  +   +N ++P+ V  +    V+ V+CG  
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  KAVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--KAVYTFGLGQFGQLGLG 277



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
           IACG  H+A++T  G +YTFG+G +G+LG G   + N  +P       +  V+ VSCG  
Sbjct: 300 IACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGC 359

Query: 472 HTVCIA 477
           HT+  A
Sbjct: 360 HTLVFA 365



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     +    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +  +G+ +Y FG+ E GKLGL N
Sbjct: 203 AFVTTEGQ-LYTFGEPECGKLGLPN 226



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K I  +S G 
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGY 199

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 200 YHSAFVT 206



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   F+N     +S G EH   V+   +++ +G+N+  QLGLG++    +P  V 
Sbjct: 23  AENIPSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVK 82

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++  + GR+H+   T
Sbjct: 83  ALKPEKVKFAACGRNHTLVST 103



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G+V+A G N++ QLGLG+        L+    S +
Sbjct: 81  VKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR 140

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156


>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1055

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 6/88 (6%)

Query: 417 GFKHSAVVT------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           G  HS  VT       +G L+TFG+G +G+LGHG+T N  +P RV+ L    V  ++CG 
Sbjct: 285 GCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVSQITCGR 344

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           +HT+  A     VYAFG   +G+LG G 
Sbjct: 345 HHTLAFAPSSGVVYAFGGNSHGQLGTGE 372



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 9/87 (10%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGH---GTTMNWKVPERVVALNKVHVESVSCGLNH 472
           CG +HS  +  +G +YT G+   G+LGH   GT+     PE V AL+   +  VSCG  H
Sbjct: 40  CGGQHSVFLLHDGSVYTCGSNGCGQLGHNKPGTS-----PELVGALDTQRITLVSCGQAH 94

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           ++ + ++G+ V+A+G G+ G+LGLG T
Sbjct: 95  SMAVNEQGQ-VFAWGAGDGGQLGLGTT 120



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 2/102 (1%)

Query: 3   GTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLV 61
           GTS   + A     I  +S G  H +AV+  GQVFAWG     QLGLG  +   R P+L+
Sbjct: 71  GTSPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLI 130

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG 103
             L +  I QV  G  H  A +       T G   S  L LG
Sbjct: 131 KRLCDHRIAQVMCGNQHCIALSKDG-QLFTWGQNTSGQLGLG 171



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  HS  V   G ++ +G GD G+LG GTT    ++P  +  L    +  V CG  H
Sbjct: 88  VSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQH 147

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKPTP 505
            + ++  G+ ++ +G    G+LGLG    + L P P
Sbjct: 148 CIALSKDGQ-LFTWGQNTSGQLGLGKGEPSKLFPQP 182



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + +   I +  I+ G +H  A+S +G VF WG N   QLGL +  +   P  +  L ++ 
Sbjct: 183 LKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQK 242

Query: 69  IRQVSAGRSHSAAWT 83
           +  +S G  H+AA T
Sbjct: 243 VVHISCGDEHTAALT 257



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALS 65
           R I    +  I  +  G +H +A+S  GQ+F WG N+  QLGLG  + +   PQ + +L+
Sbjct: 128 RLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLA 187

Query: 66  NKNIRQVSAGRSHSAA 81
              + +++AG  HS A
Sbjct: 188 GIPLAKITAGGDHSFA 203



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 2/95 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGL 470
           A + CG +H   ++ +G L+T+G    G+LG G     K+ P+ + +L  + +  ++ G 
Sbjct: 139 AQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGG 198

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +H+  ++  G AV+ +G  + G+LGL +   +  P
Sbjct: 199 DHSFALSLSG-AVFGWGKNKAGQLGLNDIQDRAVP 232


>gi|224031923|gb|ACN35037.1| unknown [Zea mays]
          Length = 220

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V+ +G LYT+G   YG+LGHG   +  VP +V AL    +  +S G  HT
Sbjct: 4   VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHT 63

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +  +GK +Y +G  ++G++G+GN     +P
Sbjct: 64  MALTSEGK-LYGWGWNKFGQVGVGNNDDHSSP 94



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           + I+ G++H+  +TS G LY +G   +G++G G   +   P +V       +  V+CG  
Sbjct: 54  SQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWR 113

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT+ +++K K V+++G G  G+LG G    + TP
Sbjct: 114 HTLALSEK-KNVFSWGRGTSGQLGNGEIVDRNTP 146



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K+  I  IS G  H +A+++ G+++ WG N   Q+G+GN  ++  P  V    ++ 
Sbjct: 45  VEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQK 104

Query: 69  IRQVSAGRSHSAA 81
           I QV+ G  H+ A
Sbjct: 105 ISQVACGWRHTLA 117



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 39/68 (57%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          +V ++ G  H + VS++G ++ +G +   QLG G+  ++  P  V AL +  I Q+S G 
Sbjct: 1  MVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGW 60

Query: 77 SHSAAWTA 84
           H+ A T+
Sbjct: 61 RHTMALTS 68



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN-----KNIRQ 71
           I  ++ G  H LA+S    VF+WG  +  QLG G  ++   P L+ ALS+     K +  
Sbjct: 105 ISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSDGSACKKLES 164

Query: 72  VSAGRSHSAAWTAP 85
            +A    +  W +P
Sbjct: 165 STAAPFAAKVWVSP 178


>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Ailuropoda melanoleuca]
          Length = 1011

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG N
Sbjct: 48  AFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRN 107

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           HT+   + GK VYA G    G+LGLG+T
Sbjct: 108 HTLVSTEGGK-VYASGGNNEGQLGLGDT 134



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 6/94 (6%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT+ G LYTFG  + G+LG      +N ++P+ V  + +  V+ V+CG  
Sbjct: 205 ISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEKVVQ-VACGGG 263

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HTV + +  KAVY FG G++G+LGLG T L  TP
Sbjct: 264 HTVVLTE--KAVYTFGLGQFGQLGLG-TFLFETP 294



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT +    VP+ +  +  + + S+ CG NH
Sbjct: 258 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENH 316

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 317 TALITDLG-LMYTFGDGRHGKLGLG 340



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCG 469
           ++I CG  H+A++T  G +YTFG+G +G+LG G     N   P       +  V+ V+CG
Sbjct: 308 SSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACG 367

Query: 470 LNHTVCIA 477
             HT+  A
Sbjct: 368 GCHTLVFA 375



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 5/92 (5%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K I  +S G 
Sbjct: 152 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTV--GKPISWISCGY 209

Query: 77  SHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI 108
            HSA  T      +T G   S   +LGLP+ +
Sbjct: 210 YHSAFVTTEG-ELYTFGEPESG--KLGLPKQL 238



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FKN     +S G EH   V+   +++ +G+N+  QLGLG++    +P  V 
Sbjct: 33  AENIPSKFWFKNDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVK 92

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++  + GR+H+   T
Sbjct: 93  ALKPEKVKFAACGRNHTLVST 113



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G+V+A G N++ QLGLG+        L+    S +
Sbjct: 91  VKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQR 150

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 151 KIKQLSAGSNTSAALT 166


>gi|118404960|ref|NP_001072497.1| HECT domain containing E3 ubiquitin protein ligase 3 [Xenopus
           (Silurana) tropicalis]
 gi|112418518|gb|AAI21929.1| HECT domain containing 3 [Xenopus (Silurana) tropicalis]
          Length = 845

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 59/269 (21%)

Query: 166 SLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKM 225
           +++P F P +Y       + + + V     PS     L    K+TV   F+Q+   +   
Sbjct: 449 TMKPDFMPCLY-------INRRIAVEHRDNPS-----LDPSYKKTV---FSQVYEGLKLT 493

Query: 226 KGS----DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLL 272
             S    D R P R    W+ K + EG  D GG F D++ ++  EL   +      +P  
Sbjct: 494 DKSEKPLDYRWPVRYEQWWECKFIAEGIIDQGGGFRDSLADISEELCPSSADIPVPLPFF 553

Query: 273 VRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWK 332
           VRT N    TG  +D Y+ NP    S + L  ++++G L G A+R K+ L L L  LVWK
Sbjct: 554 VRTSNQGNGTGEAQDMYVPNP----SCKDLAKYEWIGQLMGAALRGKEFLVLALPGLVWK 609

Query: 333 LIVQEPVTFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRIT- 390
            +  E V+++ D    D+L  + L  +              E++  E FE   ++G +T 
Sbjct: 610 QLTGEEVSWSKDFPAVDSLLVKLLEMM--------------ELMDEETFE-FKFSGELTY 654

Query: 391 ----------PIVTGGQSVPLTFANRLQY 409
                      +V GG ++ + + +R+++
Sbjct: 655 TTVLSDQKMVELVPGGSNISVLYKDRVEF 683


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G Y  G LGHG  ++  VP+RV   L  +HV S+SCG 
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 426

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 427 WHTAVVTSAGQ-LFTFGDGTFGVLGHGD 453



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+AVVTS G L+TFG+G +G LGHG   +  +P+ V +L  +     +CG+ 
Sbjct: 420 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVW 479

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   K  P
Sbjct: 480 HTAAVIEVMVGNSSSSNCSSGK-LFTWGDGDKGRLGHGDKEAKLVP 524



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + AL+  ++E V+CG  HT
Sbjct: 315 IACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHT 374

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             +   G  +Y +GDG Y  G LG GN
Sbjct: 375 CAVTLSGD-LYTWGDGTYNFGLLGHGN 400



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 38/64 (59%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V+S++CG + T
Sbjct: 590 IACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTSFT 649

Query: 474 VCIA 477
             I 
Sbjct: 650 AAIC 653



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +   T++G++YT G+  YG+LG+    + K+P RV   
Sbjct: 523 VPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGN-PLADGKLPTRVEGK 581

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE ++CG  H   +  K + VY +G G  G+LG G+T  + +P
Sbjct: 582 LSKSFVEEIACGAYHVAVLTSKTE-VYTWGKGANGRLGHGDTDDRNSP 628



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G +H   V+  G++F+WG  S  +LG G   +   P+L+ ALSN NI  V+ 
Sbjct: 310 LDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVAC 369

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 370 GEYHTCAVT 378



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD GRLGHG      VP  V AL + +
Sbjct: 475 ACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 534

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV     G  VY  G   YG+LG
Sbjct: 535 FCQVACGHSLTVARTTSGH-VYTMGSPVYGQLG 566



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K ++ ++ G 
Sbjct: 587 VEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 646

Query: 77  SHSAA 81
           S +AA
Sbjct: 647 SFTAA 651



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ +   LG G++ +   P+ V +L      Q
Sbjct: 414 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQ 473

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 474 AACGVWHTAA 483


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1045

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 11/103 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+ T+NG L+TFG+G +G LGHG   +   P+ V +LN +    V+C + H
Sbjct: 362 SVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWH 421

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           T  I +           + ++ +GDG+  +LG GN  T L PT
Sbjct: 422 TAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPT 464



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 6/99 (6%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRL--QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYG 439
           G +  G++   ++ G+ +P    +RL  ++ E  IACG  H AV+TS   ++T+G G  G
Sbjct: 497 GGTAHGQLGNSISDGK-LPCLVQDRLVGEFVEE-IACGAHHVAVLTSRSEVFTWGKGANG 554

Query: 440 RLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT--VCI 476
           RLGHG T + + P  V AL   HV+S+SCG N T  +CI
Sbjct: 555 RLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICI 593



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+ VV+++G L+++G+G  + G LGHG+ ++  +P+RV   L  + V SV+CG 
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGT 367

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK ++ FGDG +G LG GN
Sbjct: 368 WHSALATANGK-LFTFGDGAFGVLGHGN 394



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG +H A+VT  G ++T+G    GRLGHG  ++   P+ V  L   +++ V+CG  HT
Sbjct: 256 IVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHT 315

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLGN 498
            C+      ++++GDG    G LG G+
Sbjct: 316 -CVVSTSGDLFSWGDGIHNVGLLGHGS 341



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 9/111 (8%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP----ER 454
           +P   ++ + Y    IACG   +  +T++G+++T G   +G+LG+  + + K+P    +R
Sbjct: 462 LPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDR 520

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +V      VE ++CG +H   +  + + V+ +G G  G+LG G+T  K TP
Sbjct: 521 LVG---EFVEEIACGAHHVAVLTSRSE-VFTWGKGANGRLGHGDTEDKRTP 567



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           ++ AAI      +A   S+  L+T+G+GD  RLGHG    + +P  V +L   +   ++C
Sbjct: 420 WHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIAC 479

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G   TV +   G  V+  G   +G+LG
Sbjct: 480 GHTFTVALTTSGH-VFTMGGTAHGQLG 505



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 41/65 (63%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +VF WG  ++ +LG G+  + R P LV AL +++++ +S G 
Sbjct: 526 VEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGS 585

Query: 77  SHSAA 81
           + +++
Sbjct: 586 NFTSS 590



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 34/66 (51%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I  G  HV  V+  G+VF WG     +LG G Q++   P+LV  L+  NI  V+ 
Sbjct: 251 LDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVAC 310

Query: 75  GRSHSA 80
           G  H+ 
Sbjct: 311 GEYHTC 316


>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
           boliviensis boliviensis]
          Length = 1170

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G  + G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNDEGQLGLGDTEERTT 129



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 3/84 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG +HS V+T N  LYTFG G +G+LG GT +      RVV ++    +  +SCG NH
Sbjct: 248 VACGGEHSVVLTEND-LYTFGLGKFGQLGLGTFLFETSEPRVVESIKGRKISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGL 496
              + D G  +Y FGDG +GKLGL
Sbjct: 307 AALLTDTG-LMYTFGDGRHGKLGL 329



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG  +    N ++P+ V  + +  ++ V+CG  
Sbjct: 195 ISCGYYHSAFVTTDGELYIFGEPENGKLGLPYELLSNHRIPQLVPEIPEKVIQ-VACGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           H+V + +    +Y FG G++G+LGLG
Sbjct: 254 HSVVLTE--NDLYTFGLGKFGQLGLG 277



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVAVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG       N  +P     L K  V+ V+CG  
Sbjct: 300 ISCGENHAALLTDTGLMYTFGDGRHGKLGLELENFTNQFIPILCSYLLKYKVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVVFA 365



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS-NK 67
           + A K   +   + G  H L  +  G V+A G N + QLGLG+        L+   +   
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHLISFFTPQH 140

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G+    A++  G++F WG+NS+ Q+GL +  N   P  V   + K +  +S G 
Sbjct: 142 IKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQV--TTGKPVSWISCGY 199

Query: 77  SHSA 80
            HSA
Sbjct: 200 YHSA 203


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  HS  VT +G LYT+G+G  ++G LGHG +++   P+RV   L  V V SV+CG 
Sbjct: 180 VACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGP 239

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HTV +   G+ +++FGDG +G LG G+      P+
Sbjct: 240 WHTVLVTSTGQ-LFSFGDGTFGVLGHGDRKSASMPR 274



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + +L    V+ V+CG  H+
Sbjct: 128 IACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHS 187

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLGNTGLKPTPQ 506
             +   G  +Y +GDG   +G LG GN+    TP+
Sbjct: 188 CAVTQSGD-LYTWGDGTHNFGLLGHGNSISHWTPK 221



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +++ACG  H+ +VTS G L++FG+G +G LGHG   +  +P  V +L  +     +CG  
Sbjct: 233 SSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPW 292

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+  +LG G+   K  P
Sbjct: 293 HTAAVVEVMSRYSNAGSSLSGK-LFTWGDGDKNRLGHGDKEQKLVP 337



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           VP   A  + +    +ACG   +  +T+ G+LYT G+  YG+LG       ++P  V+ L
Sbjct: 336 VPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATG-RLPG-VLRL 393

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +  +E VSCG  H   +  KG  V  +G G  G+LG G+   +  P
Sbjct: 394 GRTLIEEVSCGAYHVAALTSKGD-VCTWGKGANGRLGHGDAEDRDVP 439



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG  H A +TS G + T+G G  GRLGHG   +  VP  V AL    V+ VSCG + T
Sbjct: 401 VSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFT 460

Query: 474 --VCIADKGKAV 483
             +C+   G  V
Sbjct: 461 SAICLHKSGPGV 472



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + +   + +  I+ G  H   V+  G+VF+WG  S  +LG G   +   PQL+ +L++
Sbjct: 115 RAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLAS 174

Query: 67  KNIRQVSAGRSHSAAWT 83
             ++ V+ G  HS A T
Sbjct: 175 STVQYVACGEYHSCAVT 191



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I ++S G  HV A+++ G V  WG  ++ +LG G+  +   P LV AL +K +++VS G 
Sbjct: 398 IEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGS 457

Query: 77  SHSAA 81
           S ++A
Sbjct: 458 SFTSA 462



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD  RLGHG      VP  V AL   +
Sbjct: 288 ACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHN 347

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G  +Y  G   YG+LG
Sbjct: 348 FRQVACGHSLTVALTTTGH-LYTMGSVSYGQLG 379



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 25/156 (16%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  +  + G  H  AV            S +G++F WG+    +LG G++  
Sbjct: 274 REVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQ 333

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPS-SSLRLGLPQDIPDHYG 113
              P  V AL + N RQV+ G S + A T       T GH  +  S+  G   D P   G
Sbjct: 334 KLVPTCVAALVDHNFRQVACGHSLTVALT-------TTGHLYTMGSVSYGQLGD-PQATG 385

Query: 114 HLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNV 149
            L      ++R    L+   S   Y V  L   G+V
Sbjct: 386 RLPG----VLRLGRTLIEEVSCGAYHVAALTSKGDV 417


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 11/103 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+ T+NG L+TFG+G +G LGHG   +   P+ V +LN +    V+C + H
Sbjct: 362 SVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWH 421

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           T  I +           + ++ +GDG+  +LG GN  T L PT
Sbjct: 422 TAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPT 464



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+ VV+++G L+++G+G  + G LGHG+ ++  +P+RV   L  + V SV+CG 
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGT 367

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK ++ FGDG +G LG GN
Sbjct: 368 WHSALATANGK-LFTFGDGAFGVLGHGN 394



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 6/99 (6%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRL--QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYG 439
           G +  G++   ++ G+ +P    +RL  ++ E  IACG  H AV+TS   ++T+G G  G
Sbjct: 497 GGTAHGQLGNSISDGK-LPCLVQDRLVGEFVEE-IACGDHHVAVLTSRSEVFTWGKGANG 554

Query: 440 RLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT--VCI 476
           RLGHG T + + P  V AL   HV+S+SCG N T  +CI
Sbjct: 555 RLGHGDTEDKRTPTCVEALRDRHVKSLSCGSNFTSSICI 593



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG +H A+VT  G ++T+G    GRLGHG  ++   P+ V  L   +++ V+CG  HT
Sbjct: 256 IVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHT 315

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLGN 498
            C+      ++++GDG    G LG G+
Sbjct: 316 -CVVSTSGDLFSWGDGIHNVGLLGHGS 341



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 9/111 (8%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP----ER 454
           +P   ++ + Y    IACG   +  +T++G+++T G   +G+LG+  + + K+P    +R
Sbjct: 462 LPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDR 520

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +V      VE ++CG +H   +  + + V+ +G G  G+LG G+T  K TP
Sbjct: 521 LVG---EFVEEIACGDHHVAVLTSRSE-VFTWGKGANGRLGHGDTEDKRTP 567



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVVT----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +AC   H+A +           S+  L+T+G+GD  RLGHG    + +P  V +L   + 
Sbjct: 415 VACSIWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNF 474

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             ++CG   TV +   G  V+  G   +G+LG
Sbjct: 475 HKIACGHTFTVALTTSGH-VFTMGGTAHGQLG 505



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 40/65 (61%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +VF WG  ++ +LG G+  + R P  V AL +++++ +S G 
Sbjct: 526 VEEIACGDHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTCVEALRDRHVKSLSCGS 585

Query: 77  SHSAA 81
           + +++
Sbjct: 586 NFTSS 590



 Score = 45.4 bits (106), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 34/66 (51%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I  G  HV  V+  G+VF WG     +LG G Q++   P+LV  L+  NI  V+ 
Sbjct: 251 LDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVAC 310

Query: 75  GRSHSA 80
           G  H+ 
Sbjct: 311 GEYHTC 316


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 10/102 (9%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A+V+S+G L+T+G+G +G LGHG  ++   P+ V +L  + V+SV+CG  HT
Sbjct: 417 VACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHT 476

Query: 474 VCIAD----------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             I D           G  ++ +GDG+ G+LG  +   K  P
Sbjct: 477 AAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLP 518



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 1/79 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G KH+A++T  G ++ +G G  G+LGH   M+   P+ V +L+ VHV+SV+CG   T
Sbjct: 310 ISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQT 369

Query: 474 VCIADKGKAVYAFGDGEYG 492
             + D G+ +YA+G+ +YG
Sbjct: 370 CALTDSGE-LYAWGENKYG 387



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVVTS-----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           ++ACG  H+A +              G L+T+G+GD GRLGH       +P  V  L ++
Sbjct: 468 SVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVEL 527

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             + VSCG   TV + + GK VY  G   +G+LG
Sbjct: 528 DFDQVSCGRMLTVALTNTGK-VYTMGSSVHGQLG 560



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+S  G++       +S+ +      + +   I+ G  H A +TS+G LYT+G G  G+L
Sbjct: 552 GSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGSLYTWGKGTNGQL 611

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           G G   +   P  V AL  + V+S++CG N T  I 
Sbjct: 612 GLGNVEDRNFPTLVEALRDMQVQSIACGSNLTAAIC 647



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 43/70 (61%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            K   + +IS G+ HV A++++G ++ WG  ++ QLGLGN  +   P LV AL +  ++ 
Sbjct: 576 LKEEFVKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQS 635

Query: 72  VSAGRSHSAA 81
           ++ G + +AA
Sbjct: 636 IACGSNLTAA 645



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYG-RLG--HGTTMNWKVPERVVA-LNKVHVESVSC 468
           ++ACG   +  +T +G LY +G   YG  LG    +   W +P R+   L  V + +V+C
Sbjct: 361 SVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQW-LPRRISGPLTGVCILNVAC 419

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           G  HT  ++  G+ ++ +GDG +G LG GN
Sbjct: 420 GDWHTAIVSSSGQ-LFTYGDGSFGVLGHGN 448



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS+G +H   ++  G+VF WG  S  +LG    ++   P++V +L   +++ V+ 
Sbjct: 305 LDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVAC 364

Query: 75  GRSHSAAWT 83
           G   + A T
Sbjct: 365 GEYQTCALT 373



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 1/107 (0%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P   A  ++     ++CG   +  +T+ G +YT G+  +G+LG+    +  +      L
Sbjct: 517 LPTCVAQLVELDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKL 576

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +  V+ +S G  H   +   G ++Y +G G  G+LGLGN   +  P
Sbjct: 577 KEEFVKEISSGSYHVAALTSSG-SLYTWGKGTNGQLGLGNVEDRNFP 622


>gi|149063422|gb|EDM13745.1| rCG21660 [Rattus norvegicus]
          Length = 1545

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 147/337 (43%), Gaps = 35/337 (10%)

Query: 105  PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
            P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 1044 PADATDPRMACLSNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTPMYAHSIAALL 1101

Query: 164  HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
              +   +F     T+ + R +  T+     +  P +T+  L T   + + +    F Q +
Sbjct: 1102 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLETVGGEIRASENSYFCQAA 1160

Query: 220  RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
            RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 1161 RQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 1220

Query: 273  VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L P  W
Sbjct: 1221 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDLLPSFW 1276

Query: 332  KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII-----------PLEC 379
            K +V EP+    DL++ D L    ++    I+     EA   EI            P  C
Sbjct: 1277 KTLVGEPLDPDQDLQEADILTYNYVKKFESINDESELEALCAEIASQHLATDSPEGPKPC 1336

Query: 380  --FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
              F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 1337 CRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 1372


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+ TS+G LYTFG+G +G LGHG       P+ V AL+      V+CG+ H
Sbjct: 367 SVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWH 426

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  I +           K +Y +GDG+  +LG G+   +  P+
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPK 469



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 382 GASWTGRI-TPIVTGGQSVPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYG 439
           G+S  G++  P   G Q  P    +RL       I+CG  H  V+TS   +YT+G G  G
Sbjct: 502 GSSSNGQLGNPKSDGKQ--PCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANG 559

Query: 440 RLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           RLGHG   + K P  V AL   HV+S+SCG N T CI 
Sbjct: 560 RLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCIC 597



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H A+ T  G ++T+G    GRLGHGT  +   P+ V +L+   V+ +SCG  HT
Sbjct: 261 IACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHT 320

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             +   G  ++ +GDG Y  G LG G
Sbjct: 321 CAVTTSGD-LFNWGDGSYNVGLLGCG 345



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  HSA +            +  LYT+G+GD  RLGHG      VP+ V AL + + 
Sbjct: 420 VACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNF 479

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             ++CG N TV +A  G+ V+  G    G+LG
Sbjct: 480 HQLACGHNMTVALATSGR-VFTMGSSSNGQLG 510



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-A 457
           VP      L+Y    +ACG   +  + ++G ++T G+   G+LG+  + + K P  V   
Sbjct: 467 VPKCVQALLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKS-DGKQPCLVQDR 525

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L    VE +SCG +H   +  + + VY +G G  G+LG G+   +  P
Sbjct: 526 LASELVEEISCGASHVTVLTSRSE-VYTWGMGANGRLGHGDLKDRKKP 572



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 38/59 (64%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  + ++P LV AL +++++ +S G
Sbjct: 531 VEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCG 589



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 35/69 (50%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ GT HV   +  G+VF WG     +LG G   +   P+LV +LS   +  +S 
Sbjct: 256 LDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISC 315

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 316 GEFHTCAVT 324


>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
           cuniculus]
          Length = 882

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 4/97 (4%)

Query: 403 FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           F N +  Y   ++CG +H+AVVT N  LY FG+ ++G+LG G+      P  V AL    
Sbjct: 32  FKNDVPTY---LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEK 88

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           V+ V+CG NHT+   ++G  VYA G    G+LGLG+T
Sbjct: 89  VKYVACGRNHTLVSTEEGN-VYATGGNNDGQLGLGDT 124



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT +      + +   K H + S+SCG NH
Sbjct: 248 VACGGGHTVVLTET-IVYTFGLGQFGQLGLGTFIFETSEPKAIEYIKDHKISSISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I + G+ +Y FGDG YGKLGLG
Sbjct: 307 TALITELGR-MYTFGDGRYGKLGLG 330



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG      +N K P+ V  + +  ++ V+CG  
Sbjct: 195 ISCGYYHSAFVTMDGELYTFGECENGKLGLPEELLINHKTPQLVTRIPEKVIQ-VACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +    VY FG G++G+LGLG
Sbjct: 254 HTVVLTE--TIVYTFGLGQFGQLGLG 277



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCG 469
           ++I+CG  H+A++T  G +YTFG+G YG+LG G     N  VP       +  ++ V+CG
Sbjct: 298 SSISCGENHTALITELGRMYTFGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACG 357

Query: 470 LNHTVCIA 477
             H V  A
Sbjct: 358 GCHMVIFA 365



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           P++F    Q+    ++ G   SA +T NG L+ +G+   G++G     N  VP +V    
Sbjct: 132 PISFFTS-QHKIKQLSAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVCVPHQVTIGK 190

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
            +    +SCG  H+  +   G+ +Y FG+ E GKLGL
Sbjct: 191 PISW--ISCGYYHSAFVTMDGE-LYTFGECENGKLGL 224



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FKN     +S G EH   V+   +++ +G+N+  QLGLG++    +P  V 
Sbjct: 23  AENIPSKFWFKNDVPTYLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVK 82

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++ V+ GR+H+   T
Sbjct: 83  ALKPEKVKYVACGRNHTLVST 103



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 10/110 (9%)

Query: 4   TSGRH----IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
           T GR+    I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   P
Sbjct: 124 TEGRNTFYPISFFTSQHKIKQLSAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVCVP 183

Query: 59  QLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI 108
             V     K I  +S G  HSA  T      +T G   +   +LGLP+++
Sbjct: 184 HQVTI--GKPISWISCGYYHSAFVTMDG-ELYTFGECENG--KLGLPEEL 228



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSN 66
           + A K   +  ++ G  H L  +  G V+A G N+D QLGLG+    N   P +    S 
Sbjct: 81  VKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYP-ISFFTSQ 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAALT 156


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 11/103 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+ T+NG L+TFG+G +G LGHG   +   P+ V +LN +    V+C + H
Sbjct: 371 SVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWH 430

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           T  I +           + ++ +GDG+  +LG GN  T L PT
Sbjct: 431 TAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPT 473



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 6/99 (6%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRL--QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYG 439
           G +  G++   ++ G+ +P    +RL  ++ E  IACG  H AV+TS   ++T+G G  G
Sbjct: 506 GGTAHGQLGNSISDGK-LPCLVQDRLVGEFVEE-IACGAHHVAVLTSRSEVFTWGKGANG 563

Query: 440 RLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT--VCI 476
           RLGHG T + + P  V AL   HV+S+SCG N T  +CI
Sbjct: 564 RLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICI 602



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+ VV+++G L+++G+G  + G LGHG+ ++  +P+RV   L  + V SV+CG 
Sbjct: 317 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGT 376

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK ++ FGDG +G LG GN
Sbjct: 377 WHSALATANGK-LFTFGDGAFGVLGHGN 403



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG +H A+VT  G ++T+G    GRLGHG  ++   P+ V  L   +++ V+CG  HT
Sbjct: 265 IVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHT 324

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLGN 498
            C+      ++++GDG    G LG G+
Sbjct: 325 -CVVSTSGDLFSWGDGIHNVGLLGHGS 350



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 9/111 (8%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP----ER 454
           +P   ++ + Y    IACG   +  +T++G+++T G   +G+LG+  + + K+P    +R
Sbjct: 471 LPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDR 529

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +V      VE ++CG +H   +  + + V+ +G G  G+LG G+T  K TP
Sbjct: 530 LVG---EFVEEIACGAHHVAVLTSRSE-VFTWGKGANGRLGHGDTEDKRTP 576



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           ++ AAI      +A   S+  L+T+G+GD  RLGHG    + +P  V +L   +   ++C
Sbjct: 429 WHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIAC 488

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLG 495
           G   TV +   G  V+  G   +G+LG
Sbjct: 489 GHTFTVALTTSGH-VFTMGGTAHGQLG 514



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 41/65 (63%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +VF WG  ++ +LG G+  + R P LV AL +++++ +S G 
Sbjct: 535 VEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGS 594

Query: 77  SHSAA 81
           + +++
Sbjct: 595 NFTSS 599



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 34/66 (51%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I  G  HV  V+  G+VF WG     +LG G Q++   P+LV  L+  NI  V+ 
Sbjct: 260 LDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVAC 319

Query: 75  GRSHSA 80
           G  H+ 
Sbjct: 320 GEYHTC 325


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 11/103 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+ TSNG LYTFG+G YG LGHG   +   P  V  L+ +    V+CG+ H
Sbjct: 239 SVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWH 298

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           T  I +           + ++ +GDG+  +LG GN  T L PT
Sbjct: 299 TAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPT 341



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  +TS+  LYT+G+G  + G LGHGT ++  +P+RVV +L  + V SV+CG 
Sbjct: 185 VACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGT 244

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK +Y FGDG YG LG G+
Sbjct: 245 WHSALATSNGK-LYTFGDGTYGVLGHGD 271



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 5/82 (6%)

Query: 399 VPLTFANRL--QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           +P    +RL  ++ E  I+CG  H+ V+TS   ++++G G  GRLGHG   + K P  + 
Sbjct: 390 IPCLVQDRLVGEFVEE-ISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIE 448

Query: 457 ALNKVHVESVSCGLNHT--VCI 476
           AL   HV+S+SCG N T  +CI
Sbjct: 449 ALKDRHVKSISCGSNFTASICI 470



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H A+VT  G ++T+G    GRLGHG   ++  P  V  L   HV+ V+CG  HT
Sbjct: 133 IACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHT 192

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
            C       +Y +GDG +  G LG G
Sbjct: 193 -CAITSSNDLYTWGDGIFNSGILGHG 217



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 7/110 (6%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT---MNWKVPERV 455
           +P   ++ + Y    +ACG   +  +T++G+++T G   YG+LG+ ++   +   V +R+
Sbjct: 339 LPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFTMGGTAYGQLGNPSSDGVIPCLVQDRL 398

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           V      VE +SCG  HTV +  + + V+++G G  G+LG G+   +  P
Sbjct: 399 VG---EFVEEISCGAYHTVVLTSRNE-VFSWGRGSNGRLGHGDVEDRKAP 444



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVVT----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  H+A +           S+  L+T+G+GD  RLGHG    + +P  V +L   + 
Sbjct: 292 VACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNF 351

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             ++CG N TV +   G  V+  G   YG+LG
Sbjct: 352 HQLACGHNMTVALTTSGH-VFTMGGTAYGQLG 382



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 42/65 (64%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  H + +++  +VF+WG  S+ +LG G+  + + P L+ AL +++++ +S G 
Sbjct: 403 VEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGS 462

Query: 77  SHSAA 81
           + +A+
Sbjct: 463 NFTAS 467



 Score = 45.1 bits (105), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 36/70 (51%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G  H+  V+  G+VF WG     +LG G   ++  P LV  L+  ++  V+ 
Sbjct: 128 LDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVAC 187

Query: 75  GRSHSAAWTA 84
           G  H+ A T+
Sbjct: 188 GEYHTCAITS 197



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 89/229 (38%), Gaps = 50/229 (21%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV----SNTG------QVFAWGNNSDAQLGLGNQINYR 56
           R +     +  + ++ G  H  A+    S TG      ++F WG+    +LG GN+  Y 
Sbjct: 279 REVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYL 338

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQ 116
            P  V +L + N  Q++ G + + A T       T GH       +G        YG L 
Sbjct: 339 LPTCVSSLIDYNFHQLACGHNMTVALT-------TSGHV----FTMG-----GTAYGQLG 382

Query: 117 NKP----LP-LIRARL--KLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSW-------L 162
           N      +P L++ RL  + +   S   Y  V L     V         +SW       L
Sbjct: 383 NPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEV---------FSWGRGSNGRL 433

Query: 163 VHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTV 211
            H  +    AP +      R V K++  G NF  S+ + +  + + Q+V
Sbjct: 434 GHGDVEDRKAPTLIEALKDRHV-KSISCGSNFTASICIHKWVSGADQSV 481


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +AI+CG  H+A+VTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 465 SAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVW 524

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 525 HTAAVVEVMVGNSSSSNCSSGK-IFTWGDGDKGRLGHGDKDTRLVP 569



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+GNG  + G LGHG  ++  VP+RV   L  +HV ++SCG 
Sbjct: 412 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGP 471

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 472 WHTAIVTSAGQ-LFTFGDGSFGVLGHGD 498



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA +L      I+CG +H+ +VT  G +Y++G    GRLGHG   +   P+ + AL 
Sbjct: 348 PLEFAVKLDVQN--ISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 405

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +G+G    G LG GN
Sbjct: 406 NMNIELVACGEYHTCAVTLSGD-LYTWGNGTSNSGLLGHGN 445



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     IACG   +  +T++G++YT G+  YG+LG+    +  +P RV   
Sbjct: 568 VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGK 626

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE +SCG  H   +  + + VY +G G  G+LG G+T  + +P
Sbjct: 627 LHKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRSSP 673



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 399 VPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P+    +L + +   I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V +
Sbjct: 619 LPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVES 678

Query: 458 LNKVHVESVSCGLNHTVCIA 477
           L    V +V CG+N T  I 
Sbjct: 679 LKDKQVRTVVCGINFTAAIC 698



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 40/70 (57%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
            + + +IS G  H   V+  G++++WG  S  +LG G   +  +P+L+ AL+N NI  V+
Sbjct: 354 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVA 413

Query: 74  AGRSHSAAWT 83
            G  H+ A T
Sbjct: 414 CGEYHTCAVT 423



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG      VP  V AL + +
Sbjct: 520 ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPN 579

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              ++CG   TV +   G  VY  G   YG+LG
Sbjct: 580 FCQIACGHCMTVALTTSGH-VYTMGSPVYGQLG 611



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 38/65 (58%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  +   P LV +L +K +R V  G 
Sbjct: 632 VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTVVCGI 691

Query: 77  SHSAA 81
           + +AA
Sbjct: 692 NFTAA 696



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQ--LGLGNQINYREPQLVLA-LS 65
           I A  N++I  ++ G  H  AV+ +G ++ WGN +     LG GN++++  P+ V   L 
Sbjct: 401 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 460

Query: 66  NKNIRQVSAGRSHSAAWTA 84
             ++  +S G  H+A  T+
Sbjct: 461 GIHVSAISCGPWHTAIVTS 479



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 459 LEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVR 518

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 519 AACGVWHTAA 528



 Score = 38.5 bits (88), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 12/89 (13%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  V  + G  H  AV             ++G++F WG+    +LG G++  
Sbjct: 506 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDT 565

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWT 83
              P  V AL   N  Q++ G   + A T
Sbjct: 566 RLVPTCVAALVEPNFCQIACGHCMTVALT 594


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V+ +G LYT+G   YG+LGHG   +  VP +V AL    +  +S G  HT
Sbjct: 227 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHT 286

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +  +GK +Y +G  ++G++G+GN     +P
Sbjct: 287 MALTSEGK-LYGWGWNKFGQVGVGNNDDHSSP 317



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 5/97 (5%)

Query: 406 RLQYYEAA----IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           ++Q +E+     IA G +H+A VT +G LY +G G YG LG G   +  +PE+V ++   
Sbjct: 163 KIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGE 222

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +  V+CG  HT+ ++D G  +Y +G  +YG+LG G+
Sbjct: 223 KMVLVACGWRHTITVSDSGN-LYTYGWSKYGQLGHGD 258



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   VT  G + ++G    G+LG GTT +  +P+++ A   V V+ ++ G  HT
Sbjct: 123 IACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHT 182

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + + G  +Y +G G YG LGLG+   +  P+
Sbjct: 183 AAVTEDGD-LYGWGWGRYGNLGLGDRNDRLLPE 214



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 52/93 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G  HS  + +   L ++G G+ G+LGHG   +  VP  +   +   + SV CG +HT
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              ++    VY++G G++G+LG GN+    TPQ
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQ 110



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 11/120 (9%)

Query: 388 RITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNG-YLYTFGNGDYGRLGHGTT 446
           R+ P V  G   P            ++ CG  H+   + +   +Y++G GD+GRLGHG +
Sbjct: 53  RLVPTVLSGFDAPAI---------TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS 103

Query: 447 MNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +   P+ V AL  + ++ ++CG +H + +   G+ V ++G  + G+LGLG T     PQ
Sbjct: 104 SDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGE-VQSWGRNQNGQLGLGTTEDSLLPQ 162



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + + I  I+ G  H LAV+  G+V +WG N + QLGLG   +   PQ + A  +  
Sbjct: 112 VKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVC 171

Query: 69  IRQVSAGRSHSAA 81
           ++ ++AG  H+AA
Sbjct: 172 VKMIAAGAEHTAA 184



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G++H+  +TS G LY +G   +G++G G   +   P +V       +  V+CG  HT
Sbjct: 279 ISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHT 338

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +++K K V+++G G  G+LG G    + TP
Sbjct: 339 LALSEK-KNVFSWGRGTSGQLGNGEIVDRNTP 369



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K+  I  IS G  H +A+++ G+++ WG N   Q+G+GN  ++  P  V    ++ 
Sbjct: 268 VEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQK 327

Query: 69  IRQVSAGRSHSAA 81
           I QV+ G  H+ A
Sbjct: 328 ISQVACGWRHTLA 340



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I AF+++ +  I+ G EH  AV+  G ++ WG      LGLG++ +   P+ V ++  
Sbjct: 162 QKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEG 221

Query: 67  KNIRQVSAGRSHS 79
           + +  V+ G  H+
Sbjct: 222 EKMVLVACGWRHT 234



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 2/100 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTG-QVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           +  F    I  +  G +H  A S    QV++WG     +LG GN  +   PQ V AL   
Sbjct: 59  LSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL 118

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
            I+Q++ G SH  A T       + G   +  L LG  +D
Sbjct: 119 KIKQIACGDSHCLAVTMAG-EVQSWGRNQNGQLGLGTTED 157



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 42/76 (55%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + +   +V ++ G  H + VS++G ++ +G +   QLG G+  ++  P  V AL +  
Sbjct: 216 VSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDST 275

Query: 69  IRQVSAGRSHSAAWTA 84
           I Q+S G  H+ A T+
Sbjct: 276 ISQISGGWRHTMALTS 291



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 5/78 (6%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN-----K 67
           ++  I  ++ G  H LA+S    VF+WG  +  QLG G  ++   P L+ ALS+     K
Sbjct: 324 EDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSDGSACK 383

Query: 68  NIRQVSAGRSHSAAWTAP 85
            +   +A    +  W +P
Sbjct: 384 KLESSTAAPFAAKVWVSP 401


>gi|392340612|ref|XP_003754128.1| PREDICTED: E3 ubiquitin-protein ligase HECTD3-like [Rattus
           norvegicus]
          Length = 861

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 517 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 576

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 577 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 632

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + GV +  F      E  F       ++  ++ GG 
Sbjct: 633 SWSKDFPAVDSVLVKLLEV-----MEGVDKETFEFKFGKELTFTTVLSDQQVVELIPGGT 687

Query: 398 SVPLTFANRLQYYE 411
            + + + +RL++ +
Sbjct: 688 GIVVGYEDRLRFIQ 701


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H+A VTS G L+TFG+G +G LGHG  ++  +P  V ALN       +CG+ H+
Sbjct: 416 ISCGPWHTAFVTSAGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIRTACGVWHS 475

Query: 474 VCI------ADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             +      A     ++ +GDG+ GKLG G+   +  P
Sbjct: 476 AAVVSVFGEASSSGKLFTWGDGDDGKLGHGDIASRLIP 513



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 6/87 (6%)

Query: 416 CGFKHSAVVTSNGYLYTFGNGDY--GRLGHGT-TMNWKVPERVVA-LNKVHVESVSCGLN 471
           CG  H+  VT++G LY +G+GD+  G LG G+   +WK P R++  +  ++V ++SCG  
Sbjct: 363 CGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWK-PVRILGQMEGINVRTISCGPW 421

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           HT  +   GK ++ FGDG +G LG G+
Sbjct: 422 HTAFVTSAGK-LFTFGDGTFGALGHGD 447



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 3/102 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P    + +     +I+CG  ++ +VT  G LY++G    GRLGHG       P+ +   
Sbjct: 294 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDEF 353

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEY--GKLGLGN 498
           +   VE   CG  HT  +   G  +YA+GDG++  G LGLG+
Sbjct: 354 DGSTVELADCGEFHTCAVTTSGD-LYAWGDGDHNAGLLGLGS 394



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG+ H AV+ S   +YT+G G  G+LGHG T   ++P  V AL    V  V CG N+T
Sbjct: 575 VACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRRMPTLVKALKGKQVRKVVCGSNYT 634

Query: 474 VCIA 477
             I 
Sbjct: 635 ATIC 638



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 8/83 (9%)

Query: 415 ACGFKHSAVV-------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           ACG  HSA V       +S+G L+T+G+GD G+LGHG   +  +P  V  L+    + V+
Sbjct: 469 ACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGHGDIASRLIPLSVTELDTTSFQQVA 528

Query: 468 CGLNHTVCIADKGKAVYAFGDGE 490
           CG + TV ++  G+ VYA G  +
Sbjct: 529 CGQSITVALSMSGQ-VYAMGTAD 550



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 38/64 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +++ G  H+  +++  +V+ WG  S+ QLG G+    R P LV AL  K +R+V  G 
Sbjct: 572 VQEVACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRRMPTLVKALKGKQVRKVVCGS 631

Query: 77  SHSA 80
           +++A
Sbjct: 632 NYTA 635



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV-------SNTGQVFAWGNNSDAQLGLGNQINYREPQ 59
           R + A      +  + G  H  AV       S++G++F WG+  D +LG G+  +   P 
Sbjct: 455 REVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGHGDIASRLIPL 514

Query: 60  LVLALSNKNIRQVSAGRSHSAA 81
            V  L   + +QV+ G+S + A
Sbjct: 515 SVTELDTTSFQQVACGQSITVA 536



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 30/64 (46%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           IS GT + + V+  GQ+++WG  S  +LG G       P+L+       +     G  H+
Sbjct: 309 ISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHT 368

Query: 80  AAWT 83
            A T
Sbjct: 369 CAVT 372


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +  +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +        +Y+FG G  G+LG+G+T  K +P
Sbjct: 307 LAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSP 338



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+V AL+   + +VSCG  HT
Sbjct: 39  VGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSR--KKPEQVGALDAQIIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ V+++G   +G++G+
Sbjct: 97  LALNDKGQ-VFSWGHAAHGQIGV 118



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 58/93 (62%), Gaps = 2/93 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G ++++G+  +G++G     ++ +VP  + +L+ + +  V+CG +
Sbjct: 88  AVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHH 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           H++ ++ K   +Y++G  +YG+LGLG+   K +
Sbjct: 148 HSLALS-KESNIYSWGQNQYGQLGLGSEKRKES 179



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           RHI +   I    I+ G  H  A++ +G +F WG N   QLGL ++ +  +P L+ +L +
Sbjct: 182 RHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRS 241

Query: 67  KNIRQVSAGRSHSAAWT 83
           + I  +  G  H+AA T
Sbjct: 242 QKIIYICCGEDHTAALT 258



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSNKNIRQVSAG 75
           IV +S G  H LA+++ GQVF+WG+ +  Q+G+    +Y R P+ + +LS+  I QV+ G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACG 145

Query: 76  RSHSAAWTAPPLPPHTPGHTPSSSLRLG---LPQDIPDHYGHLQNKPLPLIRA 125
             HS A +      ++ G      L LG     +  P H   L   P   I A
Sbjct: 146 HHHSLALSKES-NIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAA 197



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALS 65
           R+I +  +I IV ++ G  H LA+S    +++WG N   QLGLG++      P+ + +LS
Sbjct: 129 RNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLS 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                 ++AG  HS A T
Sbjct: 189 GIPFAHIAAGGGHSFALT 206



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IA G  HS  +T +G ++ +G   +G+LG     +   P  + +L    +  + CG +
Sbjct: 193 AHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGED 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +  +G  V+ FG G YG+LG  +   +  P+
Sbjct: 253 HTAALTKEG-GVFTFGAGGYGQLGHNSASHEVNPR 286



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++    +Y++G   YG+LG G+    +  P  + +L+ +    ++ G  H
Sbjct: 142 VACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFALTISG-AIFGWGRNKFGQLGLNDETDRSDP 233



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC--GL 470
           IACG +H+ A V S+G +Y+FG G  G+LG G+T N K P  V      H + V      
Sbjct: 299 IACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKGNWLTHEDYVRRLPEA 358

Query: 471 NHTVCIADKGKAVYAFGDGEYG 492
           N   C+    K +Y+ GD  + 
Sbjct: 359 NGCYCV----KRIYSGGDQSFA 376



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 37/75 (49%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + ++  I+ I  G +H  A++  G VF +G     QLG  +  +   P+ V  L    
Sbjct: 236 LKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNI 295

Query: 69  IRQVSAGRSHSAAWT 83
           + Q++ GR H+ A+ 
Sbjct: 296 VTQIACGRQHTLAFV 310


>gi|344251318|gb|EGW07422.1| putative E3 ubiquitin-protein ligase KIAA0614 [Cricetulus griseus]
          Length = 1705

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 148/337 (43%), Gaps = 35/337 (10%)

Query: 105  PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
            P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 1204 PADATDPRMACLSNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTPMYTHSIAALL 1261

Query: 164  HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
              +   +F     T+ + R +  T+     +  P +T+  L     + + +    F Q +
Sbjct: 1262 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLEIVGGEIRASENSYFCQAA 1320

Query: 220  RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
            RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 1321 RQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 1380

Query: 273  VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L P  W
Sbjct: 1381 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDLLPSFW 1436

Query: 332  KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI----IPLECFEGA--- 383
            K +V EP+    DL++ D L    ++    I+     EA   EI    +P E  EG    
Sbjct: 1437 KTLVGEPLDPDQDLQEADILTYNYVKKFESINDESELEALCAEIASQHLPTESPEGPKPC 1496

Query: 384  ------SWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
                  + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 1497 CRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 1532


>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
           aries]
          Length = 1137

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGH--GTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT+ G LYTFG  + G+LG      +N KVP+ V  +++  ++ V+CG  
Sbjct: 221 ISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQ-VACGGG 279

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  KAVY FG G++G+LGLG
Sbjct: 280 HTVVLTE--KAVYTFGLGQFGQLGLG 303



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT T     P+ + ++    +  V CG NH
Sbjct: 274 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENH 332

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I + G  +Y FGDG +GKLGLG
Sbjct: 333 TALITESG-LLYTFGDGRHGKLGLG 356



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 1/87 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +++CG +H+A+ T N  L+ FG+ ++G+LG G+      P  + AL    V+ V+CG NH
Sbjct: 65  SLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNH 124

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ +   GK VYA G    G+LGLG+T
Sbjct: 125 TLVLTGGGK-VYATGGNNEGQLGLGDT 150



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           + CG  H+A++T +G LYTFG+G +G+LG G     N  +P       K  V  V+CG  
Sbjct: 326 VCCGENHTALITESGLLYTFGDGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACGGC 385

Query: 472 HTVCIA 477
           H +  A
Sbjct: 386 HMLVFA 391



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FK    + +S G EH    +   ++F +G+N+  QLGLG++    +P  + 
Sbjct: 49  AENIPSKFWFKKDIPISLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIK 108

Query: 63  ALSNKNIRQVSAGRSHSAAWTA 84
           AL  + ++ V+ GR+H+   T 
Sbjct: 109 ALKPEKVKFVACGRNHTLVLTG 130



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           I A K   +  ++ G  H L ++  G+V+A G N++ QLGLG+        L+    S  
Sbjct: 107 IKALKPEKVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQH 166

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 167 KIKQLSAGSNTSAALT 182



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   P  V     K
Sbjct: 159 ISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNMCVPHQVTV--GK 216

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLP 105
            I  +S G  HSA  T      +T G   S   +LGLP
Sbjct: 217 PISWISCGYYHSAFVTTEG-ELYTFGEPESG--KLGLP 251


>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 918

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +H+AVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           +   + GK VYA G    G+LGLG+T  + T
Sbjct: 100 LVSTEGGK-VYAAGGNNEGQLGLGDTEERST 129



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT +    VP+ +  +    +  ++CG NH
Sbjct: 248 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDMG-LMYTFGDGRHGKLGLG 330



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT+ G LYTFG  + G+LG  +   +N ++P+ V  +    V+ V+CG  
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  KAVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--KAVYTFGLGQFGQLGLG 277



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
           IACG  H+A++T  G +YTFG+G +G+LG G   + N  +P       +  V+ VSCG  
Sbjct: 300 IACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGC 359

Query: 472 HTVCIA 477
           HT+  A
Sbjct: 360 HTLVFA 365



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     +    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +  +G+ +Y FG+ E GKLGL N
Sbjct: 203 AFVTTEGQ-LYTFGEPECGKLGLPN 226



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G+V+A G N++ QLGLG+        L+    S +
Sbjct: 81  VKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR 140

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K I  +S G 
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGY 199

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 200 YHSAFVT 206



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+   F+N     +S G EH   V+   +++ +G+N+  QLGLG++    +P  V A
Sbjct: 24  ENIPSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKA 83

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L  + ++  + GR+H+   T
Sbjct: 84  LKPEKVKFAACGRNHTLVST 103


>gi|237840751|ref|XP_002369673.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211967337|gb|EEB02533.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221503319|gb|EEE29017.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii VEG]
          Length = 1015

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVV----TSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
            P    +   Y+ A +ACG  HSA +         L+T G G  GRLGHG   +  +P  
Sbjct: 252 TPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTA 311

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           V AL  V++ +++CG +HT C+   G  +Y +G   +GKLGLG+T
Sbjct: 312 VHALENVNITAIACGAHHTACVTSAGT-LYTWGGAAFGKLGLGST 355



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G    AVV  +G LY +G    G+LG G   +  VP  V AL+   V++V+C   HT
Sbjct: 138 VSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALHGKVVKAVACSQEHT 197

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           VC  D G A YA+G    G+LGL
Sbjct: 198 VCCLDDGSA-YAWGCALNGRLGL 219



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 45/73 (61%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + A KNI+   +S G   +  V+++G+++ WG NS+ QLG G++ +   P+LV AL  
Sbjct: 125 RLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALHG 184

Query: 67  KNIRQVSAGRSHS 79
           K ++ V+  + H+
Sbjct: 185 KVVKAVACSQEHT 197



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)

Query: 7   RHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           RH+P    A +N++I  I+ G  H   V++ G ++ WG  +  +LGLG   + R  QL+ 
Sbjct: 306 RHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLG---STRGSQLLP 362

Query: 63  A-----LSNKNIRQVSAGRSHSAAWT 83
                 L NK +  V+ G  HSA  T
Sbjct: 363 KHVSGPLRNKAVVSVALGSQHSACVT 388


>gi|221482889|gb|EEE21220.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii GT1]
          Length = 1020

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVV----TSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
            P    +   Y+ A +ACG  HSA +         L+T G G  GRLGHG   +  +P  
Sbjct: 252 TPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTA 311

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           V AL  V++ +++CG +HT C+   G  +Y +G   +GKLGLG+T
Sbjct: 312 VHALENVNITAIACGAHHTACVTSAGT-LYTWGGAAFGKLGLGST 355



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G    AVV  +G LY +G    G+LG G   +  VP  V AL+   V++V+C   HT
Sbjct: 138 VSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALHGKVVKAVACSQEHT 197

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           VC  D G A YA+G    G+LGL
Sbjct: 198 VCCLDDGSA-YAWGCALNGRLGL 219



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 45/73 (61%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + A KNI+   +S G   +  V+++G+++ WG NS+ QLG G++ +   P+LV AL  
Sbjct: 125 RLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALHG 184

Query: 67  KNIRQVSAGRSHS 79
           K ++ V+  + H+
Sbjct: 185 KVVKAVACSQEHT 197



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)

Query: 7   RHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           RH+P    A +N++I  I+ G  H   V++ G ++ WG  +  +LGLG   + R  QL+ 
Sbjct: 306 RHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLG---STRGSQLLP 362

Query: 63  A-----LSNKNIRQVSAGRSHSAAWT 83
                 L NK +  V+ G  HSA  T
Sbjct: 363 KHVSGPLRNKAVVSVALGSQHSACVT 388


>gi|259490348|ref|NP_001159191.1| uncharacterized protein LOC100304276 [Zea mays]
 gi|223942555|gb|ACN25361.1| unknown [Zea mays]
 gi|414871691|tpg|DAA50248.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 480

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 4/90 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM---NWKVPERVVALNKVHVESVSCGL 470
           ++CG  H+A ++ NG +YT+G G  G+LGH +     N  +P RVVAL+ + V  VSCG 
Sbjct: 231 VSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRVVALDGIVVGDVSCGG 290

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
            H+ C   +G A+YA+G G  G+LG+G  G
Sbjct: 291 VHS-CAVTEGGALYAWGGGHVGQLGVGPQG 319



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 45/65 (69%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A V S+G L+T+G  ++G+LG GT  + K P++V +L    V+SVSCG + T
Sbjct: 65  IACGREHTAAVASDGSLFTWGANEFGQLGDGTEDSAKEPKKVKSLETEFVKSVSCGAHCT 124

Query: 474 VCIAD 478
             +A+
Sbjct: 125 AAVAE 129



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           K++   DI+ G EH  AV++ G +F WG N   QLG G + + +EP+ V +L  + ++ V
Sbjct: 58  KSLRWTDIACGREHTAAVASDGSLFTWGANEFGQLGDGTEDSAKEPKKVKSLETEFVKSV 117

Query: 73  SAGRSHSAAWTAPP 86
           S G +H  A  A P
Sbjct: 118 SCG-AHCTAAVAEP 130



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV---------ALNKVHVE 464
           ++CG  H   ++ +G L  +G  +YG+LG G T       RV+         A  +V + 
Sbjct: 170 VSCGAVHVMALSEDGLLQAWGYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQVKIV 229

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            VSCG  HT  I++ G+ VY +G G  G+LG
Sbjct: 230 RVSCGEYHTAAISENGE-VYTWGLGSMGQLG 259



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG---LGNQINYREPQLVLALSNKNI 69
           + + IV +S G  H  A+S  G+V+ WG  S  QLG   L +  N   P+ V+AL    +
Sbjct: 224 EQVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRVVALDGIVV 283

Query: 70  RQVSAGRSHSAAWT 83
             VS G  HS A T
Sbjct: 284 GDVSCGGVHSCAVT 297


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 1/86 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG++H+  V+S+G LYT+G   YG+LGHG   +  VP ++ AL    +  +S G  HT
Sbjct: 238 IACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHT 297

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + +   GK +Y +G  ++G++G+G+T
Sbjct: 298 MALTSDGK-LYGWGWNKFGQVGVGDT 322



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 5/156 (3%)

Query: 347 NDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANR 406
           +D    Q ++A++ I +  +   +   +      E  SW       +  G +       +
Sbjct: 115 SDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQK 174

Query: 407 LQYYEAA----IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           +Q +E      IA G +H+A VT +G LY +G G YG LG G   +  VPE+V ++    
Sbjct: 175 IQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEK 234

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           +  ++CG  HT+ ++  G ++Y +G  +YG+LG G+
Sbjct: 235 MVLIACGWRHTITVSSSG-SLYTYGWSKYGQLGHGD 269



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   VT  G + ++G    G+LG GTT +  +P+++ +   V V+ ++ G  HT
Sbjct: 134 IACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHT 193

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + + G  +Y +G G YG LGLG+   +  P+
Sbjct: 194 AAVTEDGD-LYGWGWGRYGNLGLGDRNDRLVPE 225



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 2/95 (2%)

Query: 413 AIACGFKHSAVVTSN-GYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++ CG  H+   + +   +Y++G GD+GRLGHG + +   P+ V AL  + ++ ++CG +
Sbjct: 80  SVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDS 139

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           H + +   G+ V ++G  + G+LGLG T     PQ
Sbjct: 140 HCLAVTMAGE-VQSWGRNQNGQLGLGTTEDSLLPQ 173



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 2/95 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH--VESVSCGLN 471
           ++ G  HS  + +   L ++G G+ G+LGHG   +  VP  +   +     + SV CG +
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT   ++  + VY++G G++G+LG GN+    TPQ
Sbjct: 87  HTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQ 121



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I I  I+ G  H LAV+  G+V +WG N + QLGLG   +   PQ + +     
Sbjct: 123 VKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVC 182

Query: 69  IRQVSAGRSHSAA 81
           ++ ++AG  H+AA
Sbjct: 183 VKMIAAGAEHTAA 195



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G++H+  +TS+G LY +G   +G++G G T +   P +V       V  V+CG  HT
Sbjct: 290 ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHT 349

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           +   +K K V+++G G  G+LG G 
Sbjct: 350 LAFTEK-KNVFSWGRGTSGQLGHGE 373



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 43/75 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K+  I  IS G  H +A+++ G+++ WG N   Q+G+G+  ++  P  V    ++ 
Sbjct: 279 LEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQK 338

Query: 69  IRQVSAGRSHSAAWT 83
           + QV+ G  H+ A+T
Sbjct: 339 VAQVACGWRHTLAFT 353



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 2/92 (2%)

Query: 17  IVDISVGTEHVLAVS-NTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           I  +  G +H  A S +  QV++WG     +LG GN  +   PQ V AL    I+Q++ G
Sbjct: 78  ITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACG 137

Query: 76  RSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
            SH  A T       + G   +  L LG  +D
Sbjct: 138 DSHCLAVTMAG-EVQSWGRNQNGQLGLGTTED 168



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 19/73 (26%), Positives = 39/73 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I +F+ + +  I+ G EH  AV+  G ++ WG      LGLG++ +   P+ V ++  
Sbjct: 173 QKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEG 232

Query: 67  KNIRQVSAGRSHS 79
           + +  ++ G  H+
Sbjct: 233 EKMVLIACGWRHT 245



 Score = 42.4 bits (98), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 43/76 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + +   +V I+ G  H + VS++G ++ +G +   QLG G+  ++  P  + AL + +
Sbjct: 227 VSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSS 286

Query: 69  IRQVSAGRSHSAAWTA 84
           I Q+S G  H+ A T+
Sbjct: 287 ISQISGGWRHTMALTS 302



 Score = 38.9 bits (89), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 29/53 (54%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           ++  +  ++ G  H LA +    VF+WG  +  QLG G  ++  +P ++ ALS
Sbjct: 335 EDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALS 387



 Score = 38.5 bits (88), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 8/122 (6%)

Query: 343 DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLEC---FEGASWT--GRITPIVTGGQ 397
           D ED+  L    L A++D  +S ++   +   + L       G  W   G++    T   
Sbjct: 269 DFEDH--LVPHKLEALKDSSISQIS-GGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDH 325

Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
             P+          A +ACG++H+   T    ++++G G  G+LGHG  ++   P  + A
Sbjct: 326 CFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDA 385

Query: 458 LN 459
           L+
Sbjct: 386 LS 387


>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
 gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Rattus norvegicus]
 gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Rattus norvegicus]
          Length = 551

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ     +IACG   S  V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ +YA+G   YG+LG GN  
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-IYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V S++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMSIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 216 CSMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 248



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            VV      +E  +C   HT     +G  VY +G
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQ++AWG NS  QLG GN+ N   
Sbjct: 240 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY 299

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 300 PTPVVVEKDRIIEIAACHSAHTSA 323



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T++G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQPIPR 196



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  ++ I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK + 
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVM 208

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 209 SIACGQMCSMA 219



 Score = 41.6 bits (96), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169


>gi|323450026|gb|EGB05910.1| hypothetical protein AURANDRAFT_66097 [Aureococcus anophagefferens]
          Length = 1340

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           H+  +T++G +Y+FG+G  G+LGHG   +   P RV AL    V +VSCG  H++ + D+
Sbjct: 140 HTLALTASGEVYSFGHGGCGQLGHGDQESSATPRRVDALAGAFVVAVSCGQQHSLALTDR 199

Query: 480 GKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           G A YAFG G  GK GLG+   +  P+
Sbjct: 200 G-APYAFGSGFGGKTGLGDQRSRSLPR 225



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 2/97 (2%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           +  A++CG +HS  +T  G  Y FG+G  G+ G G   +  +P RV  + +  V  ++ G
Sbjct: 182 FVVAVSCGQQHSLALTDRGAPYAFGSGFGGKTGLGDQRSRSLPRRVAGIPE-PVAVLTAG 240

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +H++     G AVYAFG   + +LGL   G    P+
Sbjct: 241 AHHSLAATTSG-AVYAFGSNVHLQLGLPERGDAYAPR 276



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +PA   +  + ++  + H LA++ +G+V+++G+    QLG G+Q +   P+ V AL+   
Sbjct: 124 VPA-GGLRFISVATHSFHTLALTASGEVYSFGHGGCGQLGHGDQESSATPRRVDALAGAF 182

Query: 69  IRQVSAGRSHSAAWT 83
           +  VS G+ HS A T
Sbjct: 183 VVAVSCGQQHSLALT 197



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +  ++ G  H LA + +G V+A+G+N   QLGL  + +   P+ V AL  + + Q+S G 
Sbjct: 234 VAVLTAGAHHSLAATTSGAVYAFGSNVHLQLGLPERGDAYAPRRVDALDGRVV-QLSGGE 292

Query: 77  SHSAA 81
            HS A
Sbjct: 293 HHSLA 297



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  + R + A     +V +S G +H LA+++ G  +A+G+    + GLG+Q +   P+ V
Sbjct: 168 SSATPRRVDALAGAFVVAVSCGQQHSLALTDRGAPYAFGSGFGGKTGLGDQRSRSLPRRV 227

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             +  + +  ++AG  HS A T
Sbjct: 228 AGIP-EPVAVLTAGAHHSLAAT 248



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +  G  HS   T++G +Y FG+  + +LG     +   P RV AL+   V  +S G +
Sbjct: 235 AVLTAGAHHSLAATTSGAVYAFGSNVHLQLGLPERGDAYAPRRVDALDG-RVVQLSGGEH 293

Query: 472 HTVCIADKGKAVYAFGDGE 490
           H++ + D   A Y++G GE
Sbjct: 294 HSLAV-DAAGACYSWGAGE 311


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  HS  VT +G LYT+G+G  ++G LGHG  ++   P+RV   L  V V SV+CG 
Sbjct: 180 VACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGP 239

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HTV +   G+ +++FGDG +G LG G+      P+
Sbjct: 240 WHTVLVTSTGQ-LFSFGDGTFGVLGHGDRKSASMPR 274



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ + +L    V+ V+CG  H+
Sbjct: 128 IACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHS 187

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLGNTGLKPTPQ 506
             +   G  +Y +GDG   +G LG GN     TP+
Sbjct: 188 CAVTQSGD-LYTWGDGTHNFGLLGHGNNISHWTPK 221



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +++ACG  H+ +VTS G L++FG+G +G LGHG   +  +P  V +L  +     +CG  
Sbjct: 233 SSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPW 292

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+  +LG G+   K  P
Sbjct: 293 HTAAVVEVMSRYSNAGSSLSGK-LFTWGDGDKNRLGHGDKEQKLVP 337



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           VP   A  + +    +ACG   +  +T+ G+LYT G+  YG+LG       ++P  V+ L
Sbjct: 336 VPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATG-RLPG-VLRL 393

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +  +E VSCG  H   +  KG  V  +G G  G+LG G+   +  P
Sbjct: 394 GRTLIEEVSCGAYHVAALTSKGD-VCTWGKGANGRLGHGDAEDRDVP 439



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG  H A +TS G + T+G G  GRLGHG   +  VP  V AL    V+ VSCG + T
Sbjct: 401 VSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFT 460

Query: 474 --VCIADKGKAV 483
             +C+   G  V
Sbjct: 461 SAICLHKSGPGV 472



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 40/65 (61%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I ++S G  HV A+++ G V  WG  ++ +LG G+  +   P LV AL +K +++VS G 
Sbjct: 398 IEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGS 457

Query: 77  SHSAA 81
           S ++A
Sbjct: 458 SFTSA 462



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R + +   + +  I+ G  H   V+  G+VF+WG  S  +LG G   +   PQL+ +L++
Sbjct: 115 RAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLAS 174

Query: 67  KNIRQVSAGRSHSAAWT 83
             ++ V+ G  HS A T
Sbjct: 175 STVQYVACGEYHSCAVT 191



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD  RLGHG      VP  V AL   +
Sbjct: 288 ACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHN 347

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G  +Y  G   YG+LG
Sbjct: 348 FRQVACGHSLTVALTTTGH-LYTMGSVSYGQLG 379



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 25/156 (16%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  +  + G  H  AV            S +G++F WG+    +LG G++  
Sbjct: 274 REVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQ 333

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPS-SSLRLGLPQDIPDHYG 113
              P  V AL + N RQV+ G S + A T       T GH  +  S+  G   D P   G
Sbjct: 334 KLVPTCVAALVDHNFRQVACGHSLTVALT-------TTGHLYTMGSVSYGQLGD-PQATG 385

Query: 114 HLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNV 149
            L      ++R    L+   S   Y V  L   G+V
Sbjct: 386 RLPG----VLRLGRTLIEEVSCGAYHVAALTSKGDV 417


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +  +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +        +Y+FG G  G+LG+G+T  K +P
Sbjct: 307 LAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSP 338



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+V AL+   + +VSCG  HT
Sbjct: 39  VGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSR--KKPEQVGALDAQIIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ V+++G   +G++G+
Sbjct: 97  LALNDKGQ-VFSWGHAAHGQIGV 118



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 58/93 (62%), Gaps = 2/93 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G ++++G+  +G++G     ++ +VP  + +L+ + +  V+CG +
Sbjct: 88  AVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHH 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           H++ ++ K   +Y++G  +YG+LGLG+   K +
Sbjct: 148 HSLALS-KESNIYSWGQNQYGQLGLGSEKRKES 179



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           RHI +   I    I+ G  H  A++ +G +F WG N   QLGL ++ +  +P L+ +L +
Sbjct: 182 RHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRS 241

Query: 67  KNIRQVSAGRSHSAAWT 83
           + I  +  G  H+AA T
Sbjct: 242 QKIIYICCGEDHTAALT 258



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSNKNIRQVSAG 75
           IV +S G  H LA+++ GQVF+WG+ +  Q+G+    +Y R P+ + +LS+  I QV+ G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACG 145

Query: 76  RSHSAAWTAPPLPPHTPGHTPSSSLRLG---LPQDIPDHYGHLQNKPLPLIRA 125
             HS A +      ++ G      L LG     +  P H   L   P   I A
Sbjct: 146 HHHSLALSKES-NIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAA 197



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALS 65
           R+I +  +I IV ++ G  H LA+S    +++WG N   QLGLG++      P+ + +LS
Sbjct: 129 RNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLS 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                 ++AG  HS A T
Sbjct: 189 GIPFAHIAAGGGHSFALT 206



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IA G  HS  +T +G ++ +G   +G+LG     +   P  + +L    +  + CG +
Sbjct: 193 AHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGED 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +  +G  V+ FG G YG+LG  +   +  P+
Sbjct: 253 HTAALTKEG-GVFTFGAGGYGQLGHNSASHEVNPR 286



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++    +Y++G   YG+LG G+    +  P  + +L+ +    ++ G  H
Sbjct: 142 VACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFALTISG-AIFGWGRNKFGQLGLNDETDRSDP 233



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC--GL 470
           IACG +H+ A V S+G +Y+FG G  G+LG G+T N K P  V      H + V      
Sbjct: 299 IACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKGNWLTHEDYVRRLPEA 358

Query: 471 NHTVCIADKGKAVYAFGDGEYG 492
           N   C+    K +Y+ GD  + 
Sbjct: 359 NGCYCV----KRIYSGGDQSFA 376



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 37/74 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + ++  I+ I  G +H  A++  G VF +G     QLG  +  +   P+ V  L    
Sbjct: 236 LKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNI 295

Query: 69  IRQVSAGRSHSAAW 82
           + Q++ GR H+ A+
Sbjct: 296 VTQIACGRQHTLAF 309


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 231 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHT 290

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +        +Y+FG G  G+LG G+T  + +P
Sbjct: 291 LAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 322



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K P++V AL+   + +VSCG  HT
Sbjct: 23  VGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSR--KKPDQVGALDAQTIVAVSCGEAHT 80

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ V+++G   +G++GL
Sbjct: 81  LALNDKGQ-VFSWGHAAHGQIGL 102



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G ++++G+  +G++G     ++ +VP  + +L  + +  V+CG +
Sbjct: 72  AVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHH 131

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           H++ ++ K   +Y++G  +YG+LGLG+
Sbjct: 132 HSLALS-KESDIYSWGQNQYGQLGLGS 157



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           RHI +   I    I+ G  H  A++ +G +F WG N   QLGL ++ +   P L+ +L +
Sbjct: 166 RHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRS 225

Query: 67  KNIRQVSAGRSHSAAWT 83
           + I  +  G  H+AA T
Sbjct: 226 QKIIHICCGEDHTAALT 242



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IA G  HS  +T +G ++ +G   +G+LG     +   P  + +L    +  + CG +
Sbjct: 177 AHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGED 236

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 237 HTAALTKEG-GVFTFGAGGYGQLGHNSTNHEVNPR 270



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALS 65
           R+I +  +I IV ++ G  H LA+S    +++WG N   QLGLG++I     P+ + +L+
Sbjct: 113 RNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLA 172

Query: 66  NKNIRQVSAGRSHSAAWT 83
                 ++AG  HS A T
Sbjct: 173 GIPFAHIAAGGGHSFALT 190



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSNKNIRQVSAG 75
           IV +S G  H LA+++ GQVF+WG+ +  Q+GL    +Y R P+ + +L +  I QV+ G
Sbjct: 70  IVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACG 129

Query: 76  RSHSAAWTAPPLPPHTPGHTPSSSLRLG---LPQDIPDHYGHLQNKPLPLIRA 125
             HS A +      ++ G      L LG     +  P H   L   P   I A
Sbjct: 130 HHHSLALSKES-DIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAA 181



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++    +Y++G   YG+LG G+ +  +  P  + +L  +    ++ G  H
Sbjct: 126 VACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGH 185

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 186 SFALTMSG-AIFGWGRNKFGQLGLNDETDRSAP 217



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 37/75 (49%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + ++  I+ I  G +H  A++  G VF +G     QLG  +  +   P+ V  L    
Sbjct: 220 LKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI 279

Query: 69  IRQVSAGRSHSAAWT 83
           + Q++ GR H+ A+ 
Sbjct: 280 VTQIACGRQHTLAFV 294


>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
          Length = 1020

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRHGKLGLG 330



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 19/93 (20%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--------HGT-TMNWKVPERVVALNKVHVE 464
           I+CG+ HSA VT++G LY FG  + G+LG        H T  +  ++PE+V+        
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-------- 246

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            V+CG  HTV + +   AVY FG G++G+LGLG
Sbjct: 247 QVACGGEHTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     V    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
             +   G+ +Y FG+ E GKLGL N   G   TPQ
Sbjct: 203 AFVTTDGE-LYVFGEPENGKLGLPNQLLGNHRTPQ 236



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVVFA 365



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWT 83
            +  +S G  HSA  T
Sbjct: 191 PVSWISCGYYHSAFVT 206



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ+  N+R PQLV  +  K I QV+ G  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGE 253

Query: 78  HSAAWT 83
           H+   T
Sbjct: 254 HTVVLT 259



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL--SN 66
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+    R    V++   S 
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGD-TEERNTFHVISFFTSE 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAALT 156


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 248 LACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHT 307

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT 499
           +  ++D GK V++FG G+ G+LG G T
Sbjct: 308 LAYVSDLGK-VFSFGSGKDGQLGNGGT 333



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  ++G+LG G T +   P  + AL+   VE ++CG +
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGS 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  +   G  ++ FG G++G+LG  +T
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNST 280



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 47/86 (54%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S T+ + +     + +  IS G  H +A+S +G +++WG N   QLGLG+  +   P L+
Sbjct: 178 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLI 237

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPL 87
            AL N+ +  ++ G SHSA  T   L
Sbjct: 238 EALDNQEVEFLACGGSHSALLTQDGL 263



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G +  +   PQ+V  L+   + Q+SAG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199

Query: 76  RSHSAA 81
            +HS A
Sbjct: 200 EAHSMA 205



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L  V +  +S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  +Y++G  E+G+LGLG+T  K  P
Sbjct: 203 SMALSMSGN-IYSWGKNEFGQLGLGHTESKDYP 234



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 35/76 (46%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  N  +  ++ G  H   ++  G +F +G     QLG  +  N   P LV  L    
Sbjct: 237 IEALDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNR 296

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 297 VTQIACGRWHTLAYVS 312


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 11/103 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A+ACG  HSA+ TSNG L+TFG+G +G LGHG   +   P+ V  L+      V+CG+ H
Sbjct: 372 AVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVACGVWH 431

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           +  I D           K ++ +GDG+  +LG  N  T L+PT
Sbjct: 432 SAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPT 474



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGR--LGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  HS  V+++G L+T+G+G +G   LGHGT +++ +P+RV   L  + V +V+CG 
Sbjct: 318 VACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVACGT 377

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H+      GK ++ FGDG +G LG GN      P+
Sbjct: 378 WHSALATSNGK-LFTFGDGRFGVLGHGNRASVAYPK 412



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 3/81 (3%)

Query: 399 VPLTFANRL--QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           VP+   ++L  ++ E  I+CG  H AV+TS   LYT+G G  GRLGHG T + K P  V 
Sbjct: 523 VPILVRDKLVGEFVEE-ISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLVE 581

Query: 457 ALNKVHVESVSCGLNHTVCIA 477
           AL   HV+++SCG   T CI 
Sbjct: 582 ALKDRHVKNISCGSTFTSCIC 602



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 7/109 (6%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           P   A   +Y    +ACG+  +  +T++G++++ G   YG+LG+  + + KVP  ++  +
Sbjct: 473 PTCVAAVAEYNFHQVACGYTMTVALTASGHVFSMGGTTYGQLGNPNS-DGKVP--ILVRD 529

Query: 460 KV---HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           K+    VE +SCG NH   +  + + +Y +G G  G+LG G+T  K +P
Sbjct: 530 KLVGEFVEEISCGANHVAVLTSRSE-LYTWGRGANGRLGHGDTDDKKSP 577



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 11/104 (10%)

Query: 409 YYEAAIACGFKHSAVV----------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           Y    +ACG  HSA +           S   L+T+G+GD  RLGH     +  P  V A+
Sbjct: 420 YKAIKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAV 479

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
            + +   V+CG   TV +   G  V++ G   YG+LG  N+  K
Sbjct: 480 AEYNFHQVACGYTMTVALTASGH-VFSMGGTTYGQLGNPNSDGK 522



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I  G +H A+VT  G ++T+G    GRLGHG   ++  P  V +L   +V  V+CG  H+
Sbjct: 266 IGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHS 325

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             ++  G  ++ +GDG +G   LG+
Sbjct: 326 CAVSTSGD-LFTWGDGTHGAGLLGH 349



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I  G  H+  V+  G+VF WG +S  +LG G + ++  P LV +L+  N+  V+ 
Sbjct: 261 LDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVAC 320

Query: 75  GRSHSAA 81
           G  HS A
Sbjct: 321 GEYHSCA 327



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 17/65 (26%), Positives = 40/65 (61%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +++ WG  ++ +LG G+  + + P LV AL +++++ +S G 
Sbjct: 536 VEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLVEALKDRHVKNISCGS 595

Query: 77  SHSAA 81
           + ++ 
Sbjct: 596 TFTSC 600



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 28/50 (56%)

Query: 35  QVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
           ++F WG+    +LG  N+  Y EP  V A++  N  QV+ G + + A TA
Sbjct: 450 RLFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQVACGYTMTVALTA 499


>gi|260841550|ref|XP_002613975.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
 gi|229299365|gb|EEN69984.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
          Length = 484

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           HS ++T +G   ++G  D G+LGHG T    VP  + +L   ++   +CG NHT+C+ D 
Sbjct: 124 HSILITEDGKAMSWGRNDKGQLGHGDTKRVDVPTVIESLAGFNIVEAACGRNHTLCLTDD 183

Query: 480 GKAVYAFGDGEYGKLGLGN 498
           GK V+AFG+ + G+LGLGN
Sbjct: 184 GK-VFAFGENKMGQLGLGN 201



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 25/106 (23%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW------------KVPERVVA---- 457
           +ACG + S V+   G LY+FG  +YG+LG+ T   +             VP R+      
Sbjct: 222 VACGAEFSMVIDCRGALYSFGCPEYGQLGNNTDGQYFVTSNKMAYDCELVPRRISVFIEK 281

Query: 458 --------LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
                   +  V +  + CG NHTV + DK K V+ +G G YG+LG
Sbjct: 282 TKDGFINPITNVQLVDIKCGTNHTVAL-DKQKRVFTWGFGGYGRLG 326



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VA 457
           VP    +   +     ACG  H+  +T +G ++ FG    G+LG G   N  VP    + 
Sbjct: 155 VPTVIESLAGFNIVEAACGRNHTLCLTDDGKVFAFGENKMGQLGLGNE-NAAVPSPTQIV 213

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
                V  V+CG   ++ I  +G A+Y+FG  EYG+LG    G
Sbjct: 214 YTGPPVVKVACGAEFSMVIDCRG-ALYSFGCPEYGQLGNNTDG 255



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ 52
           I +    +IV+ + G  H L +++ G+VFA+G N   QLGLGN+
Sbjct: 159 IESLAGFNIVEAACGRNHTLCLTDDGKVFAFGENKMGQLGLGNE 202



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS--NKNIRQ 71
           N+ +VDI  GT H +A+    +VF WG     +LG   Q +   P+LV       +  R 
Sbjct: 292 NVQLVDIKCGTNHTVALDKQKRVFTWGFGGYGRLGHSEQKDEHVPRLVKMFDYPGRGART 351

Query: 72  VSAGRSHS 79
           + AG  +S
Sbjct: 352 IYAGAFYS 359



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
           H + ++  G+  +WG N   QLG G+      P ++ +L+  NI + + GR+H+   T
Sbjct: 124 HSILITEDGKAMSWGRNDKGQLGHGDTKRVDVPTVIESLAGFNIVEAACGRNHTLCLT 181



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN--KVHVESVSCGLN 471
           I CG  H+  +     ++T+G G YGRLGH    +  VP  V   +       ++  G  
Sbjct: 298 IKCGTNHTVALDKQKRVFTWGFGGYGRLGHSEQKDEHVPRLVKMFDYPGRGARTIYAGAF 357

Query: 472 HTVCIADKGKAVYAFG 487
           +++ I D G  +Y +G
Sbjct: 358 YSMGIMDNGGQLYLWG 373


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 9/101 (8%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H+A+++S G L+ +G+G +G LGHG T+    P++V +L  V  ++++CG  HT
Sbjct: 317 IACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHT 376

Query: 474 VCIADKGKAV---------YAFGDGEYGKLGLGNTGLKPTP 505
             I ++   V         + +GD + GKLG  +  +K  P
Sbjct: 377 AAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVP 417



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 54/84 (64%), Gaps = 2/84 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG KH+A+VT  G ++++G  + GRLGH  +++   P+ + +L    V++++ G  H
Sbjct: 209 SVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKH 268

Query: 473 TVCIADKGKAVYAFGDGEYGKLGL 496
           T  ++  G+ +Y +G+G +  LGL
Sbjct: 269 TCAVSISGE-LYEWGEGTHC-LGL 290



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 38/64 (59%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            K   + +IS G+ H+  ++  G+VF WG  ++ QLGLG+ ++   P LV AL +K +  
Sbjct: 475 LKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHS 534

Query: 72  VSAG 75
           ++ G
Sbjct: 535 IACG 538



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 413 AIACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           AIACG  H+A +            +G L+T+G+ D G+LGH       VP  V  LN   
Sbjct: 368 AIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFD 427

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              VSC    T+ +   G  V+  G  E+G+LG
Sbjct: 428 FAQVSCAKAQTIVLTITG-VVFTIGSKEHGRLG 459



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDY--GRLGHG 444
           GR+   V+   S P    +       AIA G KH+  V+ +G LY +G G +  G  G  
Sbjct: 235 GRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQ 294

Query: 445 TTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
              +   P ++   L+ + +  ++CG  HT  I+  G+ ++A+GDG +G LG G+T
Sbjct: 295 YQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQ-LFAYGDGTFGVLGHGDT 349



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+   GR+   ++   S+ L        +   I+ G  H AV+T NG ++T+G G  G+L
Sbjct: 451 GSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQL 510

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           G G  ++   P  V AL    V S++CG N T+ I 
Sbjct: 511 GLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAIC 546



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 16  HIVDI---SVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           HI+D+   + G +H   V+  G+VF+WG ++  +LG    ++  +P+++ +L++  ++ +
Sbjct: 203 HIIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAI 262

Query: 73  SAGRSHSAA 81
           + G  H+ A
Sbjct: 263 AFGAKHTCA 271



 Score = 45.1 bits (105), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++C    + V+T  G ++T G+ ++GRLG+  + +  +      L    V  +S G +
Sbjct: 429 AQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSS 488

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           H   +   GK V+ +G G  G+LGLG+
Sbjct: 489 HIAVLTMNGK-VFTWGKGTEGQLGLGD 514



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I I+ I+ G  H   +S+ GQ+FA+G+ +   LG G+ +    P+ V +L     + ++ 
Sbjct: 312 ISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIAC 371

Query: 75  GRSHSAA 81
           G  H+AA
Sbjct: 372 GPWHTAA 378


>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Papio anubis]
          Length = 1023

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 247 LACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHT 306

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT 499
           +  ++D GK V++FG G+ G+LG G T
Sbjct: 307 LAYVSDLGK-VFSFGSGKDGQLGNGGT 332



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  ++G+LG G T +   P  + AL+   VE ++CG +
Sbjct: 193 AQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGS 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  +   G  ++ FG G++G+LG  +T
Sbjct: 253 HSALLTQDG-LLFTFGAGKHGQLGHNST 279



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 47/86 (54%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S T+ + +     + +  IS G  H +A+S +G V++WG N   QLGLG+  +   P L+
Sbjct: 177 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLI 236

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPL 87
            AL N+ +  ++ G SHSA  T   L
Sbjct: 237 EALDNQKVEFLACGGSHSALLTQDGL 262



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G +  +   PQ+V  L+   + Q+SAG
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 198

Query: 76  RSHSAA 81
            +HS A
Sbjct: 199 EAHSMA 204



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L  V +  +S G  H
Sbjct: 142 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  VY++G  E+G+LGLG+T  K +P
Sbjct: 202 SMALSMSGN-VYSWGKNEFGQLGLGHTESKDSP 233



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 35/76 (46%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  N  +  ++ G  H   ++  G +F +G     QLG  +  N   P LV  L    
Sbjct: 236 IEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNR 295

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 296 VTQIACGRWHTLAYVS 311


>gi|432911368|ref|XP_004078645.1| PREDICTED: E3 ubiquitin-protein ligase HECTD3-like [Oryzias
           latipes]
          Length = 856

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 50/287 (17%)

Query: 163 VHPSLRPLFAPRVYTLPLVRSVGKTMLVGK------------------NFGPSVTV-RRL 203
           V P L P +   + T   ++S+ + +L+ K                  NF P + + RRL
Sbjct: 418 VLPHLVPAWDYSLGTFNQIKSIKRFLLLSKRRSALITQCLKDSETSKPNFMPRLYINRRL 477

Query: 204 TTKSKQ--TVKP-----IFAQISRQVV---KMKGS-DLRLPSRA---WKVKLLGEGADDA 249
             + +   ++ P     +F+Q+   +    K++ + D R P+R    W+ K + EG  D 
Sbjct: 478 AMEHRDNPSLDPSCKNAVFSQVYEGLKPSDKLEKTLDYRWPARYDQWWECKFIAEGIIDQ 537

Query: 250 GGVFDDTITEMCGELLSGA------VPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLM 303
           GG F D++ +M  EL   +      +P  +RT N  +     RD Y+ NP    S +   
Sbjct: 538 GGGFRDSLADMSEELCPSSAECPIPLPFFLRTSNQGSLEA--RDYYVPNP----SCKDFQ 591

Query: 304 HFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFT-DLEDNDTLYAQSLRAIRDIH 362
            ++++G L G A+R K  L L L  LVWK +  E ++++ D    D++    L A+ ++ 
Sbjct: 592 KYEWIGQLMGAALRGKDFLVLALPGLVWKQLTGEAISWSKDFPSVDSVLVNLLEAMENMD 651

Query: 363 LSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQY 409
                E  F E +    +      G++  ++ GG SV + + +R ++
Sbjct: 652 -KETFEFRFGEEL---VYNTLLTDGQMVELIPGGSSVAVRYEDRSEF 694


>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 683

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +H+AVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGKVYAAGGNNEGQLGLGDTEERST 129



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT +    VP+ +  +    +  ++CG NH
Sbjct: 248 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDMG-LMYTFGDGRHGKLGLG 330



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT+ G LYTFG  + G+LG  +   +N ++P+ V  +    V+ V+CG  
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  KAVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--KAVYTFGLGQFGQLGLG 277



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERV 455
           SVP    +      + IACG  H+A++T  G +YTFG+G +G+LG G   + N  +P   
Sbjct: 284 SVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLC 343

Query: 456 VALNKVHVESVSCGLNHTVCIA 477
               +  V+ VSCG  HT+  A
Sbjct: 344 SNFLRFIVQLVSCGGCHTLVFA 365



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     +    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +  +G+ +Y FG+ E GKLGL N
Sbjct: 203 AFVTTEGQ-LYTFGEPECGKLGLPN 226



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+   F+N     +S G EH   V+   +++ +G+N+  QLGLG++    +P  V A
Sbjct: 24  ENIPSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKA 83

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L  + ++  + GR+H+   T
Sbjct: 84  LKPEKVKFAACGRNHTLVST 103



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K I  +S G 
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGY 199

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 200 YHSAFVT 206



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G+V+A G N++ QLGLG+        L+    S +
Sbjct: 81  VKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR 140

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +++ACG +HS   T  G ++++G G YG LG G + +   P RVV L+ V V SV CG  
Sbjct: 171 SSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWR 230

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           H+  + D+G+ V+ FG  +YG+LG G+
Sbjct: 231 HSAVVTDEGR-VFTFGWSKYGQLGHGD 256



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 1/93 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ CG++HSAVVT  G ++TFG   YG+LGHG  ++   P  V  L    V +V+ G  H
Sbjct: 224 SVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRH 283

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           T+  AD    +YA+G  ++G+LGLG++  +  P
Sbjct: 284 TM-AADSEGNLYAWGWNKFGQLGLGDSEDRAAP 315



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 5/147 (3%)

Query: 365 GVTEANFPEIIPLECFEGASWTGRITPIVTGGQS----VPLTFANRLQYYEAAIACGFKH 420
           GV+  +   I  L+C   ASW       +  GQ+     P   A        A+ CG ++
Sbjct: 14  GVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEY 73

Query: 421 S-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           + AV +S G +Y++G GD+GRLGHG   +  VP  +   +   V  V+CG  HT+ +   
Sbjct: 74  TVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQG 133

Query: 480 GKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             A+Y FG  + G+LGLG+T    +PQ
Sbjct: 134 DGALYTFGRNQNGQLGLGHTNDCLSPQ 160



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 2/95 (2%)

Query: 412 AAIACGFKHSAVVT-SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           A +ACG  H+ VVT  +G LYTFG    G+LG G T +   P+ V AL    V SV+CG 
Sbjct: 118 ARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGS 177

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            H++   + G  V+++G G YG LG G++  + TP
Sbjct: 178 EHSLAATEAGT-VFSWGWGRYGNLGDGDSQDRYTP 211



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVS-NTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           R I  F    +  ++ G  H L V+   G ++ +G N + QLGLG+  +   PQLV AL 
Sbjct: 107 RPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQ 166

Query: 66  NKNIRQVSAGRSHSAA 81
            + +  V+ G  HS A
Sbjct: 167 GERVSSVACGSEHSLA 182



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 34/72 (47%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A +   +  ++ G+EH LA +  G VF+WG      LG G+  +   P  V+ L    
Sbjct: 162 VTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVT 221

Query: 69  IRQVSAGRSHSA 80
           +  V  G  HSA
Sbjct: 222 VTSVVCGWRHSA 233



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 13/110 (11%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           P   A       + +A G++H+    S G LY +G   +G+LG G + +   P  V    
Sbjct: 263 PCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFG 322

Query: 460 KV------------HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
                          V  ++CG  HTV + + G+ VY++G G  G+LG G
Sbjct: 323 LAGGGVEAGAATPRRVALLACGWRHTVAVTEAGE-VYSWGRGVNGQLGHG 371



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 34/69 (49%)

Query: 13 KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
          +   ++ +S G+ H +A+ + G V +WG   D QLG G       P  + AL++  +  V
Sbjct: 8  EEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAV 67

Query: 73 SAGRSHSAA 81
            G  ++ A
Sbjct: 68 VCGAEYTVA 76



 Score = 41.6 bits (96), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 19/73 (26%), Positives = 36/73 (49%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +     + +  +  G  H   V++ G+VF +G +   QLG G+ +++  P LV  L +  
Sbjct: 214 VVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCR 273

Query: 69  IRQVSAGRSHSAA 81
           +  V+ G  H+ A
Sbjct: 274 VSTVAGGWRHTMA 286



 Score = 39.3 bits (90), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 9   IPAFKNIHIVDISVGTEHVLAV-SNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I A  +  +  +  G E+ +AV S+ GQ+++WG     +LG G   +   P+ +   S +
Sbjct: 56  IAALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGR 115

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI 108
            + +V+ G +H+   T      +T G   +  L LG   D 
Sbjct: 116 PVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDC 156


>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
          Length = 918

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVV----TSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
            P    +   Y+ A +ACG  HSA +         L+T G G  GRLGHG   +  +P  
Sbjct: 132 TPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTA 191

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           V AL  V++ +++CG +HT C+   G  +Y +G   +GKLGLG+T
Sbjct: 192 VHALENVNITAIACGAHHTACVTSAGT-LYTWGGAAFGKLGLGST 235



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G    AVV  +G LY +G    G+LG G   +  VP  V AL+   V++V+C   HT
Sbjct: 18  VSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALHGKVVKAVACSQEHT 77

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           VC  D G A YA+G    G+LGL
Sbjct: 78  VCCLDDGSA-YAWGCALNGRLGL 99



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 45/73 (61%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R + A KNI+   +S G   +  V+++G+++ WG NS+ QLG G++ +   P+LV AL  
Sbjct: 5  RLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALHG 64

Query: 67 KNIRQVSAGRSHS 79
          K ++ V+  + H+
Sbjct: 65 KVVKAVACSQEHT 77



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 5/77 (6%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT--TMNWKVPERVVALNKVHVESVSCGL 470
           ++A G +HSA VT++G LYT+G G   RLGH      +  +P RV AL  + V  V CG 
Sbjct: 256 SVALGSQHSACVTTDGELYTWGQGR--RLGHEVQGESDEILPRRVEALLGLFVIHVVCGD 313

Query: 471 NHTVCIADKGKAVYAFG 487
            HT CI + G  V+A+G
Sbjct: 314 AHTACIVENGN-VWAWG 329



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)

Query: 7   RHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           RH+P    A +N++I  I+ G  H   V++ G ++ WG  +  +LGLG   + R  QL+ 
Sbjct: 186 RHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLG---STRGSQLLP 242

Query: 63  A-----LSNKNIRQVSAGRSHSAAWT 83
                 L NK +  V+ G  HSA  T
Sbjct: 243 KHVSGPLRNKAVVSVALGSQHSACVT 268


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +AI+CG  H+A+VTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 466 SAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVW 525

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 526 HTAAVVEVMVGNSSSSNCSSGK-IFTWGDGDKGRLGHGDKDTRLVP 570



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+GNG  + G LGHG  ++  VP+RV   L  +HV ++SCG 
Sbjct: 413 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGP 472

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 473 WHTAIVTSAGQ-LFTFGDGSFGVLGHGD 499



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA +L      I+CG +H+ +VT  G +Y++G    GRLGHG   +   P+ + AL 
Sbjct: 349 PLEFAVKLDVQN--ISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 406

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +G+G    G LG GN
Sbjct: 407 NMNIELVACGEYHTCAVTLSGD-LYTWGNGTSNSGLLGHGN 446



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     IACG   +  +T++G++YT G+  YG+LG+    +  +P RV   
Sbjct: 569 VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGK 627

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE +SCG  H   +  + + VY +G G  G+LG G+T  + +P
Sbjct: 628 LHKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRSSP 674



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 399 VPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P+    +L + +   I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V A
Sbjct: 620 LPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEA 679

Query: 458 LNKVHVESVSCGLNHTVCIA 477
           L    V +V CG+N T  I 
Sbjct: 680 LKDKQVRTVVCGINFTAAIC 699



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS G  H   V+  G++++WG  S  +LG G   +  +P+L+ AL+N NI  V+ 
Sbjct: 356 LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVAC 415

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 416 GEYHTCAVT 424



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG      VP  V AL + +
Sbjct: 521 ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPN 580

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              ++CG   TV +   G  VY  G   YG+LG
Sbjct: 581 FCQIACGHCMTVALTTSGH-VYTMGSPVYGQLG 612



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K +R V  G 
Sbjct: 633 VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGI 692

Query: 77  SHSAA 81
           + +AA
Sbjct: 693 NFTAA 697



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQ--LGLGNQINYREPQLVLA-LS 65
           I A  N++I  ++ G  H  AV+ +G ++ WGN +     LG GN++++  P+ V   L 
Sbjct: 402 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 461

Query: 66  NKNIRQVSAGRSHSAAWTA 84
             ++  +S G  H+A  T+
Sbjct: 462 GIHVSAISCGPWHTAIVTS 480



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 460 LEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVR 519

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 520 AACGVWHTAA 529



 Score = 38.5 bits (88), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 85/228 (37%), Gaps = 46/228 (20%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  V  + G  H  AV             ++G++F WG+    +LG G++  
Sbjct: 507 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDT 566

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGH 114
              P  V AL   N  Q++ G   + A T       T GH       +G P  +    G+
Sbjct: 567 RLVPTCVAALVEPNFCQIACGHCMTVALT-------TSGHV----YTMGSP--VYGQLGN 613

Query: 115 LQNKPLPLIRARLKLLNRFSDLI----YQVVRLLPLGNVDQDWVQCTPYSW-------LV 163
            Q   +  +R   KL   F + I    Y V  L     V         Y+W       L 
Sbjct: 614 PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEV---------YTWGKGANGRLG 664

Query: 164 HPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTV 211
           H       +P +      + V +T++ G NF  ++ + +  +   Q++
Sbjct: 665 HGDTDDRSSPTLVEALKDKQV-RTVVCGINFTAAICIHKWVSGVDQSM 711


>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
 gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
           adhaerens]
          Length = 330

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 58/79 (73%), Gaps = 3/79 (3%)

Query: 9   IPAFKNIHIVDISVGTEH---VLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           I +FK+ +++DIS    H   V +V+NTG V+++G+NS++QLG+G+   Y EPQLV  L+
Sbjct: 79  IASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLGVGDTEPYAEPQLVTVLN 138

Query: 66  NKNIRQVSAGRSHSAAWTA 84
           ++NI +V+ G+ HSAA +A
Sbjct: 139 DENIIKVACGKYHSAALSA 157



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTS---NGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
            PL  A+        I+C   H+A VTS    G +Y+FG+    +LG G T  +  P+ V
Sbjct: 75  APLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLGVGDTEPYAEPQLV 134

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             LN  ++  V+CG  H+  ++ KG  ++ +G G+ G+LGLGN  L   P
Sbjct: 135 TVLNDENIIKVACGKYHSAALSAKGN-LFLWGLGDDGQLGLGNYNLSTEP 183



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+ ++T  G +Y FG+  YG++   +   + +P R+         SVSCG  H+
Sbjct: 198 VACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHS 257

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             I + GK +YA+G    G+LGLG+   + +P
Sbjct: 258 AAITENGK-LYAWGLETDGRLGLGDCKQRSSP 288



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 37/65 (56%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            V +S G+ H  A++  G+++AWG  +D +LGLG+      P  V    +K I +++ G 
Sbjct: 247 FVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTEVEGFRDKKIGRIACGS 306

Query: 77  SHSAA 81
            H+AA
Sbjct: 307 KHTAA 311



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           +YT+G+G  G LGHG  ++   P  V AL   +++ ++CGL+    +  +   VY++G G
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60

Query: 490 EYGKLGLGN 498
           +YG LG GN
Sbjct: 61  KYGILGQGN 69



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 9/131 (6%)

Query: 384 SWTGRITPIVTGGQSV----PLTFANRLQYYEAAIACGFKHS--AVVTSNGYLYTFGNGD 437
           +W   I   +  G+ +    P      L Y    +ACG  H+  A+   +G +Y++G G 
Sbjct: 3   TWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGL-HTVFALNAEDGKVYSWGLGK 61

Query: 438 YGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD--KGKAVYAFGDGEYGKLG 495
           YG LG G   +   P ++ +    +V  +SC   H   +       +VY+FGD    +LG
Sbjct: 62  YGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLG 121

Query: 496 LGNTGLKPTPQ 506
           +G+T     PQ
Sbjct: 122 VGDTEPYAEPQ 132



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 31/64 (48%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +++CG  HSA +T NG LY +G    GRLG G       P  V       +  ++CG  H
Sbjct: 249 SVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTEVEGFRDKKIGRIACGSKH 308

Query: 473 TVCI 476
           T  +
Sbjct: 309 TAAL 312



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           +    + +I+ ++ G  H  A+S  G +F WG   D QLGLGN     EP ++ +     
Sbjct: 134 VTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTILHIGEKKA 193

Query: 68  NIRQVSAGRSHSAAWTAPPL 87
            +  V+ G  H+   T   L
Sbjct: 194 KVMDVACGDLHTCILTVGGL 213


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 9/101 (8%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H+A+++S G L+ +G+G +G LGHG T+    P++V +L  V  ++++CG  HT
Sbjct: 315 IACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHT 374

Query: 474 VCIADKGKAV---------YAFGDGEYGKLGLGNTGLKPTP 505
             I ++   V         + +GD + GKLG  +  +K  P
Sbjct: 375 AAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVP 415



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 54/84 (64%), Gaps = 2/84 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG KH+A+VT  G ++++G  + GRLGH  +++   P+ + +L    V++++ G  H
Sbjct: 207 SVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKH 266

Query: 473 TVCIADKGKAVYAFGDGEYGKLGL 496
           T  ++  G+ +Y +G+G +  LGL
Sbjct: 267 TCAVSISGE-LYEWGEGTHC-LGL 288



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 38/64 (59%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            K   + +IS G+ H+  ++  G+VF WG  ++ QLGLG+ ++   P LV AL +K +  
Sbjct: 473 LKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHS 532

Query: 72  VSAG 75
           ++ G
Sbjct: 533 IACG 536



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 413 AIACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           AIACG  H+A +            +G L+T+G+ D G+LGH       VP  V  LN   
Sbjct: 366 AIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFD 425

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              VSC    T+ +   G  V+  G  E+G+LG
Sbjct: 426 FAQVSCAKAQTIVLTITG-VVFTIGSKEHGRLG 457



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDY--GRLGHG 444
           GR+   V+   S P    +       AIA G KH+  V+ +G LY +G G +  G  G  
Sbjct: 233 GRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQ 292

Query: 445 TTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
              +   P ++   L+ + +  ++CG  HT  I+  G+ ++A+GDG +G LG G+T
Sbjct: 293 YQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQ-LFAYGDGTFGVLGHGDT 347



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+   GR+   ++   S+ L        +   I+ G  H AV+T NG ++T+G G  G+L
Sbjct: 449 GSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQL 508

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           G G  ++   P  V AL    V S++CG N T+ I 
Sbjct: 509 GLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAIC 544



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 16  HIVDI---SVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           HI+D+   + G +H   V+  G+VF+WG ++  +LG    ++  +P+++ +L++  ++ +
Sbjct: 201 HIIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAI 260

Query: 73  SAGRSHSAA 81
           + G  H+ A
Sbjct: 261 AFGAKHTCA 269



 Score = 45.1 bits (105), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++C    + V+T  G ++T G+ ++GRLG+  + +  +      L    V  +S G +
Sbjct: 427 AQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSS 486

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           H   +   GK V+ +G G  G+LGLG+
Sbjct: 487 HIAVLTMNGK-VFTWGKGTEGQLGLGD 512



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I I+ I+ G  H   +S+ GQ+FA+G+ +   LG G+ +    P+ V +L     + ++ 
Sbjct: 310 ISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIAC 369

Query: 75  GRSHSAA 81
           G  H+AA
Sbjct: 370 GPWHTAA 376


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 10/90 (11%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV----ESVSC 468
           ++ACG+ H+A VT  G ++TFG GD G+LG GT        + VA  KV++    +SV+C
Sbjct: 193 SVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYG-----KAVAPKKVNIPEKAKSVAC 247

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           G +HTV + + GK VY FG+G  G+LG  N
Sbjct: 248 GGSHTVVLTECGK-VYTFGEGGNGQLGHKN 276



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 4/85 (4%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLN 471
           ++ACG  H+ V+T  G +YTFG G  G+LGH     +   E  V LN  H V  ++ G N
Sbjct: 244 SVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFY--CETPVWLNFKHKVTQIAAGEN 301

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGL 496
           HT  + +KG+ +Y FGDG + KLGL
Sbjct: 302 HTALVTEKGQ-LYTFGDGRHAKLGL 325



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 3/85 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A+A G  HS  +T +G LY +G G  G+LG G   +   P  +   NKV   SV+CG  H
Sbjct: 143 ALAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDNKVI--SVACGYYH 200

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  + D G+ V+ FG+G+ GKLG G
Sbjct: 201 TAFVTDVGE-VFTFGEGDGGKLGQG 224



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG +H+A+VT +G L+TFG  D+G+LG         P  V  L    V+ V+CG  H
Sbjct: 40  SVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIH 99

Query: 473 TVCIADKGKAVYAFGDGEYGKLGL 496
           T+   + G  +Y FG    G+LG+
Sbjct: 100 TIVATESG-CLYTFGANGDGQLGV 122



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 4/93 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFG-NGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V T +G LYTFG NGD G+LG     +   P +V    + + ++++ G +H
Sbjct: 93  VACGRIHTIVATESGCLYTFGANGD-GQLGVEDIPSSNCPVKVECEPRQY-KALAAGADH 150

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +V + D G+ +Y +G G  G+LGLG+   K TP
Sbjct: 151 SVALTDDGE-LYVWGGGSEGQLGLGDIDDKSTP 182



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           IA G  H+A+VT  G LYTFG+G + +LG  H    N   P+R    +K  V  VSCG  
Sbjct: 296 IAAGENHTALVTEKGQLYTFGDGRHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCGGC 355

Query: 472 HTVCIA 477
           H + +A
Sbjct: 356 HMIVLA 361



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 2/61 (3%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G +H +A+++ G+++ WG  S+ QLGLG+  +   P L L+  NK I  V+ G  H+
Sbjct: 144 LAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTL-LSTDNKVI-SVACGYYHT 201

Query: 80  A 80
           A
Sbjct: 202 A 202



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G  H + ++  G+V+ +G   + QLG  N+  Y E  + L   +K + Q++AG +H+
Sbjct: 245 VACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPVWLNFKHK-VTQIAAGENHT 303

Query: 80  AAWT 83
           A  T
Sbjct: 304 ALVT 307


>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 247 LACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHT 306

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT 499
           +  ++D GK V++FG G+ G+LG G T
Sbjct: 307 LAYVSDFGK-VFSFGSGKDGQLGNGGT 332



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  ++G+LG G T +   P  + AL+   VE ++CG +
Sbjct: 193 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGS 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  +   G  ++ FG G++G+LG  +T
Sbjct: 253 HSALLTQDG-LLFTFGAGKHGQLGHNST 279



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 47/86 (54%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S T+ + +     + +  IS G  H +A+S +G +++WG N   QLGLG+  +   P L+
Sbjct: 177 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLI 236

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPL 87
            AL N+ +  ++ G SHSA  T   L
Sbjct: 237 EALDNQKVEFLACGGSHSALLTQDGL 262



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G T  +   P+ V  L  V +  +S G  H
Sbjct: 142 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  +Y++G  E+G+LGLG+T  K +P
Sbjct: 202 SMALSMSGN-IYSWGKNEFGQLGLGHTESKDSP 233



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G    +   PQ+V  L+   + Q+SAG
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAG 198

Query: 76  RSHSAA 81
            +HS A
Sbjct: 199 EAHSMA 204



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 35/76 (46%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  N  +  ++ G  H   ++  G +F +G     QLG  +  N   P LV  L    
Sbjct: 236 IEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNR 295

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 296 VTQIACGRWHTLAYVS 311


>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 247 LACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHT 306

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT 499
           +  ++D GK V++FG G+ G+LG G T
Sbjct: 307 LAYVSDFGK-VFSFGSGKDGQLGNGGT 332



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  ++G+LG G T +   P  + AL+   VE ++CG +
Sbjct: 193 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGS 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  +   G  ++ FG G++G+LG  +T
Sbjct: 253 HSALLTQDG-LLFTFGAGKHGQLGHNST 279



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 47/86 (54%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S T+ + +     + +  IS G  H +A+S +G +++WG N   QLGLG+  +   P L+
Sbjct: 177 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLI 236

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPL 87
            AL N+ +  ++ G SHSA  T   L
Sbjct: 237 EALDNQKVEFLACGGSHSALLTQDGL 262



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G T  +   P+ V  L  V +  +S G  H
Sbjct: 142 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  +Y++G  E+G+LGLG+T  K +P
Sbjct: 202 SMALSMSGN-IYSWGKNEFGQLGLGHTESKDSP 233



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G    +   PQ+V  L+   + Q+SAG
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAG 198

Query: 76  RSHSAA 81
            +HS A
Sbjct: 199 EAHSMA 204



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 35/76 (46%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  N  +  ++ G  H   ++  G +F +G     QLG  +  N   P LV  L    
Sbjct: 236 IEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNR 295

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 296 VTQIACGRWHTLAYVS 311


>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
          Length = 854

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 173 LACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHT 232

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT 499
           +  ++D GK V++FG G+ G+LG G T
Sbjct: 233 LAYVSDFGK-VFSFGSGKDGQLGNGGT 258



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  ++G+LG G T +   P  + AL+   VE ++CG +
Sbjct: 119 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGS 178

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  +   G  ++ FG G++G+LG  +T
Sbjct: 179 HSALLTQDG-LLFTFGAGKHGQLGHNST 205



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 47/86 (54%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S T+ + +     + +  IS G  H +A+S +G +++WG N   QLGLG+  +   P L+
Sbjct: 103 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLI 162

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPL 87
            AL N+ +  ++ G SHSA  T   L
Sbjct: 163 EALDNQKVEFLACGGSHSALLTQDGL 188



 Score = 45.1 bits (105), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 421 SAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           S  +   G L+ +G   +G+LG G    +   P+ V  L  V +  +S G  H++ ++  
Sbjct: 75  SRFIVRGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMS 134

Query: 480 GKAVYAFGDGEYGKLGLGNTGLKPTP 505
           G  +Y++G  E+G+LGLG+T  K +P
Sbjct: 135 GN-IYSWGKNEFGQLGLGHTESKDSP 159



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 34  GQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAGRSHSAA 81
           G++FAWG N   QLG+G +  +   PQ+V  L+   + Q+SAG +HS A
Sbjct: 82  GELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMA 130



 Score = 39.3 bits (90), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 35/76 (46%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  N  +  ++ G  H   ++  G +F +G     QLG  +  N   P LV  L    
Sbjct: 162 IEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNR 221

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 222 VTQIACGRWHTLAYVS 237


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G   +G LGHG  ++  VP+RV   L  +HV S+SCG 
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGP 427

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  +   G+ ++ FGDG +G LG G+      P+
Sbjct: 428 WHTALVTSAGQ-LFTFGDGSFGVLGHGDRASLSVPR 462



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA RL      I+CG +H+A+VT  G +Y++G    GRLGHG   +   P+ + +L 
Sbjct: 304 PLEFAVRLDVQN--ISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +GDG  ++G LG GN
Sbjct: 362 HMNIELVACGEYHTCAVTLSGD-LYTWGDGTFKFGLLGHGN 401



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+A+VTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 421 SSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVW 480

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGK-IFTWGDGDKGRLGHGDKDSRFVP 525



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V SV CG+N T
Sbjct: 591 ISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFT 650

Query: 474 VCIA 477
             I 
Sbjct: 651 AAIC 654



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+    +  +P RV   
Sbjct: 524 VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGK 582

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE +SCG  H   +  + + VY +G G  G+LG G T  K TP
Sbjct: 583 LHKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGGTDDKNTP 629



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG   +  VP  V AL + +
Sbjct: 476 ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPN 535

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG   TV +   G  VY  G   YG+LG
Sbjct: 536 FCQVACGHCLTVALTTSGH-VYTMGSAVYGQLG 567



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS G  H   V+  G++++WG  S  +LG G   +  +P+L+ +L++ NI  V+ 
Sbjct: 311 LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVAC 370

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 371 GEYHTCAVT 379



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 37/65 (56%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG G   +   P LV AL +K +R V  G 
Sbjct: 588 VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGI 647

Query: 77  SHSAA 81
           + +AA
Sbjct: 648 NFTAA 652



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 415 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVR 474

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 475 AACGVWHTAA 484


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G   +G LGHG  ++  VP+RV   L  +HV S+SCG 
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGP 427

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  +   G+ ++ FGDG +G LG G+      P+
Sbjct: 428 WHTALVTSAGQ-LFTFGDGSFGVLGHGDRASLSVPR 462



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA RL      I+CG +H+A+VT  G +Y++G    GRLGHG   +   P+ + +L 
Sbjct: 304 PLEFAVRLDVQN--ISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +GDG  ++G LG GN
Sbjct: 362 HMNIELVACGEYHTCAVTLSGD-LYTWGDGTFKFGLLGHGN 401



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+A+VTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 421 SSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVW 480

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGK-IFTWGDGDKGRLGHGDKDSRFVP 525



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V SV CG+N T
Sbjct: 591 ISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFT 650

Query: 474 VCIA 477
             I 
Sbjct: 651 AAIC 654



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+    +  +P RV   
Sbjct: 524 VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGK 582

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE +SCG  H   +  + + VY +G G  G+LG G T  K TP
Sbjct: 583 LHKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGGTDDKNTP 629



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG   +  VP  V AL + +
Sbjct: 476 ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPN 535

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG   TV +   G  VY  G   YG+LG
Sbjct: 536 FCQVACGHCLTVALTTSGH-VYTMGSAVYGQLG 567



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS G  H   V+  G++++WG  S  +LG G   +  +P+L+ +L++ NI  V+ 
Sbjct: 311 LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVAC 370

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 371 GEYHTCAVT 379



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 37/65 (56%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG G   +   P LV AL +K +R V  G 
Sbjct: 588 VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGI 647

Query: 77  SHSAA 81
           + +AA
Sbjct: 648 NFTAA 652



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 415 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVR 474

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 475 AACGVWHTAA 484


>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 883

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HSA++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 181 LACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHT 240

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT 499
           +  ++D GK V++FG G+ G+LG G T
Sbjct: 241 LAYVSDFGK-VFSFGSGKDGQLGNGGT 266



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  ++G+LG G T +   P  + AL+   VE ++CG +
Sbjct: 127 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGS 186

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H+  +   G  ++ FG G++G+LG  +T
Sbjct: 187 HSALLTQDG-LLFTFGAGKHGQLGHNST 213



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)

Query: 6   GRHIPAFKNIHIVD---------ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           GR  P+     IV+         IS G  H +A+S +G +++WG N   QLGLG+  +  
Sbjct: 106 GRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD 165

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWTAPPL 87
            P L+ AL N+ +  ++ G SHSA  T   L
Sbjct: 166 SPSLIEALDNQKVEFLACGGSHSALLTQDGL 196



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 425 TSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAV 483
           T +G L+ +G   +G+LG G    +   P+ V  L  V +  +S G  H++ ++  G  +
Sbjct: 87  TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN-I 145

Query: 484 YAFGDGEYGKLGLGNTGLKPTP 505
           Y++G  E+G+LGLG+T  K +P
Sbjct: 146 YSWGKNEFGQLGLGHTESKDSP 167



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 33  TGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAGRSHSAA 81
           +G++FAWG N   QLG+G +  +   PQ+V  L+   + Q+SAG +HS A
Sbjct: 89  SGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMA 138



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 35/76 (46%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  N  +  ++ G  H   ++  G +F +G     QLG  +  N   P LV  L    
Sbjct: 170 IEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNR 229

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 230 VTQIACGRWHTLAYVS 245


>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
          Length = 1199

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG N
Sbjct: 28  AFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRN 87

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           HT+   + GK VYA G    G+LGLG+T
Sbjct: 88  HTLVSTEGGK-VYASGGNNEGQLGLGDT 114



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 6/94 (6%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT+ G LYTFG  + G+LG      +N ++P+ V  + +  V+ V+CG  
Sbjct: 185 ISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEKVVQ-VACGGG 243

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HTV + +  KAVY FG G++G+LGLG T L  TP
Sbjct: 244 HTVVLTE--KAVYTFGLGQFGQLGLG-TFLFETP 274



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT +    VP+ +  +  + + S+ CG NH
Sbjct: 238 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENH 296

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 297 TALITDLG-LMYTFGDGRHGKLGLG 320



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCG 469
           ++I CG  H+A++T  G +YTFG+G +G+LG G     N   P       +  V+ V+CG
Sbjct: 288 SSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACG 347

Query: 470 LNHTVCIA 477
             HT+  A
Sbjct: 348 GCHTLVFA 355



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 5/92 (5%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K I  +S G 
Sbjct: 132 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTV--GKPISWISCGY 189

Query: 77  SHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI 108
            HSA  T      +T G   S   +LGLP+ +
Sbjct: 190 YHSAFVTTEG-ELYTFGEPESG--KLGLPKQL 218



 Score = 45.1 bits (105), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 7  RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           +IP+   FKN     +S G EH   V+   +++ +G+N+  QLGLG++    +P  V A
Sbjct: 14 ENIPSKFWFKNDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKA 73

Query: 64 LSNKNIRQVSAGRSHSAAWT 83
          L  + ++  + GR+H+   T
Sbjct: 74 LKPEKVKFAACGRNHTLVST 93



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G+V+A G N++ QLGLG+        L+    S +
Sbjct: 71  VKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQR 130

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 131 KIKQLSAGSNTSAALT 146


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G   +G LGHG  ++  VP+RV   L  +HV S+SCG 
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGP 427

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  +   G+ ++ FGDG +G LG G+      P+
Sbjct: 428 WHTALVTSAGQ-LFTFGDGSFGVLGHGDRASLSVPR 462



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA RL      I+CG +H+A+VT  G +Y++G    GRLGHG   +   P+ + +L 
Sbjct: 304 PLEFAVRLDVQN--ISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +GDG  ++G LG GN
Sbjct: 362 HMNIELVACGEYHTCAVTLSGD-LYTWGDGTFKFGLLGHGN 401



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+A+VTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 421 SSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVW 480

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGK-IFTWGDGDKGRLGHGDKDSRFVP 525



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V SV CG+N T
Sbjct: 591 ISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFT 650

Query: 474 VCIA 477
             I 
Sbjct: 651 AAIC 654



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+    +  +P RV   
Sbjct: 524 VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGK 582

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE +SCG  H   +  + + VY +G G  G+LG G T  K TP
Sbjct: 583 LHKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGGTDDKNTP 629



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG   +  VP  V AL + +
Sbjct: 476 ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPN 535

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG   TV +   G  VY  G   YG+LG
Sbjct: 536 FCQVACGHCLTVALTTSGH-VYTMGSAVYGQLG 567



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS G  H   V+  G++++WG  S  +LG G   +  +P+L+ +L++ NI  V+ 
Sbjct: 311 LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVAC 370

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 371 GEYHTCAVT 379



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 37/65 (56%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG G   +   P LV AL +K +R V  G 
Sbjct: 588 VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGI 647

Query: 77  SHSAA 81
           + +AA
Sbjct: 648 NFTAA 652



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 415 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVR 474

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 475 AACGVWHTAA 484


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +AI+CG  H+A+VTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 420 SAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVW 479

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGK-IFTWGDGDKGRLGHGDKDTRLVP 524



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+GNG  + G LGHG  ++  VP+RV   L  +HV ++SCG 
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGP 426

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 427 WHTAIVTSAGQ-LFTFGDGSFGVLGHGD 453



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA +L      I+CG +H+ +VT  G +Y++G    GRLGHG   +   P+ + AL 
Sbjct: 303 PLEFAVKLDVQN--ISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +G+G    G LG GN
Sbjct: 361 NMNIELVACGEYHTCAVTLSGD-LYTWGNGTSNSGLLGHGN 400



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     IACG   +  +T++G++YT G+  YG+LG+    +  +P RV   
Sbjct: 523 VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGK 581

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE +SCG  H   +  + + VY +G G  G+LG G+T  + +P
Sbjct: 582 LHKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRSSP 628



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 399 VPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P+    +L + +   I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V A
Sbjct: 574 LPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEA 633

Query: 458 LNKVHVESVSCGLNHTVCIA 477
           L    V +V CG+N T  I 
Sbjct: 634 LKDKQVRTVVCGINFTAAIC 653



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS G  H   V+  G++++WG  S  +LG G   +  +P+L+ AL+N NI  V+ 
Sbjct: 310 LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVAC 369

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 370 GEYHTCAVT 378



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG      VP  V AL + +
Sbjct: 475 ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPN 534

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              ++CG   TV +   G  VY  G   YG+LG
Sbjct: 535 FCQIACGHCMTVALTTSGH-VYTMGSPVYGQLG 566



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K +R V  G 
Sbjct: 587 VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGI 646

Query: 77  SHSAA 81
           + +AA
Sbjct: 647 NFTAA 651



 Score = 39.7 bits (91), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQ--LGLGNQINYREPQLVLA-LS 65
           I A  N++I  ++ G  H  AV+ +G ++ WGN +     LG GN++++  P+ V   L 
Sbjct: 356 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 415

Query: 66  NKNIRQVSAGRSHSAAWTA 84
             ++  +S G  H+A  T+
Sbjct: 416 GIHVSAISCGPWHTAIVTS 434



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 414 LEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVR 473

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 474 AACGVWHTAA 483



 Score = 38.1 bits (87), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 85/228 (37%), Gaps = 46/228 (20%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  V  + G  H  AV             ++G++F WG+    +LG G++  
Sbjct: 461 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDT 520

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGH 114
              P  V AL   N  Q++ G   + A T       T GH       +G P  +    G+
Sbjct: 521 RLVPTCVAALVEPNFCQIACGHCMTVALT-------TSGHV----YTMGSP--VYGQLGN 567

Query: 115 LQNKPLPLIRARLKLLNRFSDLI----YQVVRLLPLGNVDQDWVQCTPYSW-------LV 163
            Q   +  +R   KL   F + I    Y V  L     V         Y+W       L 
Sbjct: 568 PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEV---------YTWGKGANGRLG 618

Query: 164 HPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTV 211
           H       +P +      + V +T++ G NF  ++ + +  +   Q++
Sbjct: 619 HGDTDDRSSPTLVEALKDKQV-RTVVCGINFTAAICIHKWVSGVDQSM 665


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG KH+  +  +G +YT G  D G+LGH  +   K PE VVAL+   + +VSCG +HT
Sbjct: 39  VGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKSR--KKPEHVVALDAQIIVAVSCGESHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + + DKG+ V+++G G  G+LGL N
Sbjct: 97  LALNDKGQ-VFSWGLGSNGQLGLNN 120



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALS 65
            H+ A     IV +S G  H LA+++ GQVF+WG  S+ QLGL N +   R P+ +  LS
Sbjct: 76  EHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DVQIAQVACGYWHSHA 151



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G ++++G G  G+LG        +VP  +  L+ V +  V+CG 
Sbjct: 87  VAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK-PTPQ 506
            H+  ++ KG  V+++G  ++G+LGLG  G    TPQ
Sbjct: 147 WHSHALS-KGGQVFSWGQNQFGQLGLGMHGSSISTPQ 182



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ-INYREPQLVLALS 65
           R+I    ++ I  ++ G  H  A+S  GQVF+WG N   QLGLG    +   PQ++ +L 
Sbjct: 129 RNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQ 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q+SAG +HS A T
Sbjct: 189 GIPFAQLSAGGAHSFAIT 206



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 54/91 (59%), Gaps = 6/91 (6%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG---HGTTMNWKVPERVVALNKVHVESVSC 468
           A +ACG+ HS  ++  G ++++G   +G+LG   HG++++   P+ + +L  +    +S 
Sbjct: 140 AQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGIPFAQLSA 197

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           G  H+  I   G AV+ +G  ++G+LGL +T
Sbjct: 198 GGAHSFAITLSG-AVFGWGKNKFGQLGLNDT 227



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++ G  HS  +T +G ++ +G   +G+LG   T +   P  + +L    V  VSCG +
Sbjct: 193 AQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGED 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +  K + V+ FG G YG+LG   T  +  P+
Sbjct: 253 HTAALT-KLRGVFTFGAGGYGQLGHNCTNHEINPR 286



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I + + I    +S G  H  A++ +G VF WG N   QLGL +  +   P L+ +L ++ 
Sbjct: 184 IQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQR 243

Query: 69  IRQVSAGRSHSAAWT 83
           +  VS G  H+AA T
Sbjct: 244 VIFVSCGEDHTAALT 258



 Score = 45.4 bits (106), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           ++CG  H+A +T    ++TFG G YG+LGH  T +   P +V  L    V  +SCG
Sbjct: 247 VSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKVFELMGNVVTQISCG 302



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F    + D+  G +H + + + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLG--HEKSRKKPEHVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          + I  VS G SH+ A
Sbjct: 84 QIIVAVSCGESHTLA 98



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P +    +   V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA RL      I+CG KH+A+V+  G +Y++G    GRLGHG   +   P+ + AL 
Sbjct: 306 PLEFAVRLDVQN--ISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALT 363

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +GDG  ++G LG GN
Sbjct: 364 HMNIELVACGEYHTCAVTLSGD-LYTWGDGTFKFGLLGHGN 403



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G   +G LGHG  ++  VP+++   L  +HV S+SCG 
Sbjct: 370 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEGIHVSSISCGP 429

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HTV +   G+ ++ FGDG +G LG G+
Sbjct: 430 FHTVIVTSAGQ-LFTFGDGSFGVLGHGD 456



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+ +VTS G L+TFG+G +G LGHG   +  VP+ V +L  +     +CG+ 
Sbjct: 423 SSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVW 482

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 483 HTAAVVEVMAGNSSSSNCSSGK-IFTWGDGDKGRLGHGDKESRLVP 527



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+    +  +P RV   
Sbjct: 526 VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN-PQADGMLPARVEGK 584

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE +SCG  H   +  + + VY +G G  G+LG GNT  K TP
Sbjct: 585 LHKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGNTDDKNTP 631



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 36/64 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V +V CG N T
Sbjct: 593 ISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFT 652

Query: 474 VCIA 477
             I 
Sbjct: 653 AAIC 656



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG   +  VP  V AL + +
Sbjct: 478 ACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEPN 537

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG   TV +   G  VY  G   YG+LG
Sbjct: 538 FCQVACGHCLTVALTTSGH-VYTMGSAVYGQLG 569



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS G +H   VS  G++++WG  S  +LG G   +   P+L+ AL++ NI  V+ 
Sbjct: 313 LDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVAC 372

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 373 GEYHTCAVT 381



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG GN  +   P LV AL +K +R V  G 
Sbjct: 590 VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGT 649

Query: 77  SHSAA 81
           + +AA
Sbjct: 650 NFTAA 654



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 38/70 (54%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H + V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 417 LEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVR 476

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 477 AACGVWHTAA 486


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 11/103 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+ T+NG L+TFG+G +G LGHG   +   P+ V  L+ +    V+CG+ H
Sbjct: 381 SVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWH 440

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           TV I +           + ++ +GDG+  +LG GN  T L PT
Sbjct: 441 TVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPT 483



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%)

Query: 399 VPLTFANRL--QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           +P    +RL  ++ E  I+CG  H AV+TS   ++T+G G  GRLGHG   + K P  V 
Sbjct: 532 LPCLVQDRLVGEFVEE-ISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVE 590

Query: 457 ALNKVHVESVSCGLNHT--VCI 476
           AL + HV+S+SCG N T  +CI
Sbjct: 591 ALRERHVKSISCGSNFTSSICI 612



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  V+++G L+T+G+G  + G LGHG+ ++  +P+RV   +  + V SV+CG 
Sbjct: 327 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGT 386

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK ++ FGDG +G LG G+
Sbjct: 387 WHSALATANGK-LFTFGDGAFGVLGHGD 413



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H A+VT  G ++T+     GRLGHG  ++   P+ V  L   +++ V+CG  HT
Sbjct: 275 IACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHT 334

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             ++  G  ++ +GDG +  G LG G+
Sbjct: 335 CAVSTSGD-LFTWGDGIHNVGLLGHGS 360



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 9/111 (8%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP----ER 454
           +P   ++ + Y    IACG   +  +T++G+++T G   +G+LG  +  + K+P    +R
Sbjct: 481 LPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSHGQLG-SSNSDGKLPCLVQDR 539

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +V      VE +SCG +H   +  + + V+ +G G  G+LG G+   + TP
Sbjct: 540 LVG---EFVEEISCGDHHVAVLTSRSE-VFTWGKGSNGRLGHGDKDDRKTP 586



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)

Query: 414 IACGFKHSAVV----------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  H+  +          TS+  L+T+G+GD  RLGHG    + +P  V +L   + 
Sbjct: 434 VACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNF 493

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
             ++CG   TV +   G  V+  G   +G+LG  N+
Sbjct: 494 NQIACGHTFTVALTTSGH-VFTMGGTSHGQLGSSNS 528



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +VF WG  S+ +LG G++ + + P LV AL  ++++ +S G 
Sbjct: 545 VEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGS 604

Query: 77  SHSAA 81
           + +++
Sbjct: 605 NFTSS 609



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G  H+  V+  G+VF W   +  +LG G Q++   P+LV  L+  NI  V+ 
Sbjct: 270 LDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVAC 329

Query: 75  GRSHSAA 81
           G  H+ A
Sbjct: 330 GEYHTCA 336


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  HSA +T +G ++T+G G YG+LGHG+T N K+P  V AL    V  ++CG +HT
Sbjct: 198 IACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHT 257

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + I   G+ ++++G G +G+ G G 
Sbjct: 258 LAITSDGR-LFSWGHGLWGQTGHGT 281



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 83/196 (42%), Gaps = 28/196 (14%)

Query: 312 FGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANF 371
            G+   +  P P  LS LV K IV    +     D  T +   L    +++ +G  +A  
Sbjct: 15  LGIGDYSDHPTPTSLSTLVGKDIVHIAAS-----DYHTAF---LTDEGEVYTTGSNDAGQ 66

Query: 372 PEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLY 431
             +  +E                  Q VP+  A    +    IACGFKH+  VT  G L 
Sbjct: 67  LGVRGME-----------------EQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALA 109

Query: 432 TFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489
           ++G  +YG+LG   G  ++   P  V     +H   V+ G  HT+ +   G  VY+FGDG
Sbjct: 110 SWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGD-VYSFGDG 168

Query: 490 EYGKLGLGNTGLKPTP 505
             G LG GN     TP
Sbjct: 169 SSGALGHGNLDGCSTP 184



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 1/82 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H+  +TS+G L+++G+G +G+ GHGT  +   P++V  L    +  VS G  HT
Sbjct: 250 IACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRVLVQVSAGARHT 309

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           V + D+G+ VY +GD E  +LG
Sbjct: 310 VVLLDRGE-VYGWGDCEQRQLG 330



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +   +++H   ++ G  H LA++ +G V+++G+ S   LG GN      P LV +L  
Sbjct: 133 RIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWG 192

Query: 67  KNIRQVSAGRSHSAAWT 83
             + Q++ G +HSAA T
Sbjct: 193 LGVTQIACGENHSAALT 209



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 41/71 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A  +  ++ I+ G +H LA+++ G++F+WG+    Q G G + +   P+ V  L  + 
Sbjct: 239 VKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRV 298

Query: 69  IRQVSAGRSHS 79
           + QVSAG  H+
Sbjct: 299 LVQVSAGARHT 309



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 7/149 (4%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + +   + +  I+ G  H  A++  G+VF WG     QLG G+  N + P  V AL + +
Sbjct: 187 VKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHD 246

Query: 69  IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI--PDHYGHLQNKPLPLIRAR 126
           + Q++ G  H+ A T+      + GH        G  +D+  P     L+ + L  + A 
Sbjct: 247 VIQIACGGDHTLAITSDG-RLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRVLVQVSAG 305

Query: 127 LK----LLNRFSDLIYQVVRLLPLGNVDQ 151
            +    LL+R     +       LG  D+
Sbjct: 306 ARHTVVLLDRGEVYGWGDCEQRQLGTCDR 334



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL--GNQINYREPQLVLALSN 66
           + A     +  I+ G +H +AV+ TG + +WG +   QLG   GN ++  +P++V    +
Sbjct: 81  VAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRD 140

Query: 67  KNIRQVSAGRSHSAAWTAP 85
            +  +V+AG  H+ A T  
Sbjct: 141 LHFSRVAAGGYHTLALTGS 159


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 248 LACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHT 307

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT 499
           +  ++D GK V++FG G+ G+LG G T
Sbjct: 308 LAYVSDLGK-VFSFGSGKEGQLGNGGT 333



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  ++G+LG   T +   P  + AL+   VE ++CG +
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGS 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           HT  +   G  ++ FG G++G+LG  +T
Sbjct: 254 HTALLTQDG-LLFTFGAGKHGQLGHNST 280



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G +  +   PQ+V  LS   + Q+SAG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAG 199

Query: 76  RSHSAA 81
            +HS A
Sbjct: 200 EAHSMA 205



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S T+ + +     I +  IS G  H +A+S +G +++WG N   QLGL +  +   P L+
Sbjct: 178 STTTPQIVEHLSGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLI 237

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPL 87
            AL N+ +  ++ G SH+A  T   L
Sbjct: 238 EALDNQKVEFLACGGSHTALLTQDGL 263



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L+ + +  +S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGEAH 202

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  +Y++G  E+G+LGL +T  K +P
Sbjct: 203 SMALSMSGN-IYSWGKNEFGQLGLDHTESKDSP 234



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 36/76 (47%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  N  +  ++ G  H   ++  G +F +G     QLG  +  N   P LV  L+   
Sbjct: 237 IEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNR 296

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 297 VTQIACGRWHTLAYVS 312


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T +G L+TFG G +G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 248 LACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHT 307

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT 499
           +  ++D GK V++FG G+ G+LG G T
Sbjct: 308 LAYVSDLGK-VFSFGSGKEGQLGNGGT 333



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 1/88 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS  ++ +G +Y++G  ++G+LG   T +   P  + AL+   VE ++CG +
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGS 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           HT  +   G  ++ FG G++G+LG  +T
Sbjct: 254 HTALLTQDG-LLFTFGAGKHGQLGHNST 280



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
           I+ I+ G  H LA+S  G++FAWG N   QLG+G +  +   PQ+V  L+   + Q+SAG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAG 199

Query: 76  RSHSAA 81
            +HS A
Sbjct: 200 EAHSMA 205



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S T+ + +     I +  IS G  H +A+S +G +++WG N   QLGL +  +   P L+
Sbjct: 178 STTAPQIVEHLAGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLI 237

Query: 62  LALSNKNIRQVSAGRSHSAAWTAPPL 87
            AL N+ +  ++ G SH+A  T   L
Sbjct: 238 EALDNQKVEFLACGGSHTALLTQDGL 263



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   +G+LG G    +   P+ V  L  + +  +S G  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGEAH 202

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++  G  +Y++G  E+G+LGL +T  K +P
Sbjct: 203 SMALSMSGN-IYSWGKNEFGQLGLDHTESKDSP 234



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 36/76 (47%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  N  +  ++ G  H   ++  G +F +G     QLG  +  N   P LV  L+   
Sbjct: 237 IEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNR 296

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 297 VTQIACGRWHTLAYVS 312


>gi|308799553|ref|XP_003074557.1| protein kinase, putative (ISS) [Ostreococcus tauri]
 gi|116000728|emb|CAL50408.1| protein kinase, putative (ISS) [Ostreococcus tauri]
          Length = 1813

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 3/84 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN--KVHVESVSCGLN 471
           IA G  H A + S G LYT+G+  +G+LGHG  ++   P +V  L+   + + SVSCG +
Sbjct: 511 IAAGESHVAAIASTGELYTWGSNTFGQLGHGDRVDRGKPTKVQILSDANIKIHSVSCGRS 570

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HTV ++D G+ V+ +G  EYG+LG
Sbjct: 571 HTVAVSDYGE-VFTWGSNEYGQLG 593



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR--QVSA 74
           IV I+ G  HV A+++TG+++ WG+N+  QLG G++++  +P  V  LS+ NI+   VS 
Sbjct: 508 IVFIAAGESHVAAIASTGELYTWGSNTFGQLGHGDRVDRGKPTKVQILSDANIKIHSVSC 567

Query: 75  GRSHSAA 81
           GRSH+ A
Sbjct: 568 GRSHTVA 574



 Score = 48.1 bits (113), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 19/93 (20%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL--------GN----------Q 52
            F+ +  VDI+ G  H LA++++G ++AWG+N + QLGL        GN          +
Sbjct: 368 GFRGVVTVDIASGEFHTLALTSSGDIWAWGSNIEGQLGLKPCEISKYGNGLGECRESAPE 427

Query: 53  INYRE-PQLVLALSNKNIRQVSAGRSHSAAWTA 84
           + Y + PQ+V   +N     ++AG  +S A TA
Sbjct: 428 MPYTDSPQIVAVGANVKFAAIAAGARYSMALTA 460



 Score = 42.0 bits (97), Expect = 0.84,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 23/35 (65%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG 48
           NI I  +S G  H +AVS+ G+VF WG+N   QLG
Sbjct: 559 NIKIHSVSCGRSHTVAVSDYGEVFTWGSNEYGQLG 593


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG+G T  + +P
Sbjct: 307 SAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSP 338



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+V AL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KRPEQVGALDAQNIVTVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + DKG+ VYA+G    G+LGL  T
Sbjct: 97  LALNDKGQ-VYAWGFAVDGQLGLSGT 121



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IA G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  +SCG +
Sbjct: 193 AQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGED 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 253 HTAALTKEG-GVFTFGAGGYGQLGHNSTAHEINPR 286



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++CG  H+  +   G +Y +G    G+LG  GT    +VP  + +L+ + +  V+CG  H
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           ++ ++ KG  V+++G  +YG+LGLG
Sbjct: 149 SLALS-KGSEVFSWGQNKYGQLGLG 172



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF+WG N   QLGLG +   +  PQ++ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS   T
Sbjct: 189 GIPFAQIAAGGAHSFVLT 206



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG   D QLGL     Y R P+ + +LS
Sbjct: 76  EQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYFHSLA 151



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I    I+ G  H   ++ +G VF WG N   QLGL ++ +   P L+ +L ++ 
Sbjct: 184 IKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +S G  H+AA T
Sbjct: 244 IVYISCGEDHTAALT 258



 Score = 45.1 bits (105), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV IS G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGNIVTQIACGRQHTSAFV 310



 Score = 45.1 bits (105), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++++G   YG+LG G     +  P+ + +L  +    ++ G  H
Sbjct: 142 VACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G AV+ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AVFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + + P+ V AL  
Sbjct: 26 RRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKRPEQVGALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVTVSCGEAHTLA 98



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P R        V+ V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  +P
Sbjct: 60  CNDLGQLGHEKSRKRP 75


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  V+CG  HT
Sbjct: 196 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 255

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 256 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 287



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  GT    +VP  + +L+ + +  VSCG 
Sbjct: 36  VAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGY 95

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ KG  V+++G  +YG+LGLG    K T PQ
Sbjct: 96  YHSLALS-KGSEVFSWGQNKYGQLGLGFEFKKQTSPQ 131



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG ++D QLGL G +   R P+ + +LS
Sbjct: 25  EQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLS 84

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QVS G  HS A
Sbjct: 85  DIQIVQVSCGYYHSLA 100



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV +S G  H LA+S   +VF+WG N   QLGLG +   +  PQL+ +L 
Sbjct: 78  RNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLL 137

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS   T
Sbjct: 138 GIPFMQIAAGGAHSFVLT 155



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 144 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 203

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 204 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 235



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + I+ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 128 TSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 187

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 188 LRSQKIVYICCGEDHTAALT 207



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 22/93 (23%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           ++CG+ HS  ++    ++++G   YG+LG G     +  P+ + +L  +    ++ G  H
Sbjct: 91  VSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAH 150

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 151 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 182



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 173 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 232

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + QV+ GR H++A+ 
Sbjct: 233 NPRKVFELMGSIVTQVACGRQHTSAFV 259



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%)

Query: 453 ERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           E+VVAL+  ++ +VSCG  HT+ + DKG+ VYA+G    G+LGL  T
Sbjct: 25  EQVVALDAQNIVAVSCGDAHTLALNDKGQ-VYAWGLDTDGQLGLPGT 70


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 51/93 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG   S  +T+ G ++T G G +G+LGHG+  N  VP +V  L    +  ++CG  HT
Sbjct: 257 ISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHT 316

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +        +Y FG G  G+LG+G  G   TPQ
Sbjct: 317 LAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQ 349



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLN 471
           IA G  H   +T+NG LY +G+  YG+LG GTT   KV  P  + +L  V +  ++CG N
Sbjct: 152 IASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSE-KVPMPTLIQSLAGVPIAFIACGGN 210

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H+  ++  G A++ +G   +G+LGL +   +  P
Sbjct: 211 HSFAVSKSG-AIFGWGKNTFGQLGLNDLNSRCYP 243



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 3/79 (3%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE--PQLVLAL 64
           + + + +N  I  IS GT H LA++N GQVF+WG+N+  QLG   + N R+  P+++ A+
Sbjct: 86  KRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAE-NGRQPTPRMIKAI 144

Query: 65  SNKNIRQVSAGRSHSAAWT 83
             K++ Q+++G+ H  A T
Sbjct: 145 GAKHVVQIASGQYHCLALT 163



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 3/99 (3%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVS 467
           Y    I+CG  HS  +T+ G ++++G+   G+LGH      +  P  + A+   HV  ++
Sbjct: 94  YIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIA 153

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK-PTP 505
            G  H + + + G+ +YA+G   YG+LG+G T  K P P
Sbjct: 154 SGQYHCLALTNNGE-LYAWGSNSYGQLGIGTTSEKVPMP 191



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 8/100 (8%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVP-----ERVVALNKVHVESVS 467
           + CG  H+  +T  G +Y  GN D+G+LGH   T+  K P     +R+ +L    +  +S
Sbjct: 41  VECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCIS 100

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGL-GNTGLKPTPQ 506
           CG  H++ + + G+ V+++G    G+LG     G +PTP+
Sbjct: 101 CGTAHSLALTNWGQ-VFSWGSNAVGQLGHDAENGRQPTPR 139



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R I A    H+V I+ G  H LA++N G+++AWG+NS  QLG+G        P L+ +L+
Sbjct: 139 RMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLA 198

Query: 66  NKNIRQVSAGRSHSAA 81
              I  ++ G +HS A
Sbjct: 199 GVPIAFIACGGNHSFA 214



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 22/203 (10%)

Query: 210 TVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAV 269
           T + I     R++     SDL+ P    K+K  GE A+DAGGV  +    +  ++L    
Sbjct: 717 TRENIVQDTIRELSHYAASDLKKPI---KIKFCGEEAEDAGGVRKEFFMLLLRDILD--- 770

Query: 270 PLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPL 329
                   G+  +    +      D  +S  S+  F  +GIL G+AI     + LP    
Sbjct: 771 -----PKYGMFKSFEESNAIWFTEDYFDSDDSM--FALIGILCGLAIYNFTIIALPFPLA 823

Query: 330 VWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGA-SWTGR 388
           ++K ++ E V   DL D     A+S+++I D         +  E+  L CF     + G 
Sbjct: 824 LYKKLLGEEVDMKDLRDLAPTVARSMQSILDYE-----GGDLEEVFDL-CFTTTRDYFGE 877

Query: 389 I--TPIVTGGQSVPLTFANRLQY 409
           +   P+   G+++ LT  N+ ++
Sbjct: 878 VQTIPLKPNGENIRLTQGNKQEF 900



 Score = 45.1 bits (105), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 3   GTSGRHIP------AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           GT+   +P      +   + I  I+ G  H  AVS +G +F WG N+  QLGL N +N R
Sbjct: 182 GTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL-NDLNSR 240

Query: 57  -EPQLVLALSNKNIRQVSAGRSHSAAWT 83
             P  +  L +  +R +S G   S   T
Sbjct: 241 CYPTQLRTLRSLGVRYISCGDDFSVFLT 268



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           IS G +  + ++N G VF  G  +  QLG G+  N   P+ V  L    I Q++ GR H+
Sbjct: 257 ISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHT 316

Query: 80  AAW 82
            A+
Sbjct: 317 LAF 319



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +Y +GN  +G LG G     +V  P ++       V  V CG +HT+ +  +GK +YA G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGK-MYACG 61

Query: 488 DGEYGKLG 495
           + ++G+LG
Sbjct: 62  NNDHGQLG 69



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQL-----VLALSNKNI 69
            +V +  GT H L ++  G+++A GNN   QLG   + +  + P++     + +L N  I
Sbjct: 37  EVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYII 96

Query: 70  RQVSAGRSHSAAWT 83
             +S G +HS A T
Sbjct: 97  TCISCGTAHSLALT 110


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G   +G LGHG  ++  VP+RV   L  +HV S+SCG 
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGP 427

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  +   G+ ++ FGDG +G LG G+      P+
Sbjct: 428 WHTALVTSAGQ-LFTFGDGSFGVLGHGDRASLSVPR 462



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA RL      I+CG +H+A+VT  G +Y++G    GRLGHG   +   P+ + +L 
Sbjct: 304 PLEFAVRLDVQN--ISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +GDG  ++G LG GN
Sbjct: 362 HMNIELVACGEYHTCAVTLSGD-LYTWGDGTFKFGLLGHGN 401



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+A+VTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 421 SSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVW 480

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGK-IFTWGDGDKGRLGHGDKDSRFVP 525



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V SV CG+N T
Sbjct: 591 ISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFT 650

Query: 474 VCIA 477
             I 
Sbjct: 651 AAIC 654



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+    +  +P RV   
Sbjct: 524 VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGK 582

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE +SCG  H   +  + + VY +G G  G+LG G T  K TP
Sbjct: 583 LHKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGGTDDKNTP 629



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG   +  VP  V AL + +
Sbjct: 476 ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPN 535

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG   TV +   G  VY  G   YG+LG
Sbjct: 536 FCQVACGHCLTVALTTSGH-VYTMGSAVYGQLG 567



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS G  H   V+  G++++WG  S  +LG G   +  +P+L+ +L++ NI  V+ 
Sbjct: 311 LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVAC 370

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 371 GEYHTCAVT 379



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 37/65 (56%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG G   +   P LV AL +K +R V  G 
Sbjct: 588 VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGI 647

Query: 77  SHSAA 81
           + +AA
Sbjct: 648 NFTAA 652



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 415 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVR 474

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 475 AACGVWHTAA 484



 Score = 38.1 bits (87), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 12/89 (13%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  V  + G  H  AV             ++G++F WG+    +LG G++ +
Sbjct: 462 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS 521

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWT 83
              P  V AL   N  QV+ G   + A T
Sbjct: 522 RFVPTCVAALVEPNFCQVACGHCLTVALT 550


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+ TS+G LYTFG+G +G LGHG       P+ V AL+      V+CG+ H
Sbjct: 367 SVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWH 426

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  I +           K +Y +GDG+  +LG G+   +  P+
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPK 469



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 382 GASWTGRI-TPIVTGGQSVPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYG 439
           G+S  G++  P   G Q  P    +RL       I+CG  H  V+TS   +YT+G G  G
Sbjct: 502 GSSSNGQLGNPKSDGKQ--PCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANG 559

Query: 440 RLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           RLGHG   + K P  V AL   HV+S+SCG N T CI 
Sbjct: 560 RLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCIC 597



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H A+ T  G ++T+G    GRLGHGT  +   P+ V +L+   V+ +SCG  HT
Sbjct: 261 IACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHT 320

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             +   G  ++ +GDG Y  G LG G
Sbjct: 321 CAVTTSGD-LFNWGDGSYNVGLLGCG 345



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  HSA +            +  LYT+G+GD  RLGHG      VP+ V AL + + 
Sbjct: 420 VACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNF 479

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             ++CG N TV +A  G+ V+  G    G+LG
Sbjct: 480 HQLACGHNMTVALATSGR-VFTMGSSSNGQLG 510



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 38/59 (64%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  + ++P LV AL +++++ +S G
Sbjct: 531 VEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCG 589



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-A 457
           VP      L+Y    +ACG   +  + ++G ++T G+   G+LG+  + + K P  V   
Sbjct: 467 VPKCVQALLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKS-DGKQPCLVQDR 525

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L    VE +SCG +H   +  + + VY +G G  G+LG G+   +  P
Sbjct: 526 LASELVEEISCGASHVTVLTSRSE-VYTWGMGANGRLGHGDLKDRKKP 572



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 35/69 (50%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ GT HV   +  G+VF WG     +LG G   +   P+LV +LS   +  +S 
Sbjct: 256 LDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISC 315

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 316 GEFHTCAVT 324


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 51/93 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG   S  +T+ G ++T G G +G+LGHG+  N  VP +V  L    +  ++CG  HT
Sbjct: 252 ISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHT 311

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +        +Y FG G  G+LG+G  G   TPQ
Sbjct: 312 LAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQ 344



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESVSCGLNH 472
           + CG  H+  +T  G +Y  GN D+G+LGH   T+  K P+R+ +L    +  +SCG  H
Sbjct: 41  VECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAH 100

Query: 473 TVCIADKGKAVYAFGDGEYGKLGL-GNTGLKPTPQ 506
           ++ + + G+ V+++G    G+LG     G +PTP+
Sbjct: 101 SLALTNWGQ-VFSWGSNAVGQLGHDAENGRQPTPR 134



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLN 471
           IA G  H   +T+NG LY +G+  YG+LG GTT   KV  P  + +L  V +  ++CG N
Sbjct: 147 IASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSE-KVPMPTLIQSLAGVPIAFIACGGN 205

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H+  ++  G A++ +G   +G+LGL +   +  P
Sbjct: 206 HSFAVSKSG-AIFGWGKNTFGQLGLNDLNSRCYP 238



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 3/79 (3%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE--PQLVLAL 64
           + + + +N  I  IS GT H LA++N GQVF+WG+N+  QLG   + N R+  P+++ A+
Sbjct: 81  QRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAE-NGRQPTPRMIKAI 139

Query: 65  SNKNIRQVSAGRSHSAAWT 83
             K++ Q+++G+ H  A T
Sbjct: 140 GAKHVVQIASGQYHCLALT 158



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 3/99 (3%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVS 467
           Y    I+CG  HS  +T+ G ++++G+   G+LGH      +  P  + A+   HV  ++
Sbjct: 89  YIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIA 148

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK-PTP 505
            G  H + + + G+ +YA+G   YG+LG+G T  K P P
Sbjct: 149 SGQYHCLALTNNGE-LYAWGSNSYGQLGIGTTSEKVPMP 186



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R I A    H+V I+ G  H LA++N G+++AWG+NS  QLG+G        P L+ +L+
Sbjct: 134 RMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLA 193

Query: 66  NKNIRQVSAGRSHSAA 81
              I  ++ G +HS A
Sbjct: 194 GVPIAFIACGGNHSFA 209



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 22/203 (10%)

Query: 210 TVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAV 269
           T + I     R++     SDL+ P    K+K  GE A+DAGGV  +    +  ++L    
Sbjct: 712 TRENIVQDTIRELSHYAASDLKKPI---KIKFCGEEAEDAGGVRKEFFMLLLRDILD--- 765

Query: 270 PLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPL 329
                   G+  +    +      D  +S  S+  F  +GIL G+AI     + LP    
Sbjct: 766 -----PKYGMFKSFEESNAIWFTEDYFDSDDSM--FALIGILCGLAIYNFTIIALPFPLA 818

Query: 330 VWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGA-SWTGR 388
           ++K ++ E V   DL D     A+S+++I D         +  E+  L CF     + G 
Sbjct: 819 LYKKLLGEEVDMKDLRDLAPTVARSMQSILDYE-----GGDLEEVFDL-CFTTTRDYFGE 872

Query: 389 I--TPIVTGGQSVPLTFANRLQY 409
           +   P+   G+++ LT  N+ ++
Sbjct: 873 VQTIPLKPNGENIRLTQGNKQEF 895



 Score = 45.1 bits (105), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLALSNKNIRQVSA 74
            +V +  GT H L ++  G+++A GNN   QLG   + +  + PQ + +L N  I  +S 
Sbjct: 37  EVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISC 96

Query: 75  GRSHSAAWT 83
           G +HS A T
Sbjct: 97  GTAHSLALT 105



 Score = 45.1 bits (105), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 3   GTSGRHIP------AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           GT+   +P      +   + I  I+ G  H  AVS +G +F WG N+  QLGL N +N R
Sbjct: 177 GTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL-NDLNSR 235

Query: 57  -EPQLVLALSNKNIRQVSAGRSHSAAWT 83
             P  +  L +  +R +S G   S   T
Sbjct: 236 CYPTQLRTLRSLGVRYISCGDDFSVFLT 263



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           IS G +  + ++N G VF  G  +  QLG G+  N   P+ V  L    I Q++ GR H+
Sbjct: 252 ISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHT 311

Query: 80  AAW 82
            A+
Sbjct: 312 LAF 314



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +Y +GN  +G LG G     +V  P ++       V  V CG +HT+ +  +GK +YA G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGK-MYACG 61

Query: 488 DGEYGKLG 495
           + ++G+LG
Sbjct: 62  NNDHGQLG 69


>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
          Length = 815

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRHGKLGLG 330



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG    +  N + P+ V  + +  ++ V+CG  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 5/95 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V   N V    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
             +   G+ +Y FG+ E GKLGL N   G   TPQ
Sbjct: 203 AFVTTDGE-LYVFGEPENGKLGLPNQLLGNHRTPQ 236



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVVFA 365



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ+  N+R PQLV  +  K I QV+ G  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGE 253

Query: 78  HSAAWT 83
           H+   T
Sbjct: 254 HTVVLT 259



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V  + N 
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGNP 191

Query: 68  NIRQVSAGRSHSAAWT 83
            +  +S G  HSA  T
Sbjct: 192 -VSWISCGYYHSAFVT 206



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL--SN 66
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+    R    V++   S 
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGD-TEERNTFHVISFFTSE 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAALT 156


>gi|22795248|gb|AAN08220.1| putative chromosome condensation regulator [Oryza sativa Japonica
           Group]
 gi|108709680|gb|ABF97475.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 505

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 4/87 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK---VPERVVALNKVHVESVSCGL 470
           ++CG  H+A ++ NG +YT+G G  G+LGH +  +     +P RVVAL++  +  VSCG 
Sbjct: 257 VSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGG 316

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H+  + + G A+YA+G G  G+LGLG
Sbjct: 317 VHSCAVTEDG-ALYAWGGGHVGQLGLG 342



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 44/65 (67%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A V S+G LYT+G  D+G+LG GT  + K P++V AL    V+SVSCG + T
Sbjct: 65  VACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSVSCGAHCT 124

Query: 474 VCIAD 478
             +A+
Sbjct: 125 AAVAE 129



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           KN+  +D++ G  H  AV++ G ++ WG N   QLG G + + +EPQ V AL  + ++ V
Sbjct: 58  KNLRWIDVACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSV 117

Query: 73  SAGRSHSAAWTAPP 86
           S G +H  A  A P
Sbjct: 118 SCG-AHCTAAVAEP 130



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV---------ALNKVHVE 464
           ++CG  H   ++ +G L  +G  +YG+LG G T       RV+         A   V + 
Sbjct: 196 VSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPELVKIV 255

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            VSCG  HT  I++ G+ VY +G G  G+LG
Sbjct: 256 RVSCGEYHTAAISENGE-VYTWGLGSMGQLG 285



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYRE--PQLVLALSNKNIRQ 71
           + IV +S G  H  A+S  G+V+ WG  S  QLG  + Q   +E  P+ V+AL    IR 
Sbjct: 252 VKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRD 311

Query: 72  VSAGRSHSAAWT 83
           VS G  HS A T
Sbjct: 312 VSCGGVHSCAVT 323



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 25/49 (51%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY 55
           R + A     I D+S G  H  AV+  G ++AWG     QLGLG Q  +
Sbjct: 299 RRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGF 347


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+GNG  ++G LGHG  ++  +P+R+   L  +HV S+SCG 
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGP 427

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 428 WHTAVVTSAGQ-LFTFGDGSFGVLGHGD 454



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+AVVTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 421 SSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVW 480

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 481 HTAAVVEVMVGNSSTSNCSSGK-IFTWGDGDKGRLGHGDKDTRLVP 525



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA RL      I+CG +H+ +VT  G +Y++G    GRLGHG   +   P+ V AL 
Sbjct: 304 PLEFAGRLDVQN--ISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEALA 361

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +G+G   +G LG GN
Sbjct: 362 HMNIELVACGEYHTCAVTLSGD-LYTWGNGTFNFGLLGHGN 401



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 16/167 (9%)

Query: 353 QSLRAIRDI-------HLSGVTEANFPEIIPLECFEGASWT------GRITPIVTGGQSV 399
           +SL+ +R +       H + V E          C  G  +T      GR+       + V
Sbjct: 465 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLV 524

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-L 458
           P   A+ ++     +ACG   +  +T++G++YT G+  YG+LG+    +  VP RV   L
Sbjct: 525 PTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKL 583

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +K  VE +SCG  H   +  + + VY +G G  G+LG G+T  + +P
Sbjct: 584 HKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRNSP 629



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 14/128 (10%)

Query: 363 LSGVTEANFPEIIPLECFE------------GASWTGRITPIVTGGQSVPLTFANRL-QY 409
           ++ + E NF ++    CF             G+S  G++      G  VP     +L + 
Sbjct: 528 VASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGM-VPARVEGKLHKN 586

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           +   I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V SV CG
Sbjct: 587 FVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCG 646

Query: 470 LNHTVCIA 477
           +N T  I 
Sbjct: 647 INFTAAIC 654



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS G  H   V+  G+V++WG  S  +LG G   +  +P+LV AL++ NI  V+ 
Sbjct: 311 LDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVAC 370

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 371 GEYHTCAVT 379



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K +R V  G 
Sbjct: 588 VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGI 647

Query: 77  SHSAA 81
           + +AA
Sbjct: 648 NFTAA 652



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 23/116 (19%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  V  + G  H  AV             ++G++F WG+    +LG G++  
Sbjct: 462 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDT 521

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGH--TPSSSL--RLGLPQ 106
              P  V +L   N  QV+ G   + A T       T GH  T  SS+  +LG PQ
Sbjct: 522 RLVPTCVASLVEPNFCQVACGHCFTVALT-------TSGHVYTMGSSVYGQLGNPQ 570



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 415 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVR 474

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 475 AACGVWHTAA 484


>gi|297305171|ref|XP_001103994.2| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like,
           partial [Macaca mulatta]
          Length = 744

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-VESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +      +V+   + H +  +SCG NH
Sbjct: 83  VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDHTISYISCGENH 141

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 142 TALITDIG-LMYTFGDGRHGKLGLG 165



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           ++CG +H+A+VT++G LY FG  + G+LG    +  N + P+ V  + +  ++ V+CG  
Sbjct: 30  LSCGDEHTAIVTTDGELYMFGEPENGKLGLPNQLLSNHRTPQLVSEIPEKVIQ-VACGGE 88

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 89  HTVVLTE--NAVYTFGLGQFGQLGLG 112



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 3/74 (4%)

Query: 12 FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNI 69
          FKN   V +S G EH   V+  G+++ +G   + +LGL NQ+  N+R PQLV  +  K I
Sbjct: 22 FKNDVPVHLSCGDEHTAIVTTDGELYMFGEPENGKLGLPNQLLSNHRTPQLVSEIPEKVI 81

Query: 70 RQVSAGRSHSAAWT 83
           QV+ G  H+   T
Sbjct: 82 -QVACGGEHTVVLT 94



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERV 455
           S P    N   +  + I+CG  H+A++T  G +YTFG+G +G+LG G     N   P   
Sbjct: 119 SEPKVIENIRDHTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFTPTLC 178

Query: 456 VALNKVHVESVSCGLNHTVCIA 477
               +  V+ V+CG  H V  A
Sbjct: 179 SNFLRFIVKLVACGGCHMVVFA 200


>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
           sapiens]
 gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
 gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
 gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
          Length = 815

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRHGKLGLG 330



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG    +  N + P+ V  + +  ++ V+CG  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     V    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
             +   G+ +Y FG+ E GKLGL N   G   TPQ
Sbjct: 203 AFVTTDGE-LYVFGEPENGKLGLPNQLLGNHRTPQ 236



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVVFA 365



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWT 83
            +  +S G  HSA  T
Sbjct: 191 PVSWISCGYYHSAFVT 206



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ+  N+R PQLV  +  K I QV+ G  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGE 253

Query: 78  HSAAWT 83
           H+   T
Sbjct: 254 HTVVLT 259



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL--SN 66
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+    R    V++   S 
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGD-TEERNTFHVISFFTSE 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAALT 156


>gi|242038901|ref|XP_002466845.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
 gi|241920699|gb|EER93843.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
          Length = 485

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 4/90 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM---NWKVPERVVALNKVHVESVSCGL 470
           ++CG  H+A ++ NG +YT+G G  G+LGH +     N  +P R+VAL+ + V  VSCG 
Sbjct: 232 VSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRIVALDGIVVRDVSCGG 291

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
            H+  + + G A+YA+G G  G+LG+G  G
Sbjct: 292 VHSCAVTESG-ALYAWGGGHVGQLGVGPQG 320



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 45/65 (69%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A V S+G L+T+G  ++G+LG GT  + K P++V +L    V+SVSCG + T
Sbjct: 65  IACGREHTAAVASDGSLFTWGANEFGQLGDGTEESAKEPKKVKSLETEFVKSVSCGAHCT 124

Query: 474 VCIAD 478
             +A+
Sbjct: 125 AAVAE 129



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           K++   DI+ G EH  AV++ G +F WG N   QLG G + + +EP+ V +L  + ++ V
Sbjct: 58  KSLRWTDIACGREHTAAVASDGSLFTWGANEFGQLGDGTEESAKEPKKVKSLETEFVKSV 117

Query: 73  SAGRSHSAAWTAPP 86
           S G +H  A  A P
Sbjct: 118 SCG-AHCTAAVAEP 130



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG---LGNQINYREPQLVLALSNKNI 69
           + + IV +S G  H  A+S  G+V+ WG  S  QLG   L +  N   P+ ++AL    +
Sbjct: 225 EQVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRIVALDGIVV 284

Query: 70  RQVSAGRSHSAAWT 83
           R VS G  HS A T
Sbjct: 285 RDVSCGGVHSCAVT 298



 Score = 45.8 bits (107), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVVTSNGYLYTFGN-GDYGRLGHGTTMNWKVPERVV---------ALNKVHV 463
           ++CG  H   ++ +G L  +G+  +YG+LG G T       RV+         A  +V +
Sbjct: 170 VSCGAVHVMALSEDGLLQAWGSYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQVKI 229

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             VSCG  HT  I++ G+ VY +G G  G+LG
Sbjct: 230 VRVSCGEYHTAAISENGE-VYTWGLGSMGQLG 260



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 27/49 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY 55
           R I A   I + D+S G  H  AV+ +G ++AWG     QLG+G Q  +
Sbjct: 274 RRIVALDGIVVRDVSCGGVHSCAVTESGALYAWGGGHVGQLGVGPQGGF 322


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 11/103 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IACG  HSA+ TSNG L+TFG+G +G LGHG   +   P+ V  L+ +    V+CG+ H
Sbjct: 376 SIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVACGVWH 435

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLG--NTGLKPT 504
           T  I +           + ++ +GDG+  +LG G  +T L PT
Sbjct: 436 TAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPT 478



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG  H AV+TS   LYT+G G  GRLGHG T + + P  V AL   HV+++SCG N T
Sbjct: 543 VSCGAHHVAVLTSRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFT 602

Query: 474 --VCI 476
             +CI
Sbjct: 603 TSICI 607



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT++G LYT+G+G  + G LG GT ++  +P+RV   L  + V S++CG 
Sbjct: 322 VACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGT 381

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK ++ FGDG +G LG G+
Sbjct: 382 WHSALATSNGK-LFTFGDGAFGVLGHGD 408



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H A+VT  G ++T+G    GRLGHG   ++  P  V  L   +V+ V+CG  HT
Sbjct: 270 IACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGEYHT 329

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLG 497
             +   G  +Y +GDG    G LG G
Sbjct: 330 CAVTTSGD-LYTWGDGTRNAGLLGQG 354



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-A 457
           +P   ++ + Y    IACG   +  +T++G+++T G   +G+LG+  + + K+P  V  +
Sbjct: 476 LPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTMGGTAHGQLGNPAS-DGKMPTLVQDS 534

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L    VE VSCG +H   +  + + +Y +G G  G+LG G+T  + TP
Sbjct: 535 LVGEFVEEVSCGAHHVAVLTSRSE-LYTWGKGANGRLGHGDTEDRRTP 581



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 15/114 (13%)

Query: 396 GQSVPLTFANRLQYYEA----AIACGFKHSAVVT----------SNGYLYTFGNGDYGRL 441
           G    L+F   +Q         +ACG  H+A +           S+  L+T+G+GD  RL
Sbjct: 407 GDRESLSFPKEVQLLSGLKTIKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRL 466

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           GHG+   + +P  V +L   +   ++CG   TV +   G  V+  G   +G+LG
Sbjct: 467 GHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTTSGH-VFTMGGTAHGQLG 519



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G  HV  V+  G+VF WG  S  +LG G + ++  P+LV  L+  N+  V+ 
Sbjct: 265 LDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVAC 324

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 325 GEYHTCAVT 333



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 37/59 (62%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           + ++S G  HV  +++  +++ WG  ++ +LG G+  + R P LV AL +++++ +S G
Sbjct: 540 VEEVSCGAHHVAVLTSRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCG 598


>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Glycine max]
          Length = 474

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 5/94 (5%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK---VPERVVALNKVHVESVSC 468
           A ++CG  H+AV++  G +YT+G G+ G+LGH +        +P RVV L+ + ++ V+C
Sbjct: 229 AKVSCGEYHTAVISDKGEVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVAC 288

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLG-NTGL 501
           G  HT C   +G A+YA+G G  G+LGLG  TGL
Sbjct: 289 GGVHT-CSVTQGGALYAWGGGRSGQLGLGPQTGL 321



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 45/65 (69%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG +H+A + S+G L+T+G  D+G+LG GT    K+PE+V  L    V+SVSCG + +
Sbjct: 65  VACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKLPEKVKQLESEFVKSVSCGAHCS 124

Query: 474 VCIAD 478
            CIA+
Sbjct: 125 ACIAE 129



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            PA  N   +D++ G EH  A+++ G +F WG N   QLG G +   + P+ V  L ++ 
Sbjct: 54  CPAGTNARWLDVACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKLPEKVKQLESEF 113

Query: 69  IRQVSAGRSHSAAWTAPP 86
           ++ VS G +H +A  A P
Sbjct: 114 VKSVSCG-AHCSACIAEP 130



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 10/91 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV---------ALNKVHVE 464
           ++CG  H   ++  G L  +G  +YG+LG G T        ++         A   V + 
Sbjct: 170 VSCGAVHVVALSEEGLLQAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELVKIA 229

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            VSCG  HT  I+DKG+ VY +G G  G+LG
Sbjct: 230 KVSCGEYHTAVISDKGE-VYTWGLGNMGQLG 259



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 16/86 (18%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG------------NQIN 54
           R +     I I D++ G  H  +V+  G ++AWG     QLGLG            +Q  
Sbjct: 273 RRVVTLDGIFIKDVACGGVHTCSVTQGGALYAWGGGRSGQLGLGPQTGLFSCVANDSQTF 332

Query: 55  YRE-PQLVLALSNKNIRQVSAGRSHS 79
           +R  P LV+    K ++ V+ G SH+
Sbjct: 333 FRNIPVLVVP---KGVQLVACGYSHT 355



 Score = 38.5 bits (88), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 17/93 (18%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-------------TTMNWKVPERVVALNK 460
           +ACG  H+  VT  G LY +G G  G+LG G              T    +P  VV    
Sbjct: 286 VACGGVHTCSVTQGGALYAWGGGRSGQLGLGPQTGLFSCVANDSQTFFRNIPVLVVPKG- 344

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGK 493
             V+ V+CG +HT+     G+ ++ +G   YG+
Sbjct: 345 --VQLVACGYSHTLISMSDGR-IHGWGYNNYGQ 374


>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
           leucogenys]
          Length = 814

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG +H
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSDPKVIENIRDQTISYISCGESH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRHGKLGLG 330



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG    +  N + P+ V  + +  ++ V+CG  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     V    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
             +   G+ +Y FG+ E GKLGL N   G   TPQ
Sbjct: 203 AFVTTDGE-LYVFGEPENGKLGLPNQLLGNHRTPQ 236



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P      ++  V+ V+CG  
Sbjct: 300 ISCGESHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVVFA 365



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWT 83
            +  +S G  HSA  T
Sbjct: 191 PVSWISCGYYHSAFVT 206



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ+  N+R PQLV  +  K I QV+ G  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGE 253

Query: 78  HSAAWT 83
           H+   T
Sbjct: 254 HTVVLT 259



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL--SN 66
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+    R    V++   S 
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGD-TEERNTFHVISFFTSE 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAALT 156


>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 388

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           Y     A G+ HS  V+ +G L+T GNG +G+LGHG  M+ + P +V   +   V+ V+C
Sbjct: 100 YVITQAAAGWSHSGFVSDSGCLFTCGNGSFGQLGHGDNMSLRTPAKVSYFSNESVKMVAC 159

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           G+ H++ +   G  V  FG G+ G+LG  + G K
Sbjct: 160 GMRHSLVLL-AGNQVCGFGSGKRGQLGFTSDGTK 192



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H   +TS+G ++T+G G  G+LGHG  +N  +P+ V   +   +   + G +H+
Sbjct: 53  LACGGAHVIALTSDGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDGYVITQAAAGWSHS 112

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             ++D G  ++  G+G +G+LG G+     TP
Sbjct: 113 GFVSDSG-CLFTCGNGSFGQLGHGDNMSLRTP 143



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 36/61 (59%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G  HV+A+++ G+VF WG  S  QLG G+ +N   P+LV       I Q +AG SHS
Sbjct: 53  LACGGAHVIALTSDGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDGYVITQAAAGWSHS 112

Query: 80  A 80
            
Sbjct: 113 G 113



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV----LAL 64
           +  F  + ++ I+ G EH  AV+  G+V  WG     QLGLGN  +   PQLV    + L
Sbjct: 299 VSDFDGVKVLQIAAGAEHSAAVTENGKVKTWGWGEHGQLGLGNTNDQTSPQLVSVGSIDL 358

Query: 65  SNKNIR 70
             K I+
Sbjct: 359 RTKEIK 364



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +  F    I   + G  H   VS++G +F  GN S  QLG G+ ++ R P  V   SN++
Sbjct: 94  VSFFDGYVITQAAAGWSHSGFVSDSGCLFTCGNGSFGQLGHGDNMSLRTPAKVSYFSNES 153

Query: 69  IRQVSAGRSHS 79
           ++ V+ G  HS
Sbjct: 154 VKMVACGMRHS 164



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 26/107 (24%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER--------------VVALN 459
           +A G+ H+ ++T +G ++  GN          T+N K PE+              V   +
Sbjct: 255 VAVGWNHALLLTVDGEVFKLGN----------TLN-KQPEKQQLQIDSSEALLAKVSDFD 303

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            V V  ++ G  H+  + + GK V  +G GE+G+LGLGNT  + +PQ
Sbjct: 304 GVKVLQIAAGAEHSAAVTENGK-VKTWGWGEHGQLGLGNTNDQTSPQ 349



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES----VSCG 469
           IA G +HSA VT NG + T+G G++G+LG G T +   P+ +V++  + + +    V CG
Sbjct: 310 IAAGAEHSAAVTENGKVKTWGWGEHGQLGLGNTNDQTSPQ-LVSVGSIDLRTKEIKVYCG 368

Query: 470 LNHTVCIADK 479
              T  +  K
Sbjct: 369 SGFTYAVRRK 378


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 1/88 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +  G  H A+++ +G L+T+G G YGRLGHG   +   P++VVAL  + ++ V CG   T
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 474 VCIAD-KGKAVYAFGDGEYGKLGLGNTG 500
           + ++   G  +Y +G+ E+G+LG G+ G
Sbjct: 194 IALSHTAGSGLYTWGNNEFGQLGRGDCG 221



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 5/102 (4%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           +SV +  A RL     A+  G   +AV+ S+G L+T+G GD+GRLGHG T N   P  V 
Sbjct: 229 ESVAVPGAKRL----VALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVS 284

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           +L    V +V+ G  H++ +   G+ ++++G GE G+LG G+
Sbjct: 285 SLYGHVVVAVALGGGHSLALTKAGE-LFSWGRGENGQLGHGS 325



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN--WKVPERVVALNKVHVESVSCGLN 471
           I+ G  HS     +G +Y +G  DYG LG G + +    +P+R++    +  +++SCG  
Sbjct: 348 ISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQ 407

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HTV +      +Y++G G  G+LG  N   +  P
Sbjct: 408 HTVALTSDN-TIYSWGCGLGGRLGTFNEKNQCAP 440



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 3/89 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGL 470
           A+A G  HS  +T  G L+++G G+ G+LGHG+  + ++  + +   ++   +  +S G 
Sbjct: 293 AVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGG 352

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            H+V   D G +VYA+G  +YG LG G++
Sbjct: 353 YHSVAQLDDG-SVYAWGMSDYGILGTGDS 380



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 6/77 (7%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I+ ++ G  H+  +S +G++F WG     +LG G++ +   P+ V+AL+N  ++ V  G 
Sbjct: 131 IILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGG 190

Query: 77  SHSAAWTAPPLPPHTPG 93
             + A +      HT G
Sbjct: 191 RSTIALS------HTAG 201


>gi|74217026|dbj|BAE26617.1| unnamed protein product [Mus musculus]
          Length = 857

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  V+CG  HT
Sbjct: 55  ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 114

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 115 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 146



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 3   VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 62

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 63  AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 94



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 36/66 (54%)

Query: 18 VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
          + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L ++ I  +  G  
Sbjct: 1  MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGED 60

Query: 78 HSAAWT 83
          H+AA T
Sbjct: 61 HTAALT 66



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 32  LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 91

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + QV+ GR H++A+ 
Sbjct: 92  NPRKVFELMGSIVTQVACGRQHTSAFV 118


>gi|222625331|gb|EEE59463.1| hypothetical protein OsJ_11655 [Oryza sativa Japonica Group]
          Length = 581

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 4/87 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK---VPERVVALNKVHVESVSCGL 470
           ++CG  H+A ++ NG +YT+G G  G+LGH +  +     +P RVVAL++  +  VSCG 
Sbjct: 333 VSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGG 392

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H+  + + G A+YA+G G  G+LGLG
Sbjct: 393 VHSCAVTEDG-ALYAWGGGHVGQLGLG 418



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 44/65 (67%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A V S+G LYT+G  D+G+LG GT  + K P++V AL    V+SVSCG + T
Sbjct: 141 VACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSVSCGAHCT 200

Query: 474 VCIAD 478
             +A+
Sbjct: 201 AAVAE 205



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           KN+  +D++ G  H  AV++ G ++ WG N   QLG G + + +EPQ V AL  + ++ V
Sbjct: 134 KNLRWIDVACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSV 193

Query: 73  SAGRSHSAAWTAPP 86
           S G +H  A  A P
Sbjct: 194 SCG-AHCTAAVAEP 206



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV---------ALNKVHVE 464
           ++CG  H   ++ +G L  +G  +YG+LG G T       RV+         A   V + 
Sbjct: 272 VSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPELVKIV 331

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            VSCG  HT  I++ G+ VY +G G  G+LG
Sbjct: 332 RVSCGEYHTAAISENGE-VYTWGLGSMGQLG 361



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYRE--PQLVLALSNKNIRQ 71
           + IV +S G  H  A+S  G+V+ WG  S  QLG  + Q   +E  P+ V+AL    IR 
Sbjct: 328 VKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRD 387

Query: 72  VSAGRSHSAA 81
           VS G  HS A
Sbjct: 388 VSCGGVHSCA 397



 Score = 39.3 bits (90), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 25/49 (51%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY 55
           R + A     I D+S G  H  AV+  G ++AWG     QLGLG Q  +
Sbjct: 375 RRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGF 423


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+ TS+G LYTFG+G +G LGHG       P+ V AL+      V+CG+ H
Sbjct: 367 SVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWH 426

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  I +           K +Y +GDG+  +LG G+   +  P+
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPK 469



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 39/64 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H  V+TS   +YT+G G  GRLGHG   + K P  V AL   HV+S+SCG N T
Sbjct: 534 ISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFT 593

Query: 474 VCIA 477
            CI 
Sbjct: 594 TCIC 597



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H A+ T  G ++T+G    GRLGHGT  +   P+ V +L+   V+ +SCG  HT
Sbjct: 261 IACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHT 320

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             +   G  ++ +GDG Y  G LG G
Sbjct: 321 CAVTTSGD-LFNWGDGSYNVGLLGCG 345



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  HSA +            +  LYT+G+GD  RLGHG      VP+ V AL +   
Sbjct: 420 VACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDF 479

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             ++CG N TV +A  G+ V+  G    G+LG
Sbjct: 480 HQLACGHNMTVALATSGR-VFTMGSSSNGQLG 510



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 38/59 (64%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  + ++P LV AL +++++ +S G
Sbjct: 531 VEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCG 589



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 35/69 (50%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ GT HV   +  G+VF WG     +LG G   +   P+LV +LS   +  +S 
Sbjct: 256 LDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISC 315

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 316 GEFHTCAVT 324



 Score = 45.8 bits (107), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-A 457
           VP      L+Y    +ACG   +  + ++G ++T G+   G+LG+  + + K P  V   
Sbjct: 467 VPKCVQALLEYDFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKS-DGKQPCLVQDR 525

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L    VE +SCG +H   +  + + VY +G G  G+LG G+   +  P
Sbjct: 526 LASELVEEISCGASHVTVLTSRSE-VYTWGMGANGRLGHGDLKDRKKP 572


>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
          Length = 815

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRHGKLGLG 330



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG    +  N + P+ V  + +  ++ V+CG  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     V    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
             +   G+ +Y FG+ E GKLGL N   G   TPQ
Sbjct: 203 AFVTTDGE-LYVFGEPENGKLGLPNQLLGNHRTPQ 236



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVVFA 365



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWT 83
            +  +S G  HSA  T
Sbjct: 191 PVSWISCGYYHSAFVT 206



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ+  N+R PQLV  +  K I QV+ G  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGE 253

Query: 78  HSAAWT 83
           H+   T
Sbjct: 254 HTVVLT 259



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL--SN 66
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+    R    V++   S 
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGD-TEERNTFHVISFFTSE 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAALT 156


>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 992

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 65/124 (52%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G++  G++    T  + VP    +       +I+CG +H+A ++  G ++TFG+G +G+L
Sbjct: 193 GSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQL 252

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGL 501
           GH +  +   P  +  L    V  V+CG +HT+   +  K +Y+FG G  G+LG G    
Sbjct: 253 GHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVK 312

Query: 502 KPTP 505
           +  P
Sbjct: 313 QSVP 316



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVL 62
           T  R + + +N  ++ I+ G +H +A+SN GQ+F WG N+  QLGL   Q   + PQ + 
Sbjct: 104 TVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQ 163

Query: 63  ALSNKNIRQVSAGRSHS 79
           +L    + Q+SAG +HS
Sbjct: 164 SLCEIPVAQISAGGNHS 180



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS V++ +G ++ +G+   G+LG G T +  VP  V +L      S+SCG  
Sbjct: 171 AQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGE 230

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  ++ KG  V+ FG G +G+LG
Sbjct: 231 HTATLS-KGGTVFTFGSGGFGQLG 253



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           IACG +HS  ++++G L+ +G   +G+LG        + P+ + +L ++ V  +S G NH
Sbjct: 120 IACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNH 179

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G  V+ +G    G+LGLG+T  +  P
Sbjct: 180 SFVLSLSG-VVFGWGSNSAGQLGLGDTKDRFVP 211



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%)

Query: 5   SGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           S +H+ +   I +  IS G  H   +S +G VF WG+NS  QLGLG+  +   P +V +L
Sbjct: 158 SPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSL 217

Query: 65  SNKNIRQVSAGRSHSAA 81
             K    +S G  H+A 
Sbjct: 218 CGKKTVSISCGGEHTAT 234



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 33/65 (50%)

Query: 18  VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRS 77
           V IS G EH   +S  G VF +G+    QLG  +  +   P+L+  L    + QV+ GR 
Sbjct: 223 VSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRH 282

Query: 78  HSAAW 82
           H+  +
Sbjct: 283 HTLVF 287


>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
           paniscus]
          Length = 815

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRHGKLGLG 330



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG    +  N + P+ V  + +  ++ V+CG  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     V    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
             +   G+ +Y FG+ E GKLGL N   G   TPQ
Sbjct: 203 AFVTTDGE-LYVFGEPENGKLGLPNQLLGNHRTPQ 236



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVIFA 365



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWT 83
            +  +S G  HSA  T
Sbjct: 191 PVSWISCGYYHSAFVT 206



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ+  N+R PQLV  +  K I QV+ G  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGE 253

Query: 78  HSAAWT 83
           H+   T
Sbjct: 254 HTVVLT 259



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL--SN 66
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+    R    V++   S 
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGD-TEERNTFHVISFFTSE 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAALT 156


>gi|218193272|gb|EEC75699.1| hypothetical protein OsI_12517 [Oryza sativa Indica Group]
          Length = 555

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 4/87 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK---VPERVVALNKVHVESVSCGL 470
           ++CG  H+A ++ NG +YT+G G  G+LGH +  +     +P RVVAL++  +  VSCG 
Sbjct: 307 VSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGG 366

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H+  + + G A+YA+G G  G+LGLG
Sbjct: 367 VHSCAVTEDG-ALYAWGGGHVGQLGLG 392



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 44/65 (67%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A V S+G LYT+G  D+G+LG GT  + K P++V AL    V+SVSCG + T
Sbjct: 141 VACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSVSCGAHCT 200

Query: 474 VCIAD 478
             +A+
Sbjct: 201 AAVAE 205



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQV 72
           KN+  +D++ G  H  AV++ G ++ WG N   QLG G + + +EPQ V AL  + ++ V
Sbjct: 134 KNLRWIDVACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSV 193

Query: 73  SAGRSHSAAWTAPP 86
           S G +H  A  A P
Sbjct: 194 SCG-AHCTAAVAEP 206



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV---------ALNKVHVE 464
           ++CG  H   ++ +G L  +G  +YG+LG G T       RV+         A   V + 
Sbjct: 246 VSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPELVKIV 305

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            VSCG  HT  I++ G+ VY +G G  G+LG
Sbjct: 306 RVSCGEYHTAAISENGE-VYTWGLGSMGQLG 335



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYRE--PQLVLALSNKNIRQ 71
           + IV +S G  H  A+S  G+V+ WG  S  QLG  + Q   +E  P+ V+AL    IR 
Sbjct: 302 VKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRD 361

Query: 72  VSAGRSHSAA 81
           VS G  HS A
Sbjct: 362 VSCGGVHSCA 371



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 25/49 (51%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY 55
           R + A     I D+S G  H  AV+  G ++AWG     QLGLG Q  +
Sbjct: 349 RRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGF 397


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V+ +G LYT+G   YG+LGHG   +  VP +V AL    +  +S G  HT
Sbjct: 227 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHT 286

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +  +GK +Y +G  ++G++G+GN     +P
Sbjct: 287 MALTSEGK-LYGWGWNKFGQVGVGNNDDHSSP 317



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 5/98 (5%)

Query: 405 NRLQYYEAA----IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
            ++Q +E+     IA G +H+A VT +G LY +G G YG LG G   +  +PE+V ++  
Sbjct: 162 QKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEG 221

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +  V+CG  HT+ ++D G  +Y +G  +YG+LG G+
Sbjct: 222 EKMVLVACGWRHTITVSDSGN-LYTYGWSKYGQLGHGD 258



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   VT  G + ++G    G+LG GTT +  +P+++ A   V V+ ++ G  HT
Sbjct: 123 IACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHT 182

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + + G  +Y +G G YG LGLG+   +  P+
Sbjct: 183 AAVTEDGD-LYGWGWGRYGNLGLGDRNDRLLPE 214



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 52/93 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G  HS  + +   L ++G G+ G+LGHG   +  VP  +   +   + SV CG +HT
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              ++    VY++G G++G+LG GN+    TPQ
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQ 110



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 11/120 (9%)

Query: 388 RITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTT 446
           R+ P V  G   P            ++ CG  H+   + +   +Y++G GD+GRLGHG +
Sbjct: 53  RLVPTVLSGFDAPAI---------TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS 103

Query: 447 MNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +   P+ V AL  + ++ ++CG +H + +   G+ V ++G  + G+LGLG T     PQ
Sbjct: 104 SDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGE-VQSWGRNQNGQLGLGTTEDSLLPQ 162



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + + I  I+ G  H LAV+  G+V +WG N + QLGLG   +   PQ + A  +  
Sbjct: 112 VKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVC 171

Query: 69  IRQVSAGRSHSAA 81
           ++ ++AG  H+AA
Sbjct: 172 VKMIAAGAEHTAA 184



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I AF+++ +  I+ G EH  AV+  G ++ WG      LGLG++ +   P+ V ++  
Sbjct: 162 QKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEG 221

Query: 67  KNIRQVSAGRSHS 79
           + +  V+ G  H+
Sbjct: 222 EKMVLVACGWRHT 234



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 2/100 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTG-QVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           +  F    I  +  G +H  A S    QV++WG     +LG GN  +   PQ V AL   
Sbjct: 59  LSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL 118

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
            I+Q++ G SH  A T       + G   +  L LG  +D
Sbjct: 119 KIKQIACGDSHCLAVTMAG-EVQSWGRNQNGQLGLGTTED 157



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 42/76 (55%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + +   +V ++ G  H + VS++G ++ +G +   QLG G+  ++  P  V AL +  
Sbjct: 216 VSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDST 275

Query: 69  IRQVSAGRSHSAAWTA 84
           I Q+S G  H+ A T+
Sbjct: 276 ISQISGGWRHTMALTS 291



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 38/72 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K+  I  IS G  H +A+++ G+++ WG N   Q+G+GN  ++  P  V    ++N
Sbjct: 268 VEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPGSEN 327

Query: 69  IRQVSAGRSHSA 80
           +       +HS 
Sbjct: 328 LPGCMRMEAHSG 339


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 14/107 (13%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H+AVVTS G L+TFG+G +G LGHG  +    P  V  L  +    V+CG+ HT
Sbjct: 402 ISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHT 461

Query: 474 VC-------IADKG-------KAVYAFGDGEYGKLGLGNTGLKPTPQ 506
                    ++D G       + +Y +GDG+ G+LG G+   +  P+
Sbjct: 462 AAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPE 508



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G  +YG LGHG+ ++  +P++V   +  + V  +SCG 
Sbjct: 347 VACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGA 406

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 407 WHTAVVTSAGQ-LFTFGDGSFGALGHGD 433



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+ +VT  G ++++G    GRLGHG   +   P+ +  L+  +VE V+CG  HT
Sbjct: 295 IACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHT 354

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLGNTGLKPTPQ 506
             +   G  +Y +GDG   YG LG G+      PQ
Sbjct: 355 CAVTLSGD-LYTWGDGTHNYGLLGHGSEVSHWIPQ 388



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 16/97 (16%)

Query: 414 IACGFKHSAVVT---------------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +ACG  H+A                  S+  LYT+G+GD GRLGHG      VPE V AL
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            +  +  V+CG + TV +   G+ VY  G   YG+LG
Sbjct: 514 IEERICQVACGNDLTVALTTAGR-VYTMGSTAYGQLG 549



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T+ G +YT G+  YG+LG   T N K+P  V   
Sbjct: 506 VPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLG-SATANGKLPTCVEGE 564

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +    VE V+CG  H   +  K + VY +G G  G+LG G+   + TP
Sbjct: 565 IANSFVEEVACGSYHVAVLTSKNE-VYTWGKGLNGQLGHGDNNHRNTP 611



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 36/64 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H AV+TS   +YT+G G  G+LGHG   +   P  V  L    V++V+CG   T
Sbjct: 573 VACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFT 632

Query: 474 VCIA 477
           V I 
Sbjct: 633 VVIC 636



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I+ G  H + V+  G++F+WG  S  +LG G + +   P+++  LS  N+  V+ G  H+
Sbjct: 295 IACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHT 354

Query: 80  AAWT 83
            A T
Sbjct: 355 CAVT 358



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 35/62 (56%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N  + +++ G+ HV  +++  +V+ WG   + QLG G+  +   P +V  L +K ++ V+
Sbjct: 567 NSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVA 626

Query: 74  AG 75
            G
Sbjct: 627 CG 628


>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
          Length = 815

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRHGKLGLG 330



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG    +  N + P+ V  + +  ++ V+CG  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     V    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
             +   G+ +Y FG+ E GKLGL N   G   TPQ
Sbjct: 203 AFVTTDGE-LYVFGEPENGKLGLPNQLLGNHRTPQ 236



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVVFA 365



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 42.4 bits (98), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWT 83
            +  +S G  HSA  T
Sbjct: 191 PVSWISCGYYHSAFVT 206



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ+  N+R PQLV  +  K I QV+ G  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGE 253

Query: 78  HSAAWT 83
           H+   T
Sbjct: 254 HTVVLT 259



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL--SN 66
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+    R    V++   S 
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGD-TEERNTFHVISFFTSE 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAALT 156


>gi|440794599|gb|ELR15759.1| Filamin repeat domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 2042

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 2/95 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGLN 471
           ++ACG +H A VT  G LYT+G+    +LGHG        P+RV AL    + + SCG  
Sbjct: 199 SVACGREHMACVTDAGELYTWGSATRNQLGHGEVGAKLAEPQRVQALAGKKIVACSCGDY 258

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            + C++D G  +Y +GDG  G LG G    +P+P+
Sbjct: 259 FSACVSDTG-VLYTWGDGSTGALGHGEMTNEPSPR 292



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 36/64 (56%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A +CG   SA V+  G LYT+G+G  G LGHG   N   P  V A     V+SV CG  H
Sbjct: 252 ACSCGDYFSACVSDTGVLYTWGDGSTGALGHGEMTNEPSPRLVEAFKNKTVKSVVCGACH 311

Query: 473 TVCI 476
           TVCI
Sbjct: 312 TVCI 315



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 3/91 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLN 471
           AIA    +SA ++  G LYT+G G  G  G    +  K PE+V+ AL    V SV+CG  
Sbjct: 147 AIAANELYSAALSDTGELYTWGIGPLGHKGASNPIKPK-PEKVLGALENKRVISVACGRE 205

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           H  C+ D G+ +Y +G     +LG G  G K
Sbjct: 206 HMACVTDAGE-LYTWGSATRNQLGHGEVGAK 235



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALSNKNI 69
           A +N  ++ ++ G EH+  V++ G+++ WG+ +  QLG G       EPQ V AL+ K I
Sbjct: 191 ALENKRVISVACGREHMACVTDAGELYTWGSATRNQLGHGEVGAKLAEPQRVQALAGKKI 250

Query: 70  RQVSAGRSHSA 80
              S G   SA
Sbjct: 251 VACSCGDYFSA 261



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 35/73 (47%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + A     IV  S G      VS+TG ++ WG+ S   LG G   N   P+LV A  N
Sbjct: 240 QRVQALAGKKIVACSCGDYFSACVSDTGVLYTWGDGSTGALGHGEMTNEPSPRLVEAFKN 299

Query: 67  KNIRQVSAGRSHS 79
           K ++ V  G  H+
Sbjct: 300 KTVKSVVCGACHT 312



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 35/67 (52%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I+ I+    +  A+S+TG+++ WG       G  N I  +  +++ AL NK +  V+ GR
Sbjct: 145 IIAIAANELYSAALSDTGELYTWGIGPLGHKGASNPIKPKPEKVLGALENKRVISVACGR 204

Query: 77  SHSAAWT 83
            H A  T
Sbjct: 205 EHMACVT 211


>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
           [Equus caballus]
          Length = 966

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+A++T +G ++TFG G  G+LGH +T N   P  V  L    V  ++CG  HT
Sbjct: 192 LACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELTPCLVTELVGKRVTQIACGRRHT 251

Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++D GK V++FG GE G+LG G T  +  P
Sbjct: 252 LAYVSDLGK-VFSFGSGEGGQLGNGATHHQLIP 283



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  ++ +  +Y++G  D G+LG G T N   P  + AL+   VE ++CG +HT
Sbjct: 140 ISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGSHT 199

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             +   G  V+ FG G+ G+LG  +T  + TP
Sbjct: 200 ALLTKDG-LVFTFGAGKCGQLGHNSTQNELTP 230



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 41/71 (57%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V IS G  H +A+S +  V++WG N   QLGLG+  N   P L+ AL N+ +  ++ G 
Sbjct: 137 LVQISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGG 196

Query: 77  SHSAAWTAPPL 87
           SH+A  T   L
Sbjct: 197 SHTALLTKDGL 207



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSA 74
           +I+ I+ G  H LA+S  G++FAWG N+  QLG+G    +   PQ+V  LS   + Q+SA
Sbjct: 83  NIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISA 142

Query: 75  GRSHSAA 81
           G +HS A
Sbjct: 143 GEAHSMA 149



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I CG  HS  ++  G L+ +G   YG+LG G T  +   P+ V  L+ V +  +S G  H
Sbjct: 87  ITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISAGEAH 146

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ ++   + VY++G  + G+LGLG+T  K +P
Sbjct: 147 SMALS-MSRNVYSWGRNDCGQLGLGHTNNKDSP 178



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 36/76 (47%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A  N  +  ++ G  H   ++  G VF +G     QLG  +  N   P LV  L  K 
Sbjct: 181 IEALDNQEVEFLACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELTPCLVTELVGKR 240

Query: 69  IRQVSAGRSHSAAWTA 84
           + Q++ GR H+ A+ +
Sbjct: 241 VTQIACGRRHTLAYVS 256


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 12/105 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +++ACG  H+A+VTS G L+TFG+G +G LGHG   +  +P+ V +L  +    V+CG+ 
Sbjct: 417 SSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGVW 476

Query: 472 HTVCIAD-----------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +            GK ++ +GDG+ G+LG G+   K  P
Sbjct: 477 HTAAVVEVMVGYSNAGGSSGK-LFTWGDGDKGRLGHGDKEQKLVP 520



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  HS  VT +G L+T+G+G   YG LGHG  ++   P+RV   L  + V SV+CG+
Sbjct: 364 VACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGIRVSSVACGV 423

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 424 WHTALVTSAGQ-LFTFGDGTFGVLGHGD 450



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++ +G+   GRLGHG  ++   P+ V AL   + E V+CG  H+
Sbjct: 312 IACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPKLVEALATTNTEFVACGEYHS 371

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLGNTGLKPTPQ 506
             +   G  ++ +GDG   YG LG GN     TP+
Sbjct: 372 CAVTLSGD-LFTWGDGTHSYGLLGHGNDISHWTPK 405



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+S  G++  +   G+   L      + +   IACG  H AV+T+   +YT+G G  GRL
Sbjct: 554 GSSLYGQLGDVRADGKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRL 613

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           GHG  M+   P  V AL +  V+SV+CG   T  I 
Sbjct: 614 GHGDVMDRNTPTLVEALKEKQVKSVACGSGFTAAIC 649



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 12/93 (12%)

Query: 414 IACGFKHSAVVT-----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           +ACG  H+A V            S+G L+T+G+GD GRLGHG      VP  V AL   +
Sbjct: 471 VACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDYN 530

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            + V+CG   TV +   G+ V+  G   YG+LG
Sbjct: 531 FKQVACGHTLTVALTINGR-VFTMGSSLYGQLG 562



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  + Y    +ACG   +  +T NG ++T G+  YG+LG     + K+P  V   
Sbjct: 519 VPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLGD-VRADGKLPGLVEGR 577

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L +  VE ++CG  H   +  K + VY +G G  G+LG G+   + TP
Sbjct: 578 LWEAFVEEIACGAYHVAVLTAKTE-VYTWGKGANGRLGHGDVMDRNTP 624



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G  H   V+  G+VF WG+ S  +LG G  ++   P+LV AL+  N   V+ 
Sbjct: 307 LDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPKLVEALATTNTEFVAC 366

Query: 75  GRSHSAAWT 83
           G  HS A T
Sbjct: 367 GEYHSCAVT 375



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 6   GRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           GR   AF    + +I+ G  HV  ++   +V+ WG  ++ +LG G+ ++   P LV AL 
Sbjct: 576 GRLWEAF----VEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALK 631

Query: 66  NKNIRQVSAGRSHSAA 81
            K ++ V+ G   +AA
Sbjct: 632 EKQVKSVACGSGFTAA 647



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 11/88 (12%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV-----------SNTGQVFAWGNNSDAQLGLGNQINY 55
           + + + K +  V ++ G  H  AV            ++G++F WG+    +LG G++   
Sbjct: 458 KEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQK 517

Query: 56  REPQLVLALSNKNIRQVSAGRSHSAAWT 83
             P  V AL + N +QV+ G + + A T
Sbjct: 518 LVPTCVAALVDYNFKQVACGHTLTVALT 545


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  V+CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VY++G    G+LGL
Sbjct: 97  LALNDKGQ-VYSWGLDSDGQLGL 118



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV++WG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y++G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGIDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + QV+ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|358419997|ref|XP_003584389.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Bos
           taurus]
          Length = 538

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT+ G LYTFG  + G+LG      +N KVP+ V  +++  ++ V+CG  
Sbjct: 240 ISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQ-VACGGG 298

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  KAVY FG G++G+LGLG
Sbjct: 299 HTVVLTE--KAVYTFGLGQFGQLGLG 322



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +++CG +H+A+ T N  L+ FG+ ++G+LG G+      P  + AL    V+ V+CG NH
Sbjct: 84  SLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNH 143

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ +   G+ VYA G    G+LGLG+T
Sbjct: 144 TLILTGGGQ-VYATGGNNEGQLGLGDT 169



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT T     P+ + ++    +  V CG NH
Sbjct: 293 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENH 351

Query: 473 TVCI 476
           T  I
Sbjct: 352 TALI 355



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           I A K   +  ++ G  H L ++  GQV+A G N++ QLGLG+        L+    S  
Sbjct: 126 IKALKPEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQH 185

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 186 KIKQLSAGSNTSAALT 201



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 39/68 (57%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FK    + +S G EH    +   ++F +G+N+  QLGLG++    +P  + AL  + ++ 
Sbjct: 77  FKRDIPISLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKF 136

Query: 72  VSAGRSHS 79
           V+ GR+H+
Sbjct: 137 VACGRNHT 144



 Score = 42.0 bits (97), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   P  V     K
Sbjct: 178 ISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNICVPHQVTI--GK 235

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLP 105
            I  +S G  HSA  T      +T G   S   +LGLP
Sbjct: 236 PISWISCGYYHSAFVTTEG-ELYTFGEPESG--KLGLP 270


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G T  + +P
Sbjct: 307 TAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSP 338



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH      K PE V AL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + DKG+ VYA+G    G+LGL  T
Sbjct: 97  LALNDKGQ-VYAWGLATDGQLGLPGT 121



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  GT    +VP  + +L+++ +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H++ ++ KG  V+++G  +YG+LGLG
Sbjct: 147 YHSLALS-KGSEVFSWGQNKYGQLGLG 172



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
            H+ A    +IV +S G  H LA+++ GQV+AWG  +D QLGL G +   R P+ + +LS
Sbjct: 76  EHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
              I QV+ G  HS A
Sbjct: 136 EIQIVQVACGYYHSLA 151



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IA G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    V  + CG +
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 253 HTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +   I IV ++ G  H LA+S   +VF+WG N   QLGLG +   +  P ++ +L 
Sbjct: 129 RNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS   T
Sbjct: 189 GIPFAQIAAGGAHSFVLT 206



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 36/75 (48%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I    I+ G  H   ++ +G +F WG N   QLGL +  +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           +  +  G  H+AA T
Sbjct: 244 VVHICCGEDHTAALT 258



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++++G   YG+LG G     +  P  + +L  +    ++ G  H
Sbjct: 142 VACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDDNDRYVP 233



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   +V I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H+ A+ 
Sbjct: 284 NPRKVFELMGSLVTQITCGRQHTTAFV 310



 Score = 42.4 bits (98), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  I D+  G  H + V + G V+  G N   QLG  ++   + P+ V AL  
Sbjct: 26 RKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKARKRPEHVGALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98


>gi|118351057|ref|XP_001008807.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
 gi|89290574|gb|EAR88562.1| Kinesin motor domain containing protein [Tetrahymena thermophila
           SB210]
          Length = 1264

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
             ++ G+ HSA +++ G + T+G G+ G+LGH +  N  +P  V   +K+ + SV CG  
Sbjct: 893 CQVSLGYHHSACISNQGQILTWGRGNRGQLGHSSFENCLLPTPVNFFSKMSIVSVGCGWQ 952

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT+ +++ G+ V+++G GE G+LGLG+   + +PQ
Sbjct: 953 HTLALSNDGR-VFSWGFGEDGQLGLGDYQSQNSPQ 986



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 46/77 (59%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +  F  + IV +  G +H LA+SN G+VF+WG   D QLGLG+  +   PQ + +L    
Sbjct: 936  VNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGFGEDGQLGLGDYQSQNSPQFINSLEGYF 995

Query: 69   IRQVSAGRSHSAAWTAP 85
            + Q++AG SHS+  T+ 
Sbjct: 996  VTQINAGHSHSSVITSE 1012



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 9/107 (8%)

Query: 401  LTFANRLQYYEAA-----IACGFKHSAVVTSNGYLYTFGNGDYGRLGH---GTTMNWKVP 452
            + + N++ ++        ++CG   + V+     +Y+FG G Y RLGH    T  N   P
Sbjct: 1126 ICYFNKVNFFNKKNKAIQVSCGDSFTLVINEQSQVYSFGKGSYYRLGHLDIQTNQNVYEP 1185

Query: 453  ERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            + + +L    + SVS G  H V I + GK VY +G   Y +LGLG++
Sbjct: 1186 KLIESLKNFKITSVSTGCRHAVAITNDGK-VYTWGFNFYDQLGLGDS 1231



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALSNK 67
            I + KN  I  +S G  H +A++N G+V+ WG N   QLGLG+ + +Y++P  V  LS  
Sbjct: 1188 IESLKNFKITSVSTGCRHAVAITNDGKVYTWGFNFYDQLGLGDSEKDYQQPTKVTKLSGL 1247

Query: 68   NIRQVSAGRSHSA 80
            N++Q S G  H++
Sbjct: 1248 NVKQSSCGYFHTS 1260



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESVSCGL 470
             +++ G +H+  +T++G +YT+G   Y +LG G +  +++ P +V  L+ ++V+  SCG 
Sbjct: 1197 TSVSTGCRHAVAITNDGKVYTWGFNFYDQLGLGDSEKDYQQPTKVTKLSGLNVKQSSCGY 1256

Query: 471  NHT 473
             HT
Sbjct: 1257 FHT 1259



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)

Query: 427 NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAF 486
           NG +Y +GNG  GRLG      +K P+ +  +       VS G +H+ CI+++G+ +  +
Sbjct: 859 NGIIYIWGNGKDGRLGIEGEKPFKFPQIIPNIQACQ---VSLGYHHSACISNQGQ-ILTW 914

Query: 487 GDGEYGKLGLGN--TGLKPTP 505
           G G  G+LG  +    L PTP
Sbjct: 915 GRGNRGQLGHSSFENCLLPTP 935



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 19/82 (23%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 399  VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
             P+ F +++     ++ CG++H+  ++++G ++++G G+ G+LG G   +   P+ + +L
Sbjct: 934  TPVNFFSKMSI--VSVGCGWQHTLALSNDGRVFSWGFGEDGQLGLGDYQSQNSPQFINSL 991

Query: 459  NKVHVESVSCGLNHTVCIADKG 480
                V  ++ G +H+  I  +G
Sbjct: 992  EGYFVTQINAGHSHSSVITSEG 1013



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 11/102 (10%)

Query: 403  FANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
            F N L+ Y+   I  G  HS+V+TS G    FG     RL + T  N  +P  +  L  +
Sbjct: 987  FINSLEGYFVTQINAGHSHSSVITSEGIFMMFGCNIDHRLMNKTNQNQFLP-CITELEFL 1045

Query: 462  HVE--------SVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              E          S G+NH+  I   G  +Y  G G  G+LG
Sbjct: 1046 RQEYGSDYNAVKASLGVNHSAVITKNGN-LYTSGLGNEGQLG 1086


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  V+CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +V+CG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A+ACG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCQKQTSPQ 182



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV ++ G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  V+ G +H+ A
Sbjct: 84 QNIVAVACGEAHTLA 98



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + QV+ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P R        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|345292915|gb|AEN82949.1| AT5G12350-like protein, partial [Capsella grandiflora]
          Length = 169

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNH 472
           +ACG   S  V+ +G LYT+G GD+G LGHG  ++  VP+RV   +  +HV S++CG  H
Sbjct: 36  VACGEYXSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYH 95

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T  +   G+ ++ FGDG +G LG G+
Sbjct: 96  TAVVTSAGQ-LFTFGDGTFGVLGHGD 120



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+AVVTS G L+TFG+G +G LGHG   +  +P  + +L  +     +CG+ 
Sbjct: 87  SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVW 146

Query: 472 HTVCIAD 478
           HT  + +
Sbjct: 147 HTAAVVE 153



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 431 YTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490
           +++G    GRLGHG   N + P+ + AL   ++E V+CG  +  C       +Y +G G+
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACG-EYXSCAVSLSGDLYTWGKGD 59

Query: 491 YGKLGLGN 498
           +G LG GN
Sbjct: 60  FGILGHGN 67


>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
           griseus]
 gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
          Length = 551

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 216 CSMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 248



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 240 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 299

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 300 PTPVVVEKDRIIEIAACHSAHTSA 323



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            VV      +E  +C   HT     +G  VY +G
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T++G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQPIPR 196



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +++I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK + 
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVM 208

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 209 NIACGQMCSMA 219



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G T  + +P
Sbjct: 307 TAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSP 338



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH      K PE V AL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + DKG+ VYA+G    G+LGL  T
Sbjct: 97  LALNDKGQ-VYAWGLATDGQLGLPGT 121



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  GT    +VP  + +L+++ +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H++ ++ KG  V+++G  +YG+LGLG
Sbjct: 147 YHSLALS-KGSEVFSWGQNKYGQLGLG 172



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
            H+ A    +IV +S G  H LA+++ GQV+AWG  +D QLGL G +   R P+ + +LS
Sbjct: 76  EHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
              I QV+ G  HS A
Sbjct: 136 EIQIVQVACGYYHSLA 151



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IA G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    V  + CG +
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 253 HTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +   I IV ++ G  H LA+S   +VF+WG N   QLGLG +   +  P ++ +L 
Sbjct: 129 RNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS   T
Sbjct: 189 GIPFAQIAAGGAHSFVLT 206



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 36/75 (48%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I    I+ G  H   ++ +G +F WG N   QLGL +  +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           +  +  G  H+AA T
Sbjct: 244 VVHICCGEDHTAALT 258



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++++G   YG+LG G     +  P  + +L  +    ++ G  H
Sbjct: 142 VACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDDNDRYVP 233



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   +V I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H+ A+ 
Sbjct: 284 NPRKVFELMGSLVTQITCGRQHTTAFV 310



 Score = 42.4 bits (98), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  I D+  G  H + V + G V+  G N   QLG  ++   + P+ V AL  
Sbjct: 26 RKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKARKRPEHVGALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G T  + +P
Sbjct: 307 TAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSP 338



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH      K PE V AL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + DKG+ VYA+G    G+LGL  T
Sbjct: 97  LALNDKGQ-VYAWGLATDGQLGLPGT 121



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  GT    +VP  + +L+++ +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H++ ++ KG  V+++G  +YG+LGLG
Sbjct: 147 YHSLALS-KGSEVFSWGQNKYGQLGLG 172



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
            H+ A    +IV +S G  H LA+++ GQV+AWG  +D QLGL G +   R P+ + +LS
Sbjct: 76  EHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
              I QV+ G  HS A
Sbjct: 136 EIQIVQVACGYYHSLA 151



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IA G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    V  + CG +
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 253 HTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +   I IV ++ G  H LA+S   +VF+WG N   QLGLG +   +  P ++ +L 
Sbjct: 129 RNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS   T
Sbjct: 189 GIPFAQIAAGGAHSFVLT 206



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 36/75 (48%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I    I+ G  H   ++ +G +F WG N   QLGL +  +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           +  +  G  H+AA T
Sbjct: 244 VVHICCGEDHTAALT 258



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++++G   YG+LG G     +  P  + +L  +    ++ G  H
Sbjct: 142 VACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDDNDRYVP 233



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   +V I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H+ A+ 
Sbjct: 284 NPRKVFELMGSLVTQITCGRQHTTAFV 310



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  I D+  G  H + V + G V+  G N   QLG  ++   + P+ V AL  
Sbjct: 26 RKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKARKRPEHVGALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  V+CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +V+CG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A+ACG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCQKQTSPQ 182



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV ++ G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  V+ G +H+ A
Sbjct: 84 QNIVAVACGEAHTLA 98



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + QV+ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P R        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G T  + +P
Sbjct: 307 TAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSP 338



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH      K PE V AL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + DKG+ VYA+G    G+LGL  T
Sbjct: 97  LALNDKGQ-VYAWGLATDGQLGLPGT 121



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  GT    +VP  + +L+++ +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ KG  V+++G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KGSEVFSWGQNKYGQLGLGYEYKKQTSPQ 182



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
            H+ A    +IV +S G  H LA+++ GQV+AWG  +D QLGL G +   R P+ + +LS
Sbjct: 76  EHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
              I QV+ G  HS A
Sbjct: 136 EIQIVQVACGYYHSLA 151



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 1/110 (0%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           Q+ P    + L    A IA G  HS V+T +G ++ +G   +G+LG     +  VP  + 
Sbjct: 178 QTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLK 237

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +L    V  + CG +HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 238 SLRSQKVVHICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +   I IV ++ G  H LA+S   +VF+WG N   QLGLG +   +  PQ++ +L 
Sbjct: 129 RNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS   T
Sbjct: 189 GIPFAQIAAGGAHSFVLT 206



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 40/80 (50%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I    I+ G  H   ++ +G +F WG N   QLGL +  +   P L+ +
Sbjct: 179 TSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ +  +  G  H+AA T
Sbjct: 239 LRSQKVVHICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++++G   YG+LG G     +  P+ + +L  +    ++ G  H
Sbjct: 142 VACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDDNDRYVP 233



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  +V I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H+ A+ 
Sbjct: 284 NPRKVFELMGSVVTQITCGRQHTTAFV 310



 Score = 42.0 bits (97), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++   + P+ V AL  
Sbjct: 26 RKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKARKRPEHVGALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 28/238 (11%)

Query: 224 KMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTG 283
           K K  D + P    KV  +GE A DAGGV  +    +  ELL          P       
Sbjct: 662 KTKNVDYKKP---LKVIFVGEEAVDAGGVRKEFFLLIMRELLD---------PKYGMFRY 709

Query: 284 YNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTD 343
           Y   R I   D +     L H   +G++ G+AI     + LP    ++K ++ +  +  D
Sbjct: 710 YEESRLIWFSDKTFEDSDLFHL--IGVVCGLAIYNFTIVDLPFPLALYKKLLNKKPSLDD 767

Query: 344 LEDNDTLYAQSLRAIRDIHLSGVTEA---NFPEIIPLECFEGASWTGRITPIVTGGQSVP 400
           L++      + ++ + D     + EA   NF   I +E F     T  I  +V  G  +P
Sbjct: 768 LKELIPDVGRGMQQLLDYPEDDIEEAFCLNF--TITVENFG----TTEIKELVPKGADIP 821

Query: 401 LTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +   NR  + +A +   F  S        LY+  +  + ++  G  +    P  + A+
Sbjct: 822 VVKQNRQDFVDAYVDYIFNRSVAS-----LYSAFHEGFHKVCGGKVLQLFQPSELQAM 874


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  V+CG  HT
Sbjct: 256 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 315

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 316 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 347



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +V+CG  HT
Sbjct: 48  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHT 105

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 106 LALNDKGQ-VYAWGLDSDGQLGL 127



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A+ACG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 96  VAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 155

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 156 YHSLALS-KASEVFCWGQNKYGQLGLGIDCQKQTSPQ 191



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV ++ G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 85  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 144

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 145 DIQIVQVACGYYHSLA 160



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 138 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 197

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 198 GIPFMQVAAGGAHSFVLT 215



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 204 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 263

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 264 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 295



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 188 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 247

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 248 LRSQKIVYICCGEDHTAALT 267



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 151 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAH 210

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 211 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 242



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 35  RRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 92

Query: 67  KNIRQVSAGRSHSAA 81
           +NI  V+ G +H+ A
Sbjct: 93  QNIVAVACGEAHTLA 107



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 233 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 292

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + QV+ GR H++A+ 
Sbjct: 293 NPRKVFELMGSIVTQVACGRQHTSAFV 319



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P R        V  V CGL HTV + D G  VY  G
Sbjct: 10  MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 68

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 69  CNDLGQLGHEKSRKKP 84


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  V+CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +V+CG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A+ACG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCQKQTSPQ 182



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV ++ G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  V+ G +H+ A
Sbjct: 84 QNIVAVACGEAHTLA 98



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + QV+ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P R        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|356566559|ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 525

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 5/135 (3%)

Query: 372 PEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLY 431
           P +IP  C E A      +     G       +N    Y   I+CG +HS V+T  G L 
Sbjct: 315 PHLIP--CIESAG--KDKSSAFHQGSGAGAQGSNVTGSYVMDISCGGRHSVVITDAGALL 370

Query: 432 TFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEY 491
           TFG G YG+ G G  ++   P  V +L    VE ++ GL HT+C+   G+ +YAFG  ++
Sbjct: 371 TFGWGLYGQCGQGNNVDQLRPTLVPSLLGTRVEKIAAGLWHTLCVTVNGQ-IYAFGGNQF 429

Query: 492 GKLGLGNTGLKPTPQ 506
           G+LG G    + +P+
Sbjct: 430 GQLGTGTDQPETSPR 444



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP     R++     IA G  H+  VT NG +Y FG   +G+LG GT      P ++ A 
Sbjct: 394 VPSLLGTRVE----KIAAGLWHTLCVTVNGQIYAFGGNQFGQLGTGTDQPETSPRQLDAS 449

Query: 458 -LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
                H   VSCG  H+  + D G  ++ +G  +YG+LGLG++
Sbjct: 450 RFENKHSSIVSCGARHSALLTDDGH-LFTWGWNKYGQLGLGDS 491



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 50/77 (64%), Gaps = 4/77 (5%)

Query: 403 FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           F N+   + + ++CG +HSA++T +G+L+T+G   YG+LG G +++  +P + V++    
Sbjct: 451 FENK---HSSIVSCGARHSALLTDDGHLFTWGWNKYGQLGLGDSVDRNIPGQ-VSIAGCR 506

Query: 463 VESVSCGLNHTVCIADK 479
             +V+CG  HT+ + DK
Sbjct: 507 PRNVACGWWHTLLLGDK 523



 Score = 45.4 bits (106), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSNKNIRQVS 73
           + I  +S+G  H LA+S+ GQV+ WG   + QLGLG+++     P L+  + +    + S
Sbjct: 271 VKITSVSLGGRHTLALSDVGQVWGWGYGGEGQLGLGSRVKMVSSPHLIPCIESAGKDKSS 330

Query: 74  AGRSHSAA 81
           A    S A
Sbjct: 331 AFHQGSGA 338



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 4   TSGRHIPA--FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           TS R + A  F+N H   +S G  H   +++ G +F WG N   QLGLG+ ++   P  V
Sbjct: 441 TSPRQLDASRFENKHSSIVSCGARHSALLTDDGHLFTWGWNKYGQLGLGDSVDRNIPGQV 500

Query: 62  LALSNKNIRQVSAGRSHS 79
            +++    R V+ G  H+
Sbjct: 501 -SIAGCRPRNVACGWWHT 517



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA--LSN 66
           +P+     +  I+ G  H L V+  GQ++A+G N   QLG G       P+ + A    N
Sbjct: 394 VPSLLGTRVEKIAAGLWHTLCVTVNGQIYAFGGNQFGQLGTGTDQPETSPRQLDASRFEN 453

Query: 67  KNIRQVSAGRSHSA 80
           K+   VS G  HSA
Sbjct: 454 KHSSIVSCGARHSA 467



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 35/64 (54%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           +++DIS G  H + +++ G +  +G     Q G GN ++   P LV +L    + +++AG
Sbjct: 349 YVMDISCGGRHSVVITDAGALLTFGWGLYGQCGQGNNVDQLRPTLVPSLLGTRVEKIAAG 408

Query: 76  RSHS 79
             H+
Sbjct: 409 LWHT 412


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  V+CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VY++G    G+LGL
Sbjct: 97  LALNDKGQ-VYSWGLDSDGQLGL 118



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV++WG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y++G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + QV+ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|123497222|ref|XP_001327135.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121910060|gb|EAY14912.1| hypothetical protein TVAG_380220 [Trichomonas vaginalis G3]
          Length = 2680

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 96/230 (41%), Gaps = 25/230 (10%)

Query: 162  LVHPSLRPLFAPRVYTL------PLVRSVGKTMLVGK---NFGPSVTVRRLTTKSKQTVK 212
            L  P+LRPL     Y +        +  V +  +  K   NF  +      T  +     
Sbjct: 2277 LRSPTLRPLLHEISYAIEPQYKYKQIDHVARQNITEKPTLNFSRTAAALVQTNPNSPHAI 2336

Query: 213  PIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
             +F Q+  QV   K S L+  +  W   L+GEGA DAGG   D  +E+C E+      + 
Sbjct: 2337 SLFDQVISQVSPEKLSSLKNRNAPWIADLVGEGAIDAGGPGRDVFSEICQEMFLPFNKVF 2396

Query: 273  VRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWK 332
            ++TP   A        +I +PD SE         + G    +   T+ P PL L+  VWK
Sbjct: 2397 IQTPRTRAQN--QMCEFIPDPDSSEE-----RLLYAGAFVALCFVTQSPQPLKLNFSVWK 2449

Query: 333  LIVQEPVTFTDLEDNDTLYAQSL-----RAIRDIHLSGVTEANFPEIIPL 377
             +    ++  DL D D  +A SL     R +  I LSG    N  ++IP 
Sbjct: 2450 YLTGNEISDQDLLDMDPDFAASLNVTGQRPLSIISLSG----NKIDLIPF 2495


>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
 gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
          Length = 994

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 53/93 (56%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +I+CG +H+A ++  G ++TFG+G +G+LGH +  +   P  V  L    V  V+CG +H
Sbjct: 225 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHH 284

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           T+   D    +Y+FG G  G+LG G    +  P
Sbjct: 285 TLVFEDSSNRIYSFGCGMQGQLGNGEQVKQSVP 317



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A I+ G  HS V++ +G ++ +G+   G+LG G T +  +P  V +L+     S+SCG  
Sbjct: 172 AQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGE 231

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  ++ KG  V+ FG G +G+LG
Sbjct: 232 HTATLS-KGGTVFTFGSGGFGQLG 254



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 42/76 (55%)

Query: 5   SGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           S +H+ +   I +  IS G  H   +S +G VF WG+NS  QLGLG+  +   P +V +L
Sbjct: 159 SPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSL 218

Query: 65  SNKNIRQVSAGRSHSA 80
           S K    +S G  H+A
Sbjct: 219 SGKKTVSISCGGEHTA 234



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVL 62
           T  R +    N  ++ I+ G +H +A+SN G +F WG N+  QLGL   Q   + PQ + 
Sbjct: 105 TVCRPLKGLDNRQVIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQ 164

Query: 63  ALSNKNIRQVSAGRSHS 79
           +L    + Q+SAG +HS
Sbjct: 165 SLCEIPVAQISAGGNHS 181



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           IACG +HS  ++++G L+ +G    G+LG        + P+ + +L ++ V  +S G NH
Sbjct: 121 IACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNH 180

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  ++  G  V+ +G    G+LGLG+T  +  P
Sbjct: 181 SFVLSLSG-VVFGWGSNSAGQLGLGDTTDRFIP 212



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           +  T+ R IP    +      V IS G EH   +S  G VF +G+    QLG  +  +  
Sbjct: 203 LGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEH 262

Query: 57  EPQLVLALSNKNIRQVSAGRSHS 79
            P+LV  L    + QV+ GR H+
Sbjct: 263 HPRLVAELWGSKVSQVTCGRHHT 285


>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1086

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 10/104 (9%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           + +ACG  H+A+V+ +G L+T+G+G +G LGHG+  +   P+ V +L  + V+SV+CG  
Sbjct: 420 SKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSW 479

Query: 472 HTVCIAD----------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  I D           G  ++ +GDG+ G+LG  +   K  P
Sbjct: 480 HTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVP 523



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 1/80 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +I+ G KH+A++T  G ++ +G+G  G+LGH   M+  +P+ V +L+ VH++SV CG   
Sbjct: 314 SISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLDDVHIKSVVCGEYQ 373

Query: 473 TVCIADKGKAVYAFGDGEYG 492
           T  +   G+ +Y +GD + G
Sbjct: 374 TCALTHSGE-LYTWGDNKNG 392



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVVTS-----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           ++ACG  H+A +              G L+T+G+GD GRLGH       VP  V  L   
Sbjct: 473 SVACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKLVDY 532

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               VSCG   TV + + GK VY  G   +G+LG
Sbjct: 533 DFIRVSCGRMLTVALTNTGK-VYTMGSSVHGQLG 565



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  IS+G +H   ++  G+VF WG+ S  +LG    ++   P++V +L + +I+ V  
Sbjct: 310 LDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLDDVHIKSVVC 369

Query: 75  GRSHSAAWT 83
           G   + A T
Sbjct: 370 GEYQTCALT 378


>gi|359718915|ref|NP_852086.3| probable E3 ubiquitin-protein ligase C12orf51 homolog [Mus musculus]
          Length = 4418

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 35/337 (10%)

Query: 105  PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
            P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 3917 PADAADPRMACLSNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTPMYAHSIAALL 3974

Query: 164  HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
              +   +F     T+ + R +  T+     +  P +T+  L     + + +    F Q +
Sbjct: 3975 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLEIVGGEIRASENSYFCQAA 4033

Query: 220  RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
            RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 4034 RQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 4093

Query: 273  VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L P  W
Sbjct: 4094 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDLLPSFW 4149

Query: 332  KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII-----------PLEC 379
            K +V EP+    DL++ D L    ++    I+     EA   EI            P  C
Sbjct: 4150 KTLVGEPLDPDQDLQEADILTYNYVKKFESINDESELEALCAEIASQHLATESPEGPKPC 4209

Query: 380  --FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
              F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 4210 CRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 4245


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 12/105 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +++ACG  H+A+V+S G L+T+G+G +G LGHG   ++  P+ V +L+ + V S +CG  
Sbjct: 414 SSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSW 473

Query: 472 HTVCIAD-----------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  I +            GK ++ +GDG+ G+LG  + G K  P
Sbjct: 474 HTAAIVEVMFDRFRYNSASGK-LFTWGDGDEGRLGHVDNGSKLVP 517



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G KH+A+ T  G ++ +G+G +GRLG    M+   P+ V +LN +HV++V+CG  HT
Sbjct: 309 IALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYHT 368

Query: 474 VCIADKGKAVYAFGD 488
             + D G+ VY +G+
Sbjct: 369 CALTDSGE-VYTWGN 382



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVV-----------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           + ACG  H+A +           +++G L+T+G+GD GRLGH    +  VP RV  L   
Sbjct: 467 SAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDY 526

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               VSCG   TV + + GK V+A G  +YG+LG
Sbjct: 527 DFVQVSCGRMLTVALTNMGK-VFAMGSAKYGQLG 559



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 10/123 (8%)

Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
           GR+  +  G + VP      + Y    ++CG   +  +T+ G ++  G+  YG+LG    
Sbjct: 504 GRLGHVDNGSKLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLG---- 559

Query: 447 MNWKVPERVV----ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
            N    ++ V     L +  V+ +S G  H V +   G +VY +G GE G+LGLG+T  +
Sbjct: 560 -NPHARDKAVMVEGQLKQEFVKVISTGSYH-VAVLTSGGSVYTWGRGENGQLGLGDTEDR 617

Query: 503 PTP 505
            TP
Sbjct: 618 YTP 620



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 5/160 (3%)

Query: 350 LYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQY 409
           L + ++  + +I L G   A   +   + C+    W GR+   +    S P    +    
Sbjct: 298 LESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKW-GRLGQKIDMDISSPKIVDSLNGL 356

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGR--LGHGTTMNWKVPERVV-ALNKVHVESV 466
           +   +ACG  H+  +T +G +YT+GN       L  G T +  +P+++  +L+ + + SV
Sbjct: 357 HVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSV 416

Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +CG  HT  ++  G+ ++ +GDG +G LG G+     +P+
Sbjct: 417 ACGEWHTAIVSSCGR-LFTYGDGTFGVLGHGDLRSYSSPK 455



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 40/70 (57%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           Q +   I+ G  H AV+TS G +YT+G G+ G+LG G T +   P  V AL    V +++
Sbjct: 576 QEFVKVISTGSYHVAVLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTIT 635

Query: 468 CGLNHTVCIA 477
           CG + T  I+
Sbjct: 636 CGPSFTAAIS 645



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 36/62 (58%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           IS G+ HV  +++ G V+ WG   + QLGLG+  +   P  V AL ++ +  ++ G S +
Sbjct: 582 ISTGSYHVAVLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFT 641

Query: 80  AA 81
           AA
Sbjct: 642 AA 643



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
           A  ++H  +I++G +H    +  G+VF WG+    +LG    ++   P++V +L+  +++
Sbjct: 302 AMLDVH--NIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSLNGLHVK 359

Query: 71  QVSAGRSHSAAWT 83
            V+ G  H+ A T
Sbjct: 360 NVACGEYHTCALT 372


>gi|340377199|ref|XP_003387117.1| PREDICTED: probable E3 ubiquitin-protein ligase C12orf51-like
            [Amphimedon queenslandica]
          Length = 3669

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 16/185 (8%)

Query: 211  VKPIFAQISRQVVKMKGSDLRLP-------SRAWKVKLLGEGADDAGGVFDDTITEMCGE 263
            +K  F Q + Q++ +  S L +P       + A+ VKL GE      G F   + ++  E
Sbjct: 3324 LKTQFCQAANQMLSVPSSQLCVPLASGGDPTYAFNVKLSGEEVHGTSGSFRHFLWQVVRE 3383

Query: 264  LLSGAVPLLVRTPNGVADTGYNRDRYILNP-DLSESLQSLMHFKFLGILFGVAIRTKKPL 322
            L S  VP+L++ P+    +G N+ ++IL+   +S S + L+ F   G L GV++R   P+
Sbjct: 3384 LESPLVPVLIQCPSSA--SGINKGKFILSTGSMSYSEEKLLFF--FGQLLGVSLRADVPV 3439

Query: 323  PLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEG 382
             L L    WK + +EP++  DL++ D++     + I    L    E +F EII   C + 
Sbjct: 3440 ALDLLVCFWKSLKEEPLSLVDLKEADSVTYSLTQEI----LEAKDETSFNEIISSLCQDT 3495

Query: 383  ASWTG 387
             + T 
Sbjct: 3496 DTHTA 3500


>gi|327271071|ref|XP_003220311.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
           HECTD3-like [Anolis carolinensis]
          Length = 857

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 35/194 (18%)

Query: 180 LVRSVGKTMLVGK----------NFGPSVTV-RRLTTKSKQ--TVKP-----IFAQISRQ 221
           L+ S  +TML+ +          NF P + + RRL  + +    + P     +FAQ+   
Sbjct: 442 LLLSKQRTMLITQCLKDSETSKPNFMPRLYINRRLAMEHRDNPALDPSCKNTVFAQVYEG 501

Query: 222 VV----KMKGSDLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------ 268
           +       K  D R P R    W+ K + EG  D GG F D+I +M  EL   +      
Sbjct: 502 LKPSDKYEKPLDYRWPLRYDQWWECKFIAEGIIDQGGGFRDSIADMSEELCPSSAETPVP 561

Query: 269 VPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSP 328
           +P  VRT N  + TG  RD Y+ NP    S +    ++++G + G A+R K+ L L L  
Sbjct: 562 LPFFVRTSNQGSGTGEARDMYVPNP----SCKEFTKYEWIGQIMGAALRGKEFLVLALPG 617

Query: 329 LVWKLIVQEPVTFT 342
            VWK +  E V+++
Sbjct: 618 FVWKQLTGEEVSWS 631


>gi|149044295|gb|EDL97616.1| rCG42876 [Rattus norvegicus]
          Length = 637

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +H+A+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG NH
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNH 136

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+   D G  VYA G    G+LGLG+T  + T
Sbjct: 137 TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 167



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           I+CG+ HSA VT    +Y FG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 233 ISCGYYHSAFVTKK-VVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENH 291

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  + D G  +Y FGDG +GKLGLG
Sbjct: 292 TALMTDIG-LMYTFGDGRHGKLGLG 315



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  +P  V     +    +SCG  H+
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISW--ISCGYYHS 240

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
             +  K   VYAFG G++G+LGLG
Sbjct: 241 AFVTKK--VVYAFGLGQFGQLGLG 262



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+   FKN   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + A
Sbjct: 62  ENIPSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKA 121

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L  + ++  + GR+H+   T
Sbjct: 122 LKPEKVKLAACGRNHTLVST 141



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G     A++  G++F WG+NS+ Q+GL N+ N   P  V     K I  +S G 
Sbjct: 180 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCGY 237

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 238 YHSAFVT 244



 Score = 42.4 bits (98), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 15/83 (18%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN--------QINYREPQL 60
           I A K   +   + G  H L  ++TG V+A G N++ QLGLG+        QI +  P  
Sbjct: 119 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSD 178

Query: 61  VLALSNKNIRQVSAGRSHSAAWT 83
           +       I+Q+SAG + SAA T
Sbjct: 179 I-------IKQLSAGANTSAALT 194


>gi|340379689|ref|XP_003388359.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 1950

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           HS  V  NG +Y++G G+YG+LGHG     K P+ +  L+   + SVSCG  H+  +   
Sbjct: 166 HSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSNKVIRSVSCGNRHSAAVTID 225

Query: 480 GKAVYAFGDGEYGKLGLGNTG 500
            + ++ +G+GE+G+LG G+TG
Sbjct: 226 NE-LWTWGEGEHGRLGHGDTG 245



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I +  ++ I+D++ G  H LA++  G V+ WG NS  Q G G+  N   +P  V  L   
Sbjct: 312 IQSLADVIIIDVTTGDGHCLALTQRGDVYGWGTNSMGQCGQGHNNNSISKPGKVEGLDGV 371

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            ++Q+SAG SHS  WTA P
Sbjct: 372 QVQQISAGTSHSIVWTAIP 390



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 35/58 (60%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
           H LAV   G+V++WG     +LG GN    + P+L+  LSNK IR VS G  HSAA T
Sbjct: 166 HSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSNKVIRSVSCGNRHSAAVT 223



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 10/102 (9%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYG--------RLGHGTTMNWKVPERVVALNKVHVE 464
           +++CG +HSA VT +  L+T+G G++G        RLGHG T     P+ + AL    ++
Sbjct: 211 SVSCGNRHSAAVTIDNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALKGQLIQ 270

Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            VS     ++ +   GK +Y+FG G    LG  +T    TPQ
Sbjct: 271 KVSAANQFSIALTKTGK-LYSFGKGSGTGLGTPDTSYS-TPQ 310



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 13/116 (11%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           ++ P+   N +Q   A   C F    +V  NG +   G G YGRLG GT+    V   + 
Sbjct: 91  KATPVPHMNNIQSIIAGQYCTF----MVLHNGSMKCCGKGSYGRLGLGTS---DVQTSIK 143

Query: 457 ALNK------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            L+       V   + S G +      DK   VY++G+GEYGKLG GN   + TP+
Sbjct: 144 DLDTFPEGTLVKSMATSRGSDGHSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTPK 199


>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
          Length = 870

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 121 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 180

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 181 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 212



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
          R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 3  RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 62

Query: 66 NKNIRQVSAGRSHSAAWT 83
               QV+AG +HS   T
Sbjct: 63 GIPFMQVAAGGAHSFVLT 80



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 69  VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 128

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 129 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 160



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 53  TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 112

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 113 LRSQKIVYICCGEDHTAALT 132



 Score = 45.4 bits (106), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 16  VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAH 75

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 76  SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 107



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 98  LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 157

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 158 NPRKVFELMGSIVTQIACGRQHTSAFV 184


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG+G+T  + +P
Sbjct: 307 SAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSP 338



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+V AL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KRPEQVGALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + DKG+ VYA+G    G+LGL  T
Sbjct: 97  LTLNDKGQ-VYAWGFAADGQLGLPGT 121



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  ++ IV ++ G  H LA+S   +VF+WG N   QLGLG  +  +  PQL+ +L 
Sbjct: 129 RNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS A T
Sbjct: 189 GIPFGQIAAGGAHSFALT 206



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  GT    +VP  + +L+ V +  V+CG  
Sbjct: 88  AVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ KG  V+++G  ++G+LGLG    K T PQ
Sbjct: 148 HSLALS-KGSEVFSWGQNKHGQLGLGYDLKKQTSPQ 182



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G  HS  +T +G ++ +G   +G+LG     +  VP  + +L    +  +SCG +HT
Sbjct: 195 IAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +TG +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTGHEINPR 286



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H L +++ GQV+AWG  +D QLGL G +   R P+ + +LS
Sbjct: 76  EQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAAWT 83
           +  I QV+ G  HS A +
Sbjct: 136 DVQIVQVACGYYHSLALS 153



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I    I+ G  H  A++ +G VF WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +S G  H+AA T
Sbjct: 239 LRSQKIVYISCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 10/90 (11%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG---LGNQI 53
           ++  + R++P    + ++  IV IS G +H  A++  G VF +G     QLG    G++I
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEI 283

Query: 54  NYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
           N   P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 N---PRKVFELMGNIVTQIACGRQHTSAFV 310



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++++G   +G+LG G  +  +  P+ + +L  +    ++ G  H
Sbjct: 142 VACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G AV+ +G  ++G+LGL +   +  P
Sbjct: 202 SFALTLSG-AVFGWGRNKFGQLGLNDENDRYVP 233



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + + P+ V AL  
Sbjct: 26 RRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKRPEQVGALDA 83

Query: 67 KNIRQVSAGRSHS 79
          +NI  VS G +H+
Sbjct: 84 QNIVAVSCGEAHT 96



 Score = 38.9 bits (89), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERV-VALNKVHVESVSCGLNHTVCIADKGKAVYAF 486
           +  +GN  +G+LG G      V  P R    LNK  V  V CGL HTV + D G  VY  
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKT-VRDVGCGLRHTVFVLDDG-TVYTC 58

Query: 487 GDGEYGKLGLGNTGLKP 503
           G  + G+LG   +  +P
Sbjct: 59  GCNDLGQLGHEKSRKRP 75


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  V+CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VY++G    G+LGL
Sbjct: 97  LALNDKGQ-VYSWGLDSDGQLGL 118



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV++WG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y++G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + QV+ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
           [Equus caballus]
          Length = 911

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 108 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 167

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 168 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 199



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +   P  + +L    +  + CG +HT
Sbjct: 56  VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHT 115

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 116 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 147



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 5/69 (7%)

Query: 18 VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE---PQLVLALSNKNIRQVSA 74
          V ++ G  H LA+S   +VF WG N   QLGLG  I+Y++   PQL+ +L      QV+A
Sbjct: 1  VQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--IDYKKQASPQLIKSLLGIPFMQVAA 58

Query: 75 GRSHSAAWT 83
          G +HS   T
Sbjct: 59 GGAHSFVLT 67



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 45  IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQK 104

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 105 IVYICCGEDHTAALT 119



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 3   VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAH 62

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 63  SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYFP 94



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R+ P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 85  LNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 144

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 145 NPRKVFELMGSIVTQIACGRQHTSAFV 171


>gi|351694729|gb|EHA97647.1| Putative E3 ubiquitin-protein ligase KIAA0614 [Heterocephalus glaber]
          Length = 4465

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 147/338 (43%), Gaps = 36/338 (10%)

Query: 105  PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
            P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 3963 PSDTADPRVACLSNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTPMYAHSIAALL 4020

Query: 164  HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
              +   +F     T+ + R +  T+     +  P +T+  L     + + +    F Q +
Sbjct: 4021 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLEIVGGEIRASENSYFCQAA 4079

Query: 220  RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
            RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 4080 RQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 4139

Query: 273  VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+A+R   PLPL L P  W
Sbjct: 4140 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAMRADVPLPLDLLPSFW 4195

Query: 332  KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI----IPLECFEGA--- 383
            K +V EP+    DLE+ D L    ++    I      EA   EI    + +E  EG    
Sbjct: 4196 KTLVGEPLDPDQDLEEADILTFNYIKKFESISEETELEALCAEIASQHLAIESPEGPNKP 4255

Query: 384  -------SWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
                   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 4256 CCRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 4292


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 270 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 329

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 330 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 361



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 218 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHT 277

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 278 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 309



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (3%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLAL- 64
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+  + + 
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMP 135

Query: 65  SNKNIRQVSAGRSHS-AAWTA 84
            +KNIR     ++ S  +W +
Sbjct: 136 VDKNIRIKECKKTASRKSWVS 156



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 202 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKS 261

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 262 LRSQKIVYICCGEDHTAALT 281



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 247 LNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 306

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 307 NPRKVFELMGSIVTQIACGRQHTSAFV 333



 Score = 38.5 bits (88), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG+G+T  + +P
Sbjct: 307 SAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSP 338



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+V AL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KRPEQVGALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + DKG+ VYA+G    G+LGL  T
Sbjct: 97  LTLNDKGQ-VYAWGFAADGQLGLPGT 121



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  ++ IV ++ G  H LA+S   +VF+WG N   QLGLG  +  +  PQL+ +L 
Sbjct: 129 RNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS A T
Sbjct: 189 GIPFGQIAAGGAHSFALT 206



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  GT    +VP  + +L+ V +  V+CG  
Sbjct: 88  AVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ KG  V+++G  ++G+LGLG    K T PQ
Sbjct: 148 HSLALS-KGSEVFSWGQNKHGQLGLGYDLKKQTSPQ 182



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G  HS  +T +G ++ +G   +G+LG     +  VP  + +L    +  +SCG +HT
Sbjct: 195 IAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +TG +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTGHEINPR 286



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H L +++ GQV+AWG  +D QLGL G +   R P+ + +LS
Sbjct: 76  EQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAAWT 83
           +  I QV+ G  HS A +
Sbjct: 136 DVQIVQVACGYYHSLALS 153



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I    I+ G  H  A++ +G VF WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +S G  H+AA T
Sbjct: 239 LRSQKIVYISCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 10/90 (11%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG---LGNQI 53
           ++  + R++P    + ++  IV IS G +H  A++  G VF +G     QLG    G++I
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEI 283

Query: 54  NYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
           N   P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 N---PRKVFELMGNIVTQIACGRQHTSAFV 310



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++++G   +G+LG G  +  +  P+ + +L  +    ++ G  H
Sbjct: 142 VACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G AV+ +G  ++G+LGL +   +  P
Sbjct: 202 SFALTLSG-AVFGWGRNKFGQLGLNDENDRYVP 233



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + + P+ V AL  
Sbjct: 26 RRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKRPEQVGALDA 83

Query: 67 KNIRQVSAGRSHS 79
          +NI  VS G +H+
Sbjct: 84 QNIVAVSCGEAHT 96



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERV-VALNKVHVESVSCGLNHTVCIADKGKAVYAF 486
           +  +GN  +G+LG G      V  P R    LNK  V  V CGL HTV + D G  VY  
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKT-VRDVGCGLRHTVFVLDDG-TVYTC 58

Query: 487 GDGEYGKLGLGNTGLKP 503
           G  + G+LG   +  +P
Sbjct: 59  GCNDLGQLGHEKSRKRP 75


>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 556

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 162 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKV-VVTIACGQM 220

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 221 CCMAVVDSGE-VYVWGYNGNGQLGLGNSGNQPTP 253



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V  +G +Y +G    G+
Sbjct: 182 GYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQ 241

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 242 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 300

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 301 NQSYPTP 307



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV ++G+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 202 RVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 262 IRVQRVACGYAHTLVLT 278



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 256 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 315

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 316 IEIAACHSTHTSA 328



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 247 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 306

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 174

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 175 DGE-VFAWGYNNSGQVGSGSTINQPIPR 201



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ IN   P+ V   L 
Sbjct: 149 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQ 208

Query: 66  NKNIRQVSAGR 76
           NK +  ++ G+
Sbjct: 209 NKVVVTIACGQ 219



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 95  RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 154

Query: 65  SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG--LPQDIPDHY-GHLQNKPLP 121
           SNK + +V+ G  HS   T+        G+  S  +  G  + Q IP    G LQNK + 
Sbjct: 155 SNKQVIEVACGSYHSLVLTSDG-EVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVV 213

Query: 122 LI 123
            I
Sbjct: 214 TI 215


>gi|402874538|ref|XP_003901092.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
           anubis]
          Length = 711

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
           I       IVD+S+G  H LA+S+  +V+AWGNNS  Q G GN      +P+ V  L   
Sbjct: 38  IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 97

Query: 68  NIRQVSAGRSHSAAWTAPP 86
            I+Q+SAG SHS AWTA P
Sbjct: 98  AIQQISAGTSHSLAWTALP 116


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G Y  G LGHG+  +  +P+R+   +  +HV  VSCG 
Sbjct: 355 VACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGP 414

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  +   G+ ++ FGDG +G LG G+      P+
Sbjct: 415 WHTAAVTSVGQ-LFTFGDGTFGALGHGDHSSATVPR 449



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+ +VT  G ++++G    GRLGHG   +   P+ +  L  +++E V+CG NHT
Sbjct: 303 IACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDTLAGMNIELVACGENHT 362

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGNTGLKPTPQ 506
             +   G  +Y +GDG Y  G LG G+      P+
Sbjct: 363 CAVTFSGD-LYTWGDGAYNCGLLGHGSEASHWIPK 396



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 16/100 (16%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG  H+A VTS G L+TFG+G +G LGHG   +  VP  V  L  +    VSCG+ HT
Sbjct: 410 VSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPREVETLRGLRTIRVSCGVWHT 469

Query: 474 VCIADK---------------GKAVYAFGDGEYGKLGLGN 498
               +                GK ++ +G+G+  +LG G+
Sbjct: 470 AAAVEITTESSSPGGSGSSTFGK-LFTWGNGDEYRLGHGD 508



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 1/68 (1%)

Query: 428 GYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G L+T+GNGD  RLGHG       PE VVAL   ++  V+CG N T+ +   G+ VY  G
Sbjct: 491 GKLFTWGNGDEYRLGHGDKEPRLFPECVVALGDENICQVACGHNLTLALTAAGR-VYTMG 549

Query: 488 DGEYGKLG 495
              YG+LG
Sbjct: 550 STSYGQLG 557



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 35/64 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   +YT+G G  G+LGHG   +   P  V  L    V +V+CG N T
Sbjct: 581 IACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAVACGSNFT 640

Query: 474 VCIA 477
             I 
Sbjct: 641 AIIC 644



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 37/64 (57%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I+ G  H + V+  G++F+WG  S  +LG G + +   P+L+  L+  NI  V+ G +H+
Sbjct: 303 IACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDTLAGMNIELVACGENHT 362

Query: 80  AAWT 83
            A T
Sbjct: 363 CAVT 366



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH---VESVSCGL 470
           +ACG   +  +T+ G +YT G+  YG+LG+      KVP   +   K+    +E ++CG 
Sbjct: 529 VACGHNLTLALTAAGRVYTMGSTSYGQLGNPRATG-KVP--AIVEGKIAGKIIEEIACGS 585

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            H   +  K + VY +G G  G+LG G+   +  P
Sbjct: 586 YHVAVLTSKAE-VYTWGKGTNGQLGHGDNKDRNQP 619



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 39/64 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I +I+ G+ HV  +++  +V+ WG  ++ QLG G+  +  +P +V  L +K +R V+ G 
Sbjct: 578 IEEIACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAVACGS 637

Query: 77  SHSA 80
           + +A
Sbjct: 638 NFTA 641



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 15/98 (15%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAV---------------SNTGQVFAWGNNSDAQ 46
           S T  R +   + +  + +S G  H  A                S  G++F WGN  + +
Sbjct: 444 SATVPREVETLRGLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYR 503

Query: 47  LGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
           LG G++     P+ V+AL ++NI QV+ G + + A TA
Sbjct: 504 LGHGDKEPRLFPECVVALGDENICQVACGHNLTLALTA 541



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  +S G  H  AV++ GQ+F +G+ +   LG G+  +   P+ V  L      +
Sbjct: 402 MEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPREVETLRGLRTIR 461

Query: 72  VSAGRSHSAA 81
           VS G  H+AA
Sbjct: 462 VSCGVWHTAA 471


>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
           GTPase regulator-like [Equus caballus]
          Length = 915

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T N  +YTFG G +G+LG GT       P  +  +    +  +SCG NH
Sbjct: 248 VACGGGHTVVLTENA-VYTFGLGQFGQLGLGTFIFETSEPTVIEHIKDQKISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDTG-LIYTFGDGRHGKLGLG 330



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +ACG +H+AVVT N  LY FG+ ++G+LG G+      P  + AL    V+ V+CG  H
Sbjct: 39  CLACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTH 98

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T+ +A +G  VYA G    G+LGLG+
Sbjct: 99  TI-VATEGGKVYATGGNSEGQLGLGD 123



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 57/86 (66%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           ++CG+ HSA +T+ G LYTFG  + G+LG  + +  N ++P+ V  + +  ++ V+CG  
Sbjct: 195 VSCGYYHSAFITTEGELYTFGEPESGKLGLPSKLLINHRIPQLVPGIPEKVIQ-VACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  VP    +  +  V+ V+CG  
Sbjct: 300 ISCGENHTALITDTGLIYTFGDGRHGKLGLGLENFTNQFVPTLCCSSRRFIVQLVACGGC 359

Query: 472 HTVCIA 477
           H +  A
Sbjct: 360 HMLVFA 365



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 3/81 (3%)

Query: 6   GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
             +IP+   FKN   + ++ G EH   V+   +++ +G+N+  QLGLG++    +P  + 
Sbjct: 23  AENIPSKFWFKNDIPICLACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIK 82

Query: 63  ALSNKNIRQVSAGRSHSAAWT 83
           AL  + ++ V+ GR+H+   T
Sbjct: 83  ALKPEKVKFVACGRTHTIVAT 103


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +AI+CG  H+A+VTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 420 SAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVW 479

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGK-IFTWGDGDKGRLGHGDKDTRLVP 524



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+GNG  + G LGHG  ++  VP+RV   L  +HV ++SCG 
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGP 426

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 427 WHTAIVTSAGQ-LFTFGDGSFGVLGHGD 453



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA +L      I+CG +H+ +VT  G +Y++G    GRLGHG   +   P+ + AL 
Sbjct: 303 PLEFAVKLDVQN--ISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +G+G    G LG GN
Sbjct: 361 NMNIELVACGEYHTCAVTLSGD-LYTWGNGTSNSGLLGHGN 400



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     IACG   +  +T++G++YT G+  YG+LG+    +  +P RV   
Sbjct: 523 VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGK 581

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE +SCG  H   +  + + VY +G G  G+LG G+T  + +P
Sbjct: 582 LHKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRSSP 628



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 399 VPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P+    +L + +   I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V A
Sbjct: 574 LPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEA 633

Query: 458 LNKVHVESVSCGLNHTVCIA 477
           L    V +V CG+N T  I 
Sbjct: 634 LKDKQVRTVVCGINFTAAIC 653



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS G  H   V+  G++++WG  S  +LG G   +  +P+L+ AL+N NI  V+ 
Sbjct: 310 LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVAC 369

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 370 GEYHTCAVT 378



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG      VP  V AL + +
Sbjct: 475 ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPN 534

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              ++CG   TV +   G  VY  G   YG+LG
Sbjct: 535 FCQIACGHCMTVALTTSGH-VYTMGSPVYGQLG 566



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K +R V  G 
Sbjct: 587 VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGI 646

Query: 77  SHSAA 81
           + +AA
Sbjct: 647 NFTAA 651



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQ--LGLGNQINYREPQLVLA-LS 65
           I A  N++I  ++ G  H  AV+ +G ++ WGN +     LG GN++++  P+ V   L 
Sbjct: 356 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 415

Query: 66  NKNIRQVSAGRSHSAAWTA 84
             ++  +S G  H+A  T+
Sbjct: 416 GIHVSAISCGPWHTAIVTS 434



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 414 LEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVR 473

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 474 AACGVWHTAA 483



 Score = 38.9 bits (89), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 85/228 (37%), Gaps = 46/228 (20%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  V  + G  H  AV             ++G++F WG+    +LG G++  
Sbjct: 461 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDT 520

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGH 114
              P  V AL   N  Q++ G   + A T       T GH       +G P  +    G+
Sbjct: 521 RLVPTCVAALVEPNFCQIACGHCMTVALT-------TSGHV----YTMGSP--VYGQLGN 567

Query: 115 LQNKPLPLIRARLKLLNRFSDLI----YQVVRLLPLGNVDQDWVQCTPYSW-------LV 163
            Q   +  +R   KL   F + I    Y V  L     V         Y+W       L 
Sbjct: 568 PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEV---------YTWGKGANGRLG 618

Query: 164 HPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTV 211
           H       +P +      + V +T++ G NF  ++ + +  +   Q++
Sbjct: 619 HGDTDDRSSPTLVEALKDKQV-RTVVCGINFTAAICIHKWVSGVDQSM 665


>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
          Length = 953

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 143 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHT 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 203 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 234



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 25  RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 84

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 85  GIPFMQVAAGGAHSFVLT 102



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 91  VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 150

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 151 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 182



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 75  TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 134

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 135 LRSQKIVYICCGEDHTAALT 154



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 38  VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 97

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 98  SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 129



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 120 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 179

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + +++ GR H++A+ 
Sbjct: 180 NPRKVFELMGSIVTEIACGRQHTSAFV 206


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  VT  G LYT+G+G +  G LGHG+ ++  +P+R+  +L  +HV SVSCG 
Sbjct: 344 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 403

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   G+ ++ FGDG +G LG G+
Sbjct: 404 WHTALITSYGR-LFTFGDGTFGVLGHGD 430



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 16/121 (13%)

Query: 399 VPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P   A  L+  + A+++CG  H+A++TS G L+TFG+G +G LGHG     + P  V +
Sbjct: 383 IPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVES 442

Query: 458 LNKVHVESVSCGLNHTVCIAD------------KGKAVYAFGDGEYGKLGLGNTG--LKP 503
           L+ +   +VSCG+ HT  + +             GK ++ +GDG+  +LG G+    LKP
Sbjct: 443 LSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGK-LFTWGDGDKNRLGHGDKDPRLKP 501

Query: 504 T 504
           T
Sbjct: 502 T 502



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 2/97 (2%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G++  G++  + T G+ +P    ++L   +   I+CG  H A +TS   +YT+G G  GR
Sbjct: 535 GSTVYGQLGNLQTDGK-LPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGR 593

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           LGHG   + KVP  V AL   HV+ ++CG N+T  I 
Sbjct: 594 LGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAIC 630



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV-HVESVSCGLNH 472
           IACG +H+A VT  G ++T+G    GRLGHG   +   P  V +L     V+ V+CG  H
Sbjct: 291 IACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFH 350

Query: 473 TVCIADKGKAVYAFGDGEY--GKLGLGN 498
           T  +   G+ +Y +GDG +  G LG G+
Sbjct: 351 TCAVTLAGE-LYTWGDGTHNVGLLGHGS 377



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVES 465
           + Y    IACG   +  +T++G ++T G+  YG+LG+  T + K+P  V   L    VE 
Sbjct: 508 IDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEE 566

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +SCG  H   +  + + VY +G G  G+LG G+   +  P
Sbjct: 567 ISCGAYHVAALTSRNE-VYTWGKGANGRLGHGDLEDRKVP 605



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 13/95 (13%)

Query: 413 AIACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           A++CG  H+A V              +G L+T+G+GD  RLGHG       P  V AL  
Sbjct: 450 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 509

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            +   ++CG + TV +   G+ V+  G   YG+LG
Sbjct: 510 YNFHKIACGHSLTVGLTTSGQ-VFTMGSTVYGQLG 543



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 43/65 (66%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV A+++  +V+ WG  ++ +LG G+  + + P +V AL +++++ ++ G 
Sbjct: 564 VEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGS 623

Query: 77  SHSAA 81
           +++AA
Sbjct: 624 NYTAA 628



 Score = 38.5 bits (88), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS-NKNIRQVS 73
           + +  I+ G  H   V+  G++F WG  S  +LG G   +   P+LV +L+   ++  V+
Sbjct: 286 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVA 345

Query: 74  AGRSHSAAWT 83
            G  H+ A T
Sbjct: 346 CGEFHTCAVT 355


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + DKG+ VYA+G    G+LGL  T
Sbjct: 97  LALNDKGQ-VYAWGLDTDGQLGLPGT 121



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV I+ G  H LA+S   +VF+WG N   QLGLG ++  +  PQL+ +L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFTQVAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  GT    +VP  + +L  + +  ++CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H++ ++ KG  V+++G  ++G+LGLG
Sbjct: 147 YHSLALS-KGSEVFSWGQNKHGQLGLG 172



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG ++D QLGL G +   R P+ + +L+
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLT 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I Q++ G  HS A
Sbjct: 136 DIQIVQIACGYYHSLA 151



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           QS P    + L      +A G  HS V+T +G ++ +G   +G+LG     +  VP  + 
Sbjct: 178 QSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK 237

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +L    +  + CG +HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           +S + I +   I    ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           IACG+ HS  ++    ++++G   +G+LG G  +  +  P+ + +L  +    V+ G  H
Sbjct: 142 IACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRFVP 233



 Score = 42.0 bits (97), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 38/74 (51%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + ++  IV I  G +H  A++  G VF +G     QLG  +  +   P+ V  L    
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 69  IRQVSAGRSHSAAW 82
           + Q++ GR H++A+
Sbjct: 296 VTQIACGRQHTSAF 309



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V+ V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  VT  G LYT+G+G +  G LGHG+ ++  +P+R+  +L  +HV SVSCG 
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   G+ ++ FGDG +G LG G+
Sbjct: 399 WHTALITSYGR-LFTFGDGTFGVLGHGD 425



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 16/121 (13%)

Query: 399 VPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P   A  L+  + A+++CG  H+A++TS G L+TFG+G +G LGHG     + P  V +
Sbjct: 378 IPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVES 437

Query: 458 LNKVHVESVSCGLNHTVCIAD------------KGKAVYAFGDGEYGKLGLGNTG--LKP 503
           L+ +   +VSCG+ HT  + +             GK ++ +GDG+  +LG G+    LKP
Sbjct: 438 LSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGK-LFTWGDGDKNRLGHGDKDPRLKP 496

Query: 504 T 504
           T
Sbjct: 497 T 497



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 2/97 (2%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G++  G++  + T G+ +P    ++L   +   I+CG  H A +TS   +YT+G G  GR
Sbjct: 530 GSTVYGQLGNLQTDGK-LPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGR 588

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           LGHG   + KVP  V AL   HV+ ++CG N+T  I 
Sbjct: 589 LGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAIC 625



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV-HVESVSCGLNH 472
           IACG +H+A VT  G ++T+G    GRLGHG   +   P  V +L     V+ V+CG  H
Sbjct: 286 IACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFH 345

Query: 473 TVCIADKGKAVYAFGDGEY--GKLGLGN 498
           T  +   G+ +Y +GDG +  G LG G+
Sbjct: 346 TCAVTLAGE-LYTWGDGTHNVGLLGHGS 372



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVES 465
           + Y    IACG   +  +T++G ++T G+  YG+LG+  T + K+P  V   L    VE 
Sbjct: 503 IDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEE 561

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +SCG  H   +  + + VY +G G  G+LG G+   +  P
Sbjct: 562 ISCGAYHVAALTSRNE-VYTWGKGANGRLGHGDLEDRKVP 600



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 13/95 (13%)

Query: 413 AIACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           A++CG  H+A V              +G L+T+G+GD  RLGHG       P  V AL  
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 504

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            +   ++CG + TV +   G+ V+  G   YG+LG
Sbjct: 505 YNFHKIACGHSLTVGLTTSGQ-VFTMGSTVYGQLG 538



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 43/65 (66%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV A+++  +V+ WG  ++ +LG G+  + + P +V AL +++++ ++ G 
Sbjct: 559 VEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGS 618

Query: 77  SHSAA 81
           +++AA
Sbjct: 619 NYTAA 623



 Score = 38.5 bits (88), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS-NKNIRQVS 73
           + +  I+ G  H   V+  G++F WG  S  +LG G   +   P+LV +L+   ++  V+
Sbjct: 281 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVA 340

Query: 74  AGRSHSAAWT 83
            G  H+ A T
Sbjct: 341 CGEFHTCAVT 350


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 14/107 (13%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H+AVVTS G L+TFG+G +G LGHG  +    P  V  L  +    V+CG+ HT
Sbjct: 402 ISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHT 461

Query: 474 VC-------IADKG-------KAVYAFGDGEYGKLGLGNTGLKPTPQ 506
                    ++D G       + +Y +GDG+ G+LG G+   +  P+
Sbjct: 462 AAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPE 508



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G  +YG LGHG+ ++  +P++V   +  + V  +SCG 
Sbjct: 347 VACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGA 406

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 407 WHTAVVTSAGQ-LFTFGDGSFGALGHGD 433



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+ +VT  G ++++G    GRLGHG   +   P+ +  L+  +VE V+CG  HT
Sbjct: 295 IACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHT 354

Query: 474 VCIADKGKAVYAFGDG--EYGKLGLGNTGLKPTPQ 506
             +   G  +Y +GDG   YG LG G+      PQ
Sbjct: 355 CAVTLSGD-LYTWGDGTHNYGLLGHGSEVSHWIPQ 388



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 16/97 (16%)

Query: 414 IACGFKHSAVVT---------------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +ACG  H+A                  S+  LYT+G+GD GRLGHG      VPE V AL
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            +  +  V+CG + TV +   G+ VY  G   YG+LG
Sbjct: 514 MEERICQVACGNDLTVALTTAGR-VYTMGSTAYGQLG 549



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T+ G +YT G+  YG+LG   T N K+P  V   
Sbjct: 506 VPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLG-SATANGKLPTCVEGE 564

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +    VE V+CG  H   +  K + VY +G G  G+LG G+   + TP
Sbjct: 565 IANSFVEEVACGSYHVAVLTSKNE-VYTWGKGLNGQLGHGDNNHRNTP 611



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 36/64 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H AV+TS   +YT+G G  G+LGHG   +   P  V  L    V++V+CG   T
Sbjct: 573 VACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFT 632

Query: 474 VCIA 477
           V I 
Sbjct: 633 VVIC 636



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I+ G  H + V+  G++F+WG  S  +LG G + +   P+++  LS  N+  V+ G  H+
Sbjct: 295 IACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHT 354

Query: 80  AAWT 83
            A T
Sbjct: 355 CAVT 358



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 35/62 (56%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N  + +++ G+ HV  +++  +V+ WG   + QLG G+  +   P +V  L +K ++ V+
Sbjct: 567 NSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVA 626

Query: 74  AG 75
            G
Sbjct: 627 CG 628


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + DKG+ VYA+G    G+LGL  T
Sbjct: 97  LALNDKGQ-VYAWGLDTDGQLGLPGT 121



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV I+ G  H LA+S   +VF+WG N   QLGLG ++  +  PQL+ +L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFTQVAAGGAHSFVLT 206



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  GT    +VP  + +L  + +  ++CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H++ ++ KG  V+++G  ++G+LGLG
Sbjct: 147 YHSLALS-KGSEVFSWGQNKHGQLGLG 172



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG ++D QLGL G +   R P+ + +L+
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLT 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I Q++ G  HS A
Sbjct: 136 DIQIVQIACGYYHSLA 151



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           QS P    + L      +A G  HS V+T +G ++ +G   +G+LG     +  VP  + 
Sbjct: 178 QSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK 237

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +L    +  + CG +HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           +S + I +   I    ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           IACG+ HS  ++    ++++G   +G+LG G  +  +  P+ + +L  +    V+ G  H
Sbjct: 142 IACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRFVP 233



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 38/74 (51%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + ++  IV I  G +H  A++  G VF +G     QLG  +  +   P+ V  L    
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 69  IRQVSAGRSHSAAW 82
           + Q++ GR H++A+
Sbjct: 296 VTQIACGRQHTSAF 309



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V+ V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  VT+ G LYT+G+G +  G LGHGT +   +P R+  AL  + V  VSCG 
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGT 193

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  I   G+ ++ FGDG +G LG GN      P+
Sbjct: 194 WHTALITSMGQ-LFTFGDGSFGVLGHGNVKSISCPR 228



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 11/121 (9%)

Query: 396 GQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           G  +P   +  L+  + A ++CG  H+A++TS G L+TFG+G +G LGHG   +   P  
Sbjct: 170 GHWIPRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPRE 229

Query: 455 VVALNKVHVESVSCGLNHTVCIAD----------KGKAVYAFGDGEYGKLGLGNTGLKPT 504
           V +L+ +   +V+CG+ HT  I +              ++ +GDG+  +LG G+   +  
Sbjct: 230 VESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLN 289

Query: 505 P 505
           P
Sbjct: 290 P 290



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+++VT +G ++T+G    GRLGHGT  +   P  V +L   +++ V+CG  HT
Sbjct: 82  VDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHT 141

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             +   G+ +Y +GDG +  G LG G
Sbjct: 142 CAVTTTGE-LYTWGDGTHNVGLLGHG 166



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H +V+TS   ++T+G G  GRLGHG   + KVP  V AL    V  ++CG N T
Sbjct: 355 VACGSYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSVRHIACGANFT 414

Query: 474 VCIA 477
             I 
Sbjct: 415 AAIC 418



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 12/102 (11%)

Query: 413 AIACGFKHSAVVT-----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A+ACG  H+A +            S G L+T+G+GD  RLGHG       P  V +L   
Sbjct: 240 AVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDY 299

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
               V+CG + TV +   GK V+  G+  YG+LG  N+  +P
Sbjct: 300 DFYRVACGHSLTVGLTTSGK-VWTMGNSVYGQLGNPNSDGRP 340



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 44/68 (64%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N H++ ++ G+ HV  +++  +VF WG  ++ +LG G+  + + P LV AL ++++R ++
Sbjct: 349 NEHVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSVRHIA 408

Query: 74  AGRSHSAA 81
            G + +AA
Sbjct: 409 CGANFTAA 416



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  +  G  H   V+ +G+VF WG +S  +LG G + +   P+LV +L+  NI  V+ 
Sbjct: 77  LDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVAC 136

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 137 GEFHTCAVT 145



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 6/108 (5%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN--WKVPERVVA 457
           P   A+ + Y    +ACG   +  +T++G ++T GN  YG+LG+  +      V +++  
Sbjct: 290 PTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVGDKIT- 348

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               HV  V+CG  H   +  + + V+ +G G  G+LG G+   +  P
Sbjct: 349 --NEHVLQVACGSYHVSVLTSRSE-VFTWGKGANGRLGHGDIEDQKVP 393


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + DKG+ VYA+G    G+LGL  T
Sbjct: 97  LALNDKGQ-VYAWGLDTDGQLGLPGT 121



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALS 65
           R+I +  +I IV I+ G  H LA+S   +VF+WG N   QLGLG ++  +  PQL+ +L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  GT    KVP  + +L  + +  ++CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H++ ++ KG  V+++G  ++G+LGLG
Sbjct: 147 YHSLALS-KGSEVFSWGQNKHGQLGLG 172



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           QS P    + L      +A G  HS V+T +G ++ +G   +G+LG     +  VP  + 
Sbjct: 178 QSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK 237

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +L    +  + CG +HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG ++D QLGL G +   + P+ + +L+
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLT 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I Q++ G  HS A
Sbjct: 136 DIQIVQIACGYYHSLA 151



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L ++ 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           IACG+ HS  ++    ++++G   +G+LG G  +  +  P+ + +L  +    V+ G  H
Sbjct: 142 IACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRFVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + ++  IV I  G +H  A++  G VF +G     QLG  +  +   P+ V  L    
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 69  IRQVSAGRSHSAAWT 83
           + Q++ GR H++A+ 
Sbjct: 296 VTQIACGRQHTSAFV 310



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V+ V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  VT  G LYT+G+G +  G LGHG+ ++  +P+R+  +L  +HV SVSCG 
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   G+ ++ FGDG +G LG G+
Sbjct: 399 WHTALITSYGR-LFTFGDGTFGVLGHGD 425



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 16/121 (13%)

Query: 399 VPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P   A  L+  + A+++CG  H+A++TS G L+TFG+G +G LGHG     + P  V +
Sbjct: 378 IPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVES 437

Query: 458 LNKVHVESVSCGLNHTVCIAD------------KGKAVYAFGDGEYGKLGLGNTG--LKP 503
           L+ +   +VSCG+ HT  + +             GK ++ +GDG+  +LG G+    LKP
Sbjct: 438 LSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGK-LFTWGDGDKNRLGHGDKDPRLKP 496

Query: 504 T 504
           T
Sbjct: 497 T 497



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 2/97 (2%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G++  G++  + T G+ +P    ++L   +   I+CG  H A +TS   +YT+G G  GR
Sbjct: 530 GSTVYGQLGNLQTDGK-LPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGR 588

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           LGHG   + KVP  V AL   HV+ ++CG N+T  I 
Sbjct: 589 LGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAIC 625



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV-HVESVSCGLNH 472
           IACG +H+A VT  G ++T+G    GRLGHG   +   P  V +L     V+ V+CG  H
Sbjct: 286 IACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFH 345

Query: 473 TVCIADKGKAVYAFGDGEY--GKLGLGN 498
           T  +   G+ +Y +GDG +  G LG G+
Sbjct: 346 TCAVTLAGE-LYTWGDGTHNVGLLGHGS 372



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVES 465
           + Y    IACG   +  +T++G ++T G+  YG+LG+  T + K+P  V   L    VE 
Sbjct: 503 IDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEE 561

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +SCG  H   +  + + VY +G G  G+LG G+   +  P
Sbjct: 562 ISCGAYHVAALTSRNE-VYTWGKGANGRLGHGDLEDRKVP 600



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 13/95 (13%)

Query: 413 AIACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           A++CG  H+A V              +G L+T+G+GD  RLGHG       P  V AL  
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 504

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            +   ++CG + TV +   G+ V+  G   YG+LG
Sbjct: 505 YNFHKIACGHSLTVGLTTSGQ-VFTMGSTVYGQLG 538



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 43/65 (66%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV A+++  +V+ WG  ++ +LG G+  + + P +V AL +++++ ++ G 
Sbjct: 559 VEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGS 618

Query: 77  SHSAA 81
           +++AA
Sbjct: 619 NYTAA 623



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS-NKNIRQVS 73
           + +  I+ G  H   V+  G++F WG  S  +LG G   +   P+LV +L+   ++  V+
Sbjct: 281 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVA 340

Query: 74  AGRSHSAAWT 83
            G  H+ A T
Sbjct: 341 CGEFHTCAVT 350


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS   T
Sbjct: 189 GIPFMQIAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
           H++ ++ K   V+ +G  +YG+LGLG +   + +PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + I+ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    ++ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS   T
Sbjct: 189 GIPFMQIAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
            H++ ++ K   V+ +G  +YG+LGLG +   + +PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + I+ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    ++ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + DKG+ VYA+G    G+LGL  T
Sbjct: 97  LALNDKGQ-VYAWGLDTDGQLGLPGT 121



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV I+ G  H LA+S   +VF+WG N   QLGLG ++  +  PQL+ +L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFTQVAAGGAHSFVLT 206



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  GT    +VP  + +L  + +  ++CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H++ ++ KG  V+++G  ++G+LGLG
Sbjct: 147 YHSLALS-KGSEVFSWGQNKHGQLGLG 172



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG ++D QLGL G +   R P+ + +L+
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLT 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I Q++ G  HS A
Sbjct: 136 DIQIVQIACGYYHSLA 151



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           QS P    + L      +A G  HS V+T +G ++ +G   +G+LG     +  VP  + 
Sbjct: 178 QSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK 237

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +L    +  + CG +HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           +S + I +   I    ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           IACG+ HS  ++    ++++G   +G+LG G  +  +  P+ + +L  +    V+ G  H
Sbjct: 142 IACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRFVP 233



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 38/74 (51%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + ++  IV I  G +H  A++  G VF +G     QLG  +  +   P+ V  L    
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 69  IRQVSAGRSHSAAW 82
           + Q++ GR H++A+
Sbjct: 296 VTQIACGRQHTSAF 309



 Score = 39.3 bits (90), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V+ V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|8778856|gb|AAF79855.1|AC000348_8 T7N9.12 [Arabidopsis thaliana]
          Length = 441

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 5/111 (4%)

Query: 396 GQSVPLTFANRLQYYEAAI----ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV 451
           G  + +T    + +++ ++    A G+ HS  V+ +G ++T GNG +G+LGHG T++   
Sbjct: 110 GDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLST 169

Query: 452 PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           P +V   N   V+ V+CG+ H++ +   G  V  FG G+ G+LG  +  +K
Sbjct: 170 PAKVSHFNNDSVKMVACGMRHSLVLF-AGNQVCGFGSGKRGQLGFSSDRIK 219



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 1/80 (1%)

Query: 426 SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYA 485
           + G ++T+G G  G+LGHG  +N  +P+ V   +   +   + G +H+  ++D G  ++ 
Sbjct: 92  AGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSG-CIFT 150

Query: 486 FGDGEYGKLGLGNTGLKPTP 505
            G+G +G+LG G+T    TP
Sbjct: 151 CGNGSFGQLGHGDTLSLSTP 170



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 3/97 (3%)

Query: 34  GQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPG 93
           G+VF WG  S  QLG G+ +N   P+LV    +  I Q +AG SHS  + +      T G
Sbjct: 94  GKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHS-GFVSDSGCIFTCG 152

Query: 94  HTPSSSLRLG--LPQDIPDHYGHLQNKPLPLIRARLK 128
           +     L  G  L    P    H  N  + ++   ++
Sbjct: 153 NGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMR 189



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 36/71 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +  F +  I   + G  H   VS++G +F  GN S  QLG G+ ++   P  V   +N +
Sbjct: 121 VSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDS 180

Query: 69  IRQVSAGRSHS 79
           ++ V+ G  HS
Sbjct: 181 VKMVACGMRHS 191


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V+ V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
          Length = 947

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 137 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHT 196

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 197 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 228



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
          R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 19 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 78

Query: 66 NKNIRQVSAGRSHSAAWT 83
               QV+AG +HS   T
Sbjct: 79 GIPFMQVAAGGAHSFVLT 96



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 85  VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 144

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 145 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 176



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 69  TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 128

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 129 LRSQKIVYICCGEDHTAALT 148



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 32  VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 91

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 92  SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 123



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 114 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 173

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + +++ GR H++A+ 
Sbjct: 174 NPRKVFELMGSIVTEIACGRQHTSAFV 200


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS   T
Sbjct: 189 GIPFMQIAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
            H++ ++ K   V+ +G  +YG+LGLG +   + +PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + I+ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    ++ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS   T
Sbjct: 189 GIPFMQIAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
            H++ ++ K   V+ +G  +YG+LGLG +   + +PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + I+ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    ++ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +L+
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLA 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 2/87 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L  + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H++ ++ K   V+ +G  +YG+LGLG
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLG 172



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  P+L+ +L 
Sbjct: 129 RNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L ++ I  +  
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICC 249

Query: 75  GRSHSAAWT 83
           G  H+AA T
Sbjct: 250 GEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H+AV+T  G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 306 ISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHT 365

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 366 LAFVPSSGLIYAFGCGIKGQLGSGHT 391



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    +   PE++ AL   H+  V+CG +H+
Sbjct: 98  VACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGS--KPEQIGALADQHIIHVACGESHS 155

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 156 LALSDQGR-LFSWGAGSDGQLGLTTT 180



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 1/84 (1%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
            G+    I A  + HI+ ++ G  H LA+S+ G++F+WG  SD QLGL   + +   P+L
Sbjct: 130 EGSKPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRL 189

Query: 61  VLALSNKNIRQVSAGRSHSAAWTA 84
           +  L+ + I QVS G  H  A  A
Sbjct: 190 IKKLNQEMILQVSCGNWHCLALAA 213



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 148 VACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWH 207

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
            + +A  G+  +A+G   +G+LGLG 
Sbjct: 208 CLALAADGQ-FFAWGQNSHGQLGLGK 232



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ FAWG NS  QLGLG +  +   PQ V +L 
Sbjct: 188 RLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLD 247

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 248 GIPLAQVAAGGAHSFA 263



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 41/82 (50%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S  S + + +   I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V
Sbjct: 236 SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHV 295

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
             L  + +  +S G  H+A  T
Sbjct: 296 KLLRTQKVVYISCGSDHTAVLT 317



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G++H   ++ TG VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 294 HVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGS 353

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 354 EVSQIACGRQHTLAF 368



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G    G+LG     + + P  V  L    V  +SCG +
Sbjct: 252 AQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSD 311

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 312 HTAVLTKTG-GVFTFGAGSCGQLG 334



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 412 AAIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           + IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H E VS
Sbjct: 356 SQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKGHWAAHNEPVS 412


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS   T
Sbjct: 189 GIPFMQIAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
            H++ ++ K   V+ +G  +YG+LGLG +   + +PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + I+ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    ++ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + +++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG +   +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIECQKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.1 bits (105), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIIQVACGYYHSLA 151



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I I+ ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|348533602|ref|XP_003454294.1| PREDICTED: protein RCC2 homolog [Oreochromis niloticus]
          Length = 494

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 1/79 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           HS  +T+ G L+++G  D G+LGHG T   + P+ + AL +  + SV+CG NHT+ + + 
Sbjct: 133 HSLFITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEALAEHVIVSVACGRNHTLALTED 192

Query: 480 GKAVYAFGDGEYGKLGLGN 498
           G AVY+FG+ + G+LG GN
Sbjct: 193 G-AVYSFGENKLGQLGQGN 210



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  H+  +T +G +Y+FG    G+LG G   +  +   +++ N   +  V+CG   
Sbjct: 178 SVACGRNHTLALTEDGAVYSFGENKLGQLGQGNQTDAVLTPALISYNGQPLVKVACGAEF 237

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           ++ +  KG  +Y+FG  EYG+LG  + G
Sbjct: 238 SMVVDCKGN-LYSFGCPEYGQLGHNSDG 264



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 25/106 (23%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW------------KVPERVVALNK- 460
           +ACG + S VV   G LY+FG  +YG+LGH +   +             +P RV    + 
Sbjct: 231 VACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEK 290

Query: 461 -----------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
                      V V  V+CG NHT+ + D  K V+ +G G YG+LG
Sbjct: 291 SKDGQIMPVPNVVVRDVACGANHTL-VLDSQKRVFTWGFGGYGRLG 335



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
           H L ++  G++++WG N   QLG G+      P+L+ AL+   I  V+ GR+H+ A T
Sbjct: 133 HSLFITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEALAEHVIVSVACGRNHTLALT 190



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +ACG  H+ V+ S   ++T+G G YGRLGH    +  VP R+V L
Sbjct: 307 VACGANHTLVLDSQKRVFTWGFGGYGRLGHTEQKDEMVP-RLVKL 350



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 37/71 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A     IV ++ G  H LA++  G V+++G N   QLG GNQ +      +++ + + 
Sbjct: 168 IEALAEHVIVSVACGRNHTLALTEDGAVYSFGENKLGQLGQGNQTDAVLTPALISYNGQP 227

Query: 69  IRQVSAGRSHS 79
           + +V+ G   S
Sbjct: 228 LVKVACGAEFS 238


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V+ V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  V+CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +V+CG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A+ACG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGIDCQKQTSPQ 182



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV ++ G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  V+ G +H+ A
Sbjct: 84 QNIVAVACGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + QV+ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P R        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 42.0 bits (97), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + +++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 5/123 (4%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L+  L+
Sbjct: 76  EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLN 135

Query: 66  NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLP---QDIPDHYGHLQNKPLPL 122
            + I QVS G  H  A  A      T G      L LG     Q  P     L+  PL  
Sbjct: 136 QQTILQVSCGNWHCLALAADG-QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ 194

Query: 123 IRA 125
           + A
Sbjct: 195 VAA 197



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
            + +A  G+  + +G   +G+LGLG 
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLGK 173



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 21/160 (13%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSL--RLGLPQDIPDHYGHLQNKPLP---- 121
            + Q++ GR H+ A+             PSS L    G         GH  N   P    
Sbjct: 295 EVTQIACGRQHTLAF------------VPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342

Query: 122 --LIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPY 159
                   +L  R     Y +V+ +  G  DQ +V C+ Y
Sbjct: 343 GYWAAHSGQLSARADRFKYHIVKQIFSGG-DQTFVLCSKY 381



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V  L  
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRT 241

Query: 67  KNIRQVSAGRSHSAAWT 83
           + +  +S G  H+A  T
Sbjct: 242 QKVVYISCGEEHTAVLT 258



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF+WG N   QLGLG   N +  PQL+ +L+
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLT 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
            H++ ++ K   V+++G  +YG+LGLG +   + +PQ
Sbjct: 147 YHSLALS-KASEVFSWGQNKYGQLGLGIDCNKQASPQ 182



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++++G   YG+LG G   N +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
            H++ ++ K   V+ +G  +YG+LGLG +   + +PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
           +A G  HSA VT+ G LYT+G G YGRLGH  + +   P+ V AL    V  ++CG    
Sbjct: 164 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 223

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            T+C+ D    V+++GDG+YGKLG G +
Sbjct: 224 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 250



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 1/111 (0%)

Query: 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           G  VP+   +        + CG + S  +T +G +YT+G GDY RLGHG+  + + P +V
Sbjct: 252 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 311

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             L    V +++ G  H VC  + G+ VY +GD + G+LG G T     P+
Sbjct: 312 QGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 361



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 44/77 (57%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +   +   ++ I+ G+ H +  +  G+V+ WG+N + QLG G     + P+LV AL  
Sbjct: 309 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 368

Query: 67  KNIRQVSAGRSHSAAWT 83
           K + +V+ G +H+ AW+
Sbjct: 369 KKVNRVACGSAHTLAWS 385



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           IACG     +  +T +  ++++G+GDYG+LG G +   KVP ++ +L  + V  V CG  
Sbjct: 216 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 275

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +V +   G AVY +G G+Y +LG G+
Sbjct: 276 FSVALTKSG-AVYTWGKGDYHRLGHGS 301



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + A+  G KH   ++S G +Y++G  + G+LGHG       P  + +L  + V  V+ G 
Sbjct: 109 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 168

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLG 495
            H+ C+   G  +Y +G G YG+LG
Sbjct: 169 AHSACVTAAGD-LYTWGKGRYGRLG 192



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 43/71 (60%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I  V ++ G +H LA+S+ G+V++WG   D +LG GN+     P+++ +L    +  V+A
Sbjct: 107 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 166

Query: 75  GRSHSAAWTAP 85
           G +HSA  TA 
Sbjct: 167 GGAHSACVTAA 177



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AIA G  H    T +G +YT+G+ D G+LG GTT   + P  V AL    V  V+CG  H
Sbjct: 321 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 380

Query: 473 TV 474
           T+
Sbjct: 381 TL 382



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R I + + I +VD++ G  H   V+  G ++ WG     +LG  +  +  +P+LV AL  
Sbjct: 151 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 210

Query: 67  KNIRQVSAG 75
             +  ++ G
Sbjct: 211 HRVVDIACG 219



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 19/75 (25%), Positives = 37/75 (49%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   + +V +  G++  +A++ +G V+ WG     +LG G+  + R P+ V  L  K 
Sbjct: 259 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 318

Query: 69  IRQVSAGRSHSAAWT 83
           +  ++ G  H    T
Sbjct: 319 VIAIATGSLHCVCCT 333


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG +   +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIECQKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.1 bits (105), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S  G+ F WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
            H++ ++ +G+  + +G  +YG+LGLG +   + +PQ
Sbjct: 147 YHSLALSKEGE-FFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++  G  + +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
            H++ ++ K   V+ +G  +YG+LGLG +   + +PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + + DKG+ VYA+G    G+LGL  T
Sbjct: 97  LALNDKGQ-VYAWGLDTDGQLGLPGT 121



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALS 65
           R+I +  +I IV I+ G  H LA+S   +VF+WG N   QLGLG ++  +  PQL+ +L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  GT    KVP  + +L  + +  ++CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H++ ++ KG  V+++G  ++G+LGLG
Sbjct: 147 YHSLALS-KGSEVFSWGQNKHGQLGLG 172



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
           QS P    + L      +A G  HS V+T +G ++ +G   +G+LG     +  VP  + 
Sbjct: 178 QSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK 237

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +L    +  + CG +HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG ++D QLGL G +   + P+ + +L+
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLT 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I Q++ G  HS A
Sbjct: 136 DIQIVQIACGYYHSLA 151



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 43/82 (52%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           S ++ + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+
Sbjct: 177 SQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLL 236

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
            +L ++ I  +  G  H+AA T
Sbjct: 237 KSLRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
           IACG+ HS  ++    ++++G   +G+LG G  +  +  P+ + +L  +    V+ G  H
Sbjct: 142 IACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRFVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + ++  IV I  G +H  A++  G VF +G     QLG  +  +   P+ V  L    
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295

Query: 69  IRQVSAGRSHSAAWT 83
           + Q++ GR H++A+ 
Sbjct: 296 VTQIACGRQHTSAFV 310



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V+ V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  I D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + +++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAFV 310


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 386 TGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           +G++    T  Q +P      LQ      IACG   S  V + G +Y +G    G+LG G
Sbjct: 181 SGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLG 240

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           ++ N   P R+ AL  + ++ V+CG  HT+ + D+G+ VYA+G   YG+LG GN   +  
Sbjct: 241 SSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKSNQSY 299

Query: 505 P 505
           P
Sbjct: 300 P 300



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ VY +G    G+LGLG++G +PTP
Sbjct: 216 CSMAVVNTGE-VYVWGYNGNGQLGLGSSGNQPTP 248



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV NTG+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 197 RVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 256

Query: 67  KNIRQVSAGRSHS 79
             I++V+ G +H+
Sbjct: 257 IRIQRVACGYAHT 269



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPA 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            VV      VE  +C   HT     +G  VY +G
Sbjct: 302 PVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A + I I  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V+   ++ 
Sbjct: 251 IAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRI 310

Query: 69  IRQVSAGRSHSAA 81
           +   +   +H++A
Sbjct: 311 VEIAACHSAHTSA 323



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQPIPR 196



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  + +++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK + 
Sbjct: 149 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVV 208

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 209 NIACGQMCSMA 219



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + A     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVTEVACGSYHSLVLTS 169


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V+ V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  I D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 42.0 bits (97), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + +++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAFV 310


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS   T
Sbjct: 189 GIPFMQIAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
            H++ ++ K   V+ +G  +YG+LGLG +   + +PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + I+ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    ++ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 59/90 (65%), Gaps = 3/90 (3%)

Query: 410  YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVS 467
            +  +++CG++H+AV+T +G L+T+GN   G+LGHG     +   P RV +L +  +  +S
Sbjct: 1195 HAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMS 1254

Query: 468  CGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
             G  HTV I D+   +Y++G+G+YG+LG G
Sbjct: 1255 LGGEHTVVI-DRSFHIYSWGNGKYGQLGHG 1283



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 1/95 (1%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
              I CG  HS + TS+G +Y+FG    G+LGHG+T + + P+ +  L   +++ ++CG  
Sbjct: 1362 TGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPY 1421

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HTV   D   +VY +G GE+  LG G+   +  P+
Sbjct: 1422 HTVVTTDL-DSVYCWGQGEHMCLGTGSNKNELVPK 1455



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 1/102 (0%)

Query: 397  QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
            QS P+   +  Q     ++ G +H+ V+  + ++Y++GNG YG+LGHG +    +P+R+ 
Sbjct: 1236 QSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIE 1295

Query: 457  ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
                  + S++ G  HT+ +   G  ++AFG  E+G+LGL +
Sbjct: 1296 EFAGQKISSIATGYWHTLVLRSGGD-LFAFGSNEHGQLGLND 1336



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG  H+ V T    +Y +G G++  LG G+  N  VP+ V       VE V CGL HT
Sbjct: 1416 ITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHT 1475

Query: 474  VCI------ADKGKAVYAFGDGEYGKLGLG 497
              +      ++ G  VY  G  E+GKLG+G
Sbjct: 1476 ATLTQPMGDSNTGGNVYICGSSEHGKLGIG 1505



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 39/86 (45%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            I   K  +I  I+ G  H +  ++   V+ WG      LG G+  N   P+LV    NK 
Sbjct: 1405 IQGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKR 1464

Query: 69   IRQVSAGRSHSAAWTAPPLPPHTPGH 94
            + +V  G  H+A  T P    +T G+
Sbjct: 1465 VERVVCGLYHTATLTQPMGDSNTGGN 1490



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 38/67 (56%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            +  I  G  H +  ++ G V+++G N+  QLG G+  + R P+L+  L  KNI++++ G 
Sbjct: 1361 VTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGP 1420

Query: 77   SHSAAWT 83
             H+   T
Sbjct: 1421 YHTVVTT 1427



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%)

Query: 9    IPA--FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE--PQLVLAL 64
            +PA  F   H   +S G EH   ++  G++F WGNN+  QLG G      +  P  V +L
Sbjct: 1186 MPALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESL 1245

Query: 65   SNKNIRQVSAGRSHS 79
                I  +S G  H+
Sbjct: 1246 KQTPIMMMSLGGEHT 1260



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 29/42 (69%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
            +A G + +A++TSNG LY +G G +G++G+G   +  +P RV
Sbjct: 1532 LASGAEFNALITSNGALYMWGAGTHGQIGNGKNQDTWIPTRV 1573



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 5    SGRH------IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
            +G+H      + + K   I+ +S+G EH + +  +  +++WGN    QLG G    +  P
Sbjct: 1232 AGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLP 1291

Query: 59   QLVLALSNKNIRQVSAGRSHS 79
            + +   + + I  ++ G  H+
Sbjct: 1292 KRIEEFAGQKISSIATGYWHT 1312


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIIQVACGYYHSLA 151



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I I+ ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIIQVACGYYHSLA 151



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I I+ ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
            H++ ++ K   V+ +G  +YG+LGLG +   + +PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
            H++ ++ K   V+ +G  +YG+LGLG +   + +PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLV 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYCHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 CHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
            H++ ++ K   V+ +G  +YG+LGLG +   + +PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G ++TFG G  G+LGH +  +   P RV+ L    V  ++CG  HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           +        +YAFG G  G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  +  +G +YT G    G+LGH    N   PE++ AL   H+  V+CG +H+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + ++D+G+ ++++G G  G+LGL  T
Sbjct: 97  LALSDRGQ-LFSWGAGSDGQLGLMTT 121



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 5/123 (4%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             I A  + HI+ ++ G  H LA+S+ GQ+F+WG  SD QLGL   + +   P+L+  L+
Sbjct: 76  EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLN 135

Query: 66  NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLP---QDIPDHYGHLQNKPLPL 122
            + I QVS G  H  A  A      T G      L LG     Q  P     L+  PL  
Sbjct: 136 QQTILQVSCGNWHCLALAADG-QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ 194

Query: 123 IRA 125
           + A
Sbjct: 195 VAA 197



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
           R I       I+ +S G  H LA++  GQ F WG NS  QLGLG +  +   PQ V +L 
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188

Query: 66  NKNIRQVSAGRSHSAA 81
              + QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++  G L+++G G  G+LG  TT +   VP  +  LN+  +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
            + +A  G+  + +G   +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + + + I +  ++ G  H  A+S +G VF WG N+  QLGL ++ +   P  V  L  
Sbjct: 182 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRT 241

Query: 67  KNIRQVSAGRSHSAAWT 83
           + +  +S G  H+A  T
Sbjct: 242 QKVVYISCGEEHTAVLT 258



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+   +   +V IS G EH   ++ +G VF +G  S  QLG  +  +   P+ VL L   
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  HS  ++ +G ++ +G  + G+LG     + + P  V  L    V  +SCG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
           HT  +   G  V+ FG G  G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           IACG +H+ A V S+G +Y FG G  G+LG G T N K P  V      H   +S     
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARAGK 358

Query: 473 TVCI 476
             C+
Sbjct: 359 NDCL 362


>gi|432931000|ref|XP_004081565.1| PREDICTED: uncharacterized protein LOC101156289 [Oryzias latipes]
          Length = 1512

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 7/86 (8%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM---NWKVPERVVALNKVHVESVSCGL 470
           + CG +H+ V+T    ++TFG G YG+LGHGT +    W  P+ +   +K  V  ++CG 
Sbjct: 197 VCCGGQHTVVLTGED-VFTFGGGRYGQLGHGTFLFEAPW--PKPLQHFHKCSVRQIACGE 253

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGL 496
           NHT  I + G  +Y FGDG +GKLGL
Sbjct: 254 NHTAVITN-GGLLYTFGDGRHGKLGL 278



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           ++CG  HSA VT  G LYTFG    GRLG       N +VP+RV  +   HV  V CG  
Sbjct: 144 VSCGNSHSAFVTVAGDLYTFGESANGRLGLQVEQLDNHRVPQRVQGV-LGHVTQVCCGGQ 202

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV +   G+ V+ FG G YG+LG G
Sbjct: 203 HTVVLT--GEDVFTFGGGRYGQLGHG 226



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           IACG  H+AV+T+ G LYTFG+G +G+LG      +N   P       K HV+SVSCG +
Sbjct: 249 IACGENHTAVITNGGLLYTFGDGRHGKLGLTEENFVNQFSPTLCTQFLKFHVQSVSCGDH 308

Query: 472 HTVCIA 477
           H + +A
Sbjct: 309 HMLVLA 314



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 10  PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
           P  +   +  +S G     A+++ G++F WG+NS  Q+GLG+++   EP+ V     + +
Sbjct: 84  PFCQRARVTMLSAGCSTSAALTDDGRLFMWGDNSAGQIGLGDELFTAEPREVGV--GEAV 141

Query: 70  RQVSAGRSHSA 80
           + VS G SHSA
Sbjct: 142 KWVSCGNSHSA 152



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL------NKVHV 463
           Y A ++CG +HSAV+T+   +Y  G     +LG       + P+    L       +  V
Sbjct: 37  YPARVSCGREHSAVITAEDRVYYAGRNQKAQLGQ-----CRSPKTGSFLQLHPFCQRARV 91

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +S G + +  + D G+ ++ +GD   G++GLG+
Sbjct: 92  TMLSAGCSTSAALTDDGR-LFMWGDNSAGQIGLGD 125


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
           H++ ++ K   V+ +G  +YG+LGLG +   + +PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGIDCKKQASPQ 182



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAW 82
            P+ V  L    + Q++ GR H++A+
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIIQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I I+ ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIIQVACGYYHSLA 151



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I I+ ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLV 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGLDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLV 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Mus musculus]
 gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
 gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Mus musculus]
 gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
 gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
          Length = 551

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ +YA+G   YG+LG GN  
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-IYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 216 CSMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 248



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 47/106 (44%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G +  G++    +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+L
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL 289

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G G   N   P  VV      +E  +C   HT     +G  VY +G
Sbjct: 290 GTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQ++AWG NS  QLG GN+ N   
Sbjct: 240 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY 299

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 300 PTPVVVEKDRIIEIAACHSAHTSA 323



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T++G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQPIPR 196



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +++I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L 
Sbjct: 144 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQ 203

Query: 66  NKNIRQVSAGRSHSAA 81
           NK +  ++ G+  S A
Sbjct: 204 NKVVMNIACGQMCSMA 219



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.1 bits (87), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIIQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I I+ ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.1 bits (87), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 45.1 bits (105), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  I D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 41.6 bits (96), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + +++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAFV 310


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  +T++G LYT+G+G Y  G LGHG   +  +P+RV   L  V V SVSCG 
Sbjct: 300 VACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGS 359

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK V+ FGDG +G LG GN
Sbjct: 360 WHSALTTSSGK-VFTFGDGTFGALGHGN 386



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG++H A+ T  G ++ +G    GRLGHGT  +   P+ V AL   +VE V+CG  HT
Sbjct: 248 IACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFHT 307

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             I   G  +Y +GDG Y  G LG G
Sbjct: 308 CAITASGD-LYTWGDGYYNAGLLGHG 332



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 40/64 (62%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H AV+TS   +YT+G G  GRLGHG   + K P  V AL   HV+S++CG N T
Sbjct: 521 ISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFT 580

Query: 474 VCIA 477
            CI 
Sbjct: 581 TCIC 584



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +++CG  HSA+ TS+G ++TFG+G +G LGHG       P+ V  L+      V+CGL H
Sbjct: 354 SVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWH 413

Query: 473 TVCIADK---------GKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  I +           + ++ +G G+   LG G+   +  P
Sbjct: 414 SAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVP 455



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G  H+   +  G+VFAWG     +LG G   +   P+LV AL+  N+  V+ 
Sbjct: 243 LDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVAC 302

Query: 75  GRSHSAAWTA 84
           G  H+ A TA
Sbjct: 303 GEFHTCAITA 312



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-A 457
           VP    + + Y    +ACG   +  ++++G+++T G+   G+LG+  + + K P  V   
Sbjct: 454 VPTCVQSLIDYNFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKS-DGKHPTPVQDR 512

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L    VE +SCG  H   +  + + VY +G G  G+LG G    K  P
Sbjct: 513 LAGELVEEISCGSCHVAVLTSRSE-VYTWGMGANGRLGHGGVEDKKKP 559



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 12/103 (11%)

Query: 414 IACGFKHSAVV--TSNG--------YLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  HSA +  T+N          L+T+G GD   LGHG      VP  V +L   + 
Sbjct: 407 VACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNF 466

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL-GNTGLKPTP 505
             V+CG + T+ ++  G  V+  G    G+LG   + G  PTP
Sbjct: 467 HQVACGHSMTIALSTSGH-VFTMGSSSNGQLGNPKSDGKHPTP 508



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 38/59 (64%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           + +IS G+ HV  +++  +V+ WG  ++ +LG G   + ++P LV AL +++++ ++ G
Sbjct: 518 VEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACG 576



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 38/70 (54%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + + ++ +S G+ H    +++G+VF +G+ +   LG GN+     P+ V  LS     +
Sbjct: 347 LEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIK 406

Query: 72  VSAGRSHSAA 81
           V+ G  HSAA
Sbjct: 407 VACGLWHSAA 416


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKV-VVTIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 216 CCMAVVDSGE-VYVWGYNGNGQLGLGNSGNQPTP 248



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V  +G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV ++G+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 310

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 311 IEIAACHSTHTSA 323



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTINQPIPR 196



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ IN   P+ V   L 
Sbjct: 144 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQ 203

Query: 66  NKNIRQVSAGR 76
           NK +  ++ G+
Sbjct: 204 NKVVVTIACGQ 214



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG--LPQDIPDHY-GHLQNKPLP 121
           SNK + +V+ G  HS   T+        G+  S  +  G  + Q IP    G LQNK + 
Sbjct: 150 SNKQVIEVACGSYHSLVLTSDG-EVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVV 208

Query: 122 LI 123
            I
Sbjct: 209 TI 210


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYCHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 CHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++C    SA ++  GYLYT+G GD GRLGHG ++    P++V++L+   +  +S G  H+
Sbjct: 308 LSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGGGHS 367

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN-TGLKPTPQ 506
           + +  +G+ V+++G GE G+LG G  T  + TP+
Sbjct: 368 MALTKRGE-VFSWGRGENGQLGHGTFTSQQMTPK 400



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 6/98 (6%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN---KVHVESVSCGL 470
           I+ G  H++++T  G+LYT+G+G  G+LGHGT  ++  P  V        + V SV+ G 
Sbjct: 166 ISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGG 225

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKPTPQ 506
            HTV +   G  VY+FG  +  +LGLGN  +    TPQ
Sbjct: 226 KHTVALTVCGN-VYSFGGNDSCQLGLGNISSSYYSTPQ 262



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 2/104 (1%)

Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERV 455
           QS P    +   +    ++ G  HS  +T  G ++++G G+ G+LGHGT T     P+++
Sbjct: 343 QSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQI 402

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            A     ++ +S G  H++ I D   +++A+G G+YG LG+ ++
Sbjct: 403 QAFQNKTIKVISAGGYHSIAI-DTNGSMFAWGRGDYGVLGVSSS 445



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALSNKNIRQVSAG 75
           IVD+S+G  H +A++  G+VF+WG   + QLG G   + +  P+ + A  NK I+ +SAG
Sbjct: 357 IVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAG 416

Query: 76  RSHSAA 81
             HS A
Sbjct: 417 GYHSIA 422



 Score = 44.3 bits (103), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 34/67 (50%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I+ +S  T    A+S  G ++ WG   + +LG G+ +    P+ V++L    I  +S G 
Sbjct: 305 IIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGG 364

Query: 77  SHSAAWT 83
            HS A T
Sbjct: 365 GHSMALT 371



 Score = 40.8 bits (94), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN--YREPQLV 61
           ++ +V ++ G +H +A++  G V+++G N   QLGLGN  +  Y  PQLV
Sbjct: 215 SLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLV 264



 Score = 40.4 bits (93), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK---NIRQVS 73
           +V IS G  H   +++ G ++ WG+    +LG G   +Y EP+LV     K    +  V+
Sbjct: 163 VVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVA 222

Query: 74  AGRSHSAAWT 83
            G  H+ A T
Sbjct: 223 NGGKHTVALT 232



 Score = 38.9 bits (89), Expect = 6.6,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 17/101 (16%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE--------- 464
           I+ G  HS  + +NG ++ +G GDYG LG  ++++         L K             
Sbjct: 413 ISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNS 472

Query: 465 -------SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
                  +VS G  H V   + G  +Y++G G   +LGL N
Sbjct: 473 SAGERFINVSSGFQHNVAQTENGD-LYSWGCGSGNRLGLAN 512


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QVS G  HS A
Sbjct: 136 DIQIVQVSCGYYHSLA 151



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV +S G  H LA+S   +VF+WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  VSCG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+++G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFSWGQNKYGQLGLGIDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 6/159 (3%)

Query: 353 QSLRAIRDIHLSGVTEANFPEIIPLECFEGASW----TGRI-TPIVTGGQSVPLTFANRL 407
           ++++++ DI +  V+   +  +   +  E  SW     G++   I    Q+ P    + L
Sbjct: 129 RNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLL 188

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
                 +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + 
Sbjct: 189 GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYIC 248

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           CG +HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 249 CGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +L+
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLA 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 2/87 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L  + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H++ ++ K   V+ +G  +YG+LGLG
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLG 172



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  P+L+ +L 
Sbjct: 129 RNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L ++ I  +  
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICC 249

Query: 75  GRSHSAAWT 83
           G  H+AA T
Sbjct: 250 GEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 5/80 (6%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE---PQLVLA 63
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG  I+Y++   PQL+ +
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--IDYKKQASPQLIKS 186

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L      QV+AG +HS   T
Sbjct: 187 LLGIPFMQVAAGGAHSFVLT 206



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           H++ ++ K   V+ +G  +YG+LGLG
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLG 172



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +   P  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYFP 233



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R+ P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLV 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYCHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYC 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 5/80 (6%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE---PQLVLA 63
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG  I+Y++   PQL+ +
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--IDYKKQASPQLIKS 186

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L      QV+AG +HS   T
Sbjct: 187 LLGIPFMQVAAGGAHSFVLT 206



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLG LG++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           H++ ++ K   V+ +G  +YG+LGLG
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLG 172



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +   P  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +L  + 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQK 243

Query: 69  IRQVSAGRSHSAAWT 83
           I  +  G  H+AA T
Sbjct: 244 IVYICCGEDHTAALT 258



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYFP 233



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R+ P    + +   IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
 gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
          Length = 560

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V   G +Y +G    G+
Sbjct: 186 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQ 245

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ +YA+G   YG+LG GN  
Sbjct: 246 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-IYAWGANSYGQLGTGNKS 304

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 305 NQSYPTP 311



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 166 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQM 224

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 225 CSMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 257



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 47/106 (44%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G +  G++    +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+L
Sbjct: 239 GYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL 298

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G G   N   P  VV      +E  +C   HT     +G  VY +G
Sbjct: 299 GTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 344



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQ++AWG NS  QLG GN+ N   
Sbjct: 249 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY 308

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 309 PTPVVVEKDRIIEIAACHSAHTSA 332



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T++G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 119 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 178

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 179 DGE-VFAWGYNNSGQVGSGSTANQPIPR 205



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +++I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 206 RVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 265

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 266 IRVQRVACGYAHTLVLT 282



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK + 
Sbjct: 158 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVM 217

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 218 NIACGQMCSMA 228



 Score = 41.6 bits (96), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 99  RRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 158

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 159 SNKQVIEVACGSYHSLVLTS 178


>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
           garnettii]
          Length = 816

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            ++CG +HSA+VT N  LY FG+ ++G+LG G+      P  + AL    V+  +CG  H
Sbjct: 39  CLSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTH 98

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           T+ I+ +G  VYA G    G+LGLG+T  + T
Sbjct: 99  TI-ISTEGGNVYATGGNNEGQLGLGDTDERDT 129



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 59/86 (68%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT +G LYTFG  + G+LG  + +  N ++P+ V ++    ++ V+CG  
Sbjct: 195 ISCGYYHSAFVTIDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPDKVIQ-VACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HT+ + +  ++VYAFG G++G+LGLG
Sbjct: 254 HTLVLTE--ESVYAFGLGQFGQLGLG 277



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +Y FG G +G+LG GT       P+ +  +    + S+SCG NH
Sbjct: 248 VACGGGHTLVLTEES-VYAFGLGQFGQLGLGTFIFETSEPKVLEYVKGEKIISISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TAMITDTG-GIYTFGDGRHGKLGLG 330



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGL 470
           +I+CG  H+A++T  G +YTFG+G +G+LG G     N   P       K  V+ V+CG 
Sbjct: 299 SISCGENHTAMITDTGGIYTFGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGG 358

Query: 471 NHTVCIA 477
            H +  A
Sbjct: 359 CHMLVFA 365



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 3/76 (3%)

Query: 7  RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           +IP+   FK+   + +S G EH   V+   +++ +G+N+  QLGLG++    +P  + A
Sbjct: 24 ENIPSKFWFKSDTPICLSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKA 83

Query: 64 LSNKNIRQVSAGRSHS 79
          L  + ++  + GR+H+
Sbjct: 84 LKPEKVKFAACGRTHT 99



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 18/134 (13%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  GQ+F WG+NS+ Q+GL +  N   P  V     K
Sbjct: 133 ISFFTSQHKIKQLSAGSNTSAALTEDGQLFMWGDNSEGQIGLKDVTNVCVPHQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARL 127
            I  +S G  HSA  T      +T G   S S +LGLP  +      L N  +P      
Sbjct: 191 PISWISCGYYHSAFVTIDG-ELYTFGE--SESGKLGLPSQL------LTNHRIP------ 235

Query: 128 KLLNRFSDLIYQVV 141
           +L++   D + QV 
Sbjct: 236 QLVSSIPDKVIQVA 249



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           I A K   +   + G  H +  +  G V+A G N++ QLGLG+        L+    S  
Sbjct: 81  IKALKPEKVKFAACGRTHTIISTEGGNVYATGGNNEGQLGLGDTDERDTFHLISFFTSQH 140

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156



 Score = 38.9 bits (89), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G +   +LGL +Q+  N+R PQLV ++ +K I QV+ G  
Sbjct: 195 ISCGYYHSAFVTIDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPDKVI-QVACGGG 253

Query: 78  HSAAWT 83
           H+   T
Sbjct: 254 HTLVLT 259


>gi|395834109|ref|XP_003790056.1| PREDICTED: probable E3 ubiquitin-protein ligase C12orf51 homolog
            [Otolemur garnettii]
          Length = 4349

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 146/338 (43%), Gaps = 36/338 (10%)

Query: 105  PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
            P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 3847 PADAADPRVACLLNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTTMYTHSIAALL 3904

Query: 164  HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
              +   +F     T+ + R +  T+     +  P +T+  L     + + +    F Q +
Sbjct: 3905 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLEIVGGELRASENSYFCQAA 3963

Query: 220  RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
            RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 3964 RQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 4023

Query: 273  VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L P  W
Sbjct: 4024 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDLLPSFW 4079

Query: 332  KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII--------------P 376
            K++V EP+    DL++ D L    ++    I+     EA   EI               P
Sbjct: 4080 KMLVGEPLDPDQDLQEADILTYNYVKKFESINDETELEALCAEIASQHLATESPDSPNKP 4139

Query: 377  LECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
               F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 4140 CCRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 4176


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + +++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
           paniscus]
 gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
           [Gorilla gorilla gorilla]
 gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
          Length = 556

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 162 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 220

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 221 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 253



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 182 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 241

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 242 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 300

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 301 NQSYPTP 307



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 202 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 262 IRVQRVACGYAHTLVLT 278



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 256 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 315

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 316 IEIAACHSTHTSA 328



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 247 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 306

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 174

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 175 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 201



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L NK + 
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 213

Query: 71  QVSAGR 76
            ++ G+
Sbjct: 214 TIACGQ 219



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 95  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 154

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 155 SNKQVIEVACGSYHSLVLTS 174


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.5 bits (88), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
          Length = 527

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V   G +Y +G    G+
Sbjct: 153 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ +YA+G   YG+LG GN  
Sbjct: 213 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-IYAWGANSYGQLGTGNKS 271

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 272 NQSYPTP 278



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 133 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQM 191

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 192 CSMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 224



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 218 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT 277

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            VV      +E  +C   HT     +G  VY +G
Sbjct: 278 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQ++AWG NS  QLG GN+ N   
Sbjct: 216 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY 275

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 276 PTPVVVEKDRIIEIAACHSAHTSA 299



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T++G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 86  HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 145

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 146 DGE-VFAWGYNNSGQVGSGSTANQPIPR 172



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +++I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 173 RVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 232

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 233 IRVQRVACGYAHTLVLT 249



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK + 
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVM 184

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 185 NIACGQMCSMA 195



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 66  RRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 126 SNKQVIEVACGSYHSLVLTS 145


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V   G +Y +G    G+
Sbjct: 153 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 213 LGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 271

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 272 NQSYPTP 278



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 133 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQM 191

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 192 CSMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 224



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 216 GSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 275

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 276 PTPVVVEKDRIIEIAACHSAHTSA 299



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 173 RVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQG 232

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 233 IRVQRVACGYAHTLVLT 249



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 86  HVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 145

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 146 DGE-VFAWGYNNSGQVGSGSTANQPIPR 172



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 37/74 (50%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P  VV      +E  +C   HT
Sbjct: 238 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHT 297

Query: 474 VCIADKGKAVYAFG 487
                +G  VY +G
Sbjct: 298 SAAKTQGGHVYMWG 311



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L 
Sbjct: 120 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQ 179

Query: 66  NKNIRQVSAGRSHSAA 81
           NK +  ++ G+  S A
Sbjct: 180 NKVVVNIACGQMCSMA 195



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R +       I  +S G+  HV+  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 66  RRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 126 SNKQVIEVACGSYHSLVLTS 145


>gi|428185814|gb|EKX54666.1| hypothetical protein GUITHDRAFT_40316, partial [Guillardia theta
           CCMP2712]
          Length = 272

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 3/82 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG KH+  +TS+  LYT GNG  G+LGHG   ++  P++V  L    V+ VSCG  HT
Sbjct: 194 ISCGSKHTCFLTSDNSLYTCGNGKDGKLGHGDERSYLYPKKVETLQA--VKEVSCGDYHT 251

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
            CI D    +Y FG G  G+LG
Sbjct: 252 ACI-DGKSIIYTFGSGTRGQLG 272



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           Y    I CG +H A +   G   T+G G  G+LGH +  +   P +V  L  V V ++SC
Sbjct: 137 YVVDKIFCGERHCACIVRYGQALTWGCGSDGQLGHSSRDDEHFPRKVEHLANVSVRTISC 196

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           G  HT C      ++Y  G+G+ GKLG G+
Sbjct: 197 GSKHT-CFLTSDNSLYTCGNGKDGKLGHGD 225



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 7/108 (6%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           V  TF  R++     +ACG  HS V+ S+G ++T+G   +G+LGHG + ++       A 
Sbjct: 27  VQQTFDLRVE----DMACGSAHS-VILSDGKVFTWGQNKHGQLGHGPS-DYLGSLGPTAK 80

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
                  V+ G N ++ + D+G+ ++ FG+G +G L  G+   K +PQ
Sbjct: 81  TDGKCVQVAAGYNFSMALTDRGE-IFVFGEGRHGVLAQGDELSKSSPQ 127



 Score = 45.1 bits (105), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 16  HIVD-ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           ++VD I  G  H   +   GQ   WG  SD QLG  ++ +   P+ V  L+N ++R +S 
Sbjct: 137 YVVDKIFCGERHCACIVRYGQALTWGCGSDGQLGHSSRDDEHFPRKVEHLANVSVRTISC 196

Query: 75  GRSHSAAWTA 84
           G  H+   T+
Sbjct: 197 GSKHTCFLTS 206



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +    N+ +  IS G++H   +++   ++  GN  D +LG G++ +Y  P+ V  L  
Sbjct: 181 RKVEHLANVSVRTISCGSKHTCFLTSDNSLYTCGNGKDGKLGHGDERSYLYPKKVETL-- 238

Query: 67  KNIRQVSAGRSHSAA 81
           + +++VS G  H+A 
Sbjct: 239 QAVKEVSCGDYHTAC 253


>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Nomascus leucogenys]
          Length = 556

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 162 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 220

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 221 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 253



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 182 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 241

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 242 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 300

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 301 NQSYPTP 307



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 202 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 262 IRVQRVACGYAHTLVLT 278



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 256 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 315

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 316 IEIAACHSTHTSA 328



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 247 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 306

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 174

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 175 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 201



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L NK + 
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 213

Query: 71  QVSAGR 76
            ++ G+
Sbjct: 214 TIACGQ 219



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 95  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 154

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 155 SNKQVIEVACGSYHSLVLTS 174


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 STFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
            A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG 
Sbjct: 87  VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
            H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + + +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG GT    +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 45.1 bits (105), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + +++ GR H++ + 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSTFV 310



 Score = 38.5 bits (88), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  +G+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|297665114|ref|XP_002810963.1| PREDICTED: E3 ubiquitin-protein ligase HECTD3 [Pongo abelii]
          Length = 761

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 13/123 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 516 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 575

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S Q    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 576 NGTGEARDMYVPNP----SCQDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 631

Query: 340 TFT 342
           +++
Sbjct: 632 SWS 634


>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
           mutus]
          Length = 544

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V + G ++ +G    G+
Sbjct: 170 GYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQ 229

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 230 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 288

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 289 NQSYPTP 295



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV   L    V +++CG   
Sbjct: 150 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMC 209

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ + + G+ V+ +G    G+LGLG++G +PTP
Sbjct: 210 SMAVVNTGE-VFVWGYNGNGQLGLGSSGNQPTP 241



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 40/67 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V+I+ G    +AV NTG+VF WG N + QLGLG+  N   P  V AL    +++V+ G 
Sbjct: 200 VVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGY 259

Query: 77  SHSAAWT 83
           +H+   T
Sbjct: 260 AHTLVLT 266



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 233 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 292

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 293 PTPVVVEKDRIIEIAACHSAHTSA 316



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 235 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 294

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            VV      +E  +C   HT     +G  VY +G
Sbjct: 295 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 328



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT    VP  +   L+   V  V+CG  H++ +  
Sbjct: 103 HIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTS 162

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 163 DGE-VFAWGYNNSGQVGSGSTANQPIPR 189



 Score = 45.1 bits (105), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L 
Sbjct: 137 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQ 196

Query: 66  NKNIRQVSAGRSHSAA 81
           +K +  ++ G+  S A
Sbjct: 197 SKVVVNIACGQMCSMA 212



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G       P  +   L
Sbjct: 83  RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNL 142

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 143 SNKQVIEVACGSYHSLVLTS 162


>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
          Length = 526

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 5/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P    + LQ      IACG   S  V  NG +Y +G    G+
Sbjct: 153 GYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R +AL  V V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 213 LGLGSSGNQSTPCR-LALQGVRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 270

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 271 NQSYPTP 277



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV +   NKV V +++CG  
Sbjct: 133 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKV-VVNIACGQM 191

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VY +G    G+LGLG++G + TP
Sbjct: 192 CSMAVVDNGE-VYVWGYNGNGQLGLGSSGNQSTP 224



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+  HV  V+CG  H++ +  
Sbjct: 86  HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKHVIEVACGSYHSLVLTS 145

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 146 DGE-VFAWGYNNSGQVGSGSTANQPIPR 172



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 382 GASWTGRITPIVTGGQSVPLTFA---NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDY 438
           G +  G++    +G QS P   A    R+Q     +ACG+ H+ V+T  G +Y +G   Y
Sbjct: 206 GYNGNGQLGLGSSGNQSTPCRLALQGVRVQ----RVACGYAHTLVLTDEGQVYAWGANSY 261

Query: 439 GRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G+LG G   N   P  VV      +E  +C   HT     +G  VY +G
Sbjct: 262 GQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 310



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 40/71 (56%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
           A + + +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V+   ++ I 
Sbjct: 228 ALQGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIE 287

Query: 71  QVSAGRSHSAA 81
             +   +H++A
Sbjct: 288 IAACHSAHTSA 298



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 2/76 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N H+++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V  +L 
Sbjct: 120 HISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTSSLQ 179

Query: 66  NKNIRQVSAGRSHSAA 81
           NK +  ++ G+  S A
Sbjct: 180 NKVVVNIACGQMCSMA 195



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R   + +N  +V+I+ G    +AV + G+V+ WG N + QLGLG+  N   P   LAL  
Sbjct: 173 RVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTP-CRLALQG 231

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 232 VRVQRVACGYAHTLVLT 248



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 66  RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK++ +V+ G  HS   T+
Sbjct: 126 SNKHVIEVACGSYHSLVLTS 145


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  V+CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +V+CG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV ++ G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A+ACG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGIDCQKQTSPQ 182



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  V+ G +H+ A
Sbjct: 84 QNIVAVACGEAHTLA 98



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 7   RHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +   P+ V 
Sbjct: 230 RYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289

Query: 63  ALSNKNIRQVSAGRSHSAAW 82
            L    + QV+ GR H++A+
Sbjct: 290 ELMGSIVTQVACGRQHTSAF 309



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P R        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 5/111 (4%)

Query: 396 GQSVPLTFANRLQYYEAAI----ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV 451
           G  + +T    + +++ ++    A G+ HS  V+ +G ++T GNG +G+LGHG T++   
Sbjct: 83  GDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLST 142

Query: 452 PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           P +V   N   V+ V+CG+ H++ +   G  V  FG G+ G+LG  +  +K
Sbjct: 143 PAKVSHFNNDSVKMVACGMRHSLVLF-AGNQVCGFGSGKRGQLGFSSDRIK 192



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H   +TS G ++T+G G  G+LGHG  +N  +P+ V   +   +   + G +H+
Sbjct: 53  LACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHS 112

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             ++D G  ++  G+G +G+LG G+T    TP
Sbjct: 113 GFVSDSG-CIFTCGNGSFGQLGHGDTLSLSTP 143



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G  HV+A+++ G+VF WG  S  QLG G+ +N   P+LV    +  I Q +AG SHS
Sbjct: 53  LACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHS 112

Query: 80  AAWTAPPLPPHTPGHTPSSSLRLG--LPQDIPDHYGHLQNKPLPLIRARLK 128
             + +      T G+     L  G  L    P    H  N  + ++   ++
Sbjct: 113 -GFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMR 162



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
             +P F  + ++ I+ G EH  AV+  G+V  WG     QLGLGN  +   P+LV +L +
Sbjct: 297 EKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELV-SLGS 355

Query: 67  KNIR 70
            ++R
Sbjct: 356 IDLR 359



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 5/70 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES----VSCG 469
           IA G +HSA VT NG + T+G G++G+LG G T +   PE +V+L  + + +    V CG
Sbjct: 310 IAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPE-LVSLGSIDLRTKEIKVYCG 368

Query: 470 LNHTVCIADK 479
              T  +  K
Sbjct: 369 SGFTYAVKRK 378



 Score = 42.4 bits (98), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 36/71 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +  F +  I   + G  H   VS++G +F  GN S  QLG G+ ++   P  V   +N +
Sbjct: 94  VSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDS 153

Query: 69  IRQVSAGRSHS 79
           ++ V+ G  HS
Sbjct: 154 VKMVACGMRHS 164



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 28/122 (22%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER---- 454
            P +  + L + E A+  G+ H+ ++T +G ++  G          +T+N K PE+    
Sbjct: 242 APQSLPSPLSFREVAV--GWNHALLLTVDGEVFKLG----------STLN-KQPEKQQLQ 288

Query: 455 ----------VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
                     V   + V V  ++ G  H+  + + G+ V  +G GE+G+LGLGNT  + +
Sbjct: 289 IDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGE-VKTWGWGEHGQLGLGNTNDQTS 347

Query: 505 PQ 506
           P+
Sbjct: 348 PE 349


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V + G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LKPTP 505
            +  P
Sbjct: 296 NQSYP 300



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ VY +G    G+LGLG++G +PTP
Sbjct: 216 CSMAVVNTGE-VYVWGYNGNGQLGLGSSGNQPTP 248



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P  VV      +E  +C L HT
Sbjct: 262 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHT 321

Query: 474 VCIADKGKAVYAFG 487
                +G  VY +G
Sbjct: 322 SAAKTQGGHVYMWG 335



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV NTG+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 197 RVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 240 GSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 299

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 300 PAPVVVEKDRIIEIAACHLAHTSA 323



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  +P  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQPIPR 196



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  + +++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L 
Sbjct: 144 HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQ 203

Query: 66  NKNIRQVSAGRSHSAA 81
           NK +  ++ G+  S A
Sbjct: 204 NKVVVNIACGQMCSMA 219



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVTEVACGSYHSLVLTS 169


>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
          Length = 1152

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRHGKLGLG 330



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG    +  N + P+ V  + +  ++ V+CG  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     V    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
             +   G+ +Y FG+ E GKLGL N   G   TPQ
Sbjct: 203 AFVTTDGE-LYVFGEPENGKLGLPNQLLGNHRTPQ 236



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVVFA 365



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSA 80
            +  +S G  HSA
Sbjct: 191 PVSWISCGYYHSA 203



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL--SN 66
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+    R    V++   S 
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGD-TEERNTFHVISFFTSE 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAALT 156



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ+  N+R PQLV  +  K I QV+ G  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGE 253

Query: 78  HSAAWT 83
           H+   T
Sbjct: 254 HTVVLT 259


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +        +Y+FG G  G+LG G+T  + +P
Sbjct: 307 LAFVPSSGRIYSFGLGGNGQLGTGSTINRKSP 338



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   + PE+V AL+   + +VSCG  HT
Sbjct: 39  VGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSR--RKPEQVGALDAQIIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ V+++G   YG++GL
Sbjct: 97  LALNDKGQ-VFSWGHAVYGQIGL 118



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G ++++G+  YG++G  T   + +VP  + +L+ V +  V+CG +
Sbjct: 88  AVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHH 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           H++ ++ K   ++++G  +YG+LGLG
Sbjct: 148 HSLALS-KDSDIFSWGQNQYGQLGLG 172



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           RHI +   I    I+ G  H  A++ +G +F WG N   QLGL ++ +   P L+ +L +
Sbjct: 182 RHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS 241

Query: 67  KNIRQVSAGRSHSAAWT 83
           + I  +  G  H+AA T
Sbjct: 242 QKIIHICCGEDHTAALT 258



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IA G  HS  +T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +
Sbjct: 193 AHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGED 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 253 HTAALTKEG-GVFTFGAGGYGQLGHNSTNHEVNPR 286



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSNKNIRQVSAG 75
           IV +S G  H LA+++ GQVF+WG+    Q+GL     Y R P+ + +LS+  I QV+ G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACG 145

Query: 76  RSHSAAWTAPPLPPHTPGHTPSSSLRLGLP---QDIPDHYGHLQNKPLPLIRA 125
             HS A +       + G      L LGL    +  P H   L   P   I A
Sbjct: 146 HHHSLALSKDS-DIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAA 197



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  ++ IV ++ G  H LA+S    +F+WG N   QLGLG +I     P+ + +LS
Sbjct: 129 RNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLS 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                 ++AG  HS A T
Sbjct: 189 GIPFAHIAAGGGHSFALT 206



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++ +  ++++G   YG+LG G  +  +  P  + +L+ +    ++ G  H
Sbjct: 142 VACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFALTISG-AIFGWGRNKFGQLGLTDETDRNVP 233



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIPAF----KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++PA     ++  I+ I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H+ A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTLAFV 310



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N ++ D+  G+ H + V + G V+  G N   QLG  +  + R+P+ V AL  
Sbjct: 26 RRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLG--HDKSRRKPEQVGALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          + I  VS G +H+ A
Sbjct: 84 QIIVAVSCGEAHTLA 98


>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRHGKLGLG 330



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG    +  N + P+ V  + +  ++ V+CG  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     V    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
             +   G+ +Y FG+ E GKLGL N   G   TPQ
Sbjct: 203 AFVTTDGE-LYVFGEPENGKLGLPNQLLGNHRTPQ 236



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVVFA 365



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 42.4 bits (98), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSA 80
            +  +S G  HSA
Sbjct: 191 PVSWISCGYYHSA 203



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL--SN 66
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+    R    V++   S 
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGD-TEERNTFHVISFFTSE 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAALT 156



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ+  N+R PQLV  +  K I QV+ G  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGE 253

Query: 78  HSAAWT 83
           H+   T
Sbjct: 254 HTVVLT 259


>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
 gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
          Length = 646

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRHGKLGLG 330



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG    +  N + P+ V  + +  V  V+CG  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     V    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW--ISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
             +   G+ +Y FG+ E GKLGL N   G   TPQ
Sbjct: 203 AFVTTDGE-LYVFGEPENGKLGLPNQLLGNHRTPQ 236



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVVFA 365



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWT 83
            +  +S G  HSA  T
Sbjct: 191 PVSWISCGYYHSAFVT 206



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ+  N+R PQLV  +  K I QV+ G  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGE 253

Query: 78  HSAAWT 83
           H+   T
Sbjct: 254 HTVVLT 259



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL--SN 66
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+    R    V++   S 
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGD-TEERNTFHVISFFTSE 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAALT 156


>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
            KIAA1239-like [Oreochromis niloticus]
          Length = 2697

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 2/92 (2%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I+CG  HSAV+T +G +YTFG+G  G+LGH T+ N   P+ V  L+      ++CG +HT
Sbjct: 1926 ISCGESHSAVLTKDGKVYTFGDGSQGQLGHSTSANEVKPKLVAGLDGP-ASQIACGRHHT 1984

Query: 474  VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            + +   G+ ++AFG G  G+ G G+     TP
Sbjct: 1985 LVLGSSGQ-LWAFGSGAKGQTGNGHNDSCLTP 2015



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 20   ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNKNIRQVSAGRSH 78
            ++ G  H LA++  G VF+WG NS  QLGLG ++  +  P ++ AL+   + Q++AG +H
Sbjct: 1819 VACGNSHSLALTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTH 1878

Query: 79   S 79
            S
Sbjct: 1879 S 1879



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
            A+ACG  H   V+++G+++++G G+ G+LG   T  +   P +V     + +  V+CG +
Sbjct: 1765 AMACGQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNS 1824

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H++ +  KG  V+++G   +G+LGLG 
Sbjct: 1825 HSLALT-KGGDVFSWGLNSHGQLGLGK 1850



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 20/143 (13%)

Query: 366  VTEANFPEIIPLECFE------------GASWTGRITPIVTGGQSVPLTFANRLQYYEAA 413
            +++    E  P+ C+E            G S +G+  P     Q+ P   +  +      
Sbjct: 1661 ISDVTVDEDEPIRCWEDPSGGDMQLFCWGDSSSGQFGP-----QAAPSPVSWTVPGVITK 1715

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I CG +H+  + ++G + + G+   G+LG     N K+  +V AL    V +++CG +H 
Sbjct: 1716 ICCGDRHTLFLNADGNVLSCGHNSQGQLGRQKKKNGKIIAQVEALGS--VVAMACGQDHC 1773

Query: 474  VCIADKGKAVYAFGDGEYGKLGL 496
            + ++  G  V+++G GE G+LGL
Sbjct: 1774 LAVSASGH-VFSWGAGEDGQLGL 1795



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG-LGNQINYREPQLVLALSNKNIRQVSAG 75
            +V ++ G +H LAVS +G VF+WG   D QLG L    +   P  V       I QV+ G
Sbjct: 1763 VVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVACG 1822

Query: 76   RSHSAAWT 83
             SHS A T
Sbjct: 1823 NSHSLALT 1830



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 13/100 (13%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER-------VVALNKVHVESV 466
            IA G  HS  +T    +Y  G    G+LG       +V E+       V AL  + V  +
Sbjct: 1872 IAAGGTHSLFLTLADLVYCCGANKCGQLGVN-----RVDEKGRFNICMVPALRPLSVSFI 1926

Query: 467  SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            SCG +H+  +   GK VY FGDG  G+LG   +  +  P+
Sbjct: 1927 SCGESHSAVLTKDGK-VYTFGDGSQGQLGHSTSANEVKPK 1965



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +PA + + +  IS G  H   ++  G+V+ +G+ S  QLG     N  +P+LV  L    
Sbjct: 1915 VPALRPLSVSFISCGESHSAVLTKDGKVYTFGDGSQGQLGHSTSANEVKPKLVAGLDGP- 1973

Query: 69   IRQVSAGRSHS 79
              Q++ GR H+
Sbjct: 1974 ASQIACGRHHT 1984


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V   G +Y +G    G+
Sbjct: 194 GYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQ 253

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G+  N   P R+ AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 254 LGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 312

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 313 NQSYPTP 319



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV   L    V +++CG   
Sbjct: 174 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMC 233

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ + D G+ VY +G    G+LGLG+ G +PTP
Sbjct: 234 SMAVVDTGE-VYVWGYNGNGQLGLGSGGNQPTP 265



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V+   ++ 
Sbjct: 268 IAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVIVEKDRI 327

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 328 IEIAACHSAHTSA 340



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 214 RVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQG 273

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 274 IRVQRVACGYAHTLVLT 290



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 41/93 (44%)

Query: 395 GGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P  
Sbjct: 260 GNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 319

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           V+      +E  +C   HT     +G  VY +G
Sbjct: 320 VIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 352



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 127 HVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 186

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 187 DGE-VFAWGYNNSGQVGSGSTANQPIPR 213



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK + 
Sbjct: 166 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVV 225

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 226 NIACGQMCSMA 236



 Score = 41.6 bits (96), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  HV+  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 107 RRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 166

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 167 SNKQVIEVACGSYHSLVLTS 186


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +        +Y+FG G  G+LG G+T  + +P
Sbjct: 307 LAFVPSSGRIYSFGLGGNGQLGTGSTINRKSP 338



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   + PE+V AL+   + +VSCG  HT
Sbjct: 39  VGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSR--RKPEQVGALDAQIIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ V+++G   YG++GL
Sbjct: 97  LALNDKGQ-VFSWGHAVYGQIGL 118



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G ++++G+  YG++G  T   + +VP  + +L+ V +  V+CG +
Sbjct: 88  AVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHH 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           H++ ++ K   ++++G  +YG+LGLG
Sbjct: 148 HSLALS-KDSDIFSWGQNQYGQLGLG 172



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           RHI +   I    I+ G  H  A++ +G +F WG N   QLGL ++ +   P L+ +L +
Sbjct: 182 RHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS 241

Query: 67  KNIRQVSAGRSHSAAWT 83
           + I  +  G  H+AA T
Sbjct: 242 QKIIHICCGEDHTAALT 258



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IA G  HS  +T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +
Sbjct: 193 AHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGED 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 253 HTAALTKEG-GVFTFGAGGYGQLGHNSTNHEVNPR 286



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINY-REPQLVLALSNKNIRQVSAG 75
           IV +S G  H LA+++ GQVF+WG+    Q+GL     Y R P+ + +LS+  I QV+ G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACG 145

Query: 76  RSHSAAWTAPPLPPHTPGHTPSSSLRLGLP---QDIPDHYGHLQNKPLPLIRA 125
             HS A +       + G      L LGL    +  P H   L   P   I A
Sbjct: 146 HHHSLALSKDS-DIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAA 197



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  ++ IV ++ G  H LA+S    +F+WG N   QLGLG +I     P+ + +LS
Sbjct: 129 RNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLS 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                 ++AG  HS A T
Sbjct: 189 GIPFAHIAAGGGHSFALT 206



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG  HS  ++ +  ++++G   YG+LG G  +  +  P  + +L+ +    ++ G  H
Sbjct: 142 VACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFALTISG-AIFGWGRNKFGQLGLTDETDRNVP 233



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIPAF----KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++PA     ++  I+ I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H+ A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTLAFV 310



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N ++ D+  G+ H + V + G V+  G N   QLG  +  + R+P+ V AL  
Sbjct: 26 RRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLG--HDKSRRKPEQVGALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          + I  VS G +H+ A
Sbjct: 84 QIIVAVSCGEAHTLA 98


>gi|355694498|gb|AER99689.1| hect domain and RLD 4 [Mustela putorius furo]
          Length = 812

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 11  VCCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 70

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 71  SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 102



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 34/66 (51%)

Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
          IV +  G +H  A++  G VF +G     QLG  +  +   P+ V  L    + Q++ GR
Sbjct: 8  IVYVCCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGR 67

Query: 77 SHSAAW 82
           H++A+
Sbjct: 68 QHTSAF 73


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 11/123 (8%)

Query: 394 TGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP 452
           TG Q +P   +  L     + +ACG  H+A V+S+G L+T+G+G +G LGHG   +   P
Sbjct: 396 TGSQWLPRQISGPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHP 455

Query: 453 ERVVALNKVHVESVSCGLNHTVCIAD----------KGKAVYAFGDGEYGKLGLGNTGLK 502
           + V +L  + V+SV+CG  HT  I D           G  ++ +GDG+ G+LG  +   K
Sbjct: 456 KEVESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKK 515

Query: 503 PTP 505
             P
Sbjct: 516 LQP 518



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  H+A++T  G ++ +G G  G+LGH   M+   P  V +L+   V+ V+CG   T
Sbjct: 310 ISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLDGFLVKFVACGEYQT 369

Query: 474 VCIADKGKAVYAFGDGEYG 492
             + D G+ ++ +G+ +YG
Sbjct: 370 CALTDSGE-LFVWGENKYG 387



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            K   + +IS G+ HV A+++ G V+ WG  ++ QLGLGN  +   P LV AL ++ ++ 
Sbjct: 576 LKEEFVKEISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQS 635

Query: 72  VSAGRSHSAA 81
           ++ G + +AA
Sbjct: 636 IACGSNLTAA 645



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+S  G++       +S+ +      + +   I+ G  H A +TS G +YT+G G  G+L
Sbjct: 552 GSSVHGQLGNPQAKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGSVYTWGKGTNGQL 611

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           G G   +  VP  V AL    V+S++CG N T  I 
Sbjct: 612 GLGNVEDRNVPTLVEALRDRQVQSIACGSNLTAAIC 647



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           P   A  +++    ++CG   +  +T  G +YT G+  +G+LG+    N  +      L 
Sbjct: 518 PTCVAQLVEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKNKSIAIVEGKLK 577

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  V+ +S G  H   +   G +VY +G G  G+LGLGN   +  P
Sbjct: 578 EEFVKEISSGSYHVAALTS-GGSVYTWGKGTNGQLGLGNVEDRNVP 622



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVVTS-----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           ++ACG  H+A +              G L+T+G+GD GRLGH        P  V  L + 
Sbjct: 468 SVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEH 527

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               VSCG   TV +   GK +Y  G   +G+LG
Sbjct: 528 DFVQVSCGRMLTVALTRTGK-IYTMGSSVHGQLG 560



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 39/67 (58%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + I +++ G  H  AVS++GQ+F +G+ +   LG GN  +   P+ V +L    ++ V+ 
Sbjct: 412 VSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVAC 471

Query: 75  GRSHSAA 81
           G  H+AA
Sbjct: 472 GSWHTAA 478



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS+G  H   ++  G+VF WG  S  +LG    ++   P +V +L    ++ V+ 
Sbjct: 305 LDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLDGFLVKFVAC 364

Query: 75  GRSHSAAWT 83
           G   + A T
Sbjct: 365 GEYQTCALT 373


>gi|198477465|ref|XP_002136602.1| GA29094 [Drosophila pseudoobscura pseudoobscura]
 gi|198142893|gb|EDY71606.1| GA29094 [Drosophila pseudoobscura pseudoobscura]
          Length = 243

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 53/86 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG ++S  +T+ G ++T G G+YG+LGHG + N  +P  V+ L    +  V+CG  HT
Sbjct: 156 VPCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSYNEMIPRMVMELMGSTITQVACGNRHT 215

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
           + +   G  VY+FG G  G+LG+ NT
Sbjct: 216 LALVRSGGRVYSFGLGASGQLGIRNT 241



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 4/95 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN---WKVPERVVALNKVHVESVSCGL 470
           IACG  HS  +TS G LY++G   YG+LG  +  +   +  P ++  +    + +++CG 
Sbjct: 49  IACGNNHSLALTSCGELYSWGYNIYGQLGVQSPKDLPHFNAPVQLTTILGTSLATIACGG 108

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           NH+  I+ K  AV+ +G    G+LGL +   +  P
Sbjct: 109 NHSFLIS-KSSAVFGWGKNTCGQLGLNDEQSRAYP 142



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 36/74 (48%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
            +   + + +  +  G E+ + ++N G VF  G  +  QLG G   N   P++V+ L   
Sbjct: 144 QLKTMRTLGVRFVPCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSYNEMIPRMVMELMGS 203

Query: 68  NIRQVSAGRSHSAA 81
            I QV+ G  H+ A
Sbjct: 204 TITQVACGNRHTLA 217


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG +   +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGIECQKQTSPQ 182



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 39.3 bits (90), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|193783741|dbj|BAG53723.1| unnamed protein product [Homo sapiens]
          Length = 503

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 161 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 219

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 220 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 252



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 201 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 260

Query: 67  KNIRQVSAGRSHSAA 81
             +++V+ G +H++A
Sbjct: 261 IRVQRVACGYTHTSA 275



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 1/107 (0%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 181 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 240

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           LG G + N   P RV AL  + V+ V+CG  HT     +G  VY +G
Sbjct: 241 LGLGNSGNQPTPCRVAALQGIRVQRVACGYTHTSAAKTQGGHVYMWG 287



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 114 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 173

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 174 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 200



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L 
Sbjct: 148 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQ 207

Query: 66  NKNIRQVSAGRSHSAA 81
           NK +  ++ G+    A
Sbjct: 208 NKVVVTIACGQMCCMA 223



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 94  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 153

Query: 65  SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG--LPQDIPDHY-GHLQNKPLP 121
           SNK + +V+ G  HS   T+        G+  S  +  G  + Q IP    G LQNK + 
Sbjct: 154 SNKQVIEVACGSYHSLVLTSDG-EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 212

Query: 122 LI 123
            I
Sbjct: 213 TI 214


>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
          Length = 531

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 2/121 (1%)

Query: 386 TGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
            G++    T  Q  P   +N LQ      IACG   S  V SNG +Y +G    G+LG G
Sbjct: 157 CGQVGSGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLG 216

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
              N   P RV AL+ V +  ++CG  HT+ + D+G  +YA+G   YG+LG GN   + +
Sbjct: 217 NNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEG-LLYAWGANTYGQLGTGNKSNQLS 275

Query: 505 P 505
           P
Sbjct: 276 P 276



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG  HS  ++ +G LY +G  + G++G G+T N   P RV   L    V  ++CG   
Sbjct: 133 VACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKMVVGIACGQTS 192

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ +   G+ VY +G    G+LGLGN G + TP
Sbjct: 193 SMAVVSNGE-VYGWGYNGNGQLGLGNNGNQLTP 224



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 39/71 (54%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V I+ G    +AV + G+V+ WG N + QLGLGN  N   P  V AL    I Q++ G 
Sbjct: 183 VVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGY 242

Query: 77  SHSAAWTAPPL 87
           +H+ A T   L
Sbjct: 243 AHTLALTDEGL 253



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 4/89 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H  + T +G +Y +G+  Y +LG+GTT     P +V    L K  VE V+CG +H++ ++
Sbjct: 86  HVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVE-VACGSHHSMALS 144

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             G  +YA+G    G++G G+T  +PTP+
Sbjct: 145 FDGD-LYAWGYNNCGQVGSGSTANQPTPR 172



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A   + I+ I+ G  H LA+++ G ++AWG N+  QLG GN+ N   P  ++    + 
Sbjct: 227 VAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQIMMEKERV 286

Query: 69  IRQVSAGRSHSAA 81
           +   +   +H++A
Sbjct: 287 VEIAACHSAHTSA 299



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG+ H+  +T  G LY +G   YG+LG G   N   P +++   +  VE  +C   HT
Sbjct: 238 IACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQIMMEKERVVEIAACHSAHT 297

Query: 474 VCIADKGKAVYAFG 487
                +   VY +G
Sbjct: 298 SAAKTQSGQVYMWG 311



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIRQVSAG 75
           +V+++ G+ H +A+S  G ++AWG N+  Q+G G+  N   P+ V   L  K +  ++ G
Sbjct: 130 VVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKMVVGIACG 189

Query: 76  RSHSAA 81
           ++ S A
Sbjct: 190 QTSSMA 195



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 4/95 (4%)

Query: 415 ACGFKHSA----VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           AC F  SA     +T N  ++ FG      LG G   +  VP+++ AL    + S+S G 
Sbjct: 24  ACVFGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKISSLSYGS 83

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              V +  +   VYA+G   Y +LG G T    TP
Sbjct: 84  GPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITP 118


>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
 gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
 gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Nomascus leucogenys]
 gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
           paniscus]
 gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
           [Gorilla gorilla gorilla]
 gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; Short=CHC1-L;
           AltName: Full=RCC1-like G exchanging factor; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
 gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Homo sapiens]
 gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
 gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
 gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Homo sapiens]
 gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 216 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 248



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 310

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 311 IEIAACHSTHTSA 323



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 196



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L 
Sbjct: 144 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQ 203

Query: 66  NKNIRQVSAGR 76
           NK +  ++ G+
Sbjct: 204 NKVVVTIACGQ 214



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169


>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 216 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 248



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 310

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 311 IEIAACHSTHTSA 323



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 196



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L 
Sbjct: 144 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQ 203

Query: 66  NKNIRQVSAGR 76
           NK +  ++ G+
Sbjct: 204 NKVVVTIACGQ 214



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169


>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
 gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 2 [Bos taurus]
          Length = 527

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V + G ++ +G    G+
Sbjct: 153 GYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 213 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 271

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 272 NQSYPTP 278



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV   L    V +++CG   
Sbjct: 133 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMC 192

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ + + G+ V+ +G    G+LGLG++G +PTP
Sbjct: 193 SMAVVNTGE-VFVWGYNGNGQLGLGSSGNQPTP 224



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 40/67 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V+I+ G    +AV NTG+VF WG N + QLGLG+  N   P  V AL    +++V+ G 
Sbjct: 183 VVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGY 242

Query: 77  SHSAAWT 83
           +H+   T
Sbjct: 243 AHTLVLT 249



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 216 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 275

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 276 PTPVVVEKDRIIEIAACHSAHTSA 299



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 218 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 277

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            VV      +E  +C   HT     +G  VY +G
Sbjct: 278 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT    VP  +   L+   V  V+CG  H++ +  
Sbjct: 86  HIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTS 145

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 146 DGE-VFAWGYNNSGQVGSGSTANQPIPR 172



 Score = 45.1 bits (105), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L 
Sbjct: 120 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQ 179

Query: 66  NKNIRQVSAGRSHSAA 81
           +K +  ++ G+  S A
Sbjct: 180 SKVVVNIACGQMCSMA 195



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G       P  +   L
Sbjct: 66  RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 126 SNKQVIEVACGSYHSLVLTS 145


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 9/101 (8%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H+A++TS+G LYT+G+G +G LGHG T     P+ V +L    V+ V+CG  HT
Sbjct: 374 IACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESLKGSRVKCVACGPWHT 433

Query: 474 VCIAD-----KGKA----VYAFGDGEYGKLGLGNTGLKPTP 505
             I +     K  +    ++ +GD + GKLG  +  +K  P
Sbjct: 434 AAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIP 474



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  H AVVT+NG ++T+G G  G+LG G  +N   P  V AL   HVES+SCG N+T
Sbjct: 540 ISSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFLNRSTPTLVDALEGRHVESLSCGYNYT 599

Query: 474 VCIA 477
             + 
Sbjct: 600 AAVC 603



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 42/70 (60%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            K+  +  IS G+ HV  V+  G+VF WG   + QLGLG+ +N   P LV AL  +++  
Sbjct: 532 LKSEFVRHISSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFLNRSTPTLVDALEGRHVES 591

Query: 72  VSAGRSHSAA 81
           +S G +++AA
Sbjct: 592 LSCGYNYTAA 601



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IACG  H+A++T  G +Y++GN   GR+G+   +    P+ V +L  +HV+ V+ G  H
Sbjct: 268 SIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGSKH 327

Query: 473 TVCIADKGKAVYAFGDGEY 491
           T  +   G+ +  +G+G Y
Sbjct: 328 TCAVTVSGELI-EWGEGPY 345



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 32/212 (15%)

Query: 293 PDLSESLQSLMHFKFLGILFGVAIR---TKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDT 349
           P  +  L SL    F G  FG  +    T KPLP+ +                  +  + 
Sbjct: 222 PRAACRLDSLKDVFFWGDAFGSILECGDTSKPLPMLV------------------DSTNM 263

Query: 350 LYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQY 409
           L  QS+ A  + H + +T+    E+       G   +GRI   V    S P    +    
Sbjct: 264 LDVQSI-ACGETHAAIITKQG--EVYSW----GNESSGRIGNQVNIKVSRPKVVQSLASL 316

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDY-GRLGHGTTMNWKVPERVVA-LNKVHVESVS 467
           +   +A G KH+  VT +G L  +G G Y G+L       W  P ++ + L+ + V  ++
Sbjct: 317 HVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYARNQW-FPHKLFSPLDGISVVKIA 375

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           CG  HT  I   G+ +Y +GDG +G LG G+T
Sbjct: 376 CGPWHTAIITSSGQ-LYTYGDGTFGVLGHGDT 406



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 4/71 (5%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR--EPQLVLALSNKNIRQV 72
           + +  I+ G  H   ++  G+V++WGN S  +  +GNQ+N +   P++V +L++ +++ V
Sbjct: 264 LDVQSIACGETHAAIITKQGEVYSWGNESSGR--IGNQVNIKVSRPKVVQSLASLHVKDV 321

Query: 73  SAGRSHSAAWT 83
           + G  H+ A T
Sbjct: 322 AYGSKHTCAVT 332



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 1/107 (0%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P    +   Y    ++CG   +  ++  G ++T G+  +G+LG+       V      L
Sbjct: 473 IPTCVDSLTDYDFIQVSCGTALTVALSVTGVVFTSGSSMHGQLGNPHADGKTVSAVEGLL 532

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               V  +S G +H   +   GK V+ +G G+ G+LGLG+   + TP
Sbjct: 533 KSEFVRHISSGSSHVAVVTTNGK-VFTWGKGKEGQLGLGDFLNRSTP 578



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 11/93 (11%)

Query: 413 AIACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
            +ACG  H+A +               L+T+G+ D G+LGH       +P  V +L    
Sbjct: 425 CVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYD 484

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              VSCG   TV ++  G  V+  G   +G+LG
Sbjct: 485 FIQVSCGTALTVALSVTG-VVFTSGSSMHGQLG 516


>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
           troglodytes]
          Length = 552

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 160 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 218

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 219 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 251



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 180 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 239

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 240 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 298

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 299 NQSYPTP 305



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 200 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 259

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 260 IRVQRVACGYAHTLVLT 276



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 254 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 313

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 314 IEIAACHSTHTSA 326



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 245 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 304

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 305 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 338



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 113 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 172

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 173 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 199



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L NK + 
Sbjct: 152 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 211

Query: 71  QVSAGR 76
            ++ G+
Sbjct: 212 TIACGQ 217



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 93  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 152

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 153 SNKQVIEVACGSYHSLVLTS 172


>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
          Length = 451

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 162 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 220

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 221 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 253



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 386 TGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+LG G
Sbjct: 186 SGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 245

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK-- 502
            + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN   +  
Sbjct: 246 NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKSNQSY 304

Query: 503 PTP 505
           PTP
Sbjct: 305 PTP 307



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 202 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 262 IRVQRVACGYAHTLVLT 278



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 256 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 315

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 316 IEIAACHSTHTSA 328



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 247 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 306

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 174

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 175 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 201



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L NK + 
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 213

Query: 71  QVSAGR 76
            ++ G+
Sbjct: 214 TIACGQ 219



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 95  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 154

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 155 SNKQVIEVACGSYHSLVLTS 174


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V + G +Y +G    G+
Sbjct: 153 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 213 LGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 271

Query: 501 LKPTP 505
            +  P
Sbjct: 272 NQSYP 276



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 133 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQM 191

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ VY +G    G+LGLG++G +PTP
Sbjct: 192 CSMAVVNTGE-VYVWGYNGNGQLGLGSSGNQPTP 224



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P  VV      +E  +C L HT
Sbjct: 238 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHT 297

Query: 474 VCIADKGKAVYAFG 487
                +G  VY +G
Sbjct: 298 SAAKTQGGHVYMWG 311



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV NTG+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 173 RVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQG 232

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 233 IRVQRVACGYAHTLVLT 249



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 216 GSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 275

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 276 PAPVVVEKDRIIEIAACHLAHTSA 299



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  +P  +   L+   V  V+CG  H++ +  
Sbjct: 86  HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTS 145

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 146 DGE-VFAWGYNNSGQVGSGSTANQPIPR 172



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  + +++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK + 
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVV 184

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 185 NIACGQMCSMA 195



 Score = 42.0 bits (97), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 66  RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 126 SNKQVTEVACGSYHSLVLTS 145


>gi|405964349|gb|EKC29846.1| Serine/threonine-protein kinase Nek9 [Crassostrea gigas]
          Length = 580

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 56/100 (56%), Gaps = 11/100 (11%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGD-----YGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           IA G  H AVVT    +YT+ N        G+LGHG T  +K P++V  L    V  VSC
Sbjct: 97  IAAGHSHFAVVTMEKEVYTWANVQGGSEIVGQLGHGNTSAYKAPKKVEELED--VIQVSC 154

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGL---GNTGLKPTP 505
           G + T C++D+GK VYAFG   YG LGL    +T L P P
Sbjct: 155 GEDFTFCVSDEGK-VYAFGSNYYGCLGLEEEDDTVLSPVP 193



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 5/108 (4%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           VPL F +     E  I+CG  H A +T +G +YT+G G++GRLG G+  ++  P++V   
Sbjct: 192 VPLPFFSSNPVEE--ISCGENHVAALTKDGEVYTWGCGEFGRLGLGSEDDFSTPQKVATP 249

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKPT 504
            K   + V CG + T  I   G+ V A G  E+ KLG  +  +GL+ +
Sbjct: 250 GKHLFKHVVCGSDGTFLITVNGR-VLAAGSNEHNKLGFNSETSGLRKS 296



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 6/96 (6%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG---HGTTMNWKVPERVVALNKVHVESVSCGL 470
           ++CG   +  V+  G +Y FG+  YG LG      T+   VP    + N V  E +SCG 
Sbjct: 152 VSCGEDFTFCVSDEGKVYAFGSNYYGCLGLEEEDDTVLSPVPLPFFSSNPV--EEISCGE 209

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           NH   +   G+ VY +G GE+G+LGLG+     TPQ
Sbjct: 210 NHVAALTKDGE-VYTWGCGEFGRLGLGSEDDFSTPQ 244



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 35/67 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +P F +  + +IS G  HV A++  G+V+ WG     +LGLG++ ++  PQ V       
Sbjct: 194 LPFFSSNPVEEISCGENHVAALTKDGEVYTWGCGEFGRLGLGSEDDFSTPQKVATPGKHL 253

Query: 69  IRQVSAG 75
            + V  G
Sbjct: 254 FKHVVCG 260


>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
 gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
          Length = 1175

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 5/112 (4%)

Query: 398 SVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERV 455
           S+P TF   L+  E   +ACG  H+  +T +G ++TFG G YG+LGH  +T+   VP ++
Sbjct: 277 SIP-TFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKI 335

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG--LKPTP 505
                  V  ++CG  HT+ +  K   ++AFG G   +LG+G+T   L P P
Sbjct: 336 TEFMGNVVTQIACGRFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLPCP 387



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 13/108 (12%)

Query: 394 TGGQSVPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFG---NGDYGRLGHGTTMNW 449
           +GGQ   L     L++Y   ++ACG  H+A +T NG L+T+G   NG  GR G  T +  
Sbjct: 79  SGGQ---LAKVVALEHYRIISVACGAYHNAAITYNGLLFTWGCNSNGQLGREGDDTGV-- 133

Query: 450 KVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
              + V AL+   V  VS G+ HT+ + D  + V+AFG    G+LGLG
Sbjct: 134 ---KLVRALSDHKVVQVSLGVEHTLVLTDTAR-VFAFGSNLKGQLGLG 177



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG--NQINYREPQLV 61
           T  + + A  +  +V +S+G EH L +++T +VFA+G+N   QLGLG  ++ +   PQ +
Sbjct: 131 TGVKLVRALSDHKVVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGLGYSSEQSVSIPQQI 190

Query: 62  LALSNKNIRQVSAGRSHSAAWTA 84
           L LS   +R++ AG  HS   T 
Sbjct: 191 LCLSGLPVRRIVAGGWHSFVLTV 213



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 5/91 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG+ H+  +T +G +Y+ G  ++ +LGHG +       +VVAL    + SV+CG  H 
Sbjct: 47  ITCGYTHTVFLTIDGEVYSCGCNEFQQLGHGQSGGQLA--KVVALEHYRIISVACGAYHN 104

Query: 474 VCIADKGKAVYAFGDGEYGKLGL--GNTGLK 502
             I   G  ++ +G    G+LG    +TG+K
Sbjct: 105 AAITYNG-LLFTWGCNSNGQLGREGDDTGVK 134



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 3/92 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
           ++ G +H+ V+T    ++ FG+   G+LG G  +  +  +P++++ L+ + V  +  G  
Sbjct: 147 VSLGVEHTLVLTDTARVFAFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGW 206

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
           H+  +   G ++YA+G   YG+LGL   G  P
Sbjct: 207 HSFVLTVSG-SLYAWGSNNYGQLGLSYFGSSP 237



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 2   SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           SG     + A ++  I+ ++ G  H  A++  G +F WG NS+ Q  LG + +    +LV
Sbjct: 79  SGGQLAKVVALEHYRIISVACGAYHNAAITYNGLLFTWGCNSNGQ--LGREGDDTGVKLV 136

Query: 62  LALSNKNIRQVSAGRSHSAAWT 83
            ALS+  + QVS G  H+   T
Sbjct: 137 RALSDHKVVQVSLGVEHTLVLT 158


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +VSCG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV +S G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG +   +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGIECQKQTSPQ 182



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 7   RHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +   P+ V 
Sbjct: 230 RYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289

Query: 63  ALSNKNIRQVSAGRSHSAAW 82
            L    + Q++ GR H++A+
Sbjct: 290 ELMGSIVTQIACGRQHTSAF 309



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P +        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 1/85 (1%)

Query: 394 TGGQSVPLTFANRLQYYE-AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVP 452
           T    VP+   ++LQ      I+CG  H AV+TS   LYT+G G  GRLGHG   + K P
Sbjct: 523 TSDGKVPILVRDKLQGETVEEISCGTHHVAVLTSRSELYTWGRGANGRLGHGDIEDQKTP 582

Query: 453 ERVVALNKVHVESVSCGLNHTVCIA 477
             V AL + HV++++CG N T CI 
Sbjct: 583 ILVEALKERHVKNIACGANFTTCIC 607



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  V+ +G LYT+G+G +  G LGHGT ++  +P+RV   L    V S++CG 
Sbjct: 320 VACGEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGA 379

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   GK ++ FGDG  G LG G+
Sbjct: 380 WHTALITSNGK-LFTFGDGTLGVLGHGD 406



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 15/123 (12%)

Query: 397 QSVPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
            S+P      L+ ++  +IACG  H+A++TSNG L+TFG+G  G LGHG   +   P+ +
Sbjct: 357 HSIPKRVTGPLEGHQVVSIACGAWHTALITSNGKLFTFGDGTLGVLGHGDRESVAYPKEL 416

Query: 456 VALNKVHVESVSCGLNHTVCIAD------------KGKAVYAFGDGEYGKLGLGN--TGL 501
             L+      V+CG+ HT  I +              K ++ +GDG+  +LG  N  T L
Sbjct: 417 QLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYL 476

Query: 502 KPT 504
           +PT
Sbjct: 477 QPT 479



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 7/109 (6%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           P   A    Y    +ACG   +  +T++G+++T G+  YG+LG+ T+ + KVP  ++  +
Sbjct: 478 PTCVAALADYNFLQVACGHSLTVALTASGHVFTMGSKAYGQLGNPTS-DGKVP--ILVRD 534

Query: 460 KVH---VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           K+    VE +SCG +H   +  + + +Y +G G  G+LG G+   + TP
Sbjct: 535 KLQGETVEEISCGTHHVAVLTSRSE-LYTWGRGANGRLGHGDIEDQKTP 582



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I  G  H A+VT  G ++T+G    GRLGHG   ++  P  V +L    V  V+CG  HT
Sbjct: 268 IEPGVSHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSVSFVACGEYHT 327

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             ++  G  +Y +GDG +  G LG G
Sbjct: 328 CAVSISGD-LYTWGDGTHNAGILGHG 352



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 14/95 (14%)

Query: 414 IACGFKHSAVVTS-------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           +ACG  H+A +               +  L+T+G+GD  RLGH     +  P  V AL  
Sbjct: 427 VACGVWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALAD 486

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            +   V+CG + TV +   G  V+  G   YG+LG
Sbjct: 487 YNFLQVACGHSLTVALTASGH-VFTMGSKAYGQLG 520



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 36/62 (58%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I  G  H+  V+  G++F WG +S  +LG G   +Y +P+LV +L+  ++  V+ G  H+
Sbjct: 268 IEPGVSHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSVSFVACGEYHT 327

Query: 80  AA 81
            A
Sbjct: 328 CA 329



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 37/59 (62%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           + +IS GT HV  +++  +++ WG  ++ +LG G+  + + P LV AL  ++++ ++ G
Sbjct: 541 VEEISCGTHHVAVLTSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKERHVKNIACG 599



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 29/50 (58%)

Query: 35  QVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84
           ++F WG+    +LG  N+  Y +P  V AL++ N  QV+ G S + A TA
Sbjct: 455 KLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHSLTVALTA 504


>gi|148698628|gb|EDL30575.1| HECT domain containing 3, isoform CRA_b [Mus musculus]
          Length = 883

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 539 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 598

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 599 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 654

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + GV +  F      E  F       ++  ++ GG 
Sbjct: 655 SWSKDFPAVDSVLVKLLEV-----MEGVDKETFEFKFGKELTFTTVLSDQQVVELIPGGT 709

Query: 398 SVPLTFANRLQYYE 411
            + + + +R ++ +
Sbjct: 710 GIVVEYEDRSRFIQ 723


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 61/97 (62%), Gaps = 3/97 (3%)

Query: 402 TFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           T  + L+  E   IACG  HS  V S+G ++++G+G  G LGHG  +   +P+++++LN 
Sbjct: 255 TLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMSLNG 314

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
            H+ +V+CG  +T+ +A  G  V+++G G  G+LG G
Sbjct: 315 KHIMAVACGECYTIAVA--GDDVWSWGLGGNGELGYG 349



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           AI  G +H+  +T+ G +Y++G GD G+LGHG T+ +  P  +  L    V  ++CG  H
Sbjct: 215 AIHPGGRHAMALTAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMH 274

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           ++ +   GK ++++GDG  G LG GN   +  P+
Sbjct: 275 SIAVLSDGK-IFSWGDGSNGALGHGNNLAQLLPK 307



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 7   RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
           R IP    + +  +++  G  H +A++  G+V++WG     QLG GN + Y +P L+  L
Sbjct: 201 RQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDEL 260

Query: 65  SNKNIRQVSAGRSHSAA 81
            +K + +++ G  HS A
Sbjct: 261 KSKEVTKIACGAMHSIA 277



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC--GLN 471
           IACG+    VV+ NG ++  G G  G LG G   +  VP ++  L  V V +V+   G  
Sbjct: 162 IACGYDSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGR 221

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           H + +  +GK VY++G G+ G+LG GNT
Sbjct: 222 HAMALTAEGK-VYSWGCGDRGQLGHGNT 248



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 43/73 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I   K+  +  I+ G  H +AV + G++F+WG+ S+  LG GN +    P+ +++L+ K+
Sbjct: 257 IDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMSLNGKH 316

Query: 69  IRQVSAGRSHSAA 81
           I  V+ G  ++ A
Sbjct: 317 IMAVACGECYTIA 329



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNH 472
           +ACG+  S  V++NG ++ +G+GD  RLG G       P  +   L    ++ V   L H
Sbjct: 372 VACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFH 431

Query: 473 TVCIADKGKAVYAFGDGEYGKLG 495
            + I + G+ VY +G  E G +G
Sbjct: 432 ALAIDENGQ-VYIWGSQEIGPVG 453



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQVSAG 75
           I +++ G     AVS  G+V+AWG+    +LGLGN+    +P+ +   L  K I++V A 
Sbjct: 369 ITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVAS 428

Query: 76  RSHSAA 81
             H+ A
Sbjct: 429 LFHALA 434


>gi|156369827|ref|XP_001628175.1| predicted protein [Nematostella vectensis]
 gi|156215145|gb|EDO36112.1| predicted protein [Nematostella vectensis]
          Length = 340

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 25/185 (13%)

Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGELLS------GAVPLLVRTPNGVADTGYNRDRYI 290
           W+VK +GEG  D GG F +++ EM  EL          +P  VRT N     G  +D Y+
Sbjct: 11  WEVKFIGEGIIDQGGGFRESLVEMTDELCPPEFGSLEVLPFFVRTANNKDAVGDYQDSYL 70

Query: 291 LNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVT----FTDLED 346
            +P  +E       +++LG + G   R+ + + L   P +WKL+V E VT    F D+++
Sbjct: 71  PSPSCTE----WSVYEWLGKILGALYRSDENMTLTFPPFLWKLLVGEHVTWAKDFVDVDE 126

Query: 347 NDTLYAQSL-RAIRDIHLSGV-TEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFA 404
              ++   L R   D++++    E  F  ++           G    ++ GG  V +  A
Sbjct: 127 AAVMFTDELERMDEDLYVATYRNECKFSTVLS---------DGTTKELIPGGNDVTVGPA 177

Query: 405 NRLQY 409
           +R ++
Sbjct: 178 DRQRF 182


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V + G ++ +G    G+
Sbjct: 153 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 213 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 271

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 272 NQSYPTP 278



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 133 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQM 191

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ V+ +G    G+LGLG++G +PTP
Sbjct: 192 CSMAVVNTGE-VFVWGYNGNGQLGLGSSGNQPTP 224



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV NTG+VF WG N + QLGLG+  N   P  V AL  
Sbjct: 173 RVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQG 232

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 233 IRVQRVACGYAHTLVLT 249



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 216 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 275

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 276 PTPVVVEKDRIIEIAACHSAHTSA 299



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 218 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 277

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            VV      +E  +C   HT     +G  VY +G
Sbjct: 278 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT    VP  +   L+   V  V+CG  H++ +  
Sbjct: 86  HIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTS 145

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 146 DGE-VFAWGYNNSGQVGSGSTANQPIPR 172



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L 
Sbjct: 120 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQ 179

Query: 66  NKNIRQVSAGRSHSAA 81
           NK +  ++ G+  S A
Sbjct: 180 NKVVVNIACGQMCSMA 195



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G       P  +   L
Sbjct: 66  RRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 126 SNKQVIEVACGSYHSLVLTS 145


>gi|402909868|ref|XP_003917626.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Papio
           anubis]
          Length = 225

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +H+AVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHTAVVTGNNKLYVFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G  E G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNEEGQLGLGDTEERNT 129



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 40/68 (58%)

Query: 12 FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
          FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32 FKNDVPVHLSCGDEHTAVVTGNNKLYVFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKL 91

Query: 72 VSAGRSHS 79
           + GR+H+
Sbjct: 92 AACGRNHT 99



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   P  V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPHQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWTA 84
            +  +S G  HSA  T+
Sbjct: 191 PVSWISCGYYHSAFVTS 207



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G V+A G N + QLGLG+        ++    S  
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNEEGQLGLGDTEERNTFHVISFFTSEH 140

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156


>gi|301779734|ref|XP_002925282.1| PREDICTED: probable E3 ubiquitin-protein ligase KIAA0614-like
            [Ailuropoda melanoleuca]
          Length = 4245

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 148/338 (43%), Gaps = 36/338 (10%)

Query: 105  PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
            P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 3743 PADAADPRVACLLNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTPMYARSIAALL 3800

Query: 164  HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
              +   +F     T+ + R +  T+     +  P +T+  L     + + +    F Q +
Sbjct: 3801 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLEIVGGEIRASENSYFCQAA 3859

Query: 220  RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
            RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 3860 RQLASVSSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 3919

Query: 273  VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L P  W
Sbjct: 3920 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDLLPSFW 3975

Query: 332  KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI----IPLECFEGA--- 383
            K +V EP+    DL++ D L    ++    I+     EA   EI    + +E  EG    
Sbjct: 3976 KTLVGEPLDPDQDLQEADILTYNYVKKFESINDETELEALCAEIASQHLAIESPEGPNKP 4035

Query: 384  -------SWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
                   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 4036 CCRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 4072


>gi|74181653|dbj|BAE32546.1| unnamed protein product [Mus musculus]
          Length = 861

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 517 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLVDMSEELCPSSADTPVPLPFFVRTANQG 576

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 577 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 632

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + GV +  F      E  F       ++  ++ GG 
Sbjct: 633 SWSKDFPAVDSVLVKLLEV-----MEGVDKETFEFKFGKELTFTTVLSDQQVVELIPGGT 687

Query: 398 SVPLTFANRLQYYE 411
            + + + +R ++ +
Sbjct: 688 GIVVEYEDRSRFIQ 701


>gi|405961464|gb|EKC27265.1| Serine/threonine-protein kinase Nek9 [Crassostrea gigas]
          Length = 627

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 56/100 (56%), Gaps = 11/100 (11%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGD-----YGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           IA G  H AVVT    +YT+ N        G+LGHG T  +K P++V  L  V    VSC
Sbjct: 351 IAAGHSHFAVVTMEKEVYTWANVQGGSEIVGQLGHGNTSAYKAPKKVEELEDVI--QVSC 408

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGL---GNTGLKPTP 505
           G + T C++D+GK VYAFG   YG LGL    +T L P P
Sbjct: 409 GEDFTFCVSDEGK-VYAFGSNYYGCLGLEEEDDTVLSPVP 447



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H A +T +G +YT+G G++GRLG G+  ++  P++V    K   + V CG + T
Sbjct: 459 ISCGENHVAALTKDGEVYTWGCGEFGRLGLGSEDDFSTPQKVATPGKHLFKHVVCGSDGT 518

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN--TGLKPTP 505
             I   G+ V A G  E+ KLG  +  +GL+ + 
Sbjct: 519 FLITVNGR-VLAAGSNEHNKLGFNSETSGLRKSK 551



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 6/96 (6%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG---HGTTMNWKVPERVVALNKVHVESVSCGL 470
           ++CG   +  V+  G +Y FG+  YG LG      T+   VP    + N V  E +SCG 
Sbjct: 406 VSCGEDFTFCVSDEGKVYAFGSNYYGCLGLEEEDDTVLSPVPLPFFSSNPV--EEISCGE 463

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           NH   +   G+ VY +G GE+G+LGLG+     TPQ
Sbjct: 464 NHVAALTKDGE-VYTWGCGEFGRLGLGSEDDFSTPQ 498



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 10/122 (8%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +P F +  + +IS G  HV A++  G+V+ WG     +LGLG++ ++  PQ V       
Sbjct: 448 LPFFSSNPVEEISCGENHVAALTKDGEVYTWGCGEFGRLGLGSEDDFSTPQKVATPGKHL 507

Query: 69  IRQVSAGRSHSAAWTAP--PLPPHTPGH------TPSSSLRLGLPQ--DIPDHYGHLQNK 118
            + V  G   +   T     L   +  H      + +S LR    Q  DIP  Y     K
Sbjct: 508 FKHVVCGSDGTFLITVNGRVLAAGSNEHNKLGFNSETSGLRKSKVQVYDIPCKYTFSTVK 567

Query: 119 PL 120
           PL
Sbjct: 568 PL 569


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+AVVTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 421 SSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVRAACGVW 480

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGK-IFTWGDGDKGRLGHGDKETRLVP 525



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+GNG  ++G  GHG  ++  +P+R+   L  +HV S+SCG 
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGP 427

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 428 WHTAVVTSAGQ-LFTFGDGSFGVLGHGD 454



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 5/101 (4%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA RL      I+CG +H+ +VT  G +Y++G    GRLGHG   +   P+ + AL 
Sbjct: 304 PLEFAGRLDVQN--ISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALA 361

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +G+G   +G  G GN
Sbjct: 362 HMNIELVACGEYHTCAVTLSGD-LYTWGNGTFNFGLSGHGN 401



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 14/128 (10%)

Query: 363 LSGVTEANFPEIIPLECFE------------GASWTGRITPIVTGGQSVPLTFANRL-QY 409
           ++ + E NF ++    CF             G+S  G++      G  VP     +L + 
Sbjct: 528 VASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGM-VPARVEGKLHKN 586

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCG 469
           +   I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V SV CG
Sbjct: 587 FVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCG 646

Query: 470 LNHTVCIA 477
           +N T  I 
Sbjct: 647 INFTAAIC 654



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A+ ++     +ACG   +  +T++G++YT G+  YG+LG+    +  VP RV   
Sbjct: 524 VPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGK 582

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE +SCG  H   +  + + VY +G G  G+LG G+T  + +P
Sbjct: 583 LHKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRNSP 629



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG      VP  V +L + +
Sbjct: 476 ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVEPN 535

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG   TV +   G  VY  G   YG+LG
Sbjct: 536 FCQVACGHCFTVALTTSGH-VYTMGSSVYGQLG 567



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS G  H   V+  G+V++WG  S  +LG G   +  +P+L+ AL++ NI  V+ 
Sbjct: 311 LDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVAC 370

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 371 GEYHTCAVT 379



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K +R V  G 
Sbjct: 588 VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGI 647

Query: 77  SHSAA 81
           + +AA
Sbjct: 648 NFTAA 652



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 415 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVR 474

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 475 AACGVWHTAA 484



 Score = 38.5 bits (88), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 23/116 (19%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  V  + G  H  AV             ++G++F WG+    +LG G++  
Sbjct: 462 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKET 521

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGH--TPSSSL--RLGLPQ 106
              P  V +L   N  QV+ G   + A T       T GH  T  SS+  +LG PQ
Sbjct: 522 RLVPTCVASLVEPNFCQVACGHCFTVALT-------TSGHVYTMGSSVYGQLGNPQ 570


>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
          Length = 556

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 162 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 220

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 221 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 253



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 182 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 241

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 242 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 300

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 301 NQSYPTP 307



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 202 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 262 IRVQRVACGYAHTLVLT 278



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 256 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 315

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 316 IEIAACHSTHTSA 328



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 247 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 306

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 174

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 175 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 201



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L NK + 
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 213

Query: 71  QVSAGR 76
            ++ G+
Sbjct: 214 TIACGQ 219



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 95  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 154

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 155 SNKQVIEVACGSYHSLVLTS 174


>gi|255558248|ref|XP_002520151.1| protein with unknown function [Ricinus communis]
 gi|223540643|gb|EEF42206.1| protein with unknown function [Ricinus communis]
          Length = 387

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 3/104 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           P+TF +   +    I+ G+ HS  V+  G ++T G+G +G+LGHG   +   P +V    
Sbjct: 101 PVTFLD--SFVITHISAGWSHSGFVSDKGCVFTCGDGSFGQLGHGDNNSHATPVQVSYFA 158

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
             HV  ++CG+ H++ +  KG  VY FG G+ G+LG+    +K 
Sbjct: 159 NRHVHQIACGMRHSLVLL-KGNQVYGFGSGKRGQLGISKDKIKS 201



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 412 AAIACGFKHSAVVTS-NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           +++ACG  H   + S +G + T+G G  G+LGHG  ++   P+ V  L+   +  +S G 
Sbjct: 58  SSLACGGAHVIALNSGDGKVLTWGRGTSGQLGHGNMLSSVHPQPVTFLDSFVITHISAGW 117

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +H+  ++DKG  V+  GDG +G+LG G+     TP
Sbjct: 118 SHSGFVSDKG-CVFTCGDGSFGQLGHGDNNSHATP 151



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 17  IVDISVGTEHVLAV-SNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           I  ++ G  HV+A+ S  G+V  WG  +  QLG GN ++   PQ V  L +  I  +SAG
Sbjct: 57  ISSLACGGAHVIALNSGDGKVLTWGRGTSGQLGHGNMLSSVHPQPVTFLDSFVITHISAG 116

Query: 76  RSHSA 80
            SHS 
Sbjct: 117 WSHSG 121



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 34/63 (53%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  IS G  H   VS+ G VF  G+ S  QLG G+  ++  P  V   +N+++ Q++ G 
Sbjct: 110 ITHISAGWSHSGFVSDKGCVFTCGDGSFGQLGHGDNNSHATPVQVSYFANRHVHQIACGM 169

Query: 77  SHS 79
            HS
Sbjct: 170 RHS 172


>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 555

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 216 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 248



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 310

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 311 IEIAACHSTHTSA 323



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 196



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L NK + 
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208

Query: 71  QVSAGR 76
            ++ G+
Sbjct: 209 TIACGQ 214



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169


>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Loxodonta africana]
          Length = 1100

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 5/87 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT  G LYTFG  + G+LG      +N + P+ V  +++  ++ V+CG  
Sbjct: 191 ISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGISEKVIQ-VACGGG 249

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           HTV + +  KAVY FG G +G+LGLG+
Sbjct: 250 HTVVLTE--KAVYTFGQGRFGQLGLGS 274



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV--ALNKVHVESVSCGLN 471
           +ACG  H+ V+T    +YTFG G +G+LG G+ + ++ PE  +   +    +  +SCG N
Sbjct: 244 VACGGGHTVVLTEKA-VYTFGQGRFGQLGLGSFI-FQAPEPAILEHVKDQKIRHISCGEN 301

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HT  I D G  +Y FGDG +GKLGLG
Sbjct: 302 HTALITDVGH-MYTFGDGRHGKLGLG 326



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 4/97 (4%)

Query: 403 FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           F N +  Y   ++CG +H+A++T N  LY FG+ ++G+LG G+      P  V AL    
Sbjct: 28  FKNDVPIY---LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEK 84

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
           V+  +CG NHT+ ++ +G  VYA G    G+LGLG+T
Sbjct: 85  VKLAACGRNHTL-VSTEGGNVYATGGNNEGQLGLGDT 120



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G++YTFG+G +G+LG G     N  VP      +K  +  V+CG  
Sbjct: 296 ISCGENHTALITDVGHMYTFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGC 355

Query: 472 HTVCIA 477
           H +  A
Sbjct: 356 HMLIFA 361



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 41/72 (56%)

Query: 12 FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
          FKN   + +S G EH   ++   +++ +G+N+  QLGLG++     P  V AL ++ ++ 
Sbjct: 28 FKNDVPIYLSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKL 87

Query: 72 VSAGRSHSAAWT 83
           + GR+H+   T
Sbjct: 88 AACGRNHTLVST 99



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K+  +   + G  H L  +  G V+A G N++ QLGLG+        L+   ++++
Sbjct: 77  VKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTSRH 136

Query: 69  -IRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 137 KIKQLSAGANISAALT 152



 Score = 38.9 bits (89), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G     A++  G++F WG+NS+ Q+GL +  N   P+ V     K
Sbjct: 129 ISFFTSRHKIKQLSAGANISAALTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTV--GK 186

Query: 68  NIRQVSAGRSHSAAWT 83
            I  +S G  HSA  T
Sbjct: 187 PISWISCGYYHSAFVT 202



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ--INYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G     +LGL ++  IN+R+PQLV  +S K I QV+ G  
Sbjct: 191 ISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGISEKVI-QVACGGG 249

Query: 78  HSAAWT 83
           H+   T
Sbjct: 250 HTVVLT 255


>gi|74225006|dbj|BAE38213.1| unnamed protein product [Mus musculus]
          Length = 861

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 517 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 576

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 577 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 632

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + GV +  F      E  F       ++  ++ GG 
Sbjct: 633 SWSKDFPAVDSVLVKLLEV-----MEGVDKETFEFKFGKELTFTTVLSDQQVVELIPGGT 687

Query: 398 SVPLTFANRLQYYE 411
            + + + +R ++ +
Sbjct: 688 GIVVEYEDRSRFIQ 701


>gi|30424882|ref|NP_780453.1| E3 ubiquitin-protein ligase HECTD3 [Mus musculus]
 gi|109892197|sp|Q3U487.2|HECD3_MOUSE RecName: Full=E3 ubiquitin-protein ligase HECTD3; AltName:
           Full=HECT domain-containing protein 3
 gi|26341916|dbj|BAC34620.1| unnamed protein product [Mus musculus]
 gi|47124596|gb|AAH70411.1| HECT domain containing 3 [Mus musculus]
 gi|74194514|dbj|BAE37300.1| unnamed protein product [Mus musculus]
 gi|74199280|dbj|BAE33170.1| unnamed protein product [Mus musculus]
 gi|74212849|dbj|BAE33384.1| unnamed protein product [Mus musculus]
 gi|74221272|dbj|BAE42122.1| unnamed protein product [Mus musculus]
 gi|74226594|dbj|BAE23948.1| unnamed protein product [Mus musculus]
          Length = 861

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 517 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 576

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 577 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 632

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + GV +  F      E  F       ++  ++ GG 
Sbjct: 633 SWSKDFPAVDSVLVKLLEV-----MEGVDKETFEFKFGKELTFTTVLSDQQVVELIPGGT 687

Query: 398 SVPLTFANRLQYYE 411
            + + + +R ++ +
Sbjct: 688 GIVVEYEDRSRFIQ 701


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 54/98 (55%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G++  G++      G+   L     L  +   I+CG  H A VTS   LYT+G G  GRL
Sbjct: 337 GSTENGQLGNPNAAGKVPTLVQDKLLGEFIEEISCGAHHVAAVTSRSELYTWGKGSNGRL 396

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           GHG T + K P  V+AL   H++++SCG N T C+ ++
Sbjct: 397 GHGDTDDRKSPTLVLALKDRHLKNISCGSNFTSCVCNQ 434



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 11/103 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+ TSNG L+TFG+G +G LGHG   +   P+ V  L+ +    V+CG+ H
Sbjct: 202 SVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQESVMYPKEVQLLSGLKTVKVACGVWH 261

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGNTG--LKPT 504
           T  I +             ++ +GDG+  +LG GN    LKPT
Sbjct: 262 TAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPT 304



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H++ V+     +T+G+G +  G LGHG  ++  +P+ V   L+ + V SV+CG 
Sbjct: 148 VACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGS 207

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK ++ FGDG +G LG G+
Sbjct: 208 WHSALATSNGK-LFTFGDGTFGVLGHGD 234



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 3/100 (3%)

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVES 465
           ++Y    IACG   +  +T++G+++T G+ + G+LG+      KVP  V   L    +E 
Sbjct: 310 IEYNFQQIACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAG-KVPTLVQDKLLGEFIEE 368

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +SCG +H   +  + + +Y +G G  G+LG G+T  + +P
Sbjct: 369 ISCGAHHVAAVTSRSE-LYTWGKGSNGRLGHGDTDDRKSP 407



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 42/65 (64%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I +IS G  HV AV++  +++ WG  S+ +LG G+  + + P LVLAL +++++ +S G 
Sbjct: 366 IEEISCGAHHVAAVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISCGS 425

Query: 77  SHSAA 81
           + ++ 
Sbjct: 426 NFTSC 430



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 11/99 (11%)

Query: 414 IACGFKHSAVV----------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  H+A +           S+  L+T+G+GD  RLGHG    +  P RV  L + + 
Sbjct: 255 VACGVWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNF 314

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           + ++CG   TV +   G  V+  G  E G+LG  N   K
Sbjct: 315 QQIACGHTMTVALTTSGH-VFTMGSTENGQLGNPNAAGK 352



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I  G  H A+V+  G ++T+G    GRLGHG   ++  P  V   + V ++ V+CG  HT
Sbjct: 96  IVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDKDFGKPHLVEFPDVVTLDIVACGEFHT 155

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             ++ K    + +GDG +  G LG GN
Sbjct: 156 SAVS-KCDNFFTWGDGTHNVGLLGHGN 181



 Score = 41.6 bits (96), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 35/67 (52%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + DI  GT H+  VS  G+VF WG  S  +LG G   ++ +P LV       +  V+ 
Sbjct: 91  LDVRDIVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDKDFGKPHLVEFPDVVTLDIVAC 150

Query: 75  GRSHSAA 81
           G  H++A
Sbjct: 151 GEFHTSA 157


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V+S+G +YT+G   YG+LGHG   +  VP ++ AL    +  +S G  HT
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHT 297

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +A  GK +Y +G  ++G++G+G+     +P
Sbjct: 298 MALAADGK-LYGWGWNKFGQVGVGDNEDHCSP 328



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 5/98 (5%)

Query: 405 NRLQYYEAA----IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
            ++Q +E      IA G +H+A VT +G LY +G G YG LG G   +  +PE+V ++N 
Sbjct: 173 QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNG 232

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +  V+CG  HT+ ++  G ++Y +G  +YG+LG G+
Sbjct: 233 QKMVLVACGWRHTITVSSSG-SIYTYGWSKYGQLGHGD 269



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   VT  G+++++G    G+LG G T +  +P+++ A   V V+ ++ G  HT
Sbjct: 134 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHT 193

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + + G  +Y +G G YG LGLG+   +  P+
Sbjct: 194 AAVTEDGD-LYGWGWGRYGNLGLGDRDDRLIPE 225



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 412 AAIACGFKHSAVVTSNG-YLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + + CG  H+   +     LY++G GD+GRLGHG + +   P+ + AL  V +  ++CG 
Sbjct: 79  SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGD 138

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +H + +   G  V+++G  + G+LGLGNT     PQ
Sbjct: 139 SHCLAVTVAGH-VHSWGRNQNGQLGLGNTEDSLLPQ 173



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A + + I  I+ G  H LAV+  G V +WG N + QLGLGN  +   PQ + A     
Sbjct: 123 IQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR 182

Query: 69  IRQVSAGRSHSAA 81
           ++ ++AG  H+AA
Sbjct: 183 VKMIAAGAEHTAA 195



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS----CG 469
           I+ G  HS  + S G + ++G G+ G+LGHG   +  VP  + A        V+    CG
Sbjct: 25  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +HT   +D+   +Y++G G++G+LG GN+     PQ
Sbjct: 85  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQ 121



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G++H+  + ++G LY +G   +G++G G   +   P +V   N+  V  V+CG  HT
Sbjct: 290 ISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHT 349

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + + +  K V+++G G  G+LG G 
Sbjct: 350 LALTEA-KNVFSWGRGTSGQLGHGE 373



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I AF+ + +  I+ G EH  AV+  G ++ WG      LGLG++ +   P+ V +++ 
Sbjct: 173 QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNG 232

Query: 67  KNIRQVSAGRSHS 79
           + +  V+ G  H+
Sbjct: 233 QKMVLVACGWRHT 245



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 41/75 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K+  I  IS G  H +A++  G+++ WG N   Q+G+G+  ++  P  V   + + 
Sbjct: 279 LEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQK 338

Query: 69  IRQVSAGRSHSAAWT 83
           + QV+ G  H+ A T
Sbjct: 339 VVQVACGWRHTLALT 353



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           V + F N  +  +  +ACG++H+  +T    ++++G G  G+LGHG  ++  +P+ + AL
Sbjct: 329 VQVNFPNEQKVVQ--VACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDAL 386

Query: 459 N 459
           +
Sbjct: 387 S 387



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN--IRQVSA 74
           +V ++ G  H LA++    VF+WG  +  QLG G  ++   P+++ ALS+     +Q+ +
Sbjct: 339 VVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACKQLES 398

Query: 75  GRS---HSAAWTAP 85
            ++    +  W +P
Sbjct: 399 SKAVPMSAKVWVSP 412



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 2/89 (2%)

Query: 20  ISVGTEHVLAVSNTG-QVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSH 78
           +  G +H  A S+   Q+++WG     +LG GN  +   PQ + AL    I Q++ G SH
Sbjct: 81  VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSH 140

Query: 79  SAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
             A T      H+ G   +  L LG  +D
Sbjct: 141 CLAVTVAG-HVHSWGRNQNGQLGLGNTED 168



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 38/68 (55%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V ++ G  H + VS++G ++ +G +   QLG G+  ++  P  + AL +  I Q+S G 
Sbjct: 235 MVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGW 294

Query: 77  SHSAAWTA 84
            H+ A  A
Sbjct: 295 RHTMALAA 302


>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 133 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 191

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 192 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 224



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 153 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 213 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 271

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 272 NQSYPTP 278



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 173 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 232

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 233 IRVQRVACGYAHTLVLT 249



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 227 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 286

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 287 IEIAACHSTHTSA 299



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 218 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 277

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 278 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 86  HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 145

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 146 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 172



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L 
Sbjct: 120 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQ 179

Query: 66  NKNIRQVSAGR 76
           NK +  ++ G+
Sbjct: 180 NKVVVTIACGQ 190



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 66  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG--LPQDIPDHY-GHLQNKPLP 121
           SNK + +V+ G  HS   T+        G+  S  +  G  + Q IP    G LQNK + 
Sbjct: 126 SNKQVIEVACGSYHSLVLTSDG-EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 184

Query: 122 LI 123
            I
Sbjct: 185 TI 186


>gi|395529104|ref|XP_003766660.1| PREDICTED: protein RCC2-like [Sarcophilus harrisii]
          Length = 483

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 58/87 (66%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           HS ++T+ G L+++G  + G+LGHG T   + P+ +  L+K  + S +CG NHT+ + + 
Sbjct: 121 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 180

Query: 480 GKAVYAFGDGEYGKLGLGN-TGLKPTP 505
           G +V+AFG+ + G+LGLGN T   P+P
Sbjct: 181 G-SVFAFGENKMGQLGLGNQTDAIPSP 206



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 25/106 (23%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW------------KVPERVVALNK- 460
           +ACG + S ++   G LY+FG  +YG+LGH +   +             VP RV    + 
Sbjct: 219 MACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEK 278

Query: 461 -----------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
                      V V  V+CG NHT+ + D  K V+++G G YG+LG
Sbjct: 279 TKDGQILPVPNVVVRDVACGTNHTL-VLDSQKRVFSWGFGGYGRLG 323



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           + ACG  H+  +T  G ++ FG    G+LG G   +       +  N   +  ++CG   
Sbjct: 166 SAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQPITKMACGAEF 225

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           ++ +  KG  +Y+FG  EYG+LG  + G
Sbjct: 226 SMIMDCKGN-LYSFGCPEYGQLGHNSDG 252



 Score = 45.1 bits (105), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
           H L ++  G++++WG N   QLG G+      P+L+  LS + I   + GR+H+ A T
Sbjct: 121 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALT 178



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 25/38 (65%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN 54
           IV  + G  H LA++ TG VFA+G N   QLGLGNQ +
Sbjct: 164 IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 201



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +ACG  H+ V+ S   ++++G G YGRLGH    +  VP R+V L
Sbjct: 295 VACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP-RLVKL 338


>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
           [Gorilla gorilla gorilla]
          Length = 527

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 133 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 191

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 192 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 224



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 153 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 213 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 271

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 272 NQSYPTP 278



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 173 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 232

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 233 IRVQRVACGYAHTLVLT 249



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 227 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 286

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 287 IEIAACHSTHTSA 299



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 218 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 277

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 278 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 86  HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 145

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 146 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 172



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L 
Sbjct: 120 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQ 179

Query: 66  NKNIRQVSAGR 76
           NK +  ++ G+
Sbjct: 180 NKVVVTIACGQ 190



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 66  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG--LPQDIPDHY-GHLQNKPLP 121
           SNK + +V+ G  HS   T+        G+  S  +  G  + Q IP    G LQNK + 
Sbjct: 126 SNKQVIEVACGSYHSLVLTSDG-EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 184

Query: 122 LI 123
            I
Sbjct: 185 TI 186


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 14/107 (13%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V AL       V+CG+ HT
Sbjct: 404 VACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHT 463

Query: 474 VCIAD--------------KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + +                  ++ +GDG+ G+LG G+   +  PQ
Sbjct: 464 AAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQ 510



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  HS  VT +G LYT+G+G +  G LGHG+  +  +P++V   +  +HV  V+CG 
Sbjct: 349 VACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGP 408

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  +   G+ ++ FGDG +G LG G+      P+
Sbjct: 409 WHTAVVTSAGQ-LFTFGDGTFGALGHGDHSSMSIPR 443



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IACG KH+ +VT  G ++++G     RLGHG  ++   P+ + AL  +++E V+CG  H
Sbjct: 296 SIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYH 355

Query: 473 TVCIADKGKAVYAFGDGEY--GKLGLGNTGLKPTPQ 506
           +  +   G  +Y +GDG +  G LG G+      P+
Sbjct: 356 SCAVTLSGD-LYTWGDGTHNSGLLGHGSEASHWIPK 390



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 16/97 (16%)

Query: 414 IACGFKHSAVVTS---------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +ACG  H+A V                 +G L+T+G+GD GRLGHG      VP+ V AL
Sbjct: 456 VACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTAL 515

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
                  V+CG N +V +   G+ VY  G   YG+LG
Sbjct: 516 INESFCQVACGHNLSVALTTSGR-VYTMGSAVYGQLG 551



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 48/96 (50%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G++  G++   V  G+   L        +   +ACG  H AV+TS   +YT+G G  G+L
Sbjct: 543 GSAVYGQLGSPVADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQL 602

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           GHG   +   P  V  L    V++V CGLN T  I+
Sbjct: 603 GHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAIS 638



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP +    +      +ACG   S  +T++G +YT G+  YG+LG     + K+P  V   
Sbjct: 508 VPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLG-SPVADGKIPTLVEGK 566

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +    VE V+CG  H   +  K + VY +G G  G+LG G+   + TP
Sbjct: 567 IANSFVEEVACGSYHVAVLTSKTE-VYTWGKGTNGQLGHGDNDHRNTP 613



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G +H + V+  G+VF+WG    ++LG G +++   P+L+ AL   NI  V+ 
Sbjct: 292 LDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVAC 351

Query: 75  GRSHSAAWT 83
           G  HS A T
Sbjct: 352 GEYHSCAVT 360



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 39/68 (57%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N  + +++ G+ HV  +++  +V+ WG  ++ QLG G+  +   P LV  L +K ++ V 
Sbjct: 569 NSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVV 628

Query: 74  AGRSHSAA 81
            G + +AA
Sbjct: 629 CGLNFTAA 636



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 38/70 (54%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + +H+  ++ G  H   V++ GQ+F +G+ +   LG G+  +   P+ V AL  +   +
Sbjct: 396 MEGMHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMR 455

Query: 72  VSAGRSHSAA 81
           V+ G  H+AA
Sbjct: 456 VACGVWHTAA 465


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 57/85 (67%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+A +  +G +YT G  D G+LGH  +   K PE+VVAL+   + ++SCG +HT
Sbjct: 39  VGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQIIVALSCGESHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + + DKG+ V+++G G  G+LGL N
Sbjct: 97  LALNDKGQ-VFSWGLGSDGQLGLNN 120



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 51/92 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +        + +FG G  G+LG  +T  + +P
Sbjct: 307 LAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSP 338



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 2/89 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G ++++G G  G+LG        +VP  + +L+ V V  V+CG  
Sbjct: 88  ALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYW 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           H++ ++ KG  ++++G   YG+LGLG TG
Sbjct: 148 HSLALS-KGGHIFSWGQNRYGQLGLGMTG 175



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALSNKNIRQVSAG 75
           IV +S G  H LA+++ GQVF+WG  SD QLGL N +   R P+ + +LS+  + QV+ G
Sbjct: 86  IVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACG 145

Query: 76  RSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD---IPDHYGHLQNKPLPLIRA 125
             HS A +       + G      L LG+      +P H   LQ  P   I A
Sbjct: 146 YWHSLALSKGG-HIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAA 197



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IA G  HS  +T +G ++ +G   +G+LG   T +   P  + AL    V  +SCG +
Sbjct: 193 AQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGED 252

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 253 HTAALTKEG-GVFTFGAGGYGQLGHNSTNHEVNPR 286



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGL 470
           A +ACG+ HS  ++  G+++++G   YG+LG G T  +  VP+ + +L  +    ++ G 
Sbjct: 140 AQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGG 199

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            H+  +   G AV+ +G  ++G+LGL +T  +  P
Sbjct: 200 AHSFALTLSG-AVFGWGRNKFGQLGLNDTNDRCFP 233



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +H+ + + I    I+ G  H  A++ +G VF WG N   QLGL +  +   P L+ AL +
Sbjct: 182 QHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRS 241

Query: 67  KNIRQVSAGRSHSAAWT 83
           + +  +S G  H+AA T
Sbjct: 242 QRVIYISCGEDHTAALT 258



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLALS 65
           R+I +  ++ +  ++ G  H LA+S  G +F+WG N   QLGLG    +   PQ + +L 
Sbjct: 129 RNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQ 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q++AG +HS A T
Sbjct: 189 GIPFAQIAAGGAHSFALT 206



 Score = 45.1 bits (105), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIPAF----KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++ T+ R  PA     ++  ++ IS G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q++ GR H+ A+T
Sbjct: 284 NPRKVFELMGNVVTQIACGRQHTLAFT 310


>gi|145536544|ref|XP_001453994.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124421738|emb|CAK86597.1| unnamed protein product [Paramecium tetraurelia]
          Length = 229

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG  H+A++T NG++YT G  ++ +LGH    +   P+R+  LNK  V  VSCG  HT
Sbjct: 46  VSCGKDHTALLTQNGHVYTMGCNEHNKLGHANKQSLYAPQRIEQLNK--VIQVSCGSTHT 103

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTG 500
            C+   G +++ +GD   G+LG+   G
Sbjct: 104 ACVTSDG-SLFTWGDNSCGQLGVKQNG 129



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 4/79 (5%)

Query: 8   HIPAFKNIHI--VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           HIP   +  I  + +S G +H   ++  G V+  G N   +LG  N+ +   PQ +  L 
Sbjct: 32  HIPKICHYKIGFIQVSCGKDHTALLTQNGHVYTMGCNEHNKLGHANKQSLYAPQRIEQL- 90

Query: 66  NKNIRQVSAGRSHSAAWTA 84
           NK I QVS G +H+A  T+
Sbjct: 91  NKVI-QVSCGSTHTACVTS 108



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           ++ +S G+ H   V++ G +F WG+NS  QLG+    N      +      N  QVS G 
Sbjct: 93  VIQVSCGSTHTACVTSDGSLFTWGDNSCGQLGVKQNGNLNRVSTL-----TNCIQVSCGN 147

Query: 77  SHSAAWT 83
            H+   T
Sbjct: 148 KHTLVLT 154


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           ++CG  H+  VT +G LYT+G+G Y  G LGHG  ++  +P+++   L  +HV S++CG 
Sbjct: 365 VSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGP 424

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  +   G+ ++ FGDG +G LG G+ G    P+
Sbjct: 425 WHTAVVTSAGQ-LFTFGDGTFGVLGHGDRGSVTMPR 459



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++T+G    GRLGHG   +   P+ V AL   ++E VSCG  HT
Sbjct: 313 IACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGEYHT 372

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             +   G  +Y +GDG Y  G LG GN
Sbjct: 373 CAVTLSGD-LYTWGDGTYNFGLLGHGN 398



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+AVVTS G L+TFG+G +G LGHG   +  +P  V +L  +     +CG+ 
Sbjct: 418 SSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVW 477

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   K  P
Sbjct: 478 HTAAVVEVMVGSSSSSNCSSGK-LFTWGDGDKGRLGHGDKETKLVP 522



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)

Query: 399 VPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           VP+    +L + +   IACG  H AV+TS   +YT+G G  GRLGHG T +   P  V A
Sbjct: 572 VPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEA 631

Query: 458 LNKVHVESVSCGLNHTVCIA 477
           L    V+S++CG N T  I 
Sbjct: 632 LKDKQVKSIACGTNFTAAIC 651



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  +      ++CG   +  +T++G++YT G+  YG+LG+    + KVP RV   
Sbjct: 521 VPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGN-PHADGKVPVRVEGK 579

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE ++CG  H   +  + + VY +G G  G+LG G+T  + +P
Sbjct: 580 LSKSFVEEIACGAYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRNSP 626



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD GRLGHG      VP  V AL   +
Sbjct: 473 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPN 532

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              VSCG + TV +   G  VY  G   YG+LG
Sbjct: 533 FCRVSCGHSMTVALTTSGH-VYTMGSPVYGQLG 564



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +I+ G  H   V+  G++F WG  S  +LG G   +  +P+LV AL N NI  VS 
Sbjct: 308 LDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSC 367

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 368 GEYHTCAVT 376



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K ++ ++ G 
Sbjct: 585 VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGT 644

Query: 77  SHSAA 81
           + +AA
Sbjct: 645 NFTAA 649



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 12/89 (13%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  V  + G  H  AV             ++G++F WG+    +LG G++  
Sbjct: 459 REVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKET 518

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWT 83
              P  V AL + N  +VS G S + A T
Sbjct: 519 KLVPTCVAALVDPNFCRVSCGHSMTVALT 547


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V+S+G +YT+G   YG+LGHG   +  VP ++ AL    +  +S G  HT
Sbjct: 243 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHT 302

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +A  GK +Y +G  ++G++G+G+     +P
Sbjct: 303 MALAADGK-LYGWGWNKFGQVGVGDNEDHCSP 333



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 5/98 (5%)

Query: 405 NRLQYYEAA----IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
            ++Q +E      IA G +H+A VT +G LY +G G YG LG G   +  +PE+V ++N 
Sbjct: 178 QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNG 237

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             +  V+CG  HT+ ++  G ++Y +G  +YG+LG G+
Sbjct: 238 QKMVLVACGWRHTITVSSSG-SIYTYGWSKYGQLGHGD 274



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   VT  G+++++G    G+LG G T +  +P+++ A   V V+ ++ G  HT
Sbjct: 139 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHT 198

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + + G  +Y +G G YG LGLG+   +  P+
Sbjct: 199 AAVTEDGD-LYGWGWGRYGNLGLGDRDDRLIPE 230



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 412 AAIACGFKHSAVVTSNG-YLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           + + CG  H+   +     LY++G GD+GRLGHG + +   P+ + AL  V +  ++CG 
Sbjct: 84  SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGD 143

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +H + +   G  V+++G  + G+LGLGNT     PQ
Sbjct: 144 SHCLAVTVAGH-VHSWGRNQNGQLGLGNTEDSLLPQ 178



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A + + I  I+ G  H LAV+  G V +WG N + QLGLGN  +   PQ + A     
Sbjct: 128 IQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR 187

Query: 69  IRQVSAGRSHSAA 81
           ++ ++AG  H+AA
Sbjct: 188 VKMIAAGAEHTAA 200



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS----CG 469
           I+ G  HS  + S G + ++G G+ G+LGHG   +  VP  + A        V+    CG
Sbjct: 30  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 89

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +HT   +D+   +Y++G G++G+LG GN+     PQ
Sbjct: 90  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQ 126



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G++H+  + ++G LY +G   +G++G G   +   P +V   N+  V  V+CG  HT
Sbjct: 295 ISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHT 354

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + + +  K V+++G G  G+LG G 
Sbjct: 355 LALTEA-KNVFSWGRGTSGQLGHGE 378



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I AF+ + +  I+ G EH  AV+  G ++ WG      LGLG++ +   P+ V +++ 
Sbjct: 178 QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNG 237

Query: 67  KNIRQVSAGRSHS 79
           + +  V+ G  H+
Sbjct: 238 QKMVLVACGWRHT 250



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 41/75 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K+  I  IS G  H +A++  G+++ WG N   Q+G+G+  ++  P  V   + + 
Sbjct: 284 LEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQK 343

Query: 69  IRQVSAGRSHSAAWT 83
           + QV+ G  H+ A T
Sbjct: 344 VVQVACGWRHTLALT 358



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           V + F N  +  +  +ACG++H+  +T    ++++G G  G+LGHG  ++  +P+ + AL
Sbjct: 334 VQVNFPNEQKVVQ--VACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDAL 391

Query: 459 N 459
           +
Sbjct: 392 S 392



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN--IRQVSA 74
           +V ++ G  H LA++    VF+WG  +  QLG G  ++   P+++ ALS+     +Q+ +
Sbjct: 344 VVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACKQLES 403

Query: 75  GRS---HSAAWTAP 85
            ++    +  W +P
Sbjct: 404 SKAVPMSAKVWVSP 417



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 38/68 (55%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V ++ G  H + VS++G ++ +G +   QLG G+  ++  P  + AL +  I Q+S G 
Sbjct: 240 MVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGW 299

Query: 77  SHSAAWTA 84
            H+ A  A
Sbjct: 300 RHTMALAA 307



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 2/89 (2%)

Query: 20  ISVGTEHVLAVSNTG-QVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSH 78
           +  G +H  A S+   Q+++WG     +LG GN  +   PQ + AL    I Q++ G SH
Sbjct: 86  VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSH 145

Query: 79  SAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
             A T      H+ G   +  L LG  +D
Sbjct: 146 CLAVTVAG-HVHSWGRNQNGQLGLGNTED 173


>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
           guttata]
          Length = 537

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 63/121 (52%), Gaps = 2/121 (1%)

Query: 386 TGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
            G++    T  Q  P   +N LQ      IACG   S  V +NG +Y +G    G+LG G
Sbjct: 163 CGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLG 222

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
              N   P RV AL+ V V  ++CG  HT+ + D+G  +YA+G   YG+LG GN   + +
Sbjct: 223 NNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEG-LLYAWGANTYGQLGTGNKSNQLS 281

Query: 505 P 505
           P
Sbjct: 282 P 282



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG  HS  ++ +G LY +G  + G++G G+T N   P RV   L    V  ++CG   
Sbjct: 139 VACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTS 198

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ + + G+ VY +G    G+LGLGN G + TP
Sbjct: 199 SMAVVNNGE-VYGWGYNGNGQLGLGNNGNQLTP 230



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 40/71 (56%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V I+ G    +AV N G+V+ WG N + QLGLGN  N   P  V AL +  + Q++ G 
Sbjct: 189 VVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIACGY 248

Query: 77  SHSAAWTAPPL 87
           +H+ A T   L
Sbjct: 249 AHTLALTDEGL 259



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 4/89 (4%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLNHTVCIA 477
           H  + T +G +Y +G+  Y +LG+GTT     P +V    L K  VE V+CG +H++ ++
Sbjct: 92  HVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVE-VACGSHHSMALS 150

Query: 478 DKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             G  +YA+G    G++G G+T  +PTP+
Sbjct: 151 MDGD-LYAWGYNNCGQVGSGSTANQPTPR 178



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A  ++ ++ I+ G  H LA+++ G ++AWG N+  QLG GN+ N   P  ++    + 
Sbjct: 233 VAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQIMMEKERV 292

Query: 69  IRQVSAGRSHSAA 81
           +   +   +H++A
Sbjct: 293 VEIAACHSAHTSA 305



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 41/93 (44%)

Query: 395 GGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           G Q  P   A         IACG+ H+  +T  G LY +G   YG+LG G   N   P +
Sbjct: 225 GNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQ 284

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           ++   +  VE  +C   HT     +   VY +G
Sbjct: 285 IMMEKERVVEIAACHSAHTSAAKTQSGQVYMWG 317



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIRQVSAG 75
           +V+++ G+ H +A+S  G ++AWG N+  Q+G G+  N   P+ V   L  K +  ++ G
Sbjct: 136 VVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACG 195

Query: 76  RSHSAA 81
           ++ S A
Sbjct: 196 QTSSMA 201


>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
 gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 133 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 191

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 192 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 224



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 153 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 212

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 213 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 271

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 272 NQSYPTP 278



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 173 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 232

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 233 IRVQRVACGYAHTLVLT 249



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 227 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 286

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 287 IEIAACHSTHTSA 299



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 218 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 277

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 278 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 86  HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 145

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 146 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 172



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L 
Sbjct: 120 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQ 179

Query: 66  NKNIRQVSAGR 76
           NK +  ++ G+
Sbjct: 180 NKVVVTIACGQ 190



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 66  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG--LPQDIPDHY-GHLQNKPLP 121
           SNK + +V+ G  HS   T+        G+  S  +  G  + Q IP    G LQNK + 
Sbjct: 126 SNKQVIEVACGSYHSLVLTSDG-EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 184

Query: 122 LI 123
            I
Sbjct: 185 TI 186


>gi|307110133|gb|EFN58370.1| hypothetical protein CHLNCDRAFT_20698, partial [Chlorella
           variabilis]
          Length = 379

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG  H+  + + G  +T+G  D+G LG+GTT     PE+VV L  V +  VS G  H+
Sbjct: 185 VSCGAFHNLALNAAGECFTWGINDFGMLGNGTTSYATCPEKVVGLEGVFIADVSAGGWHS 244

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + I+ +G+ VY +G GEYG+LGLG+
Sbjct: 245 MAISAEGE-VYVWGRGEYGRLGLGD 268



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVS 467
           + A ++ G  HS  +++ G +Y +G G+YGRLG G  T  +   P++V  L    V   S
Sbjct: 233 FIADVSAGGWHSMAISAEGEVYVWGRGEYGRLGLGDRTGSSKLRPQKVKTLEGHRVVEGS 292

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKL 494
           CG  HT+ + D+G+  + +G G +G+ 
Sbjct: 293 CGGTHTMVVTDEGR-CFIWGRGAFGRC 318



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE--PQLVLALSN 66
           +   + + I D+S G  H +A+S  G+V+ WG     +LGLG++    +  PQ V  L  
Sbjct: 226 VVGLEGVFIADVSAGGWHSMAISAEGEVYVWGRGEYGRLGLGDRTGSSKLRPQKVKTLEG 285

Query: 67  KNIRQVSAGRSHS 79
             + + S G +H+
Sbjct: 286 HRVVEGSCGGTHT 298



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + +   + +HI   ++G  HVLA+ +TGQ +AWG N   Q    ++ +   P  V  L  
Sbjct: 76  QRVAGLQGVHIKQAAIGGWHVLALDDTGQCWAWGGNEYGQCLPRDKRDILAP--VKCLEG 133

Query: 67  KNIRQVSAGRSHSAAWT 83
             ++QV+AG  HS A T
Sbjct: 134 IAVKQVAAGGMHSLALT 150



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 32/65 (49%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            VD+S G  H LA++  G+ F WG N    LG G       P+ V+ L    I  VSAG 
Sbjct: 182 FVDVSCGAFHNLALNAAGECFTWGINDFGMLGNGTTSYATCPEKVVGLEGVFIADVSAGG 241

Query: 77  SHSAA 81
            HS A
Sbjct: 242 WHSMA 246



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIAD 478
           +++  + ++G + T+G    G LGHG       P+RV  L  VH++  + G  H + + D
Sbjct: 42  RNTLAIGADGNVITWGWNARGTLGHGHREPQGKPQRVAGLQGVHIKQAAIGGWHVLALDD 101

Query: 479 KGKAVYAFGDGEYGKL 494
            G+  +A+G  EYG+ 
Sbjct: 102 TGQ-CWAWGGNEYGQC 116


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 1/82 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG+ HS VV++ G  ++FG  DYG+LG G+ ++  VP  V   +   +   +CG  HT
Sbjct: 577 VACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHT 636

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           V ++++G+ VY FG    G+LG
Sbjct: 637 VLLSEQGQ-VYVFGRNNKGQLG 657



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 2/105 (1%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           T  QS P    +      + +ACG  H+ + T+ G L+T G  DYG+LG       K+P 
Sbjct: 506 TQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQIKLPT 565

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +VAL    V  V+CG  H+V ++  G+A ++FG  +YG+LG+G+
Sbjct: 566 -LVALPNEMVSFVACGYYHSVVVSTGGRA-FSFGRNDYGQLGIGS 608



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)

Query: 418 FKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           + HSAV+T  G LYTFG  D G+LG   T +   P+ V +L    V  V+CGL HT+   
Sbjct: 478 YHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICT 537

Query: 478 DKGKAVYAFGDGEYGKLGLGN 498
             G+ ++  G  +YG+LGL +
Sbjct: 538 AAGE-LFTCGKNDYGQLGLAH 557



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 4/104 (3%)

Query: 404 ANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVH 462
           + R+++  A+  C  +H   +T  G  Y++G  D G+LGH        VP+ + +L    
Sbjct: 413 SQRVKFIAASNGC--EHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDKK 470

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +   S   +H+  I D G+ +Y FG  + G+LGL +T  + TPQ
Sbjct: 471 LGFASVSYHHSAVITDAGE-LYTFGMNDCGQLGLDHTQHQSTPQ 513



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 13  KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN-QINYREPQLVLALSNKNIRQ 71
           + +  +  S G EH++A+++TG  ++WG N   QLG  N       P+L+ +L +K +  
Sbjct: 414 QRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDKKLGF 473

Query: 72  VSAGRSHSAAWT 83
            S    HSA  T
Sbjct: 474 ASVSYHHSAVIT 485



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 37/69 (53%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
           A  N  +  ++ G  H + VS  G+ F++G N   QLG+G++++   P +V   SN  + 
Sbjct: 568 ALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMV 627

Query: 71  QVSAGRSHS 79
           + + G  H+
Sbjct: 628 RATCGCYHT 636



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 38/76 (50%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I + K+  +   SV   H   +++ G+++ +G N   QLGL +  +   PQLV +L    
Sbjct: 463 IESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATE 522

Query: 69  IRQVSAGRSHSAAWTA 84
           +  V+ G  H+   TA
Sbjct: 523 VSMVACGLYHTIICTA 538


>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Nomascus leucogenys]
          Length = 704

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NH 
Sbjct: 40  LSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH- 98

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 99  ILVSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG  + +  N + P+ V  + +  V  V+ G  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPSQLLGNHRTPQLVSEIPE-KVIQVARGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +A G +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 248 VARGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FG+  +GKLGLG
Sbjct: 307 TALIRDIG-LMYTFGNSRHGKLGLG 330



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 39/67 (58%)

Query: 12 FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
          FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32 FKNDVPVHLSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKL 91

Query: 72 VSAGRSH 78
           + GR+H
Sbjct: 92 AACGRNH 98



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++   G +YTFGN  +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 300 ISCGENHTALIRDIGLMYTFGNSRHGKLGLGLENFTNHFIPTLCSDFLRFIVKLVACGGC 359

Query: 472 HTVCIA 477
           H V  A
Sbjct: 360 HMVVFA 365



 Score = 42.4 bits (98), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    AV+  G++F WG NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAAVTEDGRLFMWGKNSEGQIGLKNVPNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWTA 84
            +  +S G  HSA  T 
Sbjct: 191 PVSWISCGYYHSAFVTT 207



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL--SN 66
           + A K   +   + G  H+L  +  G V+A G N++ QLGLG+    R    V++   S 
Sbjct: 81  VKALKPEKVKLAACGRNHILVSTEGGNVYATGGNNEGQLGLGD-TEERNTFHVISFFTSE 139

Query: 67  KNIRQVSAGRSHSAAWT 83
             I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAAVT 156


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V+ +G LYT+G   YG+LGHG   +  VP ++ AL    +  +S G  HT
Sbjct: 228 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHT 287

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +  +GK +Y +G  ++G++G+GN     +P
Sbjct: 288 MALTSEGK-LYGWGWNKFGQVGVGNNDDHCSP 318



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 5/97 (5%)

Query: 406 RLQYYEAA----IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           ++Q +E      IA G +H+A VT +G LY +G G YG LG G   +  +PE+V ++   
Sbjct: 164 KIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGE 223

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            +  V+CG  HT+ ++D G  +Y +G  +YG+LG G+
Sbjct: 224 KMVLVACGWRHTITVSDSGN-LYTYGWSKYGQLGHGD 259



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   VT  G + ++G    G+LG GTT +  +P+++ A   V V+ ++ G  HT
Sbjct: 124 IACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHT 183

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + + G  +Y +G G YG LGLG+   +  P+
Sbjct: 184 AAVTEDGD-LYGWGWGRYGNLGLGDRNDRLLPE 215



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 52/93 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G  HS  + +   L ++G G+ G+LGHG   +  VP  +   +   + SV CG +HT
Sbjct: 19  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHT 78

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              ++    VY++G G++G+LG GN+    TPQ
Sbjct: 79  TAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQ 111



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 2/95 (2%)

Query: 413 AIACGFKHSAVVTSNG-YLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++ CG  H+   + +   +Y++G GD+GRLGHG + +   P+ V AL  + ++ ++CG +
Sbjct: 70  SVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDS 129

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           H + +   G+ V ++G  + G+LGLG T     PQ
Sbjct: 130 HCLAVTMAGQ-VQSWGRNQNGQLGLGTTEDSLLPQ 163



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + + I  I+ G  H LAV+  GQV +WG N + QLGLG   +   PQ + A     
Sbjct: 113 VKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVC 172

Query: 69  IRQVSAGRSHSAA 81
           ++ ++AG  H+AA
Sbjct: 173 VKMIAAGAEHTAA 185



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G++H+  +TS G LY +G   +G++G G   +   P +V       +  V+CG  HT
Sbjct: 280 ISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHT 339

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +++K K V+++G G  G+LG G    + TP
Sbjct: 340 LALSEK-KNVFSWGRGTSGQLGNGEIVDRNTP 370



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K+  I  IS G  H +A+++ G+++ WG N   Q+G+GN  ++  P  V    ++ 
Sbjct: 269 LEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQK 328

Query: 69  IRQVSAGRSHSAA 81
           I QV+ G  H+ A
Sbjct: 329 ISQVACGWRHTLA 341



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I AF+ + +  I+ G EH  AV+  G ++ WG      LGLG++ +   P+ V ++  
Sbjct: 163 QKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEG 222

Query: 67  KNIRQVSAGRSHS 79
           + +  V+ G  H+
Sbjct: 223 EKMVLVACGWRHT 235



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 2/100 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTG-QVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           +  F    I  +  G +H  A S    QV++WG     +LG GN  +   PQ V AL   
Sbjct: 60  LSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL 119

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
            I+Q++ G SH  A T       + G   +  L LG  +D
Sbjct: 120 KIKQIACGDSHCLAVTMAG-QVQSWGRNQNGQLGLGTTED 158



 Score = 41.6 bits (96), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN- 66
           H P  ++  I  ++ G  H LA+S    VF+WG  +  QLG G  ++   P L+ ALS  
Sbjct: 322 HFP--EDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSTD 379

Query: 67  ----KNIRQVSAGRSHSAAWTAP 85
               K +   +A    +  W +P
Sbjct: 380 GSGCKKLESSTAAPFAAKVWVSP 402



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 42/76 (55%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + +   +V ++ G  H + VS++G ++ +G +   QLG G+  ++  P  + AL +  
Sbjct: 217 VSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDST 276

Query: 69  IRQVSAGRSHSAAWTA 84
           I Q+S G  H+ A T+
Sbjct: 277 ISQISGGWRHTMALTS 292


>gi|167516086|ref|XP_001742384.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779008|gb|EDQ92622.1| predicted protein [Monosiga brevicollis MX1]
          Length = 355

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 17/200 (8%)

Query: 221 QVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVA 280
           +V K  G D   P     +K  GE      G F + +  M  +L    + LL++ P G  
Sbjct: 2   RVKKAAGGD---PIYPLLIKFTGERVAGNSGSFREFMQRMANDLHGAQLSLLIKAPAGA- 57

Query: 281 DTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVT 340
             G N+ ++I+NP   +       ++FLG LF +AIR+  PLPL + P  WK +   P++
Sbjct: 58  -YGRNKGKWIINPARFD-FAVYKQYEFLGTLFALAIRSDVPLPLDILPSFWKCLAGCPLS 115

Query: 341 FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWT----GRITPIVTGG 396
            +DL D D L    L+ ++ +      E  F E +       +  T     R  P   G 
Sbjct: 116 SSDLADCDFLLDTRLQELKRLG----DEDEFDEYVLQHGLTYSMHTLLGEERAVPRPAGA 171

Query: 397 QSVP---LTFANRLQYYEAA 413
              P   L FA+R  Y +AA
Sbjct: 172 SDGPHALLRFADRHAYIKAA 191


>gi|225466229|ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 10/102 (9%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H A+V+++G L+T+G+G +G LGHG   +   P+ V +L+ + V++ +CG  HT
Sbjct: 419 VACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHT 478

Query: 474 VCIAD----------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             I +          KG  ++ +GDG+ G+LG G+   K  P
Sbjct: 479 AAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLP 520



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G KH+A+VT +G ++ +G G  GRLGH   M+   P+ V +L  V V+SVSCG   T
Sbjct: 312 ISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQT 371

Query: 474 VCIADKGKAVYAFGDGEYG 492
             +   G+ +Y +GD   G
Sbjct: 372 CALTHSGE-LYTWGDNGSG 389



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 5/152 (3%)

Query: 350 LYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQY 409
           L + ++  +R+I L G   A   +   + C+ G    GR+   V      P    +    
Sbjct: 301 LESTTMLDVREISLGGKHAALVTKHGEVFCW-GEGSGGRLGHKVNMDMGNPKIVESLTGV 359

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYG--RLGHGTTMNWKVPERVVA-LNKVHVESV 466
              +++CG   +  +T +G LYT+G+   G   +G     +  +P R+   LN   + +V
Sbjct: 360 LVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNV 419

Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           +CG  H   ++  G+ ++ +GDG +G LG G 
Sbjct: 420 ACGEWHMAIVSTSGQ-LFTYGDGTFGVLGHGK 450



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS+G +H   V+  G+VF WG  S  +LG    ++   P++V +L+   ++ VS 
Sbjct: 307 LDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSC 366

Query: 75  GRSHSAAWT 83
           G   + A T
Sbjct: 367 GEYQTCALT 375



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 19/104 (18%)

Query: 413 AIACGFKHSAVV-----------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A ACG  H+A +           T  G L+T+G+GD GRLGHG      +P  V  L   
Sbjct: 470 AAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDH 529

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               VSCG   TV +   G  VY  G        LG+T  + +P
Sbjct: 530 DFVQVSCGRMLTVGLTCLG-TVYTMGR-------LGDTEDRNSP 565


>gi|118348324|ref|XP_001007637.1| myosin like protein [Tetrahymena thermophila]
 gi|89289404|gb|EAR87392.1| myosin like protein [Tetrahymena thermophila SB210]
          Length = 1941

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 3/97 (3%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV--HVESVSCG 469
            + I+CG   +  ++  G L++ G    G LGHG  +  K P+ + +  K    ++ VSCG
Sbjct: 1706 SQISCGGHFTMFLSIQGTLFSSGQNTSGELGHGDRLFRKSPQLISSFKKFGEKIKQVSCG 1765

Query: 470  LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            L HT+C+   GK ++++G+  +G+LG+G+T  +  PQ
Sbjct: 1766 LKHTICLTALGK-IFSWGNNRFGQLGVGDTKYRSNPQ 1801



 Score = 46.2 bits (108), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 7/82 (8%)

Query: 9    IPAFKNI--HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            I +FK     I  +S G +H + ++  G++F+WGNN   QLG+G+      PQL+   S 
Sbjct: 1749 ISSFKKFGEKIKQVSCGLKHTICLTALGKIFSWGNNRFGQLGVGDTKYRSNPQLIFVKSK 1808

Query: 67   -----KNIRQVSAGRSHSAAWT 83
                  +  QV AG   S   T
Sbjct: 1809 SIDSINSFLQVRAGLRSSIVLT 1830



 Score = 44.7 bits (104), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN--KNIRQV 72
            + I  IS G    + +S  G +F+ G N+  +LG G+++  + PQL+ +     + I+QV
Sbjct: 1703 VQISQISCGGHFTMFLSIQGTLFSSGQNTSGELGHGDRLFRKSPQLISSFKKFGEKIKQV 1762

Query: 73   SAGRSHSAAWTA 84
            S G  H+   TA
Sbjct: 1763 SCGLKHTICLTA 1774


>gi|283132466|dbj|BAI63635.1| myosin11 [Tetrahymena thermophila]
          Length = 1962

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 3/97 (3%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV--HVESVSCG 469
            + I+CG   +  ++  G L++ G    G LGHG  +  K P+ + +  K    ++ VSCG
Sbjct: 1727 SQISCGGHFTMFLSIQGTLFSSGQNTSGELGHGDRLFRKSPQLISSFKKFGEKIKQVSCG 1786

Query: 470  LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            L HT+C+   GK ++++G+  +G+LG+G+T  +  PQ
Sbjct: 1787 LKHTICLTALGK-IFSWGNNRFGQLGVGDTKYRSNPQ 1822



 Score = 46.2 bits (108), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 7/82 (8%)

Query: 9    IPAFKNI--HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            I +FK     I  +S G +H + ++  G++F+WGNN   QLG+G+      PQL+   S 
Sbjct: 1770 ISSFKKFGEKIKQVSCGLKHTICLTALGKIFSWGNNRFGQLGVGDTKYRSNPQLIFVKSK 1829

Query: 67   -----KNIRQVSAGRSHSAAWT 83
                  +  QV AG   S   T
Sbjct: 1830 SIDSINSFLQVRAGLRSSIVLT 1851



 Score = 44.7 bits (104), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 15   IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN--KNIRQV 72
            + I  IS G    + +S  G +F+ G N+  +LG G+++  + PQL+ +     + I+QV
Sbjct: 1724 VQISQISCGGHFTMFLSIQGTLFSSGQNTSGELGHGDRLFRKSPQLISSFKKFGEKIKQV 1783

Query: 73   SAGRSHSAAWTA 84
            S G  H+   TA
Sbjct: 1784 SCGLKHTICLTA 1795


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 15/120 (12%)

Query: 399 VPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P   +  L+ ++ A ++CG  H+A+VTS G L+TFG+G +G LGHG   ++  P  V +
Sbjct: 173 IPKRISGALEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVES 232

Query: 458 LNKVHVESVSCGLNHTVCIAD-----------KGKAVYAFGDGEYGKLGLGNTG--LKPT 504
           L+ +   +V+CG+ HT  + +            GK ++ +GDG+  +LG G+    LKPT
Sbjct: 233 LSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGK-LFTWGDGDKHRLGHGDKEPRLKPT 291



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  VT+ G LYT+G+G +  G LG+GT ++  +P+R+  AL    V  VSCG 
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGT 193

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +  +G+ ++ FGDG +G LG GN
Sbjct: 194 WHTALVTSRGQ-LFTFGDGTFGVLGHGN 220



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG KH+A+VT NG ++T+G    GRLGHG+  +   P  V +L   +V+ V+CG  HT
Sbjct: 82  VDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHT 141

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y +GDG +    LGN
Sbjct: 142 CAVTTAGE-LYTWGDGTHNIGLLGN 165



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 42/79 (53%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P    + +  +   +ACG  H AV+T+   ++T+G G  GRLGHG   + K+P  V AL
Sbjct: 340 LPCLVEDIMGEHVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEAL 399

Query: 459 NKVHVESVSCGLNHTVCIA 477
               V  ++CG N T  I 
Sbjct: 400 RDRGVRHIACGSNFTSAIC 418



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 42/66 (63%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H+V ++ G+ HV  ++N  +VF WG  ++ +LG G+  + + P LV AL ++ +R ++ G
Sbjct: 351 HVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGVRHIACG 410

Query: 76  RSHSAA 81
            + ++A
Sbjct: 411 SNFTSA 416



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 2/106 (1%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           P   A+ + Y    IACG   +  +T++G + + GN  YG+LG+  + + K+P  V  + 
Sbjct: 290 PTCVASLIDYDFCRIACGHSLTVGLTTSGQILSMGNTVYGQLGNPRS-DGKLPCLVEDIM 348

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             HV  V+CG  H   + +K + V+ +G G  G+LG G+   +  P
Sbjct: 349 GEHVVQVACGSYHVAVLTNKSE-VFTWGKGANGRLGHGDIEDRKIP 393



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  +  G +H   V+  G+VF WG  S  +LG G++ +   P+LV +L+  N+  V+ 
Sbjct: 77  LDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVAC 136

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 137 GEFHTCAVT 145



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVVTS-----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A+ACG  H+A V             +G L+T+G+GD  RLGHG       P  V +L   
Sbjct: 240 AVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               ++CG + TV +   G+ + + G+  YG+LG
Sbjct: 300 DFCRIACGHSLTVGLTTSGQ-ILSMGNTVYGQLG 332



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 39/71 (54%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
           A +   +  +S GT H   V++ GQ+F +G+ +   LG GN+ ++  P+ V +LS     
Sbjct: 180 ALEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTI 239

Query: 71  QVSAGRSHSAA 81
            V+ G  H+AA
Sbjct: 240 AVACGVWHTAA 250


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 15/120 (12%)

Query: 399 VPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P   +  L+ ++ A ++CG  H+A+VTS G L+TFG+G +G LGHG   ++  P  V +
Sbjct: 173 IPKRISGVLEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVES 232

Query: 458 LNKVHVESVSCGLNHTVCIAD-----------KGKAVYAFGDGEYGKLGLGNT--GLKPT 504
           L+ +   +V+CG+ HT  + +            GK ++ +GDG+  +LG G+    LKPT
Sbjct: 233 LSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGK-LFTWGDGDKHRLGHGDKEPKLKPT 291



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVALNKVH-VESVSCGL 470
           +ACG  H+  VT++G LYT+G+G +  G LG+GT ++  +P+R+  + + H V  VSCG 
Sbjct: 134 VACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGT 193

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +  +G+ ++ FGDG +G LG GN
Sbjct: 194 WHTALVTSRGQ-LFTFGDGTFGVLGHGN 220



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG KH+A+VT NG ++T+G    GRLGHG+  +   P  V +L   +V+ V+CG  HT
Sbjct: 82  VDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHT 141

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +   G+ +Y +GDG +    LGN
Sbjct: 142 CAVTTSGE-LYTWGDGTHNIGLLGN 165



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P    + +  +   +ACG  H AV+T+   ++T+G G  GRLGHG   + K+P  V +L
Sbjct: 340 LPCLIEDIMGEHVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESL 399

Query: 459 NKVHVESVSCGLNHTVCIA 477
               V  ++CG N T  I 
Sbjct: 400 RDRAVRHIACGSNFTSAIC 418



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 2/106 (1%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           P   A+ + Y    IACG   +  +T++G + + GN  YG+LG+  + + K+P  +  + 
Sbjct: 290 PTCVASLIDYDFCRIACGHSLTVGLTTSGQVLSMGNTVYGQLGNPRS-DGKLPCLIEDIM 348

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             HV  V+CG  H   + +K + V+ +G G  G+LG G+   +  P
Sbjct: 349 GEHVVQVACGSYHVAVLTNKSE-VFTWGKGANGRLGHGDVEDRKIP 393



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 42/66 (63%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H+V ++ G+ HV  ++N  +VF WG  ++ +LG G+  + + P LV +L ++ +R ++ G
Sbjct: 351 HVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACG 410

Query: 76  RSHSAA 81
            + ++A
Sbjct: 411 SNFTSA 416



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVVTS-----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A+ACG  H+A V             +G L+T+G+GD  RLGHG       P  V +L   
Sbjct: 240 AVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDY 299

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               ++CG + TV +   G+ V + G+  YG+LG
Sbjct: 300 DFCRIACGHSLTVGLTTSGQ-VLSMGNTVYGQLG 332



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  +  G +H   V+  G+VF WG  S  +LG G++ +   P+LV +L+  N+  V+ 
Sbjct: 77  LDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVAC 136

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 137 GEFHTCAVT 145



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 36/62 (58%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           +S GT H   V++ GQ+F +G+ +   LG GN+ ++  P+ V +LS      V+ G  H+
Sbjct: 189 VSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGVWHT 248

Query: 80  AA 81
           AA
Sbjct: 249 AA 250


>gi|410057994|ref|XP_001167896.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Pan troglodytes]
          Length = 343

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 8/108 (7%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 45  VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 104

Query: 69  IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQDI 108
           I +V+ G SHS AWT   +     H P        P  +  LG+P D+
Sbjct: 105 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSDV 152



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 434 GNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGK 493
           G GDY RLGH + ++ + P+ V  L    +  V+ G  H + + D G+ VYA+GD ++G+
Sbjct: 24  GKGDYFRLGHRSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQ-VYAWGDNDHGQ 82

Query: 494 LGLGNTGL--KPT 504
            G G T +  KPT
Sbjct: 83  QGNGTTTVNRKPT 95



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 56  VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 115

Query: 474 V 474
           V
Sbjct: 116 V 116


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  VT+ G LYT+G+G Y  G LGHG  +   +P+R+  AL  + V  VSCG 
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGT 193

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   G+ ++ FGDG +G LG G+
Sbjct: 194 WHTALITSMGQ-LFTFGDGSFGVLGHGD 220



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 15/124 (12%)

Query: 396 GQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           G  +P   +  L+  + A ++CG  H+A++TS G L+TFG+G +G LGHG   +   P  
Sbjct: 170 GHWIPKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPRE 229

Query: 455 VVALNKVHVESVSCGLNHTVCIAD------------KGKAVYAFGDGEYGKLGLGN--TG 500
           V +L+ +   +V+CG+ HT  I +                ++ +GDG+  +LG G+  T 
Sbjct: 230 VESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETR 289

Query: 501 LKPT 504
           LKPT
Sbjct: 290 LKPT 293



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG KH+A+V  NG ++T+G    GRLGHGT  +   P  V +L   +V+ V+CG  HT
Sbjct: 82  VDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHT 141

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             +   G+ +Y +GDG Y  G LG GN
Sbjct: 142 CAVTTTGE-LYTWGDGTYNVGLLGHGN 167



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 38/64 (59%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+T+   ++T+G G  GRLGHG T + KVP  V AL    V  ++CG N T
Sbjct: 358 IACGSYHVAVLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGANFT 417

Query: 474 VCIA 477
             I 
Sbjct: 418 AAIC 421



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 41/66 (62%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
            ++ I+ G+ HV  ++N  +VF WG  ++ +LG G+  + + P LV AL ++ +R ++ G
Sbjct: 354 QVLQIACGSYHVAVLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACG 413

Query: 76  RSHSAA 81
            + +AA
Sbjct: 414 ANFTAA 419



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 14/96 (14%)

Query: 413 AIACGFKHSAVVT-------------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           A+ACG  H+A +              S G L+T+G+GD  RLGHG       P  V  L 
Sbjct: 240 AVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLI 299

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
                 V+CG + TV +   G+ V + G+  YG+LG
Sbjct: 300 DHDFYRVACGHSLTVALTTSGQ-VLSMGNAVYGQLG 334



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 37/69 (53%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  +  G +H   V   G+VF WG +S  +LG G + +   P+LV +L+  N+  V+ 
Sbjct: 77  LDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVAC 136

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 137 GEFHTCAVT 145



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           P   A  + +    +ACG   +  +T++G + + GN  YG+LG+  + + ++P   +  +
Sbjct: 292 PTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHS-DGRIP--CLVED 348

Query: 460 KV---HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           K+    V  ++CG  H   + ++ + V+ +G G  G+LG G+T  +  P
Sbjct: 349 KIVGEQVLQIACGSYHVAVLTNRSE-VFTWGKGANGRLGHGDTEDRKVP 396


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V+S+G LYT+G   YG+LGHG   +  VP +V AL       +S G  HT
Sbjct: 228 VACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHT 287

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +   GK +Y +G  ++G++G G+     +P
Sbjct: 288 MALTSDGK-LYGWGWNKFGQVGAGDNADHCSP 318



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G +H+A VT +G +Y +G G YG LG G   +  VPE+V ++    +  V+CG  HT
Sbjct: 176 IAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHT 235

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + ++  G ++Y +G  +YG+LG G+
Sbjct: 236 ITVSSSG-SLYTYGWSKYGQLGHGD 259



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G  HS  + +   L T+G G+ G+LGHG   +  VP  +   +   + SV CG +HT
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              ++    VY++G G++G+LG GN+    TPQ
Sbjct: 79  TAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQ 111



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 11/120 (9%)

Query: 388 RITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTT 446
           R+ P V  G   P            ++ CG  H+   + + + +Y++G GD+GRLGHG +
Sbjct: 54  RLVPTVISGFDAPGI---------TSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNS 104

Query: 447 MNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +   P+ V AL  + ++ ++CG +H + +   G+ V ++G  + G+LGLG T     PQ
Sbjct: 105 TDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGE-VLSWGRNQNGQLGLGTTEDSLLPQ 163



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H   VT  G + ++G    G+LG GTT +  +P+ + A   + V+ ++ G  HT
Sbjct: 124 LACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHT 183

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + + G  +Y +G G YG LGLG+   +  P+
Sbjct: 184 AAVTEDGD-IYGWGWGRYGNLGLGDRNDRFVPE 215



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I I  ++ G  H LAV+  G+V +WG N + QLGLG   +   PQ + A    +
Sbjct: 113 VKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS 172

Query: 69  IRQVSAGRSHSAA 81
           ++ ++AG  H+AA
Sbjct: 173 VKMIAAGAEHTAA 185



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G++H+  +TS+G LY +G   +G++G G   +   P +V    +  V  V+CG  HT
Sbjct: 280 ISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHT 339

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +   +K K V+A+G G  G+LG G    + TP
Sbjct: 340 LAFTEK-KNVFAWGRGTSGQLGHGEIVDRNTP 370



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 40/75 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K+     IS G  H +A+++ G+++ WG N   Q+G G+  ++  P  V     + 
Sbjct: 269 VEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQK 328

Query: 69  IRQVSAGRSHSAAWT 83
           + QV+ G  H+ A+T
Sbjct: 329 VAQVACGWRHTLAFT 343



 Score = 45.1 bits (105), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 37/71 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I AF+ I +  I+ G EH  AV+  G ++ WG      LGLG++ +   P+ V ++    
Sbjct: 165 IQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDK 224

Query: 69  IRQVSAGRSHS 79
           +  V+ G  H+
Sbjct: 225 MVLVACGWRHT 235



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVS-NTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F    I  +  G +H  A S +  QV++WG     +LG GN  +   PQ V AL   
Sbjct: 60  ISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI 119

Query: 68  NIRQVSAGRSHSAA 81
            I+Q++ G SH  A
Sbjct: 120 KIKQLACGDSHCLA 133



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 42/76 (55%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + +   +V ++ G  H + VS++G ++ +G +   QLG G+  ++  P  V AL + +
Sbjct: 217 VSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSS 276

Query: 69  IRQVSAGRSHSAAWTA 84
             Q+S G  H+ A T+
Sbjct: 277 TSQISGGWRHTMALTS 292



 Score = 38.9 bits (89), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           +  ++ G  H LA +    VFAWG  +  QLG G  ++   P ++ ALS
Sbjct: 329 VAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 377


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  VT+ G LYT+G+G +  G LGHGT     +P+R+  AL+ + V  VSCG 
Sbjct: 211 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 270

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   G+ ++ FGDG +G LG GN
Sbjct: 271 WHTALITSMGQ-LFTFGDGSFGVLGHGN 297



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 12/105 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++CG  H+A++TS G L+TFG+G +G LGHG   +   P+ V +L+ +   +V+CG+ 
Sbjct: 264 AYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVW 323

Query: 472 HTVCIAD----------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           HT  I +              ++ +GDG+  +LG G+  + LKPT
Sbjct: 324 HTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPT 368



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 3/101 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P    +RL      + CG +H+A+VT NG ++T+G    GRLGHGT  +   P  V +L
Sbjct: 144 LPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESL 203

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEY--GKLGLG 497
              +V+ V+CG  HT  +   G+ +Y +GDG +  G LG G
Sbjct: 204 AACNVDFVACGEFHTCAVTTTGE-LYTWGDGTHNVGLLGHG 243



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H AV+T    ++T+G G  GRLGHG   + KVP +V AL    V  ++CG N T
Sbjct: 433 VACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFT 492

Query: 474 VCIA 477
             I 
Sbjct: 493 AAIC 496



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 12/98 (12%)

Query: 413 AIACGFKHSAVVT-----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A+ACG  H+A +            S G L+T+G+GD  RLGHG   +   P  V +L   
Sbjct: 317 AVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY 376

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
               V+CG + TVC+   GK V + G+  YG+LG  N+
Sbjct: 377 DFYRVACGHSLTVCLTTSGK-VLSMGNSVYGQLGNPNS 413



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 40/66 (60%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H++ ++ G+ HV  ++   +VF WG  ++ +LG G+  + + P  V AL ++ +R ++ G
Sbjct: 429 HVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 488

Query: 76  RSHSAA 81
            + +AA
Sbjct: 489 ANFTAA 494



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  +  G  H   V+  G VF WG +S  +LG G + +   P+LV +L+  N+  V+ 
Sbjct: 154 LDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVAC 213

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 214 GEFHTCAVT 222



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT---MNWKVPERVV 456
           P   A+ + Y    +ACG   +  +T++G + + GN  YG+LG+  +   +   V +R+ 
Sbjct: 367 PTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIA 426

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                HV  V+CG  H   +  + + V+ +G G  G+LG G+   +  P
Sbjct: 427 G---EHVLQVACGSYHVAVLTGRSE-VFTWGKGANGRLGHGDIEDRKVP 471


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G+  N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G T N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKV-VVNIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VY +G    G+LGLG+ G +PTP
Sbjct: 216 CSMAVVDTGE-VYVWGYNGNGQLGLGSGGNQPTP 248



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V+   ++ 
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRI 310

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 311 IEIAACHSTHTSA 323



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 41/93 (44%)

Query: 395 GGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P  
Sbjct: 243 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           VV      +E  +C   HT     +G  VY +G
Sbjct: 303 VVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP ++   L+   V  V+CG  H++ +  
Sbjct: 110 HVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGPTANQPIPR 196



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G   N   P+ V   L NK + 
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVV 208

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 209 NIACGQMCSMA 219



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  HV+  +  G+VF WG+N+ +QLG G   +   P Q+   L
Sbjct: 90  RRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169


>gi|297738141|emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 10/102 (9%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H A+V+++G L+T+G+G +G LGHG   +   P+ V +L+ + V++ +CG  HT
Sbjct: 367 VACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHT 426

Query: 474 VCIAD----------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             I +          KG  ++ +GDG+ G+LG G+   K  P
Sbjct: 427 AAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLP 468



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G KH+A+VT +G ++ +G G  GRLGH   M+   P+ V +L  V V+SVSCG   T
Sbjct: 260 ISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQT 319

Query: 474 VCIADKGKAVYAFGDGEYG 492
             +   G+ +Y +GD   G
Sbjct: 320 CALTHSGE-LYTWGDNGSG 337



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 5/152 (3%)

Query: 350 LYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQY 409
           L + ++  +R+I L G   A   +   + C+ G    GR+   V      P    +    
Sbjct: 249 LESTTMLDVREISLGGKHAALVTKHGEVFCW-GEGSGGRLGHKVNMDMGNPKIVESLTGV 307

Query: 410 YEAAIACGFKHSAVVTSNGYLYTFGNGDYG--RLGHGTTMNWKVPERVVA-LNKVHVESV 466
              +++CG   +  +T +G LYT+G+   G   +G     +  +P R+   LN   + +V
Sbjct: 308 LVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNV 367

Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           +CG  H   ++  G+ ++ +GDG +G LG G 
Sbjct: 368 ACGEWHMAIVSTSGQ-LFTYGDGTFGVLGHGK 398



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS+G +H   V+  G+VF WG  S  +LG    ++   P++V +L+   ++ VS 
Sbjct: 255 LDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSC 314

Query: 75  GRSHSAAWT 83
           G   + A T
Sbjct: 315 GEYQTCALT 323



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 19/104 (18%)

Query: 413 AIACGFKHSAVV-----------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A ACG  H+A +           T  G L+T+G+GD GRLGHG      +P  V  L   
Sbjct: 418 AAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDH 477

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               VSCG   TV +   G  VY  G        LG+T  + +P
Sbjct: 478 DFVQVSCGRMLTVGLTCLG-TVYTMGR-------LGDTEDRNSP 513


>gi|410056351|ref|XP_003954016.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like [Pan
           troglodytes]
          Length = 476

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 426 SNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVY 484
           S   +YTFG G +G+LG GT +     P+ +  +    +  +SCG NHT  I D G  +Y
Sbjct: 255 SENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIG-LMY 313

Query: 485 AFGDGEYGKLGLG 497
            FGDG +GKLGLG
Sbjct: 314 TFGDGRHGKLGLG 326



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 296 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 355

Query: 472 HTVCIADKGKAV 483
           H V  A   + V
Sbjct: 356 HMVIFAAPHRGV 367



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWTAPPL 87
            +  +S G  HSA  T+  L
Sbjct: 191 PVSWISCGYYHSAFVTSSGL 210



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+        ++    S  
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH 140

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156


>gi|156393973|ref|XP_001636601.1| predicted protein [Nematostella vectensis]
 gi|156223706|gb|EDO44538.1| predicted protein [Nematostella vectensis]
          Length = 505

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 143/330 (43%), Gaps = 46/330 (13%)

Query: 112 YGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLF 171
           +G L++  L  IR+R   L   +  I Q+V  LPL ++  +       + L+H +   LF
Sbjct: 25  FGVLRDHSLTSIRSRFAFLKTLNQSIEQLV--LPLTDMRTNATHPLSTAALLHSASTILF 82

Query: 172 APRVYTLPLVRSVGKTMLVGKNF-GPSVTVRRLTTKSKQTV---KPI----FAQISRQVV 223
               Y   +  +  K ML   N  G S     L+    +T+   KP     F Q ++ + 
Sbjct: 83  ----YDTKM--AFLKRMLDHSNHRGSSYIAPELSLDPLETIEVDKPASSGQFLQAAKGLS 136

Query: 224 KMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTP 276
            +  + LR+       P    +V L GE    +GG F   +  M  EL S  V LL+  P
Sbjct: 137 SVTSAGLRVKVATGGDPVFPLRVHLRGEQVLGSGGSFRHFMWLMARELQSPLVDLLMPCP 196

Query: 277 NGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWK-LI 334
           +  A+   N+ ++IL P  ++ S + L+   F G L G+++R+  PL + L P+ WK L+
Sbjct: 197 SAAANR--NKGKFILKPGPMTYSDEKLL--IFFGQLLGISLRSDIPLAVDLMPVFWKSLL 252

Query: 335 VQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEG---------ASW 385
            ++     DL   D L    LR   +I     T+  F  +    CFE           S 
Sbjct: 253 GRQLDAKEDLRATDILTYNYLRRFSEIE----TKEEFATL----CFEADLCPYYFVYTSL 304

Query: 386 TGRITPIVTGGQSVPLTFANRLQYYEAAIA 415
            G    +   G  VP+T+ NR +Y +A  A
Sbjct: 305 PGDEVELCPDGADVPVTWENRREYVDAIRA 334


>gi|443723279|gb|ELU11772.1| hypothetical protein CAPTEDRAFT_214238 [Capitella teleta]
          Length = 510

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  H+A + SNG  YTFG+  +G+LG     +  +P RV++L+K+ V  VSCG  
Sbjct: 387 AMVAMGTSHAAAIMSNGECYTFGSNQFGQLGIPANGDNNMPTRVLSLSKIAVSMVSCGDT 446

Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
            TV I   GK +Y++G    G+LG
Sbjct: 447 FTVAIMKDGK-IYSWGKAARGRLG 469



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 35/65 (53%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +++GT H  A+ + G+ + +G+N   QLG+    +   P  VL+LS   +  VS G 
Sbjct: 386 IAMVAMGTSHAAAIMSNGECYTFGSNQFGQLGIPANGDNNMPTRVLSLSKIAVSMVSCGD 445

Query: 77  SHSAA 81
           + + A
Sbjct: 446 TFTVA 450


>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
 gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
 gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
          Length = 480

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG +H+ V+T N  +YTFG G +G+LG GT +     P+ +  +    +  +SCG NH
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRHGKLGLG 330



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT++G LY FG  + G+LG    +  N + P+ V  + +  V  V+CG  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +   AVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--NAVYTFGLGQFGQLGLG 277



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     V    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPV--SWISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
             +   G+ +Y FG+ E GKLGL N   G   TPQ
Sbjct: 203 AFVTTDGE-LYVFGEPENGKLGLPNQLLGNHRTPQ 236



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKL 91

Query: 72  VSAGRSHSAAWT 83
            + GR+H+   T
Sbjct: 92  AACGRNHTLVST 103



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG  H+A++T  G +YTFG+G +G+LG G     N  +P       +  V+ V+CG  
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 359

Query: 472 HTVCIADKGKAV 483
           H V  A   + V
Sbjct: 360 HMVVFAAPHRGV 371



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWT 83
            +  +S G  HSA  T
Sbjct: 191 PVSWISCGYYHSAFVT 206



 Score = 41.6 bits (96), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
           IS G  H   V+  G+++ +G   + +LGL NQ+  N+R PQLV  +  K I QV+ G  
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGE 253

Query: 78  HSAAWT 83
           H+   T
Sbjct: 254 HTVVLT 259



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+        ++    S  
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH 140

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156


>gi|29835218|gb|AAH51044.1| AU042671 protein [Mus musculus]
          Length = 533

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 27/222 (12%)

Query: 215 FAQISRQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSG 267
           F Q +RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S 
Sbjct: 144 FCQAARQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSS 203

Query: 268 AVPLLVRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326
           ++ LL+  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L
Sbjct: 204 SLSLLLLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDL 259

Query: 327 SPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII---------- 375
            P  WK +V EP+    DL++ D L    ++    I+     EA   EI           
Sbjct: 260 LPSFWKTLVGEPLDPDQDLQEADILTYNYVKKFESINDESELEALCAEIASQHLATESPE 319

Query: 376 -PLEC--FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            P  C  F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 320 GPKPCCRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 360


>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
           garnettii]
          Length = 551

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V   G ++ +G    G+
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P R+ AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIV-TIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ V+ +G    G+LGLG++G +PTP
Sbjct: 216 CSMAVVDTGE-VFVWGYNGNGQLGLGSSGNQPTP 248



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       I A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 240 GSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 299

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 300 PTPVVVEKDRVIEIAACHSAHTSA 323



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  IV I+ G    +AV +TG+VF WG N + QLGLG+  N   P  + AL  
Sbjct: 197 RVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            VV      +E  +C   HT     +G  VY +G
Sbjct: 302 PVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQPIPR 196



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK I 
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIV 208

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 209 TIACGQMCSMA 219



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  HV+  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  VT+ G LYT+G+G +  G LGHGT     +P+R+  AL+ + V  VSCG 
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   G+ ++ FGDG +G LG GN
Sbjct: 194 WHTALITSMGQ-LFTFGDGSFGVLGHGN 220



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 12/105 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++CG  H+A++TS G L+TFG+G +G LGHG   +   P+ V +L+ +   +V+CG+ 
Sbjct: 187 AYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVW 246

Query: 472 HTVCIAD----------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           HT  I +              ++ +GDG+  +LG G+  + LKPT
Sbjct: 247 HTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPT 291



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 3/101 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P    +RL      + CG +H+A+VT NG ++T+G    GRLGHGT  +   P  V +L
Sbjct: 67  LPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESL 126

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEY--GKLGLG 497
              +V+ V+CG  HT  +   G+ +Y +GDG +  G LG G
Sbjct: 127 AACNVDFVACGEFHTCAVTTTGE-LYTWGDGTHNVGLLGHG 166



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H AV+T    ++T+G G  GRLGHG   + KVP +V AL    V  ++CG N T
Sbjct: 356 VACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFT 415

Query: 474 VCIA 477
             I 
Sbjct: 416 AAIC 419



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 12/98 (12%)

Query: 413 AIACGFKHSAVVT-----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A+ACG  H+A +            S G L+T+G+GD  RLGHG   +   P  V +L   
Sbjct: 240 AVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY 299

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
               V+CG + TVC+   GK V + G+  YG+LG  N+
Sbjct: 300 DFYRVACGHSLTVCLTTSGK-VLSMGNSVYGQLGNPNS 336



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 40/66 (60%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H++ ++ G+ HV  ++   +VF WG  ++ +LG G+  + + P  V AL ++ +R ++ G
Sbjct: 352 HVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411

Query: 76  RSHSAA 81
            + +AA
Sbjct: 412 ANFTAA 417



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT---MNWKVPERVV 456
           P   A+ + Y    +ACG   +  +T++G + + GN  YG+LG+  +   +   V +R+ 
Sbjct: 290 PTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIA 349

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                HV  V+CG  H   +  + + V+ +G G  G+LG G+   +  P
Sbjct: 350 G---EHVLQVACGSYHVAVLTGRSE-VFTWGKGANGRLGHGDIEDRKVP 394



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  +  G  H   V+  G VF WG +S  +LG G + +   P+LV +L+  N+  V+ 
Sbjct: 77  LDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVAC 136

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 137 GEFHTCAVT 145


>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
           protein 2 [Mustela putorius furo]
          Length = 344

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 386 TGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           +G++    T  Q +P      LQ      IACG   S  V + G +Y +G    G+LG G
Sbjct: 110 SGQVGSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLG 169

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           ++ N   P R+ AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN   +  
Sbjct: 170 SSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKSNQSY 228

Query: 505 P 505
           P
Sbjct: 229 P 229



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 86  VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKV-VVNIACGQM 144

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + + G+ VY +G    G+LGLG++G +PTP
Sbjct: 145 CSMAVVNTGE-VYVWGYNGNGQLGLGSSGNQPTP 177



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV NTG+V+ WG N + QLGLG+  N   P  + AL  
Sbjct: 126 RVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 185

Query: 67  KNIRQVSAGRSHS 79
             +++V+ G +H+
Sbjct: 186 IRVQRVACGYAHT 198



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V+   ++ 
Sbjct: 180 IAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRI 239

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 240 IEIAACHSAHTSA 252



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 42/95 (44%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 171 SGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPA 230

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGD 488
            VV      +E  +C   HT     +G  VY +G 
Sbjct: 231 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 265



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 39  HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTS 98

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +  P+
Sbjct: 99  DGE-VFAWGYNNSGQVGSGSTANQLIPR 125



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  + +++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK + 
Sbjct: 78  LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKVVV 137

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 138 NIACGQMCSMA 148



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7  RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
          R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 19 RRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 78

Query: 65 SNKNIRQVSAGRSHSAAWTA 84
          SNK + +V+ G  HS   T+
Sbjct: 79 SNKQVTEVACGSYHSLVLTS 98


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q  P   ++ LQ      IACG   S  V  NG +Y +G    G+
Sbjct: 162 GYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQ 221

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G   N + P R+ AL  V++  V+CG  HT+ + D+G  VYA+G   YG+LG GN  
Sbjct: 222 LGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEG-FVYAWGANSYGQLGTGNKS 280

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 281 NQALPTP 287



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 4/112 (3%)

Query: 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           G +  L   N L      +ACG  H+  +T++G +Y +G  + G++G G+T N   P RV
Sbjct: 124 GLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRV 183

Query: 456 VAL--NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +   NKV V +++CG   ++ + D G+ +Y +G    G+LGLGN G + TP
Sbjct: 184 SSCLQNKV-VVNIACGQLCSMAVLDNGE-IYGWGYNCNGQLGLGNNGNQQTP 233



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV + G+++ WG N + QLGLGN  N + P  + AL  
Sbjct: 182 RVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQG 241

Query: 67  KNIRQVSAGRSHSAAWT 83
            NI QV+ G +H+ A T
Sbjct: 242 VNIVQVACGYAHTLALT 258



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T++G +Y +G+  Y +LG+GTT +   P  V   L    V  V+CG +HT+ +  
Sbjct: 95  HVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTT 154

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ VYA+G    G++G G+T  +PTP+
Sbjct: 155 DGE-VYAWGYNNSGQVGSGSTANQPTPR 181



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A + ++IV ++ G  H LA+++ G V+AWG NS  QLG GN+ N   P  +     + 
Sbjct: 236 IAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALPTPINTDKERI 295

Query: 69  IRQVSAGRSHSAA 81
           +   +   SH++A
Sbjct: 296 VEVAACHTSHTSA 308



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 41/93 (44%)

Query: 395 GGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           G Q  P   A         +ACG+ H+  +T  G++Y +G   YG+LG G   N  +P  
Sbjct: 228 GNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALPTP 287

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +    +  VE  +C  +HT     +   V  +G
Sbjct: 288 INTDKERIVEVAACHTSHTSAAKTQSGQVLMWG 320



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQVSAG 75
           + +++ G+ H +A++  G+V+AWG N+  Q+G G+  N   P+ V + L NK +  ++ G
Sbjct: 139 VTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACG 198

Query: 76  RSHSAA 81
           +  S A
Sbjct: 199 QLCSMA 204



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-L 64
           R I       IV +S GT  HV+  +  G+V+AWG+N  +QLG G   +   P LV   L
Sbjct: 75  RRIDVLCGKKIVSLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNL 134

Query: 65  SNKNIRQVSAGRSHSAAWT 83
            +K + +V+ G  H+ A T
Sbjct: 135 LSKRVTEVACGSHHTIALT 153



 Score = 38.1 bits (87), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 4/95 (4%)

Query: 415 ACGFKHSA----VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           AC F  +A     VT N  ++  G    G LG G   +   P R+  L    + S+S G 
Sbjct: 33  ACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGT 92

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              V IA     VYA+G   Y +LG G T    TP
Sbjct: 93  GPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTP 127


>gi|390336513|ref|XP_791849.3| PREDICTED: protein RCC2 homolog [Strongylocentrotus purpuratus]
          Length = 477

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           HS ++T  G   TFG  D  +LGHG      VP  V  L   H+ + +CG NHT+C+ D 
Sbjct: 111 HSVIITEEGKAMTFGRNDREQLGHGDDYRRDVPTLVEGLEDHHIVTAACGRNHTMCLTDD 170

Query: 480 GKAVYAFGDGEYGKLGLG 497
           G  V+AFGD   G+ G+G
Sbjct: 171 G-TVFAFGDNRMGQCGIG 187


>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Hydra magnipapillata]
          Length = 731

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 52/85 (61%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +HS ++TS G +YTFG G  G+LGH    +  +P+ VV L    V  ++CG  HT
Sbjct: 176 ISCGEEHSVLLTSAGRVYTFGCGSSGQLGHNEFEDQFIPKMVVDLMGTPVTQIACGRKHT 235

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           +    KG  +Y+FG    G+LG+G+
Sbjct: 236 LAHVMKGNKLYSFGLNVKGQLGIGS 260



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 43/71 (60%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N  I+ I  G  H LA++ +G +FAWG NS  QLGLG+Q +   P  + +++ K++R +S
Sbjct: 118 NCPIIQICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYIS 177

Query: 74  AGRSHSAAWTA 84
            G  HS   T+
Sbjct: 178 CGEEHSVLLTS 188



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I  G  HS  +T +G ++ +G   +G+LG G   +   P ++ ++N  HV  +SCG  H+
Sbjct: 124 ICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYISCGEEHS 183

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           V +   G+ VY FG G  G+LG
Sbjct: 184 VLLTSAGR-VYTFGCGSSGQLG 204



 Score = 45.1 bits (105), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 34  GQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTP 92
           G VF+WG+N   Q+G+ ++ + Y  PQLV  LSN  I Q+ AG  HS A T         
Sbjct: 85  GHVFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNCPIIQICAGGHHSLALTISG-TIFAW 143

Query: 93  GHTPSSSLRLGLPQD 107
           G      L LG  QD
Sbjct: 144 GKNSFGQLGLGDQQD 158



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 45/95 (47%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +    H+  IS G EH + +++ G+V+ +G  S  QLG     +   P++V+ L    
Sbjct: 165 IQSMNGKHVRYISCGEEHSVLLTSAGRVYTFGCGSSGQLGHNEFEDQFIPKMVVDLMGTP 224

Query: 69  IRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG 103
           + Q++ GR H+ A        ++ G      L +G
Sbjct: 225 VTQIACGRKHTLAHVMKGNKLYSFGLNVKGQLGIG 259


>gi|345790879|ref|XP_534683.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            C12orf51 [Canis lupus familiaris]
          Length = 4245

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 145/338 (42%), Gaps = 36/338 (10%)

Query: 105  PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
            P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 3743 PADAADPRVACLLNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTPMYAHSIAALL 3800

Query: 164  HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
              +   +F     T+ + R +  T+     +  P +T+  L     + + +    F Q +
Sbjct: 3801 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLEIVGGEIRASENSYFCQAA 3859

Query: 220  RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
            RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 3860 RQLASVSSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 3919

Query: 273  VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L P  W
Sbjct: 3920 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDLLPSFW 3975

Query: 332  KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII--------------P 376
            K +V EP+    DL++ D L    ++    I+     EA   EI               P
Sbjct: 3976 KTLVGEPLDPEQDLQEADILTYNYVKKFESINDETELEALCAEIASQHLATESPEGPNKP 4035

Query: 377  LECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
               F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 4036 CCRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 4072


>gi|338727674|ref|XP_001490551.3| PREDICTED: probable E3 ubiquitin-protein ligase C12orf51-like [Equus
            caballus]
          Length = 4246

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 28/223 (12%)

Query: 215  FAQISRQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSG 267
            F Q +RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S 
Sbjct: 3856 FCQAARQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSS 3915

Query: 268  AVPLLVRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326
            ++ LL+  P+   +   N+ +YIL P  L+   + L+HF  LG L G+AIR   PLPL L
Sbjct: 3916 SLSLLLLCPSSAVNK--NKGKYILTPSPLTYGEEQLLHF--LGQLLGIAIRADVPLPLDL 3971

Query: 327  SPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII---------- 375
             P  WK +V EP+    DL++ D L    ++    I+     EA   EI           
Sbjct: 3972 LPSFWKTLVGEPLDPDQDLQEADVLTYNYVKKFESINDETELEALCAEIASQHLATESPD 4031

Query: 376  ----PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
                P   F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 4032 SPNKPCCRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 4073


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG +H+AV+T +G + TFG G YG+LGH +  +  +P +V  L  + V  ++CG  HT
Sbjct: 248 ISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHT 307

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +   +    +Y+FG G  G+LG   T    TP
Sbjct: 308 MAYVESSGRIYSFGLGGNGQLGSKGTTNCNTP 339



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 58/92 (63%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG KHS  ++++G ++++GN  +G+LG G+T N   P+ + +L  +    +  G +H+
Sbjct: 144 VACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHS 203

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             ++  G AV+ FG   +G+LGLG+TG +  P
Sbjct: 204 FVLSKSG-AVFGFGRNTFGQLGLGDTGDRKYP 234



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 47/73 (64%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +    ++ IV ++ G +H LA+SN G++F+WGNNS  QLG+G+  N  +PQ + +L+ 
Sbjct: 131 RMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTG 190

Query: 67  KNIRQVSAGRSHS 79
               Q+ AG SHS
Sbjct: 191 IPFCQIVAGGSHS 203



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 58/96 (60%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM---NWKVPERVVALNKVHVESVSCGL 470
           ++CG  H+ VV     ++++G  D G+LGH       N + P  V  L+ + +  V+CG 
Sbjct: 89  VSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGG 148

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            H++ +++ G+ ++++G+  +G+LG+G+T  +P PQ
Sbjct: 149 KHSLALSNDGR-IFSWGNNSHGQLGIGSTKNQPKPQ 183



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
             I  G  HS V++ +G ++ FG   +G+LG G T + K P  V +L  + V  +SCG  
Sbjct: 194 CQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEE 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           HT  +   G  V  FG G YG+LG  +   +  P+
Sbjct: 254 HTAVLTLDG-GVLTFGAGSYGQLGHNSNNHEALPR 287



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 3/82 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +H+  V + G +YT G+ DYG+LG       K P  + AL+   ++ VSCG  H 
Sbjct: 39  VSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDK--GHKRPTVITALDTQSIQQVSCGDYHN 96

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           + + DK + V+++G  + G+LG
Sbjct: 97  LVVNDKYQ-VFSWGYDDCGQLG 117



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 34/244 (13%)

Query: 221 QVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVA 280
           Q++K    DL+ P    KV  +GE A DAGG+  +               L++R    V 
Sbjct: 683 QLMKQSSPDLKKP---LKVIFIGEEAIDAGGLKKEFFL------------LIIRE---VM 724

Query: 281 DTGYNRDRYILNPDL----SESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQ 336
           D  +   RY            S +    F  +G+L G+AI     + L     ++K +++
Sbjct: 725 DPKFGMFRYYEETQSVWFHDRSFEESSMFFLIGVLCGLAIYNSTIIDLHFPLALYKKLMK 784

Query: 337 EPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPI--VT 394
             VT  DL+       + L       L G  E +F ++  L       + G I  +  V 
Sbjct: 785 RNVTLDDLKQIQPDVGRGLE-----QLLGYNEDDFEDVFCLNFTIACEYYGSIETVELVK 839

Query: 395 GGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
            G ++P+T  NR +Y  A +    +H    +       FG G + ++  G  +    P+ 
Sbjct: 840 DGNNIPVTKENREEYVNAYV----EHVLNKSVQNQFDAFGTG-FHKVCGGKVLELFHPKE 894

Query: 455 VVAL 458
           ++A+
Sbjct: 895 LMAM 898



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 7/80 (8%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-----GNQINYREPQLVLA 63
           I A     I  +S G  H L V++  QVF+WG +   QLG      GN  N R P++V  
Sbjct: 78  ITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGN--NSRRPRMVKE 135

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           LS+  I QV+ G  HS A +
Sbjct: 136 LSSLQIVQVACGGKHSLALS 155



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 38/77 (49%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + +   I    I  G  H   +S +G VF +G N+  QLGLG+  + + P  V +L +
Sbjct: 183 QELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRS 242

Query: 67  KNIRQVSAGRSHSAAWT 83
             +  +S G  H+A  T
Sbjct: 243 LKVTHISCGEEHTAVLT 259



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 38/75 (50%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           H+ + +++ +  IS G EH   ++  G V  +G  S  QLG  +  +   P+ V  L   
Sbjct: 236 HVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVFELMGL 295

Query: 68  NIRQVSAGRSHSAAW 82
            + Q++ GR H+ A+
Sbjct: 296 EVTQLACGRMHTMAY 310



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 19 DISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSH 78
          ++S G +H + V   G V+  G+N   Q  LG    ++ P ++ AL  ++I+QVS G  H
Sbjct: 38 EVSCGRQHTVFVLAEGTVYTCGSNDYGQ--LGQDKGHKRPTVITALDTQSIQQVSCGDYH 95

Query: 79 S 79
          +
Sbjct: 96 N 96


>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
           caballus]
          Length = 551

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG   S  V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G + N   P RV AL  + V+  +CG  HT+ + D+G+ VY +G   YG+LG GN  
Sbjct: 237 LGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQ-VYVWGANSYGQLGTGNKS 295

Query: 501 LKPTP 505
            +P P
Sbjct: 296 NQPYP 300



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VY +G    G+LGLG +G +PTP
Sbjct: 216 CSMAVVDTGE-VYVWGYSGNGQLGLGGSGNQPTP 248



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + TS G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HVVLATSEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQPIPR 196



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 46/106 (43%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G S  G++    +G Q  P   A          ACG+ H+ V+T  G +Y +G   YG+L
Sbjct: 230 GYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQL 289

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G G   N   P  ++      +E  +C   HT     +G  VY +G
Sbjct: 290 GTGNKSNQPYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V+I+ G    +AV +TG+V+ WG + + QLGLG   N   P  V AL  
Sbjct: 197 RVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++ + G +H+   T
Sbjct: 257 IRVQRAACGYAHTLVLT 273



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +   + G  H L +++ GQV+ WG NS  QLG GN+ N   P  ++   ++ 
Sbjct: 251 VAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQPYPTPIIVEKDRI 310

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 311 IEIAACHSTHTSA 323



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L NK + 
Sbjct: 149 LSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVV 208

Query: 71  QVSAGRSHSAA 81
            ++ G+  S A
Sbjct: 209 NIACGQMCSMA 219



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     +  +S G+  HV+  ++ G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKRVIEVACGSYHSLVLTS 169


>gi|351711669|gb|EHB14588.1| Putative E3 ubiquitin-protein ligase HERC6 [Heterocephalus glaber]
          Length = 895

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 2/95 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            +ACG  H+A++T +G ++TFG G +G+LGH +T N   P  V  L+   V  ++CG  H
Sbjct: 44  CVACGGAHTALLTQDGLMFTFGAGKHGQLGHNSTKNELRPCLVTELSGNRVTQIACGRWH 103

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG--NTGLKPTP 505
           T+  A       +FG GE G+LG G  +  L P P
Sbjct: 104 TLAYASDLDVFSSFGFGEEGQLGNGGKHNQLIPLP 138



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 424 VTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAV 483
           ++ +G +Y++G  D G+LG G T N   P  V   +   VE V+CG  HT  +   G  +
Sbjct: 3   LSMSGNVYSWGGNDCGQLGLGHTKNTDSPSLVEVPDNQKVECVACGGAHTALLTQDG-LM 61

Query: 484 YAFGDGEYGKLGLGNT 499
           + FG G++G+LG  +T
Sbjct: 62  FTFGAGKHGQLGHNST 77



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query: 28 LAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
          +A+S +G V++WG N   QLGLG+  N   P LV    N+ +  V+ G +H+A  T
Sbjct: 1  MALSMSGNVYSWGGNDCGQLGLGHTKNTDSPSLVEVPDNQKVECVACGGAHTALLT 56



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 34/71 (47%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N  +  ++ G  H   ++  G +F +G     QLG  +  N   P LV  LS   + Q++
Sbjct: 39  NQKVECVACGGAHTALLTQDGLMFTFGAGKHGQLGHNSTKNELRPCLVTELSGNRVTQIA 98

Query: 74  AGRSHSAAWTA 84
            GR H+ A+ +
Sbjct: 99  CGRWHTLAYAS 109


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           AA++CG  H+AVVTS+G L+TFG+G +G LGHG   +   P  V +L  +     +CG+ 
Sbjct: 415 AAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVW 474

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   +  P
Sbjct: 475 HTAAVVEVMVGSSSSSNCSSGK-LFTWGDGDKGRLGHGDKESRLVP 519



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 6/97 (6%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGH-GTTMNWKVPERVVA-LNKVHVESVSCG 469
           +ACG  HS  VT +G LYT+G   +  G LG+     NW VP+++   L  +HV +VSCG
Sbjct: 362 VACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNW-VPKKLNGPLEGIHVAAVSCG 420

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             HT  +   G+ ++ FGDG +G LG G+     TP+
Sbjct: 421 PWHTAVVTSSGQ-LFTFGDGTFGVLGHGDRRSVSTPR 456



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T+ G++YT G+  YG+LG+    + K+P RV   
Sbjct: 518 VPTCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQLGN-PQADGKLPVRVEGK 576

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+K  VE + CG  H   +  + + VY +G G  G+LG G+T  + +P
Sbjct: 577 LSKNFVEELDCGAYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRSSP 623



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G L+T+G+GD GRLGHG   +  VP  V AL + +
Sbjct: 470 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPN 529

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G  VY  G   YG+LG
Sbjct: 530 FCQVACGHSMTVALTTTGH-VYTMGSPVYGQLG 561



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 36/64 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V+SV CG + T
Sbjct: 585 LDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFT 644

Query: 474 VCIA 477
             I 
Sbjct: 645 AAIC 648



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H+A+VT  G ++++G    GRLGHG   +   P+ V  L   +VE V+CG  H+
Sbjct: 310 IACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHS 369

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGNTGLKPTPQ 506
             +   G  +Y +G   +  G LG  N      P+
Sbjct: 370 CAVTLSGD-LYTWGGSSHNCGLLGYRNEASNWVPK 403



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G  H   V+  G+VF+WG     +LG G   +   P+LV  L N N+  V+ 
Sbjct: 305 LDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVAC 364

Query: 75  GRSHSAAWT 83
           G  HS A T
Sbjct: 365 GEYHSCAVT 373



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 37/65 (56%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + ++  G  HV  +++  +V+ WG  ++ +LG G+  +   P +V AL +K ++ V  G 
Sbjct: 582 VEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGT 641

Query: 77  SHSAA 81
           S +AA
Sbjct: 642 SFTAA 646



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 12/89 (13%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           R + + K +  V  + G  H  AV             ++G++F WG+    +LG G++ +
Sbjct: 456 REVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKES 515

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWT 83
              P  V AL   N  QV+ G S + A T
Sbjct: 516 RLVPTCVAALVEPNFCQVACGHSMTVALT 544



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 38/70 (54%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  +S G  H   V+++GQ+F +G+ +   LG G++ +   P+ V +L      +
Sbjct: 409 LEGIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVR 468

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 469 AACGVWHTAA 478


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  VT+ G LYT+G+G +  G LGHGT     +P+R+  AL+ + V  VSCG 
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   G+ ++ FGDG +G LG GN
Sbjct: 194 WHTALITSMGQ-LFTFGDGSFGVLGHGN 220



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 12/105 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++CG  H+A++TS G L+TFG+G +G LGHG   +   P+ V +L+ +   +V+CG+ 
Sbjct: 187 AYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVW 246

Query: 472 HTVCIAD----------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           HT  I +              ++ +GDG+  +LG G+  + LKPT
Sbjct: 247 HTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPT 291



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 3/101 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P    +RL      + CG +H+A+VT NG ++T+G    GRLGHGT  +   P  V +L
Sbjct: 67  LPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESL 126

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEY--GKLGLG 497
              +V+ V+CG  HT  +   G+ +Y +GDG +  G LG G
Sbjct: 127 AACNVDFVACGEFHTCAVTTTGE-LYTWGDGTHNVGLLGHG 166



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H AV+T    ++T+G G  GRLGHG   + KVP +V AL    V  ++CG N T
Sbjct: 356 VACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFT 415

Query: 474 VCIA 477
             I 
Sbjct: 416 AAIC 419



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 12/98 (12%)

Query: 413 AIACGFKHSAVVT-----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A+ACG  H+A +            S G L+T+G+GD  RLGHG   +   P  V +L   
Sbjct: 240 AVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY 299

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
               V+CG + TVC+   GK V + G+  YG+LG  N+
Sbjct: 300 DFYRVACGHSLTVCLTTSGK-VLSMGNSVYGQLGNPNS 336



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 40/66 (60%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H++ ++ G+ HV  ++   +VF WG  ++ +LG G+  + + P  V AL ++ +R ++ G
Sbjct: 352 HVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411

Query: 76  RSHSAA 81
            + +AA
Sbjct: 412 ANFTAA 417



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  +  G  H   V+  G VF WG +S  +LG G + +   P+LV +L+  N+  V+ 
Sbjct: 77  LDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVAC 136

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 137 GEFHTCAVT 145



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT---MNWKVPERVV 456
           P   A+ + Y    +ACG   +  +T++G + + GN  YG+LG+  +   +   V +R+ 
Sbjct: 290 PTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIA 349

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                HV  V+CG  H   +  + + V+ +G G  G+LG G+   +  P
Sbjct: 350 G---EHVLQVACGSYHVAVLTGRSE-VFTWGKGANGRLGHGDIEDRKVP 394


>gi|194391082|dbj|BAG60659.1| unnamed protein product [Homo sapiens]
          Length = 281

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 5/110 (4%)

Query: 399 VPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           VP   +  L   +   +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV  
Sbjct: 117 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 176

Query: 458 L--NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              NKV V +++CG    + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 177 CLQNKV-VVTIACGQMCCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 224



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 86  HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 145

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 146 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 172



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L NK + 
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 184

Query: 71  QVSAGR 76
            ++ G+
Sbjct: 185 TIACGQ 190



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 35/65 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 173 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 232

Query: 67  KNIRQ 71
             +++
Sbjct: 233 IRVQR 237



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 66  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 125

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 126 SNKQVIEVACGSYHSLVLTS 145



 Score = 38.1 bits (87), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 5/102 (4%)

Query: 386 TGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+LG G
Sbjct: 157 SGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 216

Query: 445 TTMNWKVPERVVALNKVHVE----SVSCGLNHTVCIADKGKA 482
            + N   P RV AL  + V+      S  L+  VC  D G A
Sbjct: 217 NSGNQPTPCRVAALQGIRVQRDYRDCSLSLHTHVCGQDAGWA 258


>gi|340502738|gb|EGR29393.1| rcc1 family hect domain protein, putative [Ichthyophthirius
           multifiliis]
          Length = 879

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 59/218 (27%)

Query: 289 YILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDL---- 344
           +I N +++ SL+SL HF+  G L   A    K L           I++E  +   L    
Sbjct: 16  FITNDEVNGSLESLKHFR--GRLITNACGGYKKL----------FIIEESYSNEGLVSSL 63

Query: 345 -----EDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSV 399
                +D D  +A+  ++++++                + F+  +  G+I  +V      
Sbjct: 64  HAPEYDDYDQTFAEEAKSVKNLE---------------DIFQAFNDKGQIKKMV------ 102

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
                           CG KH+  +T  G +Y++G G+YG LGHG  +   +P+ ++  N
Sbjct: 103 ----------------CGKKHTVFITEEGKIYSYGIGEYGSLGHGGLIYSDIPKNIIKFN 146

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           +  +  ++CG  HT+ + D    +Y++G G  G+LG G
Sbjct: 147 QKKIIQITCGEFHTLALTDT-YDLYSWGRGFEGQLGTG 183



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 11/102 (10%)

Query: 401 LTFANRLQ---YYEAAIAC---GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
           + F N L+     E  I C   G+ HSA V  +G LYT+G    G+LGHG+  +   P++
Sbjct: 256 VNFGNNLKEENILEDKIICVSGGYGHSAAVLESGELYTWGLNFNGQLGHGSIKSSYFPQK 315

Query: 455 VV----ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYG 492
           VV      N    ++V CG N+T  I   G+ ++++G G  G
Sbjct: 316 VVKDILGNNIPLFKTVQCGYNNTFAIDINGQ-LWSWGGGNLG 356



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 9/101 (8%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES-------- 465
           IACG  HS  ++ +G LY +G    G+ G+G + + K P+ V   N +  E+        
Sbjct: 215 IACGAYHSLAISDDGILYAWGEARLGQTGNGKSKSEKYPKIVNFGNNLKEENILEDKIIC 274

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           VS G  H+  + + G+ +Y +G    G+LG G+      PQ
Sbjct: 275 VSGGYGHSAAVLESGE-LYTWGLNFNGQLGHGSIKSSYFPQ 314


>gi|308487389|ref|XP_003105890.1| CRE-GLO-4 protein [Caenorhabditis remanei]
 gi|308254946|gb|EFO98898.1| CRE-GLO-4 protein [Caenorhabditis remanei]
          Length = 1411

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 4/85 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK--VPERVVALNKVHVESVSCGLN 471
           IACG  HSA V S+G LYTFG G +G+LGHG   N    VP +V  L    +  V+CG  
Sbjct: 849 IACGQFHSAFVCSDGTLYTFGWGIWGQLGHGGRFNSNHLVPTKVNGLIS-KITQVACGRA 907

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGL 496
           HTV + D G+ V   G G YG++G+
Sbjct: 908 HTVALTDNGR-VLVCGSGSYGQMGV 931



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 412  AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
            A +ACG  HSA++T+ G LYT+G G   +LGHG     + P +V   + V    VS G N
Sbjct: 1043 AHVACGLSHSALITTEGSLYTWGKGLDYQLGHGNKTERQEPHQVFEPSDVKWTHVSLGNN 1102

Query: 472  HTVCIADKGKAVYAFGDGEYGKLGL 496
            HT+   D+G +VYA+G  ++G+ G+
Sbjct: 1103 HTIGATDEG-SVYAWGKNDFGQCGV 1126



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 12/90 (13%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-----VESVS 467
           AIACG +H  V++S+G L  +G   YG+ G G +       R+  L ++      +E ++
Sbjct: 797 AIACGAEHILVLSSSGQLSAWGGNKYGQCGVGHSF------RLANLQQIDGDWPAIERIA 850

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           CG  H+  +   G  +Y FG G +G+LG G
Sbjct: 851 CGQFHSAFVCSDG-TLYTFGWGIWGQLGHG 879



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 36/77 (46%)

Query: 7    RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
            R I  F +  I  ++ G  H   ++  G ++ WG   D QLG GN+   +EP  V   S+
Sbjct: 1032 REIKHFLDGTIAHVACGLSHSALITTEGSLYTWGKGLDYQLGHGNKTERQEPHQVFEPSD 1091

Query: 67   KNIRQVSAGRSHSAAWT 83
                 VS G +H+   T
Sbjct: 1092 VKWTHVSLGNNHTIGAT 1108



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I+ G EH+L +S++GQ+ AWG N   Q G+G+       Q +       I +++ G+ HS
Sbjct: 798 IACGAEHILVLSSSGQLSAWGGNKYGQCGVGHSFRLANLQQIDG-DWPAIERIACGQFHS 856

Query: 80  A 80
           A
Sbjct: 857 A 857


>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 10/102 (9%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H A+V+++G L+T+G+G +G LGHG   +   P+ V +L+ + V++ +CG  HT
Sbjct: 419 VACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHT 478

Query: 474 VCIAD----------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             I +          KG  ++ +GDG+ G+LG G+   K  P
Sbjct: 479 AAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLP 520



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G KH+A+VT +G ++ +G G  G LGH   M+   P+ V +L  V V+SVSCG   T
Sbjct: 312 ISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQT 371

Query: 474 VCIADKGKAVYAFGDGEYG 492
             +   G+ +Y +GD   G
Sbjct: 372 CALTHSGE-LYTWGDNGSG 389



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 42/70 (60%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            K+  + +IS G+ HV A+++ G ++ WG  ++ QLGLG+  +   P +V AL ++ +  
Sbjct: 578 LKDEFVKEISSGSYHVAALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVES 637

Query: 72  VSAGRSHSAA 81
           ++ G   +AA
Sbjct: 638 IACGSGFTAA 647



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 35/64 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  H A +TS G LYT+G G  G+LG G T +   P  V AL    VES++CG   T
Sbjct: 586 ISSGSYHVAALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACGSGFT 645

Query: 474 VCIA 477
             I 
Sbjct: 646 AAIC 649



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 44/94 (46%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVV-----------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A ACG  H+A +           T  G L+T+G+GD GRLGHG      +P  V  L   
Sbjct: 470 AAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDH 529

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               VSCG   TV +   G  VY  G   +G+LG
Sbjct: 530 DFVQVSCGRMLTVGLTCLG-TVYTMGSAVHGQLG 562



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 4/89 (4%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYG--RLGHGTTMNWKVPERVVA-LNKVHVESVSCG 469
           +++CG   +  +T +G LYT+G+   G   +G     +  +P R+   LN   + +V+CG
Sbjct: 363 SVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACG 422

Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             H   ++  G+ ++ +GDG +G LG G 
Sbjct: 423 EWHMAIVSTSGQ-LFTYGDGTFGVLGHGK 450



 Score = 45.1 bits (105), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P   A  + +    ++CG   +  +T  G +YT G+  +G+LG+    +  +      L
Sbjct: 519 LPTCVAQLVDHDFVQVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQAKDKSIAIVGGKL 578

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               V+ +S G  H   +  KG ++Y +G G  G+LGLG+T  + +P
Sbjct: 579 KDEFVKEISSGSYHVAALTSKG-SLYTWGMGANGQLGLGDTEDRNSP 624



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + + +IS+G +H   V+  G+VF WG  S   LG    ++   P++V +L+   ++ VS 
Sbjct: 307 LDVREISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLTGVLVKSVSC 366

Query: 75  GRSHSAAWT 83
           G   + A T
Sbjct: 367 GEYQTCALT 375


>gi|410976652|ref|XP_003994731.1| PREDICTED: probable E3 ubiquitin-protein ligase HECTD4 [Felis catus]
          Length = 4282

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 27/222 (12%)

Query: 215  FAQISRQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSG 267
            F Q +RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S 
Sbjct: 3893 FCQAARQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSS 3952

Query: 268  AVPLLVRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326
            ++ LL+  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L
Sbjct: 3953 SLSLLLLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDL 4008

Query: 327  SPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII---------- 375
             P  WK +V EP+    DL++ D L    ++    I+     EA   EI           
Sbjct: 4009 LPSFWKTLVGEPLDPDQDLQEADILTYNYVKKFESINDETELEALCAEIASQHLATESPE 4068

Query: 376  -PLEC--FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             P  C  F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 4069 GPKPCCRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 4109


>gi|410924085|ref|XP_003975512.1| PREDICTED: E3 ubiquitin-protein ligase HECTD3-like [Takifugu
           rubripes]
          Length = 851

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 109/254 (42%), Gaps = 35/254 (13%)

Query: 168 RPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTV-KPIFAQISRQVVKMK 226
           +P F PR+Y       + + + +     PS     L    K  V   +F  +       K
Sbjct: 459 KPDFMPRLY-------INRRLAMEHRDNPS-----LDPSCKNAVFSQVFEGLKPSDKFEK 506

Query: 227 GSDLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPN 277
             D R P+R    W+ K + EG  D GG F D++ +M  EL   +      +P   RT N
Sbjct: 507 TLDYRWPARYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSAECAMPLPFFCRTSN 566

Query: 278 GVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQE 337
             A     RD Y+ NP    S +    F+++G L G A+R K  L L L  LVWK +  E
Sbjct: 567 QGAFEA--RDYYVPNP----SCKEFHKFEWIGQLMGAALRGKDFLVLALPGLVWKQLTGE 620

Query: 338 PVTFT-DLEDNDTLYAQSLRAIRDIHLSGVT-EANFPEIIPLECFEGASWTGRITPIVTG 395
            V +  D    D++    L A+   H+   T E  F E +    +      G++  ++ G
Sbjct: 621 AVHWNKDFPAVDSVLVNFLEAME--HMDKETFEFRFGEDL---VYTTLLSDGQMVELIPG 675

Query: 396 GQSVPLTFANRLQY 409
           G ++ + + +R ++
Sbjct: 676 GSNISVCYEDRSKF 689


>gi|145495055|ref|XP_001433521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400639|emb|CAK66124.1| unnamed protein product [Paramecium tetraurelia]
          Length = 447

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A +A G  H   + + G LY++G G  G+LGHGT+ +   P ++ +L+ +    V+CG  
Sbjct: 239 AKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGTSNDCSKPNQISSLSSIR--DVACGEA 296

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           H++ + + G +VY FG G++G+LGLG+   +  PQ
Sbjct: 297 HSMALQNNG-SVYVFGSGQFGQLGLGDYKQQDAPQ 330



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 7/94 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  HS  + +NG +Y FG+G +G+LG G       P+ +    ++H E ++CG +H+
Sbjct: 291 VACGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDAPQML----QIHGEMIACGRHHS 346

Query: 474 VCIADKGKAVYAFGDGEYGKLGL--GNTGLKPTP 505
             +   G A++ FG+ E  +LGL  G +G   TP
Sbjct: 347 AVLTKNG-ALFMFGNNESSQLGLECGKSGAYSTP 379



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I +  N+ I  +++GT HVLA+   G +++WG     QLG G   +  +P  + +LS  +
Sbjct: 230 ITSLGNLKIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGTSNDCSKPNQISSLS--S 287

Query: 69  IRQVSAGRSHSAA 81
           IR V+ G +HS A
Sbjct: 288 IRDVACGEAHSMA 300



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLG 442
           LQ +   IACG  HSAV+T NG L+ FGN +  +LG
Sbjct: 332 LQIHGEMIACGRHHSAVLTKNGALFMFGNNESSQLG 367



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I D++ G  H +A+ N G V+ +G+    QLGLG+      PQ++      +   ++ GR
Sbjct: 288 IRDVACGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDAPQML----QIHGEMIACGR 343

Query: 77  SHSAAWT 83
            HSA  T
Sbjct: 344 HHSAVLT 350


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V   +CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                    +Y+FG G  G+LG G+T  + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+  V  +G +YT G  D G+LGH  +   K PE+VVAL+  ++ +V+CG  HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHT 96

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + + DKG+ VYA+G    G+LGL
Sbjct: 97  LALNDKGQ-VYAWGLDSDGQLGL 118



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A+ACG  H+  +   G +Y +G    G+LG  G+    +VP  + +L+ + +  V+CG  
Sbjct: 88  AVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYY 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
           H++ ++ K   V+ +G  +YG+LGLG    K T PQ
Sbjct: 148 HSLALS-KASEVFCWGQNKYGQLGLGIDCQKQTSPQ 182



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
             + A    +IV ++ G  H LA+++ GQV+AWG +SD QLGL G++   R P+ + +LS
Sbjct: 76  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 66  NKNIRQVSAGRSHSAA 81
           +  I QV+ G  HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
           R+I +  +I IV ++ G  H LA+S   +VF WG N   QLGLG     +  PQL+ +L 
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                QV+AG +HS   T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  HS V+T +G ++ +G   +G+LG     +  VP  + +L    +  + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 4   TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
           TS + I +   I  + ++ G  H   ++ +G +F WG N   QLGL ++ +   P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L ++ I  +  G  H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG+ HS  ++    ++ +G   YG+LG G     +  P+ + +L  +    V+ G  H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  +   G A++ +G  ++G+LGL +   +  P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F N  + D+  G  H + V + G V+  G N   QLG  ++ + ++P+ V+AL  
Sbjct: 26 RRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  V+ G +H+ A
Sbjct: 84 QNIVAVACGEAHTLA 98



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++  + R++P    + ++  IV I  G +H  A++  G VF +G     QLG  +  +  
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
            P+ V  L    + Q + GR H++A+ 
Sbjct: 284 NPRKVFELMGSIVTQAACGRQHTSAFV 310



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           +  +GN  YG+LG G      V  P R        V  V CGL HTV + D G  VY  G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59

Query: 488 DGEYGKLGLGNTGLKP 503
             + G+LG   +  KP
Sbjct: 60  CNDLGQLGHEKSRKKP 75


>gi|156368637|ref|XP_001627799.1| predicted protein [Nematostella vectensis]
 gi|156214719|gb|EDO35699.1| predicted protein [Nematostella vectensis]
          Length = 626

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLN 471
           +ACG + +A +T +G LYTFG+  +G +G    ++ +V  P +V   N   VE +SCG  
Sbjct: 392 VACGDEFTACITDDGALYTFGSDYFGCIGCSNELDEEVLLPHKVTFFNDKPVEDISCGDC 451

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           H V +    KA+Y++G GE+G+LGLG+      PQ
Sbjct: 452 HVVVMC-ANKAIYSWGCGEHGRLGLGSEDDFAFPQ 485



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 414 IACGFKHSAVVTSNGYLYTFGN-----GDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
           +A G  H A+VT    ++T+ N     G  G+LGHG    ++ P+RV AL  + ++ V+C
Sbjct: 335 VAAGHSHFAIVTVEKEMFTWANAHGGKGMSGQLGHGDVACYRNPKRVDALFGIPIKKVAC 394

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           G   T CI D G A+Y FG   +G +G  N
Sbjct: 395 GDEFTACITDDG-ALYTFGSDYFGCIGCSN 423



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H  V+ +N  +Y++G G++GRLG G+  ++  P+++       V+ + CG   T
Sbjct: 446 ISCGDCHVVVMCANKAIYSWGCGEHGRLGLGSEDDFAFPQKIPLPTSCKVKRIYCGPEST 505

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
             +   G+ V A G+ +  +LGL
Sbjct: 506 FLLTVTGR-VLACGNNDENQLGL 527



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 12/86 (13%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE--------- 57
           + IP   +  +  I  G E    ++ TG+V A GNN + QLGL    + R+         
Sbjct: 485 QKIPLPTSCKVKRIYCGPESTFLLTVTGRVLACGNNDENQLGLDTLHSLRKRSIKGHVPS 544

Query: 58  ---PQLVLALSNKNIRQVSAGRSHSA 80
              P+LV +L+   I  V+ G++HSA
Sbjct: 545 ANSPKLVQSLNRYTIAIVAPGKTHSA 570


>gi|428176135|gb|EKX45021.1| hypothetical protein GUITHDRAFT_71654 [Guillardia theta CCMP2712]
          Length = 364

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 51/82 (62%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACGF H+A +TS+G ++  G GD G+LG G+  N  VP  V+ + + HV S+ CG +HT
Sbjct: 190 LACGFSHTAFLTSSGRVFCSGQGDSGQLGIGSKSNSLVPALVLGIERAHVGSLVCGHSHT 249

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
           + +    +  +++G    G+LG
Sbjct: 250 MVVDANAQMAFSWGSNATGELG 271



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           +ACG +H+ V+ S+G L+ +G  + G+L  G+     +P RV      +  V  ++CG +
Sbjct: 136 VACGGQHAVVMLSDGSLFAWGRNEEGQLAIGSLEPKLIPSRVETPWRGEERVVQLACGFS 195

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
           HT  +   G+ V+  G G+ G+LG+G+
Sbjct: 196 HTAFLTSSGR-VFCSGQGDSGQLGIGS 221



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 2/94 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLN 471
           ++ACG  H+ + T  G +++FG   YG+LG G   +  + P+ + +L    ++ V+CG  
Sbjct: 82  SLACGRAHAVLTTEEGDVWSFGWNMYGQLGLGLQYDHTRTPQLLESLRGPKLQDVACGGQ 141

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           H V +   G +++A+G  E G+L +G+   K  P
Sbjct: 142 HAVVMLSDG-SLFAWGRNEEGQLAIGSLEPKLIP 174



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 35/63 (55%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V ++ G  H   ++++G+VF  G     QLG+G++ N   P LVL +   ++  +  G 
Sbjct: 187 VVQLACGFSHTAFLTSSGRVFCSGQGDSGQLGIGSKSNSLVPALVLGIERAHVGSLVCGH 246

Query: 77  SHS 79
           SH+
Sbjct: 247 SHT 249



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 10/82 (12%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA----- 63
           + + +   + D++ G +H + + + G +FAWG N + QL +G+     EP+L+ +     
Sbjct: 125 LESLRGPKLQDVACGGQHAVVMLSDGSLFAWGRNEEGQLAIGSL----EPKLIPSRVETP 180

Query: 64  -LSNKNIRQVSAGRSHSAAWTA 84
               + + Q++ G SH+A  T+
Sbjct: 181 WRGEERVVQLACGFSHTAFLTS 202


>gi|126328935|ref|XP_001376745.1| PREDICTED: protein RCC2 [Monodelphis domestica]
          Length = 439

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 58/87 (66%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           HS ++T+ G L+++G  + G+LGHG T   + P+ +  L+K  + S +CG NHT+ + + 
Sbjct: 77  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 136

Query: 480 GKAVYAFGDGEYGKLGLGN-TGLKPTP 505
           G +V+AFG+ + G+LGLGN T   P+P
Sbjct: 137 G-SVFAFGENKMGQLGLGNQTDAIPSP 162



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 25/106 (23%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW------------KVPERVVALNK- 460
           +ACG + S ++   G LY+FG  +YG+LGH +   +             VP RV    + 
Sbjct: 175 MACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEK 234

Query: 461 -----------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
                      V V  V+CG NHT+ + D  K V+++G G YG+LG
Sbjct: 235 TKDGQILPVPNVVVRDVACGTNHTL-VLDSQKRVFSWGFGGYGRLG 279



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           + ACG  H+  +T  G ++ FG    G+LG G   +       +  N   +  ++CG   
Sbjct: 122 SAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQPITKMACGAEF 181

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           ++ +  KG  +Y+FG  EYG+LG  + G
Sbjct: 182 SMIMDCKGN-LYSFGCPEYGQLGHNSDG 208



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
           H L ++  G++++WG N   QLG G+      P+L+  LS + I   + GR+H+ A T
Sbjct: 77  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALT 134



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 25/38 (65%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN 54
           IV  + G  H LA++ TG VFA+G N   QLGLGNQ +
Sbjct: 120 IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 157



 Score = 38.9 bits (89), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +ACG  H+ V+ S   ++++G G YGRLGH    +  VP R+V L
Sbjct: 251 VACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP-RLVKL 294


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 182 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 241

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 242 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 300

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 301 NQSYPTP 307



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 162 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 220

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 221 CCMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 253



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 202 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 261

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 262 IRVQRVACGYAHTLVLT 278



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 245 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 304

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V    ++ I   +   +H++A
Sbjct: 305 PTPVTVEKDRIIEIAACHSTHTSA 328



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 247 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 306

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP ++   L+   V  V+CG  H++ +  
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTS 174

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 175 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 201



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L NK + 
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 213

Query: 71  QVSAGR 76
            ++ G+
Sbjct: 214 TIACGQ 219



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P Q+   L
Sbjct: 95  RRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNL 154

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 155 SNKQVIEVACGSYHSLVLTS 174


>gi|340379685|ref|XP_003388357.1| PREDICTED: hypothetical protein LOC100636752 [Amphimedon
            queenslandica]
          Length = 1500

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 11/131 (8%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE---PQLVLALSNKNIRQVS 73
            +VD++   +++L V++TG V++WG N+   + LG +I       P+L+  +S K I+QVS
Sbjct: 1320 VVDVAFADQYILCVTSTGNVYSWGKNTGYTIQLGYEIESPSQVVPKLINVISGKGIKQVS 1379

Query: 74   AGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRF 133
            AG  H+   T PP   +        S  + +P +IP  Y  L   PL  I  RL+ L+  
Sbjct: 1380 AGVRHALCCTMPPPTRY--------STVMSVPTEIPLDYTSLTGIPLTSIYGRLQTLSLL 1431

Query: 134  SDLIYQVVRLL 144
            S  I    RL 
Sbjct: 1432 SRRIMSSWRLF 1442



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 10/94 (10%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA---------LNKVHVE 464
            I+CG  H A V+  G LYTFGN   GRLG G       P  V           ++ V + 
Sbjct: 1160 ISCGDSHCAAVSVTGTLYTFGNSAGGRLGRGEDAA-PAPTEVTTFLGDNQRDEIHGVKIG 1218

Query: 465  SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
             VSCG ++T+ I   G+ V+ FG G     GL +
Sbjct: 1219 HVSCGNSYTIAITQDGRQVFGFGKGANSCFGLSS 1252



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 8/86 (9%)

Query: 4    TSGRHIPAFKNIHIVDISVG----TE----HVLAVSNTGQVFAWGNNSDAQLGLGNQINY 55
            TS R I AF    IV +  G    TE      LA++  G+V++WG  S  +LG  N  N 
Sbjct: 1084 TSIRQIGAFTGTKIVQLVAGPRTATETDEGFALALTEEGEVYSWGRGSKHRLGHSNTDNV 1143

Query: 56   REPQLVLALSNKNIRQVSAGRSHSAA 81
            + P+L+  L  KNI+ +S G SH AA
Sbjct: 1144 KSPKLIEGLVGKNIKMISCGDSHCAA 1169



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 423  VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKA 482
             +T  G +Y++G G   RLGH  T N K P+ +  L   +++ +SCG +H   ++  G  
Sbjct: 1117 ALTEEGEVYSWGRGSKHRLGHSNTDNVKSPKLIEGLVGKNIKMISCGDSHCAAVSVTG-T 1175

Query: 483  VYAFGDGEYGKLGLG 497
            +Y FG+   G+LG G
Sbjct: 1176 LYTFGNSAGGRLGRG 1190


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)

Query: 214 IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLV 273
           I A   R++     SDL+ P R   VK  GE A+DAGGV  +    +  E+L     +  
Sbjct: 750 IVADTLRELGHYNSSDLKKPLR---VKFHGEEAEDAGGVKKEFFMLLLREILDPKYGMFK 806

Query: 274 RTPNGVADTGYNRDRYI-LNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWK 332
           +         Y   R I  N D  E  +  M+F  +GIL G+ I     + LP    ++K
Sbjct: 807 Q---------YEETRVIWFNEDSFEDEK--MYF-LIGILCGLVIYNFIIIDLPFPLALYK 854

Query: 333 LIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPL--ECFEGASWTGRIT 390
            +++EPV   D++D   ++A+S++ I D       EA+F E+  L  E         +I 
Sbjct: 855 KLLREPVALNDIKDMSPVFAKSMQNILDYE-----EADFEEVFGLHFEVVREVFGEKKIY 909

Query: 391 PIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNG 436
            +   G  VP+T  N+ Q+ +  +      S       + Y F  G
Sbjct: 910 ELTPNGSKVPVTLKNKKQFVDLYVDYTLNKSV----ENHFYAFNQG 951



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 54/92 (58%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           ACG + S  +T +G ++T G G YG+LGHG+  N  +P +V+ L    V  +SCG  HT+
Sbjct: 280 ACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTL 339

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +      VYA+G G  G+LG  +T   PTPQ
Sbjct: 340 ALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQ 371



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 2/94 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
           +ACG KH+  +T+NG LY++G+   G+LG G  +  +V P+ +  L  V +  ++CG  H
Sbjct: 174 VACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYH 233

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           ++ I+  G A++ +G   +G+LGL +T  +  P 
Sbjct: 234 SIAISKSG-AIFGWGKNTFGQLGLNDTQNRNLPH 266



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 3/88 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  ++ V+T +G +Y+ GN DYG+LGH      K  + ++ L+    + V+CG  HT
Sbjct: 71  IACGENYTVVITHDGKIYSCGNNDYGQLGH--ERGRKRLQLILGLDAFVFKKVACGAYHT 128

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGL 501
           + + + G+ ++++G    G+LGL +   
Sbjct: 129 IAVNEWGQ-LFSWGSNSEGQLGLNSKNF 155



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A IACG  HS  ++ +G ++ +G   +G+LG   T N  +P ++  L    +   +CG  
Sbjct: 225 AFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEE 284

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +V +   G  V+  G G YG+LG G+   +  P+
Sbjct: 285 FSVFLTVDG-GVFTCGAGMYGQLGHGSNNNEILPR 318



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALSNKNIRQVSAG 75
           IV ++ G +H LA++N G++++WG+NS+ QLGLG  I    +P+L+  L+   I  ++ G
Sbjct: 171 IVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACG 230

Query: 76  RSHSAA 81
             HS A
Sbjct: 231 GYHSIA 236



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 3/66 (4%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE--PQLVLALSNKNIRQVSAGRS 77
           ++ G  H +AV+  GQ+F+WG+NS+ QLGL N  N+ E  P++V  L    I QV+ G  
Sbjct: 121 VACGAYHTIAVNEWGQLFSWGSNSEGQLGL-NSKNFMECSPRMVKTLGTSIIVQVACGMK 179

Query: 78  HSAAWT 83
           H+ A T
Sbjct: 180 HALALT 185



 Score = 45.1 bits (105), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I     + I  I+ G  H +A+S +G +F WG N+  QLGL +  N   P  +  L N  
Sbjct: 216 INTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAK 275

Query: 69  IRQVSAGRSHSAAWTA 84
           I   + G   S   T 
Sbjct: 276 ICYAACGEEFSVFLTV 291



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 3/97 (3%)

Query: 401 LTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN--WKVPERVVAL 458
           LT AN  +    A     K    +   G ++ +GN  +G LG G   +    VP +V   
Sbjct: 4   LTTANWNKKRRMACEPVIKGQKSLLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFK 63

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               ++ ++CG N+TV I   GK +Y+ G+ +YG+LG
Sbjct: 64  KASEIQQIACGENYTVVITHDGK-IYSCGNNDYGQLG 99



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 1   MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           ++ T  R++P      +N  I   + G E  + ++  G VF  G     QLG G+  N  
Sbjct: 256 LNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEI 315

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAA 81
            P+ V+ L    + Q+S G+ H+ A
Sbjct: 316 LPRQVMELMGSTVTQISCGKRHTLA 340


>gi|52078426|gb|AAH82276.1| Hectd3 protein, partial [Mus musculus]
          Length = 364

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 20/192 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 20  DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 79

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 80  NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 135

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + GV +  F      E  F       ++  ++ GG 
Sbjct: 136 SWSKDFPAVDSVLVKLLEV-----MEGVDKETFEFKFGKELTFTTVLSDQQVVELIPGGT 190

Query: 398 SVPLTFANRLQY 409
            + + + +R ++
Sbjct: 191 GIVVEYEDRSRF 202


>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
          Length = 551

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      I+CG   S  V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ +YA+G   YG+LG GN  
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-IYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T N  +P RV     NKV V ++SCG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNISCGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            ++ + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 216 CSMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 248



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 47/106 (44%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G +  G++    +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+L
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL 289

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G G   N   P  VV      +E  +C   HT     +G  VY +G
Sbjct: 290 GTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQ++AWG NS  QLG GN+ N   
Sbjct: 240 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY 299

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V+   ++ I   +   +H++A
Sbjct: 300 PTPVVVEKDRIIEIAACHSAHTSA 323



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +++IS G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T++G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQPIPR 196



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+  N   P+ V   L 
Sbjct: 144 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQ 203

Query: 66  NKNIRQVSAGRSHSAA 81
           NK +  +S G+  S A
Sbjct: 204 NKVVMNISCGQMCSMA 219



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IACG +HS   TS G ++ +G G YG LG G   +  +P +V  L  V V SV+CG  H
Sbjct: 175 SIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRH 234

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           ++  AD+  AVY FG  +YG+LG G+
Sbjct: 235 SIA-ADETGAVYTFGWSKYGQLGHGD 259



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG++HS      G +YTFG   YG+LGHG  ++  VP+ V +L    +  ++ G  H
Sbjct: 227 SVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRH 286

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           T    D GK +Y++G  ++G+LG+G+
Sbjct: 287 TSAADDSGK-LYSWGWNKFGQLGIGS 311



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 2/108 (1%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTS-NGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           P    + +Q   +A+  G ++S  ++     +Y++G GD+GRLGHG   +  +P+ + AL
Sbjct: 57  PRAIFHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRAL 116

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              ++  V+CG  HT+ + D G+ +++FG  + G+LGLG T     PQ
Sbjct: 117 AGRNIVKVACGDTHTLAVTDTGE-LFSFGRNQNGQLGLGTTSDAILPQ 163



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +++CG  HS  + SNG   ++G G+ G+LGHG     K P  +  L +    +V  G  +
Sbjct: 18  SVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEY 77

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +V ++     VY++G G++G+LG G+      PQ
Sbjct: 78  SVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQ 111



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G++H++    +G LY++G   +G+LG G+  +   P  V  LN   V+ +SCG  HT
Sbjct: 280 IAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHT 339

Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
             + + G  V+++G G  G+LG
Sbjct: 340 FAVTEAGD-VFSWGRGVNGQLG 360



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 45/76 (59%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I A    +IV ++ G  H LAV++TG++F++G N + QLGLG   +   PQ V +L  + 
Sbjct: 113 IRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQE 172

Query: 69  IRQVSAGRSHSAAWTA 84
           +  ++ G  HS A T+
Sbjct: 173 VTSIACGGEHSLAATS 188



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 38/75 (50%)

Query: 11 AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
          A  ++ +  +S G+ H LA+ + G   +WG   D QLG G+    ++P+ +  L   +  
Sbjct: 10 AVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCS 69

Query: 71 QVSAGRSHSAAWTAP 85
           V +G  +S A + P
Sbjct: 70 AVCSGAEYSVALSQP 84



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + + + K+  IV I+ G  H  A  ++G++++WG N   QLG+G+  +   P  V  L+ 
Sbjct: 267 KAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVPVQGLNT 326

Query: 67  KNIRQVSAGRSHSAAWT 83
             ++ +S G  H+ A T
Sbjct: 327 SPVKLLSCGWRHTFAVT 343



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 34/73 (46%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + +   +  I+ G EH LA ++ G VFAWG      LG+G   +   P  V  L    
Sbjct: 165 VESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVK 224

Query: 69  IRQVSAGRSHSAA 81
           +  V+ G  HS A
Sbjct: 225 VTSVACGWRHSIA 237



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 7   RHIPA----FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           RH+P+     + + +  ++ G  H +A   TG V+ +G +   QLG G+ I+   P+ V 
Sbjct: 211 RHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVE 270

Query: 63  ALSNKNIRQVSAGRSHSAA 81
           +L +  I  ++ G  H++A
Sbjct: 271 SLKDSRIVLIAGGWRHTSA 289


>gi|26332130|dbj|BAC29795.1| unnamed protein product [Mus musculus]
          Length = 827

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 35/337 (10%)

Query: 105 PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
           P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 326 PADAADPRMACLSNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTPMYAHSIAALL 383

Query: 164 HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
             +   +F     T+ + R +  T+     +  P +T+  L     + + +    F Q +
Sbjct: 384 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLEIVGGEIRASENSYFCQAA 442

Query: 220 RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
           RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 443 RQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 502

Query: 273 VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
           +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L P  W
Sbjct: 503 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDLLPSFW 558

Query: 332 KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII-----------PLEC 379
           K +V EP+    DL++ D L    ++    I+     EA   EI            P  C
Sbjct: 559 KTLVGEPLDPDQDLQEADILTYNYVKKFESINDESELEALCAEIASQHLATESPEGPKPC 618

Query: 380 --FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 619 CRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 654


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  VT  G LYT+G+G +  G LGHG+ ++  +P+R+   L  +HV SV+CG 
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGP 398

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   G+ ++ FGDG +G LG G+
Sbjct: 399 WHTALITSYGR-LFTFGDGTFGVLGHGD 425



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 16/121 (13%)

Query: 399 VPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P   A  L+  + A++ CG  H+A++TS G L+TFG+G +G LGHG     + P  V +
Sbjct: 378 IPKRIAGCLEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVES 437

Query: 458 LNKVHVESVSCGLNHTVCIAD------------KGKAVYAFGDGEYGKLGLGNTG--LKP 503
           L+ +   +VSCG+ HT  + +             GK ++ +GDG+  +LG G+    LKP
Sbjct: 438 LSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGK-LFTWGDGDKNRLGHGDKDPRLKP 496

Query: 504 T 504
           T
Sbjct: 497 T 497



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 2/97 (2%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRL-QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G++  G++  + T G+ +P    ++L   +   I+CG  H A +TS   +YT+G G  GR
Sbjct: 530 GSTVYGQLGNLQTDGK-LPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGR 588

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           LGHG   + KVP  V AL   HV+ ++CG N+T  I 
Sbjct: 589 LGHGDLEDRKVPTLVEALKDRHVKYIACGSNYTAAIC 625



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV-HVESVSCGLNH 472
           IACG +H+A VT  G ++T+G    GRLGHG   +   P  V +L     V+ V+CG  H
Sbjct: 286 IACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFH 345

Query: 473 TVCIADKGKAVYAFGDGEY--GKLGLGN 498
           T  +   G+ +Y +GDG +  G LG G+
Sbjct: 346 TCAVTLAGE-LYTWGDGTHNVGLLGHGS 372



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVES 465
           + Y    IACG   +  +T++G ++T G+  YG+LG+  T + K+P  V   L    VE 
Sbjct: 503 IDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEE 561

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +SCG  H   +  + + VY +G G  G+LG G+   +  P
Sbjct: 562 ISCGAYHVAALTSRNE-VYTWGKGANGRLGHGDLEDRKVP 600



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 43/65 (66%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +IS G  HV A+++  +V+ WG  ++ +LG G+  + + P LV AL +++++ ++ G 
Sbjct: 559 VEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIACGS 618

Query: 77  SHSAA 81
           +++AA
Sbjct: 619 NYTAA 623



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 13/95 (13%)

Query: 413 AIACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           A++CG  H+A V              +G L+T+G+GD  RLGHG       P  V AL  
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 504

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
            +   ++CG + TV +   G+ V+  G   YG+LG
Sbjct: 505 YNFHKIACGHSLTVGLTTSGQ-VFTMGSTVYGQLG 538



 Score = 38.9 bits (89), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS-NKNIRQVS 73
           + +  I+ G  H   V+  G++F WG  S  +LG G   +   P+LV +L+   ++  V+
Sbjct: 281 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVA 340

Query: 74  AGRSHSAAWT 83
            G  H+ A T
Sbjct: 341 CGEFHTCAVT 350


>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 3/95 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G+ HS  V+  G L+T G+G +G+LGHG   +   P +V   +  HV+ ++CG+ H+
Sbjct: 105 VSAGWSHSGFVSDTGCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHS 164

Query: 474 VCIADKGKAVYAFGDGEYGKLG--LGNTGLKPTPQ 506
           + +  KG  VY FG G+ G+LG  + NT     PQ
Sbjct: 165 LVLL-KGDQVYGFGSGKRGQLGVSMDNTRSISVPQ 198



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H   +T++G + T+G G  G+LGHG  ++   P+ V  L    +  VS G +H+
Sbjct: 53  LACGGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHS 112

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             ++D G  ++  GDG +G+LG G+     +P
Sbjct: 113 GFVSDTG-CLFTCGDGSFGQLGHGDCKSHCSP 143



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           ++ G  HVLA++  G+V  WG  +  QLG G+ ++  +P+ V  L +  +  VSAG SHS
Sbjct: 53  LACGGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHS 112

Query: 80  A 80
            
Sbjct: 113 G 113



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           +H+   ++  +  +S G  H   VS+TG +F  G+ S  QLG G+  ++  P  V    +
Sbjct: 92  KHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDS 151

Query: 67  KNIRQVSAGRSHS 79
           K++ Q++ G  HS
Sbjct: 152 KHVDQIACGMRHS 164



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 20/112 (17%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG------------------HGTTMNWKVP-ER 454
           +A G+ H  V+T  G ++  G   +G LG                  HG   + +   E+
Sbjct: 255 VALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLSVIEVFLHGPEESREENLEK 314

Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           V  L+ ++V  ++ G  H+  + +  + +  +G GE+G+LGLGNT  + +PQ
Sbjct: 315 VQGLDGLNVVQIAAGAEHSALVTEN-RVIKTWGWGEHGQLGLGNTYDQISPQ 365



 Score = 38.5 bits (88), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG--LGNQINYREPQLVLALSN 66
           +  F + H+  I+ G  H L +    QV+ +G+    QLG  + N  +   PQ  + L  
Sbjct: 146 VSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRGQLGVSMDNTRSISVPQATVGLEG 205

Query: 67  KNIRQVSAGRSHSAAWTA 84
             I  + A   HSAA +A
Sbjct: 206 VEIISIDANGDHSAALSA 223


>gi|37360008|dbj|BAC97982.1| mKIAA0614 protein [Mus musculus]
          Length = 1159

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 35/337 (10%)

Query: 105 PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
           P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 658 PADAADPRMACLSNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTPMYAHSIAALL 715

Query: 164 HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
             +   +F     T+ + R +  T+     +  P +T+  L     + + +    F Q +
Sbjct: 716 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLEIVGGEIRASENSYFCQAA 774

Query: 220 RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
           RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 775 RQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 834

Query: 273 VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
           +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L P  W
Sbjct: 835 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDLLPSFW 890

Query: 332 KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII-----------PLEC 379
           K +V EP+    DL++ D L    ++    I+     EA   EI            P  C
Sbjct: 891 KTLVGEPLDPDQDLQEADILTYNYVKKFESINDESELEALCAEIASQHLATESPEGPKPC 950

Query: 380 --FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 951 CRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 986


>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
           gallopavo]
          Length = 537

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 2/125 (1%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G +  G++    T  Q  P   +N LQ      IACG   S  V +NG +Y +G    G+
Sbjct: 159 GYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQ 218

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G   N   P RV AL+ V +  ++CG  HT+ + D+G  +YA+G   YG+LG GN  
Sbjct: 219 LGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEG-LLYAWGANTYGQLGTGNKS 277

Query: 501 LKPTP 505
            + +P
Sbjct: 278 NQLSP 282



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG  HS  ++ +G LY +G  + G++G G+T N   P RV   L    V  ++CG   
Sbjct: 139 VACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTS 198

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ + + G+ VY +G    G+LGLGN G + TP
Sbjct: 199 SMAVVNNGE-VYGWGYNGNGQLGLGNNGNQLTP 230



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 39/71 (54%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V I+ G    +AV N G+V+ WG N + QLGLGN  N   P  V AL    I Q++ G 
Sbjct: 189 VVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGY 248

Query: 77  SHSAAWTAPPL 87
           +H+ A T   L
Sbjct: 249 AHTLALTDEGL 259



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A   + I+ I+ G  H LA+++ G ++AWG N+  QLG GN+ N   P  ++    + 
Sbjct: 233 VAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERV 292

Query: 69  IRQVSAGRSHSAA 81
           +   +   +H++A
Sbjct: 293 VEIAACHSAHTSA 305



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA---LNKVHVESVSCGLNHTVCI 476
           H  + T +G +Y +G+  Y +LG+G T     P +V     L KV +E V+CG +H++ +
Sbjct: 92  HVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKV-IE-VACGSHHSMAL 149

Query: 477 ADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  G  +YA+G    G++G G+T  +PTP+
Sbjct: 150 SFDGD-LYAWGYNNCGQVGSGSTANQPTPR 178



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG+ H+  +T  G LY +G   YG+LG G   N   P +++   +  VE  +C   HT
Sbjct: 244 IACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERVVEIAACHSAHT 303

Query: 474 VCIADKGKAVYAFG 487
                +   VY +G
Sbjct: 304 SAAKTQSGQVYMWG 317



 Score = 42.4 bits (98), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIRQVSAG 75
           +++++ G+ H +A+S  G ++AWG N+  Q+G G+  N   P+ V   L +K +  ++ G
Sbjct: 136 VIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACG 195

Query: 76  RSHSAA 81
           ++ S A
Sbjct: 196 QTSSMA 201



 Score = 38.5 bits (88), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           + + A     I  +S G+  HVL  +  G+V+AWG+N  +QLG G       P Q+   L
Sbjct: 72  KKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNL 131

Query: 65  SNKNIRQVSAGRSHSAA 81
             K + +V+ G  HS A
Sbjct: 132 LLKKVIEVACGSHHSMA 148



 Score = 38.5 bits (88), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 4/95 (4%)

Query: 415 ACGFKHSA----VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           AC F  SA      T N  ++ FG      LG G + +  VP+++ AL    + S+S G 
Sbjct: 30  ACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGS 89

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              V +  +   VYA+G   Y +LG G T    TP
Sbjct: 90  GPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTP 124


>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Callithrix jacchus]
          Length = 577

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N   P RV     NKV V +++CG  
Sbjct: 183 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKV-VVTIACGQM 241

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 242 CCMAVVDSGE-VYVWGYNGNGQLGLGNSGNQPTP 274



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG      V  +G +Y +G    G+LG G + N   P RV AL  + V+ V+CG  HT
Sbjct: 236 IACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHT 295

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLK--PTP 505
           + + D+G+ VYA+G   YG+LG GN   +  PTP
Sbjct: 296 LVLTDEGQ-VYAWGANSYGQLGTGNKSNQSYPTP 328



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV ++G+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 223 RVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 282

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 283 IRVQRVACGYAHTLVLT 299



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 277 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 336

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 337 IEIAACHSTHTSA 349



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 136 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 195

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +PTP+
Sbjct: 196 DGE-VFAWGYNNSGQVGSGSTVNQPTPR 222



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 268 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 327

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 328 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 361



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L 
Sbjct: 170 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQ 229

Query: 66  NKNIRQVSAGR 76
           NK +  ++ G+
Sbjct: 230 NKVVVTIACGQ 240



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 116 RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 175

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 176 SNKQVIEVACGSYHSLVLTS 195


>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Homo sapiens]
          Length = 310

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 216 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 248



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 386 TGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
           +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+LG G
Sbjct: 181 SGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG 240

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK-- 502
            + N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN   +  
Sbjct: 241 NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKSNQSY 299

Query: 503 PTP 505
           PTP
Sbjct: 300 PTP 302



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 196



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L 
Sbjct: 144 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQ 203

Query: 66  NKNIRQVSAGR 76
           NK +  ++ G+
Sbjct: 204 NKVVVTIACGQ 214



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP 58
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 90  RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG--LPQDIPDHY-GHLQNKPLP 121
           SNK + +V+ G  HS   T+        G+  S  +  G  + Q IP    G LQNK + 
Sbjct: 150 SNKQVIEVACGSYHSLVLTSDG-EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208

Query: 122 LI 123
            I
Sbjct: 209 TI 210


>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
          Length = 537

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 2/121 (1%)

Query: 386 TGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
            G++    T  Q  P   +N LQ      IACG   S  V +NG +Y +G    G+LG G
Sbjct: 163 CGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLG 222

Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
              N   P RV AL+ V +  ++CG  HT+ + D+G  +YA+G   YG+LG GN   + +
Sbjct: 223 NNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEG-LLYAWGANTYGQLGTGNKSNQLS 281

Query: 505 P 505
           P
Sbjct: 282 P 282



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG  HS  ++ +G LY +G  + G++G G+T N   P RV   L    V  ++CG   
Sbjct: 139 VACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTS 198

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           ++ + + G+ VY +G    G+LGLGN G + TP
Sbjct: 199 SMAVVNNGE-VYGWGYNGNGQLGLGNNGNQLTP 230



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 39/71 (54%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V I+ G    +AV N G+V+ WG N + QLGLGN  N   P  V AL    I Q++ G 
Sbjct: 189 VVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGY 248

Query: 77  SHSAAWTAPPL 87
           +H+ A T   L
Sbjct: 249 AHTLALTDEGL 259



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A   + I+ I+ G  H LA+++ G ++AWG N+  QLG GN+ N   P  ++    + 
Sbjct: 233 VAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERV 292

Query: 69  IRQVSAGRSHSAA 81
           +   +   +H++A
Sbjct: 293 VEIAACHSAHTSA 305



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA---LNKVHVESVSCGLNHTVCI 476
           H  + T +G +Y +G+  Y +LG+G T     P +V     L KV +E V+CG +H++ +
Sbjct: 92  HVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKV-IE-VACGSHHSMAL 149

Query: 477 ADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  G  +YA+G    G++G G+T  +PTP+
Sbjct: 150 SFDGD-LYAWGYNNCGQVGSGSTANQPTPR 178



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG+ H+  +T  G LY +G   YG+LG G   N   P +++   +  VE  +C   HT
Sbjct: 244 IACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERVVEIAACHSAHT 303

Query: 474 VCIADKGKAVYAFG 487
                +   VY +G
Sbjct: 304 SAAKTQSGQVYMWG 317



 Score = 42.4 bits (98), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIRQVSAG 75
           +++++ G+ H +A+S  G ++AWG N+  Q+G G+  N   P+ V   L +K +  ++ G
Sbjct: 136 VIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACG 195

Query: 76  RSHSAA 81
           ++ S A
Sbjct: 196 QTSSMA 201



 Score = 38.5 bits (88), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           + + A     I  +S G+  HVL  +  G+V+AWG+N  +QLG G       P Q+   L
Sbjct: 72  KKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNL 131

Query: 65  SNKNIRQVSAGRSHSAA 81
             K + +V+ G  HS A
Sbjct: 132 LLKKVIEVACGSHHSMA 148



 Score = 38.5 bits (88), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 4/95 (4%)

Query: 415 ACGFKHSA----VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
           AC F  SA      T N  ++ FG      LG G + +  VP+++ AL    + S+S G 
Sbjct: 30  ACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGS 89

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              V +  +   VYA+G   Y +LG G T    TP
Sbjct: 90  GPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTP 124


>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Callithrix jacchus]
          Length = 556

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N   P RV     NKV V +++CG  
Sbjct: 162 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKV-VVTIACGQM 220

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLGN+G +PTP
Sbjct: 221 CCMAVVDSGE-VYVWGYNGNGQLGLGNSGNQPTP 253



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG      V  +G +Y +G    G+LG G + N   P RV AL  + V+ V+CG  HT
Sbjct: 215 IACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHT 274

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLK--PTP 505
           + + D+G+ VYA+G   YG+LG GN   +  PTP
Sbjct: 275 LVLTDEGQ-VYAWGANSYGQLGTGNKSNQSYPTP 307



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV ++G+V+ WG N + QLGLGN  N   P  V AL  
Sbjct: 202 RVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 262 IRVQRVACGYAHTLVLT 278



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   P  V    ++ 
Sbjct: 256 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 315

Query: 69  IRQVSAGRSHSAA 81
           I   +   +H++A
Sbjct: 316 IEIAACHSTHTSA 328



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP  +   L+   V  V+CG  H++ +  
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 174

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +PTP+
Sbjct: 175 DGE-VFAWGYNNSGQVGSGSTVNQPTPR 201



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 247 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 306

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 8   HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
           HI     N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L 
Sbjct: 149 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQ 208

Query: 66  NKNIRQVSAGR 76
           NK +  ++ G+
Sbjct: 209 NKVVVTIACGQ 219



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P  +   L
Sbjct: 95  RRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 154

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 155 SNKQVIEVACGSYHSLVLTS 174


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 11/103 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IACG  HSA+ TSNG L+TFG+G +G LGHG   +   P+ V  L  +    V+CG+ H
Sbjct: 308 SIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEVQLLTGLKTIKVACGVWH 367

Query: 473 TVCIAD---------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           T  I +             ++ +GDG+  +LG GN  T L+PT
Sbjct: 368 TAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPT 410



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 43/71 (60%)

Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
           L  +   I+CG  H A++T+   +YT+G G  GRLGHG   + K P  VVAL   ++++V
Sbjct: 468 LGEFVEKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKDRNIKNV 527

Query: 467 SCGLNHTVCIA 477
           SCG N T CI 
Sbjct: 528 SCGSNFTSCIC 538



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVV----------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  H+A +          +S+  L+T+G+GD  RLGHG    +  P RV  L + + 
Sbjct: 361 VACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVAPLMEYNF 420

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             V CG N T+ +   G  V+  G  E+G+LG
Sbjct: 421 HQVECGHNMTIALTTSGH-VFTMGGTEHGQLG 451



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H++ ++ +  LYT+G+G +  G LGHG+  +  +P+ V   L  + V S++CG 
Sbjct: 254 VACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKMVNGPLEGLQVVSIACGT 313

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK ++ FGDG +G LG G+
Sbjct: 314 WHSALATSNGK-LFTFGDGAFGVLGHGD 340



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G  H A+ T  G+++T+G    GRLGHG   ++  P  V  L   + E V+CG  HT
Sbjct: 202 IATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSPVLVEFLEGNNFEFVACGEYHT 261

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLGN 498
             ++ K   +Y +GDG +  G LG G+
Sbjct: 262 SALS-KSFELYTWGDGTHNVGLLGHGS 287



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-AL 458
           P   A  ++Y    + CG   +  +T++G+++T G  ++G+LG+  ++  K+P  V   L
Sbjct: 409 PTRVAPLMEYNFHQVECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLG-KIPTLVQDKL 467

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               VE +SCG +H   + +K + +Y +G G  G+LG G+   + +P
Sbjct: 468 LGEFVEKISCGAHHVAILTNKSE-IYTWGMGANGRLGHGDVEDRKSP 513



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 40/65 (61%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +  IS G  HV  ++N  +++ WG  ++ +LG G+  + + P LV+AL ++NI+ VS G 
Sbjct: 472 VEKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKDRNIKNVSCGS 531

Query: 77  SHSAA 81
           + ++ 
Sbjct: 532 NFTSC 536



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 32/67 (47%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G  H+   +  G VF WG  S  +LG G   ++  P LV  L   N   V+ 
Sbjct: 197 LDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSPVLVEFLEGNNFEFVAC 256

Query: 75  GRSHSAA 81
           G  H++A
Sbjct: 257 GEYHTSA 263


>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
          Length = 620

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT-TMNWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT T     P+ + ++    +  V CG NH
Sbjct: 243 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENH 301

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I + G  +Y FGDG +GKLGLG
Sbjct: 302 TALITESG-LLYTFGDGRHGKLGLG 325



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +++CG +H+A+ T N  L+ FG+ ++G+LG G+      P  + AL    V+ V+CG NH
Sbjct: 84  SLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNH 143

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
           T+ +   G+ VYA G    G+LGLG+T
Sbjct: 144 TLILTGGGQ-VYATGGNNEGQLGLGDT 169



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 5/92 (5%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM--NWKVPERVVALNKVHVES 465
           Q+    ++ G   SA +T+ G LYTFG  + G+LG    +  N KVP+ V  +++  ++ 
Sbjct: 184 QHKIKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQ- 242

Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
           V+CG  HTV + +  KAVY FG G++G+LGLG
Sbjct: 243 VACGGGHTVVLTE--KAVYTFGLGQFGQLGLG 272



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
           + CG  H+A++T +G LYTFG+G +G+LG G     N  VP    +  K  V  V+CG  
Sbjct: 295 VCCGENHTALITESGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFLKYIVHLVACGGC 354

Query: 472 HTVCIA 477
           H +  A
Sbjct: 355 HMLVFA 360



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           I A K   +  ++ G  H L ++  GQV+A G N++ QLGLG+        L+    S  
Sbjct: 126 IKALKPEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQH 185

Query: 68  NIRQVSAGRSHSAAWTA 84
            I+Q+SAG + SAA TA
Sbjct: 186 KIKQLSAGSNTSAALTA 202



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           FK    + +S G EH    +   ++F +G+N+  QLGLG++    +P  + AL  + ++ 
Sbjct: 77  FKRDIPISLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKF 136

Query: 72  VSAGRSHSAAWTA 84
           V+ GR+H+   T 
Sbjct: 137 VACGRNHTLILTG 149


>gi|355694474|gb|AER99681.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 306

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   IV ++VG  H LAV++ GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 133 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 192

Query: 69  IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
           I +V+ G SHS AWT   +     H P        P  +  LG+P D
Sbjct: 193 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 239



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG + S  +T +G ++T+G GDY RLGHG+ ++ + P+ V  L    +  V+ G  H 
Sbjct: 92  IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 151

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 152 LAVTDAGQ-VYAWGDNDHGQQGNGTTTVNRKP 182



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 414 IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +ACG +   +  +T  G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG  
Sbjct: 38  VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 97

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
            ++ +   G  V+ +G G+Y +LG G+
Sbjct: 98  FSLALTKSG-VVWTWGKGDYFRLGHGS 123



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 3/79 (3%)

Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFG 487
           LYT+G G+YGRLGHG       P+ V  L    V  V+CG     T+ + D+G  V+++G
Sbjct: 2   LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWG 60

Query: 488 DGEYGKLGLGNTGLKPTPQ 506
           DG++GKLG G +     PQ
Sbjct: 61  DGDFGKLGRGGSEGCNIPQ 79



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3   GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           G+ G +IP  +NI       +  I  G +  LA++ +G V+ WG     +LG G+ ++ R
Sbjct: 71  GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 128

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAAWT 83
           +PQ+V  L  K I  V+ G  H  A T
Sbjct: 129 KPQVVEGLRGKKIVHVAVGALHCLAVT 155



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  H   VT  G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 144 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 203

Query: 474 V 474
           V
Sbjct: 204 V 204


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V+S+G LYT+G   YG+LGHG   +  VP +V AL       +S G  HT
Sbjct: 228 VACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHT 287

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +   GK +Y +G  ++G++G G+     +P
Sbjct: 288 MALTSDGK-LYGWGWNKFGQVGAGDNADHCSP 318



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IA G +H+A VT +G +Y +G G YG LG G   +  VPE+V ++    +  V+CG  HT
Sbjct: 176 IAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHT 235

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + ++  G ++Y +G  +YG+LG G+
Sbjct: 236 ITVSSSG-SLYTYGWSKYGQLGHGD 259



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G  HS  + +   L T+G G+ G+LGHG   +  VP  +   +   + SV CG +HT
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
              ++    VY++G G++G+LG GN+    TPQ
Sbjct: 79  TAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQ 111



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 11/120 (9%)

Query: 388 RITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTT 446
           R+ P V  G   P            ++ CG  H+   + + + +Y++G GD+GRLGHG +
Sbjct: 54  RLVPTVISGFDAPGI---------TSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNS 104

Query: 447 MNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            +   P+ V AL  + ++ ++CG +H + +   G+ V ++G  + G+LGLG T     PQ
Sbjct: 105 TDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGE-VLSWGRNQNGQLGLGTTEDSLLPQ 163



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H   VT  G + ++G    G+LG GTT +  +P+ + A   + V+ ++ G  HT
Sbjct: 124 LACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHT 183

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + + G  +Y +G G YG LGLG+   +  P+
Sbjct: 184 AAVTEDGD-IYGWGWGRYGNLGLGDRNDRFVPE 215



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A + I I  ++ G  H LAV+  G+V +WG N + QLGLG   +   PQ + A    +
Sbjct: 113 VKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS 172

Query: 69  IRQVSAGRSHSAA 81
           ++ ++AG  H+AA
Sbjct: 173 VKMIAAGAEHTAA 185



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 40/75 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A K+     IS G  H +A+++ G+++ WG N   Q+G G+  ++  P  V     + 
Sbjct: 269 VEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQK 328

Query: 69  IRQVSAGRSHSAAWT 83
           + QV+ G  H+ A+T
Sbjct: 329 VAQVACGWRHTLAFT 343



 Score = 45.1 bits (105), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 37/71 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I AF+ I +  I+ G EH  AV+  G ++ WG      LGLG++ +   P+ V ++    
Sbjct: 165 IQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDK 224

Query: 69  IRQVSAGRSHS 79
           +  V+ G  H+
Sbjct: 225 MVLVACGWRHT 235



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVS-NTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F    I  +  G +H  A S +  QV++WG     +LG GN  +   PQ V AL   
Sbjct: 60  ISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI 119

Query: 68  NIRQVSAGRSHSAA 81
            I+Q++ G SH  A
Sbjct: 120 KIKQLACGDSHCLA 133



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G++H+  +TS+G LY +G   +G++G G   +   P +V    +  V  V+CG  HT
Sbjct: 280 ISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHT 339

Query: 474 VCI 476
           +  
Sbjct: 340 LAF 342



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 42/76 (55%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + + +   +V ++ G  H + VS++G ++ +G +   QLG G+  ++  P  V AL + +
Sbjct: 217 VSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSS 276

Query: 69  IRQVSAGRSHSAAWTA 84
             Q+S G  H+ A T+
Sbjct: 277 TSQISGGWRHTMALTS 292


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 58/92 (63%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG++H+  V+S+G LYT+G   YG+LGHG   +  +P ++ AL    +  +S G  HT
Sbjct: 228 VACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHT 287

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + +   GK +Y +G  ++G++G+G+   + +P
Sbjct: 288 MAVTSDGK-LYGWGWNKFGQVGVGDNVDRSSP 318



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H   VT  G + ++G    G+LG GTT +  VP+++ A   V ++ V+ G  HT
Sbjct: 124 IACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHT 183

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             + + G+ +Y +G G YG LGLG+   +  P+
Sbjct: 184 AAVTEDGE-LYGWGWGRYGNLGLGDRKDRLVPE 215



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 53/93 (56%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  + S   + T+G G+ G+LGHG   +   P  +  L  + + SV CG +HT
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHT 78

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           +  ++    VY++G G++G+LG GN+    TPQ
Sbjct: 79  IAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQ 111



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G +H+A VT +G LY +G G YG LG G   +  VPE+V   +   +  V+CG  HT
Sbjct: 176 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHT 235

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
           + ++  G  +Y +G  +YG+LG G+
Sbjct: 236 ISVSSSG-GLYTYGWSKYGQLGHGD 259



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 413 AIACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++ CG  H+ A   S+  +Y++G GD+GRLGHG + +   P+ +  L+ + ++ ++CG +
Sbjct: 70  SVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDS 129

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           H + +  +G+ V ++G  + G+LGLG T     PQ
Sbjct: 130 HCLAVTMEGQ-VQSWGRNQNGQLGLGTTEDSLVPQ 163



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 39/73 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I     + I  I+ G  H LAV+  GQV +WG N + QLGLG   +   PQ + A     
Sbjct: 113 IRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVP 172

Query: 69  IRQVSAGRSHSAA 81
           I+ V+AG  H+AA
Sbjct: 173 IKMVAAGAEHTAA 185



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           + I+ G++H+  VTS+G LY +G   +G++G G  ++   P +V    +  V  +SCG  
Sbjct: 278 SQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWR 337

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT+ + ++ + V+++G G  G+LG G    +  P
Sbjct: 338 HTLAVTER-QNVFSWGRGTNGQLGNGECTDRNVP 370



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNT-GQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           +   + + I+ +  G +H +A S +   V++WG     +LG GN  +   PQ +  L   
Sbjct: 60  LSTLEGLEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGL 119

Query: 68  NIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD--IPDHYGHLQNKPLPLIRA 125
            I+Q++ G SH  A T       + G   +  L LG  +D  +P      Q  P+ ++ A
Sbjct: 120 KIKQIACGDSHCLAVTMEG-QVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAA 178



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 8   HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLALSN 66
            + A +   I  IS G  H +AV++ G+++ WG N   Q+G+G+ ++   P Q+ L L  
Sbjct: 268 QLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQ 327

Query: 67  KNIRQVSAGRSHSAA 81
           K I  +S G  H+ A
Sbjct: 328 KVIL-ISCGWRHTLA 341



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 38/73 (52%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           + I AF+ + I  ++ G EH  AV+  G+++ WG      LGLG++ +   P+ V     
Sbjct: 163 QKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHG 222

Query: 67  KNIRQVSAGRSHS 79
           + +  V+ G  H+
Sbjct: 223 EKMVMVACGWRHT 235



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 39/68 (57%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +V ++ G  H ++VS++G ++ +G +   QLG G+  ++  P  + AL    I Q+S G 
Sbjct: 225 MVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGW 284

Query: 77  SHSAAWTA 84
            H+ A T+
Sbjct: 285 RHTMAVTS 292



 Score = 39.3 bits (90), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS-----NKNIRQ 71
           ++ IS G  H LAV+    VF+WG  ++ QLG G   +   P ++ ALS      ++I  
Sbjct: 329 VILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKALSVDGSCGQHIES 388

Query: 72  VSAGRSHSAAWTAP 85
                S    W  P
Sbjct: 389 SMVDSSSGKTWVLP 402


>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
           purpuratus]
          Length = 1139

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 7/97 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV---PERVVALNK--VHVESVSC 468
           +ACG  H+A+V +NG +YT+G    GRLG G  M+      P RV  L+   +HV +V+C
Sbjct: 777 LACGQDHAAIV-ANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRAVAC 835

Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           G  HT+ +  +GK +Y++G   YG+LG+G+  +   P
Sbjct: 836 GKEHTMAVTQEGK-LYSWGSSSYGQLGVGDRNVHSRP 871



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 1/93 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  H+ V+T +  L++FG G +G+LGHG   +  +P+ V  L+K  +  +S G  H
Sbjct: 884 SVACGQLHTLVLTQDQRLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGYAH 943

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           +  + + G+ V+ FG   +G+LG G+ G    P
Sbjct: 944 SGALTNDGQ-VWMFGSSSFGQLGTGSIGKSTVP 975



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           A+ACG +H+  VT  G LY++G+  YG+LG G       P  V AL+     SV+CG  H
Sbjct: 832 AVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLH 891

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           T+ +  + + +++FG G +G+LG G+   +  P+
Sbjct: 892 TLVLT-QDQRLWSFGWGVHGQLGHGDVEDQILPK 924



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 43/74 (58%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            I+ G+ HS  +T++G ++ FG+  +G+LG G+     VP R+ AL+  HV  ++CG    
Sbjct: 937  ISAGYAHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSN 996

Query: 474  VCIADKGKAVYAFG 487
            + I    + VY +G
Sbjct: 997  IAITSNPQKVYTWG 1010



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 43/69 (62%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           IH+  ++ G EH +AV+  G++++WG++S  QLG+G++  +  P  V ALS +    V+ 
Sbjct: 828 IHVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVAC 887

Query: 75  GRSHSAAWT 83
           G+ H+   T
Sbjct: 888 GQLHTLVLT 896



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            IV IS G  H  A++N GQV+ +G++S  QLG G+      P  + ALS+ ++  ++ G 
Sbjct: 934  IVGISAGYAHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGY 993

Query: 77   SHSAAWTAPPLPPHTPGHTP 96
              + A T+ P   +T G +P
Sbjct: 994  YSNIAITSNPQKVYTWGKSP 1013



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 35/65 (53%)

Query: 17   IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
            I  +++   H L ++  G +++WG+N   QLG+GN+++   P L+    +     V+AG 
Sbjct: 1068 IKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLINRSRDDQFVAVAAGS 1127

Query: 77   SHSAA 81
              S A
Sbjct: 1128 RFSLA 1132


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVV-ALNKVHVESVSCGL 470
           +ACG  H+  VT+ G LYT+G+G +  G LGHGT     +P+R+  AL+ + V  VSCG 
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   G+ ++ FGDG +G LG GN
Sbjct: 194 WHTALITSMGQ-LFTFGDGSFGVLGHGN 220



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 12/105 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++CG  H+A++TS G L+TFG+G +G LGHG   +   P+ V +L+ +   +V+CG+ 
Sbjct: 187 AYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVW 246

Query: 472 HTVCIAD----------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           HT  I +              ++ +GDG+  +LG G+  + LKPT
Sbjct: 247 HTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPT 291



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 3/101 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P    +RL      + CG +H+A+VT NG ++T+G    GRLGHGT  +   P  V +L
Sbjct: 67  LPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESL 126

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEY--GKLGLG 497
              +V+ V+CG  HT  +   G+ +Y +GDG +  G LG G
Sbjct: 127 AACNVDFVACGEFHTCAVTTTGE-LYTWGDGTHNVGLLGHG 166



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H AV+T    ++T+G G  GRLGHG   + KVP +V AL    V  ++CG N T
Sbjct: 356 VACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFT 415

Query: 474 VCIA 477
             I 
Sbjct: 416 AAIC 419



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVVT-----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A+ACG  H+A +            S G L+T+G+GD  RLGHG   +   P  V +L   
Sbjct: 240 AVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY 299

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               V+CG + TVC+   GK V + G+  YG+LG
Sbjct: 300 DFYRVACGHSLTVCLTTSGK-VLSMGNSVYGQLG 332



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 40/66 (60%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H++ ++ G+ HV  ++   +VF WG  ++ +LG G+  + + P  V AL ++ +R ++ G
Sbjct: 352 HVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411

Query: 76  RSHSAA 81
            + +AA
Sbjct: 412 ANFTAA 417



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  +  G  H   V+  G VF WG +S  +LG G + +   P+LV +L+  N+  V+ 
Sbjct: 77  LDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVAC 136

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 137 GEFHTCAVT 145



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT---MNWKVPERVV 456
           P   A+ + Y    +ACG   +  +T++G + + GN  YG+LG+  +   +   V +R+ 
Sbjct: 290 PTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIA 349

Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                HV  V+CG  H   +  + + V+ +G G  G+LG G+   +  P
Sbjct: 350 G---EHVLQVACGSYHVAVLTGRSE-VFTWGKGANGRLGHGDIEDRKVP 394


>gi|123466328|ref|XP_001317166.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121899893|gb|EAY04943.1| hypothetical protein TVAG_039950 [Trichomonas vaginalis G3]
          Length = 2511

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 53/167 (31%), Positives = 69/167 (41%), Gaps = 24/167 (14%)

Query: 196  PSVTVRRLTTKSKQTV--------KPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGAD 247
            P  T+ R   K++Q V          I  Q S  V     S LR   R W+V    E A 
Sbjct: 2141 PDFTINR--RKARQVVLSNSGDCRNTIIHQFSEFVDTHSTSSLRGRGRPWRVHFTDESAI 2198

Query: 248  DAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYI----LNPDLSESLQSLM 303
            DAGG   +   E+   +      L + +PNG   +G  RD YI    L P  S SL    
Sbjct: 2199 DAGGPSREAFNEIAISIFQSQSKLFILSPNGRNHSGGMRDVYIPFSSLRPFTSRSL---- 2254

Query: 304  HFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTL 350
             F  +G+  G+ IR       P +P VWK +  EP     L+ ND L
Sbjct: 2255 -FYAVGVFIGIVIRNGYFQDFPFAPFVWKYLANEP-----LDKNDIL 2295


>gi|348516218|ref|XP_003445636.1| PREDICTED: probable E3 ubiquitin-protein ligase C12orf51-like
            [Oreochromis niloticus]
          Length = 4554

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 171/411 (41%), Gaps = 47/411 (11%)

Query: 105  PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
            P D  D     L N P+  +R R  LL   ++ +      LPL  + Q        + L+
Sbjct: 4052 PSDAADPRVACLLNVPVESLRLRFALLQSLNNSLESF--FLPLVELRQTHTYENSIAALL 4109

Query: 164  HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
              +   +F     T+ + R +  T+     +  P +T+  L     + + +    F Q +
Sbjct: 4110 SEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLEIVGGEIRSSENTYFCQAA 4168

Query: 220  RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
            RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S A+ LL
Sbjct: 4169 RQLSCVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSALSLL 4228

Query: 273  VRTPNGVADTGYNRDRYILNP-DLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +  P+  A+   N+ +Y+L P  +S + + L+HF   G L G+AIR   PLPL L    W
Sbjct: 4229 LPCPSAAAN--RNKGKYVLTPCPISYAEEQLLHF--FGQLLGIAIRADVPLPLDLLGSFW 4284

Query: 332  KLIVQEPV-TFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII--------------P 376
            K +V EP+ +  DL++ D L    ++   ++      EA   EI               P
Sbjct: 4285 KGLVGEPLDSEQDLQEADVLTYNYVKKFENVTDETELEALCAEISSQHHSGESPDSPSRP 4344

Query: 377  LECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNG 436
               F   + TG    +  GG+S+ +++ N+  Y  A  +   +    V     +      
Sbjct: 4345 CCTFTYVTMTGEEVELCQGGRSLIVSWQNKDVYARAVRSLRLRELQNVECMTAV------ 4398

Query: 437  DYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
               R G G+ +  ++   +  L+ + +E  +CGL +      K   +Y  G
Sbjct: 4399 ---RAGLGSIIPLQL---LTMLSPIEIELRTCGLPYINLEFLKAHTMYQVG 4443


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 216 CCMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 248



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 240 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 299

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V    ++ I   +   +H++A
Sbjct: 300 PTPVTVEKDRIIEIAACHSTHTSA 323



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP ++   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 196



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L NK + 
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208

Query: 71  QVSAGR 76
            ++ G+
Sbjct: 209 TIACGQ 214



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 6/122 (4%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P Q+   L
Sbjct: 90  RRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLG--LPQDIPDHY-GHLQNKPLP 121
           SNK + +V+ G  HS   T+        G+  S  +  G  + Q IP    G LQNK + 
Sbjct: 150 SNKQVIEVACGSYHSLVLTSDG-EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208

Query: 122 LI 123
            I
Sbjct: 209 TI 210


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           IACG  H+ VVT++G LY +G+G Y  G LGHGT ++  +P+RV   L  + V SV+CG 
Sbjct: 332 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGS 391

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK ++ FGDG +G LG G+
Sbjct: 392 WHSALTMSSGK-LFTFGDGTFGSLGHGD 418



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 9/102 (8%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+  S+G L+TFG+G +G LGHG   +   P+ V AL+      V+CG+ H
Sbjct: 386 SVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWH 445

Query: 473 TVCIAD-KGKA--------VYAFGDGEYGKLGLGNTGLKPTP 505
           +  I +  G+A        ++ +GDG+  +LG G+   K  P
Sbjct: 446 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP 487



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 40/64 (62%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H A +TS   +YT+G G  GRLGHG+  + K P  V AL   HV+S+SCG N T
Sbjct: 553 ISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFT 612

Query: 474 VCIA 477
            CI 
Sbjct: 613 TCIC 616



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H  + T  G ++T+G    GRLGHGT  +   P+ V +L   +VE ++CG  HT
Sbjct: 280 IACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHT 339

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
            C+      +Y +GDG Y  G LG G
Sbjct: 340 -CVVTASGDLYDWGDGSYNAGLLGHG 364



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVV-------TSNGY---LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  HSA +       ++N     L+T+G+GD  RLGHG      VP  V AL   + 
Sbjct: 439 VACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNF 498

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             V+CG + TV +A  G  V+  G    G+LG
Sbjct: 499 HQVACGHSMTVALATSGH-VFTMGSSNNGQLG 529



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG   +  + ++G+++T G+ + G+LG+    + K P  V   L    VE +SCG NH
Sbjct: 501 VACGHSMTVALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQDKLGNELVEEISCGSNH 559

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +  + + VY +G G  G+LG G+   K  P
Sbjct: 560 VAALTSRSE-VYTWGMGANGRLGHGSVEDKKKP 591



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 41/62 (66%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N  + +IS G+ HV A+++  +V+ WG  ++ +LG G+  + ++P LV AL +++++ +S
Sbjct: 547 NELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSIS 606

Query: 74  AG 75
            G
Sbjct: 607 CG 608



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 36/70 (51%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G+ H+   +  G+VF WG     +LG G   +   P+LV +L+  N+  ++ 
Sbjct: 275 LDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIAC 334

Query: 75  GRSHSAAWTA 84
           G  H+   TA
Sbjct: 335 GEFHTCVVTA 344


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 216 CCMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 248



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 240 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 299

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V    ++ I   +   +H++A
Sbjct: 300 PTPVTMEKDRIIEIAACHSTHTSA 323



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 302 PVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP ++   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 196



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L NK + 
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208

Query: 71  QVSAGR 76
            ++ G+
Sbjct: 209 TIACGQ 214



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P Q+   L
Sbjct: 90  RRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169


>gi|392340833|ref|XP_001072061.3| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
           norvegicus]
 gi|392348476|ref|XP_216557.6| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
           norvegicus]
          Length = 500

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           HS ++T+ G L+++G  + G+LGHG T   + P  + AL+   +   +CG NHT+ + D 
Sbjct: 139 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 198

Query: 480 GKAVYAFGDGEYGKLGLGN-TGLKPTP 505
           G +V+AFG+ + G+LGLGN T   P+P
Sbjct: 199 G-SVFAFGENKMGQLGLGNQTDAVPSP 224



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 25/106 (23%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW------------KVPERVVALNK- 460
           +ACG + S ++   G LY+FG  +YG+LGH +   +             VP RV    + 
Sbjct: 237 MACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEK 296

Query: 461 -----------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
                      V V  V+CG NHT+ + D  K V+++G G YG+LG
Sbjct: 297 TKDGQILPVPNVVVRDVACGANHTL-VLDSQKRVFSWGFGGYGRLG 341



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 30/48 (62%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN 54
           R I A  +  IV  + G  H LA+++TG VFA+G N   QLGLGNQ +
Sbjct: 172 RLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTD 219



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           ACG  H+  +T  G ++ FG    G+LG G   +       +  N   +  ++CG   ++
Sbjct: 186 ACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSM 245

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTG 500
            +  KG  +Y+FG  EYG+LG  + G
Sbjct: 246 LMDCKGN-LYSFGCPEYGQLGHNSDG 270



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
           H L ++  G++++WG N   QLG G+      P+L+ ALS++ I   + GR+H+ A T
Sbjct: 139 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 196



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +ACG  H+ V+ S   ++++G G YGRLGH    +  VP R+V L
Sbjct: 313 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP-RLVKL 356


>gi|390343059|ref|XP_003725790.1| PREDICTED: probable E3 ubiquitin-protein ligase C12orf51-like
            [Strongylocentrotus purpuratus]
          Length = 2662

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 99/239 (41%), Gaps = 42/239 (17%)

Query: 204  TTKSKQTVKPIFAQISRQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDT 256
            +TK K    P F Q +  +  +  S L +       P+ A+ VKL+GE      G F   
Sbjct: 2256 STKDK---SPTFCQAASALANVYSSQLCVKIASGGDPTYAFNVKLVGEEVHGTSGSFRHF 2312

Query: 257  ITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAI 316
            + E+  EL    + LL+   +G A   Y R RYIL PD     +  M   F G L G+A+
Sbjct: 2313 LGEVTQELHGDRLRLLMPCLSGGAMDKY-RGRYILRPDPMTYPEERM-LLFFGQLLGIAM 2370

Query: 317  RTKKPLPLPLSPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII 375
            R   PL L L P  WK +VQEP+    DL + D    + L+ +        TE  F  + 
Sbjct: 2371 RADIPLALDLLPSFWKCLVQEPLDPDQDLAEADIATHRFLQKMEQAQ----TEEEFSAVC 2426

Query: 376  PL-------------------EC------FEGASWTGRITPIVTGGQSVPLTFANRLQY 409
             +                    C      FE  +  G +  +   G  +P++++NR +Y
Sbjct: 2427 SVIVAAYLHHHDQDSLSSPGAACAGMSLHFEYPNMMGDLVELCPNGHEIPVSWSNRREY 2485


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNG--DYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G+G   +G LGHG  ++  VP+ V   L  +HV S+SCG 
Sbjct: 240 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGP 299

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG G+
Sbjct: 300 WHTALVTSAGQ-LFTFGDGSFGVLGHGD 326



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++I+CG  H+A+VTS G L+TFG+G +G LGHG   +  VP  V +L  +     +CG+ 
Sbjct: 293 SSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVW 352

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+ G+LG G+   K  P
Sbjct: 353 HTAAVVEVMSVNSNSSNCSSGK-IFTWGDGDKGRLGHGDKEPKLVP 397



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  ++     +ACG   +  +T++G++YT G+  YG+LG+    +  +P RV   
Sbjct: 396 VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQA-DGMLPVRVEGK 454

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L K  VE +SCG  H   +  + + VY +G G  G+LG G+T  K TP
Sbjct: 455 LYKNFVEEISCGAYHVAVLTSRTE-VYTWGKGANGRLGHGDTEDKNTP 501



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H AV+TS   +YT+G G  GRLGHG T +   P  V AL    V +V CG+N T
Sbjct: 463 ISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNVVCGINFT 522

Query: 474 VCIA 477
             I 
Sbjct: 523 AAIC 526



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVVTS------------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V              +G ++T+G+GD GRLGHG      VP  V AL + +
Sbjct: 348 ACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEPN 407

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG   TV +   G  VY  G   YG+LG
Sbjct: 408 FCQVACGHCLTVALTTSGH-VYTMGSAVYGQLG 439



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
           +KN  + +IS G  HV  +++  +V+ WG  ++ +LG G+  +   P LV AL +K +R 
Sbjct: 456 YKNF-VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRN 514

Query: 72  VSAGRSHSAA 81
           V  G + +AA
Sbjct: 515 VVCGINFTAA 524



 Score = 41.6 bits (96), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 29/101 (28%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN 459
           PL FA RL      I+CG +H+A+VT    L                        + AL+
Sbjct: 200 PLEFAVRLDVQN--ISCGGRHAALVTKQAKL------------------------IDALS 233

Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDG--EYGKLGLGN 498
            +++E V+CG  HT  +   G  +Y +GDG  ++G LG GN
Sbjct: 234 HMNIELVACGEYHTCAVTLSGD-LYTWGDGTFKFGLLGHGN 273



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + IH+  IS G  H   V++ GQ+F +G+ S   LG G++ +   P+ V +L      +
Sbjct: 287 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVR 346

Query: 72  VSAGRSHSAA 81
            + G  H+AA
Sbjct: 347 AACGVWHTAA 356


>gi|395857718|ref|XP_003801232.1| PREDICTED: E3 ubiquitin-protein ligase HECTD3 isoform 1 [Otolemur
           garnettii]
          Length = 859

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 515 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 574

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 575 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 630

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + G+ +  F      E  F       ++  ++ GG 
Sbjct: 631 SWSKDFPAVDSVLVKLLEV-----MEGMDKETFEFKFGKELTFTTVLSDQQVVELIPGGA 685

Query: 398 SVPLTFANRLQYYE 411
            + + + +R ++ +
Sbjct: 686 GIVVKYEDRSRFIQ 699


>gi|417405011|gb|JAA49231.1| Putative e3 ubiquitin-protein ligase hectd3 [Desmodus rotundus]
          Length = 861

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 517 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 576

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 577 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 632

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + G+ +  F      E  F       ++  ++ GG 
Sbjct: 633 SWSKDFPAVDSVLVKLLEV-----MEGMDKETFEFKFGKELTFTTVLSDQQVVELIPGGA 687

Query: 398 SVPLTFANRLQYYE 411
            + + + +R ++ +
Sbjct: 688 GIVVEYEDRSRFIQ 701


>gi|297709728|ref|XP_002831574.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Pongo abelii]
          Length = 225

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +HSAVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  VSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 40/68 (58%)

Query: 12 FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
          FKN   V +S G EH   V+   +++ +G+N+  QLGLG++    +P  V AL  + ++ 
Sbjct: 32 FKNDVPVHVSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKL 91

Query: 72 VSAGRSHS 79
           + GR+H+
Sbjct: 92 AACGRNHT 99



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 9   IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
           I  F + H I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTI--GK 190

Query: 68  NIRQVSAGRSHSAAWTA 84
            +  +S G  HSA  T+
Sbjct: 191 PVSWISCGYYHSAFVTS 207



 Score = 39.3 bits (90), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G V+A G N++ QLGLG+        ++    S  
Sbjct: 81  VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH 140

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 13/119 (10%)

Query: 399 VPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
           +P   A  L+  + A + CG  H+A++TS G L+TFG+G +G LGHG   N   P  V +
Sbjct: 438 IPKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREVES 497

Query: 458 LNKVHVESVSCGLNHTVCIAD-----------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L+ +   SV+CG+ HT  I +            GK ++ +GDG+  +LG G+   +  P
Sbjct: 498 LSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGK-LFTWGDGDKNRLGHGDKDARLEP 555



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG KH+A+VT  G ++T+G    GRLGHG   N   P  V AL    V+ V+CG  HT
Sbjct: 347 IACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQPCLVEALASSTVDFVACGEFHT 406

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             +   G+ +Y +GDG +  G LG G
Sbjct: 407 CAVTMAGE-IYTWGDGTHNAGLLGHG 431



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT  G +YT+G+G +  G LGHGT ++  +P+R+   L  + V  V+CG 
Sbjct: 399 VACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGP 458

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  I   G+ ++ FGDG +G LG G+
Sbjct: 459 WHTALITSTGQ-LFTFGDGTFGVLGHGD 485



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 38/64 (59%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H  V+TS   +YT+G G  GRLGHG   + K P  V AL   HV+ ++CG N++
Sbjct: 621 IACGAYHVTVLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYS 680

Query: 474 VCIA 477
             I 
Sbjct: 681 AAIC 684



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVVT-----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           ++ACG  H+A +            S+G L+T+G+GD  RLGHG       P  + AL   
Sbjct: 505 SVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDY 564

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           +   ++CG + TV +   G+ V+  G   YG+LG
Sbjct: 565 NFHRIACGHSLTVGLTTSGR-VFTMGSTVYGQLG 597



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-AL 458
           P   +  + Y    IACG   +  +T++G ++T G+  YG+LG+  + + K+P  V   L
Sbjct: 555 PTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQS-DGKLPCLVEDKL 613

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               VE ++CG  H   +  + + VY +G G  G+LG G+   + TP
Sbjct: 614 AGECVEEIACGAYHVTVLTSRNE-VYTWGKGANGRLGHGDVEDRKTP 659



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 42/65 (64%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  ++ +LG G+  + + P LV AL +++++ ++ G 
Sbjct: 618 VEEIACGAYHVTVLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGS 677

Query: 77  SHSAA 81
           ++SAA
Sbjct: 678 NYSAA 682



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 38/69 (55%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + ++ I+ G +H   V+  G++F WG  S  +LG G   N  +P LV AL++  +  V+ 
Sbjct: 342 LDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQPCLVEALASSTVDFVAC 401

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 402 GEFHTCAVT 410


>gi|145544088|ref|XP_001457729.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124425547|emb|CAK90332.1| unnamed protein product [Paramecium tetraurelia]
          Length = 262

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 56/93 (60%), Gaps = 7/93 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH------VESVS 467
           ++CG  H+A++T NG++YT G  ++ +LGH T  + + P+++  L+K +      V  VS
Sbjct: 46  VSCGKDHTALLTQNGHVYTMGCNEHNKLGHVTKQSVQAPQKIEQLSKYNLLYQKRVIQVS 105

Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           CG  HT C+   G ++Y +GD   G+LG+   G
Sbjct: 106 CGYTHTACVTSDG-SLYTWGDNSCGQLGVKQNG 137



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 8   HIPAFKNIHI--VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           HIP   +  I  V +S G +H   ++  G V+  G N   +LG   + + + PQ +  LS
Sbjct: 32  HIPKICHYKIGFVQVSCGKDHTALLTQNGHVYTMGCNEHNKLGHVTKQSVQAPQKIEQLS 91

Query: 66  ------NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
                  K + QVS G +H+A  T+     +T G   +S  +LG+ Q+
Sbjct: 92  KYNLLYQKRVIQVSCGYTHTACVTSDG-SLYTWG--DNSCGQLGVKQN 136


>gi|35193056|gb|AAH58664.1| AU042671 protein [Mus musculus]
          Length = 1062

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 35/337 (10%)

Query: 105 PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
           P D  D     L N P+  +R R  LL   +  +      LPL  + Q  +     + L+
Sbjct: 561 PADAADPRMACLSNVPIESLRLRFALLQSLNTTLETF--FLPLVELRQTPMYAHSIAALL 618

Query: 164 HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
             +   +F     T+ + R +  T+     +  P +T+  L     + + +    F Q +
Sbjct: 619 KEAKGLIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLEIVGGEIRASENSYFCQAA 677

Query: 220 RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
           RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S ++ LL
Sbjct: 678 RQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLL 737

Query: 273 VRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
           +  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L P  W
Sbjct: 738 LLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDLLPSFW 793

Query: 332 KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII-----------PLEC 379
           K +V EP+    DL++ D L    ++    I+     EA   EI            P  C
Sbjct: 794 KTLVGEPLDPDQDLQEADILTYNYVKKFESINDESELEALCAEIASQHLATESPEGPKPC 853

Query: 380 --FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
             F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 854 CRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 889


>gi|432094955|gb|ELK26363.1| hypothetical protein MDA_GLEAN10020253 [Myotis davidii]
          Length = 2334

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 28/223 (12%)

Query: 215  FAQISRQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSG 267
            F Q +RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S 
Sbjct: 1944 FCQAARQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSS 2003

Query: 268  AVPLLVRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326
            ++ LL+  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L
Sbjct: 2004 SLSLLLLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDL 2059

Query: 327  SPLVWKLIVQEPVT-FTDLEDNDTL---YAQSLRAIRD-IHLSG----------VTEANF 371
             P  WK +V EP+    DL++ D L   Y +   +I D I L            VTE+  
Sbjct: 2060 LPSFWKTLVGEPLDPDQDLQEADILTYNYVKKFESINDEIELEALCAEIASQHLVTESPD 2119

Query: 372  PEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
                P   F   + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 2120 SPNKPCCRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 2161


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 4/127 (3%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
           G + +G++    T  Q +P      LQ      IACG      V   G +Y +G    G+
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236

Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           LG G++ N   P RV AL  + V+ V+CG  HT+ + D+G+ VYA+G   YG+LG GN  
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295

Query: 501 LK--PTP 505
            +  PTP
Sbjct: 296 NQSYPTP 302



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 4/94 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
           +ACG  HS V+TS+G ++ +G  + G++G G+T+N  +P RV     NKV V +++CG  
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 215

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
             + + D G+ VY +G    G+LGLG++G +PTP
Sbjct: 216 CCMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 248



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R     +N  +V I+ G    +AV +TG+V+ WG N + QLGLG+  N   P  V AL  
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 67  KNIRQVSAGRSHSAAWT 83
             +++V+ G +H+   T
Sbjct: 257 IRVQRVACGYAHTLVLT 273



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 3   GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
           G+SG       + A + I +  ++ G  H L +++ GQV+AWG NS  QLG GN+ N   
Sbjct: 240 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 299

Query: 58  PQLVLALSNKNIRQVSAGRSHSAA 81
           P  V    ++ I   +   +H++A
Sbjct: 300 PTPVTVEKDRIIEIAACHSTHTSA 323



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
           +G Q  P   A         +ACG+ H+ V+T  G +Y +G   YG+LG G   N   P 
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301

Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
            V       +E  +C   HT     +G  VY +G
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
           H  + T+ G ++T+G+  Y +LG+GTT +  VP ++   L+   V  V+CG  H++ +  
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            G+ V+A+G    G++G G+T  +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 196



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
             N  +++++ G+ H L +++ G+VFAWG N+  Q+G G+ +N   P+ V   L NK + 
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208

Query: 71  QVSAGR 76
            ++ G+
Sbjct: 209 TIACGQ 214



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 7   RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
           R + +     I  +S G+  H++  +  G+VF WG+N+ +QLG G   +   P Q+   L
Sbjct: 90  RRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNL 149

Query: 65  SNKNIRQVSAGRSHSAAWTA 84
           SNK + +V+ G  HS   T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169


>gi|395857720|ref|XP_003801233.1| PREDICTED: E3 ubiquitin-protein ligase HECTD3 isoform 2 [Otolemur
           garnettii]
          Length = 729

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 385 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 444

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 445 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 500

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + G+ +  F      E  F       ++  ++ GG 
Sbjct: 501 SWSKDFPAVDSVLVKLLEV-----MEGMDKETFEFKFGKELTFTTVLSDQQVVELIPGGA 555

Query: 398 SVPLTFANRLQYYE 411
            + + + +R ++ +
Sbjct: 556 GIVVKYEDRSRFIQ 569


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 4/93 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA--LNKVHVESVSCGLN 471
           +ACG  HSA VT  G LYT+G G  G+LGHG   +   P+RV A   +K+ V+ V+CG N
Sbjct: 740 VACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVK-VACGEN 798

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           H+  + D    +Y  G  E G+LG G+  +  T
Sbjct: 799 HSAAV-DSAGVIYTTGGDESGQLGKGDEWICAT 830



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 21/114 (18%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM---------NWKV-----------P 452
           +IA G  HSA+VT++G LYTFG G   +LGH T M         +++            P
Sbjct: 667 SIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKP 726

Query: 453 ERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            R+ ALN   V+ V+CG  H+ C+ ++G A+Y +G G  G+LG G+   + TP+
Sbjct: 727 TRLSALNGQVVKQVACGRFHSACVTEEG-ALYTWGRGANGQLGHGDMTDQATPK 779



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 7/95 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG    A +T+ G LYT+G G    LG G + +   P  + +++   V SV+CG  H 
Sbjct: 863 IACGHGFCAAITNRGLLYTWGKGTA--LGLGPSGDVSEPTHLSSIDG--VVSVACGDIHA 918

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
             + DKG+ +Y +G  E G+LG G +  G+  TP+
Sbjct: 919 AALTDKGQ-LYMWGSSEAGRLGDGRSTEGVTRTPK 952



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 47/109 (43%), Gaps = 19/109 (17%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG------------TTMNWKVPERV----VA 457
           +ACG  HSA V S G +YT G  + G+LG G            T   W   ER+      
Sbjct: 793 VACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSI 852

Query: 458 LNKVHVESVSCGLNHTVCIADKGKA-VYAFGDGEYGKLGLGNTGLKPTP 505
           L+  HV+ V     H  C A   +  +Y +G G    LGLG +G    P
Sbjct: 853 LSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGT--ALGLGPSGDVSEP 899



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQVSAG 75
           +  ++ G  H   V+  G ++ WG  ++ QLG G+  +   P+ V A + +K + +V+ G
Sbjct: 737 VKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKVACG 796

Query: 76  RSHSAA 81
            +HSAA
Sbjct: 797 ENHSAA 802



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN--WKVPERVVALNKVHVE---SVS 467
           ++ACG  H+A +T  G LY +G+ + GRLG G +     + P+ V A   +H      VS
Sbjct: 910 SVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTEGVTRTPKLVPAFADIHQARCLGVS 969

Query: 468 CGLNHTVCIA 477
            G  H + I+
Sbjct: 970 IGPRHALAIS 979


>gi|148681378|gb|EDL13325.1| regulator of chromosome condensation 2 [Mus musculus]
          Length = 498

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
           HS ++T+ G L+++G  + G+LGHG T   + P  + AL+   +   +CG NHT+ + D 
Sbjct: 137 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 196

Query: 480 GKAVYAFGDGEYGKLGLGN-TGLKPTP 505
           G +V+AFG+ + G+LGLGN T   P+P
Sbjct: 197 G-SVFAFGENKMGQLGLGNQTDAVPSP 222



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 25/106 (23%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW------------KVPERVVALNK- 460
           +ACG + S ++   G LY+FG  +YG+LGH +   +             VP RV    + 
Sbjct: 235 MACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEK 294

Query: 461 -----------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
                      V V  V+CG NHT+ + D  K V+++G G YG+LG
Sbjct: 295 TKDGQILPVPNVVVRDVACGANHTL-VLDSQKRVFSWGFGGYGRLG 339



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
           ACG  H+  +T  G ++ FG    G+LG G   +       +  N   +  ++CG   ++
Sbjct: 184 ACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSM 243

Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTG 500
            +  KG  +Y+FG  EYG+LG  + G
Sbjct: 244 LMDCKGN-LYSFGCPEYGQLGHNSDG 268



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 30/48 (62%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN 54
           R I A  +  IV  + G  H LA+++TG VFA+G N   QLGLGNQ +
Sbjct: 170 RLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTD 217



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%)

Query: 26  HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
           H L ++  G++++WG N   QLG G+      P+L+ ALS++ I   + GR+H+ A T
Sbjct: 137 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 194



 Score = 39.3 bits (90), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +ACG  H+ V+ S   ++++G G YGRLGH    +  VP R+V L
Sbjct: 311 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP-RLVKL 354


>gi|2981265|gb|AAC06339.1| similar to golgi antigen; similar to U50078 (PID:g1477565), partial
           [Homo sapiens]
          Length = 371

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 44/75 (58%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   IV ++VG +H LAV ++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 80  VEGLRGKKIVHVAVGAQHCLAVMDSGQVYAWGDNDHGQQGNGTTTVNRKPMLVQGLEGQK 139

Query: 69  IRQVSAGRSHSAAWT 83
           I  V+ G SHS AWT
Sbjct: 140 IMCVACGSSHSVAWT 154



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG +    +T +G ++T+G GDY RLGH + ++ + P+ V  L    +  V+ G  H 
Sbjct: 39  IECGAQFLLALTKSGVVWTWGKGDYFRLGHRSDVHVRKPQVVEGLRGKKIVHVAVGAQHC 98

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + + D G+ VYA+GD ++G+ G G T +   P
Sbjct: 99  LAVMDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 129



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 428 GYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
           G ++++G+GD+G+LG G +    +P+ +  LN   V  + CG    + +   G  V+ +G
Sbjct: 1   GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFLLALTKSG-VVWTWG 59

Query: 488 DGEYGKLG 495
            G+Y +LG
Sbjct: 60  KGDYFRLG 67



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)

Query: 3   GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
           G+ G +IP  +NI       +  I  G + +LA++ +G V+ WG     +LG  + ++ R
Sbjct: 18  GSEGCNIP--QNIERLNGQGVCQIECGAQFLLALTKSGVVWTWGKGDYFRLGHRSDVHVR 75

Query: 57  EPQLVLALSNKNIRQVSAGRSHSAA 81
           +PQ+V  L  K I  V+ G  H  A
Sbjct: 76  KPQVVEGLRGKKIVHVAVGAQHCLA 100



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G +H   V  +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 91  VAVGAQHCLAVMDSGQVYAWGDNDHGQQGNGTTTVNRKPMLVQGLEGQKIMCVACGSSHS 150

Query: 474 V 474
           V
Sbjct: 151 V 151


>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 416

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG +H+AVVT N  LY FG+ ++G+LG G+      P  V AL    V+  +CG NHT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
           + ++ +G  VYA G    G+LGLG+T  + T
Sbjct: 100 L-VSTEGGKVYAAGGNNEGQLGLGDTEERST 129



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
           +ACG  H+ V+T    +YTFG G +G+LG GT +    VP+ +  +    +  ++CG NH
Sbjct: 248 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENH 306

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
           T  I D G  +Y FGDG +GKLGLG
Sbjct: 307 TALITDMG-LMYTFGDGRHGKLGLG 330



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 5/86 (5%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
           I+CG+ HSA VT+ G LYTFG  + G+LG  +   +N ++P+ V  +    V+ V+CG  
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGG 253

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
           HTV + +  KAVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--KAVYTFGLGQFGQLGLG 277



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
           IACG  H+A++T  G +YTFG+G +G+LG G   + N  +P       +  V+ VSCG  
Sbjct: 300 IACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGC 359

Query: 472 HTVCIA 477
           HT+  A
Sbjct: 360 HTLVFA 365



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++ G   SA +T +G L+ +G+   G++G     N  VP++V     +    +SCG  H+
Sbjct: 145 LSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPI--SWISCGYYHS 202

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
             +  +G+ +Y FG+ E GKLGL N
Sbjct: 203 AFVTTEGQ-LYTFGEPECGKLGLPN 226



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 7/111 (6%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +S G+    A++  G++F WG+NS+ Q+GL N  N   PQ V     K I  +S G 
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGY 199

Query: 77  SHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARL 127
            HSA  T      +T G       +LGLP  +  +  H   +P+P I  ++
Sbjct: 200 YHSAFVTTEG-QLYTFGEPECG--KLGLPNQLLVN--HRMPQPVPGIPGKV 245



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 7   RHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
            +IP+   F+N     +S G EH   V+   +++ +G+N+  QLGLG++    +P  V A
Sbjct: 24  ENIPSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKA 83

Query: 64  LSNKNIRQVSAGRSHSAAWT 83
           L  + ++  + GR+H+   T
Sbjct: 84  LKPEKVKFAACGRNHTLVST 103



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
           + A K   +   + G  H L  +  G+V+A G N++ QLGLG+        L+    S +
Sbjct: 81  VKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR 140

Query: 68  NIRQVSAGRSHSAAWT 83
            I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156


>gi|402854331|ref|XP_003891827.1| PREDICTED: E3 ubiquitin-protein ligase HECTD3 [Papio anubis]
          Length = 921

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 577 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 636

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 637 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 692

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + G+ +  F      E  F       ++  ++ GG 
Sbjct: 693 SWSKDFPAVDSVLVKLLEV-----MEGMDKETFEFKFGKELTFTTVLSDQQVVELIPGGA 747

Query: 398 SVPLTFANRLQYYE 411
            + + + +R ++ +
Sbjct: 748 GIIVGYGDRSRFIQ 761


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 7/95 (7%)

Query: 406 RLQYYEAA----IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           R +++E      + CG +H+  +  +G +YT G  D G+LGH      K PE+VV+L+  
Sbjct: 27  RCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKAR--KKPEQVVSLDAQ 84

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
           ++ +VSCG  HT+ + DKG+ V+A+G G  G+LGL
Sbjct: 85  NIVAVSCGEAHTLALNDKGQ-VFAWGLGSDGQLGL 118



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 2/94 (2%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H+A +T  G ++TFG G YG+LGH +T +   P +V  L    V  ++CG  HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHT 306

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTG--LKPTP 505
           +        + +FG G  G+LG  +T   + PTP
Sbjct: 307 LAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTP 340



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 2/89 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLN 471
           A++CG  H+  +   G ++ +G G  G+LG     +  +VP  V +L++VH+  V+CG  
Sbjct: 88  AVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYW 147

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
           H++ +A +G  ++++G  +YG+LGLG  G
Sbjct: 148 HSLALA-RGGEIFSWGQNKYGQLGLGQQG 175



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ-INYREPQLVLALS 65
           R + +   +HI  ++ G  H LA++  G++F+WG N   QLGLG Q      PQ++ +L 
Sbjct: 129 RTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQ 188

Query: 66  NKNIRQVSAGRSHSAAWT 83
                Q+SAG +HS   T
Sbjct: 189 GIPFGQISAGGAHSFGLT 206



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLALSNKNIRQVSA 74
           +IV +S G  H LA+++ GQVFAWG  SD QLGL   +   R P+ V +LS  +I QV+ 
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVAC 144

Query: 75  GRSHSAA 81
           G  HS A
Sbjct: 145 GYWHSLA 151



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  HS  +T +G ++ +G   +G+LG G   + + P  +  L    V  + CG +HT
Sbjct: 195 ISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHT 254

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
             +  +G  V+ FG G YG+LG  +T  +  P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTNHEVNPR 286



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           I + + I    IS G  H   ++ +G +F WG N   QLGLG+  + R P L+  L ++ 
Sbjct: 184 IQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQ 243

Query: 69  IRQVSAGRSHSAAWT 83
           +  +  G  H+AA T
Sbjct: 244 VVYICCGEDHTAALT 258



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)

Query: 392 IVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV 451
           IV     VP T  +  + +   +ACG+ HS  +   G ++++G   YG+LG G       
Sbjct: 120 IVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVC 179

Query: 452 -PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            P+ + +L  +    +S G  H+  +   G A++ +G  ++G+LGLG+   +  P
Sbjct: 180 SPQVIQSLQGIPFGQISAGGAHSFGLTLSG-AIFGWGRNKFGQLGLGDNDDRRFP 233



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R    F+   + D+  G  H + +   G V+  G N   QLG  ++   ++P+ V++L  
Sbjct: 26 RRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLG--HEKARKKPEQVVSLDA 83

Query: 67 KNIRQVSAGRSHSAA 81
          +NI  VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 36/74 (48%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   ++  +V I  G +H  A++  G VF +G     QLG  +  +   P+ V  L    
Sbjct: 236 LKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSV 295

Query: 69  IRQVSAGRSHSAAW 82
           + Q++ GR H+ A+
Sbjct: 296 VSQIACGRQHTLAF 309


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 8/109 (7%)

Query: 393 VTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWK 450
           VTG Q +    A  + +    +ACG  H+  VT  G +YT+G+G +  G LGHGT ++  
Sbjct: 312 VTGPQLIESLAATSIDF----VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHW 367

Query: 451 VPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           +P+R+   L  + + SVSCG  HT  I   G+ ++ FGDG +G LG G+
Sbjct: 368 IPKRISGPLEGLQIASVSCGPWHTALITSTGQ-LFTFGDGTFGVLGHGD 415



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 14/106 (13%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A+++CG  H+A++TS G L+TFG+G +G LGHG       P  V +L+ +   +V+CG+ 
Sbjct: 382 ASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVW 441

Query: 472 HTVCIAD-----------KGKAVYAFGDGEYGKLGLGNTG--LKPT 504
           H   I +            GK ++ +GDG+  +LG G+    LKPT
Sbjct: 442 HAAAIVEVIVTHSSSSVSSGK-LFTWGDGDKSRLGHGDKEPRLKPT 486



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG KH+A+V+  G ++T+G    GRLGHG   +   P+ + +L    ++ V+CG  HT
Sbjct: 277 IACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHT 336

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             +   G+ +Y +GDG +  G LG G
Sbjct: 337 CAVTMTGE-IYTWGDGTHNAGLLGHG 361



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   ++T+G G  GRLGHG   + K P  V AL + HV++++CG N T
Sbjct: 551 IACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFT 610

Query: 474 VCIA 477
             I 
Sbjct: 611 AAIC 614



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVVTS-----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A+ACG  H+A +             +G L+T+G+GD  RLGHG       P  V AL   
Sbjct: 435 AVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDH 494

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
               V+CG + TV +   GK VY  G   YG+LG
Sbjct: 495 TFHRVACGHSLTVGLTTSGK-VYTMGSTVYGQLG 527



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG   +  +T++G +YT G+  YG+LG+    + K+P  V   L K  VE ++CG  H
Sbjct: 499 VACGHSLTVGLTTSGKVYTMGSTVYGQLGN-PNADGKLPCLVEDKLTKDCVEEIACGAYH 557

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +  + + V+ +G G  G+LG G+   +  P
Sbjct: 558 VAVLTSRNE-VFTWGKGANGRLGHGDVEDRKAP 589



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 40/65 (61%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +VF WG  ++ +LG G+  + + P LV AL  ++++ ++ G 
Sbjct: 548 VEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGS 607

Query: 77  SHSAA 81
           + +AA
Sbjct: 608 NFTAA 612



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 35/64 (54%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I+ G +H   VS  G+VF WG  S  +LG G   +   PQL+ +L+  +I  V+ G  H+
Sbjct: 277 IACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHT 336

Query: 80  AAWT 83
            A T
Sbjct: 337 CAVT 340


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  H+A VTS+G LY  G+ +  +LG     +   P RV AL +  V+ V+CG  HT
Sbjct: 38  LAAGALHTAAVTSDGELYVMGSNEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHT 97

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
           + + D G AV AFG  EYG++GLG  G +
Sbjct: 98  LAVVD-GGAVAAFGSAEYGQVGLGPCGAR 125



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 6/79 (7%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRL-----GHGTTMNWKVPERVVALNKVHVESVSC 468
           IACG  HSA +T++G + T+G G +  L     GHG   N   P+ V AL  +    VSC
Sbjct: 195 IACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFENCSTPKPVQALKGIVGRQVSC 254

Query: 469 GLNHTVCIADKGKAVYAFG 487
           G +HTV + + G +VYA+G
Sbjct: 255 GDDHTVLLTEDG-SVYAWG 272



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESV 466
           Q+    +ACG  H+  V   G +  FG+ +YG++G G      ++P  V  L  +H+  V
Sbjct: 84  QFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKDLRSMHIVRV 143

Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + G +HT+ ++  G  V++ G+G +G LG G T     P+
Sbjct: 144 AAGGSHTLALSSTG-GVFSCGNGSFGALGRGTTEGNDVPR 182



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
           R +   +++HIV ++ G  H LA+S+TG VF+ GN S   LG G       P+ +  L  
Sbjct: 130 RVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGNDVPRPISRLWP 189

Query: 67  KNIRQVSAGRSHSAAWTA 84
             + Q++ G +HSAA TA
Sbjct: 190 LGVVQIACGENHSAAITA 207



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  H+  ++S G +++ GNG +G LG GTT    VP  +  L  + V  ++CG NH+
Sbjct: 143 VAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGNDVPRPISRLWPLGVVQIACGENHS 202

Query: 474 VCIADKGKAVYAFGDGEY 491
             I   G+ V  +G G++
Sbjct: 203 AAITADGR-VLTWGRGKH 219



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 44/75 (58%)

Query: 7  RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
          R +   K+  +V+++ G  H  AV++ G+++  G+N ++QLG+  + +   P  V AL  
Sbjct: 25 RLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNEESQLGVRQRSDALAPTRVTALEQ 84

Query: 67 KNIRQVSAGRSHSAA 81
            +++V+ G +H+ A
Sbjct: 85 FQVQRVACGPAHTLA 99



 Score = 39.7 bits (91), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE-PQLVLALSNK 67
           + A +   +  ++ G  H LAV + G V A+G+    Q+GLG      E P++V  L + 
Sbjct: 79  VTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKDLRSM 138

Query: 68  NIRQVSAGRSHSAAWTA 84
           +I +V+AG SH+ A ++
Sbjct: 139 HIVRVAAGGSHTLALSS 155


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+A+V+S G L+TFG+G +G LGHG   N  +P+ V +L  +     +CG+ 
Sbjct: 399 SSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIW 458

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+  +LG G+   K  P
Sbjct: 459 HTAAVVEVIVGYSSATSCSSGK-LFTWGDGDKYRLGHGDKEQKLVP 503



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 2/84 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG +H+A+VT  G ++ +G    GRLGHG  ++   P+ V AL  V+ E V+CG  
Sbjct: 292 SSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNAELVACGDF 351

Query: 472 HTVCIADKGKAVYAFG-DGEYGKL 494
           HT  +   G+ +Y +G D + G L
Sbjct: 352 HTCAVTLSGE-LYTWGADAQSGGL 374



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G      G +GH   ++  +P+R+ + L  V + S++CG 
Sbjct: 346 VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSIACGA 405

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  ++  G+ ++ FGDG +G LG G+
Sbjct: 406 WHTALVSSAGQ-LFTFGDGTFGVLGHGD 432



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  + Y    +ACG   +  +T++G ++T G+  YG+LG+    + KVP  V   
Sbjct: 502 VPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGN-PKADGKVPGMVDGE 560

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L +  VE + CG +H   ++ K + +Y +G G  G+LG G+   +  P
Sbjct: 561 LARTFVEEIGCGAHHVAALSSKTE-IYTWGKGANGRLGHGDVEDRTAP 607



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVV------------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V             S+G L+T+G+GD  RLGHG      VP  V AL   +
Sbjct: 454 ACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYN 513

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G+ V+  G   YG+LG
Sbjct: 514 FRQVACGHSLTVALTTSGR-VFTMGSTIYGQLG 545



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 35/64 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H A ++S   +YT+G G  GRLGHG   +   P  V AL    V++V+CG + T
Sbjct: 569 IGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFT 628

Query: 474 VCIA 477
             I 
Sbjct: 629 AVIC 632



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 36/69 (52%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G+ H   V+  G VF WG     +LG G  ++  EPQLV AL+  N   V+ 
Sbjct: 289 LDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNAELVAC 348

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 349 GDFHTCAVT 357



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 38/64 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I  G  HV A+S+  +++ WG  ++ +LG G+  +   P LV AL +K ++ V+ G 
Sbjct: 566 VEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGS 625

Query: 77  SHSA 80
           S +A
Sbjct: 626 SFTA 629



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 12/89 (13%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           + + + K +  V  + G  H  AV             ++G++F WG+    +LG G++  
Sbjct: 440 KEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQ 499

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWT 83
              P  V AL + N RQV+ G S + A T
Sbjct: 500 KLVPTCVAALVDYNFRQVACGHSLTVALT 528


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 9/101 (8%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H+A++TS+G LYT+G+G +G LGHG T     P+ V  L    V+ V+CG  HT
Sbjct: 371 IACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVKCVACGPWHT 430

Query: 474 VCIAD-----KGKA----VYAFGDGEYGKLGLGNTGLKPTP 505
             I +     K  +    ++ +GD + GKLG  +  +K  P
Sbjct: 431 AAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIP 471



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 6   GRHIPA----FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
           GR + A     K   +  IS G+ HV  ++  G+VF WG   + QLGLG+ +N   P LV
Sbjct: 519 GRTVCAVEGLLKTEFVRHISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLV 578

Query: 62  LALSNKNIRQVSAGRSHSAA 81
            AL  + +  +S G +++AA
Sbjct: 579 DALEGRQVESISCGYNYTAA 598



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+ G  H AV+T+NG ++T+G G  G+LG G  +N   P  V AL    VES+SCG N+T
Sbjct: 537 ISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESISCGYNYT 596

Query: 474 VCIA 477
             + 
Sbjct: 597 AAVC 600



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 4/89 (4%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDY-GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           A+A G KH+  VT +G L+ +G G + G+L       W  P ++ + L+ + V  ++CG 
Sbjct: 317 AVAYGSKHACAVTVSGELFEWGEGPHMGQLDCYANNLW-FPHKLFSPLDGISVVKIACGP 375

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
            HT  I   G+ +Y +GDG +G LG G+T
Sbjct: 376 WHTAIITSSGQ-LYTYGDGTFGVLGHGDT 403



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           +IACG  H+A++T  G +Y++GN   G +G+   +    P+ V ++  +HV++V+ G  H
Sbjct: 265 SIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVASLHVKAVAYGSKH 324

Query: 473 TVCIADKGKAVYAFGDG 489
              +   G+ ++ +G+G
Sbjct: 325 ACAVTVSGE-LFEWGEG 340



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 4/71 (5%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR--EPQLVLALSNKNIRQV 72
           + +  I+ G  H   ++  G+V++WGN S    G+GNQ+N +   P+LV ++++ +++ V
Sbjct: 261 LDVQSIACGETHAAIITKQGEVYSWGNESSG--GIGNQVNIKVSRPKLVESVASLHVKAV 318

Query: 73  SAGRSHSAAWT 83
           + G  H+ A T
Sbjct: 319 AYGSKHACAVT 329



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           +P    +   Y    ++CG   + V++  G ++T G+  +G+LG+       V      L
Sbjct: 470 IPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADGRTVCAVEGLL 529

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               V  +S G +H   +   GK V+ +G G+ G+LGLG+   + TP
Sbjct: 530 KTEFVRHISSGSSHVAVLTTNGK-VFTWGKGKEGQLGLGDYLNRSTP 575



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 11/93 (11%)

Query: 413 AIACGFKHSAVVTS----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
            +ACG  H+A +               L+T+G+ D G+LGH       +P  V +L    
Sbjct: 422 CVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYD 481

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              VSCG+  TV ++  G  V+  G   +G+LG
Sbjct: 482 FIQVSCGMALTVVLSITG-VVFTIGSSMHGQLG 513


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           IACG  H+ VVT++G LY +G+G Y  G LGHGT ++  +P+RV   L  + V SV+CG 
Sbjct: 318 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGS 377

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK ++ FGDG +G LG G+
Sbjct: 378 WHSALTMSSGK-LFTFGDGTFGSLGHGD 404



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 9/102 (8%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+  S+G L+TFG+G +G LGHG   +   P+ V AL+      V+CG+ H
Sbjct: 372 SVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWH 431

Query: 473 TVCIAD-KGKA--------VYAFGDGEYGKLGLGNTGLKPTP 505
           +  I +  G+A        ++ +GDG+  +LG G+   K  P
Sbjct: 432 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP 473



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 40/64 (62%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H A +TS   +YT+G G  GRLGHG+  + K P  V AL   HV+S+SCG N T
Sbjct: 539 ISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFT 598

Query: 474 VCIA 477
            CI 
Sbjct: 599 TCIC 602



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H  + T  G ++T+G    GRLGHGT  +   P+ V +L   +VE ++CG  HT
Sbjct: 266 IACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHT 325

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
            C+      +Y +GDG Y  G LG G
Sbjct: 326 -CVVTASGDLYDWGDGSYNAGLLGHG 350



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVV-------TSNGY---LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  HSA +       ++N     L+T+G+GD  RLGHG      VP  V AL   + 
Sbjct: 425 VACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNF 484

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             V+CG + TV +A  G  V+  G    G+LG
Sbjct: 485 HQVACGHSMTVALATSGH-VFTMGSSNNGQLG 515



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG   +  + ++G+++T G+ + G+LG+    + K P  V   L    VE +SCG NH
Sbjct: 487 VACGHSMTVALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQDKLGNELVEEISCGSNH 545

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +  + + VY +G G  G+LG G+   K  P
Sbjct: 546 VAALTSRSE-VYTWGMGANGRLGHGSVEDKKKP 577



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 41/62 (66%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N  + +IS G+ HV A+++  +V+ WG  ++ +LG G+  + ++P LV AL +++++ +S
Sbjct: 533 NELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSIS 592

Query: 74  AG 75
            G
Sbjct: 593 CG 594



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 36/70 (51%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G+ H+   +  G+VF WG     +LG G   +   P+LV +L+  N+  ++ 
Sbjct: 261 LDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIAC 320

Query: 75  GRSHSAAWTA 84
           G  H+   TA
Sbjct: 321 GEFHTCVVTA 330


>gi|260792916|ref|XP_002591460.1| hypothetical protein BRAFLDRAFT_205444 [Branchiostoma floridae]
 gi|229276665|gb|EEN47471.1| hypothetical protein BRAFLDRAFT_205444 [Branchiostoma floridae]
          Length = 689

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG   +A +T  G L TFG+G  G LGHG T + +  + V AL    V  VSCG  H 
Sbjct: 404 VSCGDLFTACLTDRGILMTFGSGTNGCLGHGQTNDVQQAKIVEALLGFEVTLVSCGATHV 463

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           + + ++ + V+++G G++G+LGLGN     TPQ
Sbjct: 464 MAVTNEHE-VFSWGRGDHGRLGLGNRESYSTPQ 495



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 4/110 (3%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           VP + A  L    AA+A G  HSA +T +G  YTFG  ++ +LG+      + P+ V AL
Sbjct: 557 VPASSAPLLTTRIAAVALGTSHSAAITESGQCYTFGANNFNQLGYQKDSKDRRPQLVPAL 616

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL--GNTGL-KPTP 505
             V +  V CG   TV I  +G+ VY +G G  G+LG    NT + KP P
Sbjct: 617 EDVCISMVECGDTFTVAITTEGE-VYTWGKGSRGRLGRREENTKIPKPVP 665



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           ++CG  H   VT+   ++++G GD+GRLG G   ++  P+ V   +   V+SV CG++ +
Sbjct: 456 VSCGATHVMAVTNEHEVFSWGRGDHGRLGLGNRESYSTPQPVPIPSPHLVKSVHCGVDCS 515

Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
           + +    + +   G   + KLGL
Sbjct: 516 ILLTTDNR-LLGCGSNRHNKLGL 537



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A     +  +S G  HV+AV+N  +VF+WG     +LGLGN+ +Y  PQ V   S   
Sbjct: 445 VEALLGFEVTLVSCGATHVMAVTNEHEVFSWGRGDHGRLGLGNRESYSTPQPVPIPSPHL 504

Query: 69  IRQVSAG 75
           ++ V  G
Sbjct: 505 VKSVHCG 511



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           I  +++GT H  A++ +GQ + +G N+  QLG       R PQLV AL +  I  V  G 
Sbjct: 569 IAAVALGTSHSAAITESGQCYTFGANNFNQLGYQKDSKDRRPQLVPALEDVCISMVECGD 628

Query: 77  SHSAAWT 83
           + + A T
Sbjct: 629 TFTVAIT 635


>gi|441636292|ref|XP_003278658.2| PREDICTED: E3 ubiquitin-protein ligase HECTD3 [Nomascus leucogenys]
          Length = 865

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 517 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 576

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 577 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 632

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + G+ +  F      E  F       ++  ++ GG 
Sbjct: 633 SWSKDFPAVDSVLVKLLEV-----MEGMDKETFEFKFGKELTFTTVLSDQQVVELIPGGA 687

Query: 398 SVPLTFANRLQYYE 411
            + + + +R ++ +
Sbjct: 688 GIVVGYGDRSRFIQ 701


>gi|432094481|gb|ELK26044.1| E3 ubiquitin-protein ligase HECTD3 [Myotis davidii]
          Length = 847

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 371 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 430

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 431 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 486

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + G+ +  F      E  F       ++  ++ GG 
Sbjct: 487 SWSKDFPAVDSVLVKLLEV-----MEGMDKETFEFKFGKELTFTTVLSDQQVVELIPGGT 541

Query: 398 SVPLTFANRLQYYE 411
            + + + +R ++ +
Sbjct: 542 GIVVGYEDRSRFIQ 555


>gi|348554443|ref|XP_003463035.1| PREDICTED: probable E3 ubiquitin-protein ligase C12orf51-like [Cavia
            porcellus]
          Length = 4052

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 28/223 (12%)

Query: 215  FAQISRQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSG 267
            F Q +RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S 
Sbjct: 3662 FCQAARQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSS 3721

Query: 268  AVPLLVRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326
            ++ LL+  P+   +   N+ +YIL P  ++   + L+HF  LG L G+AIR   PLPL L
Sbjct: 3722 SLSLLLLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDL 3777

Query: 327  SPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEI----IPLECFE 381
             P  WK +V EP+    DL++ D L    ++    I+     EA   EI    + +E  E
Sbjct: 3778 LPSFWKTLVGEPLDPDQDLQEADILTYNYIKKFESINDETELEALCAEIASQHLAVESPE 3837

Query: 382  GA----------SWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
            G           + TG    + + G+ +P+ + N+   Y AAI
Sbjct: 3838 GPNKPCCRFTYLTMTGEEVELCSRGRHIPVAWENK-DIYAAAI 3879


>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1005

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 11/104 (10%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  H+A+VTS+G L+T+G+  +G LGHG+  +   P+ V +L ++ V SVSCG  H
Sbjct: 398 SVACGAWHTAMVTSSGQLFTYGSRTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWH 457

Query: 473 TVCI-----------ADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           T  I           A     ++ +GDG+ G+LG  +   K  P
Sbjct: 458 TAAIVETAIDRKFYNAKSCGKLFTWGDGDKGRLGHADNKRKLVP 501



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 7/109 (6%)

Query: 387 GRITPIVTGGQS-----VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G IT ++ G ++      P    +   +   +I+ G KH+A+VT  G ++ +GNG+ G+L
Sbjct: 264 GAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKL 323

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG-DG 489
           G    ++   P+RV +L  V V SV+C  +H  C   +   +Y +G DG
Sbjct: 324 GLKVNIDIDHPKRVESLEDVAVRSVACS-DHQTCAVTESGELYLWGIDG 371



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 49/96 (51%)

Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
           G+S  G++       +S+ +   N  + +   IA G  H AV+TS G +YT+G G  G+L
Sbjct: 535 GSSIHGQLGCPRAKDKSINVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGTNGQL 594

Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIA 477
           G G   +   P  V  L    VES++CGLN T  I 
Sbjct: 595 GLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAIC 630



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 13/96 (13%)

Query: 413 AIACGFKHSAVVT------------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
           +++CG  H+A +             S G L+T+G+GD GRLGH       VP  V  L  
Sbjct: 450 SVSCGPWHTAAIVETAIDRKFYNAKSCGKLFTWGDGDKGRLGHADNKRKLVPTCVTELID 509

Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
                VSCG   TV ++  G  VY  G   +G+LG 
Sbjct: 510 HDFIKVSCGWTLTVALSVSG-TVYTMGSSIHGQLGC 544



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +  IS+G +H   V+  G+VF WGN +  +LGL   I+   P+ V +L +  +R V+   
Sbjct: 293 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSD 352

Query: 77  SHSAAWT 83
             + A T
Sbjct: 353 HQTCAVT 359



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 39/65 (60%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + DI+ G+ HV  +++ G V+ WG  ++ QLGLG+  +   P LV  L ++ +  ++ G 
Sbjct: 564 VKDIASGSHHVAVLTSFGNVYTWGKGTNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGL 623

Query: 77  SHSAA 81
           + +AA
Sbjct: 624 NLTAA 628



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
           VP      + +    ++CG+  +  ++ +G +YT G+  +G+LG     +  +   +  L
Sbjct: 500 VPTCVTELIDHDFIKVSCGWTLTVALSVSGTVYTMGSSIHGQLGCPRAKDKSINVVLGNL 559

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +  V+ ++ G +H   +   G  VY +G G  G+LGLG+   + +P
Sbjct: 560 TRQFVKDIASGSHHVAVLTSFGN-VYTWGKGTNGQLGLGDVRDRNSP 605


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 1/110 (0%)

Query: 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           G S+P   A    Y    +AC + H+ VVT +   +TFG   YG+LGHG   +   P  +
Sbjct: 148 GYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAAL 207

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
                + V SV+CG+ HTV     G  +Y+FG  ++G+LGL     + TP
Sbjct: 208 ACFQGLGVLSVACGVYHTVVSVASG-GLYSFGKNDHGQLGLEGGESRFTP 256



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 2/86 (2%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  H+ V  ++G LY+FG  D+G+LG     +   P +  A   V VE ++CG  H
Sbjct: 217 SVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGESRFTPVQHRACTSV-VEQLACGYYH 275

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
           TV ++  G+ V AFG  +YG+LGLG+
Sbjct: 276 TVALSRAGEVV-AFGRNDYGQLGLGH 300



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 1/96 (1%)

Query: 6   GRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
           G  +P    + I+ ++ G+ H +++ + G+V+ +G N+  QLG G + +   P  V  LS
Sbjct: 307 GGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEGLS 366

Query: 66  NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLR 101
              + QV+AG  H+   T PPL     GH  +  +R
Sbjct: 367 QSFVCQVAAGFYHTLCLTGPPL-ERKAGHGSAFVVR 401



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG+ H+  ++  G +  FG  DYG+LG G   +     +V  L  + +  V+CG  HT
Sbjct: 269 LACGYYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVACGSYHT 328

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           + + D+G+ VY FG   +G+LG G
Sbjct: 329 ISLDDEGR-VYPFGRNNHGQLGTG 351



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTT-MNWKVPERVVALNKVHVESVSCGLNHTVC 475
           G +H  VVT  G L T G  + G+LGHG     + +P  V       V  V+C  +HTV 
Sbjct: 116 GSEHLVVVTEEGELQTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVV 175

Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           + D  +  + FG   YG+LG G+   +  P
Sbjct: 176 VTDDDR-TWTFGGNGYGQLGHGDHSSRSAP 204



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 35/63 (55%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+  +   G +Y FG  ++G+LG GT  +   P  V  L++  V  V+ G  HT
Sbjct: 321 VACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVCQVAAGFYHT 380

Query: 474 VCI 476
           +C+
Sbjct: 381 LCL 383



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 8/77 (10%)

Query: 7   RHIPAF----KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
           RH P      +   IV ++ G E    ++NTG+V++ G NS+ Q G+G +I+   P++V 
Sbjct: 32  RHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYNSEGQCGIG-EIDETVPEMVP 90

Query: 63  ALSNKNIRQVS---AGR 76
           +L+   +R+ S   AGR
Sbjct: 91  SLTKVTLREPSFRPAGR 107



 Score = 38.5 bits (88), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 35/63 (55%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +  ++ G  H +A+S  G+V A+G N   QLGLG++ +  +   V  L+   I QV+ G 
Sbjct: 266 VEQLACGYYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVACGS 325

Query: 77  SHS 79
            H+
Sbjct: 326 YHT 328


>gi|193786996|dbj|BAG51819.1| unnamed protein product [Homo sapiens]
          Length = 471

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 13/123 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 127 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 186

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 187 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 242

Query: 340 TFT 342
           +++
Sbjct: 243 SWS 245


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 2/94 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           +A++ G  H A VT  G +YT+G G YG+LGHG  ++  +P+ V  + K  V+SVS G  
Sbjct: 276 SALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRI-KGEVKSVSAGFY 334

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HTV +   G A++ +GDG+ GKLG  +   +  P
Sbjct: 335 HTVAVTHHG-ALFTWGDGKEGKLGHNDNAQRLIP 367



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           AA   G  H+ V+   G +++FG+GD GRLGHG   +   P  + AL      S++ G  
Sbjct: 381 AAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFA 440

Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
           H+V + D+G+ +Y +G G+ G+LG G+   +  P+
Sbjct: 441 HSVALTDQGQ-IYTWGCGKLGRLGHGSDSDEVLPR 474



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 3/102 (2%)

Query: 406 RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK--VHV 463
           R++    +++ GF H+  VT +G L+T+G+G  G+LGH       +P  V A  +  + V
Sbjct: 321 RIKGEVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPV 380

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
            +   G +HT+ +  +G+ V++FG G+ G+LG GN   + +P
Sbjct: 381 AAAQAGGSHTLVLNRRGQ-VFSFGSGDSGRLGHGNDNDQWSP 421



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 402 TFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER--VVAL 458
           TF + L+     +IA GF HS  +T  G +YT+G G  GRLGHG+  +  +P +  +++ 
Sbjct: 422 TFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISH 481

Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           + +   +V+ G  HT CI     ++   G   +G++  G+
Sbjct: 482 DTIKAIAVAAGEAHT-CIFRSEGSLITLGRVSHGRMAEGS 520



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 35/67 (52%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           +     G  H L ++  GQVF++G+    +LG GN  +   P  + AL ++    ++AG 
Sbjct: 380 VAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGF 439

Query: 77  SHSAAWT 83
           +HS A T
Sbjct: 440 AHSVALT 446



 Score = 42.0 bits (97), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           +S G  H  AV++TG V+ WG     QLG G+ ++   PQ V  +  + ++ VSAG  H+
Sbjct: 278 LSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGE-VKSVSAGFYHT 336

Query: 80  AAWT 83
            A T
Sbjct: 337 VAVT 340



 Score = 39.3 bits (90), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A ++   V I+ G  H +A+++ GQ++ WG     +LG G+  +   P+ +  +S+  
Sbjct: 424 LSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDT 483

Query: 69  IR--QVSAGRSHS 79
           I+   V+AG +H+
Sbjct: 484 IKAIAVAAGEAHT 496


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 14/106 (13%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A++ CG  H+A+VTS G L+TFG+G +G LGHG   N   P+ V +L  +   +V+CG+ 
Sbjct: 390 ASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGVW 449

Query: 472 HTVCIAD-----------KGKAVYAFGDGEYGKLGLGNTG--LKPT 504
           HT  + +            GK ++ +GDG+  +LG G+    LKPT
Sbjct: 450 HTAAVVEVIVTQSSSSVSSGK-LFTWGDGDKNRLGHGDKEPRLKPT 494



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           IACG  H+  VT  G +YT+G+G +  G LGHGT ++  +P+R+   L  + V SV+CG 
Sbjct: 337 IACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVASVTCGP 396

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  +   G+ ++ FGDG +G LG GN
Sbjct: 397 WHTALVTSTGQ-LFTFGDGTFGVLGHGN 423



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACGF+H+A+VT  G ++T+G    GRLGHG   +   P  V +L    V+ ++CG  HT
Sbjct: 285 IACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDFIACGEFHT 344

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             +   G+ +Y +GDG +  G LG G
Sbjct: 345 CAVTMAGE-IYTWGDGMHYAGLLGHG 369



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   +YT+G G  GRLGHG   + K P  V AL   HV+ ++CG N++
Sbjct: 559 IACGAYHVAVLTSRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACGANYS 618

Query: 474 VCIA 477
             I 
Sbjct: 619 AAIC 622



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           IACG   +  +T++G+++T G+  YG+LG+    + KVP  V   L+   VE ++CG  H
Sbjct: 507 IACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PYADGKVPCLVEDKLSGESVEEIACGAYH 565

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +  + + VY +G G  G+LG G+   + TP
Sbjct: 566 VAVLTSRNE-VYTWGKGANGRLGHGDGEDRKTP 597



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)

Query: 413 AIACGFKHSAVVTS-----------NGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A+ACG  H+A V             +G L+T+G+GD  RLGHG       P  V AL   
Sbjct: 443 AVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDF 502

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
           +   ++CG + TV +   G  V+  G   YG+LG
Sbjct: 503 NFHKIACGHSLTVGLTTSGH-VFTMGSTVYGQLG 535



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 42/65 (64%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I+ G  HV  +++  +V+ WG  ++ +LG G+  + + P LV AL +K+++ ++ G 
Sbjct: 556 VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACGA 615

Query: 77  SHSAA 81
           ++SAA
Sbjct: 616 NYSAA 620



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 34/64 (53%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I+ G  H   V+  G+VF WG  S  +LG G   +  +P+LV +L+   +  ++ G  H+
Sbjct: 285 IACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDFIACGEFHT 344

Query: 80  AAWT 83
            A T
Sbjct: 345 CAVT 348



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 38/70 (54%)

Query: 12  FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
            + + +  ++ G  H   V++TGQ+F +G+ +   LG GN+ N   P+ V +L+      
Sbjct: 384 LEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIA 443

Query: 72  VSAGRSHSAA 81
           V+ G  H+AA
Sbjct: 444 VACGVWHTAA 453


>gi|432862269|ref|XP_004069771.1| PREDICTED: RCC1 domain-containing protein 1-like [Oryzias latipes]
          Length = 385

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 22/171 (12%)

Query: 356 RAIRDIHLSGVTEANFPEIIPLECF------EGASWTGRIT-----------PIVTGG-- 396
           R  RD+ +S  +      +  +EC+      E  SWT  I            P+V GG  
Sbjct: 89  RGCRDVFIS-ESHLTLAFLDRVECWDLQSSDETPSWTMGIDTQSKSSAAVNLPLVPGGYI 147

Query: 397 QSVPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
            S P  F +   + +A ++A G +H  ++T+ G +YT+G G +G+LGHG  +  + P  V
Sbjct: 148 ASKPPFFHSLSPHMQAKSLALGGEHVILLTATGAVYTWGQGSHGQLGHGGLLPEEEPRTV 207

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            AL  + + SVS G  H+VCI+D G  +Y +G  E G+LGL +  L+ T +
Sbjct: 208 EALWGMKMSSVSAGGWHSVCISDAGD-LYVWGWNESGQLGLPSQRLRKTSE 257



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV--VALNKVHVESVSCG 469
           ++CG +H+A VT++G LYT+G G+YG+LGH +  +   P+RV      ++HV  V CG
Sbjct: 300 VSCGSRHTAAVTTSGDLYTWGWGEYGQLGHQSFSSSDEPQRVEFFRAQQLHVVGVVCG 357



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           ++    +++G EHV+ ++ TG V+ WG  S  QLG G  +   EP+ V AL    +  VS
Sbjct: 160 HMQAKSLALGGEHVILLTATGAVYTWGQGSHGQLGHGGLLPEEEPRTVEALWGMKMSSVS 219

Query: 74  AGRSHS 79
           AG  HS
Sbjct: 220 AGGWHS 225


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT+ G LYT+G+G +  G LGHGT +   +P R+   L  + +  VSCG 
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGT 193

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            HT  I   G+ ++ FGDG +G LG GN      P+
Sbjct: 194 WHTALITSMGQ-LFTFGDGSFGVLGHGNVKSISCPR 228



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 12/105 (11%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           A ++CG  H+A++TS G L+TFG+G +G LGHG   +   P  V +L+ +   +V+CG+ 
Sbjct: 187 AYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVW 246

Query: 472 HTVCIAD----------KGKAVYAFGDGEYGKLGLGN--TGLKPT 504
           HT  I +              ++ +GDG+  +LG G+    LKPT
Sbjct: 247 HTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPT 291



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           + CG +H+++VT NG ++T+G    GRLGHGT  +   P  V +L   +++ V+CG  HT
Sbjct: 82  VDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGEFHT 141

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
             +   G+ +Y +GDG +  G LG G
Sbjct: 142 CAVTTTGE-LYTWGDGTHNVGLLGHG 166



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 37/64 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  H AV+TS   ++T+G G  GRLGHG   + KVP  V AL    V  ++CG N T
Sbjct: 355 IACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACGANFT 414

Query: 474 VCIA 477
             I 
Sbjct: 415 AAIC 418



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 12/102 (11%)

Query: 413 AIACGFKHSAVVT-----------SNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV 461
           A+ACG  H+A +            S G L+T+G+GD  RLGHG       P  V +L   
Sbjct: 240 AVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY 299

Query: 462 HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
               V+CG + TV +   GK V+  G+  YG+LG  N+  +P
Sbjct: 300 DFYRVACGHSLTVGLTTSGK-VWTMGNSVYGQLGNPNSDGRP 340



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 41/66 (62%)

Query: 16  HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
           H++ I+ G+ HV  +++  +VF WG  ++ +LG G+  + + P  V AL ++ +R ++ G
Sbjct: 351 HVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACG 410

Query: 76  RSHSAA 81
            + +AA
Sbjct: 411 ANFTAA 416



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  +  G  H   V+  G+VF WG +S  +LG G + +   P+LV +L+  NI  V+ 
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVAC 136

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 137 GEFHTCAVT 145



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 6/108 (5%)

Query: 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN--WKVPERVVA 457
           P   A+ + Y    +ACG   +  +T++G ++T GN  YG+LG+  +      V +++ +
Sbjct: 290 PTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVEDKIAS 349

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
               HV  ++CG  H   +  + + V+ +G G  G+LG G+   +  P
Sbjct: 350 ---EHVLQIACGSYHVAVLTSRSE-VFTWGKGANGRLGHGDVEDRKVP 393


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           IACG  H+ VVT++G LY +G+G Y  G LGHGT ++  +P+RV   L  + V SV+CG 
Sbjct: 282 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGS 341

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            H+      GK ++ FGDG +G LG G+
Sbjct: 342 WHSALTMSSGK-LFTFGDGTFGSLGHGD 368



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 9/102 (8%)

Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
           ++ACG  HSA+  S+G L+TFG+G +G LGHG   +   P+ V AL+      V+CG+ H
Sbjct: 336 SVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWH 395

Query: 473 TVCIAD-KGKA--------VYAFGDGEYGKLGLGNTGLKPTP 505
           +  I +  G+A        ++ +GDG+  +LG G+   K  P
Sbjct: 396 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP 437



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 40/64 (62%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I+CG  H A +TS   +YT+G G  GRLGHG+  + K P  V AL   HV+S+SCG N T
Sbjct: 503 ISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFT 562

Query: 474 VCIA 477
            CI 
Sbjct: 563 TCIC 566



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 3/86 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG +H  + T  G ++T+G    GRLGHGT  +   P+ V +L   +VE ++CG  HT
Sbjct: 230 IACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHT 289

Query: 474 VCIADKGKAVYAFGDGEY--GKLGLG 497
            C+      +Y +GDG Y  G LG G
Sbjct: 290 -CVVTASGDLYDWGDGSYNAGLLGHG 314



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 11/92 (11%)

Query: 414 IACGFKHSAVV-------TSNGY---LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHV 463
           +ACG  HSA +       ++N     L+T+G+GD  RLGHG      VP  V AL   + 
Sbjct: 389 VACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNF 448

Query: 464 ESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
             V+CG + TV +A  G  V+  G    G+LG
Sbjct: 449 HQVACGHSMTVALATSGH-VFTMGSSNNGQLG 479



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
           +ACG   +  + ++G+++T G+ + G+LG+    + K P  V   L    VE +SCG NH
Sbjct: 451 VACGHSMTVALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQDKLGNELVEEISCGSNH 509

Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
              +  + + VY +G G  G+LG G+   K  P
Sbjct: 510 VAALTSRSE-VYTWGMGANGRLGHGSVEDKKKP 541



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 41/62 (66%)

Query: 14  NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS 73
           N  + +IS G+ HV A+++  +V+ WG  ++ +LG G+  + ++P LV AL +++++ +S
Sbjct: 497 NELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSIS 556

Query: 74  AG 75
            G
Sbjct: 557 CG 558



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query: 20  ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
           I+ G+ H+   +  G+VF WG     +LG G   +   P+LV +L+  N+  ++ G  H+
Sbjct: 230 IACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHT 289

Query: 80  AAWTA 84
              TA
Sbjct: 290 CVVTA 294


>gi|397476465|ref|XP_003809620.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Pan paniscus]
          Length = 343

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 8/108 (7%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           +   +   IV ++VG  H LAV+++GQV+AWG+N   Q G G     R+P LV  L  + 
Sbjct: 45  VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 104

Query: 69  IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQDI 108
           I +V+ G SHS AWT   +     H P        P  +  LG+P D+
Sbjct: 105 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTTRDPLGASYLGVPSDV 152



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 434 GNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGK 493
           G GDY RLGH + ++ + P+ V  L    +  V+ G  H + + D G+ VYA+GD ++G+
Sbjct: 24  GKGDYFRLGHRSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQ-VYAWGDNDHGQ 82

Query: 494 LGLGNTGL--KPT 504
            G G T +  KPT
Sbjct: 83  QGNGTTTVNRKPT 95



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +A G  H   VT +G +Y +G+ D+G+ G+GTT   + P  V  L    +  V+CG +H+
Sbjct: 56  VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 115

Query: 474 V 474
           V
Sbjct: 116 V 116


>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
 gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
          Length = 228

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 60/94 (63%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+  +T +G +Y+FG G +G LGHGTT +   P  V +L  + +  ++CG NH+
Sbjct: 40  VACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHS 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTG--LKPTP 505
             +  +G+ ++++G G+YG+LG G+    L+P P
Sbjct: 100 CALTVEGQ-LFSWGRGKYGQLGCGSVENHLQPVP 132



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 5/99 (5%)

Query: 397 QSVPLT-FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           Q VP+T  ++RL      + CG  ++  + S+G L+++G+G +G+ GHGT  N  VP+ V
Sbjct: 129 QPVPVTALSDRLL---TQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLV 185

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL 494
            +L   ++   S G  H V +   G  VYA+GD E G++
Sbjct: 186 CSLENDNIVQASAGARHAVALT-SGGGVYAWGDNEQGQV 223



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  HS  +T  G L+++G G YG+LG G+  N   P  V AL+   +  V CG ++T
Sbjct: 92  IACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYT 151

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           + I   G+ ++++G G +G+ G G
Sbjct: 152 MAIDSDGQ-LFSWGHGHWGQTGHG 174



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A  +  +  +  G ++ +A+ + GQ+F+WG+    Q G G Q N   P+LV +L N N
Sbjct: 133 VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDN 192

Query: 69  IRQVSAGRSHSAAWTA 84
           I Q SAG  H+ A T+
Sbjct: 193 IVQASAGARHAVALTS 208



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + +   + IV I+ G  H  A++  GQ+F+WG     QLG G+  N+ +P  V ALS++ 
Sbjct: 81  VDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRL 140

Query: 69  IRQVSAGRSHSAA 81
           + QV  G  ++ A
Sbjct: 141 LTQVVCGADYTMA 153


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 60/94 (63%), Gaps = 3/94 (3%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           +ACG  H+  +T +G +Y+FG G +G LGHGTT +   P  V +L  + +  ++CG NH+
Sbjct: 40  VACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHS 99

Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTG--LKPTP 505
             +  +G+ ++++G G+YG+LG G+    L+P P
Sbjct: 100 CALTVEGQ-LFSWGRGKYGQLGCGSVENHLQPVP 132



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 5/99 (5%)

Query: 397 QSVPLT-FANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV 455
           Q VP+T  ++RL      + CG  ++  + S+G L+++G+G +G+ GHGT  N  VP+ V
Sbjct: 129 QPVPVTALSDRLL---TQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLV 185

Query: 456 VALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKL 494
            +L   ++   S G  H V +   G  VYA+GD E G++
Sbjct: 186 CSLENDNIVQASAGARHAVALT-SGGGVYAWGDNEQGQV 223



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           IACG  HS  +T  G L+++G G YG+LG G+  N   P  V AL+   +  V CG ++T
Sbjct: 92  IACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYT 151

Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
           + I   G+ ++++G G +G+ G G
Sbjct: 152 MAIDSDGQ-LFSWGHGHWGQTGHG 174



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + A  +  +  +  G ++ +A+ + GQ+F+WG+    Q G G Q N   P+LV +L N N
Sbjct: 133 VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDN 192

Query: 69  IRQVSAGRSHSAAWTA 84
           I Q SAG  H+ A T+
Sbjct: 193 IVQASAGARHAVALTS 208



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%)

Query: 9   IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
           + +   + IV I+ G  H  A++  GQ+F+WG     QLG G+  N+ +P  V ALS++ 
Sbjct: 81  VDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRL 140

Query: 69  IRQVSAGRSHSAA 81
           + QV  G  ++ A
Sbjct: 141 LTQVVCGADYTMA 153


>gi|410928126|ref|XP_003977452.1| PREDICTED: probable E3 ubiquitin-protein ligase HECTD4-like, partial
            [Takifugu rubripes]
          Length = 4312

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 145/336 (43%), Gaps = 35/336 (10%)

Query: 105  PQDIPD-HYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLV 163
            P D+ D     L N+P+  +R R  LL   ++ +      LPL  + Q        + L+
Sbjct: 3929 PGDVADPRVACLLNEPVESLRLRFALLQSLNNTLENF--FLPLVELRQTQTYRNSIAALL 3986

Query: 164  HPSLRPLFAPRVYTLPLVRSVGKTML-VGKNFGPSVTVRRLTT---KSKQTVKPIFAQIS 219
              +   +F     T+ + R +  T+     +  P +T+  L     + + +    F Q +
Sbjct: 3987 CEAKGFIFYDTKVTV-MNRVLNATVQRTADHAAPEITLDPLEIVGGEIRSSENSYFCQAA 4045

Query: 220  RQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLL 272
            RQ+  +  S L +       P+ A+ ++  GE      G F   + ++C EL S A+ LL
Sbjct: 4046 RQLACVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSALSLL 4105

Query: 273  VRTPNGVADTGYNRDRYILNP-DLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
            +  P+  A+   N+ +YIL P  +S + + L+HF   G L G+ IR   PLPL L    W
Sbjct: 4106 LPCPSAAAN--RNKGKYILTPCPISYAEEQLLHF--FGQLLGIGIRADVPLPLDLLGSFW 4161

Query: 332  KLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII--------------P 376
            K +V +P+    DL++ D L    ++   ++      EA   EI               P
Sbjct: 4162 KGLVGDPLDPEQDLQEADVLTYNYVKKFENVTDDAELEALCAEISSQHYSGESPDSPGRP 4221

Query: 377  LECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEA 412
               F   + TG    +  GG+S+ +++ N+  Y  A
Sbjct: 4222 CCTFTYITMTGEEVELCRGGRSLAVSWENKDVYARA 4257


>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
 gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
          Length = 1711

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 8/92 (8%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN---WKVPERV--VALNKVHVESV 466
           A ++CG +H A++T  G +YT+G    GRLGHG  +    +  P RV  +++ +V V +V
Sbjct: 868 AVVSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVPPMRVETLSIQRVQVMAV 926

Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
           +CG  HT+ + D G  VYA+G   YG+LGLG+
Sbjct: 927 ACGQEHTLALCDNG--VYAWGSSTYGQLGLGD 956



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 2/74 (2%)

Query: 414  IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
            ++ G+ H+AV+T +G ++TFG G +G+LGHG T    +P+RV  +    V  V+CGL HT
Sbjct: 1027 VSTGYAHTAVLTRSGEVFTFGCGLHGQLGHGATDKVSIPQRVQGIMG-KVAQVACGLFHT 1085

Query: 474  VCIADKGKAVYAFG 487
            V +    + VY FG
Sbjct: 1086 VVVT-SSQQVYTFG 1098



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 3/110 (2%)

Query: 397  QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
            Q+ P         +  A+A G  HSA +   G ++ +G G +G+LG G   N   P  V 
Sbjct: 960  QTHPTLVTQLKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPHLVA 1019

Query: 457  ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
            A+       VS G  HT  +   G+ V+ FG G +G+LG G T     PQ
Sbjct: 1020 AVQN--AVQVSTGYAHTAVLTRSGE-VFTFGCGLHGQLGHGATDKVSIPQ 1066



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 413  AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
            A+ACG +H+  +  NG +Y +G+  YG+LG G       P  V  L  V   +V+ G  H
Sbjct: 925  AVACGQEHTLALCDNG-VYAWGSSTYGQLGLGDWDRQTHPTLVTQLKDVFCVAVATGQYH 983

Query: 473  TVCIADKGKAVYAFGDGEYGKLGLGN 498
            +  +  +G+ V+ +G G +G+LG GN
Sbjct: 984  SAALDGEGR-VWMWGWGVHGQLGQGN 1008



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 11  AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIR 70
           + + + ++ ++ G EH LA+ + G V+AWG+++  QLGLG+      P LV  L +    
Sbjct: 917 SIQRVQVMAVACGQEHTLALCDNG-VYAWGSSTYGQLGLGDWDRQTHPTLVTQLKDVFCV 975

Query: 71  QVSAGRSHSAA 81
            V+ G+ HSAA
Sbjct: 976 AVATGQYHSAA 986



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 9    IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
            +   K++  V ++ G  H  A+   G+V+ WG     QLG GN  N  +P LV A+  +N
Sbjct: 966  VTQLKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPHLVAAV--QN 1023

Query: 69   IRQVSAGRSHSAAWT 83
              QVS G +H+A  T
Sbjct: 1024 AVQVSTGYAHTAVLT 1038


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG  H+A+V+S G L+TFG+G +G LGHG   N  +P+ V +L  +     +CG+ 
Sbjct: 390 SSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIW 449

Query: 472 HTVCIAD------------KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           HT  + +             GK ++ +GDG+  +LG G+   K  P
Sbjct: 450 HTAAVVEVIVGYSSATSCSSGK-LFTWGDGDKYRLGHGDKEQKLVP 494



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 2/84 (2%)

Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
           ++IACG +H+A+VT  G ++ +G    GRLGHG  ++   P+ V AL  V+ E V+CG  
Sbjct: 283 SSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNTELVACGDF 342

Query: 472 HTVCIADKGKAVYAFG-DGEYGKL 494
           HT  +   G+ +Y +G D + G L
Sbjct: 343 HTCAVTLSGE-LYTWGADAQSGGL 365



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 4/88 (4%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDY--GRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
           +ACG  H+  VT +G LYT+G      G +GH   ++  +P+R+ + L  V + S++CG 
Sbjct: 337 VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSIACGA 396

Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
            HT  ++  G+ ++ FGDG +G LG G+
Sbjct: 397 WHTALVSSAGQ-LFTFGDGTFGVLGHGD 423



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 3/108 (2%)

Query: 399 VPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA- 457
           VP   A  + Y    +ACG   +  +T++G ++T G+  YG+LG+    + KVP  V   
Sbjct: 493 VPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGN-PKADGKVPGMVDGE 551

Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
           L +  VE + CG +H   ++ K + +Y +G G  G+LG G+   +  P
Sbjct: 552 LARTFVEEIGCGAHHVAALSSKTE-IYTWGKGANGRLGHGDVEDRTAP 598



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 415 ACGFKHSAVV------------TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH 462
           ACG  H+A V             S+G L+T+G+GD  RLGHG      VP  V AL   +
Sbjct: 445 ACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYN 504

Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
              V+CG + TV +   G+ V+  G   YG+LG
Sbjct: 505 FRQVACGHSLTVALTTSGR-VFTMGSTIYGQLG 536



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 35/64 (54%)

Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
           I CG  H A ++S   +YT+G G  GRLGHG   +   P  V AL    V++V+CG + T
Sbjct: 560 IGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFT 619

Query: 474 VCIA 477
             I 
Sbjct: 620 AVIC 623



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 36/69 (52%)

Query: 15  IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
           + +  I+ G+ H   V+  G VF WG     +LG G  ++  EPQLV AL+  N   V+ 
Sbjct: 280 LDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNTELVAC 339

Query: 75  GRSHSAAWT 83
           G  H+ A T
Sbjct: 340 GDFHTCAVT 348



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 38/64 (59%)

Query: 17  IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
           + +I  G  HV A+S+  +++ WG  ++ +LG G+  +   P LV AL +K ++ V+ G 
Sbjct: 557 VEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGS 616

Query: 77  SHSA 80
           S +A
Sbjct: 617 SFTA 620



 Score = 42.0 bits (97), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 12/89 (13%)

Query: 7   RHIPAFKNIHIVDISVGTEHVLAV------------SNTGQVFAWGNNSDAQLGLGNQIN 54
           + + + K +  V  + G  H  AV             ++G++F WG+    +LG G++  
Sbjct: 431 KEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQ 490

Query: 55  YREPQLVLALSNKNIRQVSAGRSHSAAWT 83
              P  V AL + N RQV+ G S + A T
Sbjct: 491 KLVPTCVAALVDYNFRQVACGHSLTVALT 519


>gi|296488887|tpg|DAA31000.1| TPA: HECT domain containing 3 [Bos taurus]
 gi|440907289|gb|ELR57449.1| E3 ubiquitin-protein ligase HECTD3 [Bos grunniens mutus]
          Length = 861

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
           D R P R    W+ K + EG  D GG F D++ +M  EL   +      +P  VRT N  
Sbjct: 517 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 576

Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
             TG  RD Y+ NP    S +    ++++G L G A+R K+ L L L   VWK +  E V
Sbjct: 577 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 632

Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
           +++ D    D++  + L       + G+ +  F      E  F       ++  ++ GG 
Sbjct: 633 SWSKDFPAVDSVLVKLLEV-----MEGMDKETFEFKFGKELTFTTVLSDQQVVELIPGGS 687

Query: 398 SVPLTFANRLQYYE 411
            + + + +R ++ +
Sbjct: 688 GIVVGYEDRSRFIQ 701


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.138    0.422 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,835,880,337
Number of Sequences: 23463169
Number of extensions: 398094163
Number of successful extensions: 969560
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3731
Number of HSP's successfully gapped in prelim test: 2560
Number of HSP's that attempted gapping in prelim test: 905831
Number of HSP's gapped (non-prelim): 51532
length of query: 506
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 359
effective length of database: 8,910,109,524
effective search space: 3198729319116
effective search space used: 3198729319116
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)