BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15270
(506 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/467 (51%), Positives = 312/467 (66%), Gaps = 22/467 (4%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
+ IP + I D++VG EH LA+++ G V+AWG+NS+ QLGLG+ + REP LV L
Sbjct: 4283 QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQG 4342
Query: 67 KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
KN+RQ+SAGR HSAAWTAPP+PP PG S L+LGLP +P YG L+ + +RAR
Sbjct: 4343 KNVRQISAGRCHSAAWTAPPVPPRAPG--VSVPLQLGLPDTVPPQYGALREVSIHTVRAR 4400
Query: 127 LKLLNRFSDLIYQVVRLLPLGNVDQDWV-QCTPYSW-LVHPSLRPLFAPRVYTLPLVRSV 184
L+LL FSDL+Y RLL L +Q+ +W +V LRPL APRVYTLP+VRS+
Sbjct: 4401 LRLLYHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSI 4460
Query: 185 GKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGE 244
GKTM+ GKN+GP +TV+R++T+ ++ KPIF QI+RQVVK+ SDLRLPSRAWKVKL+GE
Sbjct: 4461 GKTMVQGKNYGPQITVKRISTRGRK-CKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGE 4519
Query: 245 GADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMH 304
GADDAGGVFDDTITEMC EL +G V LL+ +PN A+ GYNRDR++ NP + LM
Sbjct: 4520 GADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPSACLD-EHLMQ 4578
Query: 305 FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
FKFLGIL GVAIRTKKPL L L+PLVWK + P+T DLE+ D LY Q+L +I I S
Sbjct: 4579 FKFLGILMGVAIRTKKPLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDS 4638
Query: 365 GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVV 424
G+TE +F E+IPL+ F G S G++ PI+ GG S+PLTF+NR +Y E AI
Sbjct: 4639 GITEESFHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIE--------- 4689
Query: 425 TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGL 470
Y D M+W VP +++ L +E + CG+
Sbjct: 4690 ------YRLHEMDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGM 4730
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 73/93 (78%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
++CGFKHSAVVTS+G L+TFGNGDYGRLG G T N K+PERV AL + V+CGLNHT
Sbjct: 4139 MSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHT 4198
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
+ ++ G V+AFGDG+YGKLGLGN+ K +PQ
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4231
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
++ G++HSA VT +G LYT+G GD+GRLGHG + + +P V ++ +V VSCG +H
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNT 499
T+ ++ G+ V++FG G+ GKLG G+T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDT 599
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNK 67
I IVD+S+G H LA+S+ +V+AWGNNS Q G GN +P+ V L
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI 718
Query: 68 NIRQVSAGRSHSAAWTAPP 86
I+Q+SAG SHS AWTA P
Sbjct: 719 AIQQISAGTSHSLAWTALP 737
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ACG + S +T +G++YTFG L G N P+++ L V +E V+ G HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4303
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
+ +A G VYA+G G+LGLG+T
Sbjct: 4304 LALASNGD-VYAWGSNSEGQLGLGHT 4328
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
H+ T+ G ++++G+GDYG+LGHG + K P+ + L V VS G H+ + +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTP 505
G+ +Y +G+G++G+LG G++ + P
Sbjct: 529 DGE-LYTWGEGDFGRLGHGDSNSRNIP 554
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446
GR + G++V + A + CG + V+ +NG + G G YGRLG G +
Sbjct: 4005 GRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4064
Query: 447 MNWKVPERVVALNKVHVESV--SCGLN-HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKP 503
+ V + AL V + SCG + H++ + + G+ V+++GDG+YGKLG GN+ +
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQR 4123
Query: 504 TPQ 506
P+
Sbjct: 4124 RPR 4126
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 387 GRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYL-YTFGNGDYGRLGHGT 445
GR+ T + +P Y +ACG H+ V+++G + + FG+GDYG+LG G
Sbjct: 4164 GRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223
Query: 446 TMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
+ P+++ L + ++ V+CG +V + G VY FG
Sbjct: 4224 STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFG 4264
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R I A + +V +S G +H V++ G++F +GN +LGLGN N + P+ V AL
Sbjct: 4126 RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185
Query: 67 KNIRQVSAGRSHSAAWTA 84
I QV+ G +H+ A +A
Sbjct: 4186 YQIGQVACGLNHTLAVSA 4203
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 408 QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-----ALNKVH 462
Q EA C F V++++G + G G YGRLG G + N +++ ++ KV
Sbjct: 406 QTIEAGQYCTF----VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 461
Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
S G HT+ +G+ V+++GDG+YGKLG GN+ + P+
Sbjct: 462 SSKGSDG--HTLAFTTEGE-VFSWGDGDYGKLGHGNSSTQKYPK 502
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 414 IACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
++CG H+ ++ +G +++FG GD G+LGHG T P+ + AL + + V G
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS 625
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN---TGLKP 503
++ + G+ VYA+G G LG G+ T L+P
Sbjct: 626 SLALTSTGQ-VYAWGCG--ACLGCGSSEATALRP 656
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 21 SVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
S G++ H +A++ +G+VF+WG+ +LG GN R P+ + AL + + Q+S G HS
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146
Query: 80 AAWTA 84
A T+
Sbjct: 4147 AVVTS 4151
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 13 KNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIR 70
++I V S G++ H LA + G+VF+WG+ +LG GN + P+L+ L K +
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514
Query: 71 QVSAGRSHSAAWT 83
VSAG HSAA T
Sbjct: 515 CVSAGYRHSAAVT 527
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 1 MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQ-VFAWGNNSDAQLGLGNQINY 55
+ TS + +P A + I ++ G H LAVS G V+A+G+ +LGLGN
Sbjct: 4168 LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4227
Query: 56 REPQLVLALSNKNIRQVSAGRSHSAAWT 83
PQ + L I++V+ G S A T
Sbjct: 4228 SSPQKIDVLCGIGIKKVACGTQFSVALT 4255
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
+V +S G H AV+ G+++ WG +LG G+ + P LV +S N+ +VS G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGS 570
Query: 77 SHSAA 81
SH+ A
Sbjct: 571 SHTIA 575
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+A G +H+ + SNG +Y +G+ G+LG G T + + P V L +V +S G H+
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHS 4355
Query: 474 V 474
Sbjct: 4356 A 4356
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVESVSCGLNH 472
++ G H ++ + +Y +GN G+ G G +T P++V L+ + ++ +S G +H
Sbjct: 670 VSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSH 729
Query: 473 TV 474
++
Sbjct: 730 SL 731
Score = 32.3 bits (72), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 21 SVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
S+ T VS T +V+ WG+NS QL G Q +P+L + S+ + + AG+
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQ 412
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 191/365 (52%), Gaps = 34/365 (9%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
+ + A + I+ I+ G+ H +A S++G+V+ WG+N + QLG G + P+LV AL
Sbjct: 4338 KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQG 4397
Query: 67 KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
K+I +V+ G +H+ A + L S RL + P Y +++ + AR
Sbjct: 4398 KHIVKVTCGSAHTLALSTSQL-----------SERLRPLPNPPLEYDLVRDLAPEALHAR 4446
Query: 127 LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGK 186
L LL+ FS+L+ + +LP+ L +L+ + + + +
Sbjct: 4447 LILLHHFSELVCPCLAMLPISGD------------LSLGALKDVLVYNIKEAAFRKVIQT 4494
Query: 187 TMLVGKNFGPSVTVRRLTTKSKQT----------VKPIFAQISRQVVKMKGSDLRLPSRA 236
TM+ K GP + + R+ K + +K +F Q+ +++ + L LP R
Sbjct: 4495 TMVRDKQHGPVIELNRIQVKRSRNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHRV 4554
Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
WKVK +GE DD GG + ++I EMC EL +G+VPLL+ TPNG + G NRD ++L+P LS
Sbjct: 4555 WKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLS 4614
Query: 297 ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
LQ M F+FLG+L G+A+RT PL + L+ VW+ + E + TDL + D Y L
Sbjct: 4615 SVLQMNM-FRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLL 4673
Query: 357 AIRDI 361
IR++
Sbjct: 4674 CIRNM 4678
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 101/190 (53%), Gaps = 15/190 (7%)
Query: 324 LPLSPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE---- 378
LP + +VW L +E + + ++Q++ +R IH++G +++ F I+ +
Sbjct: 2984 LPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLF--IVSQDGKVY 3041
Query: 379 -CFEGASWTGRITPIVTGGQSVPLTFANRLQYY--EAAIACGFKHSAVVTSNGYLYTFGN 435
C EG + GR+ VT +P QY + A+ G KH+ +T +G ++++G
Sbjct: 3042 ACGEGTN--GRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGE 3099
Query: 436 GDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
G+ G+LGHG P V AL + V+CG +H+ I+ +G+ +Y +G GEYG+LG
Sbjct: 3100 GEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGE-LYTWGLGEYGRLG 3158
Query: 496 LGN--TGLKP 503
G+ T LKP
Sbjct: 3159 HGDNTTQLKP 3168
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
+ACG HSA ++S G LYT+G G+YGRLGHG P+ V AL V V+CG
Sbjct: 3130 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDA 3189
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
T+ + + G AV+++GDG++GKLG G + TP
Sbjct: 3190 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPH 3223
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 15/118 (12%)
Query: 396 GQSVPLTFANRLQYYE------------AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH 443
G+ L NR+ Y A IACG HSA +T++G++ T+G G YGRLGH
Sbjct: 4163 GEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 4222
Query: 444 GTTMNWKVPERVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
G + + P+ V AL ++CG T+CI D V+++GDG+YGKLG G +
Sbjct: 4223 GDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN-VWSWGDGDYGKLGRGGS 4279
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
T ++VP A Q+ ++ CG +SA +T G L T+G G Y RLGHG + + +P
Sbjct: 653 THARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPT 712
Query: 454 RVVALNKVHVESVSCGLN--HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
VVAL+ V V+ G H++ + +G V+A+GDG+YGKLG GN
Sbjct: 713 LVVALSDHMVVDVALGSGDAHSLALTSEG-LVFAWGDGDYGKLGNGNC 759
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ CG + S +T +G +YT+G GD+ RLGHG+ + + P++V AL + S++ G H
Sbjct: 4299 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4358
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
V +D G+ VY +GD + G+LG G
Sbjct: 4359 VACSDSGE-VYTWGDNDEGQLGDGT 4382
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
+ A+ G KH +T+ G +Y +G G+ G+LGHG M++ P+ V LN + V ++CG
Sbjct: 4138 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGS 4197
Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT 499
H+ I G V +G G YG+LG G++
Sbjct: 4198 AHSAAITASGH-VLTWGKGRYGRLGHGDS 4225
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
I CG + S +T G ++T+G GDY RLGHG + + P+ + L V V+ G H
Sbjct: 3236 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHC 3295
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+ + D G+ VYA+GD ++G+ G GNT + P
Sbjct: 3296 LAVTDAGQ-VYAWGDNDHGQQGSGNTFVNKKP 3326
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
I + ++ ++VG H LAV++ GQV+AWG+N Q G GN ++P LV+ L
Sbjct: 3277 IGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF 3336
Query: 69 IRQVSAGRSHSAAWTAP 85
+ +V+ G SHS AW P
Sbjct: 3337 VNRVACGSSHSIAWGLP 3353
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 8 HIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS 65
+P + + ++V G +H LA++ G+VF+WG D +LG GN+ +P+LV AL
Sbjct: 3064 QLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALR 3123
Query: 66 NKNIRQVSAGRSHSAA 81
K IR V+ G SHSAA
Sbjct: 3124 AKKIRDVACGSSHSAA 3139
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%)
Query: 15 IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
+ V ++ G +H LA++ G+V+AWG D +LG GN+++Y P+LV L+ ++ ++
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIAC 4195
Query: 75 GRSHSAAWTA 84
G +HSAA TA
Sbjct: 4196 GSAHSAAITA 4205
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 416 CGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVC 475
C +H + SN Y++G G+ RLGHG T VP ++ AL + V+SV CG +++
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 682
Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
I G + +G G Y +LG GN+ + P
Sbjct: 683 ITCGGN-LLTWGRGTYARLGHGNSDDRSLP 711
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 407 LQYYEAAIACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE 464
L Y IACG + +T + ++++G+GDYG+LG G + K+P ++ +L + V
Sbjct: 4238 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVV 4297
Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
V CG +V + G AVY +G G++ +LG G+
Sbjct: 4298 KVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGS 4330
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 414 IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
+ACG + + +T +G ++++G+GD+G+LG G + P + L+ + V + CG
Sbjct: 3182 VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQ 3241
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
++ + G+ V+ +G G+Y +LG G PQ
Sbjct: 3242 FSLALTRAGE-VWTWGKGDYYRLGHGGDQHVRKPQ 3275
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
+IA G H + +G +YT+G+ D G+LG GT + P V AL H+ V+CG H
Sbjct: 4350 SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 4409
Query: 473 TVCIA 477
T+ ++
Sbjct: 4410 TLALS 4414
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R + A + I D++ G+ H A+S+ G+++ WG +LG G+ +P+LV AL+
Sbjct: 3117 RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAG 3176
Query: 67 KNIRQVSAG 75
+ + QV+ G
Sbjct: 3177 RRVVQVACG 3185
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+A G H VT G +Y +G+ D+G+ G G T K P V+ L+ V V V+CG +H+
Sbjct: 3288 VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 3347
Query: 474 V 474
+
Sbjct: 3348 I 3348
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 8 HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
I I +V I G + LA++ G+V+ WG +LG G + R+PQ + L +
Sbjct: 3224 EIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR 3283
Query: 68 NIRQVSAGRSHSAAWT 83
+ V+ G H A T
Sbjct: 3284 RVIHVAVGALHCLAVT 3299
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
+ A+ G HS +TS G ++ +G+GDYG+LG+G P V +L + V+ V G
Sbjct: 724 DVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRVFAGS 781
Query: 471 NHTVCIADKGKAVYAFG 487
+V ++ +G+ +Y +G
Sbjct: 782 QFSVALSSEGQ-LYTWG 797
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQL 47
R + + ++ IVD++V H LA+S++G+VF WG N Q+
Sbjct: 818 RLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
I A + + + G + A++ G + WG + A+LG GN + P LV+ALS+
Sbjct: 662 IAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHM 721
Query: 69 IRQVS--AGRSHSAAWTAPPL 87
+ V+ +G +HS A T+ L
Sbjct: 722 VVDVALGSGDAHSLALTSEGL 742
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 9 IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
+ A + +VD+++G+ H LA+++ G VFAWG+ +LG GN +P LV +L
Sbjct: 714 VVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL-- 771
Query: 67 KNIRQVSAGRSHSAAWTA 84
+++V AG S A ++
Sbjct: 772 PRVQRVFAGSQFSVALSS 789
Score = 40.0 bits (92), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 1 MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
MS + + + + DI+ G+ H A++ +G V WG +LG G+ + P+L
Sbjct: 4174 MSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKL 4233
Query: 61 VLALSNKNIRQVSAG 75
V AL ++ G
Sbjct: 4234 VEALLGYRAIDIACG 4248
Score = 38.9 bits (89), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 9 IPAFKNIHIVDISVGT----EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
+P + H V IS+ H LA+ + ++WG D +LG G+ P + AL
Sbjct: 606 LPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAAL 665
Query: 65 SNKNIRQVSAGRSHSAAWTA 84
++ V G S+SAA T
Sbjct: 666 EQHCVQSVYCGCSYSAAITC 685
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 9 IPAFKNIHIVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
+ A +V ++ G+ LA++ G VF+WG+ +LG G P + LS
Sbjct: 3171 VTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSG 3230
Query: 67 KNIRQVSAGRSHSAAWT 83
+ Q+ G S A T
Sbjct: 3231 IGVVQIECGAQFSLALT 3247
Score = 32.7 bits (73), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 9 IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
+ A +DI+ G+ L +++ V++WG+ +LG G + P + +L+
Sbjct: 4234 VEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAG 4293
Query: 67 KNIRQVSAGRSHSAAWT 83
+ +V G S A T
Sbjct: 4294 LGVVKVECGSQFSVALT 4310
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 4 TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
T + I + IHI G++ + VS G+V+A G ++ +LGLG N P +
Sbjct: 3011 TFSQTISRLRPIHIAG---GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPV 3067
Query: 64 LSNKNIRQVS--AGRSHSAAWT 83
L +++V+ +G H+ A T
Sbjct: 3068 LRQYVVKKVAVHSGGKHALALT 3089
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 204/419 (48%), Gaps = 35/419 (8%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R + + ++ I+ G+ H + + G+V+ WG+N + QLG G + P+LV AL
Sbjct: 4243 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4302
Query: 67 KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
K + +V+ G +H+ AW+ P + G LP +P Y HLQ P+ +R R
Sbjct: 4303 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4351
Query: 127 LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
L LL+ S+L + + L G++D+ + + + +LR + + + V
Sbjct: 4352 LLLLHHISELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4407
Query: 186 KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
TM+ + GP V + R+ K ++ K +F Q+ ++ L LP R
Sbjct: 4408 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRV 4467
Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
WKVK +GE DD GG + ++I E+C EL +G PLL+ TPNG ++G NRD Y+LNP
Sbjct: 4468 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPATR 4527
Query: 297 ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
+ M F+FLG+L G+AIRT PL L L+ VWK + +T DL + D + L
Sbjct: 4528 APVHCSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4586
Query: 357 AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
IRD EA E + F S +G+ I + +T NR +Y AI
Sbjct: 4587 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4637
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
IACG +SA +T+ G LYT+G G+YGRLGHG++ + +P V L + V V+CG
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 616
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
T+ + + G+ V+++GDG+YGKLG G + TP+
Sbjct: 617 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 650
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
IACG HSA +TS+G LYT+G G+YGRLGHG P+ V L V V+CG
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
T+ + D+G V+++GDG++GKLG G + PQ
Sbjct: 3165 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3198
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)
Query: 351 YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
++++L A+ + ++G +++ F + + + G + GR+ ++ G +VP+ T +
Sbjct: 2986 FSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSG-TVPIPRQITALS 3044
Query: 406 RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
+ A+ G +H+ +T +G ++++G GD G+LGH + MN P + AL +
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
++CG +H+ + G+ +Y +G GEYG+LG G+ T LKP
Sbjct: 3105 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3143
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
+A G HSA VT+ G LYT+G G YGRLGH + + P+ V AL V ++CG
Sbjct: 4098 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDA 4157
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
T+C+ D V+++GDG+YGKLG G +
Sbjct: 4158 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4184
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
+ G VP+ + + CG + S +T +G +YT+G GDY RLGHG+ + + P
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243
Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
+V L V +++ G H VC + G+ VY +GD + G+LG G T P+
Sbjct: 4244 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4295
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
+ + IV ++VG H LAV+++GQV+AWG+N Q G G R+P LV L +
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311
Query: 69 IRQVSAGRSHSAAWT 83
I +V+ G SHS AWT
Sbjct: 3312 ITRVACGSSHSVAWT 3326
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
I CG + S +T +G ++T+G GDY RLGHG+ ++ + P+ V L + V+ G H
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3270
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+ + D G+ VYA+GD ++G+ G G T + P
Sbjct: 3271 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3301
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
GR+ + +++P+ A L+ + A G + VT NG ++++G+GDYG+LG G
Sbjct: 582 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
+ K P+ + L + V V CG ++ + G+ VY++G G+ +LG G
Sbjct: 642 GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 694
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
IACG + +T + ++++G+GDYG+LG G + KVP ++ +L + V V CG
Sbjct: 4150 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4209
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
+V + G AVY +G G+Y +LG G+
Sbjct: 4210 FSVALTKSG-AVYTWGKGDYHRLGHGS 4235
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 7 RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
R I A + + ++V G H A++ G+VF+WG D +LG +++N +P+L+ AL
Sbjct: 3038 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3097
Query: 65 SNKNIRQVSAGRSHSAAWTA 84
K IR ++ G SHSAA T+
Sbjct: 3098 KTKRIRDIACGSSHSAALTS 3117
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
+ A+ G KH ++S G +Y++G + G+LGHG P + +L + V V+ G
Sbjct: 4043 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4102
Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
H+ C+ G +Y +G G YG+LG ++ LKP
Sbjct: 4103 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4136
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
H + + G +Y++G GD GRLGHG T+ + P+ + A + HV ++CG ++
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
I +G+ +Y +G G YG+LG G++ + P
Sbjct: 567 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 595
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 414 IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
+ACG + + +T G ++++G+GD+G+LG G + +P+ + LN V + CG
Sbjct: 3157 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
++ + G V+ +G G+Y +LG G+ PQ
Sbjct: 3217 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3250
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
I +++ ++ + G++ +A++ GQV++WG + +LG G + + R P+L+ L K
Sbjct: 652 IEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 711
Query: 69 IRQVSAGRSHSAAWT 83
+ V+AG +H A T
Sbjct: 712 VIDVAAGSTHCLALT 726
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 15 IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
I V ++ G +H LA+S+ G+V++WG D +LG GN+ P+++ +L + V+A
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4100
Query: 75 GRSHSAAWTA 84
G +HSA TA
Sbjct: 4101 GGAHSACVTA 4110
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
AIA G H T +G +YT+G+ D G+LG GTT + P V AL V V+CG H
Sbjct: 4255 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4314
Query: 473 TV 474
T+
Sbjct: 4315 TL 4316
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 3 GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
G+ G +IP +NI + I G + LA++ +G V+ WG +LG G+ ++ R
Sbjct: 3190 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247
Query: 57 EPQLVLALSNKNIRQVSAGRSHSAAWT 83
+PQ+V L K I V+ G H A T
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVT 3274
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ CG + S +T +G +Y++G GD RLGHGT + + P+ + L V V+ G H
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 722
Query: 474 VCIADKGKAVYAFGDGE 490
+ + + + V+++G +
Sbjct: 723 LALTEDSE-VHSWGSND 738
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 11 AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
A +NI + H LA++ TG+V++WG +LG G+ + EP+++ A S
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 551
Query: 67 KNIRQVSAGRSHSAAWTA 84
K++ ++ G ++SAA TA
Sbjct: 552 KHVVHIACGSTYSAAITA 569
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 1 MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
M+ R I A K I DI+ G+ H A++++G+++ WG +LG G+ +P++
Sbjct: 3086 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145
Query: 61 VLALSNKNIRQVSAG 75
V L + QV+ G
Sbjct: 3146 VKVLLGHRVIQVACG 3160
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+A G H VT +G +Y +G+ D+G+ G+GTT + P V L + V+CG +H+
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322
Query: 474 V 474
V
Sbjct: 3323 V 3323
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 9 IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
+ K + ++D++ G+ LAV+ GQV++WG+ +LG G + P+L+ L +
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657
Query: 67 KNIRQVSAGRSHSAAWT 83
++ +V G S A T
Sbjct: 658 LDVIKVRCGSQFSIALT 674
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 41/76 (53%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
+ + ++D++ G+ H LA++ +V +WG+N Q ++ EP + L +K+
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKH 763
Query: 69 IRQVSAGRSHSAAWTA 84
I ++ G + S AW++
Sbjct: 764 IVGIACGPAQSFAWSS 779
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R I + + I +VD++ G H V+ G ++ WG +LG + + +P+LV AL
Sbjct: 4085 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4144
Query: 67 KNIRQVSAG 75
+ ++ G
Sbjct: 4145 HRVIDIACG 4153
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 16 HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
H+V I+ G+ + A++ G+++ WG + +LG G+ + P LV L + V+ G
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 17 IVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
++ ++ G+ LA+++ G VF+WG+ +LG G PQ + L+ + + Q+
Sbjct: 3154 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 3213
Query: 75 GRSHSAAWT 83
G S A T
Sbjct: 3214 GAQFSLALT 3222
Score = 36.2 bits (82), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 423 VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE--SVSCGLNHTVCIADKG 480
VT++G LY G G GRLG G T + P + ++ V ++ +V+ G H + ++ +G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 481 KAVYAFGDGEYGKLGLGN 498
+ VY++G+ E GKLG GN
Sbjct: 4061 E-VYSWGEAEDGKLGHGN 4077
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 9 IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
+ A + ++DI+ G+ L +++ V++WG+ +LG G + P + +L+
Sbjct: 4139 VEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4198
Query: 67 KNIRQVSAGRSHSAAWT 83
+ +V G S A T
Sbjct: 4199 LGVVKVECGSQFSVALT 4215
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 9 IPAFKN----IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLA 63
+P+F +++V ++ G++ + AV+ G+V++ G ++ +LGLG + P+ + A
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 3042
Query: 64 LSNKNIRQVS--AGRSHSAAWT 83
LS+ +++V+ +G H+ A T
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALT 3064
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
G + +A + + ++ +G D +LG KVP L+ ++V V+ G +
Sbjct: 2951 GLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 3008
Query: 477 ADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
+GK VY+ G+ G+LGLG ++G P P+
Sbjct: 3009 TVEGK-VYSCGEATNGRLGLGMSSGTVPIPR 3038
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 205/419 (48%), Gaps = 35/419 (8%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R + + ++ I+ G+ H + + G+V+ WG+N + QLG G + P+LV AL
Sbjct: 4241 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4300
Query: 67 KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRAR 126
K + +V+ G +H+ AW+ P + G LP +P Y HLQ P+ +R R
Sbjct: 4301 KKVNRVACGSAHTLAWSTSK--PASAGK---------LPAQVPMEYNHLQEIPIIALRNR 4349
Query: 127 LKLLNRFSDLIYQVVRLLPL-GNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVG 185
L LL+ S+L + + L G++D+ + + + +LR + + + V
Sbjct: 4350 LLLLHHLSELFCPCIPMFDLEGSLDETGLGPS----VGFDTLRGILISQGKEAAFRKVVQ 4405
Query: 186 KTMLVGKNFGPSVTVRRLTTKSKQT---------VKPIFAQISRQVVKMKGSDLRLPSRA 236
TM+ + GP V + R+ K ++ K +F Q+ ++ L LP R
Sbjct: 4406 ATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRV 4465
Query: 237 WKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS 296
WKVK +GE DD GG + ++I E+C EL +G PLL+ TPNG ++G NRD Y+L+P
Sbjct: 4466 WKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAAR 4525
Query: 297 ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLR 356
+ S M F+FLG+L G+AIRT PL L L+ VWK + +T DL + D + L
Sbjct: 4526 APVHSSM-FRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLM 4584
Query: 357 AIRDIHLSGVTEANFPEIIPLEC-FEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
IRD EA E + F S +G+ I + +T NR +Y AI
Sbjct: 4585 YIRD------NEATSEEFEAMSLPFTVPSASGQ--DIQLSSKHTHITLDNRAEYVRLAI 4635
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
IACG +SA +T+ G LYT+G G+YGRLGHG++ + +P V L + V V+CG
Sbjct: 556 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 615
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
T+ + + G+ V+++GDG+YGKLG G + TP+
Sbjct: 616 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPK 649
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
IACG HSA +TS+G LYT+G G+YGRLGHG P+ V L V V+CG
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
T+ + D+G V+++GDG++GKLG G + PQ
Sbjct: 3164 QTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQ 3197
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 90/160 (56%), Gaps = 9/160 (5%)
Query: 351 YAQSLRAIRDIHLSGVTEANFPEIIPLECFE-GASWTGRITPIVTGGQSVPL----TFAN 405
++++L A+ + ++G +++ F + + + G + GR+ ++ G +VP+ T +
Sbjct: 2985 FSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALS 3043
Query: 406 RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVES 465
+ A+ G +H+ +T +G ++++G GD G+LGH + MN P + AL +
Sbjct: 3044 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN--TGLKP 503
++CG +H+ + G+ +Y +G GEYG+LG G+ T LKP
Sbjct: 3104 IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKP 3142
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN-- 471
+A G HSA VT+ G LYT+G G YGRLGH + + P+ V AL V ++CG
Sbjct: 4096 VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 4155
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
T+C+ D V+++GDG+YGKLG G +
Sbjct: 4156 QTLCLTDD-DTVWSWGDGDYGKLGRGGS 4182
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
+ G VP+ + + CG + S +T +G +YT+G GDY RLGHG+ + + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
+V L V +++ G H VC + G+ VY +GD + G+LG G T P+
Sbjct: 4242 QVQGLQGKKVIAIATGSLHCVCCTEDGE-VYTWGDNDEGQLGDGTTNAIQRPR 4293
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
+ + IV ++VG H LAV+++GQV+AWG+N Q G G R+P LV L +
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310
Query: 69 IRQVSAGRSHSAAWTAPPLPP---HTP-----GHTPSSSLRLGLPQD 107
I +V+ G SHS AWT + H P P + LG+P D
Sbjct: 3311 ITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSD 3357
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
I CG + S +T +G ++T+G GDY RLGHG+ ++ + P+ V L + V+ G H
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3269
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+ + D G+ VYA+GD ++G+ G G T + P
Sbjct: 3270 LAVTDSGQ-VYAWGDNDHGQQGNGTTTVNRKP 3300
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 387 GRITPIVTGGQSVPLTFA--NRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
GR+ + +++P+ A L+ + A G + VT NG ++++G+GDYG+LG G
Sbjct: 581 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
+ K P+ + L + V V CG ++ + G+ VY++G G+ +LG G
Sbjct: 641 GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ-VYSWGKGDNQRLGHGT 693
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 414 IACGF--KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
IACG + +T + ++++G+GDYG+LG G + KVP ++ +L + V V CG
Sbjct: 4148 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 4207
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
+V + G AVY +G G+Y +LG G+
Sbjct: 4208 FSVALTKSG-AVYTWGKGDYHRLGHGS 4233
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 7 RHIPAFKNIHIVDISV--GTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL 64
R I A + + ++V G H A++ G+VF+WG D +LG +++N +P+L+ AL
Sbjct: 3037 RQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3096
Query: 65 SNKNIRQVSAGRSHSAAWTA 84
K IR ++ G SHSAA T+
Sbjct: 3097 KTKRIRDIACGSSHSAALTS 3116
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 411 EAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
+ A+ G KH ++S G +Y++G + G+LGHG P + +L + V V+ G
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG 4100
Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNT--GLKP 503
H+ C+ G +Y +G G YG+LG ++ LKP
Sbjct: 4101 AHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKP 4134
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN----KVHVESVSCGLNHTVC 475
H + + G +Y++G GD GRLGHG T+ + P+ + A + HV ++CG ++
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 476 IADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
I +G+ +Y +G G YG+LG G++ + P
Sbjct: 566 ITAEGE-LYTWGRGNYGRLGHGSSEDEAIP 594
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 414 IACGFK--HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
+ACG + + +T G ++++G+GD+G+LG G + +P+ + LN V + CG
Sbjct: 3156 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3215
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
++ + G V+ +G G+Y +LG G+ PQ
Sbjct: 3216 FSLALTKSG-VVWTWGKGDYFRLGHGSDVHVRKPQ 3249
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
I +++ +V + G++ +A++ GQV++WG + +LG G + + R P+L+ L K
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK 710
Query: 69 IRQVSAGRSHSAAWT 83
+ V+AG +H A T
Sbjct: 711 VIDVAAGSTHCLALT 725
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 15 IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
I V ++ G +H LA+S+ G+V++WG D +LG GN+ P+++ +L + V+A
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4098
Query: 75 GRSHSAAWTA 84
G +HSA TA
Sbjct: 4099 GGAHSACVTA 4108
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
AIA G H T +G +YT+G+ D G+LG GTT + P V AL V V+CG H
Sbjct: 4253 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4312
Query: 473 TV 474
T+
Sbjct: 4313 TL 4314
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ CG + S +T +G +Y++G GD RLGHGT + + P+ + L V V+ G H
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHC 721
Query: 474 VCIADKGKAVYAFGDGE 490
+ + + + V+++G +
Sbjct: 722 LALTEDSE-VHSWGSND 737
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 3 GTSGRHIPAFKNIH------IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
G+ G +IP +NI + I G + LA++ +G V+ WG +LG G+ ++ R
Sbjct: 3189 GSEGCNIP--QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3246
Query: 57 EPQLVLALSNKNIRQVSAGRSHSAAWT 83
+PQ+V L K I V+ G H A T
Sbjct: 3247 KPQVVEGLRGKKIVHVAVGALHCLAVT 3273
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 11 AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALS----N 66
A +NI + H LA++ TG+V++WG +LG G+ + EP+++ A S
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAG 550
Query: 67 KNIRQVSAGRSHSAAWTA 84
K++ ++ G ++SAA TA
Sbjct: 551 KHVVHIACGSTYSAAITA 568
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 1 MSGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQL 60
M+ R I A K I DI+ G+ H A++++G+++ WG +LG G+ +P++
Sbjct: 3085 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3144
Query: 61 VLALSNKNIRQVSAG 75
V L + QV+ G
Sbjct: 3145 VKVLLGHRVIQVACG 3159
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 9 IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
+ K + ++D++ G+ LAV+ GQV++WG+ +LG G + P+L+ L +
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656
Query: 67 KNIRQVSAGRSHSAAWT 83
++ +V G S A T
Sbjct: 657 LDVVKVRCGSQFSIALT 673
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+A G H VT +G +Y +G+ D+G+ G+GTT + P V L + V+CG +H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321
Query: 474 V 474
V
Sbjct: 3322 V 3322
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
+ + ++D++ G+ H LA++ +V +WG+N Q ++ EP + L K+
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762
Query: 69 IRQVSAGRSHSAAWTA 84
I ++ G + S AW++
Sbjct: 763 IVGIACGPAQSFAWSS 778
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R I + + I +VD++ G H V+ G ++ WG +LG + + +P+LV AL
Sbjct: 4083 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4142
Query: 67 KNIRQVSAG 75
+ ++ G
Sbjct: 4143 HRVVDIACG 4151
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 16 HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAG 75
H+V I+ G+ + A++ G+++ WG + +LG G+ + P LV L + V+ G
Sbjct: 552 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
A G + +A + + ++ +G D +LG KVP L+ ++V V+ G
Sbjct: 2948 AAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3005
Query: 475 CIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
+ +GK VYA G+ G+LGLG ++G P P+
Sbjct: 3006 AVTVEGK-VYACGEATNGRLGLGISSGTVPIPR 3037
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 17 IVDISVGTE--HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
++ ++ G+ LA+++ G VF+WG+ +LG G PQ + L+ + + Q+
Sbjct: 3153 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 3212
Query: 75 GRSHSAAWT 83
G S A T
Sbjct: 3213 GAQFSLALT 3221
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 423 VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVE--SVSCGLNHTVCIADKG 480
VT++G LY G G GRLG G T + P + ++ V ++ +V+ G H + ++ +G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 481 KAVYAFGDGEYGKLGLGN 498
+ VY++G+ E GKLG GN
Sbjct: 4059 E-VYSWGEAEDGKLGHGN 4075
Score = 35.8 bits (81), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 9 IPAFKN----IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLA 63
+P+F +++V ++ G++ + AV+ G+V+A G ++ +LGLG + P+ + A
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3041
Query: 64 LSNKNIRQVS--AGRSHSAAWT 83
LS+ +++V+ +G H+ A T
Sbjct: 3042 LSSYVVKKVAVHSGGRHATALT 3063
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 9 IPAFKNIHIVDISVGT--EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
+ A + +VDI+ G+ L +++ V++WG+ +LG G + P + +L+
Sbjct: 4137 VEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4196
Query: 67 KNIRQVSAGRSHSAAWT 83
+ +V G S A T
Sbjct: 4197 LGVVKVECGSQFSVALT 4213
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
I+CG+ HSA VT +G LYTFG + G+LG + MN + P+RV+ + + V V+CG
Sbjct: 195 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGG 253
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
HTV + + K VYAFG G++G+LGLG
Sbjct: 254 HTVVLTE--KVVYAFGLGQFGQLGLG 277
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
++CG +H+A+VT N LY FG+ ++G+LG G+ P + AL V+ +CG NH
Sbjct: 39 CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 98
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
T+ D G VYA G G+LGLG+T + T
Sbjct: 99 TLVSTDTG-GVYAAGGNNEGQLGLGDTDDRDT 129
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 9/88 (10%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGT----TMNWKVPERVVALNKVHVESVSCG 469
+ACG H+ V+T +Y FG G +G+LG GT T K+ ER+ H+ SCG
Sbjct: 248 VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHI---SCG 303
Query: 470 LNHTVCIADKGKAVYAFGDGEYGKLGLG 497
NHT + + G +Y FGDG +GKLGLG
Sbjct: 304 ENHTALMTELG-LLYTFGDGRHGKLGLG 330
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
++ G SA +T +G L+ +G+ G++G N +P V + +SCG H+
Sbjct: 145 LSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISW--ISCGYYHS 202
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
+ G+ +Y FG+ E GKLGL N
Sbjct: 203 AFVTMDGE-LYTFGEPENGKLGLPN 226
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
I+CG H+A++T G LYTFG+G +G+LG G N P + V+ ++CG
Sbjct: 300 ISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGC 359
Query: 472 HTVCIA 477
H + A
Sbjct: 360 HMLVFA 365
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 6 GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
+IP+ FKN + +S G EH V+ +++ +G+N+ QLGLG++ +P +
Sbjct: 23 AENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIK 82
Query: 63 ALSNKNIRQVSAGRSHSAAWT 83
AL + ++ + GR+H+ T
Sbjct: 83 ALKPEKVKLAACGRNHTLVST 103
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP--QLVLALSN 66
I A K + + G H L ++TG V+A G N++ QLGLG+ + R+ Q+V
Sbjct: 81 IKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGD-TDDRDTFHQIVFFTPA 139
Query: 67 KNIRQVSAGRSHSAAWT 83
I+Q+SAG + SAA T
Sbjct: 140 DTIKQLSAGANTSAALT 156
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
I +S G A++ G++F WG+NS+ Q+GL ++ N P V K I +S G
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGY 199
Query: 77 SHSAAWT 83
HSA T
Sbjct: 200 YHSAFVT 206
Score = 32.7 bits (73), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
++ ++ G H + ++ V+A+G QLGLG + EP+++ + ++ I +S G
Sbjct: 245 VIQVACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCG 303
Query: 76 RSHSAAWT 83
+H+A T
Sbjct: 304 ENHTALMT 311
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ACG HSA++T +G L+TFG G +G+LGH +T N P V L V ++CG HT
Sbjct: 248 VACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307
Query: 474 VC-IADKGKAVYAFGDGEYGKLGLGNT--GLKPTP 505
+ ++D GK V++FG G+ G+LG G T L P P
Sbjct: 308 LAYVSDLGK-VFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 6 GRHIPAFKNIHIVD---------ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
GR P+ IV+ IS G H +A+S +G +++WG N QLGLG+ +
Sbjct: 173 GRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKD 232
Query: 57 EPQLVLALSNKNIRQVSAGRSHSAAWTAPPL 87
+P L+ L N+ + V+ G SHSA T L
Sbjct: 233 DPSLIEGLDNQKVEFVACGGSHSALLTQDGL 263
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
A I+ G HS ++ +G +Y++G + G+LG G T + P + L+ VE V+CG +
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
H+ + G ++ FG G++G+LG +T
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNST 280
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
I+ I+ G H LA+S G++FAWG N QLG+G + + PQ+V L+ + Q+SAG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199
Query: 76 RSHSAA 81
+HS A
Sbjct: 200 EAHSMA 205
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
I CG HS ++ G L+ +G +G+LG G + P+ V L V + +S G H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
++ ++ G +Y++G E G+LGLG+T K P
Sbjct: 203 SMALSMSGN-IYSWGKNECGQLGLGHTESKDDP 234
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 34/76 (44%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
I N + ++ G H ++ G +F +G QLG + N P LV L
Sbjct: 237 IEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYR 296
Query: 69 IRQVSAGRSHSAAWTA 84
+ Q++ GR H+ A+ +
Sbjct: 297 VTQIACGRWHTLAYVS 312
Score = 32.3 bits (72), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 17 IVDISVGTEHVLA-VSNTGQVFAWGNNSDAQLGLG 50
+ I+ G H LA VS+ G+VF++G+ D QLG G
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
I+CG +H+AV+T +G ++TFG G G+LGH + + P RV+ L V ++CG HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
+ +YAFG G G+LG G+T
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTGHT 332
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ACG HS + +G +YT G G+LGH N PE++ AL H+ V+CG +H+
Sbjct: 39 VACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGESHS 96
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT 499
+ ++D+G+ ++++G G G+LGL T
Sbjct: 97 LALSDRGQ-LFSWGAGSDGQLGLMTT 121
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 2 SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQL 60
G I A + HI+ ++ G H LA+S+ GQ+F+WG SD QLGL + + P+L
Sbjct: 71 EGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130
Query: 61 VLALSNKNIRQVSAGRSHSAAWTA 84
+ L+ + I QVS G H A A
Sbjct: 131 IQKLNQQTILQVSCGNWHCLALAA 154
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
R I I+ +S G H LA++ GQ F WG NS QLGLG + + PQ V +L
Sbjct: 129 RLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188
Query: 66 NKNIRQVSAGRSHSAA 81
+ QV+AG +HS A
Sbjct: 189 GIPLAQVAAGGAHSFA 204
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMN-WKVPERVVALNKVHVESVSCGLNH 472
+ACG HS ++ G L+++G G G+LG TT + VP + LN+ + VSCG H
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
+ +A G+ + +G +G+LGLG
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLG 172
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 2 SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
S S + + + + I + ++ G H A+S +G VF WG N+ QLGL ++ + P V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236
Query: 62 LALSNKNIRQVSAGRSHSAAWT 83
L + + +S G H+A T
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLT 258
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 8 HIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
H+ + +V IS G EH ++ +G VF +G S QLG + + P+ VL L
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS 294
Query: 68 NIRQVSAGRSHSAAW 82
+ Q++ GR H+ A+
Sbjct: 295 EVTQIACGRQHTLAF 309
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
A +A G HS ++ +G ++ +G + G+LG + + P V L V +SCG
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 472 HTVCIADKGKAVYAFGDGEYGKLG 495
HT + G V+ FG G G+LG
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLG 275
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 414 IACGFKHS-AVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVS 467
IACG +H+ A V S+G +Y FG G G+LG G T N K P V H +S
Sbjct: 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLS 353
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
+ +++ G H + + G+V+ G N+ QLG + N +P+ + AL++++I V+ G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 77 SHSAA 81
SHS A
Sbjct: 94 SHSLA 98
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
++CG +H+AVVT N LY FG+ ++G+LG G+ P V AL V+ +CG NHT
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
+ + GK VYA G G+LGLG+T + T
Sbjct: 100 LVSTEGGK-VYAAGGNNEGQLGLGDTEERST 129
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
+ACG H+ V+T +YTFG G +G+LG GT + VP+ + + + ++CG NH
Sbjct: 248 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENH 306
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
T I D G +Y FGDG +GKLGLG
Sbjct: 307 TALITDMG-LMYTFGDGRHGKLGLG 330
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 5/86 (5%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPERVVALNKVHVESVSCGLN 471
I+CG+ HSA VT+ G LYTFG + G+LG + +N ++P+ V + V+ V+CG
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGG 253
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
HTV + + KAVY FG G++G+LGLG
Sbjct: 254 HTVVLTE--KAVYTFGLGQFGQLGLG 277
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
IACG H+A++T G +YTFG+G +G+LG G + N +P + V+ VSCG
Sbjct: 300 IACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGC 359
Query: 472 HTVCIA 477
HT+ A
Sbjct: 360 HTLVFA 365
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
++ G SA +T +G L+ +G+ G++G N VP++V + +SCG H+
Sbjct: 145 LSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISW--ISCGYYHS 202
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGN 498
+ +G+ +Y FG+ E GKLGL N
Sbjct: 203 AFVTTEGQ-LYTFGEPECGKLGLPN 226
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
I +S G+ A++ G++F WG+NS+ Q+GL N N PQ V K I +S G
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGY 199
Query: 77 SHSAAWT 83
HSA T
Sbjct: 200 YHSAFVT 206
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 6 GRHIPA---FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL 62
+IP+ F+N +S G EH V+ +++ +G+N+ QLGLG++ +P V
Sbjct: 23 AENIPSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVK 82
Query: 63 ALSNKNIRQVSAGRSHSAAWT 83
AL + ++ + GR+H+ T
Sbjct: 83 ALKPEKVKFAACGRNHTLVST 103
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV-LALSNK 67
+ A K + + G H L + G+V+A G N++ QLGLG+ L+ S +
Sbjct: 81 VKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR 140
Query: 68 NIRQVSAGRSHSAAWT 83
I+Q+SAG + SAA T
Sbjct: 141 KIKQLSAGSNTSAALT 156
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 423 VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKA 482
V+ +G ++TFG + +P + N V +SCG HT + K
Sbjct: 7 VMPGSGAVFTFGKTQFAE---------NIPSKFWFRNDVPT-FLSCGDEHTAVVTGNNK- 55
Query: 483 VYAFGDGEYGKLGLG--NTGLKPT 504
+Y FG +G+LGLG +T KPT
Sbjct: 56 LYMFGSNNWGQLGLGSKSTVSKPT 79
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
G + +G++ T Q +P LQ +IACG S V G +Y +G G+
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQ 236
Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
LG G++ N P RV AL + V+ V+CG HT+ + D+G+ +YA+G YG+LG GN
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-IYAWGANSYGQLGTGNKS 295
Query: 501 LK--PTP 505
+ PTP
Sbjct: 296 NQSYPTP 302
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
+ACG HS V+TS+G ++ +G + G++G G+T N +P RV NKV V S++CG
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMSIACGQM 215
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
++ + D G+ VY +G G+LGLG++G +PTP
Sbjct: 216 CSMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 248
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%)
Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
+G Q P A +ACG+ H+ V+T G +Y +G YG+LG G N P
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT 301
Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
VV +E +C HT +G VY +G
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 3 GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
G+SG + A + I + ++ G H L +++ GQ++AWG NS QLG GN+ N
Sbjct: 240 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY 299
Query: 58 PQLVLALSNKNIRQVSAGRSHSAA 81
P V+ ++ I + +H++A
Sbjct: 300 PTPVVVEKDRIIEIAACHSAHTSA 323
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
H + T++G ++T+G+ Y +LG+GTT + VP + L+ V V+CG H++ +
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
G+ V+A+G G++G G+T +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQPIPR 196
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R +N ++ I+ G +AV +TG+V+ WG N + QLGLG+ N P V AL
Sbjct: 197 RVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256
Query: 67 KNIRQVSAGRSHSAAWT 83
+++V+ G +H+ T
Sbjct: 257 IRVQRVACGYAHTLVLT 273
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 12 FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIR 70
N +++++ G+ H L +++ G+VFAWG N+ Q+G G+ N P+ V L NK +
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVM 208
Query: 71 QVSAGRSHSAA 81
++ G+ S A
Sbjct: 209 SIACGQMCSMA 219
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 7 RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
R + + I +S G+ H++ + G+VF WG+N+ +QLG G + P + L
Sbjct: 90 RRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149
Query: 65 SNKNIRQVSAGRSHSAAWTA 84
SNK + +V+ G HS T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
++CG +HSAVVT N LY FG+ ++G+LG G+ P V AL V+ +CG NHT
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPT 504
+ ++ +G VYA G G+LGLG+T + T
Sbjct: 100 L-VSTEGGNVYATGGNNEGQLGLGDTEERNT 129
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM-NWKVPERVVALNKVHVESVSCGLNH 472
+ACG +H+ V+T N +YTFG G +G+LG GT + P+ + + + +SCG NH
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENH 306
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG 497
T I D G +Y FGDG +GKLGLG
Sbjct: 307 TALITDIG-LMYTFGDGRHGKLGLG 330
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 19/93 (20%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG--------HGT-TMNWKVPERVVALNKVHVE 464
I+CG+ HSA VT++G LY FG + G+LG H T + ++PE+V+
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-------- 246
Query: 465 SVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
V+CG HTV + + AVY FG G++G+LGLG
Sbjct: 247 QVACGGEHTVVLTE--NAVYTFGLGQFGQLGLG 277
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
++ G SA +T +G L+ +G+ G++G N VP++V V +SCG H+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW--ISCGYYHS 202
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNT--GLKPTPQ 506
+ G+ +Y FG+ E GKLGL N G TPQ
Sbjct: 203 AFVTTDGE-LYVFGEPENGKLGLPNQLLGNHRTPQ 236
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT--MNWKVPERVVALNKVHVESVSCGLN 471
I+CG H+A++T G +YTFG+G +G+LG G N +P + V+ V+CG
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGC 359
Query: 472 HTVCIA 477
H V A
Sbjct: 360 HMVVFA 365
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 12 FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQ 71
FKN V +S G EH V+ +++ +G+N+ QLGLG++ +P V AL + ++
Sbjct: 32 FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKL 91
Query: 72 VSAGRSHSAAWT 83
+ GR+H+ T
Sbjct: 92 AACGRNHTLVST 103
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 9 IPAFKNIH-IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK 67
I F + H I +S G+ A++ G++F WG+NS+ Q+GL N N PQ V K
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GK 190
Query: 68 NIRQVSAGRSHSAAWT 83
+ +S G HSA T
Sbjct: 191 PVSWISCGYYHSAFVT 206
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 20 ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRS 77
IS G H V+ G+++ +G + +LGL NQ+ N+R PQLV + K I QV+ G
Sbjct: 195 ISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGE 253
Query: 78 HSAAWT 83
H+ T
Sbjct: 254 HTVVLT 259
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL--SN 66
+ A K + + G H L + G V+A G N++ QLGLG+ R V++ S
Sbjct: 81 VKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGD-TEERNTFHVISFFTSE 139
Query: 67 KNIRQVSAGRSHSAAWT 83
I+Q+SAG + SAA T
Sbjct: 140 HKIKQLSAGSNTSAALT 156
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAG 75
++ ++ G EH + ++ V+ +G QLGLG + EP+++ + ++ I +S G
Sbjct: 245 VIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCG 303
Query: 76 RSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHY 112
+H+A T L +T G L LGL ++ +H+
Sbjct: 304 ENHTALITDIGL-MYTFGDGRHGKLGLGL-ENFTNHF 338
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
I CG H+A +T G ++TFG G YG+LGH +T + P +V L V V+CG HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 306
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+Y+FG G G+LG G+T + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ CG +H+ V +G +YT G D G+LGH + K PE+VVAL+ ++ +V+CG HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHT 96
Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
+ + DKG+ VYA+G G+LGL
Sbjct: 97 LALNDKGQ-VYAWGLDSDGQLGL 118
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
A+ACG H+ + G +Y +G G+LG G+ +VP + +L+ + + V+CG
Sbjct: 87 VAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
H++ ++ K V+ +G +YG+LGLG K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIDCQKQTSPQ 182
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
+ A +IV ++ G H LA+++ GQV+AWG +SD QLGL G++ R P+ + +LS
Sbjct: 76 EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135
Query: 66 NKNIRQVSAGRSHSAA 81
+ I QV+ G HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
R+I + +I IV ++ G H LA+S +VF WG N QLGLG + PQL+ +L
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188
Query: 66 NKNIRQVSAGRSHSAAWT 83
QV+AG +HS T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+A G HS V+T +G ++ +G +G+LG + VP + +L + + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
+ +G V+ FG G YG+LG +T + P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 4 TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
TS + I + I + ++ G H ++ +G +F WG N QLGL ++ + P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 64 LSNKNIRQVSAGRSHSAAWT 83
L ++ I + G H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
+ACG+ HS ++ ++ +G YG+LG G + P+ + +L + V+ G H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+ + G A++ +G ++G+LGL + + P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R F N + D+ G H + V + G V+ G N QLG ++ + ++P+ V+AL
Sbjct: 26 RRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83
Query: 67 KNIRQVSAGRSHSAA 81
+NI V+ G +H+ A
Sbjct: 84 QNIVAVACGEAHTLA 98
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 1 MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
++ + R++P + ++ IV I G +H A++ G VF +G QLG + +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 57 EPQLVLALSNKNIRQVSAGRSHSAAWT 83
P+ V L + QV+ GR H++A+
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
+ +GN YG+LG G V P R V V CGL HTV + D G VY G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59
Query: 488 DGEYGKLGLGNTGLKP 503
+ G+LG + KP
Sbjct: 60 CNDLGQLGHEKSRKKP 75
Score = 35.8 bits (81), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 23/209 (11%)
Query: 224 KMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTG 283
K K D + P KV +GE A DAGGV + + ELL P
Sbjct: 728 KTKNIDYKKP---LKVIFVGEDAVDAGGVRKEFFLLIMRELLD---------PKYGMFRY 775
Query: 284 YNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTD 343
Y R I D + L H +G++ G+AI + L ++K +++ + D
Sbjct: 776 YEDSRLIWFSDKTFEDSDLFH--LIGVICGLAIYNFTIVDLHFPLALYKKLLKRKPSLDD 833
Query: 344 LEDNDTLYAQSLRAIRDIHLSGVTEA---NFPEIIPLECFEGASWTGRITPIVTGGQSVP 400
L++ +S++ + D + E NF I +E F GA+ + +V G
Sbjct: 834 LKELMPAVGRSMQQLLDYPEDDIEETFCLNFT--ITVENF-GAT---EVKELVLNGADTA 887
Query: 401 LTFANRLQYYEAAIACGFKHSAVVTSNGY 429
+ NR ++ +A + F S + +
Sbjct: 888 VNRQNRQEFVDAYVDYIFNKSVASLFDAF 916
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
I CG H+A +T G ++TFG G YG+LGH +T + P +V L V ++CG HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+Y+FG G G+LG G+T + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ CG +H+ V +G +YT G D G+LGH + K PE+VVAL+ ++ +VSCG HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96
Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
+ + DKG+ VYA+G G+LGL
Sbjct: 97 LALNDKGQ-VYAWGLDSDGQLGL 118
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
+ A +IV +S G H LA+++ GQV+AWG +SD QLGL G++ R P+ + +LS
Sbjct: 76 EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135
Query: 66 NKNIRQVSAGRSHSAA 81
+ I QV+ G HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
R+I + +I IV ++ G H LA+S +VF WG N QLGLG + + PQL+ +L
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL 188
Query: 66 NKNIRQVSAGRSHSAAWT 83
QV+AG +HS T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLG-HGTTMNWKVPERVVALNKVHVESVSCGL 470
A++CG H+ + G +Y +G G+LG G+ +VP + +L+ + + V+CG
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
H++ ++ K V+ +G +YG+LGLG K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGIECQKQTSPQ 182
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+A G HS V+T +G ++ +G +G+LG + VP + +L + + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
+ +G V+ FG G YG+LG +T + P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 4 TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
TS + I + I + ++ G H ++ +G +F WG N QLGL ++ + P L+ +
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 64 LSNKNIRQVSAGRSHSAAWT 83
L ++ I + G H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
+ACG+ HS ++ ++ +G YG+LG G + P+ + +L + V+ G H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+ + G A++ +G ++G+LGL + + P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R F N + D+ G H + V + G V+ G N QLG ++ + ++P+ V+AL
Sbjct: 26 RKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83
Query: 67 KNIRQVSAGRSHSAA 81
+NI VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 1 MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
++ + R++P + ++ IV I G +H A++ G VF +G QLG + +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 57 EPQLVLALSNKNIRQVSAGRSHSAAWT 83
P+ V L + Q++ GR H++A+
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 40.0 bits (92), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
+ +GN YG+LG G V P + V V CGL HTV + D G VY G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDG-TVYTCG 59
Query: 488 DGEYGKLGLGNTGLKP 503
+ G+LG + KP
Sbjct: 60 CNDLGQLGHEKSRKKP 75
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
I CG H+A +T G ++TFG G YG+LGH +T + P +V L V ++CG HT
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHT 306
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+Y+FG G G+LG G+T + +P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ CG +H+ V +G +YT G D G+LGH + K PE+VVAL+ ++ +VSCG HT
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHT 96
Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
+ + DKG+ VYA+G G+LGL
Sbjct: 97 LALNDKGQ-VYAWGLDSDGQLGL 118
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYREPQLVLALS 65
+ A +IV +S G H LA+++ GQV+AWG +SD QLGL G++ R P+ + +LS
Sbjct: 76 EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135
Query: 66 NKNIRQVSAGRSHSAA 81
+ I QV+ G HS A
Sbjct: 136 DIQIVQVACGYYHSLA 151
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR-EPQLVLALS 65
R+I + +I IV ++ G H LA+S +VF WG N QLGLG + PQL+ +L
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188
Query: 66 NKNIRQVSAGRSHSAAWT 83
QV+AG +HS T
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGH-GTTMNWKVPERVVALNKVHVESVSCGL 470
A++CG H+ + G +Y +G G+LG G+ +VP + +L+ + + V+CG
Sbjct: 87 VAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPT-PQ 506
H++ ++ K V+ +G +YG+LGLG K T PQ
Sbjct: 147 YHSLALS-KASEVFCWGQNKYGQLGLGTDCKKQTSPQ 182
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+A G HS V+T +G ++ +G +G+LG + VP + +L + + CG +HT
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 254
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
+ +G V+ FG G YG+LG +T + P+
Sbjct: 255 AALTKEG-GVFTFGAGGYGQLGHNSTSHEINPR 286
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 4 TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
TS + + + I + ++ G H ++ +G +F WG N QLGL ++ + P L+ +
Sbjct: 179 TSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 64 LSNKNIRQVSAGRSHSAAWT 83
L ++ I + G H+AA T
Sbjct: 239 LRSQKIVYICCGEDHTAALT 258
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV-PERVVALNKVHVESVSCGLNH 472
+ACG+ HS ++ ++ +G YG+LG GT + P+ + +L + V+ G H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+ + G A++ +G ++G+LGL + + P
Sbjct: 202 SFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R F N + D+ G H + V + G V+ G N QLG ++ + ++P+ V+AL
Sbjct: 26 RKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDA 83
Query: 67 KNIRQVSAGRSHSAA 81
+NI VS G +H+ A
Sbjct: 84 QNIVAVSCGEAHTLA 98
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 1 MSGTSGRHIP----AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR 56
++ + R++P + ++ IV I G +H A++ G VF +G QLG + +
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 57 EPQLVLALSNKNIRQVSAGRSHSAAWT 83
P+ V L + +++ GR H++A+
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 430 LYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
+ +GN +G+LG G V P + V V CGL HTV + D G VY G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDG-TVYTCG 59
Query: 488 DGEYGKLGLGNTGLKP 503
+ G+LG + KP
Sbjct: 60 CNDLGQLGHEKSRKKP 75
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
G + +G++ T Q +P LQ IACG S V G +Y +G G+
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQ 236
Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
LG G++ N P RV AL + V+ V+CG HT+ + D+G+ +YA+G YG+LG GN
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-IYAWGANSYGQLGTGNKS 295
Query: 501 LK--PTP 505
+ PTP
Sbjct: 296 NQSYPTP 302
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
+ACG HS V+TS+G ++ +G + G++G G+T N +P RV NKV V +++CG
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQM 215
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
++ + D G+ VY +G G+LGLG++G +PTP
Sbjct: 216 CSMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTP 248
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%)
Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441
G + G++ +G Q P A +ACG+ H+ V+T G +Y +G YG+L
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL 289
Query: 442 GHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
G G N P VV +E +C HT +G VY +G
Sbjct: 290 GTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 3 GTSGRH-----IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYRE 57
G+SG + A + I + ++ G H L +++ GQ++AWG NS QLG GN+ N
Sbjct: 240 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY 299
Query: 58 PQLVLALSNKNIRQVSAGRSHSAA 81
P V+ ++ I + +H++A
Sbjct: 300 PTPVVVEKDRIIEIAACHSAHTSA 323
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
H + T++G ++T+G+ Y +LG+GTT + VP + L+ V V+CG H++ +
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
G+ V+A+G G++G G+T +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTANQPIPR 196
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R +N +++I+ G +AV +TG+V+ WG N + QLGLG+ N P V AL
Sbjct: 197 RVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256
Query: 67 KNIRQVSAGRSHSAAWT 83
+++V+ G +H+ T
Sbjct: 257 IRVQRVACGYAHTLVLT 273
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 8 HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
HI N +++++ G+ H L +++ G+VFAWG N+ Q+G G+ N P+ V L
Sbjct: 144 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQ 203
Query: 66 NKNIRQVSAGRSHSAA 81
NK + ++ G+ S A
Sbjct: 204 NKVVMNIACGQMCSMA 219
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 7 RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
R + + I +S G+ H++ + G+VF WG+N+ +QLG G + P + L
Sbjct: 90 RRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149
Query: 65 SNKNIRQVSAGRSHSAAWTA 84
SNK + +V+ G HS T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
+ACG HS V+TS+G ++ +G + G++G G+T+N +P RV NKV V +++CG
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 215
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+ + D G+ VY +G G+LGLGN+G +PTP
Sbjct: 216 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 248
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
G + +G++ T Q +P LQ IACG V G +Y +G G+
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
LG G + N P RV AL + V+ V+CG HT+ + D+G+ VYA+G YG+LG GN
Sbjct: 237 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295
Query: 501 LK--PTP 505
+ PTP
Sbjct: 296 NQSYPTP 302
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R +N +V I+ G +AV +TG+V+ WG N + QLGLGN N P V AL
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256
Query: 67 KNIRQVSAGRSHSAAWT 83
+++V+ G +H+ T
Sbjct: 257 IRVQRVACGYAHTLVLT 273
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
+ A + I + ++ G H L +++ GQV+AWG NS QLG GN+ N P V ++
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 310
Query: 69 IRQVSAGRSHSAA 81
I + +H++A
Sbjct: 311 IEIAACHSTHTSA 323
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%)
Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
+G Q P A +ACG+ H+ V+T G +Y +G YG+LG G N P
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301
Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
V +E +C HT +G VY +G
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
H + T+ G ++T+G+ Y +LG+GTT + VP + L+ V V+CG H++ +
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
G+ V+A+G G++G G+T +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 196
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 8 HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
HI N +++++ G+ H L +++ G+VFAWG N+ Q+G G+ +N P+ V L
Sbjct: 144 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQ 203
Query: 66 NKNIRQVSAGR 76
NK + ++ G+
Sbjct: 204 NKVVVTIACGQ 214
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 7 RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
R + + I +S G+ H++ + G+VF WG+N+ +QLG G + P + L
Sbjct: 90 RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149
Query: 65 SNKNIRQVSAGRSHSAAWTA 84
SNK + +V+ G HS T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169
Score = 32.3 bits (72), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 425 TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVY 484
T N ++ G G LG G + P R+ +LN + +S G + +A V+
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF 121
Query: 485 AFGDGEYGKLGLGNT--GLKPT 504
+G Y +LG G T GL P
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPC 143
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCGLN 471
+ACG HS V+TS+G ++ +G + G++G G+T+N +P RV NKV V +++CG
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQM 215
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+ + D G+ VY +G G+LGLGN+G +PTP
Sbjct: 216 CCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTP 248
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQ-YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGR 440
G + +G++ T Q +P LQ IACG V G +Y +G G+
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
LG G + N P RV AL + V+ V+CG HT+ + D+G+ VYA+G YG+LG GN
Sbjct: 237 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ-VYAWGANSYGQLGTGNKS 295
Query: 501 LK--PTP 505
+ PTP
Sbjct: 296 NQSYPTP 302
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R +N +V I+ G +AV +TG+V+ WG N + QLGLGN N P V AL
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256
Query: 67 KNIRQVSAGRSHSAAWT 83
+++V+ G +H+ T
Sbjct: 257 IRVQRVACGYAHTLVLT 273
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
+ A + I + ++ G H L +++ GQV+AWG NS QLG GN+ N P V ++
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRI 310
Query: 69 IRQVSAGRSHSAA 81
I + +H++A
Sbjct: 311 IEIAACHSTHTSA 323
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%)
Query: 394 TGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPE 453
+G Q P A +ACG+ H+ V+T G +Y +G YG+LG G N P
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT 301
Query: 454 RVVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
V +E +C HT +G VY +G
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERV-VALNKVHVESVSCGLNHTVCIAD 478
H + T+ G ++T+G+ Y +LG+GTT + VP + L+ V V+CG H++ +
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
G+ V+A+G G++G G+T +P P+
Sbjct: 170 DGE-VFAWGYNNSGQVGSGSTVNQPIPR 196
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 8 HIPA-FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALS 65
HI N +++++ G+ H L +++ G+VFAWG N+ Q+G G+ +N P+ V L
Sbjct: 144 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQ 203
Query: 66 NKNIRQVSAGR 76
NK + ++ G+
Sbjct: 204 NKVVVTIACGQ 214
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 7 RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
R + + I +S G+ H++ + G+VF WG+N+ +QLG G + P + L
Sbjct: 90 RRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNL 149
Query: 65 SNKNIRQVSAGRSHSAAWTA 84
SNK + +V+ G HS T+
Sbjct: 150 SNKQVIEVACGSYHSLVLTS 169
Score = 32.3 bits (72), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 425 TSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVY 484
T N ++ G G LG G + P R+ +LN + +S G + +A V+
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF 121
Query: 485 AFGDGEYGKLGLGNT--GLKPT 504
+G Y +LG G T GL P
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPC 143
>sp|Q3U487|HECD3_MOUSE E3 ubiquitin-protein ligase HECTD3 OS=Mus musculus GN=Hectd3 PE=1
SV=2
Length = 861
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
D R P R W+ K + EG D GG F D++ +M EL + +P VRT N
Sbjct: 517 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 576
Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
TG RD Y+ NP S + ++++G L G A+R K+ L L L VWK + E V
Sbjct: 577 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 632
Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
+++ D D++ + L + GV + F E F ++ ++ GG
Sbjct: 633 SWSKDFPAVDSVLVKLLEV-----MEGVDKETFEFKFGKELTFTTVLSDQQVVELIPGGT 687
Query: 398 SVPLTFANRLQYYE 411
+ + + +R ++ +
Sbjct: 688 GIVVEYEDRSRFIQ 701
>sp|Q5T447|HECD3_HUMAN E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens GN=HECTD3 PE=1
SV=1
Length = 861
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 229 DLRLPSRA---WKVKLLGEGADDAGGVFDDTITEMCGELLSGA------VPLLVRTPNGV 279
D R P R W+ K + EG D GG F D++ +M EL + +P VRT N
Sbjct: 517 DYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQG 576
Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
TG RD Y+ NP S + ++++G L G A+R K+ L L L VWK + E V
Sbjct: 577 NGTGEARDMYVPNP----SCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEV 632
Query: 340 TFT-DLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLE-CFEGASWTGRITPIVTGGQ 397
+++ D D++ + L + G+ + F E F ++ ++ GG
Sbjct: 633 SWSKDFPAVDSVLVKLLEV-----MEGMDKETFEFKFGKELTFTTVLSDQQVVELIPGGA 687
Query: 398 SVPLTFANRLQYYE 411
+ + + +R ++ +
Sbjct: 688 GIVVGYGDRSRFIQ 701
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
HS ++T+ G L+++G + G+LGHG T + P + AL+ + +CG NHT+ + D
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 218
Query: 480 GKAVYAFGDGEYGKLGLGN-TGLKPTP 505
G +V+AFG+ + G+LGLGN T P+P
Sbjct: 219 G-SVFAFGENKMGQLGLGNQTDAVPSP 244
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 25/106 (23%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW------------KVPERVVALNK- 460
+ACG + S ++ G LY+FG +YG+LGH + + VP RV +
Sbjct: 257 MACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEK 316
Query: 461 -----------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
V V V+CG NHT+ + D K V+++G G YG+LG
Sbjct: 317 TKDGQILPVPNVVVRDVACGANHTL-VLDSQKRVFSWGFGGYGRLG 361
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN 54
R I A + IV + G H LA+++TG VFA+G N QLGLGNQ +
Sbjct: 192 RLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTD 239
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
ACG H+ +T G ++ FG G+LG G + + N + ++CG ++
Sbjct: 206 ACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSM 265
Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTG 500
+ KG +Y+FG EYG+LG + G
Sbjct: 266 LMDCKGN-LYSFGCPEYGQLGHNSDG 290
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 26 HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
H L ++ G++++WG N QLG G+ P+L+ ALS++ I + GR+H+ A T
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 216
Score = 39.3 bits (90), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
+ACG H+ V+ S ++++G G YGRLGH + VP R+V L
Sbjct: 333 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP-RLVKL 376
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 14 NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV--LALSNKNIRQ 71
N+ + D++ G H L + + +VF+WG +LG Q + P+LV + Q
Sbjct: 327 NVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQ 386
Query: 72 VSAGRSHSAA 81
+ AG + S A
Sbjct: 387 IYAGYTCSFA 396
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
A G HS ++ SN +Y+ G+ +G+LG + + PE + ALN +HV+ VSCG H+V
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87
Query: 475 CIADKGKAVYAFGDGEYGKLGLGN 498
+ KGK V+A+G G G+LG+G
Sbjct: 88 AVCHKGK-VFAWGAGSEGQLGIGE 110
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN--QINYREPQLVLALSN 66
I A ++H+ +S G EH +AV + G+VFAWG S+ QLG+G +I++ P + AL+
Sbjct: 68 IQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM-PTKIKALAG 126
Query: 67 KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGL-----PQDIPDHYGHLQNKPLP 121
I QVS G HS A + H +S +LGL Q IP L+ PL
Sbjct: 127 IKIIQVSCGHYHSLALSE---DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLA 183
Query: 122 LIRA 125
+ A
Sbjct: 184 QVAA 187
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG-NQINYREPQLVLALSNK 67
I A I I+ +S G H LA+S G VF+WG NS+ QLGLG N + PQ V +L
Sbjct: 121 IKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI 180
Query: 68 NIRQVSAGRSHSAA 81
+ QV+AG +HS A
Sbjct: 181 PLAQVAAGGTHSFA 194
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
++CG +HS V G ++ +G G G+LG G +P ++ AL + + VSCG H
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 138
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLG-NTGLKPTPQ 506
++ +++ G V+++G G+LGLG N+ + PQ
Sbjct: 139 SLALSEDGH-VFSWGRNSEGQLGLGKNSRSQAIPQ 172
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
I A KN+ ++ IS G EH ++ GQVF +G NS QL + R PQL+ + +
Sbjct: 229 IGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR- 287
Query: 69 IRQVSAGRSHSAAW 82
+ Q+ H+ A+
Sbjct: 288 VSQIECASYHTIAY 301
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL-GNQINYR--EPQLVLA 63
+ + + + I + ++ G H A+S TG F WG+N QL L GN++ + +P + A
Sbjct: 172 QKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGA 231
Query: 64 LSNKNIRQVSAGRSHSAAWT 83
L N ++ +S G H+A T
Sbjct: 232 LKNLSVIYISCGYEHTAVLT 251
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
I+CG++H+AV+T G ++TFG G+L + P+ + + V + C HT
Sbjct: 240 ISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHT 298
Query: 474 VCIADKGKAVYAFGDGEYGKLGLG 497
+ Y + G+ LG G
Sbjct: 299 I--------AYVYTTGQVVSLGRG 314
Score = 39.7 bits (91), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRL---GHGTTMNWKVPERVVALNKVHVESVSC 468
A +A G HS ++ G + +G+ G+L G+ P + AL + V +SC
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242
Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKL 494
G HT + ++G+ V+ FG G+L
Sbjct: 243 GYEHTAVLTEEGQ-VFTFGGNSSGQL 267
Score = 39.3 bits (90), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 2 SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
+GTSG I ++ + G H L + + +V++ G+NS QLG + P+ +
Sbjct: 17 AGTSG--------IELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPI 68
Query: 62 LALSNKNIRQVSAGRSHSAA 81
AL++ ++ VS G+ HS A
Sbjct: 69 QALNDLHVDLVSCGKEHSVA 88
Score = 35.4 bits (80), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 77/190 (40%), Gaps = 22/190 (11%)
Query: 220 RQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGV 279
RQ+ +++ DLR + V + E +AGGV + + E+ + + G
Sbjct: 673 RQLRQVEDFDLR---KQLSVGFINEIRPEAGGVSSEFFHCIFEEMTDPKYEMFIYPEKGS 729
Query: 280 ADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPV 339
+ + +NP +S + GIL G+++ K + LP ++K ++ +
Sbjct: 730 SMW------FPVNPKFEKS-----SYFLFGILCGLSLHNLKVINLPFPLALYKKLLNQKP 778
Query: 340 TFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSV 399
+ DL++ ++L+ + + + E L + W + ++ G SV
Sbjct: 779 SLEDLKELSLPLGRNLQEVLNCEAGDIEE--------LHMYFSIYWDQKDVDLIPDGISV 830
Query: 400 PLTFANRLQY 409
P+ N+ Y
Sbjct: 831 PVNETNKRDY 840
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
IACG HSA + S+G L+TFG G +G+LGHG N VP RV L V ++CG
Sbjct: 832 IACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGL-ICKVTQIACGRA 890
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGN 498
HTV + D G+ V G G YG++G+ +
Sbjct: 891 HTVVLTDTGR-VLVCGSGSYGQMGVDD 916
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
++ACG HSA++TS G LYT+G G +LGHG P +V N +VS G NH
Sbjct: 1026 SVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNH 1085
Query: 473 TVCIADKGKAVYAFGDGEYGKLGL 496
T+ D G +V+A+G ++G+ G+
Sbjct: 1086 TIASTDDG-SVFAWGKNDFGQCGV 1108
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH-----VESVS 467
AIACG +H V++S+G L +G +G+ G G + R+ L++V +E ++
Sbjct: 780 AIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSF------RIANLHQVDGDWPAIEKIA 833
Query: 468 CGLNHTVCIADKGKAVYAFGDGEYGKLGLG 497
CG H+ I G +++ FG G +G+LG G
Sbjct: 834 CGQFHSAFICSDG-SLWTFGWGVWGQLGHG 862
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R + F + +IV ++ G H +++ G ++ WG D QLG GN+ EP V +
Sbjct: 1014 REVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNG 1073
Query: 67 KNIRQVSAGRSHSAAWT 83
VS G +H+ A T
Sbjct: 1074 AKWVNVSLGNNHTIAST 1090
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 20 ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN-KNIRQVSAGRSH 78
I+ G EH+L +S++GQ+ AWG N Q G+G+ ++R L + I +++ G+ H
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGH--SFRIANLHQVDGDWPAIEKIACGQFH 838
Query: 79 SA 80
SA
Sbjct: 839 SA 840
Score = 36.6 bits (83), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 18 VDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN 54
V++S+G H +A ++ G VFAWG N Q G+ + N
Sbjct: 1077 VNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKN 1113
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ACG++H+ V+ +G LYT+G YG+LGHG + +P ++ AL+ + +S G HT
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHT 288
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+ + GK +Y +G ++G++G+GN + +P
Sbjct: 289 MALTSDGK-LYGWGWNKFGQVGVGNNLDQCSP 319
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 405 NRLQYYEA----AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK 460
++Q +E +A G +H+A VT +G LY +G G YG LG G + VPERV +
Sbjct: 164 QKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGG 223
Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
+ V+CG HT+ ++ G A+Y +G +YG+LG G+
Sbjct: 224 EKMSMVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGD 260
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
I+ G HS + S + ++G G+ G+LGHG + P ++ AL+ + SV+CG +HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
V + G VY++G G++G+LG GN+ TP
Sbjct: 80 VAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTP 111
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 413 AIACGFKHSAVVTSNGY-LYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
++ CG H+ + +G +Y++G GD+GRLGHG + + P + AL+ + ++ ++CG +
Sbjct: 71 SVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDS 130
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
H + + +G+ V ++G + G+LGLG+T PQ
Sbjct: 131 HCLAVTMEGE-VQSWGRNQNGQLGLGDTEDSLVPQ 164
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
IACG H VT G + ++G G+LG G T + VP+++ A + ++ V+ G HT
Sbjct: 125 IACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHT 184
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
+ + G +Y +G G YG LGLG+ + P+
Sbjct: 185 AAVTEDGD-LYGWGWGRYGNLGLGDRTDRLVPE 216
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
I A I I I+ G H LAV+ G+V +WG N + QLGLG+ + PQ + A
Sbjct: 114 IKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR 173
Query: 69 IRQVSAGRSHSAA 81
I+ V+AG H+AA
Sbjct: 174 IKMVAAGAEHTAA 186
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLN 471
+ I+ G++H+ +TS+G LY +G +G++G G ++ P +V + V VSCG
Sbjct: 279 SQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWR 338
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNT 499
HT+ + ++ V+A+G G G+LG+G +
Sbjct: 339 HTLAVTERNN-VFAWGRGTNGQLGIGES 365
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL-----SNKNIRQ 71
+V +S G H LAV+ VFAWG ++ QLG+G ++ P+++ AL S ++I
Sbjct: 330 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQHIES 389
Query: 72 VSAGRSHSAAWTAP----PLPPHTPGHTPSSSLRLGLPQDIP 109
+ S +W +P + P G T SS G +P
Sbjct: 390 SNIDPSSGKSWVSPAERYAVVPDETGLTDGSSKGNGGDISVP 431
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
+ A N I IS G H +A+++ G+++ WG N Q+G+GN ++ P V ++
Sbjct: 270 LEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK 329
Query: 69 IRQVSAGRSHSAA 81
+ QVS G H+ A
Sbjct: 330 VVQVSCGWRHTLA 342
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
+ I AF+ I I ++ G EH AV+ G ++ WG LGLG++ + P+ V +
Sbjct: 164 QKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGG 223
Query: 67 KNIRQVSAGRSHS 79
+ + V+ G H+
Sbjct: 224 EKMSMVACGWRHT 236
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 8 HIPAFKNIHIVDISVGTEHVLAVSNTG-QVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
+ A IV ++ G +H +A S +G +V++WG +LG GN + P + AL
Sbjct: 60 QLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHG 119
Query: 67 KNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQD 107
I+Q++ G SH A T + G + L LG +D
Sbjct: 120 IRIKQIACGDSHCLAVTMEG-EVQSWGRNQNGQLGLGDTED 159
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 20 ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
++ G H ++VS +G ++ +G + QLG G+ ++ P + ALSN I Q+S G H+
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHT 288
Query: 80 AAWTA 84
A T+
Sbjct: 289 MALTS 293
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 20 ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
IS G H +A+ + V +WG D QLG G+ + P + AL I V+ G H+
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 80 AAWTAPPLPPHTPGHTPSSSLRLGLPQDI 108
A++ + ++ G L G D+
Sbjct: 80 VAYSQSGMEVYSWGWGDFGRLGHGNSSDL 108
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL-----NKVHVES 465
++CG++H+ VT ++ +G G G+LG G +++ P+ + AL + H+ES
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQHIES 389
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
HS ++T+ G L+++G + G+LGHG T + P + L+ + S +CG NHT+ + +
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 220
Query: 480 GKAVYAFGDGEYGKLGLGN-TGLKPTP 505
G +V+AFG+ + G+LGLGN T P+P
Sbjct: 221 G-SVFAFGENKMGQLGLGNQTDAVPSP 246
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 25/106 (23%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW------------KVPERVVALNK- 460
+ACG + S ++ G LY+FG +YG+LGH + + VP RV +
Sbjct: 259 MACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEK 318
Query: 461 -----------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
V V V+CG NHT+ + D K V+++G G YG+LG
Sbjct: 319 TKDGQILPVPNVVVRDVACGANHTL-VLDSQKRVFSWGFGGYGRLG 363
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
+ ACG H+ +T G ++ FG G+LG G + + N + ++CG
Sbjct: 206 SAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEF 265
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTG 500
++ + KG +Y+FG EYG+LG + G
Sbjct: 266 SMIMDCKGN-LYSFGCPEYGQLGHNSDG 292
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 26 HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
H L ++ G++++WG N QLG G+ P+L+ LS++ I + GR+H+ A T
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 218
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN 54
R I + IV + G H LA++ TG VFA+G N QLGLGNQ +
Sbjct: 194 RLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 241
Score = 39.3 bits (90), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
+ACG H+ V+ S ++++G G YGRLGH + VP R+V L
Sbjct: 335 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP-RLVKL 378
Score = 36.6 bits (83), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 14 NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV--LALSNKNIRQ 71
N+ + D++ G H L + + +VF+WG +LG Q + P+LV + Q
Sbjct: 329 NVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQ 388
Query: 72 VSAGRSHSAA 81
+ AG + S A
Sbjct: 389 IYAGYTCSFA 398
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 386 TGRITPIVTGGQSVPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444
G++ T Q P N L IACG S V NG +Y +G G+LG G
Sbjct: 157 CGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
Query: 445 TTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
N P RV AL+ V V + CG HT+ + D+G +YA+G YG+LG GN
Sbjct: 217 NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGN 269
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV---SCGL 470
+ACG HS + ++G ++ +G + G++G G+T N P +V N +H++ V +CG
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVT--NCLHIKRVVGIACGQ 190
Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
++ + D G+ VY +G G+LGLGN G + TP
Sbjct: 191 TSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTP 224
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
+V I+ G +AV + G+V+ WG N + QLGLGN N P V AL + + Q+ G
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGY 242
Query: 77 SHSAAWTAPPL 87
+H+ A T L
Sbjct: 243 AHTLALTDEGL 253
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
H + T +G +Y +G+ Y +LG+GTT P +V L V V+CG +H++ +A
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145
Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
G+ V+A+G G++G G+T +PTP+
Sbjct: 146 DGE-VFAWGYNNCGQVGSGSTANQPTPR 172
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%)
Query: 395 GGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
G Q P+ A I CG+ H+ +T G LY +G YG+LG G N P
Sbjct: 219 GNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAH 278
Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
++ + VE +C HT +G VY +G
Sbjct: 279 IMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
+ A ++ + I G H LA+++ G ++AWG N+ QLG GN+ N P ++ +
Sbjct: 227 VAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERV 286
Query: 69 IRQVSAGRSHSAA 81
+ + +H++A
Sbjct: 287 VEIAACHSAHTSA 299
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 16 HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIRQVSA 74
+V+++ G+ H +A++ G+VFAWG N+ Q+G G+ N P+ V L K + ++
Sbjct: 129 QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIAC 188
Query: 75 GRSHSAA 81
G++ S A
Sbjct: 189 GQTSSMA 195
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 415 ACGFKHSA----VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
AC F SA VT N ++ FG LG G + VP+++ L ++S+S G
Sbjct: 24 ACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGS 83
Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG--NTGLKP 503
V ++ + VYA+G Y +LG G N G+ P
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAP 118
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 26 HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLALSNKNIRQVSAGRSHSAAWTA 84
HVL + G V+AWG+N +QLG G P Q+ L K + +V+ G HS A A
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
HS ++T+ G L+++G D G+LGHG T + P+ + L + + + +CG NHT+ + +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTEN 193
Query: 480 GKAVYAFGDGEYGKLGLGN 498
G VY FG+ + G+LG GN
Sbjct: 194 G-TVYTFGENKLGQLGQGN 211
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
A ACG H+ +T NG +YTFG G+LG G + + + N + V+CG
Sbjct: 179 AAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEF 238
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTG 500
++ + KG +Y+FG EYG+LG + G
Sbjct: 239 SMIVDCKGN-LYSFGCPEYGQLGHNSDG 265
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 25/106 (23%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW------------KVPERVVALNK- 460
+ACG + S +V G LY+FG +YG+LGH + + +P RV +
Sbjct: 232 VACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEK 291
Query: 461 -----------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
V V+CG NHT+ + D K V+++G G YG+LG
Sbjct: 292 TKDGQVLPVPNVVARDVACGANHTL-VLDSQKRVFSWGFGGYGRLG 336
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 26 HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
H L ++ G++++WG N QLG G+ P+L+ L + I + GR+H+ A T
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191
Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKV---HVESVSCGL 470
+ACG H+ V+ S ++++G G YGRLGH + VP R+V L + CG
Sbjct: 308 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP-RLVKLFDFPGRGATQIYCGY 366
Query: 471 NHTVCIADKG 480
+ +++ G
Sbjct: 367 QCSFALSEMG 376
Score = 37.0 bits (84), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
IV + G H LA++ G V+ +G N QLG GNQ + + + + I +V+ G
Sbjct: 177 IVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGA 236
Query: 77 SHS 79
S
Sbjct: 237 EFS 239
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 14 NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
N+ D++ G H L + + +VF+WG +LG Q + P+LV
Sbjct: 302 NVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV 349
>sp|Q9NB71|HIW_DROME E3 ubiquitin-protein ligase highwire OS=Drosophila melanogaster
GN=hiw PE=1 SV=2
Length = 5233
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ACG H+ V+T G +YTFG+ YG+LG G P RV + V+ G NHT
Sbjct: 971 VACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRVQVPGA--ISQVAAGSNHT 1028
Query: 474 VCIADKGKAVYAFGDGEYGKLGL--GNTGLKPTPQ 506
V + KG VY FG+ + G+LG + GLKP PQ
Sbjct: 1029 VLLTSKG-MVYTFGNYQKGQLGRLPSDYGLKPPPQ 1062
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 463 VESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
V V+CGL+HTV + G+ VY FG +YG+LG G+
Sbjct: 968 VVQVACGLHHTVVLTLAGE-VYTFGSNQYGQLGSGD 1002
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
+V ++ G H + ++ G+V+ +G+N QLG G+ P V I QV+AG
Sbjct: 968 VVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGP--VRVQVPGAISQVAAGS 1025
Query: 77 SHSAAWTA 84
+H+ T+
Sbjct: 1026 NHTVLLTS 1033
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479
HS ++T G L+++G D G+LGHG VP+ + +L +CG NHT+ + +
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTEN 211
Query: 480 GKAVYAFGDGEYGKLGLGN-TGLKPTP 505
G +VYAFG+ + G+LGLGN T P+P
Sbjct: 212 G-SVYAFGENKMGQLGLGNKTDAVPSP 237
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
ACG H+ +T NG +Y FG G+LG G + + N + V+CG ++
Sbjct: 199 ACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEFSM 258
Query: 475 CIADKGKAVYAFGDGEYGKLGLGNTG 500
+ KG +Y+FG EYG+LG + G
Sbjct: 259 IMDCKGN-LYSFGCPEYGQLGHNSDG 283
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 25/106 (23%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN-------------- 459
+ACG + S ++ G LY+FG +YG+LGH + + + + +
Sbjct: 250 VACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEK 309
Query: 460 ----------KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
V V ++CG+NH++ I D K V+++G G YG+LG
Sbjct: 310 TKDGQILPVPNVVVRDIACGINHSL-ILDSQKRVFSWGFGGYGRLG 354
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL 458
IACG HS ++ S ++++G G YGRLGH + VP R+V L
Sbjct: 326 IACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVP-RLVKL 369
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
I + K V + G H LA++ G V+A+G N QLGLGN+ + + + +
Sbjct: 187 IESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQP 246
Query: 69 IRQVSAGRSHS 79
I +V+ G S
Sbjct: 247 ITKVACGAEFS 257
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 26 HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83
H L ++ G++++WG N QLG G+ P+L+ +L + + GR+H+ A T
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALT 209
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 14 NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV--LALSNKNIRQ 71
N+ + DI+ G H L + + +VF+WG +LG Q + P+LV + Q
Sbjct: 320 NVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQ 379
Query: 72 VSAGRSHSAA 81
+ AG + S A
Sbjct: 380 IYAGATCSFA 389
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 395 GGQSVPLTFANRLQYYEAAIAC-GFKHSAVVTSNGYLYTF-----GNGDYGRLGHGTTMN 448
GG++ P + A C G H AVVT LYT+ G+ +G+LGHG +
Sbjct: 336 GGKTTPQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRAS 395
Query: 449 WKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTG 500
++ P+ V L V+ VSCG + TVCI D+G+ +Y+FG YG LG+ +
Sbjct: 396 YRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQ-LYSFGSDYYGCLGVNQSA 446
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA---LNKVHVESVSCGL 470
++CG + +T G LY+FG+ YG LG + +V E ++ LN+ V+ VSCG
Sbjct: 413 VSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEP-VDQVSCGD 471
Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
+H + + + K+VY++G GEYG+LGL + +PQ
Sbjct: 472 SHIMALT-RSKSVYSWGCGEYGRLGLDSEDDVYSPQ 506
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
++CG H +T + +Y++G G+YGRLG + + P++V + + +V CG + +
Sbjct: 467 VSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGS 526
Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
+ GK V A G E+ KLGL
Sbjct: 527 FLLTLTGK-VLACGLNEHNKLGL 548
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYR--EPQLVLAL 64
+H+ + + +S G++ + +++ GQ++++G++ LG+ EP LV
Sbjct: 400 KHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFF 459
Query: 65 SNKNIRQVSAGRSHSAAWT 83
N+ + QVS G SH A T
Sbjct: 460 LNEPVDQVSCGDSHIMALT 478
Score = 39.3 bits (90), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 397 QSVP----LTFANRLQYYE-AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV 451
Q VP LT A +L +Y+ +I+ G H+A + G L TFG+ G+LG G
Sbjct: 562 QEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDY----- 616
Query: 452 PERVVALNKV-------HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
+ + +N + V VSCG T A ++A+G+G G+L +
Sbjct: 617 -RKHLGINLLGGPLGGKQVIRVSCGDEFTT-AATADNHIFAWGNGGNGRLAM 666
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 20 ISVGTEHVLAVSNTGQVFAW-----GNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
+ G H V+ +++ W G+ QLG G++ +YR+P+ V L K++++VS
Sbjct: 356 VCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSC 415
Query: 75 GRSHSAAWT 83
G + T
Sbjct: 416 GSDFTVCIT 424
Score = 35.8 bits (81), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 15/91 (16%)
Query: 5 SGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ-----INYREPQ 59
S + + + + IV++ G++ ++ TG+V A G N +LGL NQ IN+ Q
Sbjct: 504 SPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGL-NQYTAGIINHEAFQ 562
Query: 60 -------LVLA--LSNKNIRQVSAGRSHSAA 81
L LA LS IR +S GR+H+AA
Sbjct: 563 EVPYTTSLTLAKQLSFYKIRSISPGRTHTAA 593
Score = 35.8 bits (81), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
+ F N + +S G H++A++ + V++WG +LGL ++ + PQ V
Sbjct: 456 VDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLC 515
Query: 69 IRQVSAGRSHS 79
I V G S
Sbjct: 516 IVNVCCGSDGS 526
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 12/75 (16%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRL---------GHGTTMNWKVPERVVALNKVHVE 464
++CG + + T++ +++ +GNG GRL G +W P + + HV
Sbjct: 637 VSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRP---IFGSLHHVT 693
Query: 465 SVSCGLNHTVCIADK 479
+SC HT+ I +K
Sbjct: 694 DLSCRGWHTILIVEK 708
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA-LSNKNIRQVSAG 75
I IS G H A+ G++ +G+N QLG+G+ + L+ L K + +VS G
Sbjct: 581 IRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCG 640
Query: 76 RSHSAAWTA 84
+ A TA
Sbjct: 641 DEFTTAATA 649
>sp|Q9Y4D8|HECD4_HUMAN Probable E3 ubiquitin-protein ligase HECTD4 OS=Homo sapiens GN=HECTD4
PE=1 SV=5
Length = 3996
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 215 FAQISRQVVKMKGSDLRL-------PSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSG 267
F Q +RQ+ + S L + P+ A+ ++ GE G F + ++C EL S
Sbjct: 3606 FCQAARQLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSS 3665
Query: 268 AVPLLVRTPNGVADTGYNRDRYILNPD-LSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326
++ LL+ P+ + N+ +YIL P ++ + L+HF LG L G+AIR PLPL L
Sbjct: 3666 SLSLLLLCPSSAVNK--NKGKYILTPSPITYGEEQLLHF--LGQLLGIAIRADVPLPLDL 3721
Query: 327 SPLVWKLIVQEPVT-FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEII---------- 375
P WK +V EP+ DL++ D L ++ I+ EA EI
Sbjct: 3722 LPSFWKTLVGEPLDPEQDLQEADILTYNYVKKFESINDETELEALCAEIASQHLATESPD 3781
Query: 376 ----PLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
P F + TG + + G+ + + + N+ Y AAI
Sbjct: 3782 SPNKPCCRFTYLTMTGEEVELCSRGRHILVAWENK-DIYAAAI 3823
>sp|Q9V853|SMUF1_DROME E3 ubiquitin-protein ligase Smurf1 OS=Drosophila melanogaster
GN=lack PE=1 SV=3
Length = 1061
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 214 IFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLV 273
IF + R ++KM+ D+R + VK GE D GGV + + + E+L+ L
Sbjct: 711 IFEESYRLIMKMRAKDMR---KRLMVKFKGEEGLDYGGVAREWLHLLSREMLNPQYGLFQ 767
Query: 274 RTPNGVADTGYNRDRYI---LNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLV 330
Y+RD + +NPD + L +F F+G G+A+ L +
Sbjct: 768 ----------YSRDDHYTLQINPDSGVNPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPF 817
Query: 331 WKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRIT 390
+K ++ +P+T D+E D +SL + + ++SG+ E+ F + F GA +
Sbjct: 818 YKQLLNKPITLGDIEGVDPDLHRSLTWMLESNISGIIESTFS--VENNSF-GALVVHELK 874
Query: 391 PIVTGGQSVPLTFANRLQYYEAAIACGF 418
P GG S+P+T N+ +Y + + F
Sbjct: 875 P---GGASIPVTEENKREYVKLYVNYRF 899
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHG--TTMNWKVPERVVALNKVHVESVSCGLN 471
++CG SAV+T G L+TFG GD+GRLG G + + P+ V +L + +S G
Sbjct: 343 LSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGG 402
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLG 497
H++ + +KG V++FG + G+LG+G
Sbjct: 403 HSLVLTNKG-LVFSFGRNDQGQLGIG 427
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALN---KVHVESVSCGL 470
I+ G HS+ +T G LYTFG+G G+LGHG ++ P+ V + V S++ G
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGG 252
Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLGN 498
H++ + GK VY++G + +LGLGN
Sbjct: 253 KHSLALTICGK-VYSWGGNDSCQLGLGN 279
Score = 48.9 bits (115), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERV 455
QS P + ++ ++ G HS V+T+ G +++FG D G+LG G N + +P+++
Sbjct: 380 QSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQI 439
Query: 456 VALNK--------VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
+++ VS G H++ I+D YA+G +YG LG
Sbjct: 440 QWFQTSQQQQQQPINIIKVSAGGYHSIAISDNND-TYAWGRSDYGVLG 486
Score = 43.1 bits (100), Expect = 0.005, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLG---------NQINYREPQLVLALSNK 67
I+D+S G H L ++N G VF++G N QLG+G QI + +
Sbjct: 394 IIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPI 453
Query: 68 NIRQVSAGRSHSAA 81
NI +VSAG HS A
Sbjct: 454 NIIKVSAGGYHSIA 467
Score = 43.1 bits (100), Expect = 0.005, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 14 NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN 51
++ +V I+ G +H LA++ G+V++WG N QLGLGN
Sbjct: 242 SLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGN 279
Score = 42.4 bits (98), Expect = 0.008, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGL--KPTPQ 506
K+ + +SCG N + I DKG ++ FG G++G+LGLG L + TP+
Sbjct: 337 KIKIVKLSCGTNRSAVITDKG-LLFTFGRGDHGRLGLGEQSLLMQSTPK 384
Score = 40.8 bits (94), Expect = 0.023, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 15 IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ--INYREPQLVLALSNKNIRQV 72
I IV +S GT +++ G +F +G +LGLG Q + P+LV +L I +
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDM 397
Query: 73 SAGRSHSAAWT 83
S+G HS T
Sbjct: 398 SSGGGHSLVLT 408
Score = 38.1 bits (87), Expect = 0.15, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 14 NIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQ 59
N+ +D+S G +H +A+S G +++WG N+ +LG + N P+
Sbjct: 510 NVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPK 555
Score = 36.6 bits (83), Expect = 0.47, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 305 FKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLS 364
FK LG +F +I KP+P +K ++ V DLE D AQS + +
Sbjct: 1641 FKILGKIFLKSIIDGKPIPDCFPTSFFKYLLGVKVNLRDLEIYDPQLAQSFKKV------ 1694
Query: 365 GVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAI 414
+ N E + FEG ++ GG+S+P+T N+ ++ + I
Sbjct: 1695 -LVLDNIEEYLS-TTFEG---------LIEGGESIPVTDLNKEEFIQRNI 1733
Score = 36.2 bits (82), Expect = 0.58, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK---NIRQVS 73
IV IS G H +++ G ++ +G+ +LG GN +Y P+LV K + ++
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIA 249
Query: 74 AGRSHSAAWT 83
G HS A T
Sbjct: 250 NGGKHSLALT 259
Score = 35.8 bits (81), Expect = 0.80, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 459 NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
N+ + +S G H+ I D+G +Y FGDG GKLG GN +P+
Sbjct: 186 NQQKIVLISTGAIHSSFITDQGN-LYTFGDGLLGKLGHGNLESYSSPK 232
Score = 33.9 bits (76), Expect = 3.1, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 15 IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK----NIR 70
I+I+ +S G H +A+S+ +AWG + LG + VL SN N++
Sbjct: 453 INIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVK 512
Query: 71 --QVSAGRSHSAA 81
VS+G H+ A
Sbjct: 513 FIDVSSGFQHNVA 525
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ACG +A +T G + TFG+G G LGHG+ + P V AL + V+CG +H
Sbjct: 396 VACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHV 455
Query: 474 VCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
+ ++ + + ++A+G G+ G+LGLG PQ
Sbjct: 456 LALSTE-RELFAWGRGDSGRLGLGTRESHSCPQ 487
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
+I G HSA VT++G YTFG+ +G+LG T + P +V L + + V+CG
Sbjct: 565 SIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAF 624
Query: 473 TVCIADKGKAVYAFGDGEYGKLG 495
TV I + + VY++G G G+LG
Sbjct: 625 TVAIGAESE-VYSWGKGARGRLG 646
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
S P L Y +ACG H +++ L+ +G GD GRLG GT + P++V
Sbjct: 432 SQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPM 491
Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+ V CG++ ++ + G+A+ A G + KLGL + L P
Sbjct: 492 PPGQEAQRVVCGIDSSMILTVPGQAL-ACGSNRFNKLGLDHLSLGEEP 538
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
+ A +V ++ G HVLA+S ++FAWG +LGLG + ++ PQ V +
Sbjct: 437 VEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQE 496
Query: 69 IRQVSAGRSHSAAWTAP 85
++V G S T P
Sbjct: 497 AQRVVCGIDSSMILTVP 513
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
++ I +GT H AV+ +G + +G+N QLG + R P V L + V+ G
Sbjct: 563 LLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGD 622
Query: 77 SHSAAWTA 84
+ + A A
Sbjct: 623 AFTVAIGA 630
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 395 GGQSVPLTFANRLQYYEAAIAC-GFKHSAVVTSNGYLYTF-----GNGDYGRLGHGTTMN 448
GG+S P A C G H AVVT LYT+ G +G+LGHG +
Sbjct: 354 GGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKAS 413
Query: 449 WKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
++ P+ V L + VSCG + TVC+ D+G+ +YAFG YG +G+
Sbjct: 414 YRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQ-LYAFGSDYYGCMGV 460
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLN 471
++CG + VT G LY FG+ YG +G +V P ++ VE VSCG N
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDN 490
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
H V + + K VY++G GEYG+LGL + TPQ
Sbjct: 491 HVV-VLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQ 524
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
++CG H V+T N +Y++G G+YGRLG + ++ P++V + + +V CG + T
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGT 544
Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
+ GK V A G E+ KLGL
Sbjct: 545 FLLTQSGK-VLACGLNEFNKLGL 566
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 15/107 (14%)
Query: 398 SVPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
+ T A +L +Y+ IA G H+A + G L TFG G+LG G N+K + +
Sbjct: 585 TTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG---NYK---KRL 638
Query: 457 ALNKV-------HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
+N + V VSCG T+ D ++A+G+G G+L +
Sbjct: 639 GINLLGGPLGGKQVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAM 684
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 2 SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
SG S R + A N H ++V E V+ G G QLG G++ +YR+P+ V
Sbjct: 367 SGCSARQVCA-GNTHFAVVTVEKELYTWVNMQG-----GTKLHGQLGHGDKASYRQPKHV 420
Query: 62 LALSNKNIRQVSAGRSHSAAWT 83
L K IRQVS G + T
Sbjct: 421 EKLQGKAIRQVSCGDDFTVCVT 442
Score = 35.8 bits (81), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
+ +S G HV+ ++ +V++WG +LGL ++ +Y PQ V
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKV 526
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG-------HGTTMNWKVPERVVALNKVHVESV 466
++CG + + T + +++ +GNG GRL HG+ + P R + + HV +
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWP-RPIFGSLHHVPDL 713
Query: 467 SCGLNHTVCIADK 479
SC HT+ I +K
Sbjct: 714 SCRGWHTILIVEK 726
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-------------ALN 459
A+ CG + ++T +G + G ++ +LG M+ + L+
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595
Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
+ +++ G HT I ++G+ + FG + G+LG+GN
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGR-LLTFGCNKCGQLGVGN 633
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 395 GGQSVPLTFANRLQYYEAAIAC-GFKHSAVVTSNGYLYTF-----GNGDYGRLGHGTTMN 448
GG+S P A C G H AVVT LYT+ G +G+LGHG +
Sbjct: 354 GGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKAS 413
Query: 449 WKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
++ P+ V L + VSCG + TVC+ D+G+ +YAFG YG +G+
Sbjct: 414 YRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQ-LYAFGSDYYGCMGV 460
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
++CG H V+T N +Y++G G+YGRLG + ++ P+RV + + +V CG + T
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGT 544
Query: 474 VCIADKGKAVYAFGDGEYGKLGL 496
+ GK V A G E+ KLGL
Sbjct: 545 FLLTQSGK-VLACGLNEFNKLGL 566
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV--PERVVALNKVHVESVSCGLN 471
++CG + VT G LY FG+ YG +G +V P ++ VE VSCG N
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDN 490
Query: 472 HTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
H V + + K VY++G GEYG+LGL + TPQ
Sbjct: 491 HVV-VLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQ 524
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 15/107 (14%)
Query: 398 SVPLTFANRLQYYEA-AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
+ T A +L +Y+ IA G H+A + G L TFG G+LG G N+K + +
Sbjct: 585 TTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG---NYK---KRL 638
Query: 457 ALNKV-------HVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
+N + V VSCG T+ D ++A+G+G G+L +
Sbjct: 639 GINLLGGPLGGKQVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAM 684
Score = 39.7 bits (91), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 2 SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
SG S R + A N H ++V E V+ G G QLG G++ +YR+P+ V
Sbjct: 367 SGCSARQVCA-GNTHFAVVTVEKELYTWVNMQG-----GTKLHGQLGHGDKASYRQPKHV 420
Query: 62 LALSNKNIRQVSAGRSHSAAWT 83
L K I QVS G + T
Sbjct: 421 EKLQGKAIHQVSCGDDFTVCVT 442
Score = 35.8 bits (81), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLV 61
+ +S G HV+ ++ +V++WG +LGL ++ +Y PQ V
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRV 526
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLG-------HGTTMNWKVPERVVALNKVHVESV 466
++CG + + T + +++ +GNG GRL HG+ + P R + + HV +
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWP-RPIFGSLHHVPDL 713
Query: 467 SCGLNHTVCIADK 479
SC HT+ I +K
Sbjct: 714 SCRGWHTILIVEK 726
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-------------ALN 459
A+ CG + ++T +G + G ++ +LG M+ + L+
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595
Query: 460 KVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
+ +++ G HT I ++G+ + FG + G+LG+GN
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGR-LLTFGCNKCGQLGVGN 633
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 382 GASWTGRITPIVTGGQSVPLTFANRLQYYEAA-IACGFKHSAVVTSNGYLYTFGNGDYGR 440
G + G++ T Q P N L IACG S V +G +Y +G G+
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212
Query: 441 LGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLG--N 498
LG G N P RV AL+ + V + CG HT+ + D+G +YA+G YG+LG G N
Sbjct: 213 LGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGSKN 271
Query: 499 TGLKPT 504
L PT
Sbjct: 272 NLLSPT 277
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV-ALNKVHVESVSCGLNH 472
+ACG HS + ++G L+ +G + G++G G+T N P +V L+ V +++CG
Sbjct: 133 VACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTS 192
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
++ + D G+ VY +G G+LGLGN G + TP
Sbjct: 193 SMAVLDSGE-VYGWGYNGNGQLGLGNNGNQLTP 224
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
+V+I+ G +AV ++G+V+ WG N + QLGLGN N P V AL + Q+ G
Sbjct: 183 VVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGY 242
Query: 77 SHSAAWTAPPL 87
+H+ A T L
Sbjct: 243 AHTLALTDEGL 253
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 420 HSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIAD 478
H + T +G +Y +G+ Y +LG+GTT P +V L V V+CG +H++ +A
Sbjct: 86 HVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAA 145
Query: 479 KGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
G+ ++A+G G++G G+T +PTP+
Sbjct: 146 DGE-LFAWGYNNCGQVGSGSTANQPTPR 172
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%)
Query: 395 GGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPER 454
G Q P+ A I CG+ H+ +T G LY +G YG+LG G+ N P +
Sbjct: 219 GNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQ 278
Query: 455 VVALNKVHVESVSCGLNHTVCIADKGKAVYAFG 487
++ + +E +C HT +G VY +G
Sbjct: 279 IMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 16 HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVL-ALSNKNIRQVSA 74
+++++ G+ H +A++ G++FAWG N+ Q+G G+ N P+ V L K + ++
Sbjct: 129 QVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIAC 188
Query: 75 GRSHSAA 81
G++ S A
Sbjct: 189 GQTSSMA 195
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
+ A + + I G H LA+++ G ++AWG N+ QLG G++ N P ++ +
Sbjct: 227 VAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERV 286
Query: 69 IRQVSAGRSHSAA 81
I + +H++A
Sbjct: 287 IEIAACHSTHTSA 299
Score = 38.9 bits (89), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 415 ACGFKHSA----VVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGL 470
AC F SA VT N ++ FG LG G + VP+++ AL ++S+S G
Sbjct: 24 ACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGS 83
Query: 471 NHTVCIADKGKAVYAFGDGEYGKLGLG--NTGLKP 503
V + + VYA+G Y +LG G N G+ P
Sbjct: 84 GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAP 118
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 7 RHIPAFKNIHIVDISVGTE-HVLAVSNTGQVFAWGNNSDAQLGLGNQINYREP-QLVLAL 64
+ + A I +S G+ HVL + G V+AWG+N +QLG G P Q+ L
Sbjct: 66 KKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNL 125
Query: 65 SNKNIRQVSAGRSHSAAWTA 84
K + +V+ G HS A A
Sbjct: 126 LIKQVIEVACGSHHSMALAA 145
>sp|Q9CUN6|SMUF1_MOUSE E3 ubiquitin-protein ligase SMURF1 OS=Mus musculus GN=Smurf1 PE=2
SV=2
Length = 731
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 212 KPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPL 271
+ IF + RQ++KM+ DL+ + VK GE D GGV + + +C E+L+ L
Sbjct: 380 EEIFEESYRQIMKMRPKDLK---KRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGL 436
Query: 272 LVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
+ + + N D I NPD L +F F+G + G+A+ + + +
Sbjct: 437 FQYSTDNIYTLQINPDSSI-NPD------HLSYFHFVGRIMGLAVFHGHYINGGFTVPFY 489
Query: 332 KLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRIT- 390
K ++ +P+ +DLE D +SL I + ++ V + F C E ++ GRI
Sbjct: 490 KQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTF-------CVEHNAF-GRILQ 541
Query: 391 -PIVTGGQSVPLTFANRLQYYEAAIACGF 418
+ G++VP+T N+ +Y + F
Sbjct: 542 HELKPNGRNVPVTEENKKEYVRLYVNWRF 570
>sp|Q9HCE7|SMUF1_HUMAN E3 ubiquitin-protein ligase SMURF1 OS=Homo sapiens GN=SMURF1 PE=1
SV=2
Length = 757
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 24/202 (11%)
Query: 212 KPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPL 271
+ IF + RQ++KM+ DL+ + VK GE D GGV + + +C E+L+ L
Sbjct: 406 EEIFEESYRQIMKMRPKDLK---KRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGL 462
Query: 272 LVRTPNGVADTGYNRDRYIL--NPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPL 329
+ + + Y+L NPD S + L +F F+G + G+A+ + +
Sbjct: 463 FQYSTDNI---------YMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVP 513
Query: 330 VWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRI 389
+K ++ +P+ +DLE D +SL I + ++ V + F C E ++ GRI
Sbjct: 514 FYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTF-------CVEHNAF-GRI 565
Query: 390 T--PIVTGGQSVPLTFANRLQY 409
+ G++VP+T N+ +Y
Sbjct: 566 LQHELKPNGRNVPVTEENKKEY 587
>sp|Q7TPH6|MYCB2_MOUSE Probable E3 ubiquitin-protein ligase MYCBP2 OS=Mus musculus
GN=Mycbp2 PE=1 SV=2
Length = 4711
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
++CGF HS V+ NG +YTFG G +G+LGHG + P V AL + +C NHT
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTACS-NHT 965
Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
+ G+ V+ FG G+LG
Sbjct: 966 AVLLMDGQ-VFTFGSFSKGQLG 986
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 400 PLTFAN--RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
PL FA + + E A+A H A + + G+GD G + P V
Sbjct: 840 PLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDGSGDRGEKDASKITTYP-PGSVRF 898
Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
++ VSCG +H+V + + G VY FG G++G+LG G+ + P
Sbjct: 899 DCELRAVQVSCGFHHSVVLMENGD-VYTFGYGQHGQLGHGDVNSRGCP 945
>sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens
GN=MYCBP2 PE=1 SV=3
Length = 4640
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
++CGF HS V+ NG +YTFG G +G+LGHG + P V AL + V+ G NHT
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 965
Query: 474 VCIADKGKAVYAFGDGEYGKLG 495
+ G+ V+ FG G+LG
Sbjct: 966 AVLLMDGQ-VFTFGSFSKGQLG 986
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 400 PLTFAN--RLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
PL FA + + E A+A H A + + G+G+ G + P V
Sbjct: 840 PLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDGSGERGEKDASKITTYP-PGSVRF 898
Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
++ VSCG +H+V + + G VY FG G++G+LG G+ + P
Sbjct: 899 DCELRAVQVSCGFHHSVVLMENGD-VYTFGYGQHGQLGHGDVNSRGCP 945
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALS 65
+ I +I I+ +S G H LA+S QVF+WG NS QLGLG + + PQ V +L
Sbjct: 120 KKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 66 NKNIRQVSAGRSHSAA 81
+ QV+AG +HS A
Sbjct: 180 GIPLAQVAAGGAHSFA 195
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWK-VPERVVALNKVHVESVSCGLNH 472
++CG +HS V G ++ +G G G+LG G P++++ LN + + VSCG H
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYH 139
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGN 498
++ ++ K V+++G +G+LGLG
Sbjct: 140 SLALS-KDSQVFSWGKNSHGQLGLGK 164
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGN--QINYREPQLVLALSN 66
I A + + + +S G EH LAV + G+VFAWG S+ QLG+G +I++ P+ ++ L++
Sbjct: 69 IQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISF-TPKKIMTLND 127
Query: 67 KNIRQVSAGRSHSAA 81
I QVS G HS A
Sbjct: 128 IKIIQVSCGHYHSLA 142
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTV 474
A G +HS ++ +N + + G+ G+LG ++PE + AL + V+ VSCG H++
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88
Query: 475 CIADKGKAVYAFGDGEYGKLGLGN 498
+ KG+ V+A+G G G+LG+G
Sbjct: 89 AVCHKGR-VFAWGAGSEGQLGIGE 111
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 5 SGRHIP----------AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN 54
SGR++P A KN+ +V IS G H ++ G+VF +G+N QLG
Sbjct: 216 SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE 275
Query: 55 YREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDIPDHY 112
R PQLV + + Q+ G H+ A+ + GH PS + + P+ + +++
Sbjct: 276 KRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENF 332
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
I+CG H+AV+T +G ++TFG+ G+LG+ T + P+ V ++ + V + CG HT
Sbjct: 241 ISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHT 299
Query: 474 VCIADKGKAVYAFGDG 489
+ V +FG G
Sbjct: 300 LAYVHTTGQVVSFGHG 315
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRL---GHGTTMNWKVPERVVALNKVHVESVSC 468
A +A G HS ++ G + +G+ G+L G + P V AL + V +SC
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
G HT + GK V+ FGD G+LG T K PQ
Sbjct: 244 GDAHTAVLTQDGK-VFTFGDNRSGQLGYSPTPEKRGPQ 280
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 2 SGTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQ---INYREP 58
S S + + + + I + ++ G H A+S G F WG+NS QL L + + +P
Sbjct: 168 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKP 227
Query: 59 QLVLALSNKNIRQVSAGRSHSAAWT 83
V AL N + +S G +H+A T
Sbjct: 228 LSVGALKNLGVVYISCGDAHTAVLT 252
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 413 AIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNH 472
+++CG + +T G + TFG+G G LGHG + P+ V AL + VSCG +H
Sbjct: 402 SVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASH 461
Query: 473 TVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTPQ 506
+ + ++ + V+++G G+ G+LGL PQ
Sbjct: 462 VLAVTNE-REVFSWGRGDNGRLGLATQDSHNCPQ 494
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVV 456
QS PL ++ Y I G HS VT G +TFG+ +G+LG + +VP +V
Sbjct: 561 QSAPLN-TEKIVY----IDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVS 615
Query: 457 ALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLG 495
L + + +CG T+ I +G+ VY +G G G+LG
Sbjct: 616 GLQGITM--AACGDAFTLAIGAEGE-VYTWGKGARGRLG 651
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESV 466
L Y ++CG H VT+ ++++G GD GRLG T + P++V + V
Sbjct: 448 LGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRV 507
Query: 467 SCGLNHTVCIADKGKAVYAFGDGEYGKLGL 496
CG++ ++ ++ + + + A G+ + KLGL
Sbjct: 508 LCGVDCSMIMSTQHQ-ILACGNNRFNKLGL 536
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 4 TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLA 63
T + + A +V +S G HVLAV+N +VF+WG + +LGL Q ++ PQ V
Sbjct: 439 TQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSL 498
Query: 64 LSNKNIRQVSAG 75
++ ++V G
Sbjct: 499 PADFEAQRVLCG 510
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
IV I +GT H +AV+ GQ F +G+N QLG ++ + R P V L + I + G
Sbjct: 570 IVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGL--QGITMAACGD 627
Query: 77 SHSAAWTA 84
+ + A A
Sbjct: 628 AFTLAIGA 635
Score = 39.7 bits (91), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSN 66
R + + I +S G +++ G + +G+ S+ LG GN + +P++V AL
Sbjct: 390 RFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLG 449
Query: 67 KNIRQVSAGRSHSAAWT 83
+ QVS G SH A T
Sbjct: 450 YELVQVSCGASHVLAVT 466
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 19/130 (14%)
Query: 384 SW----TGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYG 439
SW GR+ + P + + + CG S ++++ + GN +
Sbjct: 473 SWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFN 532
Query: 440 RLGHGTTMNWKVPERVVALNKVH----VES----------VSCGLNHTVCIADKGKAVYA 485
+LG + P + +VH V+S + G H+V + +KG+ +
Sbjct: 533 KLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQC-FT 591
Query: 486 FGDGEYGKLG 495
FG ++G+LG
Sbjct: 592 FGSNQHGQLG 601
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 461 VHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
V ++SVSCG T C+ D+G + FG G G LG GN
Sbjct: 398 VTIKSVSCGDLFTTCLTDRG-IIMTFGSGSNGCLGHGN 434
>sp|A9JRZ0|SMUF2_DANRE E3 ubiquitin-protein ligase SMURF2 OS=Danio rerio GN=smurf2 PE=2
SV=1
Length = 765
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 30/214 (14%)
Query: 212 KPIFAQISRQVVKMKGSDLRLPSRAWK---VKLLGEGADDAGGVFDDTITEMCGELLSGA 268
+ IF + RQV+KM+ DL WK VK GE D GGV + + + E+L+
Sbjct: 417 EEIFEESYRQVMKMRPKDL------WKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPY 470
Query: 269 VPLLVRTPNGVADTGYNRDRYI---LNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLP 325
L Y+RD +NPD + + + L +F F+G + G+A+ +
Sbjct: 471 YGLF----------QYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGG 520
Query: 326 LSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASW 385
+ +K ++ +P+T D+E D SL I D ++GV + F C E ++
Sbjct: 521 FTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTF-------CVEHNAY 573
Query: 386 TGRIT-PIVTGGQSVPLTFANRLQYYEAAIACGF 418
I + G+S+P+T + +Y + F
Sbjct: 574 GEIIQHELKPNGKSIPVTQDTKKEYVRLYVNWRF 607
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
G HSA +T++G YTFG+ +G+LG + + P RV L + + V+CG TV +
Sbjct: 575 GTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAV 634
Query: 477 ADKGKAVYAFGDGEYGKLG 495
+G+ VY++G G G+LG
Sbjct: 635 GAEGE-VYSWGKGTRGRLG 652
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
+ACG +A +T G + TFG+G G LGHG + P V AL + V+CG +H
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHV 461
Query: 474 VCIADKGK 481
+ ++ G+
Sbjct: 462 LALSTDGE 469
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 398 SVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVA 457
S P L Y +ACG H ++++G L+ +G GD GRLG GT + P++V
Sbjct: 438 SQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPV 497
Query: 458 LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505
+ V CG++ ++ + G+ V A G + KLGL + L P
Sbjct: 498 APGQEAQRVVCGIDSSMILTSPGR-VLACGSNRFNKLGLDHLSLDEEP 544
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 9 IPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN 68
+ A +V ++ G HVLA+S G++FAWG +LGLG + ++ PQ V +
Sbjct: 443 VEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQE 502
Query: 69 IRQVSAGRSHSAAWTAP 85
++V G S T+P
Sbjct: 503 AQRVVCGIDSSMILTSP 519
Score = 35.8 bits (81), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR 76
++ + +GT H A++ +G + +G+N QLG ++ R P V L + V+ G
Sbjct: 569 LLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGD 628
Query: 77 SHSAAWTA 84
+ + A A
Sbjct: 629 AFTVAVGA 636
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVH---VESVSCGL 470
+ACG + V + G +Y++G G GRLG + +P R V L++ H V SVSC
Sbjct: 624 VACGDAFTVAVGAEGEVYSWGKGTRGRLGR-RDEDAGLP-RPVQLDETHPYMVTSVSCCH 681
Query: 471 NHTV 474
+T+
Sbjct: 682 GNTL 685
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 19/123 (15%)
Query: 397 QSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLG--HGTTMNWKVPER 454
Q VP+ Q + CG S ++TS G + G+ + +LG H + VP +
Sbjct: 493 QQVPVAPGQEAQR----VVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQ 548
Query: 455 VVA------------LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLK 502
V L++ + V G H+ I G Y FG ++G+LG + +
Sbjct: 549 QVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDC-YTFGSNQHGQLGTSSRRVS 607
Query: 503 PTP 505
P
Sbjct: 608 RAP 610
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
Query: 395 GGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKV--- 451
GG S PL L +A G A VT +G L + G G GT + V
Sbjct: 325 GGLSSPLRLP-MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGA-GGGTLLPGAVELP 382
Query: 452 -PERVVAL----NKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498
P+ V + V ++ V+CG T C+ D+G + FG G G LG GN
Sbjct: 383 QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRG-IIMTFGSGSNGCLGHGN 433
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCG-L 470
++CG +H+AVVT G LYT+G G YG+LGH T + P RV ++ V++V+CG
Sbjct: 305 VSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPW 364
Query: 471 NHTVCIADKGKA 482
N V +KGK+
Sbjct: 365 NTYVYAVEKGKS 376
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
G +H+ ++ + G ++++G G +G+LGHGT P + AL + + V+ G H+VC+
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCV 225
Query: 477 ADKGKAVYAFGDGEYGKLGL 496
++ G +Y +G E G+L L
Sbjct: 226 SETGD-IYIWGWNESGQLAL 244
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%)
Query: 10 PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
P + + +G EH L + GQVF+WG QLG G EP+L+ AL +
Sbjct: 153 PLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTM 212
Query: 70 RQVSAGRSHS 79
+V+AG HS
Sbjct: 213 AEVAAGGWHS 222
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL 49
R + A + + + +++ G H + VS TG ++ WG N QL L
Sbjct: 202 RLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 244
>sp|Q8IS20|GEFC_DICDI Ras guanine nucleotide exchange factor C OS=Dictyostelium
discoideum GN=gefC PE=2 SV=1
Length = 1457
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 414 IACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHT 473
IA G K++A +T G LY +G ++G LG G T++ + P RV+ L V +++C H+
Sbjct: 419 IATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSSTHS 478
Query: 474 VCIADKGKAVYAFGDG-EYGKL 494
C + GK +Y +G E GK+
Sbjct: 479 ACYTESGK-MYVWGQSDETGKI 499
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 20 ISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHS 79
I+ G ++ A++ G+++ WG N +LGLG+ I+ R P V+ L N+ + ++ +HS
Sbjct: 419 IATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSSTHS 478
Query: 80 AAWT 83
A +T
Sbjct: 479 ACYT 482
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 11 AFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLAL------ 64
A +N + +I +G H++ ++++G+V G N QLG + N EP +V L
Sbjct: 568 ALENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAEN--EPGIVKQLSFDPDG 625
Query: 65 --SNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGL 104
S++ + ++AG HS A +TP + L L L
Sbjct: 626 LNSDEFVVSIAAGEFHSVALVE---------NTPKTKLALQL 658
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 17 IVDISVGTEHVLAVSNTGQVFAWGNNSDAQLG 48
I +++G H++ ++ G V+ WG+NS+ QLG
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Score = 32.7 bits (73), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 430 LYTFGNGDYGRLGHG--TTMNWKVPERVVALNKV--HVESVSCGLNHTVCIAD 478
++TFG+G G LG G T P++V ++ V+ V+CG HTV + D
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTD 55
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 415 ACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVAL--NKVHVESVSCG-LN 471
+CG +H+AVVT G LYT+G G YG+LGH T + P RV ++ V++V+CG N
Sbjct: 306 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWN 365
Query: 472 HTVCIADKGKA 482
V +KGK+
Sbjct: 366 TYVYAVEKGKS 376
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 417 GFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCI 476
G +H+ ++ + G ++++G G +G+LGHGT P + AL + + V+ G H+VC+
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 477 ADKGKAVYAFGDGEYGKLGL 496
++ G +Y +G E G+L L
Sbjct: 226 SETGD-IYIWGWNESGQLAL 244
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%)
Query: 10 PAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNI 69
P + + +G EH L + GQVF+WG QLG G EP+L+ AL +
Sbjct: 153 PLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVM 212
Query: 70 RQVSAGRSHS 79
+V+AG HS
Sbjct: 213 AEVAAGGWHS 222
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 7 RHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGL 49
R + A + + + +++ G H + VS TG ++ WG N QL L
Sbjct: 202 RLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 244
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 409 YYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSC 468
Y + + C F HS ++ G +YT G+G GRLGHG VP V LN + V+
Sbjct: 178 YIKQVVLCKF-HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAA 236
Query: 469 GLNHTVCIADKGKAVYAFGDGEYGKLGL 496
+HTV + + G VY FG + +LG+
Sbjct: 237 AKDHTVVLTEDG-CVYTFGLNIFHQLGI 263
Score = 39.7 bits (91), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 15 IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSA 74
I+I + + H + +S GQV+ G+ +LG G++ P+LV L+ N QV+A
Sbjct: 177 IYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAA 236
Query: 75 GRSHSAAWT 83
+ H+ T
Sbjct: 237 AKDHTVVLT 245
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 430 LYTFGNGDYGRLGHGTTMNWKVPERVVALNK--VHVESVSCGLNHTVCIADKGKAVYAFG 487
+YT+G+ LGHG+ + PE V ++ ++++ V H+V ++ KG+ VY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQ-VYTCG 202
Query: 488 DGEYGKLGLGN 498
G G+LG G+
Sbjct: 203 HGPGGRLGHGD 213
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 24 TEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKN--IRQVSAGRSHSAA 81
T V ++ V+ WG+N++ LG G+Q + P+LV S I+QV + HS
Sbjct: 132 THVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHS-V 190
Query: 82 WTAPPLPPHTPGHTPSSSLRLGLPQ 106
+ + +T GH P L G Q
Sbjct: 191 FLSQKGQVYTCGHGPGGRLGHGDEQ 215
>sp|Q9PUN2|SMUF1_XENLA E3 ubiquitin-protein ligase SMURF1 OS=Xenopus laevis GN=smurf1 PE=2
SV=1
Length = 731
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 20/209 (9%)
Query: 212 KPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPL 271
+ IF + RQ++KM+ DL+ + VK GE D GGV + + +C E+L+ L
Sbjct: 380 EEIFEESYRQIMKMRPKDLK---KRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGL 436
Query: 272 LVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVW 331
+ + + N D I NPD L +F F+G + G+A+ + + +
Sbjct: 437 FQYSTDNIYTLQINPDSSI-NPD------HLSYFHFVGRIMGLAVFHGHYINGGFTVPFY 489
Query: 332 KLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRIT- 390
K ++ +P+ +DLE D +SL I + ++ V + F C E ++ GR+
Sbjct: 490 KQLLGKPIQLSDLESVDPELHKSLVWILENDITSVLDHTF-------CVEHNAF-GRLLQ 541
Query: 391 -PIVTGGQSVPLTFANRLQYYEAAIACGF 418
+ G+++ +T N+ +Y + F
Sbjct: 542 HELKPNGKNLQVTEENKKEYVRLYVNWRF 570
>sp|Q03280|TOM1_YEAST E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=TOM1 PE=1 SV=1
Length = 3268
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 15/197 (7%)
Query: 238 KVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSE 297
++ GE DAGGV + + ++ + L + P+ NR I NP
Sbjct: 2942 EITFKGESGVDAGGVTREWYQVLSRQMFNPDYALFLPVPSDKTTFHPNRTSGI-NP---- 2996
Query: 298 SLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRA 357
+ L FKF+G++ G AIR + L S V+K I+ PV+ D+E D Y +SL
Sbjct: 2997 --EHLSFFKFIGMIIGKAIRDQCFLDCHFSREVYKNILGRPVSLKDMESLDPDYYKSLVW 3054
Query: 358 IRDIHLSGVTEANFPEIIPLECFEGASW-TGRITPIVTGGQSVPLTFANRLQYYEAAIAC 416
I + ++ + E F E + ++ ++ GG+ + +T AN+ Y + +
Sbjct: 3055 ILENDITDIIEETF-------SVETDDYGEHKVINLIEGGKDIIVTEANKQDYVKKVVEY 3107
Query: 417 GFKHSAVVTSNGYLYTF 433
+ S + +L F
Sbjct: 3108 KLQTSVKEQMDNFLVGF 3124
>sp|Q2TAS2|SMUF2_XENLA E3 ubiquitin-protein ligase SMURF2 OS=Xenopus laevis GN=smurf2 PE=2
SV=1
Length = 751
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 30/214 (14%)
Query: 212 KPIFAQISRQVVKMKGSDLRLPSRAWK---VKLLGEGADDAGGVFDDTITEMCGELLSGA 268
+ IF + RQV+KM+ DL WK +K GE D GGV + + + ++L+
Sbjct: 403 EEIFEESYRQVMKMRPKDL------WKRLMIKFRGEEGLDYGGVAREWLYLLSHDMLNPY 456
Query: 269 VPLLVRTPNGVADTGYNRDR-YIL--NPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLP 325
L Y+RD Y L NPD + + + L +F F+G + G+A+ +
Sbjct: 457 YGLF----------QYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGG 506
Query: 326 LSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASW 385
+ +K ++ +P+T D+E D SL I + ++GV + F C E ++
Sbjct: 507 FTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILENDITGVLDHTF-------CVEHNAY 559
Query: 386 TGRIT-PIVTGGQSVPLTFANRLQYYEAAIACGF 418
I + G+S+P+T + +Y + F
Sbjct: 560 GELIQHELKPSGKSIPVTEDTKKEYVRLYVNWRF 593
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 206,573,071
Number of Sequences: 539616
Number of extensions: 9301205
Number of successful extensions: 21911
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 20813
Number of HSP's gapped (non-prelim): 845
length of query: 506
length of database: 191,569,459
effective HSP length: 122
effective length of query: 384
effective length of database: 125,736,307
effective search space: 48282741888
effective search space used: 48282741888
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)