Query psy15270
Match_columns 506
No_of_seqs 204 out of 2952
Neff 10.5
Searched_HMMs 29240
Date Fri Aug 16 16:47:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15270.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15270hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4d9s_A UVB-resistance protein 100.0 3.7E-46 1.3E-50 367.4 15.2 317 3-506 56-373 (406)
2 3kci_A Probable E3 ubiquitin-p 100.0 2.4E-45 8.3E-50 359.7 9.8 315 4-505 42-360 (389)
3 4d9s_A UVB-resistance protein 100.0 6.3E-44 2.2E-48 351.5 15.6 313 4-505 6-320 (406)
4 3mvd_K Regulator of chromosome 100.0 3.7E-43 1.3E-47 349.0 14.5 315 4-505 66-389 (423)
5 3of7_A Regulator of chromosome 100.0 1.1E-42 3.7E-47 349.3 12.8 316 4-505 54-421 (473)
6 1a12_A RCC1, regulator of chro 100.0 3.2E-42 1.1E-46 340.8 12.6 315 3-505 49-380 (413)
7 1a12_A RCC1, regulator of chro 100.0 7.4E-39 2.5E-43 316.7 12.2 318 4-505 2-330 (413)
8 3mvd_K Regulator of chromosome 100.0 2.1E-38 7.3E-43 314.7 10.2 306 12-502 21-334 (423)
9 3kci_A Probable E3 ubiquitin-p 100.0 1.2E-38 4.1E-43 312.3 7.2 298 22-505 8-308 (389)
10 3of7_A Regulator of chromosome 100.0 5.6E-37 1.9E-41 307.9 8.0 327 16-499 11-350 (473)
11 3qhy_B Beta-lactamase inhibito 100.0 1.3E-34 4.3E-39 269.4 9.3 82 5-105 16-97 (282)
12 3h1d_A E3 ubiquitin-protein li 100.0 9.1E-34 3.1E-38 270.6 4.6 251 210-490 53-304 (405)
13 1zvd_A SMAD ubiquitination reg 100.0 3E-33 1E-37 266.8 -0.5 246 210-489 30-279 (380)
14 1nd7_A WW domain-containing pr 100.0 4.7E-33 1.6E-37 265.2 0.1 244 210-485 29-276 (374)
15 3olm_A E3 ubiquitin-protein li 100.0 1.3E-32 4.3E-37 266.0 -2.7 246 210-489 80-329 (429)
16 1c4z_A E6AP, ubiquitin-protein 100.0 1.5E-31 5E-36 253.1 0.1 247 209-490 10-265 (358)
17 2oni_A E3 ubiquitin-protein li 100.0 4.7E-32 1.6E-36 259.2 -4.2 247 210-490 48-300 (392)
18 3qhy_B Beta-lactamase inhibito 99.9 3.5E-28 1.2E-32 225.9 8.4 74 15-105 63-136 (282)
19 4gbf_A Phikz131; 7-bladed beta 96.7 0.0012 4E-08 56.9 4.1 65 16-94 310-374 (400)
20 4gbf_A Phikz131; 7-bladed beta 90.7 0.77 2.6E-05 39.8 7.4 69 412-494 312-380 (400)
21 1k3i_A Galactose oxidase precu 37.6 52 0.0018 33.5 6.6 72 25-101 458-534 (656)
22 1gxr_A ESG1, transducin-like e 20.6 1.4E+02 0.0048 26.3 5.8 73 19-94 6-79 (337)
No 1
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=100.00 E-value=3.7e-46 Score=367.43 Aligned_cols=317 Identities=22% Similarity=0.339 Sum_probs=226.3
Q ss_pred CCCceeeCCCCCCCEEEEEcCCCceEEEecCC-CEEEEeCCCCCCCCCCCCCCcCcCEEeccCCCCCEEEEEcCCCceEE
Q psy15270 3 GTSGRHIPAFKNIHIVDISVGTEHVLAVSNTG-QVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAA 81 (506)
Q Consensus 3 ~~~P~~v~~l~~~~i~~va~G~~Ht~al~~~G-~vy~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~Ia~G~~hs~a 81 (506)
+.+|++|+.+++.+|++|+||..|++||+.+| +||+||.|.+||||+++..+..+|++|..+.+.+|++|+||.+|++|
T Consensus 56 ~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~a 135 (406)
T 4d9s_A 56 RPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 135 (406)
T ss_dssp EEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEE
T ss_pred CcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEE
Confidence 35799999999999999999999999999986 99999999999999999999999999999988899999999999999
Q ss_pred EeCCCCceecCCCCCCCCCccCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHhhhhhhccceeCCCCCccccccccccc
Q psy15270 82 WTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSW 161 (506)
Q Consensus 82 l~~~G~vy~~WG~~~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 161 (506)
|+++|+|| +||. |.+||||++...+...|.... .
T Consensus 136 lt~~G~v~-~wG~--n~~GqLG~g~~~~~~~p~~v~----------------------~--------------------- 169 (406)
T 4d9s_A 136 VTMEGEVQ-SWGR--NQNGQLGLGDTEDSLVPQKIQ----------------------A--------------------- 169 (406)
T ss_dssp EETTSCEE-EEEC--CTTSTTCSSSCCCEEEEEECG----------------------G---------------------
T ss_pred EcCCCcEE-EeCC--CCCccCCCCCCCCcccceEec----------------------c---------------------
Confidence 99999999 9999 999999976433222211000 0
Q ss_pred ccccCccccccccccchHHHHHHhhhcccCCCCCCeEEEecccccCCCCCccHHHHHHHHHhcCCCCCccCCCceEEEEE
Q psy15270 162 LVHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKL 241 (506)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~f 241 (506)
+.. ..+.. ...+.. ..-+
T Consensus 170 -----~~~---~~i~~----------va~G~~--------------------------------------------hs~a 187 (406)
T 4d9s_A 170 -----FEG---IRIKM----------VAAGAE--------------------------------------------HTAA 187 (406)
T ss_dssp -----GTT---CCEEE----------EEECSS--------------------------------------------EEEE
T ss_pred -----cCC---CcEEE----------EecCCC--------------------------------------------eEEE
Confidence 000 00000 000000 0001
Q ss_pred ecccccCCCCchHHHHHHHHHHhcCCCCCceEeCCCCCCCCCCCcceEEeCCCCCCchhhhhHHHHHHHHHHhhhcCCCC
Q psy15270 242 LGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKP 321 (506)
Q Consensus 242 ~ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~n~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~G~~~~~a~~~~~~ 321 (506)
...+..+|.|+.|..+++|.+.......|........ -++..+++...+.
T Consensus 188 -----------------------lt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~-------~~i~~va~G~~ht 237 (406)
T 4d9s_A 188 -----------------------VTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGG-------EKMSMVACGWRHT 237 (406)
T ss_dssp -----------------------EETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTT-------CCEEEEEECSSEE
T ss_pred -----------------------EeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCC-------ceEEEEEECCCcE
Confidence 1123368899999888887765433322222211000 1234455666666
Q ss_pred cCCCCChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCCCcCcccccccCcceeeecCCCCccccccCCCceee
Q psy15270 322 LPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPL 401 (506)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~l~~~g~~~~v 401 (506)
+.+.-...+|.|..+..-.+..-.. .. ...|.
T Consensus 238 ~~l~~~G~v~~wG~n~~GqlG~g~~--------------------~~----------------------------~~~p~ 269 (406)
T 4d9s_A 238 ISVSYSGALYTYGWSKYGQLGHGDL--------------------ED----------------------------HLIPH 269 (406)
T ss_dssp EEEETTCCEEEEECCTTSTTCSSSC--------------------CC----------------------------EEEEE
T ss_pred EEEcCCCCEEEeeCCCCCCCCCCCC--------------------cC----------------------------ccccE
Confidence 6666666666665544332211100 00 00111
Q ss_pred eeccchhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCCCCCcccccEEeeccCCCcEEEEEecCCcceEEEecCC
Q psy15270 402 TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGK 481 (506)
Q Consensus 402 ~~~n~~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~~~~~~~~P~~v~~l~~~~v~~i~~G~~ht~~~~~~~g 481 (506)
.........+.+|+||.+|++||+++|+||+||.|.+||||+++......|.++..+...+|++|+||..|+ +++++++
T Consensus 270 ~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G~~hs-~alt~~G 348 (406)
T 4d9s_A 270 KLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT-LAVTERN 348 (406)
T ss_dssp ECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEECSSEE-EEEETTS
T ss_pred EecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeCCCeE-EEEeCCC
Confidence 111111112567999999999999999999999999999999999999999999877777899999999997 7888999
Q ss_pred cEEEEEcCCCCcccCCCCCCCCCCC
Q psy15270 482 AVYAFGDGEYGKLGLGNTGLKPTPQ 506 (506)
Q Consensus 482 ~vy~wG~n~~GqLG~g~~~~~~~P~ 506 (506)
+||+||+|++||||+|++.++..|+
T Consensus 349 ~v~~wG~n~~GqLG~g~~~~~~~P~ 373 (406)
T 4d9s_A 349 NVFAWGRGTNGQLGIGESVDRNFPK 373 (406)
T ss_dssp CEEEEECCTTSTTCSSSCCCEEEEE
T ss_pred CEEEecCCCCCccCCCCCCCCcCCE
Confidence 9999999999999999998887763
No 2
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-45 Score=359.73 Aligned_cols=315 Identities=24% Similarity=0.349 Sum_probs=222.0
Q ss_pred CCceeeCCCCCCCEEEEEcCCCceEEEecCCCEEEEeCCCCCCCCCCCCCCcCcCEEeccCCCC--CEEEEEcCCCceEE
Q psy15270 4 TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNK--NIRQVSAGRSHSAA 81 (506)
Q Consensus 4 ~~P~~v~~l~~~~i~~va~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~--~i~~Ia~G~~hs~a 81 (506)
..|+.|+.+++.+|++|+||..|+++|+++|+||+||.|.+||||+++..+..+|++|+.+... ++++|+||.+|++|
T Consensus 42 ~~p~~v~~~~~~~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~a 121 (389)
T 3kci_A 42 KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLA 121 (389)
T ss_dssp EEEEECHHHHHTCEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEE
T ss_pred cCCEecccccCCceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEE
Confidence 4688899999999999999999999999999999999999999999999999999999988764 45899999999999
Q ss_pred EeCCCCceecCCCCCCCCCccCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHhhhhhhccceeCCCCCccccccccccc
Q psy15270 82 WTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSW 161 (506)
Q Consensus 82 l~~~G~vy~~WG~~~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 161 (506)
|+++|+|| +||. |.+||||.+...+...|....
T Consensus 122 l~~~G~v~-~wG~--n~~GqLG~g~~~~~~~p~~v~-------------------------------------------- 154 (389)
T 3kci_A 122 LSSEGEVY-SWGE--AEDGKLGHGNRSPCDRPRVIE-------------------------------------------- 154 (389)
T ss_dssp EETTSCEE-EEEC--CGGGTTCSSSCCCEEEEEECG--------------------------------------------
T ss_pred EcCCCCEE-EEeC--CCCCcCCCCCCccCcCCeEec--------------------------------------------
Confidence 99999999 9999 999999976433222111000
Q ss_pred ccccCccccccccccchHHHHHHhhhcccCCCCCCeEEEecccccCCCCCccHHHHHHHHHhcCCCCCccCCCceEEEEE
Q psy15270 162 LVHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKL 241 (506)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~f 241 (506)
.+.. ..+.. ...+.. ..-.
T Consensus 155 ----~l~~---~~i~~----------va~G~~--------------------------------------------hs~a 173 (389)
T 3kci_A 155 ----SLRG---IEVVD----------VAAGGA--------------------------------------------HSAC 173 (389)
T ss_dssp ----GGTT---SCEEE----------EEECSS--------------------------------------------EEEE
T ss_pred ----ccCC---CeEEE----------EEeCcC--------------------------------------------eEEE
Confidence 0000 00000 000000 0000
Q ss_pred ecccccCCCCchHHHHHHHHHHhcCCCCCceEeCCCCCCCCCCCcceEEeCCCCCCchhhhhHHHHHHHHHHhhhc--CC
Q psy15270 242 LGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIR--TK 319 (506)
Q Consensus 242 ~ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~n~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~G~~~~~a~~--~~ 319 (506)
...+..+|.|+.|..+++|.........|........ -++..+++. +.
T Consensus 174 -----------------------lt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~-------~~v~~ia~G~g~~ 223 (389)
T 3kci_A 174 -----------------------VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-------HRVVDIACGSGDA 223 (389)
T ss_dssp -----------------------EETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTT-------SCEEEEEECCSSC
T ss_pred -----------------------EeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCC-------CeEEEEEEcCCCc
Confidence 1123368899999888888765544433333211100 012333333 34
Q ss_pred CCcCCCCChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCCCcCcccccccCcceeeecCCCCccccccCCCce
Q psy15270 320 KPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSV 399 (506)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~l~~~g~~~ 399 (506)
+.+.+.-...+|.|..+..-.+..-.. .....
T Consensus 224 ~t~~l~~~G~v~~wG~n~~GqLG~g~~------------------------------------------------~~~~~ 255 (389)
T 3kci_A 224 QTLCLTDDDTVWSWGDGDYGKLGRGGS------------------------------------------------DGCKV 255 (389)
T ss_dssp EEEEEETTTEEEEEECCGGGTTSSSSC------------------------------------------------CCEEE
T ss_pred EEEEEccCCEEEEEeCCCCCCCCCCCC------------------------------------------------CCccc
Confidence 555555556666655543222211000 00011
Q ss_pred eeeeccchhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCCCCCcccccEEeeccCCCcEEEEEecCCcceEEEec
Q psy15270 400 PLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADK 479 (506)
Q Consensus 400 ~v~~~n~~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~~~~~~~~P~~v~~l~~~~v~~i~~G~~ht~~~~~~ 479 (506)
|..........++.|+||.+|++||+++|+||+||.|.+||||+++......|.++..+.+.+|++|+||..|+ +++++
T Consensus 256 p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~-~al~~ 334 (389)
T 3kci_A 256 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHC-VCCTE 334 (389)
T ss_dssp EEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEE-EEEET
T ss_pred cEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccCeE-EEECC
Confidence 11111111112567999999999999999999999999999999998888899999988888999999999997 78899
Q ss_pred CCcEEEEEcCCCCcccCCCCCCCCCC
Q psy15270 480 GKAVYAFGDGEYGKLGLGNTGLKPTP 505 (506)
Q Consensus 480 ~g~vy~wG~n~~GqLG~g~~~~~~~P 505 (506)
+++||+||+|++||||+|++.+..+|
T Consensus 335 ~G~v~~wG~n~~GqLG~g~~~~~~~P 360 (389)
T 3kci_A 335 DGEVYTWGDNDEGQLGDGTTNAIQRP 360 (389)
T ss_dssp TCCEEEEECCTTSTTCSSSCCCEEEE
T ss_pred CCCEEEeeCCCCCcCCCCCCCCccCc
Confidence 99999999999999999999887766
No 3
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=100.00 E-value=6.3e-44 Score=351.47 Aligned_cols=313 Identities=22% Similarity=0.315 Sum_probs=216.0
Q ss_pred CCceeeCCCCCCCEEEEEcCCCceEEEecCCCEEEEeCCCCCCCCCCCCCCcCcCEEeccCCCCCEEEEEcCCCceEEEe
Q psy15270 4 TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWT 83 (506)
Q Consensus 4 ~~P~~v~~l~~~~i~~va~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~Ia~G~~hs~al~ 83 (506)
..|..|+... .+|++||||..|++||+++|+||+||+|.+||||+++..+...|++|+.+.+.+|++|+||.+||+||+
T Consensus 6 ~~~~~v~~~~-~~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~ 84 (406)
T 4d9s_A 6 MAADEVTAPP-RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYS 84 (406)
T ss_dssp ---------C-CCEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEE
T ss_pred cccccCCCCc-cceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEE
Confidence 4455555543 489999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred CCC-CceecCCCCCCCCCccCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHhhhhhhccceeCCCCCcccccccccccc
Q psy15270 84 APP-LPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWL 162 (506)
Q Consensus 84 ~~G-~vy~~WG~~~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 162 (506)
++| +|| +||. |.+||||.+.......|.... .
T Consensus 85 ~~gg~v~-~wG~--n~~GqLG~g~~~~~~~p~~v~-------------------------------------------~- 117 (406)
T 4d9s_A 85 QSGMEVY-SWGW--GDFGRLGHGNSSDLFTPLPIK-------------------------------------------A- 117 (406)
T ss_dssp TTTTEEE-EEEC--CGGGTTCSSSCCCEEEEEECG-------------------------------------------G-
T ss_pred CCCCEEE-EEcC--CCCcCCCCCCCCccccceEec-------------------------------------------c-
Confidence 986 999 9999 999999976332211110000 0
Q ss_pred cccCccccccccccchHHHHHHhhhcccCCCCCCeEEEecccccCCCCCccHHHHHHHHHhcCCCCCccCCCceEEEEEe
Q psy15270 163 VHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLL 242 (506)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~f~ 242 (506)
+.. ..+.. ...+.. ..-+
T Consensus 118 ----l~~---~~i~~----------ia~G~~--------------------------------------------h~~a- 135 (406)
T 4d9s_A 118 ----LHG---IRIKQ----------IACGDS--------------------------------------------HCLA- 135 (406)
T ss_dssp ----GTT---CCEEE----------EEECSS--------------------------------------------EEEE-
T ss_pred ----cCC---CCEEE----------EEEChh--------------------------------------------heEE-
Confidence 000 00000 000000 0000
Q ss_pred cccccCCCCchHHHHHHHHHHhcCCCCCceEeCCCCCCCCCCCcceEEeCCCCCCchhhhhHHHHHH-HHHHhhhcCCCC
Q psy15270 243 GEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLG-ILFGVAIRTKKP 321 (506)
Q Consensus 243 ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~n~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~G-~~~~~a~~~~~~ 321 (506)
...+..+|.|+.|..+++|.+.......|....... + ++..+++...+.
T Consensus 136 ----------------------lt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~--------~~~i~~va~G~~hs 185 (406)
T 4d9s_A 136 ----------------------VTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFE--------GIRIKMVAAGAEHT 185 (406)
T ss_dssp ----------------------EETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGT--------TCCEEEEEECSSEE
T ss_pred ----------------------EcCCCcEEEeCCCCCccCCCCCCCCcccceEecccC--------CCcEEEEecCCCeE
Confidence 122336899999999888877554333333221110 1 244556666777
Q ss_pred cCCCCChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCCCcCcccccccCcceeeecCCCCccccccCCCceee
Q psy15270 322 LPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPL 401 (506)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~l~~~g~~~~v 401 (506)
+.+.-...+|.|..+..-.+..-... . .. .|.
T Consensus 186 ~alt~~G~v~~wG~n~~GqlG~g~~~--------------------~----~~------------------------~p~ 217 (406)
T 4d9s_A 186 AAVTEDGDLYGWGWGRYGNLGLGDRT--------------------D----RL------------------------VPE 217 (406)
T ss_dssp EEEETTSCEEEEECCTTSTTCSSSSC--------------------C----EE------------------------EEE
T ss_pred EEEeCCCCEEEeeCCCCCCCCCCCCC--------------------C----cC------------------------ccE
Confidence 77766666776655443222111000 0 00 000
Q ss_pred eeccchhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCCCCCcccccEEeeccCCCcEEEEEecCCcceEEEecCC
Q psy15270 402 TFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGK 481 (506)
Q Consensus 402 ~~~n~~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~~~~~~~~P~~v~~l~~~~v~~i~~G~~ht~~~~~~~g 481 (506)
.........+..|+||.+|+++|+++|+||+||.|.+||||+++......|.++..+.+..|++|+||..|+ +++++++
T Consensus 218 ~v~~~~~~~i~~va~G~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs-~alt~~G 296 (406)
T 4d9s_A 218 RVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHT-MALTSDG 296 (406)
T ss_dssp ECCCSTTCCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEE-EEEETTS
T ss_pred EecccCCceEEEEEECCCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEecCCEE-EEEcCCC
Confidence 000000111456999999999999999999999999999999999899999999988888999999999997 7889999
Q ss_pred cEEEEEcCCCCcccCCCCCCCCCC
Q psy15270 482 AVYAFGDGEYGKLGLGNTGLKPTP 505 (506)
Q Consensus 482 ~vy~wG~n~~GqLG~g~~~~~~~P 505 (506)
+||+||+|.+||||+|++.+..+|
T Consensus 297 ~v~~wG~n~~GqLG~g~~~~~~~p 320 (406)
T 4d9s_A 297 KLYGWGWNKFGQVGVGNNLDQCSP 320 (406)
T ss_dssp CEEEEECCTTSTTCSSSSSCEEEE
T ss_pred eEEEeeCCCCCCCCCCCCCCCccC
Confidence 999999999999999998777655
No 4
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=100.00 E-value=3.7e-43 Score=349.04 Aligned_cols=315 Identities=19% Similarity=0.231 Sum_probs=203.3
Q ss_pred CCceeeCCCCCCCEEEEEcCCCceEEEecCCCEEEEeCCCCCCCCCCCCCC--cCcCEEeccCCCCCEEEEEcCCCceEE
Q psy15270 4 TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN--YREPQLVLALSNKNIRQVSAGRSHSAA 81 (506)
Q Consensus 4 ~~P~~v~~l~~~~i~~va~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~~--~~~P~~v~~l~~~~i~~Ia~G~~hs~a 81 (506)
.+|++|+.+.+ |++|+||..|++||+++|+||+||.|.+||||+++..+ ...|++|.... +|++|+||.+||+|
T Consensus 66 ~~p~~v~~l~~--v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~--~i~~va~G~~hs~a 141 (423)
T 3mvd_K 66 KRLSPVAGIPD--AVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPG--KALCISAGDSHSAC 141 (423)
T ss_dssp EEEEECCSCSS--EEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSS--CEEEEEECSSEEEE
T ss_pred cCCeEccCCCC--ceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCC--CEEEEEcCcCeEEE
Confidence 47999999876 89999999999999999999999999999999998875 78999998655 89999999999999
Q ss_pred EeCCCCceecCCCCCCCCCccCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHhhhhhhccceeCCCCCccccccccccc
Q psy15270 82 WTAPPLPPHTPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSW 161 (506)
Q Consensus 82 l~~~G~vy~~WG~~~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 161 (506)
|+++|+|| +||.+||.+||||.+.......|... .
T Consensus 142 l~~~G~v~-~wG~~~n~~GqlG~~~~~~~~~p~~~------------------------------~-------------- 176 (423)
T 3mvd_K 142 LLEDGRVF-AWGSFRDSHGNMGLTIDGNKRTPIDL------------------------------M-------------- 176 (423)
T ss_dssp EETTSCEE-EEECEECSSSEEESBTTBCEEEEEES------------------------------S--------------
T ss_pred EeCCCeEE-EEeCCCCCCCCcCcCCCCCCceeeEe------------------------------c--------------
Confidence 99999999 99988899999997633221111000 0
Q ss_pred ccccCccccccccccchHHHHHHhhhcccCCCCCCeEEEecccccCCCCCccHHHHHHHHHhcCCCCCccCCCceEEEEE
Q psy15270 162 LVHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKL 241 (506)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~f 241 (506)
. . ..+.. ...+.. ..-+
T Consensus 177 --~--~-----~~i~~----------va~G~~--------------------------------------------hs~a 193 (423)
T 3mvd_K 177 --E--G-----TVCCS----------IASGAD--------------------------------------------HLVI 193 (423)
T ss_dssp --T--T-----CCEEE----------EEECSS--------------------------------------------EEEE
T ss_pred --C--C-----CcEEE----------EecCCC--------------------------------------------eEEE
Confidence 0 0 00000 000000 0000
Q ss_pred ecccccCCCCchHHHHHHHHHHhcCCCCCceEeCCCCCCCCCCCcceEEeCCCCC-----CchhhhhHHHHHHHHHHhhh
Q psy15270 242 LGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLS-----ESLQSLMHFKFLGILFGVAI 316 (506)
Q Consensus 242 ~ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~n~~~~~g~~~~~~~~~p~~~-----~~~~~~~~~~~~G~~~~~a~ 316 (506)
...+..+|.|+.|..+++|.........+... ..+..+.... .-.+..++.
T Consensus 194 -----------------------lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~-~~~v~~i~~ 249 (423)
T 3mvd_K 194 -----------------------LTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITR-AKPFEAIWA 249 (423)
T ss_dssp -----------------------EETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTT-CCCEEEEEE
T ss_pred -----------------------EecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecC-CccEEEEEE
Confidence 11223678888888888876533111000000 0000000000 000112222
Q ss_pred cCCCCcCC-CCChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCCCcCcccccccCcceeeecCCCCccccccC
Q psy15270 317 RTKKPLPL-PLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTG 395 (506)
Q Consensus 317 ~~~~~l~~-~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~l~~~ 395 (506)
...+.+.+ .-...+|.|..+..-.+..-.. .... .
T Consensus 250 g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~-----------------------~~~~-----~---------------- 285 (423)
T 3mvd_K 250 TNYCTFMRESQTQVIWATGLNNFKQLAHETK-----------------------GKEF-----A---------------- 285 (423)
T ss_dssp ETTEEEEEETTTCCEEEEEECTTCTTSSCCT-----------------------TCSE-----E----------------
T ss_pred CCcEEEEEECCCCeEEEEeCCCCCcCCCCCC-----------------------CCce-----e----------------
Confidence 22222222 2233344443332221111000 0000 0
Q ss_pred CCceeeeeccchhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCCCCCcc-cccEEeeccCCCcEEEEEecCCcce
Q psy15270 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW-KVPERVVALNKVHVESVSCGLNHTV 474 (506)
Q Consensus 396 g~~~~v~~~n~~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~~~~~~-~~P~~v~~l~~~~v~~i~~G~~ht~ 474 (506)
..|+... .. -+..|+||.+|++||+++|+||+||.|.+||||+++.... ..|+.+..+.. .|++|+||..|+
T Consensus 286 --~~p~~~~-~~--~v~~ia~G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~-~v~~ia~G~~hs- 358 (423)
T 3mvd_K 286 --LTPIKTE-LK--DIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE-KIVSVGCGEVCS- 358 (423)
T ss_dssp --EEEEEEC-CC--SEEEEEECSSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCS-CEEEEEEETTEE-
T ss_pred --eeeEEcC-CC--CeEEEEcccCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCC-CEEEEEcCCCeE-
Confidence 0111111 00 1457999999999999999999999999999999987663 57888877776 899999999997
Q ss_pred EEEecCCcEEEEEcCCCCcccCCCCCCCCCC
Q psy15270 475 CIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505 (506)
Q Consensus 475 ~~~~~~g~vy~wG~n~~GqLG~g~~~~~~~P 505 (506)
++++++|+||+||+|++||||+|++.++.+|
T Consensus 359 ~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P 389 (423)
T 3mvd_K 359 YAVTIDGKLYSWGSGVNNQLGVGDGDDELEP 389 (423)
T ss_dssp EEEETTSCEEEEECCTTSCSSSSSSCCEEEE
T ss_pred EEEcCCCCEEEECCCCCCCCCCCCCCCcccC
Confidence 7889999999999999999999999887776
No 5
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-42 Score=349.32 Aligned_cols=316 Identities=19% Similarity=0.219 Sum_probs=207.3
Q ss_pred CCceeeCCC--CCCCEEEEEcCCCceEEEecCCCEEEEeCCCCCCCCCCCCCC-----------------------cCcC
Q psy15270 4 TSGRHIPAF--KNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-----------------------YREP 58 (506)
Q Consensus 4 ~~P~~v~~l--~~~~i~~va~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~~-----------------------~~~P 58 (506)
.+|++++.+ ++.+|++||||..|++||+++|+||+||.|.+||||+++... ..+|
T Consensus 54 ~~P~~~~~~~~~~~~i~~va~G~~Ht~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 133 (473)
T 3of7_A 54 KRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTP 133 (473)
T ss_dssp EEEEECTTSCTTTTCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSCCC---------------------CCHHHHSC
T ss_pred cCcccccccccCCCCEEEEEeCCCeEEEEecCCeEEEeECCCCCCCCCCCcccccccccccccccCccccccccccccCc
Confidence 468888887 677999999999999999999999999999999999998765 5689
Q ss_pred EEecc--CC----CCCEEEEEcCCCceEEEeCCCCceecCCCCCCCCCccCCCCCC------CCccCCCCCCChHHHHHH
Q psy15270 59 QLVLA--LS----NKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLRLGLPQDI------PDHYGHLQNKPLPLIRAR 126 (506)
Q Consensus 59 ~~v~~--l~----~~~i~~Ia~G~~hs~al~~~G~vy~~WG~~~n~~GqLG~~~~~------~~~~~~~~~~~~~~~~~~ 126 (506)
++|+. ++ +.+|++|+||.+||+||+++|+|| +||..||.+||||..... |..++.+..
T Consensus 134 ~~v~~~~l~~~~~~~~i~~va~G~~hs~alt~~G~vy-~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~--------- 203 (473)
T 3of7_A 134 AKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVY-AWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSK--------- 203 (473)
T ss_dssp EECCGGGCHHHHTTCCEEEEEECSSEEEEEETTSCEE-EEECEEETTEEEESBTTTBSCEEEEEECCCCCS---------
T ss_pred eecccccCCcccCCCcEEEEEccCCEEEEEeCCCeEE-EeeCCcCCCCccCCCCCCCccccCcEEccccCC---------
Confidence 99986 53 568999999999999999999999 999866688999964211 111100000
Q ss_pred HHHHHHHHhhhhhhccceeCCCCCcccccccccccccccCccccccccccchHHHHHHhhhcccCCCCCCeEEEeccccc
Q psy15270 127 LKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTK 206 (506)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~ 206 (506)
..+.. ...+..
T Consensus 204 ----------------------------------------------~~i~~----------va~G~~------------- 214 (473)
T 3of7_A 204 ----------------------------------------------YNIVQ----------LAPGKD------------- 214 (473)
T ss_dssp ----------------------------------------------SCEEE----------EEECSS-------------
T ss_pred ----------------------------------------------CCEEE----------EEecCC-------------
Confidence 00000 000000
Q ss_pred CCCCCccHHHHHHHHHhcCCCCCccCCCceEEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEeCCCCCCCCCCCc
Q psy15270 207 SKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNR 286 (506)
Q Consensus 207 ~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~f~ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~n~~~~~g~~~ 286 (506)
..-+ ...+..+|.|+.|..+++|...
T Consensus 215 -------------------------------hs~a-----------------------lt~~G~v~~wG~n~~GqLG~~~ 240 (473)
T 3of7_A 215 -------------------------------HILF-----------------------LDEEGMVFAWGNGQQNQLGRKV 240 (473)
T ss_dssp -------------------------------EEEE-----------------------EETTSCEEEEECCTTSTTSSCC
T ss_pred -------------------------------eEEE-----------------------EeCCCeEEEEeCCCCCCCCCCc
Confidence 0001 1122368889999888888653
Q ss_pred ceEEeCCCCCCchhhhhHHHHHHHHHHhhhcCCCCcCCCCChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCC
Q psy15270 287 DRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGV 366 (506)
Q Consensus 287 ~~~~~~p~~~~~~~~~~~~~~~G~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~ 366 (506)
......+.. .+..+. +..+..+++...+.+.+.-...+|.|..+..-.+..-...
T Consensus 241 ~~~~~~~~~--~p~~~~----~~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~------------------- 295 (473)
T 3of7_A 241 MERFRLKTL--DPRPFG----LRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDV------------------- 295 (473)
T ss_dssp CGGGTTTTC--SCEECS----CCSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCCCSCC-------------------
T ss_pred ccccccccc--CceecC----CcceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCCCCcc-------------------
Confidence 221000000 000000 0234455666677777766666777665543333211110
Q ss_pred CcCcccccccCcceeeecCCCCccccccCCCceeeeeccchhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCCCC
Q psy15270 367 TEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446 (506)
Q Consensus 367 ~~~~~~~~~~~~~f~~~~~~g~~~~l~~~g~~~~v~~~n~~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~~~ 446 (506)
..... . ..|..........+..|+||.+|++||+++|+||+||.|.+||||++..
T Consensus 296 ~~~~~-~------------------------~~P~~v~~~~~~~i~~ia~G~~hs~~lt~~G~v~~wG~n~~GqLG~~~~ 350 (473)
T 3of7_A 296 EDGAL-V------------------------TKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKD 350 (473)
T ss_dssp CTTCE-E------------------------EEEEECCCCTTCCEEEEEECSSEEEEEETTSCEEEEEECTTCTTCCCGG
T ss_pred cCCce-e------------------------eccccccccCCccEEEEEeCCCeEEEEeCCCeEEEEECCCCCccCCCcc
Confidence 00000 0 0011111111112567999999999999999999999999999998753
Q ss_pred C--------------cccccEEeeccCCCcEEEEEecCCcceEEEecCCcEEEEEcCCCCcccCCC-CCCCCCC
Q psy15270 447 M--------------NWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN-TGLKPTP 505 (506)
Q Consensus 447 ~--------------~~~~P~~v~~l~~~~v~~i~~G~~ht~~~~~~~g~vy~wG~n~~GqLG~g~-~~~~~~P 505 (506)
. ....|..+..+. .|++|+||..|+ ++++++|+||+||+|++||||+|+ ..+..+|
T Consensus 351 ~~~~~~~~~~~~~~~~~~~P~~v~~~~--~v~~Ia~G~~hs-~al~~~G~vy~wG~n~~GqLG~g~~~~~~~~P 421 (473)
T 3of7_A 351 NLPEYTYKDVHGKARAVPLPTKLNNVP--KFKSVAAGSHHS-VAVAQNGIAYSWGFGETYAVGLGPFEDDTEVP 421 (473)
T ss_dssp GCCTTCEECTTSCEEEEEEEEECCSSC--CEEEEEECSSEE-EEEETTSCEEEEECCTTCTTCCCSCCSCEEEE
T ss_pred ccccccccccCCceeeeccCcccCCCC--ceEEEEeCCCeE-EEEeCCCcEEEeeCCCCCCCCCCCCCccccCC
Confidence 1 123566655443 699999999997 788999999999999999999999 5665555
No 6
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=100.00 E-value=3.2e-42 Score=340.78 Aligned_cols=315 Identities=20% Similarity=0.230 Sum_probs=205.2
Q ss_pred CCCceeeCCCCCCCEEEEEcCCCceEEEecCCCEEEEeCCCCCCCCCCCCC--CcCcCEEeccCCCCCEEEEEcCCCceE
Q psy15270 3 GTSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI--NYREPQLVLALSNKNIRQVSAGRSHSA 80 (506)
Q Consensus 3 ~~~P~~v~~l~~~~i~~va~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~--~~~~P~~v~~l~~~~i~~Ia~G~~hs~ 80 (506)
+.+|++|+.+ .+|++|+||..|++||+++|+||+||.|.+||||+++.. +...|++|.... +|++|+||.+||+
T Consensus 49 ~~~P~~v~~~--~~i~~va~G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~l~~--~i~~va~G~~hs~ 124 (413)
T 1a12_A 49 RKKPALVSIP--EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE--KVVQVSAGDSHTA 124 (413)
T ss_dssp EEEEEEECCS--SCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEECCCCS--CEEEEEECSSEEE
T ss_pred cccceEccCC--CCeEEEEeCCCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEecCCC--cEEEEecCCCeEE
Confidence 3579999876 569999999999999999999999999999999999874 477899995433 8999999999999
Q ss_pred EEeCCCCceecCCCCCCCCCccCCCCCCCCc-cCCCCCCChHHHHHHHHHHHHHHhhhhhhccceeCCCCCccccccccc
Q psy15270 81 AWTAPPLPPHTPGHTPSSSLRLGLPQDIPDH-YGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPY 159 (506)
Q Consensus 81 al~~~G~vy~~WG~~~n~~GqLG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 159 (506)
||+++|+|| +||.++|.+||||+....... .|.. + .
T Consensus 125 alt~~G~v~-~wG~~~n~~GqlG~~~~~~~~~~P~~----------------------------v-~------------- 161 (413)
T 1a12_A 125 ALTDDGRVF-LWGSFRDNNGVIGLLEPMKKSMVPVQ----------------------------V-Q------------- 161 (413)
T ss_dssp EEETTSCEE-EEECEEETTEEEESSBBTBCEEEEEE----------------------------E-C-------------
T ss_pred EEcCCCcEE-EeeCCcCCCCccCcCCccccccCCEE----------------------------e-c-------------
Confidence 999999999 999877899999975322110 0000 0 0
Q ss_pred ccccccCccccccccccchHHHHHHhhhcccCCCCCCeEEEecccccCCCCCccHHHHHHHHHhcCCCCCccCCCceEEE
Q psy15270 160 SWLVHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKV 239 (506)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v 239 (506)
. ...+.. ...+.. ..
T Consensus 162 ----~-------~~~i~~----------ia~G~~--------------------------------------------hs 176 (413)
T 1a12_A 162 ----L-------DVPVVK----------VASGND--------------------------------------------HL 176 (413)
T ss_dssp ----C-------SSCEEE----------EEECSS--------------------------------------------EE
T ss_pred ----C-------CCCEEE----------EEecCc--------------------------------------------eE
Confidence 0 000000 000000 00
Q ss_pred EEecccccCCCCchHHHHHHHHHHhcCCCCCceEeCCCCCCCCCCCcceEE-----------eCCCCCCchhhhhHHHHH
Q psy15270 240 KLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRYI-----------LNPDLSESLQSLMHFKFL 308 (506)
Q Consensus 240 ~f~ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~n~~~~~g~~~~~~~-----------~~p~~~~~~~~~~~~~~~ 308 (506)
-+ ...+..+|.|+.|..+++|.....+. ..|........- ....
T Consensus 177 ~a-----------------------lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~P~~v~~~~~g--~~~~ 231 (413)
T 1a12_A 177 VM-----------------------LTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRG--SRGH 231 (413)
T ss_dssp EE-----------------------EETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSS--CCSB
T ss_pred EE-----------------------EcCCCCEEEeeCCCCCccCCCccccccccccccccccccCceEeecccc--ccCC
Confidence 00 11223678888888888876532210 111000000000 0000
Q ss_pred HHHHHhhhcCCCCcCCCCChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCCCcCcccccccCcceeeecCCCC
Q psy15270 309 GILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGR 388 (506)
Q Consensus 309 G~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~ 388 (506)
.++..+++...+.+.+.-...+|.|..+..-.+..-...
T Consensus 232 ~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~----------------------------------------- 270 (413)
T 1a12_A 232 VRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTE----------------------------------------- 270 (413)
T ss_dssp CCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCS-----------------------------------------
T ss_pred ccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCC-----------------------------------------
Confidence 112334444455555554555555544332222110000
Q ss_pred ccccccCCCceeeeeccch--hhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCC-CCCcccccEEeeccCCCcEEE
Q psy15270 389 ITPIVTGGQSVPLTFANRL--QYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG-TTMNWKVPERVVALNKVHVES 465 (506)
Q Consensus 389 ~~~l~~~g~~~~v~~~n~~--~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~-~~~~~~~P~~v~~l~~~~v~~ 465 (506)
....|....... ...+..|+||.+|++||+++|+||+||.|.+||||++ +......|+.+..+. .|++
T Consensus 271 -------~~~~P~~v~~l~~~~~~v~~ia~G~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~--~v~~ 341 (413)
T 1a12_A 271 -------SCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--AVSS 341 (413)
T ss_dssp -------CEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSSS--SEEE
T ss_pred -------cccccEEchhccCCCceEEEEecccceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecccC--ceeE
Confidence 000111111000 0114679999999999999999999999999999999 455667899888776 6999
Q ss_pred EEecCCcceEEEecCCcEEEEEcCCCCcccCCCCCCCCCC
Q psy15270 466 VSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGNTGLKPTP 505 (506)
Q Consensus 466 i~~G~~ht~~~~~~~g~vy~wG~n~~GqLG~g~~~~~~~P 505 (506)
|+||..|+ ++++++++||+||+|++||||+|+..+..+|
T Consensus 342 v~~G~~hs-~alt~~G~v~~wG~n~~gqLG~g~~~~~~~P 380 (413)
T 1a12_A 342 VACGASVG-YAVTKDGRVFAWGMGTNYQLGTGQDEDAWSP 380 (413)
T ss_dssp EEECSSEE-EEEETTSCEEEEECCTTSTTCSSSCSCEEEE
T ss_pred EEECcceE-EEEeCCCCEEEecCCCCCCCCCCCCCCcccC
Confidence 99999997 7888999999999999999999998877666
No 7
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=100.00 E-value=7.4e-39 Score=316.68 Aligned_cols=318 Identities=20% Similarity=0.268 Sum_probs=198.8
Q ss_pred CCceeeCCCCCCCEEEEEcCCCceEEEecCCCEEEEeCCCCCCCCCCCCCC-cCcCEEeccCCCCCEEEEEcCCCceEEE
Q psy15270 4 TSGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQIN-YREPQLVLALSNKNIRQVSAGRSHSAAW 82 (506)
Q Consensus 4 ~~P~~v~~l~~~~i~~va~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~~-~~~P~~v~~l~~~~i~~Ia~G~~hs~al 82 (506)
.+|+.+...+ ..+.+..|+++|+++|+||+||.|.+||||+++..+ ...|++|..+. +|++|+||.+|++||
T Consensus 2 ~~~~~~~~~~-----~~~~~~~h~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~~~--~i~~va~G~~hs~~l 74 (413)
T 1a12_A 2 RSPPADAIPK-----SKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCL 74 (413)
T ss_dssp ----------------CCCCCCCTTCCCCCBEEEEEEECTTSTTCSCTTCCEEEEEEEECCSS--CEEEEEECSSEEEEE
T ss_pred Ccccccccch-----hhhhccccceeecCCCcEEEEECCCCCcCCCCCCccccccceEccCCC--CeEEEEeCCCeEEEE
Confidence 4677666443 455668999999999999999999999999999876 78999998764 899999999999999
Q ss_pred eCCCCceecCCCCCCCCCccCCCCCCC--CccCCCCCCChHHHHHHHHHHHHHHhhhhhhccceeCCCCCcccccccccc
Q psy15270 83 TAPPLPPHTPGHTPSSSLRLGLPQDIP--DHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYS 160 (506)
Q Consensus 83 ~~~G~vy~~WG~~~n~~GqLG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 160 (506)
+++|+|| +||. |.+||||.+.... ...|.. +.+.
T Consensus 75 ~~~G~v~-~wG~--n~~GqLG~~~~~~~~~~~P~~----------------------------v~l~------------- 110 (413)
T 1a12_A 75 SKSGQVY-SFGC--NDEGALGRDTSVEGSEMVPGK----------------------------VELQ------------- 110 (413)
T ss_dssp ETTSCEE-EEEC--CTTSTTCSCCCSTTGGGSCEE----------------------------CCCC-------------
T ss_pred cCCCCEE-EEEC--CCCCCCCCCCCCCccccCCeE----------------------------ecCC-------------
Confidence 9999999 9999 9999999763311 000000 0000
Q ss_pred cccccCccccccccccchHHHHHHhhhcccCCCCCCeEEEecccccCCCCCccHHHHHHHHHhcCCCCCccCCCceEEEE
Q psy15270 161 WLVHPSLRPLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVK 240 (506)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~ 240 (506)
..+.. ...+.. ..-
T Consensus 111 ------------~~i~~----------va~G~~--------------------------------------------hs~ 124 (413)
T 1a12_A 111 ------------EKVVQ----------VSAGDS--------------------------------------------HTA 124 (413)
T ss_dssp ------------SCEEE----------EEECSS--------------------------------------------EEE
T ss_pred ------------CcEEE----------EecCCC--------------------------------------------eEE
Confidence 00000 000000 000
Q ss_pred EecccccCCCCchHHHHHHHHHHhcCCCCCceEeCC--CCCCCCCCCcceE-EeCCCCCCchhhhhHHHHHHHHHHhhhc
Q psy15270 241 LLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTP--NGVADTGYNRDRY-ILNPDLSESLQSLMHFKFLGILFGVAIR 317 (506)
Q Consensus 241 f~ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~--n~~~~~g~~~~~~-~~~p~~~~~~~~~~~~~~~G~~~~~a~~ 317 (506)
+ ...+..+|.|+. |..+++|...... ...|..... ..++..+++.
T Consensus 125 a-----------------------lt~~G~v~~wG~~~n~~GqlG~~~~~~~~~~P~~v~~---------~~~i~~ia~G 172 (413)
T 1a12_A 125 A-----------------------LTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL---------DVPVVKVASG 172 (413)
T ss_dssp E-----------------------EETTSCEEEEECEEETTEEEESSBBTBCEEEEEEECC---------SSCEEEEEEC
T ss_pred E-----------------------EcCCCcEEEeeCCcCCCCccCcCCccccccCCEEecC---------CCCEEEEEec
Confidence 0 111225677776 5555555432211 001111100 0124456666
Q ss_pred CCCCcCCCCChhhhhhhcccCCCcCccccc--hHHHHHHHHHHHhcccCCCCcCcccccccCcceeeecCCCCccccccC
Q psy15270 318 TKKPLPLPLSPLVWKLIVQEPVTFTDLEDN--DTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTG 395 (506)
Q Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~--d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~l~~~ 395 (506)
..+.+.+.-...+|.|..+..-.+...... +......+... ..| +.+++...
T Consensus 173 ~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~---------------~~P-----------~~v~~~~~ 226 (413)
T 1a12_A 173 NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERL---------------LVP-----------KCVMLKSR 226 (413)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHH---------------HSC-----------EECCCBCS
T ss_pred CceEEEEcCCCCEEEeeCCCCCccCCCcccccccccccccccc---------------ccC-----------ceEeeccc
Confidence 777777777777777776654444322110 00000000000 000 00111111
Q ss_pred CCceeeeeccchhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCCCCCcccccEEeeccCC--CcEEEEEecCCcc
Q psy15270 396 GQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNK--VHVESVSCGLNHT 473 (506)
Q Consensus 396 g~~~~v~~~n~~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~~~~~~~~P~~v~~l~~--~~v~~i~~G~~ht 473 (506)
|. .....++.|+||.+|++||+++|+||+||.|.+||||+++......|..+..|.+ ..|++|+||..|+
T Consensus 227 g~--------~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G~~hs 298 (413)
T 1a12_A 227 GS--------RGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT 298 (413)
T ss_dssp SC--------CSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEE
T ss_pred cc--------cCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEecccceE
Confidence 00 0011145699999999999999999999999999999999888889999988776 6799999999997
Q ss_pred eEEEecCCcEEEEEcCCCCcccCCC-CCCCCCC
Q psy15270 474 VCIADKGKAVYAFGDGEYGKLGLGN-TGLKPTP 505 (506)
Q Consensus 474 ~~~~~~~g~vy~wG~n~~GqLG~g~-~~~~~~P 505 (506)
++++++|+||+||+|.+||||+|+ ..+..+|
T Consensus 299 -~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P 330 (413)
T 1a12_A 299 -VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIP 330 (413)
T ss_dssp -EEEETTSCEEEEECCGGGTTCSCTTCCCEEEE
T ss_pred -EEEeCCCCEEEeeCCCCCccCCCCCCccccCC
Confidence 788899999999999999999994 4444444
No 8
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=100.00 E-value=2.1e-38 Score=314.73 Aligned_cols=306 Identities=19% Similarity=0.177 Sum_probs=196.3
Q ss_pred CCCCCEEEEEcCCCceEEEecCCCEEEEeCCCCCCCCCCCCC-CcCcCEEeccCCCCCEEEEEcCCCceEEEeCCCCcee
Q psy15270 12 FKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI-NYREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPH 90 (506)
Q Consensus 12 l~~~~i~~va~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~-~~~~P~~v~~l~~~~i~~Ia~G~~hs~al~~~G~vy~ 90 (506)
....++++||||..|+++|+++|+||+||.|.+||||+++.. +...|.+|+.+. +|++|+||..|++||+++|+||
T Consensus 21 ~~~~~~~~ia~g~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~--~v~~va~G~~h~~~l~~~G~v~- 97 (423)
T 3mvd_K 21 PPKAKRARIAFHLELPKRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIP--DAVDISAGGMHNLVLTKSGDIY- 97 (423)
T ss_dssp --------CCCCCCCCCCCCCCEEEEEEEECTTSTTCSCSSCCEEEEEEECCSCS--SEEEEEECSSEEEEEETTSCEE-
T ss_pred CccceeeEEecCCccceeecCCCcEEEEeCCCCCCCCCCCCCccCcCCeEccCCC--CceEEeeCCCeEEEEeCCCeEE-
Confidence 344578999999999999999999999999999999999764 478899999888 6999999999999999999999
Q ss_pred cCCCCCCCCCccCCCCCCC--CccCCCCCCChHHHHHHHHHHHHHHhhhhhhccceeCCCCCcccccccccccccccCcc
Q psy15270 91 TPGHTPSSSLRLGLPQDIP--DHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLR 168 (506)
Q Consensus 91 ~WG~~~n~~GqLG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 168 (506)
+||. |.+||||.+.... ...|.... +
T Consensus 98 ~wG~--n~~GqLG~~~~~~~~~~~P~~v~----------------------------~---------------------- 125 (423)
T 3mvd_K 98 SFGC--NDEGALGRDTSEDGSESKPDLID----------------------------L---------------------- 125 (423)
T ss_dssp EEEC--CSSSTTCSCCCSTTSSSSCEECC----------------------------C----------------------
T ss_pred EeEC--CCCcCCCCCCcCCccccCCeEEc----------------------------C----------------------
Confidence 9999 9999999763321 11110000 0
Q ss_pred ccccccccchHHHHHHhhhcccCCCCCCeEEEecccccCCCCCccHHHHHHHHHhcCCCCCccCCCceEEEEEecccccC
Q psy15270 169 PLFAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADD 248 (506)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~f~ge~g~d 248 (506)
...+.. ...+.. ..-+
T Consensus 126 ---~~~i~~----------va~G~~--------------------------------------------hs~a------- 141 (423)
T 3mvd_K 126 ---PGKALC----------ISAGDS--------------------------------------------HSAC------- 141 (423)
T ss_dssp ---SSCEEE----------EEECSS--------------------------------------------EEEE-------
T ss_pred ---CCCEEE----------EEcCcC--------------------------------------------eEEE-------
Confidence 000000 000000 0000
Q ss_pred CCCchHHHHHHHHHHhcCCCCCceEeCC--CCCCCCCCCcceEEeCCCCCCchhhhhHHHHHHHHHHhhhcCCCCcCCCC
Q psy15270 249 AGGVFDDTITEMCGELLSGAVPLLVRTP--NGVADTGYNRDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326 (506)
Q Consensus 249 ~gG~~re~~~~~~~~~~~~~~~l~~~~~--n~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~G~~~~~a~~~~~~l~~~~ 326 (506)
...+..+|.|+. |..+++|.......+.|..... .-++..+++...+.+.+.-
T Consensus 142 ----------------l~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~---------~~~i~~va~G~~hs~alt~ 196 (423)
T 3mvd_K 142 ----------------LLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLME---------GTVCCSIASGADHLVILTT 196 (423)
T ss_dssp ----------------EETTSCEEEEECEECSSSEEESBTTBCEEEEEESST---------TCCEEEEEECSSEEEEEET
T ss_pred ----------------EeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecC---------CCcEEEEecCCCeEEEEec
Confidence 112236888887 7777777654443333322200 0124556677777777777
Q ss_pred ChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCCCcCcccccccCcceeeecCCCCccccccCCCceeeeeccc
Q psy15270 327 SPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANR 406 (506)
Q Consensus 327 ~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~l~~~g~~~~v~~~n~ 406 (506)
...+|.|..+..-.+....... ..... .........| ..+.+ .
T Consensus 197 ~G~v~~wG~n~~GqLG~~~~~~------------~~~~~-~~~~~~~~~p-----------~~v~~-------------~ 239 (423)
T 3mvd_K 197 AGKVFTVGCAEQGQLGRLSERS------------ISGEG-RRGKRDLLRP-----------TQLII-------------T 239 (423)
T ss_dssp TSCEEEEECCTTSTTSSCCTTT------------TTSCS-TTTTTTTSSC-----------EEECC-------------T
T ss_pred CCeEEEeeCCcCCccCCCcccc------------ccccc-ccccccccCC-----------eEEee-------------c
Confidence 7777777766544443222100 00000 0000000000 00000 0
Q ss_pred hhhhhhhhhcccceeEEE-eeCCcEEEEecCCCCcccCCCCCc--ccccEEeeccCCCcEEEEEecCCcceEEEecCCcE
Q psy15270 407 LQYYEAAIACGFKHSAVV-TSNGYLYTFGNGDYGRLGHGTTMN--WKVPERVVALNKVHVESVSCGLNHTVCIADKGKAV 483 (506)
Q Consensus 407 ~~~v~~~i~~g~~hs~al-t~~G~v~~wG~n~~gqlg~~~~~~--~~~P~~v~~l~~~~v~~i~~G~~ht~~~~~~~g~v 483 (506)
....+..|+||.+|++++ +++|+||+||.|.++|||.+.... ...|.++. + ..|++|+||..|+ ++++++|+|
T Consensus 240 ~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~-~--~~v~~ia~G~~ht-~alt~~G~v 315 (423)
T 3mvd_K 240 RAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTE-L--KDIRHIAGGQHHT-VILTTDLKC 315 (423)
T ss_dssp TCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEEC-C--CSEEEEEECSSEE-EEEETTCCE
T ss_pred CCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcC-C--CCeEEEEcccCeE-EEEeCCCcE
Confidence 011145699999999999 699999999999999999965443 33555543 3 4699999999997 788999999
Q ss_pred EEEEcCCCCcccCCCCCCC
Q psy15270 484 YAFGDGEYGKLGLGNTGLK 502 (506)
Q Consensus 484 y~wG~n~~GqLG~g~~~~~ 502 (506)
|+||+|++||||+|++.+.
T Consensus 316 ~~wG~n~~GqLG~g~~~~~ 334 (423)
T 3mvd_K 316 SVVGRPEYGRLGLGDVKDV 334 (423)
T ss_dssp EEEECCGGGTTCSSSCCSC
T ss_pred EEEECCCCCCCCCCCcccc
Confidence 9999999999999988653
No 9
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=312.27 Aligned_cols=298 Identities=22% Similarity=0.303 Sum_probs=196.0
Q ss_pred cCCCceEEEecCCCEEEEeCCCCCCCCCCCCCCcCcCEEeccCCCCCEEEEEcCCCceEEEeCCCCceecCCCCCCCCCc
Q psy15270 22 VGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGHTPSSSLR 101 (506)
Q Consensus 22 ~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~Ia~G~~hs~al~~~G~vy~~WG~~~n~~Gq 101 (506)
.=..+.++|++||+||+||+|.+||||.++..+...|+++..+...+|++|+||..|++||+++|+|| +||. |.+||
T Consensus 8 ~~~~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~l~~~G~v~-~wG~--n~~Gq 84 (389)
T 3kci_A 8 SSGRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY-ATGY--GAGGR 84 (389)
T ss_dssp -------------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEEETTEEEEEETTSCEE-EEEC--CGGGT
T ss_pred cCcccceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEeCCCeEEEEcCCCcEE-EEEC--CCCCC
Confidence 34567889999999999999999999999888899999999887778999999999999999999999 9999 99999
Q ss_pred cCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHhhhhhhccceeCCCCCcccccccccccccccCccccccccccchHHH
Q psy15270 102 LGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPLFAPRVYTLPLV 181 (506)
Q Consensus 102 LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (506)
||++.......|.+.. . ........+.
T Consensus 85 LG~g~~~~~~~p~~v~----------------------~--------------------------~~~~~~~~v~----- 111 (389)
T 3kci_A 85 LGIGGTESVSTPTLLE----------------------S--------------------------IQHVFIKKVA----- 111 (389)
T ss_dssp TSSSSSCCEEEEEECG----------------------G--------------------------GTTSCEEEEE-----
T ss_pred CCCCCcCCccCCEEcc----------------------c--------------------------ccCCceeEEE-----
Confidence 9976432222111000 0 0000000000
Q ss_pred HHHhhhcccCCCCCCeEEEecccccCCCCCccHHHHHHHHHhcCCCCCccCCCceEEEEEecccccCCCCchHHHHHHHH
Q psy15270 182 RSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMC 261 (506)
Q Consensus 182 ~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~f~ge~g~d~gG~~re~~~~~~ 261 (506)
...+.. ..-+
T Consensus 112 ------i~~G~~--------------------------------------------h~~a-------------------- 121 (389)
T 3kci_A 112 ------VNSGGK--------------------------------------------HCLA-------------------- 121 (389)
T ss_dssp ------ECTTCS--------------------------------------------EEEE--------------------
T ss_pred ------ECcCCC--------------------------------------------eEEE--------------------
Confidence 000000 0000
Q ss_pred HHhcCCCCCceEeCCCCCCCCCCCcceEEeCCCCCCchhhhhHHHHHH-HHHHhhhcCCCCcCCCCChhhhhhhcccCCC
Q psy15270 262 GELLSGAVPLLVRTPNGVADTGYNRDRYILNPDLSESLQSLMHFKFLG-ILFGVAIRTKKPLPLPLSPLVWKLIVQEPVT 340 (506)
Q Consensus 262 ~~~~~~~~~l~~~~~n~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~G-~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~ 340 (506)
...+..+|.|+.|..+++|.+.......|..... + .+ ++..+++...+.+.+.-...+|.|..+..-.
T Consensus 122 ---l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~------l--~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~Gq 190 (389)
T 3kci_A 122 ---LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES------L--RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 190 (389)
T ss_dssp ---EETTSCEEEEECCGGGTTCSSSCCCEEEEEECGG------G--TTSCEEEEEECSSEEEEEETTSCEEEEECCGGGT
T ss_pred ---EcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecc------c--CCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCC
Confidence 1223368889999888888765543333333211 0 12 3455666677777777666677766544322
Q ss_pred cCccccchHHHHHHHHHHHhcccCCCCcCcccccccCcceeeecCCCCccccccCCCceeeeeccchhhhhhhhhccc--
Q psy15270 341 FTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGF-- 418 (506)
Q Consensus 341 ~~d~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~l~~~g~~~~v~~~n~~~~v~~~i~~g~-- 418 (506)
+..-.. .. . ..|..........+..|+||.
T Consensus 191 LG~~~~--------------------~~----~------------------------~~p~~v~~~~~~~v~~ia~G~g~ 222 (389)
T 3kci_A 191 LGHSDS--------------------ED----Q------------------------LKPKLVEALQGHRVVDIACGSGD 222 (389)
T ss_dssp TCSSSC--------------------CC----E------------------------EEEEECGGGTTSCEEEEEECCSS
T ss_pred cCCCCC--------------------cc----c------------------------ccceEecccCCCeEEEEEEcCCC
Confidence 211100 00 0 001111111111245688884
Q ss_pred ceeEEEeeCCcEEEEecCCCCcccCCCCCcccccEEeeccCCCcEEEEEecCCcceEEEecCCcEEEEEcCCCCcccCCC
Q psy15270 419 KHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEYGKLGLGN 498 (506)
Q Consensus 419 ~hs~alt~~G~v~~wG~n~~gqlg~~~~~~~~~P~~v~~l~~~~v~~i~~G~~ht~~~~~~~g~vy~wG~n~~GqLG~g~ 498 (506)
.|+++|+++|+||+||.|.+||||.++......|.++..+.+..+++|+||..|+ ++++++++||+||+|.+||||+|+
T Consensus 223 ~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs-~alt~~G~v~~wG~n~~GqLG~g~ 301 (389)
T 3kci_A 223 AQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS-VALTKSGAVYTWGKGDYHRLGHGS 301 (389)
T ss_dssp CEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEE-EEEETTSCEEEEECCGGGTTCSSS
T ss_pred cEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEE-EEEeCCCeEEEEeCCCCCCCCCCC
Confidence 8999999999999999999999999998888899999888888999999999997 788999999999999999999999
Q ss_pred CCCCCCC
Q psy15270 499 TGLKPTP 505 (506)
Q Consensus 499 ~~~~~~P 505 (506)
..+..+|
T Consensus 302 ~~~~~~P 308 (389)
T 3kci_A 302 DDHVRRP 308 (389)
T ss_dssp CCCEEEE
T ss_pred CccccCC
Confidence 8776665
No 10
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-37 Score=307.85 Aligned_cols=327 Identities=16% Similarity=0.177 Sum_probs=197.6
Q ss_pred CEEEEEcCCCceEEEecCCCEEEEeCCCCCCCCCCCCC---CcCcCEEeccC--CCCCEEEEEcCCCceEEEeCCCCcee
Q psy15270 16 HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQI---NYREPQLVLAL--SNKNIRQVSAGRSHSAAWTAPPLPPH 90 (506)
Q Consensus 16 ~i~~va~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~---~~~~P~~v~~l--~~~~i~~Ia~G~~hs~al~~~G~vy~ 90 (506)
.|....++..|+++++++|+||+||+|.+||||+|+.. +...|++++.+ ...+|++||||..||+||+++|+||
T Consensus 11 ~~~~~~~~~~h~~~~~~~g~v~~wG~n~~GqLG~G~~~~~~~~~~P~~~~~~~~~~~~i~~va~G~~Ht~alt~~G~v~- 89 (473)
T 3of7_A 11 HIINAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVW- 89 (473)
T ss_dssp TCCCCGGGGHHHHCCSSCCEEEEEEECTTSTTCSCSCGGGGEEEEEEECTTSCTTTTCEEEEEECSSEEEEEETTCCEE-
T ss_pred hhhhhcccccccccCCCCccEEEEcCCCCCccCCCCCcccccccCcccccccccCCCCEEEEEeCCCeEEEEecCCeEE-
Confidence 56677789999999999999999999999999999954 46789988876 4568999999999999999999999
Q ss_pred cCCCCCCCCCccCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHhhhhhhccceeCCCCCcccccccccccccccCcccc
Q psy15270 91 TPGHTPSSSLRLGLPQDIPDHYGHLQNKPLPLIRARLKLLNRFSDLIYQVVRLLPLGNVDQDWVQCTPYSWLVHPSLRPL 170 (506)
Q Consensus 91 ~WG~~~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 170 (506)
+||. |.+||||.+....... +..+..... . ..... .+.. ...
T Consensus 90 ~wG~--n~~GqLG~~~~~~~~~--~~~~~~~~~-------------~---------~~~~~------~~~~------~~~ 131 (473)
T 3of7_A 90 SWGC--NDVGALGRDTSNAKEQ--LKDMDADDS-------------S---------DDEDG------DLNE------LES 131 (473)
T ss_dssp EEEC--CTTSTTCSCCC---------------------------------------------------CCH------HHH
T ss_pred EeEC--CCCCCCCCCCcccccc--ccccccccc-------------C---------ccccc------cccc------ccc
Confidence 9999 9999999864433110 000000000 0 00000 0000 000
Q ss_pred ccccccchHHHHHHhhhcccCCCCCCeEEEecccccCCCCCccHHHHHHHHHhcCCCCCccCCCceEEEEEecccccCCC
Q psy15270 171 FAPRVYTLPLVRSVGKTMLVGKNFGPSVTVRRLTTKSKQTVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAG 250 (506)
Q Consensus 171 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~f~ge~g~d~g 250 (506)
.+..+....+..... .. +...|.. |..-
T Consensus 132 ~P~~v~~~~l~~~~~------~~-----------------------------------------~i~~va~-G~~h---- 159 (473)
T 3of7_A 132 TPAKIPRESFPPLAE------GH-----------------------------------------KVVQLAA-TDNM---- 159 (473)
T ss_dssp SCEECCGGGCHHHHT------TC-----------------------------------------CEEEEEE-CSSE----
T ss_pred CceecccccCCcccC------CC-----------------------------------------cEEEEEc-cCCE----
Confidence 000000000000000 00 0000000 0000
Q ss_pred CchHHHHHHHHHHhcCCCCCceEeCC--CCCCCCCCCcc--eEEeCCCCCCchhhhhHHHHHHHHHHhhhcCCCCcCCCC
Q psy15270 251 GVFDDTITEMCGELLSGAVPLLVRTP--NGVADTGYNRD--RYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPL 326 (506)
Q Consensus 251 G~~re~~~~~~~~~~~~~~~l~~~~~--n~~~~~g~~~~--~~~~~p~~~~~~~~~~~~~~~G~~~~~a~~~~~~l~~~~ 326 (506)
.-+...+..+|.|+. +..+++|.... .....|........ -++..+++...+.+.+.-
T Consensus 160 -----------s~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~-------~~i~~va~G~~hs~alt~ 221 (473)
T 3of7_A 160 -----------SCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSK-------YNIVQLAPGKDHILFLDE 221 (473)
T ss_dssp -----------EEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCS-------SCEEEEEECSSEEEEEET
T ss_pred -----------EEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCC-------CCEEEEEecCCeEEEEeC
Confidence 000112235777776 44555554221 11122211100000 124566777777777777
Q ss_pred ChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCCCcCcccccccCcceeeecCCCCccccccCCCceeeeeccc
Q psy15270 327 SPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEANFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANR 406 (506)
Q Consensus 327 ~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~~~l~~~g~~~~v~~~n~ 406 (506)
.+.+|.|..+..-.+..-..- ........| ..+.+
T Consensus 222 ~G~v~~wG~n~~GqLG~~~~~--------------------~~~~~~~~p-----------~~~~~-------------- 256 (473)
T 3of7_A 222 EGMVFAWGNGQQNQLGRKVME--------------------RFRLKTLDP-----------RPFGL-------------- 256 (473)
T ss_dssp TSCEEEEECCTTSTTSSCCCG--------------------GGTTTTCSC-----------EECSC--------------
T ss_pred CCeEEEEeCCCCCCCCCCccc--------------------cccccccCc-----------eecCC--------------
Confidence 777777776554433221100 000000000 00000
Q ss_pred hhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCCCCC----cccccEEeeccCCCcEEEEEecCCcceEEEecCCc
Q psy15270 407 LQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTM----NWKVPERVVALNKVHVESVSCGLNHTVCIADKGKA 482 (506)
Q Consensus 407 ~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~~~~----~~~~P~~v~~l~~~~v~~i~~G~~ht~~~~~~~g~ 482 (506)
..++.|+||.+|++||+++|+||+||.|.+||||+++.. ....|..+..+....|++|+||..|+ ++++++|+
T Consensus 257 --~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~~v~~~~~~~i~~ia~G~~hs-~~lt~~G~ 333 (473)
T 3of7_A 257 --RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHS-LILSQDGD 333 (473)
T ss_dssp --CSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEEECCCCTTCCEEEEEECSSEE-EEEETTSC
T ss_pred --cceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeeccccccccCCccEEEEEeCCCeE-EEEeCCCe
Confidence 015679999999999999999999999999999998764 34578888888888999999999997 78899999
Q ss_pred EEEEEcCCCCcccCCCC
Q psy15270 483 VYAFGDGEYGKLGLGNT 499 (506)
Q Consensus 483 vy~wG~n~~GqLG~g~~ 499 (506)
||+||+|.+||||+++.
T Consensus 334 v~~wG~n~~GqLG~~~~ 350 (473)
T 3of7_A 334 LYSCGRLDMFEVGIPKD 350 (473)
T ss_dssp EEEEEECTTCTTCCCGG
T ss_pred EEEEECCCCCccCCCcc
Confidence 99999999999999864
No 11
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=100.00 E-value=1.3e-34 Score=269.39 Aligned_cols=82 Identities=27% Similarity=0.333 Sum_probs=70.2
Q ss_pred CceeeCCCCCCCEEEEEcCCCceEEEecCCCEEEEeCCCCCCCCCCCCCCcCcCEEeccCCCCCEEEEEcCCCceEEEeC
Q psy15270 5 SGRHIPAFKNIHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTA 84 (506)
Q Consensus 5 ~P~~v~~l~~~~i~~va~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~Ia~G~~hs~al~~ 84 (506)
.|..++.++ +|++|+||..|+++|+ ||+||+||.|.+||||+ |. ..+. +|++|+||.+|++||+
T Consensus 16 ~~~p~~~~~--~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~--------p~--~~~~--~i~~ia~G~~hs~~l~- 79 (282)
T 3qhy_B 16 ATVPAEAQS--GVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTM--------PA--ATQS--GVDAIAAGNYHSLALK- 79 (282)
T ss_dssp TCCCGGGSS--SCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSC--------CG--GGGS--CCCEEEECSSEEEEEE-
T ss_pred ccCCccccC--CCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCC--------Cc--cCCC--CEEEEEeCCCEEEEEE-
Confidence 444555554 5999999999999999 99999999999999995 22 2223 7999999999999996
Q ss_pred CCCceecCCCCCCCCCccCCC
Q psy15270 85 PPLPPHTPGHTPSSSLRLGLP 105 (506)
Q Consensus 85 ~G~vy~~WG~~~n~~GqLG~~ 105 (506)
||+|| +||. |.+||||+|
T Consensus 80 ~G~v~-~wG~--n~~Gqlg~P 97 (282)
T 3qhy_B 80 DGEVI-AWGG--NEDGQTTVP 97 (282)
T ss_dssp TTEEE-EEEC--CTTSTTCCC
T ss_pred CCEEE-EeeC--CCCCCCCCC
Confidence 99999 9999 999999965
No 12
>3h1d_A E3 ubiquitin-protein ligase HUWE1; E3ligase, HECT, LOBE, alternative splicing, chromosomal rearrangement, cytoplasm, differentiation; 1.89A {Homo sapiens} PDB: 3g1n_A
Probab=99.98 E-value=9.1e-34 Score=270.56 Aligned_cols=251 Identities=18% Similarity=0.268 Sum_probs=216.0
Q ss_pred CCccHHHHHHHHHhcCCCCCccCCCceEEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEeCCCCCCCCCCCcceE
Q psy15270 210 TVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRY 289 (506)
Q Consensus 210 ~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~f~ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~n~~~~~g~~~~~~ 289 (506)
.|.+++.++++++....+.+++ +.+.|+|.||.|+|+||++||||.+++++++++.++||..+++. +..|
T Consensus 53 rR~~i~eds~~~l~~~~~~~lk---~~l~V~F~gE~G~D~GG~~rEff~ll~~elf~p~~gLF~~~~~~-------~~~~ 122 (405)
T 3h1d_A 53 RRDHVFEDSYRELHRKSPEEMK---NRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGD-------RVTY 122 (405)
T ss_dssp CGGGHHHHHHHHHTTSCTTGGG---SEEEEEETTCCSCCCTTHHHHHHHHHHHHTTCGGGTSEEECSSC-------SSEE
T ss_pred eCchHHHHHHHHHHccCHHHhh---cceEEEECCCCCcCCChhHHHHHHHHHHHHhCCcccceeeccCC-------ceeE
Confidence 7889999999999998899998 78999999999999999999999999999999999999988753 3458
Q ss_pred EeCCCCCCchhhhhHHHHHHHHHHhhhcCCCCcCCCCChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCCCcC
Q psy15270 290 ILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEA 369 (506)
Q Consensus 290 ~~~p~~~~~~~~~~~~~~~G~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~~~~ 369 (506)
++||.+...++++.+|+++|+++|+|++++..++++|++.+||.+++.++++.|++++||.+++++.++++.+..++. .
T Consensus 123 ~~np~s~~~~~~l~~f~flGrliG~Al~~~~~ld~~F~~~f~K~Llg~~~~l~DL~~~Dp~l~~sL~~ll~~~~~~l~-l 201 (405)
T 3h1d_A 123 TINPSSHANPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLG-Y 201 (405)
T ss_dssp EECCC-----CHHHHHHHHHHHHHHHHHHTCCCCCEECHHHHHHHHTCCCCGGGHHHHCHHHHHHHHHHHHSCGGGSS-S
T ss_pred eeCCccccChhHHHHHHHHhHHHHHHHhCCCccCCCccHHHHHHhcCCCCCHHHHHHhhHHHHHHHhhhhcCChhhhc-c
Confidence 899988767889999999999999999999999999999999999999999999999999999999999986543221 1
Q ss_pred cccccccCcceeeecCCCCccccccCCCceeeeeccchhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCCCCCcc
Q psy15270 370 NFPEIIPLECFEGASWTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNW 449 (506)
Q Consensus 370 ~~~~~~~~~~f~~~~~~g~~~~l~~~g~~~~v~~~n~~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~~~~~~ 449 (506)
++......+.|. ....++|+|+|++++||.+|+.+||.+.+.+.+..++ ..+..++.+|+..
T Consensus 202 ~ltF~~~~~~~G----~~~~veL~p~G~~i~VT~~Nk~eYV~l~~~~~l~~~v--------------~~q~~aF~~Gf~~ 263 (405)
T 3h1d_A 202 DLTFSTEVQEFG----VAEVRDLKPNGANILVTEENKKEYVHLVCQMRMTGAI--------------RKQLAAFLEGFYE 263 (405)
T ss_dssp CEEEETTTCCEE----ECCGGGGSSCSSEEECCTTTHHHHHHHHHHHHHTGGG--------------HHHHHHHHHHHHH
T ss_pred eeEEEEEeecCC----ceeeEeecCCCCCCccchHhHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHH
Confidence 122222212221 1357899999999999999999999999999998888 8888899999999
Q ss_pred cccEEeec-cCCCcEEEEEecCCcceEEEecCCcEEEEEcCC
Q psy15270 450 KVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490 (506)
Q Consensus 450 ~~P~~v~~-l~~~~v~~i~~G~~ht~~~~~~~g~vy~wG~n~ 490 (506)
++|..++. |+++|++.+.||.+.+++..++.++.|. |+..
T Consensus 264 Vip~~~L~lF~~~ELe~Li~G~~~id~~dl~~~t~y~-gy~~ 304 (405)
T 3h1d_A 264 IIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYH-KYQS 304 (405)
T ss_dssp HSCHHHHTTSCHHHHHHHHHCCCCCCHHHHHHTEEEE-SSCT
T ss_pred HhhHHHHhCCCHHHHHHHhCCCCCCCHHHHHhhCccc-CCCC
Confidence 99999888 9999999999999999999999999997 6543
No 13
>1zvd_A SMAD ubiquitination regulatory factor 2; ubiquitin ligasecatalytic mechanism,X-RAY ligase; 2.10A {Homo sapiens}
Probab=99.97 E-value=3e-33 Score=266.78 Aligned_cols=246 Identities=22% Similarity=0.291 Sum_probs=216.6
Q ss_pred CCccHHHHHHHHHhcCCCCCccCCCceEEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEeCCCCCCCCCCCcceE
Q psy15270 210 TVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRY 289 (506)
Q Consensus 210 ~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~f~ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~n~~~~~g~~~~~~ 289 (506)
.|.+++.+++++++...+.+++ +.+.|+|.||.|+|+||++||||.+++++++++.++||..++++ ...+
T Consensus 30 ~R~~i~~ds~~~l~~~~~~~lk---~~l~V~F~gE~G~D~GG~~rEff~ll~~el~~p~~gLF~~~~~~-------~~~~ 99 (380)
T 1zvd_A 30 SREEIFEESYRQVMKMRPKDLW---KRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDD-------IYTL 99 (380)
T ss_dssp CSTTHHHHHHHHHHTSCGGGGG---SEEEEEETTCCCSCHHHHHHHHHHHHHHHHTSGGGSSEEEETTE-------EEEE
T ss_pred ccCCHHHHHHHHHHccCHHHhc---CceEEEECCCcCcCCCccHHHHHHHHHHHHcCCcCCCeeccCCC-------Ceee
Confidence 7889999999999999888888 78999999999999999999999999999999999999987642 3345
Q ss_pred EeCCCCCCchhhhhHHHHHHHHHHhhhcCCCCcCCCCChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCCCcC
Q psy15270 290 ILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEA 369 (506)
Q Consensus 290 ~~~p~~~~~~~~~~~~~~~G~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~~~~ 369 (506)
.+||.+..+++++.+|+++|+++|+|++++..++++|++.+||++++.+++++|++++||.+++++.++.+.+..+.
T Consensus 100 ~~np~s~~~~~~l~~f~flG~l~g~al~~~~~ld~~f~~~f~k~llg~~~~l~Dl~~~Dp~l~~sL~~ll~~d~~~~--- 176 (380)
T 1zvd_A 100 QINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWILENDITGV--- 176 (380)
T ss_dssp EECTTGGGSTTHHHHHHHHHHHHHHHHHTTCCCCCCCCHHHHHHHTTCCCCSTTHHHHCHHHHHHHHHHHHSCCTTT---
T ss_pred ccCchhhcChHHHHHHHHhHHHHHHHHhCCceeCCcCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHhCCcccc---
Confidence 78998876778999999999999999999999999999999999999999999999999999999999987653321
Q ss_pred cccccccCcceeee-cCCC--CccccccCCCceeeeeccchhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCCCC
Q psy15270 370 NFPEIIPLECFEGA-SWTG--RITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446 (506)
Q Consensus 370 ~~~~~~~~~~f~~~-~~~g--~~~~l~~~g~~~~v~~~n~~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~~~ 446 (506)
+.. +|+.. ...| ..++|+|+|++++||.+|+.+||.+.+.+.+.+++ ..+..++..|
T Consensus 177 -l~l-----tF~~~~~~~g~~~~veL~p~G~~i~VT~~N~~eYv~l~~~~~l~~~i--------------~~q~~af~~G 236 (380)
T 1zvd_A 177 -LDH-----TFCVEHNAYGEIIQHELKPNGKSIPVNEENKKEYVRLYVNWRFLRGI--------------EAQFLALQKG 236 (380)
T ss_dssp -SCC-----CSEEEEEETTEEEEEESSTTCCCCCCTTTTHHHHHHHHHHHHHTTTT--------------HHHHHHHHHH
T ss_pred -ccc-----eeEEeeecCCcEeEEecCCCCCCCccccccHHHHHHHHHHHHHHHhH--------------HHHHHHHHHh
Confidence 211 23322 1123 56899999999999999999999999999998888 8888899999
Q ss_pred CcccccEEeec-cCCCcEEEEEecCCcceEEEecCCcEEEEEcC
Q psy15270 447 MNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489 (506)
Q Consensus 447 ~~~~~P~~v~~-l~~~~v~~i~~G~~ht~~~~~~~g~vy~wG~n 489 (506)
+..++|..++. |+++|++.+.||.+++++..++.++.|. |+.
T Consensus 237 f~~vip~~~L~~F~~~ELe~li~G~~~id~~dl~~~t~y~-gy~ 279 (380)
T 1zvd_A 237 FNEVIPQHLLKTFDEKELELIICGLGKIDVNDWKVNTRLK-HCT 279 (380)
T ss_dssp HHHHSCGGGGTTCCHHHHHHHHHCBSSCCHHHHHHTEEEE-SSC
T ss_pred HHHHhHHHHHhCCCHHHHHHhhCCCCCCChhhhhhccEec-CCC
Confidence 99999999888 9999999999999999999999999997 553
No 14
>1nd7_A WW domain-containing protein 1; HECT, ubiquitin, ligase, WWP1; 2.10A {Homo sapiens} SCOP: d.148.1.1 PDB: 3tug_A
Probab=99.97 E-value=4.7e-33 Score=265.24 Aligned_cols=244 Identities=21% Similarity=0.253 Sum_probs=215.4
Q ss_pred CCccHHHHHHHHHhcCCCCCccCCCceEEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEeCCCCCCCCCCCcceE
Q psy15270 210 TVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRY 289 (506)
Q Consensus 210 ~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~f~ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~n~~~~~g~~~~~~ 289 (506)
.|.+++.+++++++...+.+++ +.+.|+|.||.|+|+||++||||.+++++++++.++||..+++. +..+
T Consensus 29 ~R~~i~~ds~~~l~~~~~~~l~---~~l~V~F~gE~G~D~GG~~rEff~ll~~el~~p~~~lF~~~~~~-------~~~~ 98 (374)
T 1nd7_A 29 SRQTLFEDSFQQIMALKPYDLR---RRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKN-------NYCL 98 (374)
T ss_dssp CTTTHHHHHHHHHHTSCGGGGG---SEEEEEETTTCCCCCTHHHHHHHHHHHHHHTCGGGSSEEESSSS-------SCCE
T ss_pred CCCCHHHHHHHHHHhcCHHhcc---ceEEEEECCCCCcCCCccHHHHHHHHHHHHcCCccccccccCCC-------Ccee
Confidence 6788999999999999888888 78999999999999999999999999999999999999987643 2346
Q ss_pred EeCCCCCCchhhhhHHHHHHHHHHhhhcCCCCcCCCCChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCCCcC
Q psy15270 290 ILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEA 369 (506)
Q Consensus 290 ~~~p~~~~~~~~~~~~~~~G~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~~~~ 369 (506)
.++|.+..+++++.+|+++|+++|+|++++..++++|++.+||++++.++++.|++++||.+++++.++++.+..+.
T Consensus 99 ~~~p~s~~~~~~l~~f~flG~lig~al~~~~~ld~~f~~~f~k~llg~~~~l~Dl~~~Dp~l~~sL~~l~~~~~~~~--- 175 (374)
T 1nd7_A 99 QINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEEC--- 175 (374)
T ss_dssp EECGGGGGSTTHHHHHHHHHHHHHHHHHTTCCCCCCCCHHHHHHHTTCCCCHHHHHTTCHHHHHHHHHHHSSCSCSS---
T ss_pred ccCCcccCCHHHHHHHHHHHHHHHHHHhcCCeeCCcCCHHHHHHHhCCCCCHHHHHHhhHHHHHhhhhhccCChhhh---
Confidence 78998776788999999999999999999999999999999999999999999999999999999999998654332
Q ss_pred cccccccCcceeee-c--CCCCccccccCCCceeeeeccchhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCCCC
Q psy15270 370 NFPEIIPLECFEGA-S--WTGRITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446 (506)
Q Consensus 370 ~~~~~~~~~~f~~~-~--~~g~~~~l~~~g~~~~v~~~n~~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~~~ 446 (506)
++.. +|... . .....++|+|+|++++||.+|+.+||.+.+.+.+..++ ..+..++..|
T Consensus 176 ~l~l-----~F~~~~~~~G~~~~veL~p~G~~i~VT~~N~~eYv~l~~~~~l~~~i--------------~~q~~af~~G 236 (374)
T 1nd7_A 176 GLEM-----YFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGV--------------QEQTKAFLDG 236 (374)
T ss_dssp CCCC-----BSEECCCSSTTCCCEESSTTGGGCBCCTTTHHHHHHHHHHHHHHTTT--------------HHHHHHHHHH
T ss_pred hcce-----eEEEeeccCCceeeEecCCCCcCceeccccHHHHHHHHHHHHHhccH--------------HHHHHHHHHh
Confidence 1221 23221 1 12357899999999999999999999999999998888 7888899999
Q ss_pred CcccccEEeec-cCCCcEEEEEecCCcceEEEecCCcEEE
Q psy15270 447 MNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYA 485 (506)
Q Consensus 447 ~~~~~P~~v~~-l~~~~v~~i~~G~~ht~~~~~~~g~vy~ 485 (506)
+..++|...+. |+++|++.+.||.+++++..++.++.|.
T Consensus 237 f~~vip~~~L~~F~~~ELe~li~G~~~id~~dl~~~t~y~ 276 (374)
T 1nd7_A 237 FNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYR 276 (374)
T ss_dssp HHHHSCGGGGTTCCHHHHHHHHHCCCCCCHHHHHHTEEEE
T ss_pred hhhhCCHHHHhcCCHHHHHHHhcCCCCCCHHHHhhheEEc
Confidence 99999999988 9999999999999999999999999997
No 15
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-32 Score=265.96 Aligned_cols=246 Identities=20% Similarity=0.262 Sum_probs=208.1
Q ss_pred CCccHHHHHHHHHhcCCCCCccCCCceEEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEeCCCCCCCCCCCcceE
Q psy15270 210 TVKPIFAQISRQVVKMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDRY 289 (506)
Q Consensus 210 ~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~f~ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~n~~~~~g~~~~~~ 289 (506)
.|.+|+.+++++++.....+++ +.++|+|.||.|+|+||++||||.+++++++++.++||..+++. +..+
T Consensus 80 rR~~i~eds~~~l~~~~~~~lk---~~l~V~F~gE~G~D~GG~~rEff~ll~~elf~p~~gLF~~~~~~-------~~~~ 149 (429)
T 3olm_A 80 RRKNIFEDAYQEIMRQTPEDLK---KRLMIKFDGEEGLDYGGVSREFFFLLSHEMFNPFYCLFEYSAYD-------NYTI 149 (429)
T ss_dssp ETTSHHHHHHHHHHHSCHHHHT---SCEEEEEETTC--------CHHHHHHHHHHTCGGGSSEEESSSS-------SCCE
T ss_pred ecchhHHHHHHHHHhcChHhcC---cceEEEECCCCccCCChhHHHHHHHHHHHHcCccCCCceeeCCC-------CeeE
Confidence 7889999999999988888888 78999999999999999999999999999999999999987653 2347
Q ss_pred EeCCCCCCchhhhhHHHHHHHHHHhhhcCCCCcCCCCChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCCCcC
Q psy15270 290 ILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVTEA 369 (506)
Q Consensus 290 ~~~p~~~~~~~~~~~~~~~G~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~~~~ 369 (506)
++||.+...++++.+|+++|+++|+|++++..+++.|++.+||++++.++++.|++++||.+++++.++++.+..+.
T Consensus 150 ~~np~s~~~~~~l~~f~flG~lig~Al~~~~~ld~~f~~~f~k~Llg~~~~l~Dl~~~Dp~l~~sL~~ll~~d~~~~--- 226 (429)
T 3olm_A 150 QINPNSGINPEHLNYFKFIGRVVGLGVFHRRFLDAFFVGALYKMMLRKKVVLQDMEGVDAEVYNSLNWMLENSIDGV--- 226 (429)
T ss_dssp EECGGGGGSTTHHHHHHHHHHHHHHHHHTTCCCCCCBCHHHHHHHTTCCCCHHHHHHHCHHHHHHHHHHTTSCCTTT---
T ss_pred eeCCcccCCHHHHHHHHHHHHHHHHHHhcCCccCCCcCHHHHHhhcCCCCCHHHHHHHhHHHHHHHHHHHhCCHHHh---
Confidence 89998876788999999999999999999999999999999999999999999999999999999999987543322
Q ss_pred cccccccCcceeee-cCCC--CccccccCCCceeeeeccchhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCCCC
Q psy15270 370 NFPEIIPLECFEGA-SWTG--RITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTT 446 (506)
Q Consensus 370 ~~~~~~~~~~f~~~-~~~g--~~~~l~~~g~~~~v~~~n~~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~~~ 446 (506)
+.. +|... ...| ..++|+++|.+++||.+|+.+||.+.+.+.++.++ ..+..++.+|
T Consensus 227 -l~l-----~F~~~~~~~g~~~~veL~p~G~~i~VT~~Nk~eYV~l~~~~~l~~~v--------------~~q~~aF~~G 286 (429)
T 3olm_A 227 -LDL-----TFSADDERFGEVVTVDLKPDGRNIEVTDGNKKEYVELYTQWRIVDRV--------------QEQFKAFMDG 286 (429)
T ss_dssp -CCC-----BSEEEEEETTEEEEEESSTTGGGSBCCTTTHHHHHHHHHHHHHTTTT--------------HHHHHHHHHH
T ss_pred -hcC-----ceEEEeccCCceeeEeccCCCcccccCchhHHHHHHHHHHHHHHHhH--------------HHHHHHHHHH
Confidence 211 23222 1123 46899999999999999999999999999998888 7888889999
Q ss_pred CcccccEEeec-cCCCcEEEEEecCCcceEEEecCCcEEEEEcC
Q psy15270 447 MNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDG 489 (506)
Q Consensus 447 ~~~~~P~~v~~-l~~~~v~~i~~G~~ht~~~~~~~g~vy~wG~n 489 (506)
+..++|..++. |+++|++.+.||...+++..++.++.|. |+.
T Consensus 287 f~~vip~~~L~~F~~~ELe~Li~G~~~id~~dl~~~t~y~-Gy~ 329 (429)
T 3olm_A 287 FNELIPEDLVTVFDERELELLIGGIAEIDIEDWKKHTDYR-GYQ 329 (429)
T ss_dssp HHTTSCHHHHTTSCHHHHHHHHTCBCCCCHHHHHHTEEEE-SCC
T ss_pred hhhcCCHHHHhcCCHHHHHHHhcCCCCCCHHHHHHhcccc-CCC
Confidence 99999999888 9999999999999999999999999996 543
No 16
>1c4z_A E6AP, ubiquitin-protein ligase E3A; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.148.1.1 PDB: 1d5f_A
Probab=99.96 E-value=1.5e-31 Score=253.06 Aligned_cols=247 Identities=19% Similarity=0.263 Sum_probs=210.6
Q ss_pred CCCccHHHHHHHHHh---cCCCCCccCCCceEEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEeCCCCCCCCCCC
Q psy15270 209 QTVKPIFAQISRQVV---KMKGSDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYN 285 (506)
Q Consensus 209 ~~~~~i~~~~~~~~~---~~~~~~l~~~~~~~~v~f~ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~n~~~~~g~~ 285 (506)
+.|.+|+.++++++. ...+.+++ +.++|+|.||.|+|+||++||||.++++++++++++||..+++.
T Consensus 10 V~R~~i~eds~~~l~~~~~~~~~~lk---~~l~V~F~gE~G~D~GG~~rEff~ll~~el~~p~~glF~~~~~~------- 79 (358)
T 1c4z_A 10 VRRDHIIDDALVRLEMIAMENPADLK---KQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDEST------- 79 (358)
T ss_dssp ECSSSHHHHHHHHHHHHHHSCGGGGG---SCCCEEETTCCCCCSSHHHHHHHHHHHHHHTSGGGCSEEEETTT-------
T ss_pred EcCCcHHHHHHHHHHHHhccCHHHhc---CceEEEECCCcCcCCCccHHHHHHHHHHHHcCCcCCceeecCCC-------
Confidence 378899999999874 34677788 68999999999999999999999999999999999999987653
Q ss_pred cceEEeCCCCCCchhhhhHHHHHHHHHHhhhcCCCCcCCCCChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCC
Q psy15270 286 RDRYILNPDLSESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSG 365 (506)
Q Consensus 286 ~~~~~~~p~~~~~~~~~~~~~~~G~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~ 365 (506)
..++++|.+.. +..+|+++|+++|+|++++..++++|++.+||.+++.+++++|++++||.+++++.++++.+. +
T Consensus 80 -~~~~~np~s~~---~~~~f~flG~lig~Al~~~~~ld~~f~~~f~k~llg~~~~l~Dl~~~Dp~l~~sL~~l~~~~~-d 154 (358)
T 1c4z_A 80 -KLFWFNPSSFE---TEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEG-N 154 (358)
T ss_dssp -TEEEECTTCCS---CHHHHHHHHHHHHHHHHTTCCCCCCCCHHHHHHHTTCCCCHHHHHHHSHHHHHHHHHHHHCCS-C
T ss_pred -CeEeeCCcccc---chHHHHhHHHHHHHHHHCCCCcCCcCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHhcCC-c
Confidence 34889998753 346899999999999999999999999999999999999999999999999999999998653 1
Q ss_pred CCcCcccccccCcceeee--cCCC--CccccccCCCceeeeeccchhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcc
Q psy15270 366 VTEANFPEIIPLECFEGA--SWTG--RITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRL 441 (506)
Q Consensus 366 ~~~~~~~~~~~~~~f~~~--~~~g--~~~~l~~~g~~~~v~~~n~~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gql 441 (506)
+ ++.+.. +|... +..| ..++|+|+|++++||.+|+.+||.+.+.+.++.++ ..+..
T Consensus 155 ~-~~~l~l-----tF~~~~~~~~G~~~~~eL~p~G~~i~VT~~N~~eYv~l~~~~~l~~~i--------------~~q~~ 214 (358)
T 1c4z_A 155 V-EDDMMI-----TFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFVNLYSDYILNKSV--------------EKQFK 214 (358)
T ss_dssp H-HHHTCC-----BSEEEECCTTTCCEEEESSTTTTTSBCCTTTHHHHHHHHHHHHHTSTT--------------HHHHH
T ss_pred h-hhhccc-----eEEEeccccCCCeeeeecCCCCcccccccccHHHHHHHHHHHHhcccH--------------HHHHH
Confidence 1 112322 23322 2223 47899999999999999999999999999998888 78888
Q ss_pred cCCCCCcccccEEee-c-cCCCcEEEEEecCCcceEEEecCCcEEEEEcCC
Q psy15270 442 GHGTTMNWKVPERVV-A-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490 (506)
Q Consensus 442 g~~~~~~~~~P~~v~-~-l~~~~v~~i~~G~~ht~~~~~~~g~vy~wG~n~ 490 (506)
++.+|+..++|...+ . |+++|++.+.||.+++++..++.++.|.-|+..
T Consensus 215 af~~Gf~~vip~~~L~~lF~~~ELe~li~G~~~id~~~l~~~t~y~~gy~~ 265 (358)
T 1c4z_A 215 AFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYTR 265 (358)
T ss_dssp HHHHHHHHHHSSSCSCSCSSTHHHHHHHHCBCCCCCTTTSTTCEEESSCCS
T ss_pred HHHHHHHHhcCcchhhcCCCHHHHHHHhhcccCCCHHHHHHHceeCCCCCC
Confidence 899999999997644 3 899999999999999999999999999866554
No 17
>2oni_A E3 ubiquitin-protein ligase NEDD4-like protein; alpha and beta protein (A + B), E3 ligase, HECT domain, UBL- conjugation pathway; HET: MSE; 2.20A {Homo sapiens} PDB: 3jvz_C 3jw0_C 2xbf_A 2xbb_A
Probab=99.96 E-value=4.7e-32 Score=259.22 Aligned_cols=247 Identities=19% Similarity=0.238 Sum_probs=211.7
Q ss_pred CCccHHHHHHHHHhcCCC-CCccCCCceEEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEeCCCCCCCCCCCcce
Q psy15270 210 TVKPIFAQISRQVVKMKG-SDLRLPSRAWKVKLLGEGADDAGGVFDDTITEMCGELLSGAVPLLVRTPNGVADTGYNRDR 288 (506)
Q Consensus 210 ~~~~i~~~~~~~~~~~~~-~~l~~~~~~~~v~f~ge~g~d~gG~~re~~~~~~~~~~~~~~~l~~~~~n~~~~~g~~~~~ 288 (506)
.|.+++.++++++..... +.++ +.+.|+|.||.|+|+||++||||.+++++++++.++||..+++. +..
T Consensus 48 ~R~~i~eds~~~l~~~~~~~~lk---~~l~V~F~gE~G~D~GG~~rEff~ll~~el~~p~~gLF~~~~~~-------~~~ 117 (392)
T 2oni_A 48 HRNNIFEESYRRIMSVKRPDVLK---ARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATD-------NYT 117 (392)
T ss_dssp CGGGHHHHHHHHHHHCSCGGGGG---SEEEEEEC-CCSSCHHHHHHHHHHHHHHHHTCGGGSSEEESSTT-------CCC
T ss_pred cCCchHHHHHHHHHccCcHHhhC---ccEEEEECCCccccCCccHHHHHHHHHHHHcCcccCCceecCCC-------Cce
Confidence 688999999999998754 3456 67889999999999999999999999999999999999987643 234
Q ss_pred EEeCCCCC-CchhhhhHHHHHHHHHHhhhcCCCCcCCCCChhhhhhhcccCCCcCccccchHHHHHHHHHHHhcccCCCC
Q psy15270 289 YILNPDLS-ESLQSLMHFKFLGILFGVAIRTKKPLPLPLSPLVWKLIVQEPVTFTDLEDNDTLYAQSLRAIRDIHLSGVT 367 (506)
Q Consensus 289 ~~~~p~~~-~~~~~~~~~~~~G~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~l~~~~~~~~~~~~ 367 (506)
++++|.+. ++++++.+|+++|+++|+|++++..++++|+..+||++++.++++.|++++||.+++++.++++.+..
T Consensus 118 ~~~np~s~~~~~~~l~~f~flG~lig~Al~~~~~ld~~f~~~f~K~llg~~~~l~Dl~~~Dp~l~~sL~~l~~~d~~--- 194 (392)
T 2oni_A 118 LQINPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWILENDPT--- 194 (392)
T ss_dssp EEECTTHHHHCTTHHHHHHHHHHHHHHHHHHTCCCSSCBCHHHHHHHTTCCCCTHHHHTTCHHHHHHHHHHHHSCCG---
T ss_pred eccCCccccccHHHHHHHHhcchhhhhhhcCCcccCccchHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHhcCChh---
Confidence 67888764 34678999999999999999999999999999999999999999999999999999999999986432
Q ss_pred cCcccccccCcceeee-cCCC--CccccccCCCceeeeeccchhhhhhhhhcccceeEEEeeCCcEEEEecCCCCcccCC
Q psy15270 368 EANFPEIIPLECFEGA-SWTG--RITPIVTGGQSVPLTFANRLQYYEAAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHG 444 (506)
Q Consensus 368 ~~~~~~~~~~~~f~~~-~~~g--~~~~l~~~g~~~~v~~~n~~~~v~~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~ 444 (506)
++.. +|+.. ..-| ..++|+|+|++++||.+|+.+||.+.+.+.+..++ ..+..++.
T Consensus 195 --~l~L-----~F~v~~~~~G~~~~veL~p~G~~i~VT~~N~~eYv~l~~~~~l~~~i--------------~~q~~af~ 253 (392)
T 2oni_A 195 --ELDL-----MFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYIDLVIQWRFVNRV--------------QKQMNAFL 253 (392)
T ss_dssp --GGCC-----BSEEEEEETTEEEEEESSTTGGGCBCCTTTHHHHHHHHHHHHHTTTS--------------HHHHHHHH
T ss_pred --Hcee-----eEEEeeecCCceeEEecCCCCccCccchhhHHHHHHHHHHHHHhhhH--------------HHHHHHHH
Confidence 2221 23321 1123 47899999999999999999999999999998888 78888899
Q ss_pred CCCcccccEEeec-cCCCcEEEEEecCCcceEEEecCCcEEEEEcCC
Q psy15270 445 TTMNWKVPERVVA-LNKVHVESVSCGLNHTVCIADKGKAVYAFGDGE 490 (506)
Q Consensus 445 ~~~~~~~P~~v~~-l~~~~v~~i~~G~~ht~~~~~~~g~vy~wG~n~ 490 (506)
.|+..++|..++. |+++|++.+.||.+.+++..++.++.|.-|+..
T Consensus 254 ~Gf~~vip~~~L~~F~~~ELe~licG~~~id~~dl~~~t~y~~gy~~ 300 (392)
T 2oni_A 254 EGFTELLPIDLIKIFDENELELLMCGLGDVDVNDWRQHSIYKNGYCP 300 (392)
T ss_dssp HHHHHHSCHHHHTTSCHHHHHHHHHCCCCCCHHHHHHTCEEETTCCT
T ss_pred HHHHHhccHHhhhcCCHHHHHHhhcCCCCCCHHHHhcceEECCCCCC
Confidence 9999999999888 999999999999999999999999999865543
No 18
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=99.95 E-value=3.5e-28 Score=225.90 Aligned_cols=74 Identities=28% Similarity=0.381 Sum_probs=67.0
Q ss_pred CCEEEEEcCCCceEEEecCCCEEEEeCCCCCCCCCCCCCCcCcCEEeccCCCCCEEEEEcCCCceEEEeCCCCceecCCC
Q psy15270 15 IHIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGH 94 (506)
Q Consensus 15 ~~i~~va~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~Ia~G~~hs~al~~~G~vy~~WG~ 94 (506)
.+|++|+||..|+++|+ ||+||+||.|.+||||+ |.++. .+|++|+||.+|++||+ +|+|| +||.
T Consensus 63 ~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~--------P~~~~----~~v~~ia~G~~hs~al~-~G~v~-~wG~ 127 (282)
T 3qhy_B 63 SGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTV--------PAEAR----SGVDAIAAGAWASYALK-DGKVI-AWGD 127 (282)
T ss_dssp SCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCC--------CGGGS----SSEEEEEEETTEEEEEE-TTEEE-EEEC
T ss_pred CCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCC--------CcccC----CCeEEEECcCCEEEEEe-CCeEE-EecC
Confidence 47999999999999997 99999999999999995 44332 27999999999999999 99999 9999
Q ss_pred CCCCCCccCCC
Q psy15270 95 TPSSSLRLGLP 105 (506)
Q Consensus 95 ~~n~~GqLG~~ 105 (506)
|.+||||.+
T Consensus 128 --n~~gqlg~~ 136 (282)
T 3qhy_B 128 --DSDGQTTVP 136 (282)
T ss_dssp --CTTSTTSCC
T ss_pred --CCCCcCCCC
Confidence 999999954
No 19
>4gbf_A Phikz131; 7-bladed beta-propeller, possibly participates in binding of phage to the HOST cell, viral protein; 1.95A {Pseudomonas phage phikz}
Probab=96.71 E-value=0.0012 Score=56.90 Aligned_cols=65 Identities=20% Similarity=0.204 Sum_probs=55.7
Q ss_pred CEEEEEcCCCceEEEecCCCEEEEeCCCCCCCCCCCCCCcCcCEEeccCCCCCEEEEEcCCCceEEEeCCCCceecCCC
Q psy15270 16 HIVDISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGRSHSAAWTAPPLPPHTPGH 94 (506)
Q Consensus 16 ~i~~va~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~Ia~G~~hs~al~~~G~vy~~WG~ 94 (506)
.|.+||--..|+.++--|+++|+||+|++||+-+..+ .+ +..+++||.++|+-+..-..|. -||.
T Consensus 310 ~i~~VsG~y~H~vvi~gd~el~sFG~~sNGQ~~ip~t------------ag-Pfla~~AG~~fTVTVn~~nyv~-FWGD 374 (400)
T 4gbf_A 310 PIGGVSGLYTHYTVMYGDGQIAFFGNNDNGQCDVDDH------------AG-PYIQLAAGHNFTVTVNTLNQVM-FWGD 374 (400)
T ss_dssp CCCCCBCSSSEEEC-CTTTCCCEEECCTTSTTCCCGG------------GC-CEEEEEECSSEEEEEETTCCEE-EEEC
T ss_pred ccccccccccceEEEecCceeEEeccCCCCceecCCC------------cc-hHHhHhccCCeEEEEeceeeEE-EecC
Confidence 4667777779999999999999999999999754433 22 7999999999999999999999 9998
No 20
>4gbf_A Phikz131; 7-bladed beta-propeller, possibly participates in binding of phage to the HOST cell, viral protein; 1.95A {Pseudomonas phage phikz}
Probab=90.72 E-value=0.77 Score=39.76 Aligned_cols=69 Identities=22% Similarity=0.330 Sum_probs=53.8
Q ss_pred hhhhcccceeEEEeeCCcEEEEecCCCCcccCCCCCcccccEEeeccCCCcEEEEEecCCcceEEEecCCcEEEEEcCCC
Q psy15270 412 AAIACGFKHSAVVTSNGYLYTFGNGDYGRLGHGTTMNWKVPERVVALNKVHVESVSCGLNHTVCIADKGKAVYAFGDGEY 491 (506)
Q Consensus 412 ~~i~~g~~hs~alt~~G~v~~wG~n~~gqlg~~~~~~~~~P~~v~~l~~~~v~~i~~G~~ht~~~~~~~g~vy~wG~n~~ 491 (506)
-.|+--+.|...+--|++++++|+|+.||+-..+... ...++.+|..+| +-+..-..+-=||..-.
T Consensus 312 ~~VsG~y~H~vvi~gd~el~sFG~~sNGQ~~ip~tag-------------Pfla~~AG~~fT-VTVn~~nyv~FWGDSPD 377 (400)
T 4gbf_A 312 GGVSGLYTHYTVMYGDGQIAFFGNNDNGQCDVDDHAG-------------PYIQLAAGHNFT-VTVNTLNQVMFWGDSPD 377 (400)
T ss_dssp CCCBCSSSEEEC-CTTTCCCEEECCTTSTTCCCGGGC-------------CEEEEEECSSEE-EEEETTCCEEEEECCTT
T ss_pred ccccccccceEEEecCceeEEeccCCCCceecCCCcc-------------hHHhHhccCCeE-EEEeceeeEEEecCCCC
Confidence 4567678899999999999999999999997654322 367899999998 66666678999997665
Q ss_pred Ccc
Q psy15270 492 GKL 494 (506)
Q Consensus 492 GqL 494 (506)
..|
T Consensus 378 NSL 380 (400)
T 4gbf_A 378 NSL 380 (400)
T ss_dssp STT
T ss_pred cce
Confidence 554
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=37.57 E-value=52 Score=33.54 Aligned_cols=72 Identities=13% Similarity=0.071 Sum_probs=41.9
Q ss_pred CceEEEecCCCEEEEeCCCCCCCCCCCCCCcCcCEEeccCCCCCEEEEE----cCCCceEEE-eCCCCceecCCCCCCCC
Q psy15270 25 EHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVS----AGRSHSAAW-TAPPLPPHTPGHTPSSS 99 (506)
Q Consensus 25 ~Ht~al~~~G~vy~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~Ia----~G~~hs~al-~~~G~vy~~WG~~~n~~ 99 (506)
.|++++-.+|+||..|-...++ +.+.......+.......+ +...++ .-..|++|+ ..+|+|| +.|. +.+
T Consensus 458 ~~~~~~l~~g~i~v~GG~~~~~-~~~~~~~~~~v~~ydp~t~-~W~~~~~~~~~R~~hs~a~ll~dg~v~-v~GG--~~~ 532 (656)
T 1k3i_A 458 FHTSVVLPDGSTFITGGQRRGI-PFEDSTPVFTPEIYVPEQD-TFYKQNPNSIVRVYHSISLLLPDGRVF-NGGG--GLC 532 (656)
T ss_dssp SCEEEECTTSCEEEECCBSBCC-TTCCCSBCCCCEEEEGGGT-EEEECCCCSSCCCTTEEEEECTTSCEE-EEEC--CCC
T ss_pred cCCeEECCCCCEEEECCcccCc-CcCCCCcccceEEEcCCCC-ceeecCCCCCccccccHhhcCCCcEEE-ecCC--CCC
Confidence 6887888899999999655443 1111111223333222111 333332 235787664 5899999 9999 766
Q ss_pred Cc
Q psy15270 100 LR 101 (506)
Q Consensus 100 Gq 101 (506)
|.
T Consensus 533 ~~ 534 (656)
T 1k3i_A 533 GD 534 (656)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 22
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=20.59 E-value=1.4e+02 Score=26.26 Aligned_cols=73 Identities=12% Similarity=0.000 Sum_probs=41.4
Q ss_pred EEEcCCCceEEEecCCCEEEEeCCCCCCCCCCCCCCcCcCEEeccCCCCCEEEEEcCC-CceEEEeCCCCceecCCC
Q psy15270 19 DISVGTEHVLAVSNTGQVFAWGNNSDAQLGLGNQINYREPQLVLALSNKNIRQVSAGR-SHSAAWTAPPLPPHTPGH 94 (506)
Q Consensus 19 ~va~G~~Ht~al~~~G~vy~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~Ia~G~-~hs~al~~~G~vy~~WG~ 94 (506)
++..+.-..++++.||+.++++....+.+...... ...+....... ..|..++.-. ..-++...+|.|. .|=.
T Consensus 6 ~~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~dg~i~-iw~~ 79 (337)
T 1gxr_A 6 AMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPR-HARQINTLNHG-EVVCAVTISNPTRHVYTGGKGCVK-VWDI 79 (337)
T ss_dssp EEEEEECCEEEECSSSCEEECCCCTTSSSSTTCCS-EEEEEEEECCS-SCCCEEEECSSSSEEEEECBSEEE-EEET
T ss_pred cccCCceeEEEECCCCCEEEeecCCCcEeccccCC-ccccceeccCC-CceEEEEEecCCcEEEEcCCCeEE-EEEC
Confidence 34556678899999999999987655433322111 11222222222 2455555432 3345555588888 8865
Done!