Query psy15272
Match_columns 121
No_of_seqs 116 out of 1946
Neff 11.5
Searched_HMMs 29240
Date Fri Aug 16 16:50:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15272.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15272hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 2.3E-28 7.7E-33 140.8 13.7 109 5-114 36-146 (169)
2 4gpm_A Engineered protein OR26 100.0 4.2E-28 1.4E-32 139.6 13.7 107 8-115 6-114 (169)
3 2jab_A H10-2-G3; HER2, darpin, 99.9 1.4E-26 4.9E-31 128.8 13.4 110 5-115 13-124 (136)
4 3aaa_C Myotrophin, protein V-1 99.9 7.6E-27 2.6E-31 127.9 11.6 110 4-114 5-116 (123)
5 1d9s_A Cyclin-dependent kinase 99.9 7.5E-27 2.6E-31 130.0 10.1 112 2-115 8-122 (136)
6 1awc_B Protein (GA binding pro 99.9 6.2E-26 2.1E-30 128.4 13.0 111 3-114 31-143 (153)
7 3twr_A Tankyrase-2; ankyrin re 99.9 3E-26 1E-30 131.1 11.6 112 3-114 5-118 (165)
8 3deo_A Signal recognition part 99.9 8.6E-26 3E-30 131.3 12.9 109 5-115 43-154 (183)
9 3c5r_A BARD-1, BRCA1-associate 99.9 5.2E-26 1.8E-30 126.7 11.2 112 2-114 6-119 (137)
10 3f6q_A Integrin-linked protein 99.9 2E-25 6.7E-30 129.3 12.4 108 7-114 6-115 (179)
11 3v30_A DNA-binding protein rfx 99.9 3.2E-25 1.1E-29 127.5 13.2 111 3-114 33-145 (172)
12 3v31_A Ankyrin repeat family A 99.9 5.2E-25 1.8E-29 126.1 13.3 110 4-114 34-145 (167)
13 4b93_B Ankyrin repeat domain-c 99.9 7.7E-26 2.6E-30 138.6 10.5 109 5-114 118-228 (269)
14 2y1l_E Darpin-8.4; hydrolase-i 99.9 7E-25 2.4E-29 126.0 13.7 107 7-114 15-123 (169)
15 2y1l_E Darpin-8.4; hydrolase-i 99.9 7.6E-25 2.6E-29 125.8 13.6 112 3-115 44-157 (169)
16 1bd8_A P19INK4D CDK4/6 inhibit 99.9 3.9E-25 1.3E-29 125.3 12.3 106 8-114 4-111 (156)
17 1bi7_B P16INK4A, MTS1, multipl 99.9 8.6E-26 2.9E-30 128.3 9.3 109 4-114 10-121 (156)
18 2rfm_A Putative ankyrin repeat 99.9 5.2E-25 1.8E-29 128.7 12.7 110 4-114 66-177 (192)
19 3ui2_A Signal recognition part 99.9 3.7E-25 1.3E-29 133.8 12.3 108 5-114 44-154 (244)
20 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1E-24 3.6E-29 119.4 13.0 108 6-114 2-111 (126)
21 3v31_A Ankyrin repeat family A 99.9 4.8E-25 1.6E-29 126.3 12.1 109 6-115 3-113 (167)
22 3v30_A DNA-binding protein rfx 99.9 2.9E-25 9.9E-30 127.7 10.7 108 7-114 3-112 (172)
23 2rfm_A Putative ankyrin repeat 99.9 5.5E-25 1.9E-29 128.6 12.0 113 2-115 31-145 (192)
24 3twr_A Tankyrase-2; ankyrin re 99.9 8.4E-25 2.9E-29 125.1 11.2 108 5-113 41-150 (165)
25 4b93_B Ankyrin repeat domain-c 99.9 7.5E-25 2.6E-29 134.2 11.6 111 3-114 83-195 (269)
26 1yyh_A HN1;, notch 1, ankyrin 99.9 1.5E-24 5.2E-29 131.6 12.7 110 4-114 122-233 (253)
27 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.7E-24 5.9E-29 122.7 12.0 110 3-115 33-144 (156)
28 3f6q_A Integrin-linked protein 99.9 1.4E-24 4.7E-29 125.7 11.6 111 3-114 36-148 (179)
29 3aji_A 26S proteasome non-ATPa 99.9 1.6E-24 5.6E-29 129.5 12.4 113 2-114 2-116 (231)
30 1awc_B Protein (GA binding pro 99.9 3.7E-24 1.2E-28 121.1 13.0 107 7-115 3-111 (153)
31 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.5E-24 5.1E-29 123.6 11.1 107 6-114 38-147 (162)
32 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.7E-24 5.9E-29 123.3 11.2 108 6-115 5-114 (162)
33 3ehr_A Osteoclast-stimulating 99.9 6.4E-25 2.2E-29 130.9 9.6 108 6-114 73-183 (222)
34 3t8k_A Uncharacterized protein 99.9 6.7E-25 2.3E-29 128.0 9.4 111 5-115 37-165 (186)
35 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3E-24 1E-28 129.4 12.5 106 5-111 36-144 (239)
36 2vge_A RELA-associated inhibit 99.9 1.5E-24 5E-29 130.2 10.5 110 4-114 19-133 (229)
37 2rfa_A Transient receptor pote 99.9 4.8E-24 1.6E-28 127.7 12.7 110 4-114 35-164 (232)
38 3hra_A Ankyrin repeat family p 99.9 6.6E-24 2.3E-28 124.6 12.9 109 6-114 72-188 (201)
39 3utm_A Tankyrase-1; tankyrase, 99.9 3.1E-24 1.1E-28 134.7 12.0 110 5-114 23-134 (351)
40 2rfa_A Transient receptor pote 99.9 4.5E-24 1.5E-28 127.8 12.0 111 5-115 2-132 (232)
41 1yyh_A HN1;, notch 1, ankyrin 99.9 7.5E-24 2.6E-28 128.5 12.5 109 6-114 90-200 (253)
42 3lvq_E ARF-GAP with SH3 domain 99.9 8.3E-24 2.8E-28 139.0 13.6 108 6-114 132-250 (497)
43 3hra_A Ankyrin repeat family p 99.9 8.7E-24 3E-28 124.1 12.3 107 7-114 40-150 (201)
44 2f8y_A Notch homolog 1, transl 99.9 1.8E-23 6.2E-28 124.4 13.8 109 5-114 91-201 (223)
45 2xai_A ASB-9, ankyrin repeat a 99.9 1.5E-23 5E-28 127.8 13.3 111 3-114 33-144 (261)
46 2etb_A Transient receptor pote 99.9 3.1E-24 1.1E-28 130.2 10.2 111 4-115 88-232 (256)
47 2b0o_E UPLC1; arfgap, structur 99.9 1.2E-23 4E-28 130.8 13.0 108 6-114 151-269 (301)
48 2f8y_A Notch homolog 1, transl 99.9 2.1E-23 7.2E-28 124.1 13.5 108 7-114 59-168 (223)
49 3jxi_A Vanilloid receptor-rela 99.9 2.6E-24 8.8E-29 130.8 9.7 109 5-114 92-235 (260)
50 1dcq_A PYK2-associated protein 99.9 1.6E-23 5.6E-28 128.8 13.3 107 7-114 131-248 (278)
51 3aji_A 26S proteasome non-ATPa 99.9 3.7E-23 1.3E-27 123.7 13.7 84 30-113 96-181 (231)
52 4hbd_A KN motif and ankyrin re 99.9 2.9E-23 9.9E-28 127.5 13.5 112 2-114 107-260 (276)
53 2dzn_A Probable 26S proteasome 99.9 3.2E-23 1.1E-27 123.7 13.3 110 4-114 70-184 (228)
54 3ljn_A Hypothetical protein; a 99.9 5.4E-24 1.9E-28 134.8 10.5 110 4-114 136-254 (364)
55 1oy3_D Transcription factor in 99.9 1.3E-23 4.5E-28 128.6 11.8 112 3-115 155-269 (282)
56 1s70_B 130 kDa myosin-binding 99.9 2.7E-23 9.1E-28 128.4 13.1 110 4-114 71-242 (299)
57 3b7b_A Euchromatic histone-lys 99.9 2.4E-23 8.3E-28 124.9 12.5 109 5-114 110-220 (237)
58 3jue_A Arfgap with coiled-coil 99.9 2E-23 6.9E-28 132.6 12.7 108 6-114 199-311 (368)
59 1s70_B 130 kDa myosin-binding 99.9 1.4E-23 4.8E-28 129.6 11.5 109 5-114 39-149 (299)
60 2pnn_A Transient receptor pote 99.9 9.5E-24 3.2E-28 129.2 10.5 110 4-114 99-243 (273)
61 1oy3_D Transcription factor in 99.9 1.9E-23 6.6E-28 127.9 11.7 83 33-115 151-236 (282)
62 1k1a_A B-cell lymphoma 3-encod 99.9 8.4E-24 2.9E-28 127.0 9.5 109 6-114 79-193 (241)
63 2etb_A Transient receptor pote 99.9 5.5E-24 1.9E-28 129.1 8.7 111 5-115 1-147 (256)
64 1ikn_D Protein (I-kappa-B-alph 99.9 1.4E-23 5E-28 126.0 10.2 109 5-114 44-161 (236)
65 1n11_A Ankyrin; clathrin, BAND 99.9 3.5E-23 1.2E-27 133.7 12.7 110 4-114 276-387 (437)
66 3b7b_A Euchromatic histone-lys 99.9 7.7E-23 2.6E-27 122.7 13.1 110 5-114 76-187 (237)
67 2xai_A ASB-9, ankyrin repeat a 99.9 2.7E-23 9.3E-28 126.6 11.2 109 5-114 100-209 (261)
68 3d9h_A CDNA FLJ77766, highly s 99.9 7.1E-23 2.4E-27 126.3 13.0 108 6-114 92-200 (285)
69 1k1a_A B-cell lymphoma 3-encod 99.9 1.3E-22 4.3E-27 121.9 13.0 112 3-114 6-126 (241)
70 2dzn_A Probable 26S proteasome 99.9 3.9E-23 1.3E-27 123.3 10.6 111 3-114 104-218 (228)
71 3jxi_A Vanilloid receptor-rela 99.9 7.3E-23 2.5E-27 124.4 11.9 111 4-114 44-186 (260)
72 3kea_A K1L; tropism, ANK repea 99.9 2E-23 6.8E-28 128.7 9.1 109 3-114 28-139 (285)
73 2pnn_A Transient receptor pote 99.9 2E-22 6.9E-27 123.3 13.3 111 3-114 51-194 (273)
74 1ikn_D Protein (I-kappa-B-alph 99.9 3.7E-23 1.3E-27 124.2 9.9 111 3-114 75-194 (236)
75 1n11_A Ankyrin; clathrin, BAND 99.9 9.9E-23 3.4E-27 131.6 12.4 110 4-114 12-123 (437)
76 2l6b_A NR1C; ankyrin, consensu 99.9 2.1E-23 7.1E-28 112.9 7.8 106 2-108 5-112 (115)
77 3d9h_A CDNA FLJ77766, highly s 99.9 2.4E-22 8.4E-27 123.8 13.2 111 3-115 56-168 (285)
78 1wdy_A 2-5A-dependent ribonucl 99.9 3.7E-22 1.3E-26 122.1 13.6 112 3-114 145-263 (285)
79 1wdy_A 2-5A-dependent ribonucl 99.9 2.9E-22 9.9E-27 122.6 13.1 109 6-115 5-116 (285)
80 1n0q_A 3ANK, 3 ankyrin repeats 99.9 4.3E-22 1.5E-26 104.1 11.4 90 6-96 2-93 (93)
81 3kea_A K1L; tropism, ANK repea 99.9 4.2E-23 1.4E-27 127.3 7.9 110 4-114 93-205 (285)
82 3eu9_A Huntingtin-interacting 99.9 8.3E-22 2.8E-26 118.0 12.8 110 4-114 7-119 (240)
83 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.3E-22 7.7E-27 105.1 9.1 77 39-115 1-79 (93)
84 2fo1_E LIN-12 protein; beta-ba 99.9 4.1E-22 1.4E-26 126.9 12.0 112 3-114 232-356 (373)
85 1ycs_B 53BP2, P53BP2; ankyrin 99.9 7.4E-23 2.5E-27 123.3 7.9 108 5-114 4-113 (239)
86 1sw6_A Regulatory protein SWI6 99.9 5E-23 1.7E-27 129.1 7.0 112 2-114 127-326 (327)
87 3ljn_A Hypothetical protein; a 99.9 2E-22 7E-27 127.6 9.8 111 4-115 18-149 (364)
88 3t8k_A Uncharacterized protein 99.9 1.2E-22 3.9E-27 118.6 7.6 104 8-114 8-125 (186)
89 3utm_A Tankyrase-1; tankyrase, 99.9 1.5E-21 5.1E-26 122.5 13.1 110 4-113 209-322 (351)
90 4g8k_A 2-5A-dependent ribonucl 99.9 3.8E-21 1.3E-25 120.7 13.0 110 5-114 167-283 (337)
91 1sw6_A Regulatory protein SWI6 99.9 4.2E-22 1.5E-26 124.9 7.9 102 12-113 102-210 (327)
92 1bi7_B P16INK4A, MTS1, multipl 99.9 5.7E-22 2E-26 112.5 7.0 107 3-111 42-151 (156)
93 2b0o_E UPLC1; arfgap, structur 99.9 6E-22 2E-26 123.1 7.1 105 3-114 187-296 (301)
94 3c5r_A BARD-1, BRCA1-associate 99.9 3E-21 1E-25 107.3 9.2 84 30-114 1-86 (137)
95 2fo1_E LIN-12 protein; beta-ba 99.9 1.2E-21 4.2E-26 124.7 8.3 112 4-115 123-246 (373)
96 3eu9_A Huntingtin-interacting 99.9 5.1E-20 1.7E-24 110.2 14.6 110 4-114 40-152 (240)
97 2zgd_A 3 repeat synthetic anky 99.9 6.7E-21 2.3E-25 102.4 8.7 83 33-115 17-101 (110)
98 4g8k_A 2-5A-dependent ribonucl 99.8 3.6E-20 1.2E-24 116.3 13.0 108 6-114 25-135 (337)
99 1d9s_A Cyclin-dependent kinase 99.8 6.3E-21 2.1E-25 105.9 7.3 85 30-115 2-89 (136)
100 2vge_A RELA-associated inhibit 99.8 1.4E-21 4.7E-26 117.3 3.6 95 3-98 51-150 (229)
101 2l6b_A NR1C; ankyrin, consensu 99.8 2E-20 6.8E-25 101.1 6.7 81 35-115 4-86 (115)
102 2jab_A H10-2-G3; HER2, darpin, 99.8 3.2E-19 1.1E-23 99.0 11.6 91 3-94 44-136 (136)
103 3aaa_C Myotrophin, protein V-1 99.8 9.9E-20 3.4E-24 99.5 9.0 79 37-115 4-84 (123)
104 4hbd_A KN motif and ankyrin re 99.8 1.5E-20 5.1E-25 115.5 6.3 104 11-115 81-227 (276)
105 1n0r_A 4ANK, 4 ankyrin repeats 99.8 7.7E-19 2.6E-23 95.8 11.8 93 3-96 32-126 (126)
106 3lvq_E ARF-GAP with SH3 domain 99.8 1.5E-19 5.2E-24 118.8 10.5 104 3-107 168-276 (497)
107 2aja_A Ankyrin repeat family p 99.8 2.2E-21 7.5E-26 123.6 1.1 107 6-114 92-209 (376)
108 2zgd_A 3 repeat synthetic anky 99.8 1.6E-18 5.4E-23 93.1 11.3 86 4-90 22-109 (110)
109 1dcq_A PYK2-associated protein 99.8 5.5E-19 1.9E-23 108.7 10.1 94 3-97 166-264 (278)
110 3jue_A Arfgap with coiled-coil 99.8 3.7E-18 1.3E-22 108.6 10.4 110 4-114 233-347 (368)
111 3ehr_A Osteoclast-stimulating 99.8 4.4E-19 1.5E-23 105.7 5.7 103 3-105 103-207 (222)
112 3deo_A Signal recognition part 99.8 1E-18 3.5E-23 101.4 6.8 78 37-115 41-121 (183)
113 3ui2_A Signal recognition part 99.7 2.1E-18 7.2E-23 104.2 6.0 77 37-114 42-121 (244)
114 2aja_A Ankyrin repeat family p 99.7 7E-19 2.4E-23 112.2 0.6 100 6-114 128-235 (376)
115 1gp8_A Protein (scaffolding pr 50.7 14 0.00049 15.4 2.7 18 8-25 15-32 (40)
116 3zrh_A Ubiquitin thioesterase 38.7 87 0.003 21.0 5.5 48 14-62 30-91 (454)
117 3mkq_B Coatomer subunit alpha; 27.1 94 0.0032 17.8 5.2 71 11-92 68-139 (177)
118 3spa_A Mtrpol, DNA-directed RN 20.2 2.3E+02 0.008 21.8 5.0 86 12-99 136-236 (1134)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=2.3e-28 Score=140.77 Aligned_cols=109 Identities=36% Similarity=0.491 Sum_probs=63.3
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFG 82 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~ 82 (121)
.+.++++.|+..++.+.+.. +.+.|.+++.+|..|+||||+|+..|+.+++++|++.|++++. ..|+||||+|+..|
T Consensus 36 ~g~t~l~~a~~~~~~~~~~~-ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g 114 (169)
T 4gpm_A 36 DGRTPLHHAAENGHKEVVKL-LISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG 114 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHH-HHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 34445555555555533332 2334555555555666666666666666666666666665542 33566666666666
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+.+++++|++.|++++.+|..|.|||++|++.
T Consensus 115 ~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~ 146 (169)
T 4gpm_A 115 HKEVVKLLISKGADVNTSDSDGRTPLDLAREH 146 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 66666666666666666666666666666655
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=4.2e-28 Score=139.63 Aligned_cols=107 Identities=37% Similarity=0.569 Sum_probs=98.8
Q ss_pred HHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCHH
Q psy15272 8 RQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRPS 85 (121)
Q Consensus 8 ~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~~ 85 (121)
+.|+.|+..|+.+.|+.|| +.|++++.+|..|+||+|+|+..+..++++.|++.|++++. ..|+||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll-~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence 4689999999997776655 56999999999999999999999999999999999998874 45899999999999999
Q ss_pred HHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 86 VAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 86 ~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
++++|++.|++++.+|..|.||||+|++.+
T Consensus 85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g 114 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDSDGRTPLHHAAENG 114 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 999999999999999999999999999983
No 3
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=1.4e-26 Score=128.84 Aligned_cols=110 Identities=36% Similarity=0.484 Sum_probs=100.0
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFG 82 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~ 82 (121)
.+.++++.|+..|+.+.+..++ +.+.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILM-ANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred cccHHHHHHHHhCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 4577899999999997776655 55899999999999999999999999999999999998874 45899999999999
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
+.+++++|++.|++++.+|..|.||+++|+..+
T Consensus 92 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~ 124 (136)
T 2jab_A 92 HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNG 124 (136)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCC
Confidence 999999999999999999999999999999883
No 4
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.95 E-value=7.6e-27 Score=127.93 Aligned_cols=110 Identities=26% Similarity=0.433 Sum_probs=99.0
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHh
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACF 81 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~ 81 (121)
..+.++++.|+..|+.+.+..++ +.+.+++..|..|+||||+|+..++.+++++|++.|++++. ..|.||||+|+..
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHH-HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 46788999999999997776655 56889999999999999999999999999999999998874 4589999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 82 GRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 82 ~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
++.+++++|++.|++++.+|..|.||+++|...
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 999999999999999999999999999998655
No 5
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=7.5e-27 Score=130.00 Aligned_cols=112 Identities=23% Similarity=0.280 Sum_probs=101.1
Q ss_pred CCCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCC--CCC-CccHHHHH
Q psy15272 2 QTCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN--KGQ-RSSSLHYA 78 (121)
Q Consensus 2 ~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~--~~~-g~t~l~~a 78 (121)
.+..+.++++.|+..++.+.+..++ +.+.+++..|..|.||||+|+. ++.+++++|++.|++++ +.. |.||||+|
T Consensus 8 ~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 85 (136)
T 1d9s_A 8 LGGSSDAGLATAAARGQVETVRQLL-EAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDA 85 (136)
T ss_dssp CCCCCSCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHH
T ss_pred CCCCCccHHHHHHHcCCHHHHHHHH-HcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHH
Confidence 3456788999999999997776655 5589999999999999999999 99999999999999887 345 89999999
Q ss_pred HHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 79 ACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 79 ~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
+..++.+++++|++.|++++.+|..|.|||++|+..+
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 122 (136)
T 1d9s_A 86 AREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQG 122 (136)
T ss_dssp HHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 9999999999999999999999999999999999873
No 6
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=6.2e-26 Score=128.44 Aligned_cols=111 Identities=23% Similarity=0.271 Sum_probs=96.5
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
+..+.++++.|+..|+.+.+.. |.+.+.+++..+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+.
T Consensus 31 ~~~g~t~L~~A~~~~~~~~v~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 109 (153)
T 1awc_B 31 DWLGTSPLHLAAQYGHFSTTEV-LLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATE 109 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHH-HHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHH-HHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 3456788999999998865544 5567889998899999999999999999999999999988774 448899999999
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.++.+++++|++.|++++.++..|.||+++|+..
T Consensus 110 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 143 (153)
T 1awc_B 110 HNHQEVVELLIKYGADVHTQSKFCKTAFDISIDN 143 (153)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999999988
No 7
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=3e-26 Score=131.09 Aligned_cols=112 Identities=28% Similarity=0.411 Sum_probs=71.6
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
+..+.++++.|+..|+.+.+..++...+.+++..+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 344556666666666666666666555555555566666666666666666666666666665542 336666666666
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.++.+++++|++.|++++.+|..|.||||+|+..
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 118 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK 118 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHc
Confidence 6666666666666666666666666666666665
No 8
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=8.6e-26 Score=131.31 Aligned_cols=109 Identities=31% Similarity=0.482 Sum_probs=100.0
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCccHHHHHHHh
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK---GQRSSSLHYAACF 81 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~---~~g~t~l~~a~~~ 81 (121)
.+.++++.|+..|+.+.+..++. +.+++..|..|.||||+|+..++.+++++|++.|++++. ..|+||||+|+..
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 45688999999999988877665 889999999999999999999999999999999998863 4589999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 82 GRPSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 82 ~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
++.+++++|++.|++++.+|..|.||+++|++.+
T Consensus 121 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 121 VRPEVVEALVELGADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhc
Confidence 9999999999999999999999999999999874
No 9
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=5.2e-26 Score=126.65 Aligned_cols=112 Identities=28% Similarity=0.280 Sum_probs=101.4
Q ss_pred CCCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC--CCccHHHHHH
Q psy15272 2 QTCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKG--QRSSSLHYAA 79 (121)
Q Consensus 2 ~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~--~g~t~l~~a~ 79 (121)
.+..+.++++.|+..++.+.+..++ +.+.+++..|..|.||||+|+..++.+++++|++.|++++.. .|.||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLL-QNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 4567889999999999997775554 568999999999999999999999999999999999988744 4889999999
Q ss_pred HhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 80 CFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 80 ~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
..++.+++++|++.|++++.+|..|.||+++|+..
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 119 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDE 119 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhc
Confidence 99999999999999999999999999999998776
No 10
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=2e-25 Score=129.28 Aligned_cols=108 Identities=29% Similarity=0.370 Sum_probs=74.6
Q ss_pred hHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCH
Q psy15272 7 KRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRP 84 (121)
Q Consensus 7 ~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~ 84 (121)
.++++.|+..|+.+.+..++...+.+++..+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..++.
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 85 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHR 85 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 34567777777776666666666666666677777777777777777777777777766653 3366777777777777
Q ss_pred HHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 85 SVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 85 ~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+++++|++.|++++.+|..|.||||+|+..
T Consensus 86 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 115 (179)
T 3f6q_A 86 DIVQKLLQYKADINAVNEHGNVPLHYACFW 115 (179)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 777777777777777777777777777665
No 11
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=3.2e-25 Score=127.54 Aligned_cols=111 Identities=23% Similarity=0.238 Sum_probs=95.0
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
+..+.++++.|+..++.+.+..++ +.+.+++..+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+.
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 111 (172)
T 3v30_A 33 DERGFTPLIWASAFGEIETVRFLL-EWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVR 111 (172)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHH-HcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 345678899999999886665555 55888888888999999999999999999999999888774 458899999999
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.++.+++++|++.|++++.++..|.||+++|+..
T Consensus 112 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 145 (172)
T 3v30_A 112 GNHVKCVEALLARGADLTTEADSGYTPMDLAVAL 145 (172)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHh
Confidence 9999999999999999999999999999999887
No 12
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=5.2e-25 Score=126.15 Aligned_cols=110 Identities=21% Similarity=0.267 Sum_probs=82.7
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHh
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACF 81 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~ 81 (121)
..+.++++.|+..++.+.+.. |.+.+.+++..+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 112 (167)
T 3v31_A 34 EEGFTPLMWAAAHGQIAVVEF-LLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHG 112 (167)
T ss_dssp TTSCCHHHHHHHTTCHHHHHH-HHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHCCCHHHHHH-HHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHc
Confidence 455677778888877755544 4445777777777788888888888888888888887777663 3477888888888
Q ss_pred CCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 82 GRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 82 ~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
++.+++++|++.|++++.++..|.||+++|+..
T Consensus 113 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 113 NHVKCVKMLLESGADPTIETDSGYNSMDLAVAL 145 (167)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 888888888888888888888888888888776
No 13
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.93 E-value=7.7e-26 Score=138.59 Aligned_cols=109 Identities=24% Similarity=0.275 Sum_probs=80.1
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFG 82 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~ 82 (121)
.+.++++.|+..++.+.+ ++|.+.|.+++.+|..|.||||+|+..|+.+++++|++.|++++. ..|.||||+|+..|
T Consensus 118 ~g~t~l~~a~~~~~~~~~-~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g 196 (269)
T 4b93_B 118 DQAVPLHLACQQGHFQVV-KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEK 196 (269)
T ss_dssp TCCCHHHHHHHHTCHHHH-HHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCCCccccccccChHHHH-HHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC
Confidence 344555555555555333 334455677777778888888888888888888888888877763 34778888888888
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+.+++++|++.|++++.+|..|.||||+|+++
T Consensus 197 ~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 197 HVFVVELLLLHGASVQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTT
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhC
Confidence 88888888888888888888888888887765
No 14
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=7e-25 Score=125.95 Aligned_cols=107 Identities=36% Similarity=0.488 Sum_probs=52.5
Q ss_pred hHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCH
Q psy15272 7 KRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRP 84 (121)
Q Consensus 7 ~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~ 84 (121)
.++++.|+..|+.+.++.++ +.+.+++..|..|.||||+|+..++.+++++|++.|.+++. ..|.||||+|+..++.
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 93 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILM-ANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHL 93 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred cchHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 34455555555554443322 23445555555555555555555555555555555544432 2244555555555555
Q ss_pred HHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 85 SVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 85 ~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+++++|++.|++++.+|..|.||||+|+..
T Consensus 94 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 123 (169)
T 2y1l_E 94 EIVEVLLKNGADVNANDMEGHTPLHLAAMF 123 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 555555555555555555555555555444
No 15
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=7.6e-25 Score=125.82 Aligned_cols=112 Identities=32% Similarity=0.418 Sum_probs=101.0
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
+..+.++++.|+..++.+.+.. |.+.+.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+.
T Consensus 44 ~~~g~t~L~~A~~~~~~~~v~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 122 (169)
T 2y1l_E 44 DASGWTPLHLAAFNGHLEIVEV-LLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAM 122 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHH-HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 3567789999999999966655 5566899999999999999999999999999999999998874 458999999999
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
.++.+++++|++.|++++.+|..|.||+++|++.+
T Consensus 123 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 157 (169)
T 2y1l_E 123 FGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNG 157 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC
Confidence 99999999999999999999999999999999883
No 16
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=3.9e-25 Score=125.34 Aligned_cols=106 Identities=25% Similarity=0.328 Sum_probs=52.0
Q ss_pred HHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCHH
Q psy15272 8 RQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRPS 85 (121)
Q Consensus 8 ~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~~ 85 (121)
++++.|+..|+.+.+..++...+.+++..+..|.||||+ +..++.+++++|++.|++++. ..|.||||+|+..|+.+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 82 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD 82 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred hHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 445555555555444444444333444444455555555 444555555555555444432 22445555555555555
Q ss_pred HHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 86 VAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 86 ~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
++++|++.|++++.+|..|.||||+|++.
T Consensus 83 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 111 (156)
T 1bd8_A 83 TLKVLVEHGADVNVPDGTGALPIHLAVQE 111 (156)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHh
Confidence 55555555555555555555555555444
No 17
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=8.6e-26 Score=128.31 Aligned_cols=109 Identities=25% Similarity=0.261 Sum_probs=98.5
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCcc-HHHHHHH
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSS-SLHYAAC 80 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t-~l~~a~~ 80 (121)
..+.++|+.|+..|+.+.+..++ +.|.+++..+..|.||||+|+ .++.+++++|++.|++++. ..|.| |||+|+.
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALL-EAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHH-TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred ccchHHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHH
Confidence 45688999999999997776655 568999999999999999985 8999999999999998874 44888 9999999
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.|+.+++++|++.|++++.+|..|.||||+|+..
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 121 (156)
T 1bi7_B 88 EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEEL 121 (156)
T ss_dssp HTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHh
Confidence 9999999999999999999999999999999987
No 18
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=5.2e-25 Score=128.70 Aligned_cols=110 Identities=34% Similarity=0.398 Sum_probs=70.6
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHh
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACF 81 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~ 81 (121)
..+.++++.|+..++.+.+..++ +.+.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..
T Consensus 66 ~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 144 (192)
T 2rfm_A 66 IEGSTALIWAVKNNRLGIAEKLL-SKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKY 144 (192)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHH
T ss_pred ccCccHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 34556666666666664444433 33566666666666677766666666666666666666553 3366677777766
Q ss_pred CCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 82 GRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 82 ~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
++.+++++|++.|++++.+|..|.||+++|+..
T Consensus 145 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 177 (192)
T 2rfm_A 145 GRSEIVKKLLELGADISARDLTGLTAEASARIF 177 (192)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHT
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHh
Confidence 677777777766776666666777777766665
No 19
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=3.7e-25 Score=133.85 Aligned_cols=108 Identities=31% Similarity=0.481 Sum_probs=99.1
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCccHHHHHHHh
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK---GQRSSSLHYAACF 81 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~---~~g~t~l~~a~~~ 81 (121)
.+.++++.|+..|+.+.+..++. +.+++..|..|.||||+|+..|+.+++++|++.|++++. ..|+||||+|+..
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 35688999999999987777665 889999999999999999999999999999999998863 4489999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 82 GRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 82 ~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
|+.+++++|++.|++++.+|..|.||||+|++.
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDERGLTALELAREI 154 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH
Confidence 999999999999999999999999999999865
No 20
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=1e-24 Score=119.36 Aligned_cols=108 Identities=34% Similarity=0.479 Sum_probs=98.9
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCC
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGR 83 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~ 83 (121)
+.++++.|+..++.+.+..++. .+.+++..+..|.||||+|+..++.+++++|++.|.+++. ..|.||||+|+..++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CccHHHHHHHcCcHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 5678999999999977766665 5889999999999999999999999999999999988864 458999999999999
Q ss_pred HHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 84 PSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 84 ~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.+++++|++.|++++.+|..|.||+++|+..
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 111 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARN 111 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999987
No 21
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=4.8e-25 Score=126.30 Aligned_cols=109 Identities=30% Similarity=0.360 Sum_probs=100.0
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCccHHHHHHHhCC
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN--KGQRSSSLHYAACFGR 83 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~--~~~g~t~l~~a~~~~~ 83 (121)
+.++++.|+..|+.+.+..++.. +.+++..|..|.||||+|+..++.+++++|++.|++++ +..|.||||+|+..++
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CcchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 56789999999999888777766 78899999999999999999999999999999998877 4458899999999999
Q ss_pred HHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 84 PSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 84 ~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
.+++++|++.|++++.++..|.||||+|+..+
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 113 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGN 113 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcC
Confidence 99999999999999999999999999999873
No 22
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=2.9e-25 Score=127.75 Aligned_cols=108 Identities=34% Similarity=0.415 Sum_probs=98.8
Q ss_pred hHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCH
Q psy15272 7 KRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRP 84 (121)
Q Consensus 7 ~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~ 84 (121)
..+++.|+..|+.+.+..++......++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..++.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYT 82 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCH
Confidence 46799999999999998888776555888899999999999999999999999999998874 4589999999999999
Q ss_pred HHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 85 SVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 85 ~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+++++|++.|++++.++..|.||||+|+..
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 112 (172)
T 3v30_A 83 DIVGLLLERDVDINIYDWNGGTPLLYAVRG 112 (172)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 999999999999999999999999999988
No 23
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=5.5e-25 Score=128.62 Aligned_cols=113 Identities=25% Similarity=0.317 Sum_probs=102.4
Q ss_pred CCCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHH
Q psy15272 2 QTCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAA 79 (121)
Q Consensus 2 ~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~ 79 (121)
.+..+.++++.|+..|+.+.+..++.. +.+++..+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 109 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSI 109 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 356778999999999999777766654 789999999999999999999999999999999998874 45899999999
Q ss_pred HhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 80 CFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 80 ~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
..++.+++++|++.|++++.++..|.||||+|+..+
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 145 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYG 145 (192)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 999999999999999999999999999999999873
No 24
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=8.4e-25 Score=125.07 Aligned_cols=108 Identities=31% Similarity=0.423 Sum_probs=97.6
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFG 82 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~ 82 (121)
.+.++++.|+..++.+.+.. |.+.+.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..+
T Consensus 41 ~g~t~L~~A~~~~~~~~v~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 119 (165)
T 3twr_A 41 RQSTPLHFAAGYNRVSVVEY-LLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKG 119 (165)
T ss_dssp TCCCHHHHHHHTTCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcChHHHHHH-HHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcC
Confidence 45688999999999866655 5566899999999999999999999999999999999998874 45899999999999
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHh
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARE 113 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~ 113 (121)
+.+++++|++.|++++.+|..|.||+++|++
T Consensus 120 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 120 KYEICKLLLQHGADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT
T ss_pred CHHHHHHHHHcCCCCcccCCCCCChhHhHhc
Confidence 9999999999999999999999999999765
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.93 E-value=7.5e-25 Score=134.21 Aligned_cols=111 Identities=22% Similarity=0.225 Sum_probs=94.3
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
+..+.+||+.|+..|+.+.+ ++|...+.+++..+..|.||+++|+..++.++++.|++.|++++. ..|+||||+|+.
T Consensus 83 d~~G~TpLh~A~~~g~~~~v-~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~ 161 (269)
T 4b93_B 83 SQDGSSPLHVAALHGRADLI-PLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACS 161 (269)
T ss_dssp CTTSCCHHHHHHHTTCTTHH-HHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHH-HHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 44567888889988888555 445566888888888889999999999999999999998888774 458899999999
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.|+.+++++|++.|++++.++..|.||||+|+..
T Consensus 162 ~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~ 195 (269)
T 4b93_B 162 GGHHELVALLLQHGASINASNNKGNTALHEAVIE 195 (269)
T ss_dssp TTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHT
T ss_pred CCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHc
Confidence 9999999999999999999999999999999988
No 26
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=1.5e-24 Score=131.55 Aligned_cols=110 Identities=32% Similarity=0.397 Sum_probs=84.3
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHh
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACF 81 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~ 81 (121)
..+.++++.|+..++.+.+.. |.+.+.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..
T Consensus 122 ~~g~t~L~~A~~~~~~~~v~~-Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 122 HDGTTPLILAARLAVEGMLED-LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAARE 200 (253)
T ss_dssp TTCCCHHHHHHHHTCSSHHHH-HHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCcHHHHHHHcChHHHHHH-HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHC
Confidence 456677777887777755544 4455777887788888888888888888888888888877663 3477888888888
Q ss_pred CCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 82 GRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 82 ~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
++.+++++|++.|++++.+|..|.||+++|++.
T Consensus 201 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 233 (253)
T 1yyh_A 201 GSYETAKVLLDHFANRDITDHMDRLPRDIAQER 233 (253)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCccccccCCCCHHHHHHHc
Confidence 888888888888888888888888888888877
No 27
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=1.7e-24 Score=122.69 Aligned_cols=110 Identities=28% Similarity=0.341 Sum_probs=98.3
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
+..+.++++. +..|+.+.+.. |.+.|.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+.
T Consensus 33 ~~~g~t~L~~-~~~~~~~~v~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 110 (156)
T 1bd8_A 33 NRFGKTALQV-MMFGSTAIALE-LLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQ 110 (156)
T ss_dssp CTTSCCHHHH-SCTTCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CCCCCcHHHH-HHcCCHHHHHH-HHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 4567788888 88898866655 5566999999999999999999999999999999999998874 458999999999
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
.|+.+++++|++. ++++.+|..|.||+++|++.+
T Consensus 111 ~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~ 144 (156)
T 1bd8_A 111 EGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRG 144 (156)
T ss_dssp HTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSC
T ss_pred hChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcC
Confidence 9999999999999 999999999999999999883
No 28
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.92 E-value=1.4e-24 Score=125.73 Aligned_cols=111 Identities=26% Similarity=0.358 Sum_probs=100.2
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
+..+.++++.|+..++.+.+.. |.+.+.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+.
T Consensus 36 ~~~g~t~L~~A~~~~~~~~v~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 114 (179)
T 3f6q_A 36 DDHGFSPLHWACREGRSAVVEM-LIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACF 114 (179)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHH-HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHH-HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 3466789999999999966654 5566899999999999999999999999999999999998874 458999999999
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.++.+++++|++.|++++.+|..|.||+++|+..
T Consensus 115 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 115 WGQDQVAEDLVANGALVSICNKYGEMPVDKAKAP 148 (179)
T ss_dssp TTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHH
T ss_pred cCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHH
Confidence 9999999999999999999999999999998776
No 29
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.92 E-value=1.6e-24 Score=129.54 Aligned_cols=113 Identities=32% Similarity=0.418 Sum_probs=65.0
Q ss_pred CCCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHH
Q psy15272 2 QTCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAA 79 (121)
Q Consensus 2 ~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~ 79 (121)
+.+.+..+++.|+..|+.+.+..++...+..++..+..|.||||+|+..|+.+++++|++.|.+++. ..|.||||+|+
T Consensus 2 e~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 81 (231)
T 3aji_A 2 EGCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAA 81 (231)
T ss_dssp -CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred CCccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHH
Confidence 4455555566666666666665555554444455555566666666666666666666665555442 23556666666
Q ss_pred HhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 80 CFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 80 ~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
..++.+++++|++.|++++.++..|.||||+|+..
T Consensus 82 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 116 (231)
T 3aji_A 82 SAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASK 116 (231)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 66666666666666666665555666666665554
No 30
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=3.7e-24 Score=121.14 Aligned_cols=107 Identities=27% Similarity=0.388 Sum_probs=96.2
Q ss_pred hHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCH
Q psy15272 7 KRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRP 84 (121)
Q Consensus 7 ~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~ 84 (121)
.++++.|+..|+.+.+..++.. +.+++ .+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..++.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~-g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMAN-GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH-TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred cHHHHHHHHcCCHHHHHHHHHc-CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 5789999999999888777665 66665 588899999999999999999999999988774 4589999999999999
Q ss_pred HHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 85 SVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 85 ~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
+++++|++.|++++.+|..|.||||+|+..+
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 111 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHN 111 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 9999999999999999999999999999873
No 31
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=1.5e-24 Score=123.60 Aligned_cols=107 Identities=25% Similarity=0.257 Sum_probs=50.9
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCC
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGR 83 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~ 83 (121)
+.++++.|+. ++.+.+. +|.+.+.+++..+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..++
T Consensus 38 g~t~L~~A~~-~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 115 (162)
T 1ihb_A 38 GRTALQVMKL-GNPEIAR-RLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGH 115 (162)
T ss_dssp SCCHHHHCCS-SCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CccHHHHHHc-CcHHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 3344444444 4443222 22233444544455555555555555555555555555544432 224455555555555
Q ss_pred HHHHHHHHHcCCC-CCccCcCCCCHHHHHHhh
Q psy15272 84 PSVAKVLLRHGAN-PDLRDEDGKTPLDKARER 114 (121)
Q Consensus 84 ~~~~~~L~~~~~~-~~~~~~~g~tpl~~a~~~ 114 (121)
.+++++|++.|++ ++.++..|.||+++|+..
T Consensus 116 ~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~ 147 (162)
T 1ihb_A 116 LRVVEFLVKHTASNVGHRNHKGDTACDLARLY 147 (162)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHccCCCCCCcCCCCCcHHHHHHHc
Confidence 5555555555544 345555555555555544
No 32
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=1.7e-24 Score=123.31 Aligned_cols=108 Identities=25% Similarity=0.301 Sum_probs=98.5
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCC
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGR 83 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~ 83 (121)
..++++.|+..|+.+.+..++ +.+.+++..+..|.||||+|+. ++.+++++|++.|++++. ..|.||||+|+..++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLL-QNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHT-TSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HhhHHHHHHHcCCHHHHHHHH-hCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 467899999999997776665 6789999999999999999999 999999999999988874 458999999999999
Q ss_pred HHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 84 PSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 84 ~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
.+++++|++.|++++.++..|.||||+|++.+
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 114 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG 114 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 99999999999999999999999999999883
No 33
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=6.4e-25 Score=130.93 Aligned_cols=108 Identities=31% Similarity=0.434 Sum_probs=98.4
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHc-CCCCC--CCCCccHHHHHHHhC
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCER-GADVN--KGQRSSSLHYAACFG 82 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~-~~~~~--~~~g~t~l~~a~~~~ 82 (121)
+.++|+.|+..|+.+.+..++ +.+.+++..|..|+||||+|+..++.+++++|++. |++++ +..|.||||+|+..|
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECL-DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred cccccccccccCcHHHHHHHH-hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 467899999999997776655 56899999999999999999999999999999998 88876 455899999999999
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+.+++++|++.|++++.+|..|.||+++|+..
T Consensus 152 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 183 (222)
T 3ehr_A 152 YADIVQLLLAKGARTDLRNIEKKLAFDMATNA 183 (222)
T ss_dssp CHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSH
T ss_pred CHHHHHHHHHcCCCCccccCCCCCHHHHhcch
Confidence 99999999999999999999999999999876
No 34
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=6.7e-25 Score=128.00 Aligned_cols=111 Identities=16% Similarity=0.196 Sum_probs=96.5
Q ss_pred CchHHHHHHHHhCChH---HHHHHHHhCCCCCccccCCCchHHHHHHHcCC------HHHHHHHHHcCCCCCCC--CCc-
Q psy15272 5 WPKRQLIECIRSKDTD---ALIETIDSGGVEVNFMDDVGQTLLNWASAFGT------QEMVEFLCERGADVNKG--QRS- 72 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~---~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~------~~~~~~l~~~~~~~~~~--~g~- 72 (121)
.+.++|+.|+..++.+ .+.++|.+.|++++.+|..|+||||+|+..+. .++++.|++.|++++.+ .|.
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~t 116 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKI 116 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTB
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCc
Confidence 4678999999999864 46777888899999999999999999999886 57899999999998854 488
Q ss_pred cHHHHHHHhC-----CHHHHHHHHH-cCCCCCccCcCCCCHHHHHHhhc
Q psy15272 73 SSLHYAACFG-----RPSVAKVLLR-HGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 73 t~l~~a~~~~-----~~~~~~~L~~-~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
||||+|+..+ ..+++++|++ .|++++.+|..|.||||+|++.+
T Consensus 117 tpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 117 VVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQ 165 (186)
T ss_dssp CTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTT
T ss_pred hHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcC
Confidence 9999999844 3568999999 89999999999999999999873
No 35
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=3e-24 Score=129.41 Aligned_cols=106 Identities=26% Similarity=0.269 Sum_probs=95.4
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFG 82 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~ 82 (121)
.+.++++.|+..|+.+.+..+ .+.+.+++..|..|.||||+|+..|+.+++++|++.|++++. ..|+||||+|+..|
T Consensus 36 ~~~t~L~~A~~~g~~~~v~~L-l~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 114 (239)
T 1ycs_B 36 LPLALLLDSSLEGEFDLVQRI-IYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN 114 (239)
T ss_dssp -CHHHHHHHHHHTCHHHHHHH-TSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred hhhHHHHHHHHcCCHHHHHHH-HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 457889999999999666555 466889999999999999999999999999999999998874 45899999999999
Q ss_pred CHHHHHHHHHcCCCCCccCcCCC-CHHHHH
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGK-TPLDKA 111 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~-tpl~~a 111 (121)
+.+++++|++.|++++.++..|. ||+++|
T Consensus 115 ~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 115 NVQVCKFLVESGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp CHHHHHHHHHTTCCTTCCCSSSCCCHHHHC
T ss_pred CHHHHHHHHHcCCCcceecCCCCcchHHHH
Confidence 99999999999999999998887 999998
No 36
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=1.5e-24 Score=130.20 Aligned_cols=110 Identities=23% Similarity=0.292 Sum_probs=98.7
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHh
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACF 81 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~ 81 (121)
..+.++++.|+..|+.+.+..++. .|.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~ 97 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVK-EMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASC 97 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHH-HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred cchhHHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 345678999999999977777664 5889999999999999999999999999999999998874 4589999999999
Q ss_pred CCHHHHHHHHHcCCCCCccC-cCCCCHHHHH--Hhh
Q psy15272 82 GRPSVAKVLLRHGANPDLRD-EDGKTPLDKA--RER 114 (121)
Q Consensus 82 ~~~~~~~~L~~~~~~~~~~~-~~g~tpl~~a--~~~ 114 (121)
|+.+++++|++.|++++.++ ..|.|||++| +..
T Consensus 98 g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~ 133 (229)
T 2vge_A 98 NDTVICMALVQHGAAIFATTLSDGATAFEKCDPYRE 133 (229)
T ss_dssp TCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTST
T ss_pred CCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhc
Confidence 99999999999999999986 6999999998 655
No 37
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.92 E-value=4.8e-24 Score=127.66 Aligned_cols=110 Identities=25% Similarity=0.289 Sum_probs=76.2
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCC-----ccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC---------
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEV-----NFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKG--------- 69 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~-----~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~--------- 69 (121)
..+.++++.|+..|+.+.+..++.. +.++ +..|..|.||||+|+..++.+++++|++.|++++..
T Consensus 35 ~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 113 (232)
T 2rfa_A 35 AMGETALHIAALYDNLEAAMVLMEA-APELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYR 113 (232)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHc-CchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeec
Confidence 4456667777777777555554443 4443 444556777777777777777777777777666532
Q ss_pred ------CCccHHHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 70 ------QRSSSLHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 70 ------~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..
T Consensus 114 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~ 164 (232)
T 2rfa_A 114 PHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQ 164 (232)
T ss_dssp TTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTC
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 367788888777777888888877887777777888888877776
No 38
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=6.6e-24 Score=124.58 Aligned_cols=109 Identities=21% Similarity=0.317 Sum_probs=52.8
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcC-CCCC--CCCCccHHHHHHHhC
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERG-ADVN--KGQRSSSLHYAACFG 82 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~-~~~~--~~~g~t~l~~a~~~~ 82 (121)
+.++++.|+..++.+.+..++...+.+++..+..|.||||+|+..++.+++++|++.| .+++ +..|.||||+|+..+
T Consensus 72 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 72 SDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSS
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhc
Confidence 3444444444444444444443444444444444455555555555555555555444 3333 223445555555444
Q ss_pred C-----HHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 83 R-----PSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 83 ~-----~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
. .+++++|++.|++++.+|..|.||+++|++.
T Consensus 152 ~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 188 (201)
T 3hra_A 152 EGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQK 188 (201)
T ss_dssp CCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc
Confidence 4 4555555555555555555555555555544
No 39
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.92 E-value=3.1e-24 Score=134.72 Aligned_cols=110 Identities=29% Similarity=0.420 Sum_probs=102.2
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFG 82 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~ 82 (121)
.+.++++.|+..|+.+.+..++...+.+++..|..|.||||+|+..|+.+++++|++.|++++. ..|.||||+|+..|
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 102 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYG 102 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCC
Confidence 4577899999999999999999888999999999999999999999999999999999998864 45899999999999
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+.+++++|++.|++++.++..|.||||+|+..
T Consensus 103 ~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 134 (351)
T 3utm_A 103 HYEVTELLLKHGACVNAMDLWQFTPLHEAASK 134 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 99999999999999999999999999999987
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.92 E-value=4.5e-24 Score=127.80 Aligned_cols=111 Identities=23% Similarity=0.273 Sum_probs=100.3
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCC-----C--CCCCccHHHH
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADV-----N--KGQRSSSLHY 77 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~-----~--~~~g~t~l~~ 77 (121)
.+.++++.|+..|+.+.+..++...+.+++..|..|+||||+|+..|+.+++++|++.|.++ . +..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 36789999999999988888887779999999999999999999999999999999998765 2 3458999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCCccCc-------------CCCCHHHHHHhhc
Q psy15272 78 AACFGRPSVAKVLLRHGANPDLRDE-------------DGKTPLDKARERV 115 (121)
Q Consensus 78 a~~~~~~~~~~~L~~~~~~~~~~~~-------------~g~tpl~~a~~~~ 115 (121)
|+..|+.+++++|++.|++++.++. .|.||||+|+..+
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 132 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVG 132 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcC
Confidence 9999999999999999999988776 7999999999883
No 41
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.92 E-value=7.5e-24 Score=128.50 Aligned_cols=109 Identities=28% Similarity=0.338 Sum_probs=59.1
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCC
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGR 83 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~ 83 (121)
+.++++.|+..++.+.+..++.....+++..+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..|+
T Consensus 90 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 169 (253)
T 1yyh_A 90 GRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 169 (253)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 344445555555443333333332224444445555555555555555555555555554442 235666666666666
Q ss_pred HHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 84 PSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 84 ~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.+++++|++.|++++.+|..|.||||+|++.
T Consensus 170 ~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 170 VDAAVVLLKNGANKDMQNNREETPLFLAARE 200 (253)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHC
Confidence 6666666666666666666666666666655
No 42
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.92 E-value=8.3e-24 Score=138.95 Aligned_cols=108 Identities=25% Similarity=0.427 Sum_probs=97.6
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCccc------cCCCchHHHHHHH---cCCHHHHHHHHHcCCCCCC--CCCccH
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNFM------DDVGQTLLNWASA---FGTQEMVEFLCERGADVNK--GQRSSS 74 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~------~~~~~~~l~~a~~---~~~~~~~~~l~~~~~~~~~--~~g~t~ 74 (121)
..+.|+.|+..|+.+.+..++.. |.+++.. +..|.||||+|+. .|+.+++++|++.|++++. ..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcH
Confidence 34679999999999888776654 7898876 7889999999976 8999999999999998884 459999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 75 LHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 75 l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
||+|+..|+.+++++|++.|++++.+|..|.||||+|+..
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 250 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKK 250 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999999999999987
No 43
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=8.7e-24 Score=124.06 Aligned_cols=107 Identities=21% Similarity=0.306 Sum_probs=50.3
Q ss_pred hHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHH-HcCCCCC--CCCCccHHHHHHHhCC
Q psy15272 7 KRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLC-ERGADVN--KGQRSSSLHYAACFGR 83 (121)
Q Consensus 7 ~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~-~~~~~~~--~~~g~t~l~~a~~~~~ 83 (121)
.++++.|+..++.+.+.. |.+.|.+++..+..|.||||+|+..++.+++++|+ ..+.+++ +..|.||||+|+..++
T Consensus 40 ~t~L~~A~~~~~~~~v~~-Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~ 118 (201)
T 3hra_A 40 NTPLNIAVHNNDIEIAKA-LIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGH 118 (201)
T ss_dssp CCHHHHHHHHTCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHH-HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCC
Confidence 344444554444433322 22334444444444555555555555555555444 2222332 2224455555555555
Q ss_pred HHHHHHHHHcC-CCCCccCcCCCCHHHHHHhh
Q psy15272 84 PSVAKVLLRHG-ANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 84 ~~~~~~L~~~~-~~~~~~~~~g~tpl~~a~~~ 114 (121)
.+++++|++.| ++++.++..|.||||+|+..
T Consensus 119 ~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 150 (201)
T 3hra_A 119 IDNVKLLLEDGREDIDFQNDFGYTALIEAVGL 150 (201)
T ss_dssp HHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHS
T ss_pred HHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHh
Confidence 55555555554 55555555555555555543
No 44
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.92 E-value=1.8e-23 Score=124.44 Aligned_cols=109 Identities=32% Similarity=0.405 Sum_probs=70.0
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFG 82 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~ 82 (121)
.+.++++.|+..++.+.+.. |.+.+.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..+
T Consensus 91 ~g~t~L~~A~~~~~~~~~~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 169 (223)
T 2f8y_A 91 DGTTPLILAARLAVEGMLED-LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREG 169 (223)
T ss_dssp TCCCHHHHHHHHTCHHHHHH-HHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCCcHHHHHHHhCcHHHHHH-HHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcC
Confidence 44556666666666644433 3345666666666666677766666666666666666666552 33666777777667
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+.+++++|++.|++++.++..|.||+++|++.
T Consensus 170 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 201 (223)
T 2f8y_A 170 SYETAKVLLDHFANRDITDHMDRLPRDIAQER 201 (223)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCccccccCCCHHHHHHHh
Confidence 77777777777776666666677777766665
No 45
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.91 E-value=1.5e-23 Score=127.79 Aligned_cols=111 Identities=26% Similarity=0.188 Sum_probs=83.5
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCccHHHHHHHh
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK-GQRSSSLHYAACF 81 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~-~~g~t~l~~a~~~ 81 (121)
+..+.++++.|+..|+.+.+.. |.+.|.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..
T Consensus 33 ~~~g~t~L~~A~~~g~~~~v~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~ 111 (261)
T 2xai_A 33 TADHVSPLHEACLGGHLSCVKI-LLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARR 111 (261)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHH-HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHc
Confidence 3456677788888887755544 4455777777777888888888888888888888887777653 3477888888888
Q ss_pred CCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 82 GRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 82 ~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
|+.+++++|++.|++++.++..|.||||+|+..
T Consensus 112 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 144 (261)
T 2xai_A 112 GHVECVNSLIAYGGNIDHKISHLGTPLYLACEN 144 (261)
T ss_dssp TCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHT
T ss_pred CcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHh
Confidence 888888888888888888888888888888776
No 46
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.91 E-value=3.1e-24 Score=130.24 Aligned_cols=111 Identities=21% Similarity=0.261 Sum_probs=98.5
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCC-------------CchHHHHHHHcCCHHHHHHHHH---cCCCCC
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDV-------------GQTLLNWASAFGTQEMVEFLCE---RGADVN 67 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~-------------~~~~l~~a~~~~~~~~~~~l~~---~~~~~~ 67 (121)
..+.++++.|+..|+.+.+. +|.+.|.+++..+.. |.||||+|+..++.+++++|++ .|++++
T Consensus 88 ~~g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n 166 (256)
T 2etb_A 88 YQGHSALHIAIEKRSLQCVK-LLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLE 166 (256)
T ss_dssp TTTCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT
T ss_pred ccCCCHHHHHHHcCCHHHHH-HHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcC
Confidence 45789999999999996665 455669999988876 9999999999999999999999 898887
Q ss_pred C--CCCccHHHHHHH--hCCHH-------HHHHHHHcCCCC-------CccCcCCCCHHHHHHhhc
Q psy15272 68 K--GQRSSSLHYAAC--FGRPS-------VAKVLLRHGANP-------DLRDEDGKTPLDKARERV 115 (121)
Q Consensus 68 ~--~~g~t~l~~a~~--~~~~~-------~~~~L~~~~~~~-------~~~~~~g~tpl~~a~~~~ 115 (121)
. ..|+||||+|+. .++.+ ++++|++.|+++ +.+|..|.||||+|+..+
T Consensus 167 ~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 232 (256)
T 2etb_A 167 ATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEG 232 (256)
T ss_dssp CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred ccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhC
Confidence 4 459999999998 77888 999999999999 899999999999999983
No 47
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=1.2e-23 Score=130.76 Aligned_cols=108 Identities=25% Similarity=0.444 Sum_probs=98.0
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCcc------ccCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCC--CCCccH
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNF------MDDVGQTLLNWASAF---GTQEMVEFLCERGADVNK--GQRSSS 74 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~------~~~~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~--~~g~t~ 74 (121)
..++++.|+..++.+.+..++ ..+.+++. .+..|.||||+|+.. ++.+++++|++.|++++. ..|.||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll-~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHH-hcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 346799999999998888876 66888887 588999999999997 889999999999998874 458999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 75 LHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 75 l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
||+|+..|+.+++++|++.|++++.+|..|.|||++|+..
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~ 269 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKK 269 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999999999999987
No 48
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.91 E-value=2.1e-23 Score=124.14 Aligned_cols=108 Identities=28% Similarity=0.346 Sum_probs=51.4
Q ss_pred hHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCH
Q psy15272 7 KRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRP 84 (121)
Q Consensus 7 ~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~ 84 (121)
.++++.|+..++.+.+..++.....+++..+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..++.
T Consensus 59 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 138 (223)
T 2f8y_A 59 RTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNV 138 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCH
Confidence 34444444444443333333332224444444444444444444444444444444444432 2245555555555555
Q ss_pred HHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 85 SVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 85 ~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+++++|++.|++++.++..|.||||+|++.
T Consensus 139 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 168 (223)
T 2f8y_A 139 DAAVVLLKNGANKDMQNNREETPLFLAARE 168 (223)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCcCHHHHHHHc
Confidence 555555555555555555555555555544
No 49
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=2.6e-24 Score=130.81 Aligned_cols=109 Identities=21% Similarity=0.278 Sum_probs=97.0
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCcccc--------------CCCchHHHHHHHcCCHHHHHHHHH---cCCCCC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMD--------------DVGQTLLNWASAFGTQEMVEFLCE---RGADVN 67 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~--------------~~~~~~l~~a~~~~~~~~~~~l~~---~~~~~~ 67 (121)
.+.++|+.|+..|+.+.+. +|.+.|.+++..+ ..|.||||+|+..++.+++++|++ .|++++
T Consensus 92 ~g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~ 170 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVE-LLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR 170 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc
Confidence 6778999999999996655 5556799999888 589999999999999999999999 888887
Q ss_pred C--CCCccHHHHHHHhCC---------HHHHHHHHHcCCCC-------CccCcCCCCHHHHHHhh
Q psy15272 68 K--GQRSSSLHYAACFGR---------PSVAKVLLRHGANP-------DLRDEDGKTPLDKARER 114 (121)
Q Consensus 68 ~--~~g~t~l~~a~~~~~---------~~~~~~L~~~~~~~-------~~~~~~g~tpl~~a~~~ 114 (121)
. ..|+||||+|+..++ .+++++|++.|+++ +.+|..|.||||+|++.
T Consensus 171 ~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 171 RQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKT 235 (260)
T ss_dssp CCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred ccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHc
Confidence 4 459999999998887 68999999999998 78999999999999998
No 50
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=1.6e-23 Score=128.84 Aligned_cols=107 Identities=28% Similarity=0.473 Sum_probs=95.1
Q ss_pred hHHHHHHHHhCChHHHHHHHHhCCCCC------ccccCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCC--CCCccHH
Q psy15272 7 KRQLIECIRSKDTDALIETIDSGGVEV------NFMDDVGQTLLNWASAF---GTQEMVEFLCERGADVNK--GQRSSSL 75 (121)
Q Consensus 7 ~~~l~~a~~~~~~~~v~~ll~~~~~~~------~~~~~~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~--~~g~t~l 75 (121)
-.+++.|+..++.+.+..++.. |.++ +..+..|.||||+|+.. ++.+++++|++.|++++. ..|.|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHh-hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 3568999999999888776654 6674 34478899999999999 899999999999998874 4589999
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 76 HYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 76 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
|+|+..|+.+++++|++.|++++.+|..|.||||+|+..
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 248 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRL 248 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Confidence 999999999999999999999999999999999999987
No 51
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.91 E-value=3.7e-23 Score=123.68 Aligned_cols=84 Identities=30% Similarity=0.453 Sum_probs=33.7
Q ss_pred CCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCH
Q psy15272 30 GVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRPSVAKVLLRHGANPDLRDEDGKTP 107 (121)
Q Consensus 30 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tp 107 (121)
+.+++..+..|.||||+|+..++.+++++|++.|.+++. ..|.||||+|+..++.+++++|++.|++++.++..|.||
T Consensus 96 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 175 (231)
T 3aji_A 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTP 175 (231)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCH
Confidence 333333333334444444444444444444433333321 123344444444444444444444444444444444444
Q ss_pred HHHHHh
Q psy15272 108 LDKARE 113 (121)
Q Consensus 108 l~~a~~ 113 (121)
||+|+.
T Consensus 176 L~~A~~ 181 (231)
T 3aji_A 176 LHLACD 181 (231)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 52
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.91 E-value=2.9e-23 Score=127.54 Aligned_cols=112 Identities=29% Similarity=0.327 Sum_probs=86.8
Q ss_pred CCCCchHHHHHHHHhCChHHHHHHHHhCCC-CCccc--------------------------------------cCCCch
Q psy15272 2 QTCWPKRQLIECIRSKDTDALIETIDSGGV-EVNFM--------------------------------------DDVGQT 42 (121)
Q Consensus 2 ~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~-~~~~~--------------------------------------~~~~~~ 42 (121)
.+..+.++++.|+..|+.+.+..|+.. |. +++.. +..|.|
T Consensus 107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 185 (276)
T 4hbd_A 107 ADSNGNTALHYSVSHANFPVVQQLLDS-GVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQT 185 (276)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT-SCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCC
Confidence 355677888999999988766665554 43 44433 344778
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCHHHHHHHHH-cCCCCCccCcCCCCHHHHHHhh
Q psy15272 43 LLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRPSVAKVLLR-HGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 43 ~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~L~~-~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
|||+|+..|+.+++++|++.|++++. ..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..
T Consensus 186 pLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 186 ALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDA 260 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHc
Confidence 88888888888888888888887763 448888888888888888888888 6888888888888888888887
No 53
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.91 E-value=3.2e-23 Score=123.67 Aligned_cols=110 Identities=23% Similarity=0.210 Sum_probs=66.4
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCC--CCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHH
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGG--VEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAA 79 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~--~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~ 79 (121)
..+.++++.|+..++.+.+.. |.+.+ .+++..+..|.||||+|+..++.+++++|++.|.+++. ..|.||||+|+
T Consensus 70 ~~g~t~L~~A~~~~~~~~~~~-Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 148 (228)
T 2dzn_A 70 DSGWTPFHIACSVGNLEVVKS-LYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAA 148 (228)
T ss_dssp TTSCCHHHHHHHHCCHHHHHH-HHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHH-HHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 344556666666666544433 33334 55555566666666666666666666666666665542 23566666666
Q ss_pred HhCCHHHHHHHHHcC-CCCCccCcCCCCHHHHHHhh
Q psy15272 80 CFGRPSVAKVLLRHG-ANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 80 ~~~~~~~~~~L~~~~-~~~~~~~~~g~tpl~~a~~~ 114 (121)
..|+.+++++|++.| ++++.+|..|.||||+|+..
T Consensus 149 ~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~ 184 (228)
T 2dzn_A 149 SVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184 (228)
T ss_dssp HTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHT
T ss_pred HcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHc
Confidence 666666666666666 66666666666666666655
No 54
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.91 E-value=5.4e-24 Score=134.82 Aligned_cols=110 Identities=19% Similarity=0.270 Sum_probs=99.0
Q ss_pred CCchHHHHHHHHhC--ChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCC-----CC--CCCCccH
Q psy15272 4 CWPKRQLIECIRSK--DTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD-----VN--KGQRSSS 74 (121)
Q Consensus 4 ~~~~~~l~~a~~~~--~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~-----~~--~~~g~t~ 74 (121)
..+.++++.|+..| +.+.+.. |.+.|.+++..|..|.||||+|+..++.+++++|++.|++ ++ +..|.||
T Consensus 136 ~~g~t~L~~A~~~g~~~~~~v~~-Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~ 214 (364)
T 3ljn_A 136 CKGQTALHWCVGLGPEYLEMIKI-LVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSH 214 (364)
T ss_dssp ESCCCHHHHHHHSCGGGHHHHHH-HHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCT
T ss_pred CCCCCHHHHHHHcCCchHHHHHH-HHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcH
Confidence 35678999999999 7766655 5555999999999999999999999999999999999887 55 4458999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 75 LHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 75 l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
||+|+..|+.+++++|++.|++++.+|..|.|||++|++.
T Consensus 215 L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 254 (364)
T 3ljn_A 215 LHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRA 254 (364)
T ss_dssp THHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHh
Confidence 9999999999999999999999999999999999999998
No 55
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.91 E-value=1.3e-23 Score=128.62 Aligned_cols=112 Identities=21% Similarity=0.212 Sum_probs=87.0
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccC-CCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDD-VGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAA 79 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~ 79 (121)
+..+.++++.|+..|+.+.+..|+ +.|.+++..+. .|.||||+|+..++.+++++|++.|++++. ..|.||||+|+
T Consensus 155 ~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 233 (282)
T 1oy3_D 155 NYDGHTPLHVAVIHKDAEMVRLLR-DAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSAL 233 (282)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHH
Confidence 346778999999999986665554 56899998875 499999999999999999999999998874 45899999999
Q ss_pred HhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 80 CFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 80 ~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
..++.+++++|+++|++++.++..|.||+++|....
T Consensus 234 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 234 LRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp TSSCHHHHHHHHHTTCCCCCCC--------------
T ss_pred HcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence 999999999999999999999999999999998764
No 56
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.91 E-value=2.7e-23 Score=128.41 Aligned_cols=110 Identities=26% Similarity=0.339 Sum_probs=79.7
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC---------------
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--------------- 68 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--------------- 68 (121)
..+.++++.|+..|+.+.+.. |.+.|.+++..|..|.||||+|+..|+.+++++|++.|++++.
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~-Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 149 (299)
T 1s70_B 71 VDGLTALHQACIDDNVDMVKF-LVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEE 149 (299)
T ss_dssp TTCCBHHHHHHHTTCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSH
T ss_pred CCCCCHHHHHHHcCCHHHHHH-HHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhc
Confidence 345677777777777754444 4455777777777777888888877777777777777765431
Q ss_pred -----------------------------------------------CCCccHHHHHHHhCCHHHHHHHHHcCCCCCccC
Q psy15272 69 -----------------------------------------------GQRSSSLHYAACFGRPSVAKVLLRHGANPDLRD 101 (121)
Q Consensus 69 -----------------------------------------------~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~ 101 (121)
..|.||||+|+..|+.+++++|++.|++++.+|
T Consensus 150 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d 229 (299)
T 1s70_B 150 AMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD 229 (299)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC
T ss_pred chHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcC
Confidence 125577777777888888888888888888888
Q ss_pred cCCCCHHHHHHhh
Q psy15272 102 EDGKTPLDKARER 114 (121)
Q Consensus 102 ~~g~tpl~~a~~~ 114 (121)
..|.||||+|+..
T Consensus 230 ~~g~tpL~~A~~~ 242 (299)
T 1s70_B 230 YDGWTPLHAAAHW 242 (299)
T ss_dssp TTCCCHHHHHHHT
T ss_pred CCCCcHHHHHHhc
Confidence 8888888888776
No 57
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.91 E-value=2.4e-23 Score=124.87 Aligned_cols=109 Identities=25% Similarity=0.323 Sum_probs=70.9
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFG 82 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~ 82 (121)
.+.++++.|+..++.+.+. +|.+.|.+++..+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..+
T Consensus 110 ~g~t~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 188 (237)
T 3b7b_A 110 GGWTPMIWATEYKHVDLVK-LLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAAREN 188 (237)
T ss_dssp TSCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHH-HHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC
Confidence 4455666666666664443 34445666666666666777777777777777777766666553 33667777777777
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+.+++++|++.|++++.+|..|.||+++|+..
T Consensus 189 ~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 220 (237)
T 3b7b_A 189 RYDCVVLFLSRDSDVTLKNKEGETPLQCASLN 220 (237)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTT
T ss_pred CHhHHHHHHHcCCCCCccCCCCCCHHHHHHHH
Confidence 77777777777777777777777777776665
No 58
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=2e-23 Score=132.64 Aligned_cols=108 Identities=29% Similarity=0.448 Sum_probs=97.9
Q ss_pred chHHHHHHHHh-CChHHHHHHHHhCCCCCcccc--CCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 6 PKRQLIECIRS-KDTDALIETIDSGGVEVNFMD--DVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 6 ~~~~l~~a~~~-~~~~~v~~ll~~~~~~~~~~~--~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
+.++|+.|+.. ++.+.+..++ ..|.+++..+ ..|.||||+|+..++.+++++|++.|++++. ..|+||||+|+.
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL-~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADAL-AHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHH-HTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHH-HcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 35678899999 9997776655 6689999888 8899999999999999999999999998874 458999999999
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.|+.+++++|++.|++++.+|..|.||||+|+..
T Consensus 278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~ 311 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMET 311 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHC
Confidence 9999999999999999999999999999999988
No 59
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.91 E-value=1.4e-23 Score=129.64 Aligned_cols=109 Identities=30% Similarity=0.456 Sum_probs=99.4
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFG 82 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~ 82 (121)
.+.++++.|+..|+.+.+..++.. |.+++..|..|.||||+|+..|+.+++++|++.|++++. ..|.||||+|+..|
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCG 117 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHH-CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCccHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 346789999999999888776654 789999999999999999999999999999999998874 45899999999999
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+.+++++|++.|++++.++..|.|||++|+..
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 149 (299)
T 1s70_B 118 YLDIAEYLISQGAHVGAVNSEGDTPLDIAEEE 149 (299)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSH
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhc
Confidence 99999999999999999999999999998765
No 60
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=9.5e-24 Score=129.21 Aligned_cols=110 Identities=21% Similarity=0.275 Sum_probs=97.6
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccC--------------CCchHHHHHHHcCCHHHHHHHHH---cCCCC
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDD--------------VGQTLLNWASAFGTQEMVEFLCE---RGADV 66 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~--------------~~~~~l~~a~~~~~~~~~~~l~~---~~~~~ 66 (121)
..+.++|+.|+..|+.+.+.. |.+.|.+++..+. .|.||||+|+..++.+++++|++ .|+++
T Consensus 99 ~~g~tpL~~A~~~g~~~~v~~-Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~ 177 (273)
T 2pnn_A 99 YKGQTALHIAIERRNMTLVTL-LVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI 177 (273)
T ss_dssp TTTCCHHHHHHHTTCHHHHHH-HHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred CCCCCHHHHHHHcCCHHHHHH-HHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc
Confidence 467899999999999966655 5566999998886 79999999999999999999999 88888
Q ss_pred CC--CCCccHHHHHHHhCC---------HHHHHHHHHcCCCCC-------ccCcCCCCHHHHHHhh
Q psy15272 67 NK--GQRSSSLHYAACFGR---------PSVAKVLLRHGANPD-------LRDEDGKTPLDKARER 114 (121)
Q Consensus 67 ~~--~~g~t~l~~a~~~~~---------~~~~~~L~~~~~~~~-------~~~~~g~tpl~~a~~~ 114 (121)
+. ..|+||||+|+..++ .+++++|++.|++++ .+|..|.||||+|++.
T Consensus 178 ~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 178 SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 74 458999999999988 789999999999986 5899999999999998
No 61
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.91 E-value=1.9e-23 Score=127.88 Aligned_cols=83 Identities=36% Similarity=0.424 Sum_probs=76.6
Q ss_pred CccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC---CCccHHHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHH
Q psy15272 33 VNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKG---QRSSSLHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLD 109 (121)
Q Consensus 33 ~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~---~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~ 109 (121)
++..+..|.||||+|+..++.+++++|++.|++++.. .|.||||+|+..|+.+++++|++.|++++.+|..|.||||
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~ 230 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLG 230 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHH
Confidence 5667888999999999999999999999999988743 3899999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy15272 110 KARERV 115 (121)
Q Consensus 110 ~a~~~~ 115 (121)
+|+..+
T Consensus 231 ~A~~~~ 236 (282)
T 1oy3_D 231 SALLRP 236 (282)
T ss_dssp HHHTSS
T ss_pred HHHHcC
Confidence 999873
No 62
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.91 E-value=8.4e-24 Score=127.03 Aligned_cols=109 Identities=28% Similarity=0.309 Sum_probs=50.1
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCC---CCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCccHHHHHH
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGG---VEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK---GQRSSSLHYAA 79 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~---~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~---~~g~t~l~~a~ 79 (121)
+.++++.|+..++.+.+..++.... .+++..+..|.||||+|+..++.+++++|++.|.+++. ..|.||||+|+
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~ 158 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAV 158 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHH
Confidence 3444444555444444433333211 13444444444555555555555555555544444432 22444555555
Q ss_pred HhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 80 CFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 80 ~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
..++.+++++|++.|++++.++..|.||||+|+..
T Consensus 159 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 193 (241)
T 1k1a_A 159 ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGR 193 (241)
T ss_dssp HTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 44555555555544554444444455555544444
No 63
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.91 E-value=5.5e-24 Score=129.14 Aligned_cols=111 Identities=23% Similarity=0.205 Sum_probs=97.6
Q ss_pred CchHHHHHHHHhCChHHH---HHHHHhCCCCCcc----ccCCCchHHHHHHHc---CCHHHHHHHHHcCCCCC-------
Q psy15272 5 WPKRQLIECIRSKDTDAL---IETIDSGGVEVNF----MDDVGQTLLNWASAF---GTQEMVEFLCERGADVN------- 67 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v---~~ll~~~~~~~~~----~~~~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~------- 67 (121)
++.++|+.|+..|+.+.+ .+++...+.+++. .|..|.||||+|+.. ++.+++++|++.|++++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 478899999999999854 3445567899998 899999999999999 99999999999886554
Q ss_pred ------CCCCccHHHHHHHhCCHHHHHHHHHcCCCCCccCcC-------------CCCHHHHHHhhc
Q psy15272 68 ------KGQRSSSLHYAACFGRPSVAKVLLRHGANPDLRDED-------------GKTPLDKARERV 115 (121)
Q Consensus 68 ------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~-------------g~tpl~~a~~~~ 115 (121)
+..|.||||+|+..|+.+++++|++.|++++.++.. |.||||+|+..+
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~ 147 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK 147 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTT
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcC
Confidence 134899999999999999999999999999999886 999999999883
No 64
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.90 E-value=1.4e-23 Score=125.96 Aligned_cols=109 Identities=20% Similarity=0.276 Sum_probs=64.9
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCC--------CCCCCccHHH
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADV--------NKGQRSSSLH 76 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~--------~~~~g~t~l~ 76 (121)
.+.++++.|+..++.+.+ ++|.+.|.+++..+..|.||||+|+..++.+++++|+..+.++ .+..|.||||
T Consensus 44 ~g~t~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~ 122 (236)
T 1ikn_D 44 LQQTPLHLAVITNQPEIA-EALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 122 (236)
T ss_dssp TCCCHHHHHHHTTCHHHH-HCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHH
T ss_pred CCCCHHHHHHHcCCHHHH-HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHH
Confidence 345566666666665333 3344456666666666666666666666666666666655431 1233566666
Q ss_pred HHHHhCCHHHHHHHHHcCCCCCccCc-CCCCHHHHHHhh
Q psy15272 77 YAACFGRPSVAKVLLRHGANPDLRDE-DGKTPLDKARER 114 (121)
Q Consensus 77 ~a~~~~~~~~~~~L~~~~~~~~~~~~-~g~tpl~~a~~~ 114 (121)
+|+..|+.+++++|++.|++++.++. .|.||||+|+..
T Consensus 123 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~ 161 (236)
T 1ikn_D 123 LASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL 161 (236)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc
Confidence 66666666666666666666666665 666666666655
No 65
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=3.5e-23 Score=133.75 Aligned_cols=110 Identities=31% Similarity=0.360 Sum_probs=85.9
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHh
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACF 81 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~ 81 (121)
..+.++++.|+..++.+.+.. |.+.+.+++..+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..
T Consensus 276 ~~g~t~L~~A~~~~~~~~~~~-Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~ 354 (437)
T 1n11_A 276 KSGLTPLHLVAQEGHVPVADV-LIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQ 354 (437)
T ss_dssp TTCCCHHHHHHHHTCHHHHHH-HHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHH-HHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHC
Confidence 455677788888887755544 4455777887788888888888888888888888888887764 3477888888888
Q ss_pred CCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 82 GRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 82 ~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
|+.+++++|++.|++++.+|..|.||+++|++.
T Consensus 355 g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 355 GHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp TCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred ChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 888888888888888888888888888888776
No 66
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.90 E-value=7.7e-23 Score=122.70 Aligned_cols=110 Identities=25% Similarity=0.389 Sum_probs=73.6
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFG 82 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~ 82 (121)
.+.++++.|+..++.+.+..++...+.+++..+..|.||+|+|+..++.+++++|++.|.+++. ..|.||||+|+..|
T Consensus 76 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 76 EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSG 155 (237)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCC
Confidence 4455666667666665554444443356666666677777777777777777777777666553 33667777777777
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+.+++++|++.|++++.+|..|.||||+|++.
T Consensus 156 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 187 (237)
T 3b7b_A 156 CVDIAEILLAAKCDLHAVNIHGDSPLHIAARE 187 (237)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHh
Confidence 77777777777777777777777777777665
No 67
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.90 E-value=2.7e-23 Score=126.60 Aligned_cols=109 Identities=23% Similarity=0.257 Sum_probs=84.6
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCccHHHHHHHhCC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN-KGQRSSSLHYAACFGR 83 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~-~~~g~t~l~~a~~~~~ 83 (121)
.+.++++.|+..++.+.+ ++|.+.|.+++..|..|.||||+|+..++.+++++|++.|++++ +..|.||||+|+..++
T Consensus 100 ~g~t~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~ 178 (261)
T 2xai_A 100 DLASPIHEAARRGHVECV-NSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTAS 178 (261)
T ss_dssp TTCCHHHHHHHTTCHHHH-HHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCcHHHH-HHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCC
Confidence 355677888888877544 44555677888888888888888888888888888888887776 3447788888888888
Q ss_pred HHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 84 PSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 84 ~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.+++++|++.|++++.+|..|.||+++|+..
T Consensus 179 ~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 179 EELACLLMDFGADTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCChhhhcccc
Confidence 8888888888888888888888888887654
No 68
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.90 E-value=7.1e-23 Score=126.25 Aligned_cols=108 Identities=26% Similarity=0.205 Sum_probs=56.5
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCccHHHHHHHhCCH
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN-KGQRSSSLHYAACFGRP 84 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~-~~~g~t~l~~a~~~~~~ 84 (121)
+.++++.|+..|+.+.+.. |.+.+.+++..|..|.||||+|+..++.+++++|++.|.+++ ...|.||||+|+..|+.
T Consensus 92 g~t~L~~A~~~g~~~~v~~-Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~ 170 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKI-LLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHV 170 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHH-HHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCH
T ss_pred CCCHHHHHHHCCcHHHHHH-HHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 3444555555555433322 223345555555555555555555555555555555554443 22255555555555555
Q ss_pred HHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 85 SVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 85 ~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+++++|++.|++++.++..|.||||+|+..
T Consensus 171 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 200 (285)
T 3d9h_A 171 ECVNSLIAYGGNIDHKISHLGTPLYLACEN 200 (285)
T ss_dssp HHHHHHHHTTCCTTCCBTTTBCHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence 555666555666666666666666666555
No 69
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.90 E-value=1.3e-22 Score=121.90 Aligned_cols=112 Identities=22% Similarity=0.269 Sum_probs=68.3
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHH---hCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCccHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETID---SGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN--KGQRSSSLHY 77 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~---~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~--~~~g~t~l~~ 77 (121)
+..+.++++.|+..|+.+.+..++. +.+.+++..|..|.||||+|+..++.+++++|++.|.+++ +..|.||||+
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 85 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHL 85 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 3455666666666666666555554 3556666666666666666666666666666666666554 2335566666
Q ss_pred HHHhCCHHHHHHHHHcCC----CCCccCcCCCCHHHHHHhh
Q psy15272 78 AACFGRPSVAKVLLRHGA----NPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 78 a~~~~~~~~~~~L~~~~~----~~~~~~~~g~tpl~~a~~~ 114 (121)
|+..++.+++++|++.++ +++.++..|.||||+|+..
T Consensus 86 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~ 126 (241)
T 1k1a_A 86 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNT 126 (241)
T ss_dssp HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHc
Confidence 666666666666666654 5555566666666666554
No 70
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.90 E-value=3.9e-23 Score=123.27 Aligned_cols=111 Identities=27% Similarity=0.291 Sum_probs=99.2
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcC-CCCC--CCCCccHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERG-ADVN--KGQRSSSLHYAA 79 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~-~~~~--~~~g~t~l~~a~ 79 (121)
+..+.++++.|+..++.+.+.. |.+.|.+++..|..|.||||+|+..++.+++++|++.| .+++ +..|.||||+|+
T Consensus 104 ~~~g~t~L~~A~~~~~~~~~~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~ 182 (228)
T 2dzn_A 104 TNQGVTCLHLAVGKKWFEVSQF-LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHAL 182 (228)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHH-HHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHH
T ss_pred CcCCCCHHHHHHHcCCHhHHHH-HHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHH
Confidence 3457789999999999866655 55669999999999999999999999999999999999 7766 456999999999
Q ss_pred HhCCHHHHHHHH-HcCCCCCccCcCCCCHHHHHHhh
Q psy15272 80 CFGRPSVAKVLL-RHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 80 ~~~~~~~~~~L~-~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
..++.+++++|+ +.|++++.+|..|.||+++|+..
T Consensus 183 ~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 183 AEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp HTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred HcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 999999999999 88999999999999999998765
No 71
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.90 E-value=7.3e-23 Score=124.39 Aligned_cols=111 Identities=25% Similarity=0.259 Sum_probs=95.2
Q ss_pred CCchHHHHHHH---HhCChHHHHHHHHhC----------CCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC-
Q psy15272 4 CWPKRQLIECI---RSKDTDALIETIDSG----------GVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKG- 69 (121)
Q Consensus 4 ~~~~~~l~~a~---~~~~~~~v~~ll~~~----------~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~- 69 (121)
..+.++++.|+ ..|+.+.+..|+... ....+..|..|.||||+|+..|+.+++++|++.|++++..
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 123 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQA 123 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccc
Confidence 45788999999 678887776666541 1334455668999999999999999999999999988744
Q ss_pred ---------------CCccHHHHHHHhCCHHHHHHHHH---cCCCCCccCcCCCCHHHHHHhh
Q psy15272 70 ---------------QRSSSLHYAACFGRPSVAKVLLR---HGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 70 ---------------~g~t~l~~a~~~~~~~~~~~L~~---~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|++.
T Consensus 124 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~ 186 (260)
T 3jxi_A 124 RGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAI 186 (260)
T ss_dssp EECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred cccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHh
Confidence 48999999999999999999999 9999999999999999999975
No 72
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.90 E-value=2e-23 Score=128.73 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=91.6
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
+..+.++++.|+..|+.+.+..|+ +.|.+++.. +|.||||+|+..++.+++++|++.|++++. ..|.||||+|+.
T Consensus 28 d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~ 104 (285)
T 3kea_A 28 DVHGHSASYYAIADNNVRLVCTLL-NAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVD 104 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHH-HTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHH-hCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHH
Confidence 456778899999999986665544 557787766 488999999999999999999999988763 458899999999
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCC-CCHHHHHHhh
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDG-KTPLDKARER 114 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g-~tpl~~a~~~ 114 (121)
.|+.+++++|++.|++++.++..| .||||+|+..
T Consensus 105 ~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 105 SGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVML 139 (285)
T ss_dssp TTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHT
T ss_pred cCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Confidence 999999999999999999999988 7999999887
No 73
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.90 E-value=2e-22 Score=123.30 Aligned_cols=111 Identities=27% Similarity=0.270 Sum_probs=95.2
Q ss_pred CCCchHHHHHHHHh---CChHHHHHHHHhCCCC-----------CccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy15272 3 TCWPKRQLIECIRS---KDTDALIETIDSGGVE-----------VNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK 68 (121)
Q Consensus 3 ~~~~~~~l~~a~~~---~~~~~v~~ll~~~~~~-----------~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~ 68 (121)
+..+.++|+.|+.. |+.+.+..|+.. +.+ ....|..|.||||+|+..++.+++++|++.|++++.
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~-ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDV-ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHH-HHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHh-hccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 45778899999976 888777666654 432 223567899999999999999999999999998874
Q ss_pred C----------------CCccHHHHHHHhCCHHHHHHHHH---cCCCCCccCcCCCCHHHHHHhh
Q psy15272 69 G----------------QRSSSLHYAACFGRPSVAKVLLR---HGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 69 ~----------------~g~t~l~~a~~~~~~~~~~~L~~---~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
. .|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEV 194 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHc
Confidence 3 48899999999999999999999 9999999999999999999986
No 74
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.90 E-value=3.7e-23 Score=124.16 Aligned_cols=111 Identities=23% Similarity=0.262 Sum_probs=97.7
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCC------CccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC---CCcc
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVE------VNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKG---QRSS 73 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~------~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~---~g~t 73 (121)
+..+.++++.|+..++.+.+..++ ..+.+ ++..+..|.||||+|+..++.+++++|++.|++++.. .|.|
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t 153 (236)
T 1ikn_D 75 DFRGNTPLHLACEQGCLASVGVLT-QSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRT 153 (236)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHH-HSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHH-hcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Confidence 456788999999999997766655 44543 4567788999999999999999999999999988743 6899
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 74 SLHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 74 ~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
|||+|+..++.+++++|++.|++++.+|..|.||+++|+..
T Consensus 154 pL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 154 ALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHcc
Confidence 99999999999999999999999999999999999999887
No 75
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=9.9e-23 Score=131.62 Aligned_cols=110 Identities=26% Similarity=0.310 Sum_probs=93.0
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHh
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACF 81 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~ 81 (121)
..+.++|+.|+..|+.+.|+.|+ +.|.+++..+..|.||||+|+..|+.+++++|++.|++++. ..|.||||+|+..
T Consensus 12 ~~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (437)
T 1n11_A 12 ESGLTPLHVASFMGHLPIVKNLL-QRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI 90 (437)
T ss_dssp ---CCHHHHHHHHTCHHHHHHHH-HTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHC
Confidence 45678899999999997666655 45888888888899999999999999999999999888763 4588999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 82 GRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 82 ~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
|+.+++++|++.|++++.++..|.||||+|+..
T Consensus 91 g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~ 123 (437)
T 1n11_A 91 GHTNMVKLLLENNANPNLATTAGHTPLHIAARE 123 (437)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Confidence 999999999999999999999999999999887
No 76
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.90 E-value=2.1e-23 Score=112.91 Aligned_cols=106 Identities=25% Similarity=0.291 Sum_probs=93.1
Q ss_pred CCCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHH
Q psy15272 2 QTCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAA 79 (121)
Q Consensus 2 ~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~ 79 (121)
.+..+.++++.|+..++.+.+.. |.+.+.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~-Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKK-LLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHH-HTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHH-HHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 45678899999999999966655 5566899999999999999999999999999999999998874 45899999999
Q ss_pred HhCCHHHHHHHHHcCCCCCccCcCCCCHH
Q psy15272 80 CFGRPSVAKVLLRHGANPDLRDEDGKTPL 108 (121)
Q Consensus 80 ~~~~~~~~~~L~~~~~~~~~~~~~g~tpl 108 (121)
..++.+++++|++.|++++.++..|.+|-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999884
No 77
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.90 E-value=2.4e-22 Score=123.84 Aligned_cols=111 Identities=25% Similarity=0.243 Sum_probs=98.2
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
+..+.++|+.|+..|+.+.+..|+ +.+.+++..|..|.||||+|+..|+.+++++|++.|++++. ..|.||||+|+.
T Consensus 56 ~~~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~ 134 (285)
T 3d9h_A 56 AVSDWSPMHEAAIHGHQLSLRNLI-SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACV 134 (285)
T ss_dssp SCCSCCHHHHHHHTTCHHHHHHHH-HTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH
T ss_pred CccCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 345678999999999997776655 56899999999999999999999999999999999998874 458999999999
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
.|+.+++++|++.|++++..+ .|.||||+|+..+
T Consensus 135 ~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g 168 (285)
T 3d9h_A 135 SGSWDCVNLLLQHGASVQPES-DLASPIHEAARRG 168 (285)
T ss_dssp HTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHT
T ss_pred cCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcC
Confidence 999999999999999998755 5999999999883
No 78
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=3.7e-22 Score=122.10 Aligned_cols=112 Identities=25% Similarity=0.257 Sum_probs=102.5
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCC----HHHHHHHHHcCCCCCC--CCCccHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGT----QEMVEFLCERGADVNK--GQRSSSLH 76 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~l~~~~~~~~~--~~g~t~l~ 76 (121)
+..+.++++.|+..++.+.+..++...+.+++..+..|.||+|+|+..+. .+++++|++.|++++. ..|.||||
T Consensus 145 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~ 224 (285)
T 1wdy_A 145 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 224 (285)
T ss_dssp TCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 34567899999999999888887777799999999999999999999999 8999999999998874 45899999
Q ss_pred HHHHhCCHHHHHHHHH-cCCCCCccCcCCCCHHHHHHhh
Q psy15272 77 YAACFGRPSVAKVLLR-HGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 77 ~a~~~~~~~~~~~L~~-~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+|+..++.+++++|++ .|++++.+|..|.|||++|++.
T Consensus 225 ~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~ 263 (285)
T 1wdy_A 225 LAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL 263 (285)
T ss_dssp HHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHc
Confidence 9999999999999999 7999999999999999999988
No 79
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=2.9e-22 Score=122.59 Aligned_cols=109 Identities=28% Similarity=0.361 Sum_probs=98.1
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCccc-cCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhC
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNFM-DDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFG 82 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~-~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~ 82 (121)
+.++++.|+..|+.+.+..++ +.+.+++.. +..|.||||+|+..|+.+++++|++.|++++. ..|.||||+|+..|
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHH-HcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 567899999999997776655 557888876 78899999999999999999999999998774 45899999999999
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
+.+++++|++.|++++.++..|.|||++|+..+
T Consensus 84 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 116 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG 116 (285)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCCCccCcccCCHHHHHHHhC
Confidence 999999999999999999999999999999873
No 80
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=4.3e-22 Score=104.08 Aligned_cols=90 Identities=34% Similarity=0.415 Sum_probs=74.7
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCC
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGR 83 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~ 83 (121)
+.++++.|+..++.+.+.. |.+.+.+++.+|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..++
T Consensus 2 g~t~L~~A~~~~~~~~v~~-Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKL-LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHH-HHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 4578889999998865554 5566888998899999999999999999999999999888764 448899999999999
Q ss_pred HHHHHHHHHcCCC
Q psy15272 84 PSVAKVLLRHGAN 96 (121)
Q Consensus 84 ~~~~~~L~~~~~~ 96 (121)
.+++++|++.|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999988864
No 81
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.89 E-value=4.2e-23 Score=127.28 Aligned_cols=110 Identities=13% Similarity=0.079 Sum_probs=77.5
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCC-chHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCccHHHHHHHh
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVG-QTLLNWASAFGTQEMVEFLCERGADVNKG-QRSSSLHYAACF 81 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~-~~~l~~a~~~~~~~~~~~l~~~~~~~~~~-~g~t~l~~a~~~ 81 (121)
..+.++++.|+..|+.+.+..|+ +.|.+++..+..| .||||+|+..++.+++++|++.|.+..+. .|.||||+|+..
T Consensus 93 ~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~ 171 (285)
T 3kea_A 93 DKGNTALYYAVDSGNMQTVKLFV-KKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKN 171 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHH-HHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHH-hcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHc
Confidence 44566677777777765544433 3366777667666 57777777777777777777777665443 567778888777
Q ss_pred CCHHHHHHHHHcCCCCCccCcCCCCH-HHHHHhh
Q psy15272 82 GRPSVAKVLLRHGANPDLRDEDGKTP-LDKARER 114 (121)
Q Consensus 82 ~~~~~~~~L~~~~~~~~~~~~~g~tp-l~~a~~~ 114 (121)
|+.+++++|++.|++++.++..|.|| ||+|+..
T Consensus 172 g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~ 205 (285)
T 3kea_A 172 GHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDN 205 (285)
T ss_dssp TCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHH
T ss_pred ChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHc
Confidence 88888888888888888888888776 8887776
No 82
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.89 E-value=8.3e-22 Score=118.03 Aligned_cols=110 Identities=25% Similarity=0.384 Sum_probs=79.4
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCccHHHHHHH
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK---GQRSSSLHYAAC 80 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~---~~g~t~l~~a~~ 80 (121)
..+.++++.|+..|+.+.++.++ +.+.+++..+..|.||||+|+..++.+++++|++.|.++.. ..|.||||+|+.
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 85 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELV-EAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR 85 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH
T ss_pred cccchHHHHHHHcCChHHHHHHH-HcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH
Confidence 45566677777777776655544 44677777777777888888887778887777777766542 236677777777
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.++.+++++|++.|++++.++..|.|||++|+..
T Consensus 86 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 119 (240)
T 3eu9_A 86 QGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQF 119 (240)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 7777777777777777777777777777777766
No 83
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=2.3e-22 Score=105.14 Aligned_cols=77 Identities=40% Similarity=0.546 Sum_probs=70.8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 39 VGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 39 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
+|+||||+|+..++.+++++|++.|++++. ..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 478999999999999999999999998874 45899999999999999999999999999999999999999999883
No 84
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.89 E-value=4.1e-22 Score=126.88 Aligned_cols=112 Identities=19% Similarity=0.247 Sum_probs=92.3
Q ss_pred CCCchHHHHHHHHhCC--hHHHHHHHHhCCCCCcc--------ccCCCchHHHHHHHcCCHHHHHHHHHcC-CCCC--CC
Q psy15272 3 TCWPKRQLIECIRSKD--TDALIETIDSGGVEVNF--------MDDVGQTLLNWASAFGTQEMVEFLCERG-ADVN--KG 69 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~--~~~v~~ll~~~~~~~~~--------~~~~~~~~l~~a~~~~~~~~~~~l~~~~-~~~~--~~ 69 (121)
+..+.++++.|+..+. ...+.++|.+.+.+++. .|..|.||||+|+..++.+++++|++.+ .+++ +.
T Consensus 232 d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~ 311 (373)
T 2fo1_E 232 DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDE 311 (373)
T ss_dssp CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCT
T ss_pred CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCC
Confidence 3566788888888873 33555666666888775 5667899999999999999999999765 7766 44
Q ss_pred CCccHHHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 70 QRSSSLHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 70 ~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.|.||||+|+..|+.+++++|++.|++++.+|..|.|||++|+..
T Consensus 312 ~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~ 356 (373)
T 2fo1_E 312 DGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQAN 356 (373)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHc
Confidence 588999999999999999999999999999999999999999888
No 85
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.88 E-value=7.4e-23 Score=123.34 Aligned_cols=108 Identities=26% Similarity=0.288 Sum_probs=71.3
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCccHHHHHHHhC
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN--KGQRSSSLHYAACFG 82 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~--~~~g~t~l~~a~~~~ 82 (121)
.+.++++.|+..++.+.+.. +...|.+++. +..+.||||.|+..|+.++++.|++.|++++ +..|.||||+|+..|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~-ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSE-RIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred cccccCchhhhhhhHHHHHH-HhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 46788999999998866655 4466888875 4678999999999999999999999998877 445899999999999
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+.+++++|++.|++++.+|..|.||||+|+..
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~ 113 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASC 113 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 99999999999999999999999999999987
No 86
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.88 E-value=5e-23 Score=129.09 Aligned_cols=112 Identities=17% Similarity=0.189 Sum_probs=76.3
Q ss_pred CCCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCC---HH------------------------
Q psy15272 2 QTCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGT---QE------------------------ 54 (121)
Q Consensus 2 ~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~---~~------------------------ 54 (121)
.+..+.++|+.|+..|+.+.|. +|.+.|++++.+|..|+||||+|+..++ .+
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~-~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpL 205 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVK-HLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTIL 205 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHH-HHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHH
Confidence 3567788899999999885554 4556688888888888888888887655 23
Q ss_pred --------------HHHHHHHc-----------------------------------------------CCCCCCCCCcc
Q psy15272 55 --------------MVEFLCER-----------------------------------------------GADVNKGQRSS 73 (121)
Q Consensus 55 --------------~~~~l~~~-----------------------------------------------~~~~~~~~g~t 73 (121)
+++.|++. +++..+..|+|
T Consensus 206 h~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~T 285 (327)
T 1sw6_A 206 HHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDT 285 (327)
T ss_dssp HHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCC
T ss_pred HHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCC
Confidence 33333322 12222344677
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 74 SLHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 74 ~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
|||+|+..|+.+++++|++.|++++.+|..|.||||+|++.
T Consensus 286 pLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 286 CLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp HHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence 77777777777777777777777777777777777777654
No 87
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.88 E-value=2e-22 Score=127.60 Aligned_cols=111 Identities=20% Similarity=0.245 Sum_probs=100.9
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCccHHHHHHHhCC
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGQRSSSLHYAACFGR 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~g~t~l~~a~~~~~ 83 (121)
..+.++|+.|+..|+.+.|..|+ +.|.+++..|..|.||||+|+..|+.+++++|++.|.+++...|.||||+|+..|+
T Consensus 18 ~~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~ 96 (364)
T 3ljn_A 18 DENMEKIHVAARKGQTDEVRRLI-ETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANK 96 (364)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCC
Confidence 45678899999999997776655 55899999999999999999999999999999999998888789999999999999
Q ss_pred HHHHHHHHHc----CCCCCc-----------------cCcCCCCHHHHHHhhc
Q psy15272 84 PSVAKVLLRH----GANPDL-----------------RDEDGKTPLDKARERV 115 (121)
Q Consensus 84 ~~~~~~L~~~----~~~~~~-----------------~~~~g~tpl~~a~~~~ 115 (121)
.+++++|++. |++++. ++..|.||||+|+..+
T Consensus 97 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g 149 (364)
T 3ljn_A 97 TDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLG 149 (364)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSC
T ss_pred HHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcC
Confidence 9999999999 888777 8999999999999883
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=1.2e-22 Score=118.55 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=90.5
Q ss_pred HHHHHHHHhCChHHHHHHHHhCCCCCcccc-CCCchHHHHHHHcCCH----HHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 8 RQLIECIRSKDTDALIETIDSGGVEVNFMD-DVGQTLLNWASAFGTQ----EMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 8 ~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~-~~~~~~l~~a~~~~~~----~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
++++.|+..|+.+.+..++... ++..+ ..|+||||+|+..++. +++++|++.|++++. ..|+||||+|+.
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~---~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~ 84 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKG---YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQ 84 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHS---SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcC---cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 5689999999999998877663 44455 7799999999999875 489999999999884 458999999999
Q ss_pred hCC------HHHHHHHHHcCCCCCccCcCCC-CHHHHHHhh
Q psy15272 81 FGR------PSVAKVLLRHGANPDLRDEDGK-TPLDKARER 114 (121)
Q Consensus 81 ~~~------~~~~~~L~~~~~~~~~~~~~g~-tpl~~a~~~ 114 (121)
.++ .+++++|++.|++++.+|..|. ||||+|+..
T Consensus 85 ~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~ 125 (186)
T 3t8k_A 85 GGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNY 125 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGC
T ss_pred cCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHc
Confidence 887 5789999999999999999999 999999873
No 89
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.88 E-value=1.5e-21 Score=122.52 Aligned_cols=110 Identities=24% Similarity=0.257 Sum_probs=98.2
Q ss_pred CCchHHHHHHHHhCC--hHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHH
Q psy15272 4 CWPKRQLIECIRSKD--TDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAA 79 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~--~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~ 79 (121)
..+.++++.|+..++ ...+.++|.+.+.+++..+..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+
T Consensus 209 ~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~ 288 (351)
T 3utm_A 209 QSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAA 288 (351)
T ss_dssp TTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 455688899998843 34677778888999999999999999999999999999999999998874 45899999999
Q ss_pred HhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHh
Q psy15272 80 CFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARE 113 (121)
Q Consensus 80 ~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~ 113 (121)
..|+.+++++|++.|++++.+|..|.||+++|..
T Consensus 289 ~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 289 LAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNE 322 (351)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSCH
T ss_pred HcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhhH
Confidence 9999999999999999999999999999998754
No 90
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.87 E-value=3.8e-21 Score=120.71 Aligned_cols=110 Identities=25% Similarity=0.273 Sum_probs=91.7
Q ss_pred CchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCC----HHHHHHHHHcCCCCCC--CCCccHHHHH
Q psy15272 5 WPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGT----QEMVEFLCERGADVNK--GQRSSSLHYA 78 (121)
Q Consensus 5 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~l~~~~~~~~~--~~g~t~l~~a 78 (121)
.+.++|+.|+..|+.+.|+.||.+.|.+++..|..|.++++.++..+. ..+++.|++.|++++. ..|.||||+|
T Consensus 167 ~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a 246 (337)
T 4g8k_A 167 GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILA 246 (337)
T ss_dssp CSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHH
T ss_pred CCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 456789999999999888887778889999889999999887776543 3477888899888774 4488999999
Q ss_pred HHhCCHHHHHHHHHc-CCCCCccCcCCCCHHHHHHhh
Q psy15272 79 ACFGRPSVAKVLLRH-GANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 79 ~~~~~~~~~~~L~~~-~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+..++.++++.|+.. |++++.+|..|.||||+|++.
T Consensus 247 ~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~ 283 (337)
T 4g8k_A 247 VEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL 283 (337)
T ss_dssp HHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHT
T ss_pred HHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHc
Confidence 999999999988876 789999999999999999887
No 91
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.87 E-value=4.2e-22 Score=124.89 Aligned_cols=102 Identities=19% Similarity=0.178 Sum_probs=85.5
Q ss_pred HHHHhCChHHHHHHHHhCCCCCcc-ccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCC---HH
Q psy15272 12 ECIRSKDTDALIETIDSGGVEVNF-MDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGR---PS 85 (121)
Q Consensus 12 ~a~~~~~~~~v~~ll~~~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~---~~ 85 (121)
.++..+..+.+.++|...|.+++. .|..|+||||+|+..|+.+++++|++.|++++. ..|+||||+|+..|+ .+
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~ 181 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSG 181 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTT
T ss_pred HHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHH
Confidence 444445566888888899999999 899999999999999999999999999998874 458999999999887 56
Q ss_pred HHHHHHHcC-CCCCccCcCCCCHHHHHHh
Q psy15272 86 VAKVLLRHG-ANPDLRDEDGKTPLDKARE 113 (121)
Q Consensus 86 ~~~~L~~~~-~~~~~~~~~g~tpl~~a~~ 113 (121)
+++.|++.+ ++++.+|..|.||||+|++
T Consensus 182 ~~~~ll~~~~~~~~~~d~~g~tpLh~A~~ 210 (327)
T 1sw6_A 182 TFEALLDYLYPCLILEDSMNRTILHHIII 210 (327)
T ss_dssp CHHHHHHHHGGGGGEECTTCCCHHHHHHH
T ss_pred HHHHHHHhhhccccCCCCCCCCHHHHHHH
Confidence 677777775 6788888888999998876
No 92
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.86 E-value=5.7e-22 Score=112.48 Aligned_cols=107 Identities=16% Similarity=0.124 Sum_probs=78.1
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCch-HHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQT-LLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAA 79 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~-~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~ 79 (121)
+..+.++++.| ..++.+.+ ++|.+.|.+++..|..|.| |||+|+..++.+++++|++.|++++. ..|.||||+|+
T Consensus 42 ~~~g~t~L~~A-~~~~~~~v-~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 119 (156)
T 1bi7_B 42 NSYGRRPIQVM-MMGSARVA-ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAE 119 (156)
T ss_dssp CSSSCCTTTSS-CTTCHHHH-HHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHH
T ss_pred CCCCCCHHHHH-HcCCHHHH-HHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 34567778777 47777554 5566779999999999999 99999999999999999999998874 45899999999
Q ss_pred HhCCHHHHHHHHHcCCCCCccCcCCCCHHHHH
Q psy15272 80 CFGRPSVAKVLLRHGANPDLRDEDGKTPLDKA 111 (121)
Q Consensus 80 ~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a 111 (121)
..++.+++++|++.|++++.++..|.||..-+
T Consensus 120 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 120 ELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHTCHHHHHHHSSCC-----------------
T ss_pred HhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 99999999999999999999999999997743
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=6e-22 Score=123.09 Aligned_cols=105 Identities=16% Similarity=0.144 Sum_probs=87.5
Q ss_pred CCCchHHHHHHHHh---CChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHH
Q psy15272 3 TCWPKRQLIECIRS---KDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHY 77 (121)
Q Consensus 3 ~~~~~~~l~~a~~~---~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~ 77 (121)
+..+.++|+.|+.. ++.+ +.++|.+.|.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.|||++
T Consensus 187 ~~~g~t~Lh~A~~~~~~~~~~-iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~ 265 (301)
T 2b0o_E 187 QAPEELVLHLAVKVANQASLP-LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI 265 (301)
T ss_dssp CSCEECHHHHHHHTCCTTTHH-HHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHH
T ss_pred CCCCccHHHHHHHhcccCcHH-HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 45677899999987 6675 45556666999999999999999999999999999999999998874 458999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 78 AACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 78 a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
|+..++.+++++|++.|++ .|.||||+|++.
T Consensus 266 A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~ 296 (301)
T 2b0o_E 266 ARKKHHKECEELLEQAQAG------TFAFPLHVDYSW 296 (301)
T ss_dssp HHHHTCHHHHHHHHHHHHH------TTSSCCC-----
T ss_pred HHHcCCHHHHHHHHHhcCC------CCCChhHHHHhc
Confidence 9999999999999998875 578999999988
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=3e-21 Score=107.28 Aligned_cols=84 Identities=32% Similarity=0.451 Sum_probs=76.1
Q ss_pred CCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCH
Q psy15272 30 GVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRPSVAKVLLRHGANPDLRDEDGKTP 107 (121)
Q Consensus 30 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tp 107 (121)
|.++ .+|..|.||||+|+..++.+++++|++.|.+++. ..|.||||+|+..++.+++++|++.|++++.++..|.||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 4566 6789999999999999999999999999988874 458999999999999999999999999999999999999
Q ss_pred HHHHHhh
Q psy15272 108 LDKARER 114 (121)
Q Consensus 108 l~~a~~~ 114 (121)
||+|+..
T Consensus 80 L~~A~~~ 86 (137)
T 3c5r_A 80 LHDAAKN 86 (137)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9999987
No 95
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.86 E-value=1.2e-21 Score=124.69 Aligned_cols=112 Identities=22% Similarity=0.181 Sum_probs=101.2
Q ss_pred CCchHHHHHHHHhCChHHHHHHH-------HhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccH
Q psy15272 4 CWPKRQLIECIRSKDTDALIETI-------DSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSS 74 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll-------~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~ 74 (121)
..+.++|+.|+..|+.+.+..++ .+.|.+++..|..|.||||+|+..|+.+++++|++.|++++. ..|.||
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 202 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA 202 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCH
Confidence 46789999999999987666555 378999999999999999999999999999999999998874 458999
Q ss_pred HHHHHHhCCHHHHHHHHHcC---CCCCccCcCCCCHHHHHHhhc
Q psy15272 75 LHYAACFGRPSVAKVLLRHG---ANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 75 l~~a~~~~~~~~~~~L~~~~---~~~~~~~~~g~tpl~~a~~~~ 115 (121)
||+|+..|+.+++++|++.+ ++++.++..|.||||+|+..+
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~ 246 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNE 246 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSC
T ss_pred HHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhC
Confidence 99999999999999999997 899999999999999998863
No 96
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.86 E-value=5.1e-20 Score=110.24 Aligned_cols=110 Identities=33% Similarity=0.396 Sum_probs=87.2
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccc-cCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFM-DDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~-~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
..+.++++.|+..|+.+.+..++ +.+.+++.. +..|.||||+|+..++.+++++|++.|.+++. ..|.||||+|+.
T Consensus 40 ~~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 118 (240)
T 3eu9_A 40 KENVTLLHWAAINNRIDLVKYYI-SKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQ 118 (240)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHhCCHHHHHHHH-HcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 45667888888888886665544 456666543 45588899999999999999998888887763 447889999998
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
.++.+++++|++.|++++.++..|.||+++|+..
T Consensus 119 ~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 119 FGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYR 152 (240)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred cCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Confidence 8888999999988888888888888998888865
No 97
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.85 E-value=6.7e-21 Score=102.42 Aligned_cols=83 Identities=33% Similarity=0.334 Sum_probs=70.6
Q ss_pred CccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHH
Q psy15272 33 VNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDK 110 (121)
Q Consensus 33 ~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~ 110 (121)
+...+..|.++||+|+..++.+++++|++.|++++. ..|.||||+|+..++.+++++|++.|++++.+|..|.|||++
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 345678889999999999999999999999988764 458899999999999999999999999999999999999999
Q ss_pred HHhhc
Q psy15272 111 ARERV 115 (121)
Q Consensus 111 a~~~~ 115 (121)
|+..+
T Consensus 97 A~~~~ 101 (110)
T 2zgd_A 97 SIDNG 101 (110)
T ss_dssp HHHHT
T ss_pred HHHcC
Confidence 99873
No 98
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.85 E-value=3.6e-20 Score=116.26 Aligned_cols=108 Identities=28% Similarity=0.374 Sum_probs=96.5
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCCccccC-CCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhC
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEVNFMDD-VGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFG 82 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~ 82 (121)
+.++|+.|+.+|+.+.|+.|| +.|++++.++. .|+||||+|+..|+.+++++|++.|++++. ..+.++++.+...+
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL-~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CChHHHHHHHcCCHHHHHHHH-HCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 466799999999997776665 55899998775 589999999999999999999999998874 44789999999999
Q ss_pred CHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 83 RPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 83 ~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
....+..++..+++++.++..|.||+++|+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~ 135 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 135 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHT
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHc
Confidence 99999999999999999999999999999987
No 99
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.84 E-value=6.3e-21 Score=105.95 Aligned_cols=85 Identities=28% Similarity=0.340 Sum_probs=78.7
Q ss_pred CCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCHHHHHHHHHcCCCCCccCcC-CCC
Q psy15272 30 GVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRPSVAKVLLRHGANPDLRDED-GKT 106 (121)
Q Consensus 30 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~-g~t 106 (121)
+.+++..+..|.||||+|+..++.+++++|++.|.+++. ..|.||||+|+. ++.+++++|++.|++++.++.. |.|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 457888899999999999999999999999999988874 458999999999 9999999999999999999999 999
Q ss_pred HHHHHHhhc
Q psy15272 107 PLDKARERV 115 (121)
Q Consensus 107 pl~~a~~~~ 115 (121)
|||+|+..+
T Consensus 81 ~L~~A~~~~ 89 (136)
T 1d9s_A 81 PVHDAAREG 89 (136)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999999883
No 100
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.83 E-value=1.4e-21 Score=117.27 Aligned_cols=95 Identities=17% Similarity=0.097 Sum_probs=82.8
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCccHHHHH-
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK---GQRSSSLHYA- 78 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~---~~g~t~l~~a- 78 (121)
+..+.++++.|+..|+.+.+.. |.+.|.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|
T Consensus 51 d~~g~tpLh~A~~~g~~~~v~~-Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 129 (229)
T 2vge_A 51 NEEGITALHNAICGANYSIVDF-LITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCD 129 (229)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHH-HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHH-HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHH
Confidence 4567889999999999966654 5566999999999999999999999999999999999998874 4689999999
Q ss_pred -HHhCCHHHHHHHHHcCCCCC
Q psy15272 79 -ACFGRPSVAKVLLRHGANPD 98 (121)
Q Consensus 79 -~~~~~~~~~~~L~~~~~~~~ 98 (121)
+..++.+++++|++.|++++
T Consensus 130 a~~~~~~~~v~~Ll~~ga~~~ 150 (229)
T 2vge_A 130 PYREGYADCATYLADVEQSMG 150 (229)
T ss_dssp TTSTTHHHHHHHHHHHHHHTT
T ss_pred HHhcChHHHHHHHHHcCCCcc
Confidence 99999999999998765543
No 101
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=2e-20 Score=101.10 Aligned_cols=81 Identities=36% Similarity=0.472 Sum_probs=75.4
Q ss_pred cccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHH
Q psy15272 35 FMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKAR 112 (121)
Q Consensus 35 ~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~ 112 (121)
.+|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..++.+++++|++.|++++.+|..|.|||++|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 5688999999999999999999999999988774 45899999999999999999999999999999999999999999
Q ss_pred hhc
Q psy15272 113 ERV 115 (121)
Q Consensus 113 ~~~ 115 (121)
..+
T Consensus 84 ~~~ 86 (115)
T 2l6b_A 84 KNG 86 (115)
T ss_dssp TTT
T ss_pred HCC
Confidence 873
No 102
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.82 E-value=3.2e-19 Score=99.04 Aligned_cols=91 Identities=23% Similarity=0.300 Sum_probs=80.0
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCccHHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN--KGQRSSSLHYAAC 80 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~--~~~g~t~l~~a~~ 80 (121)
+..+.++++.|+..++.+.+.. |.+.+.+++..|..|.||||+|+..++.+++++|++.|++++ +..|.||||+|+.
T Consensus 44 ~~~g~t~L~~A~~~~~~~~v~~-Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~ 122 (136)
T 2jab_A 44 DEYGLTPLYLATAHGHLEIVEV-LLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIG 122 (136)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHH-HHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHH-HHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHH
Confidence 4567889999999999966655 556699999999999999999999999999999999999886 4458999999999
Q ss_pred hCCHHHHHHHHHcC
Q psy15272 81 FGRPSVAKVLLRHG 94 (121)
Q Consensus 81 ~~~~~~~~~L~~~~ 94 (121)
.++.+++++|++.|
T Consensus 123 ~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 123 NGNEDLAEILQKLN 136 (136)
T ss_dssp TTCHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHcC
Confidence 99999999999875
No 103
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=9.9e-20 Score=99.46 Aligned_cols=79 Identities=29% Similarity=0.369 Sum_probs=71.4
Q ss_pred cCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 37 DDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 37 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+..+.+|||+|+..++.++++.|++.|.+++. ..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 46688999999999999999999999988774 4589999999999999999999999999999999999999999987
Q ss_pred c
Q psy15272 115 V 115 (121)
Q Consensus 115 ~ 115 (121)
+
T Consensus 84 ~ 84 (123)
T 3aaa_C 84 G 84 (123)
T ss_dssp T
T ss_pred C
Confidence 3
No 104
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.82 E-value=1.5e-20 Score=115.48 Aligned_cols=104 Identities=25% Similarity=0.300 Sum_probs=85.3
Q ss_pred HHHHHhCChHHHHHHHHhCCC--CCccccCCCchHHHHHHHcCCHHHHHHHHHcCC-CCC--------------------
Q psy15272 11 IECIRSKDTDALIETIDSGGV--EVNFMDDVGQTLLNWASAFGTQEMVEFLCERGA-DVN-------------------- 67 (121)
Q Consensus 11 ~~a~~~~~~~~v~~ll~~~~~--~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~-~~~-------------------- 67 (121)
+.|+..+..+.+..++.. +. .++..|..|.||||+|+..|+.+++++|++.|. +++
T Consensus 81 ~~a~~~~~~~~~~~l~~~-~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~ 159 (276)
T 4hbd_A 81 HPELVRRHLVTFRAMSAR-LLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKT 159 (276)
T ss_dssp CHHHHHHHHHHHHHHCHH-HHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCS
T ss_pred CHHHHHHHHHHHHHHHHH-HHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhh
Confidence 445566666666555543 22 267889999999999999999999999999886 332
Q ss_pred --------------------CCCCccHHHHHHHhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhhc
Q psy15272 68 --------------------KGQRSSSLHYAACFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARERV 115 (121)
Q Consensus 68 --------------------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~~ 115 (121)
+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..+
T Consensus 160 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g 227 (276)
T 4hbd_A 160 QDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHG 227 (276)
T ss_dssp HHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCC
Confidence 123779999999999999999999999999999999999999999883
No 105
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.82 E-value=7.7e-19 Score=95.83 Aligned_cols=93 Identities=33% Similarity=0.379 Sum_probs=82.2
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAAC 80 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~ 80 (121)
+..+.++++.|+..++.+.+.. |.+.+.+++..|..|.||+|+|+..++.+++++|++.|++++. ..|.||+++|+.
T Consensus 32 ~~~g~t~L~~A~~~~~~~~~~~-Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~ 110 (126)
T 1n0r_A 32 DKNGRTPLHLAARNGHLEVVKL-LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR 110 (126)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCcHHHHHH-HHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 3466789999999999966654 5566899999999999999999999999999999999998874 458999999999
Q ss_pred hCCHHHHHHHHHcCCC
Q psy15272 81 FGRPSVAKVLLRHGAN 96 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~ 96 (121)
.++.+++++|++.|++
T Consensus 111 ~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 111 NGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCHHHHHHHHHHTCC
T ss_pred cCcHHHHHHHHHcCCC
Confidence 9999999999999875
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=1.5e-19 Score=118.81 Aligned_cols=104 Identities=13% Similarity=0.080 Sum_probs=81.6
Q ss_pred CCCchHHHHHHHH---hCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHH
Q psy15272 3 TCWPKRQLIECIR---SKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHY 77 (121)
Q Consensus 3 ~~~~~~~l~~a~~---~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~ 77 (121)
+..+.++||.|+. .|+.+.+ ++|.+.|++++.+|..|+||||+|+..|+.+++++|++.|++++. ..|.||||+
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v-~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 246 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLV-DFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI 246 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHH-HHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHH
T ss_pred ccccchHHHHHHHhcccccHHHH-HHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 4467889999966 7888555 555567999999999999999999999999999999999999874 458999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCCccCcCCCCH
Q psy15272 78 AACFGRPSVAKVLLRHGANPDLRDEDGKTP 107 (121)
Q Consensus 78 a~~~~~~~~~~~L~~~~~~~~~~~~~g~tp 107 (121)
|+..|+.+++++|++.|++++.......++
T Consensus 247 A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~ 276 (497)
T 3lvq_E 247 ARKKHHKECEELLEQAQAGTFAFPLHVDYS 276 (497)
T ss_dssp HHHTTCHHHHHHHHHTCC------------
T ss_pred HHHcCCHHHHHHHHHhCCCCCCCcceeecc
Confidence 999999999999999999998854444333
No 107
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=2.2e-21 Score=123.64 Aligned_cols=107 Identities=14% Similarity=0.069 Sum_probs=87.8
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCC---CccccCCCchHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCccHHHH
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVE---VNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD-----VNKGQRSSSLHY 77 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~---~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~-----~~~~~g~t~l~~ 77 (121)
..++++.|+..|+.+.|+.++ +.+.. .+..+..+.||||+|+..|+.+++++|++.|++ +...+ .||||+
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll-~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~ 169 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLC-LLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRL 169 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHT-TC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHH-HcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHH
Confidence 458899999999997776655 44542 123455678999999999999999999999964 33333 899999
Q ss_pred HHHhCCHHHHHHHHHcCCCCCc--cCcCCCCHHHHHH-hh
Q psy15272 78 AACFGRPSVAKVLLRHGANPDL--RDEDGKTPLDKAR-ER 114 (121)
Q Consensus 78 a~~~~~~~~~~~L~~~~~~~~~--~~~~g~tpl~~a~-~~ 114 (121)
|+..|+.+++++|++.|++++. +|..|.||||+|+ ..
T Consensus 170 Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~ 209 (376)
T 2aja_A 170 AAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGR 209 (376)
T ss_dssp HHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHC
Confidence 9999999999999999999887 8889999999999 88
No 108
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=1.6e-18 Score=93.08 Aligned_cols=86 Identities=27% Similarity=0.351 Sum_probs=76.4
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHh
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACF 81 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~ 81 (121)
..+.++++.|+..|+.+.+..++ +.+.+++..|..|.||||+|+..++.+++++|++.|++++. ..|.||||+|+..
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 100 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILM-ANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDN 100 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CccchHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHc
Confidence 45678899999999997776655 56899999999999999999999999999999999998874 4589999999999
Q ss_pred CCHHHHHHH
Q psy15272 82 GRPSVAKVL 90 (121)
Q Consensus 82 ~~~~~~~~L 90 (121)
++.+++++|
T Consensus 101 ~~~~~~~~L 109 (110)
T 2zgd_A 101 GNEDLAEIL 109 (110)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHh
Confidence 999999876
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.80 E-value=5.5e-19 Score=108.71 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=82.2
Q ss_pred CCCchHHHHHHHHh---CChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHH
Q psy15272 3 TCWPKRQLIECIRS---KDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHY 77 (121)
Q Consensus 3 ~~~~~~~l~~a~~~---~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~ 77 (121)
+..+.++++.|+.. ++. .+.++|.+.|++++.+|..|.||||+|+..|+.++++.|++.|++++. ..|.||||+
T Consensus 166 ~~~g~t~Lh~A~~~~~~~~~-~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 244 (278)
T 1dcq_A 166 HEPDETALHLAVRSVDRTSL-HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 244 (278)
T ss_dssp SSTTCBHHHHHHHHCCTTTH-HHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccCCCCcchHHHHhcccchH-HHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHH
Confidence 34578899999999 666 455556666999999999999999999999999999999999998874 459999999
Q ss_pred HHHhCCHHHHHHHHHcCCCC
Q psy15272 78 AACFGRPSVAKVLLRHGANP 97 (121)
Q Consensus 78 a~~~~~~~~~~~L~~~~~~~ 97 (121)
|+..|+.+++++|++.|++.
T Consensus 245 A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 245 AKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHTTCHHHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999998753
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=3.7e-18 Score=108.56 Aligned_cols=110 Identities=22% Similarity=0.230 Sum_probs=80.4
Q ss_pred CCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCccHHHHHHHh
Q psy15272 4 CWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK--GQRSSSLHYAACF 81 (121)
Q Consensus 4 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~g~t~l~~a~~~ 81 (121)
..+.++|+.|+..++.+.+ ++|.+.|++++..|..|+||||+|+..++.+++++|++.|++++. ..|.||||+|+..
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv-~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~ 311 (368)
T 3jue_A 233 QDNATPLIQATAANSLLAC-EFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMET 311 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHH-HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cCCCCHHHHHHHCCCHHHH-HHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHC
Confidence 4677899999999998655 556667999999999999999999999999999999999998874 4589999999999
Q ss_pred CCHHHHHHHHHcC---CCCCccCcCCCCHHHHHHhh
Q psy15272 82 GRPSVAKVLLRHG---ANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 82 ~~~~~~~~L~~~~---~~~~~~~~~g~tpl~~a~~~ 114 (121)
++.+++++|+..+ .+....+..+.|+++++...
T Consensus 312 g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 312 ANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp TCHHHHHHHHHHHC----------------------
T ss_pred CCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 9999999999875 33456667788888876554
No 111
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.77 E-value=4.4e-19 Score=105.66 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=76.6
Q ss_pred CCCchHHHHHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCccHHHHHHH
Q psy15272 3 TCWPKRQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN--KGQRSSSLHYAAC 80 (121)
Q Consensus 3 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~--~~~g~t~l~~a~~ 80 (121)
+..+.++|+.|+..|+.+.+..|+...+.+++..|..|.||||+|+..++.+++++|++.|++++ +..|.|||++|+.
T Consensus 103 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 182 (222)
T 3ehr_A 103 DKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATN 182 (222)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcc
Confidence 45678899999999999777665555599999999999999999999999999999999999887 4458999999999
Q ss_pred hCCHHHHHHHHHcCCCCCccCcCCC
Q psy15272 81 FGRPSVAKVLLRHGANPDLRDEDGK 105 (121)
Q Consensus 81 ~~~~~~~~~L~~~~~~~~~~~~~g~ 105 (121)
.++.++++.|+..++....++..+.
T Consensus 183 ~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 183 AACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHHHHHHC-----------------
T ss_pred hhHHHHHHHHhccchhhhccchhhh
Confidence 9999999999999998887776554
No 112
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.77 E-value=1e-18 Score=101.40 Aligned_cols=78 Identities=26% Similarity=0.270 Sum_probs=71.4
Q ss_pred cCCCchHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCccHHHHHHHhCCHHHHHHHHHcCCCCCccC-cCCCCHHHHHHh
Q psy15272 37 DDVGQTLLNWASAFGTQEMVEFLCERGADVN--KGQRSSSLHYAACFGRPSVAKVLLRHGANPDLRD-EDGKTPLDKARE 113 (121)
Q Consensus 37 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~--~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~-~~g~tpl~~a~~ 113 (121)
+..|.||||+|+..|+.++++.|++ +.+++ +..|.||||+|+..|+.+++++|++.|++++.++ ..|.||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4578999999999999999999999 87776 4458999999999999999999999999999988 899999999998
Q ss_pred hc
Q psy15272 114 RV 115 (121)
Q Consensus 114 ~~ 115 (121)
.+
T Consensus 120 ~~ 121 (183)
T 3deo_A 120 YV 121 (183)
T ss_dssp TT
T ss_pred cC
Confidence 83
No 113
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.75 E-value=2.1e-18 Score=104.25 Aligned_cols=77 Identities=25% Similarity=0.258 Sum_probs=70.8
Q ss_pred cCCCchHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCccHHHHHHHhCCHHHHHHHHHcCCCCCccC-cCCCCHHHHHHh
Q psy15272 37 DDVGQTLLNWASAFGTQEMVEFLCERGADVN--KGQRSSSLHYAACFGRPSVAKVLLRHGANPDLRD-EDGKTPLDKARE 113 (121)
Q Consensus 37 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~--~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~-~~g~tpl~~a~~ 113 (121)
+..|.||||+|+..|+.++++.|+. |.+++ +..|.||||+|+..|+.+++++|++.|++++.++ ..|.||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 3568999999999999999999999 88776 4458999999999999999999999999999988 889999999998
Q ss_pred h
Q psy15272 114 R 114 (121)
Q Consensus 114 ~ 114 (121)
.
T Consensus 121 ~ 121 (244)
T 3ui2_A 121 Y 121 (244)
T ss_dssp T
T ss_pred c
Confidence 8
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.71 E-value=7e-19 Score=112.19 Aligned_cols=100 Identities=13% Similarity=0.041 Sum_probs=81.5
Q ss_pred chHHHHHHHHhCChHHHHHHHHhCCCCC---ccccCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC----CCCccHHHHH
Q psy15272 6 PKRQLIECIRSKDTDALIETIDSGGVEV---NFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK----GQRSSSLHYA 78 (121)
Q Consensus 6 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~---~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~----~~g~t~l~~a 78 (121)
+.++++.|+..|+.+.|+. |.+.|.++ +..+.. .||||+|+..|+.+++++|++.|++++. ..|.||||+|
T Consensus 128 ~~tpL~~Aa~~G~~eiv~~-Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~A 205 (376)
T 2aja_A 128 NYQAFRLAAENGHLHVLNR-LCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWA 205 (376)
T ss_dssp HHHHHHHHHHTTCHHHHHH-HHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHH-HHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHH
Confidence 4668999999999966655 55667552 222233 8999999999999999999999988543 3488999999
Q ss_pred H-HhCCHHHHHHHHHcCCCCCccCcCCCCHHHHHHhh
Q psy15272 79 A-CFGRPSVAKVLLRHGANPDLRDEDGKTPLDKARER 114 (121)
Q Consensus 79 ~-~~~~~~~~~~L~~~~~~~~~~~~~g~tpl~~a~~~ 114 (121)
+ ..|+.+++++|++.|+ .|.||+++|++.
T Consensus 206 a~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~ 235 (376)
T 2aja_A 206 AVGRGHHNVINFLLDCPV-------MLAYAEIHEFEY 235 (376)
T ss_dssp HSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTT
T ss_pred HHHCCCHHHHHHHHhCCC-------ccchHHHHHHHC
Confidence 9 9999999999998764 378999999988
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=50.69 E-value=14 Score=15.36 Aligned_cols=18 Identities=11% Similarity=0.158 Sum_probs=12.1
Q ss_pred HHHHHHHHhCChHHHHHH
Q psy15272 8 RQLIECIRSKDTDALIET 25 (121)
Q Consensus 8 ~~l~~a~~~~~~~~v~~l 25 (121)
..+.-|+..|+++.+..|
T Consensus 15 QqiyvA~seGd~etv~~L 32 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHH
Confidence 346667888888766554
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=38.68 E-value=87 Score=20.95 Aligned_cols=48 Identities=31% Similarity=0.402 Sum_probs=35.6
Q ss_pred HHhCChHHHHHHHHhCCCCCcc--------------ccCCCchHHHHHHHcCCHHHHHHHHHc
Q psy15272 14 IRSKDTDALIETIDSGGVEVNF--------------MDDVGQTLLNWASAFGTQEMVEFLCER 62 (121)
Q Consensus 14 ~~~~~~~~v~~ll~~~~~~~~~--------------~~~~~~~~l~~a~~~~~~~~~~~l~~~ 62 (121)
+..|+...|..++...| +++- .-..|.|.+|+|++..+.+++..|+..
T Consensus 30 v~e~~~~~ve~y~~~gg-~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGG-DIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHTCHHHHHHHHTTTC-CTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCC-chhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 46799989988886654 4421 123488999999999999988887753
No 117
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=27.14 E-value=94 Score=17.83 Aligned_cols=71 Identities=14% Similarity=0.076 Sum_probs=35.5
Q ss_pred HHHHHhCChHHHHHHHHhCCCCCccccCCCchHHHHHHHcCCH-HHHHHHHHcCCCCCCCCCccHHHHHHHhCCHHHHHH
Q psy15272 11 IECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQ-EMVEFLCERGADVNKGQRSSSLHYAACFGRPSVAKV 89 (121)
Q Consensus 11 ~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~-~~~~~l~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 89 (121)
+-....|+.+.+.++..... ....-...++.+...|.. ++++.|.+.|--+. +...|..+|..++.+-
T Consensus 68 ~Ly~~tg~~e~L~kla~iA~-----~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~e------A~~~A~t~g~~~~a~~ 136 (177)
T 3mkq_B 68 FLYLVTGDVNKLSKMQNIAQ-----TREDFGSMLLNTFYNNSTKERSSIFAEGGSLPL------AYAVAKANGDEAAASA 136 (177)
T ss_dssp HHHHHHTCHHHHHHHHHHHH-----HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHH------HHHHHHHTTCHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHH-----HCccHHHHHHHHHHcCCHHHHHHHHHHCCChHH------HHHHHHHcCcHHHHHH
Confidence 34445666666655543210 011112355555555665 46666666654322 5555555666666655
Q ss_pred HHH
Q psy15272 90 LLR 92 (121)
Q Consensus 90 L~~ 92 (121)
+++
T Consensus 137 ~~~ 139 (177)
T 3mkq_B 137 FLE 139 (177)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 118
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=20.17 E-value=2.3e+02 Score=21.79 Aligned_cols=86 Identities=6% Similarity=-0.018 Sum_probs=50.0
Q ss_pred HHHHhCChHHHHHHHHh------CCCCCccccCCCchHHHHHHHcCCHHH----HHHHHHcCCCCCCCCCccHHHHHHHh
Q psy15272 12 ECIRSKDTDALIETIDS------GGVEVNFMDDVGQTLLNWASAFGTQEM----VEFLCERGADVNKGQRSSSLHYAACF 81 (121)
Q Consensus 12 ~a~~~~~~~~v~~ll~~------~~~~~~~~~~~~~~~l~~a~~~~~~~~----~~~l~~~~~~~~~~~g~t~l~~a~~~ 81 (121)
-.++.|..+....++.. .|..++... =.+.+..-|..|..+- ++.+...|..++.....+.+...+..
T Consensus 136 glcK~G~leeA~~Lf~eM~~m~~kG~~PdvvT--YNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glcK~ 213 (1134)
T 3spa_A 136 CCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDM--YNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQ 213 (1134)
T ss_dssp HHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhH--HHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHhC
Confidence 35778888888888743 233444221 1245556677777643 34444577777644445566666666
Q ss_pred CCH-----HHHHHHHHcCCCCCc
Q psy15272 82 GRP-----SVAKVLLRHGANPDL 99 (121)
Q Consensus 82 ~~~-----~~~~~L~~~~~~~~~ 99 (121)
|.. ++++.+.+.|..++.
T Consensus 214 G~~~e~A~~Ll~EM~~kG~~PD~ 236 (1134)
T 3spa_A 214 DQDAGTIERCLEQMSQEGLKLQA 236 (1134)
T ss_dssp TCCHHHHHHHHHHHHHHTCCSHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCCh
Confidence 652 355666666776654
Done!