BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15275
(205 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332375660|gb|AEE62971.1| unknown [Dendroctonus ponderosae]
Length = 205
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 148/205 (72%), Positives = 181/205 (88%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+TYNGG+++AM G+NCVAIA D+RFG+Q LA NF+KIF++GSH+YVGLPGLATDT
Sbjct: 1 MSILTYNGGAMLAMKGENCVAIAADRRFGVQAQTLATNFEKIFEMGSHLYVGLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV +K+RFR+N+YELKENR MSP+V AM+S++LYE RFGPYFVEP+V GL+P+T EP
Sbjct: 61 QTVMEKLRFRKNIYELKENRAMSPRVFSAMVSHLLYENRFGPYFVEPVVAGLEPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC+NQP DFVVGG S QLYGMCE LWEPNL PD+LFET +QAL+NA +R+AV
Sbjct: 121 ICNMDLIGCINQPKDFVVGGTASAQLYGMCEALWEPNLTPDELFETTSQALINAFDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYIIE+DKVT++++KTRMD
Sbjct: 181 SGWGATVYIIEKDKVTIKNLKTRMD 205
>gi|270008657|gb|EFA05105.1| hypothetical protein TcasGA2_TC015205 [Tribolium castaneum]
Length = 205
Score = 332 bits (850), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 153/205 (74%), Positives = 177/205 (86%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG++VAM G CV+IA DKRFGIQ +A NFQKIF++G H+YVGLPGLATDT
Sbjct: 1 MSILAYNGGAMVAMKGDKCVSIASDKRFGIQAQTIATNFQKIFEMGPHLYVGLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV +K+RFR+NLYELKENR MSPKV AM+SNMLYE RFGP+FVEP+V GLDP T EP
Sbjct: 61 QTVMEKLRFRKNLYELKENRPMSPKVFSAMLSNMLYENRFGPFFVEPIVAGLDPGTYEPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC NQP+DFVVGG S QL+GMCE+LWEPNL PDDLFET +QAL+NA +R+A+
Sbjct: 121 ICNMDLIGCPNQPNDFVVGGTASSQLFGMCESLWEPNLGPDDLFETTSQALINAFDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVVYIIE+DKVTVR +KTRMD
Sbjct: 181 SGWGAVVYIIEKDKVTVRDLKTRMD 205
>gi|380022329|ref|XP_003695002.1| PREDICTED: proteasome subunit beta type-3-like [Apis florea]
Length = 205
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 181/205 (88%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG+I+AM GKNCVAIA D+RFGIQ + +FQKIF++GSH+Y+ LPGLATDT
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV +K+RFR NLYELKENRK+ PK +M+SN+LYERRFGPYFVEP++ GL+P T EP
Sbjct: 61 QTVMEKLRFRLNLYELKENRKIHPKAFASMVSNLLYERRFGPYFVEPIIAGLNPNTYEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC++ +DFVVGG CS+QLYGMCE+L+EP++EPDDLFETI+QALVNAC+R+A+
Sbjct: 121 ICNMDLIGCISPSNDFVVGGTCSEQLYGMCESLYEPDMEPDDLFETISQALVNACDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA+VYIIE+DK+TV+ +KTRMD
Sbjct: 181 SGWGAIVYIIEKDKITVKTLKTRMD 205
>gi|91084563|ref|XP_973600.1| PREDICTED: similar to proteasome beta 3 subunit [Tribolium
castaneum]
Length = 210
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 152/204 (74%), Positives = 176/204 (86%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SI+ YNGG++VAM G CV+IA DKRFGIQ +A NFQKIF++G H+YVGLPGLATDTQ
Sbjct: 7 SILAYNGGAMVAMKGDKCVSIASDKRFGIQAQTIATNFQKIFEMGPHLYVGLPGLATDTQ 66
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV +K+RFR+NLYELKENR MSPKV AM+SNMLYE RFGP+FVEP+V GLDP T EP I
Sbjct: 67 TVMEKLRFRKNLYELKENRPMSPKVFSAMLSNMLYENRFGPFFVEPIVAGLDPGTYEPYI 126
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
NMDLIGC NQP+DFVVGG S QL+GMCE+LWEPNL PDDLFET +QAL+NA +R+A+S
Sbjct: 127 CNMDLIGCPNQPNDFVVGGTASSQLFGMCESLWEPNLGPDDLFETTSQALINAFDRDAIS 186
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGAVVYIIE+DKVTVR +KTRMD
Sbjct: 187 GWGAVVYIIEKDKVTVRDLKTRMD 210
>gi|328785087|ref|XP_624958.3| PREDICTED: proteasome subunit beta type-3-like [Apis mellifera]
Length = 205
Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 144/205 (70%), Positives = 181/205 (88%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG+I+AM GKNCVAIA D+RFGIQ + +FQKIF++GSH+Y+ LPGLATDT
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV +K+RFR NLYELKENRK+ PK +M+SN+LYERRFGPYFVEP++ GL+P T EP
Sbjct: 61 QTVMEKLRFRLNLYELKENRKIHPKAFASMVSNLLYERRFGPYFVEPIIAGLNPNTYEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC++ +DFVVGG C++QLYGMCE+L+EP++EPDDLFETI+QALVNAC+R+A+
Sbjct: 121 ICNMDLIGCISPSNDFVVGGTCTEQLYGMCESLYEPDMEPDDLFETISQALVNACDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA+VYIIE+DK+TV+ +KTRMD
Sbjct: 181 SGWGAIVYIIEKDKITVKTLKTRMD 205
>gi|156539935|ref|XP_001599218.1| PREDICTED: proteasome subunit beta type-3-like isoform 1 [Nasonia
vitripennis]
Length = 205
Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 146/205 (71%), Positives = 179/205 (87%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG+I+AM GKNCVAIA D+RFGIQ ++ NFQKI+++G H+Y+GLPGLATD+
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTISCNFQKIYEMGPHLYLGLPGLATDS 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV +++RFR NLYELKE+R + PK +MISN+LYERRFGPYFVEP+V GLDPET EP
Sbjct: 61 QTVMERLRFRLNLYELKESRTIHPKTFGSMISNLLYERRFGPYFVEPIVAGLDPETFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC+N P DFVVGG CS+QLYGMCE L+EPNL+ DDLFETI+QALVNAC+R+A+
Sbjct: 121 ICNMDLIGCLNLPEDFVVGGTCSEQLYGMCEALYEPNLDADDLFETISQALVNACDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA+V+IIE+DK+T R +KTRMD
Sbjct: 181 SGWGAIVHIIEKDKITTRTIKTRMD 205
>gi|340724396|ref|XP_003400568.1| PREDICTED: proteasome subunit beta type-3-like [Bombus terrestris]
Length = 205
Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 179/205 (87%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG+I+AM GKNCVAIA D+RFGIQ + +FQKIF++GSH+Y+ LPGLATDT
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV +K+RFR NLYELKENRK+ PK +M+SN+LYERRFGPYFVEP++ GL P T EP
Sbjct: 61 QTVMEKLRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVEPVIAGLSPVTYEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I N+DLIGC++ +DFVVGG CS+QLYGMCE+L+EP++EPDDLFETI+QALVNAC+R+A+
Sbjct: 121 ICNVDLIGCISPSNDFVVGGTCSEQLYGMCESLFEPDMEPDDLFETISQALVNACDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA+VYIIE+DKVT R +KTRMD
Sbjct: 181 SGWGAIVYIIEKDKVTTRTIKTRMD 205
>gi|350397681|ref|XP_003484954.1| PREDICTED: proteasome subunit beta type-3-like [Bombus impatiens]
Length = 205
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 144/205 (70%), Positives = 178/205 (86%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG+I+AM GKNCVAIA D+RFGIQ + +FQKIF++GSH+Y+ LPGLATDT
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV +K+RFR NLYELKENRK+ PK +M+SN+LYERRFGPYFVEP++ GL P T EP
Sbjct: 61 QTVMEKLRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVEPVIAGLSPVTYEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ N+DLIGC++ DFVVGG CS+QLYGMCE+L+EP++EPDDLFETI+QALVNAC+R+A+
Sbjct: 121 VCNVDLIGCISPSDDFVVGGTCSEQLYGMCESLYEPDMEPDDLFETISQALVNACDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA+VYIIE+DKVT R +KTRMD
Sbjct: 181 SGWGAIVYIIEKDKVTTRTIKTRMD 205
>gi|114052162|ref|NP_001040460.1| proteasome beta 3 subunit [Bombyx mori]
gi|95102980|gb|ABF51431.1| proteasome beta 3 subunit [Bombyx mori]
Length = 205
Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 144/205 (70%), Positives = 176/205 (85%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG++VAM G++CVAIA DKRFGIQ ++ NF K+FQ+G +YVGLPGLATDT
Sbjct: 1 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV+Q+++FR NLYELKENR M PK AM+SN+LYERRFGPYF+EP++ GLDP +P
Sbjct: 61 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ NMDLIGC N+P DFVV G CS+QLYGMCE LWEPNL+PD+LFETI+QALVNA +R+A+
Sbjct: 121 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVVYIIE+DK+T +HVKTRMD
Sbjct: 181 SGWGAVVYIIEKDKITEKHVKTRMD 205
>gi|383854573|ref|XP_003702795.1| PREDICTED: proteasome subunit beta type-3-like [Megachile
rotundata]
Length = 205
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 142/205 (69%), Positives = 175/205 (85%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
M I+ YNGG+I+AM GKNCVAIA D+RFGIQ + +FQKIF++G H+Y+ LPGLATDT
Sbjct: 1 MGILDYNGGAIIAMRGKNCVAIAADRRFGIQAQTITCDFQKIFEMGPHLYMSLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV +++RFR NLYELKENRK+ PK +M+SN+LYERRFGPYFV+P++ GL P T EP
Sbjct: 61 QTVMERLRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVQPIIAGLSPVTFEPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMD+IGC+N DFVVGG CS+QLYGMCE+++EP+LE DDLFETI+QALVNAC+R+A+
Sbjct: 121 ICNMDVIGCINPSDDFVVGGTCSEQLYGMCESVFEPDLEADDLFETISQALVNACDRDAM 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVVYIIE+DKVT R +KTRMD
Sbjct: 181 SGWGAVVYIIEKDKVTTRSIKTRMD 205
>gi|322800746|gb|EFZ21650.1| hypothetical protein SINV_15015 [Solenopsis invicta]
Length = 218
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 144/205 (70%), Positives = 174/205 (84%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG+++AM GKNCVAIA D+RFGIQ + +FQKI+++G H+YV LPGLATDT
Sbjct: 14 MSILAYNGGAVIAMKGKNCVAIAADRRFGIQAQTIMCDFQKIYEMGPHLYVSLPGLATDT 73
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV +++RFR NLYELKENRK+ PK AMISN+LYE+RFGPYFVEP+V GLDP T EP
Sbjct: 74 QTVMERLRFRLNLYELKENRKIHPKTFTAMISNLLYEKRFGPYFVEPIVAGLDPVTFEPF 133
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIG N DFVVGG C++QLYGMCE+L+EPNLEP +LFET++QALVNA +R+A+
Sbjct: 134 ICNMDLIGSRNMAEDFVVGGTCTEQLYGMCESLYEPNLEPTELFETVSQALVNAFDRDAI 193
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVVYIIE+DKVT R +KTRMD
Sbjct: 194 SGWGAVVYIIEKDKVTKRTIKTRMD 218
>gi|321456221|gb|EFX67334.1| hypothetical protein DAPPUDRAFT_231791 [Daphnia pulex]
Length = 205
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 139/205 (67%), Positives = 175/205 (85%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI++YNGG ++AM GK CVAIA D+RFG+Q + LA +FQ+IF++G H+Y+GLPGLATDT
Sbjct: 1 MSILSYNGGCVLAMKGKGCVAIASDRRFGVQTSTLAMDFQRIFEMGPHLYIGLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV++++RFR NLYEL+E+RK+ P+ AM+SN+LYERRFGPYFVEP++ GLDP T EP
Sbjct: 61 LTVHERLRFRLNLYELRESRKIKPQTFSAMVSNLLYERRFGPYFVEPVIAGLDPVTWEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MDLIGC N P DFVV G C++QL+GMCE LWEPNLEPDDLFETI+QAL+NA +R+A+
Sbjct: 121 ISAMDLIGCPNMPEDFVVAGTCAEQLFGMCEALWEPNLEPDDLFETISQALMNAFDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VV+IIE+DKVT R +KTRMD
Sbjct: 181 SGWGGVVHIIEKDKVTTRMLKTRMD 205
>gi|332017819|gb|EGI58480.1| Proteasome subunit beta type-3 [Acromyrmex echinatior]
Length = 238
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 173/204 (84%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SI+ YNGG+++AM GKNCVAIA D+RFGIQ + +FQKI+++G H+YV LPGLATDTQ
Sbjct: 35 SILAYNGGAVIAMKGKNCVAIAADRRFGIQAQTITCDFQKIYEMGPHLYVSLPGLATDTQ 94
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV +++RFR NLYELKENRK+ PK AMISN+LYERRFGPYFVEP+V GLDP T EP I
Sbjct: 95 TVMERLRFRLNLYELKENRKIHPKTFTAMISNLLYERRFGPYFVEPIVAGLDPVTFEPFI 154
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
NMDLIG N DFVVGG C++QLYGMCE+L+EPNL P++LFET++QALVNA +R+A+S
Sbjct: 155 CNMDLIGSRNIAEDFVVGGTCTEQLYGMCESLYEPNLGPEELFETVSQALVNAFDRDAIS 214
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGAVVYIIE+DKVT R VKTRMD
Sbjct: 215 GWGAVVYIIEKDKVTKRTVKTRMD 238
>gi|307175918|gb|EFN65731.1| Proteasome subunit beta type-3 [Camponotus floridanus]
Length = 286
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 173/204 (84%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SI+ YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF++ H+++ LPGLATDTQ
Sbjct: 83 SILAYNGGAVIAMKGKNCVAIAADRRFGIQAQTIMCDFQKIFEMEPHLFISLPGLATDTQ 142
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV +++RFR NLYELKENRK+ PK AM+SN+LYE+RFGPYFVEP++ GLDP T EP I
Sbjct: 143 TVMERLRFRLNLYELKENRKIHPKTFTAMVSNLLYEKRFGPYFVEPIIAGLDPVTFEPFI 202
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
NMDLIG N DFVVGG C++QLYGMCE+L+EP+LEP++LFETI+QALVNA +R+A+S
Sbjct: 203 CNMDLIGSRNMAEDFVVGGTCTEQLYGMCESLYEPDLEPNELFETISQALVNAFDRDAIS 262
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGAVVYIIE+DKVT R +KTRMD
Sbjct: 263 GWGAVVYIIEKDKVTKRTIKTRMD 286
>gi|260809319|ref|XP_002599453.1| hypothetical protein BRAFLDRAFT_281217 [Branchiostoma floridae]
gi|229284732|gb|EEN55465.1| hypothetical protein BRAFLDRAFT_281217 [Branchiostoma floridae]
Length = 205
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 173/205 (84%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNG +I+AM GK+CVAIA D+RFG+Q ++ +FQKIFQ+G +++GLPGLATD
Sbjct: 1 MSIMSYNGAAIIAMVGKDCVAIAADRRFGVQAQTVSMDFQKIFQMGDRLFLGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV +++FR NLYEL+E R++ PK L+M+SN+LYERRFGPYFVEP+V GLDP+T EP
Sbjct: 61 QTVSNRMKFRLNLYELREARQVKPKTFLSMVSNLLYERRFGPYFVEPVVAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I + DLIGC P DFVV G CS+Q+YGMCE+LWEPNLEPDDLFETI+QAL+NA +R+AV
Sbjct: 121 IASCDLIGCPMIPEDFVVSGTCSEQMYGMCESLWEPNLEPDDLFETISQALLNAADRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV++IE+DKVT R +K RMD
Sbjct: 181 SGWGAVVHVIEKDKVTTRTLKGRMD 205
>gi|345497131|ref|XP_003427914.1| PREDICTED: proteasome subunit beta type-3-like isoform 2 [Nasonia
vitripennis]
Length = 192
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 137/192 (71%), Positives = 167/192 (86%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GKNCVAIA D+RFGIQ ++ NFQKI+++G H+Y+GLPGLATD+QTV +++RFR NL
Sbjct: 1 MKGKNCVAIAADRRFGIQAQTISCNFQKIYEMGPHLYLGLPGLATDSQTVMERLRFRLNL 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
YELKE+R + PK +MISN+LYERRFGPYFVEP+V GLDPET EP I NMDLIGC+N P
Sbjct: 61 YELKESRTIHPKTFGSMISNLLYERRFGPYFVEPIVAGLDPETFEPFICNMDLIGCLNLP 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DFVVGG CS+QLYGMCE L+EPNL+ DDLFETI+QALVNAC+R+A+SGWGA+V+IIE+D
Sbjct: 121 EDFVVGGTCSEQLYGMCEALYEPNLDADDLFETISQALVNACDRDAISGWGAIVHIIEKD 180
Query: 194 KVTVRHVKTRMD 205
K+T R +KTRMD
Sbjct: 181 KITTRTIKTRMD 192
>gi|312378864|gb|EFR25317.1| hypothetical protein AND_09469 [Anopheles darlingi]
Length = 205
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 172/205 (83%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG +VAM GKNCVAIA D RFG+Q +A +F+K+F++ HMY+GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TVYQ++ FR+NLYE++ENR+M+P+ AM+SN LYE+RFGPYF+EP++ GLDP+T EP
Sbjct: 61 LTVYQRLIFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKTYEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N P+DFVV G C++QLYGMCETLW+P LEPD+LFE I+QALVNA +R+A+
Sbjct: 121 ICNMDLIGCPNLPNDFVVAGTCAEQLYGMCETLWKPELEPDNLFEVISQALVNAFDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYIIE++++TV+ +KTRMD
Sbjct: 181 SGWGATVYIIEKERITVKKLKTRMD 205
>gi|156389516|ref|XP_001635037.1| predicted protein [Nematostella vectensis]
gi|156222126|gb|EDO42974.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 169/205 (82%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNG +I+AM GKNCVAIA D+R GIQ ++ +FQKIFQ+G ++VGLPGLATD
Sbjct: 1 MSIMEYNGAAIIAMVGKNCVAIAADRRLGIQAQTVSCDFQKIFQMGEKLFVGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+ +++FR NLYEL+E R + PK L+M+SN+LYERRFGPYFVEP++ GLDP+T EP
Sbjct: 61 QTISSRLKFRLNLYELREGRPIKPKTFLSMVSNLLYERRFGPYFVEPVIAGLDPKTNEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I +MDLIGC + DFVV G CS+Q+YGMCE+LW P+LEPDDLFETI+QAL+NA +R+AV
Sbjct: 121 ISSMDLIGCPMETKDFVVSGTCSEQMYGMCESLWVPDLEPDDLFETISQALLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV++IE DKVT R +K RMD
Sbjct: 181 SGWGAVVHVIEPDKVTTRTLKARMD 205
>gi|58395630|ref|XP_321394.2| AGAP001697-PA [Anopheles gambiae str. PEST]
gi|347966404|ref|XP_003435908.1| AGAP001697-PB [Anopheles gambiae str. PEST]
gi|55233656|gb|EAA00889.2| AGAP001697-PA [Anopheles gambiae str. PEST]
gi|333470074|gb|EGK97505.1| AGAP001697-PB [Anopheles gambiae str. PEST]
Length = 205
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 171/205 (83%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG +VAM GKNCVAIA D RFG+Q +A +F+K+F++ HMY+GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TVYQ++ FR+NLYE++ENR+M+P+ AM+SN LYE+RFGPYF+EP++ GLDP+T EP
Sbjct: 61 LTVYQRLLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKTYEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N P+DFVV G C++QLYGMCETLW+P+LE D LFE I+QALVNA +R+A+
Sbjct: 121 ICNMDLIGCPNLPNDFVVAGTCAEQLYGMCETLWKPDLESDSLFEVISQALVNAFDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYIIE++K+TV+ +KTRMD
Sbjct: 181 SGWGATVYIIEKEKITVKKLKTRMD 205
>gi|94468582|gb|ABF18140.1| 20S proteasome regulatory subunit beta type PSMB3/PUP3 [Aedes
aegypti]
Length = 205
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 172/205 (83%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG +VAM GKNCVAIA D RFG+Q +A +F+K+F++ HMY+GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV+Q++ FR+NLYE++ENR+M+P+ AM+SN LYE+RFGPYF+EP++ GL+P+T EP
Sbjct: 61 LTVHQRLLFRKNLYEVRENREMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLNPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N P+DFVV G C++QLYGMCETLW+P+LEP+ LFE I+QALVNA +R+A+
Sbjct: 121 ICNMDLIGCPNMPNDFVVAGTCAEQLYGMCETLWKPDLEPEKLFEVISQALVNAFDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYI+E+DK+TV+ +KTRMD
Sbjct: 181 SGWGATVYIVEKDKLTVKKLKTRMD 205
>gi|170030525|ref|XP_001843139.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
gi|167867380|gb|EDS30763.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
Length = 205
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 132/205 (64%), Positives = 172/205 (83%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG +VAM GKNCVAIA D RFG+Q +A +F+KIF++ HMY+GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKIFEINPHMYLGLVGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV+Q++ FR+NLYE++ENR+M+P+ AM+SN LYE+RFGPYF+EP++ GLDP++ EP
Sbjct: 61 LTVHQRLLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKSYEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N+P+DFVV G C++QLYGMCETLW+P+LEP LFE I+QALVNA +R+A+
Sbjct: 121 ICNMDLIGCPNKPNDFVVAGTCAEQLYGMCETLWKPDLEPTALFEVISQALVNAFDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYIIE++K+TV+ +KTRMD
Sbjct: 181 SGWGATVYIIEKEKLTVKKLKTRMD 205
>gi|157112534|ref|XP_001651824.1| proteasome subunit beta type [Aedes aegypti]
gi|108878045|gb|EAT42270.1| AAEL006174-PA [Aedes aegypti]
Length = 205
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 130/205 (63%), Positives = 172/205 (83%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG +VAM GKNCVAIA D RFG+Q +A +F+K+F++ HMY+GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV+Q++ FR+NLYE++ENR+M+P+ AM+SN LYE+RFGPYF+EP++ GL+P+T EP
Sbjct: 61 LTVHQRLLFRKNLYEVRENREMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLNPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N P+DFVV G C++QLYGMCETLW+P+LEP+ LFE I+QALVNA +R+A+
Sbjct: 121 ICNMDLIGCPNMPNDFVVAGTCAEQLYGMCETLWKPDLEPEKLFEVISQALVNAFDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYI+E++K+TV+ +KTRMD
Sbjct: 181 SGWGATVYIVEKEKLTVKKLKTRMD 205
>gi|242018983|ref|XP_002429948.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212514994|gb|EEB17210.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 190
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 131/190 (68%), Positives = 164/190 (86%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
M +++NGG++VA+TGKNCVAIA D+RFG+ ++ NFQKIF++G H+YVGLPGLATDT
Sbjct: 1 MFCLSHNGGAVVAVTGKNCVAIASDRRFGVGAQTISCNFQKIFEMGPHLYVGLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTVYQ++RFR NLYELKE RK++PK M+SN+LYERRFGPYFVEP+V GLDP T +P
Sbjct: 61 QTVYQRLRFRLNLYELKEGRKIAPKTFSHMMSNLLYERRFGPYFVEPVVAGLDPTTGKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ NMDLIGC N P DFVV G CS+QLYGMCETLWEPNLEPD+LFE ++QALVNAC+R+A+
Sbjct: 121 VCNMDLIGCPNMPEDFVVAGTCSEQLYGMCETLWEPNLEPDELFEVVSQALVNACDRDAI 180
Query: 181 SGWGAVVYII 190
SGWGA+V+++
Sbjct: 181 SGWGAIVHVM 190
>gi|443717932|gb|ELU08769.1| hypothetical protein CAPTEDRAFT_228896 [Capitella teleta]
Length = 205
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 174/205 (84%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI++YNG +IVAM GK+CVAIA D+RFGIQG +A +FQKI++ G ++Y+GLPGLATD
Sbjct: 1 MSILSYNGSAIVAMAGKDCVAIAADRRFGIQGQTVALDFQKIYEYGPNLYMGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR N+YEL+ENRKM P+ +L+++SN+LYERRFGPYFVEP++ GLDP+T++P
Sbjct: 61 QTVAQRLKFRVNMYELRENRKMKPQTMLSVVSNLLYERRFGPYFVEPVIAGLDPKTSKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFV+ G C++QLYGMCE LWEP++ PD LFE ++QA++++C+R+A+
Sbjct: 121 IASLDLIGCPMITEDFVINGTCAEQLYGMCEALWEPDMSPDVLFEKVSQAMMSSCDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VV+IIE+DKVT R +K RMD
Sbjct: 181 SGWGVVVHIIEKDKVTTRTLKARMD 205
>gi|307195647|gb|EFN77489.1| Proteasome subunit beta type-3 [Harpegnathos saltator]
Length = 192
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 137/192 (71%), Positives = 164/192 (85%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GKNCVAIA D+RFGIQ + +FQKI+++GSH+YV LPGLA+DTQTV +++RFR NL
Sbjct: 1 MKGKNCVAIAADRRFGIQAQTIMCDFQKIYEMGSHLYVSLPGLASDTQTVMERLRFRLNL 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
YELKENRK+ PK AMISN+LYERRFGPYFVEP+V GLDP T+EP I NMDLIG N
Sbjct: 61 YELKENRKIHPKTFTAMISNLLYERRFGPYFVEPIVAGLDPVTSEPFICNMDLIGSRNIA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DFVVGG C++QLYGMCE+L+EP+L P+DLFETI+QALVNA +R+A+SGWGAVVYIIE+D
Sbjct: 121 EDFVVGGTCTEQLYGMCESLYEPDLGPEDLFETISQALVNAFDRDAISGWGAVVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +KTRMD
Sbjct: 181 KVTKRTIKTRMD 192
>gi|328715258|ref|XP_001950836.2| PREDICTED: proteasome subunit beta type-3-like [Acyrthosiphon
pisum]
Length = 205
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 132/205 (64%), Positives = 166/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGG+++ M GK+CVAIA DKRFGIQ ++ +F K+FQ+ H Y+G PGLATD
Sbjct: 1 MSIMDYNGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTYMGFPGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TVY+KI FR+ LYELKENRK+SPK L +++SN+LYE RF P+FVEPM+V LD T EP
Sbjct: 61 FTVYEKIMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ +MDLIGCVN+ +FVVGG S QLYG+CE LWEP++E D LFETI+QALV+AC R+A+
Sbjct: 121 MCDMDLIGCVNKSDNFVVGGTSSSQLYGLCEALWEPDMEEDQLFETISQALVSACNRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYII++DK+ VR +KTRMD
Sbjct: 181 SGWGAKVYIIKKDKIIVRDIKTRMD 205
>gi|432957515|ref|XP_004085833.1| PREDICTED: proteasome subunit beta type-3-like [Oryzias latipes]
Length = 205
Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 170/205 (82%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP++ EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKSFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEP+LEP+DLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDLEPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV++IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|240849169|ref|NP_001155482.1| proteasome beta 3 subunit-like [Acyrthosiphon pisum]
gi|239792821|dbj|BAH72708.1| ACYPI002587 [Acyrthosiphon pisum]
Length = 205
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 166/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGG+++ M GK+CVAIA DKRFGIQ ++ +F K+FQ+ H ++G PGLATD
Sbjct: 1 MSIMDYNGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTFMGFPGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TVY+KI FR+ LYELKENRK+SPK L +++SN+LYE RF P+FVEPM+V LD T EP
Sbjct: 61 FTVYEKIMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ +MDLIGCVN+ +FVVGG S QLYG+CE LWEP++E D LFETI+QALV+AC R+A+
Sbjct: 121 MCDMDLIGCVNKSDNFVVGGTSSSQLYGLCEALWEPDMEEDQLFETISQALVSACNRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYII++DK+ VR +KTRMD
Sbjct: 181 SGWGAKVYIIKKDKIIVRDIKTRMD 205
>gi|239788580|dbj|BAH70963.1| ACYPI007526 [Acyrthosiphon pisum]
Length = 205
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 165/204 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGG+++ M GK+CVAIA DKRFGIQ ++ +F K+FQ+ H Y+G PGLATD
Sbjct: 1 MSIMDYNGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTYMGFPGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TVY+KI FR+ LYELKENRK+SPK L +++SN+LYE RF P+FVEPM+V LD T EP
Sbjct: 61 FTVYEKIMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ +MDLIGCVN+ +FVVGG S QLYG+CE LWEP++E D LFETI+QALV+AC R+A+
Sbjct: 121 MCDMDLIGCVNKSDNFVVGGTSSSQLYGLCEALWEPDMEEDQLFETISQALVSACNRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRM 204
SGWGA VYII++DK+ VR +KTRM
Sbjct: 181 SGWGAKVYIIKKDKIIVRDIKTRM 204
>gi|410917408|ref|XP_003972178.1| PREDICTED: proteasome subunit beta type-3-like [Takifugu rubripes]
Length = 205
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 170/205 (82%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC + DFVV G CS+Q+YGMCE+LW P++EP+DLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWGPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV++IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|56541012|gb|AAH87457.1| Unknown (protein for MGC:99279) [Xenopus laevis]
Length = 205
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 171/205 (83%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+I+AM GK+CVAIA D+RFG+Q + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M++N+LYERRFGPY++EP++ GLDP+T +P
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC + DFVV G CS+Q+YGMCE+LWEP++EP+DLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV++IE+DKVT R +K RMD
Sbjct: 181 SGMGVVVHVIEKDKVTTRTLKARMD 205
>gi|346469345|gb|AEO34517.1| hypothetical protein [Amblyomma maculatum]
Length = 205
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 170/205 (82%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG ++AM GK+CVAIA D+R G +G +A +FQ+IF++G +Y GLPGLATDT
Sbjct: 1 MSIMSYNGGVVLAMKGKDCVAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYEL+E RK++PK L ++ISN+LYERRFGPYFV+P+V GLDP T EP
Sbjct: 61 QTVAQRLKFRINLYELREGRKITPKTLGSVISNLLYERRFGPYFVQPVVAGLDPVTNEPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MDLIGC++ P DFVV G C +Q YGMCETLWEP++ PD+LFE AQAL+NA +R++
Sbjct: 121 ICVMDLIGCIDSPEDFVVAGTCEEQCYGMCETLWEPDMGPDELFEATAQALMNAFDRDSS 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VV++IE+DKVT +++KTRMD
Sbjct: 181 SGWGGVVHVIEKDKVTTKYLKTRMD 205
>gi|148229244|ref|NP_001088741.1| proteasome (prosome, macropain) subunit, beta type, 3 [Xenopus
laevis]
gi|56270462|gb|AAH87395.1| LOC496005 protein [Xenopus laevis]
Length = 205
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 171/205 (83%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+I+AM GK+CVAIA D+RFG+Q + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M++N+LYERRFGPY++EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC + DFVV G CS+Q+YGMCE+LWEP++EP+DLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV++IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|427787219|gb|JAA59061.1| Putative 20s proteasome regulatory subunit beta type psmb3/pup3
[Rhipicephalus pulchellus]
Length = 205
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 170/205 (82%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG +VAM GK CVAIA D+R G +G +A +F++IF++G +Y GLPGLATDT
Sbjct: 1 MSIMSYNGGVVVAMKGKECVAIAADRRLGARGHTIALDFERIFEMGPKLYCGLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYEL+E R ++PK L ++ISN+LYERRFGPYFV+P+V GLDP T EP
Sbjct: 61 QTVAQRLKFRINLYELREGRLITPKTLGSVISNLLYERRFGPYFVQPIVAGLDPVTNEPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MDLIGC+++P+DFVV G C +Q YGMCETLWEP++ PD+LFE AQAL+NA +R++
Sbjct: 121 ICVMDLIGCIDEPTDFVVSGTCEEQCYGMCETLWEPDMGPDELFEATAQALMNAFDRDSA 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VV+IIE+DKVT +++KTRMD
Sbjct: 181 SGWGGVVHIIEKDKVTTKYLKTRMD 205
>gi|62858119|ref|NP_001016503.1| proteasome beta 3 subunit [Xenopus (Silurana) tropicalis]
gi|163916422|gb|AAI57195.1| proteasome (prosome, macropain) subunit, beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 205
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 171/205 (83%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+I+AM GK+CVAIA D+RFG+Q + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M++N+LYERRFGPY++EP++ GLDP+T +P
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC + DFVV G CS+Q+YGMCE+LWEP++EP+DLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV++IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|225706352|gb|ACO09022.1| Proteasome subunit beta type 3 [Osmerus mordax]
Length = 205
Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 169/205 (82%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GK CVA+A D+RFG+Q + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKQCVAVAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYE+RFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYEKRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEP++EPDDLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPDDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV++IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|21355629|ref|NP_649858.1| proteasome beta3 subunit [Drosophila melanogaster]
gi|194903499|ref|XP_001980880.1| GG17403 [Drosophila erecta]
gi|195330532|ref|XP_002031957.1| GM26292 [Drosophila sechellia]
gi|195499293|ref|XP_002096887.1| GE24806 [Drosophila yakuba]
gi|195572401|ref|XP_002104184.1| GD20828 [Drosophila simulans]
gi|17380236|sp|Q9XYN7.1|PSB3_DROME RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome subunit beta-3
gi|4559288|gb|AAD22968.1|AF116898_1 20S proteasome beta3 subunit [Drosophila melanogaster]
gi|7299121|gb|AAF54320.1| proteasome beta3 subunit [Drosophila melanogaster]
gi|20151995|gb|AAM11357.1| LD16402p [Drosophila melanogaster]
gi|116806244|emb|CAL26545.1| CG11981 [Drosophila melanogaster]
gi|116806246|emb|CAL26546.1| CG11981 [Drosophila melanogaster]
gi|116806248|emb|CAL26547.1| CG11981 [Drosophila melanogaster]
gi|116806250|emb|CAL26548.1| CG11981 [Drosophila melanogaster]
gi|116806252|emb|CAL26549.1| CG11981 [Drosophila melanogaster]
gi|116806254|emb|CAL26550.1| CG11981 [Drosophila melanogaster]
gi|116806256|emb|CAL26551.1| CG11981 [Drosophila melanogaster]
gi|116806258|emb|CAL26552.1| CG11981 [Drosophila melanogaster]
gi|116806260|emb|CAL26553.1| CG11981 [Drosophila simulans]
gi|190652583|gb|EDV49838.1| GG17403 [Drosophila erecta]
gi|194120900|gb|EDW42943.1| GM26292 [Drosophila sechellia]
gi|194182988|gb|EDW96599.1| GE24806 [Drosophila yakuba]
gi|194200111|gb|EDX13687.1| GD20828 [Drosophila simulans]
gi|220942808|gb|ACL83947.1| Prosbeta3-PA [synthetic construct]
gi|223967619|emb|CAR93540.1| CG11981-PA [Drosophila melanogaster]
gi|223967621|emb|CAR93541.1| CG11981-PA [Drosophila melanogaster]
gi|223967623|emb|CAR93542.1| CG11981-PA [Drosophila melanogaster]
gi|223967625|emb|CAR93543.1| CG11981-PA [Drosophila melanogaster]
gi|223967627|emb|CAR93544.1| CG11981-PA [Drosophila melanogaster]
gi|223967629|emb|CAR93545.1| CG11981-PA [Drosophila melanogaster]
gi|223967631|emb|CAR93546.1| CG11981-PA [Drosophila melanogaster]
gi|223967633|emb|CAR93547.1| CG11981-PA [Drosophila melanogaster]
gi|223967635|emb|CAR93548.1| CG11981-PA [Drosophila melanogaster]
gi|223967637|emb|CAR93549.1| CG11981-PA [Drosophila melanogaster]
gi|223967639|emb|CAR93550.1| CG11981-PA [Drosophila melanogaster]
Length = 205
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 164/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG +VAM GK+CVAIA D RFGIQ ++ +F+K+F +G M++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV ++ FR+NLYE +ENR+M PK AM+S+ LYE RFGPYF+EP+V GLDP+T EP
Sbjct: 61 LTVRDRLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N P DFVV G C++QLYGMCETLW+P+LEPD LFE IAQ++VNA +R+A+
Sbjct: 121 ICNMDLIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAM 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYIIE+DK+T R +KTRMD
Sbjct: 181 SGWGATVYIIEKDKITERTLKTRMD 205
>gi|291225400|ref|XP_002732675.1| PREDICTED: proteasome beta 3 subunit-like [Saccoglossus
kowalevskii]
Length = 205
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 170/205 (82%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNG ++VAM GK+CVAIA D+RFGIQ ++ +FQKIF++G +Y+GLPGLATD
Sbjct: 1 MSIMSYNGSAVVAMKGKDCVAIAADRRFGIQAQTVSMDFQKIFEMGPRLYLGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV +++FR NLY L+ENRK+ PK ++M+SN+LYERRFGPYFVEP++ GL+P+T EP
Sbjct: 61 QTVSNRLKFRLNLYTLRENRKIKPKTFMSMVSNLLYERRFGPYFVEPIIAGLEPDTYEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC P DFVV G S+QLYGMCE+LW P++ ++LFET++QAL+NA +R+A+
Sbjct: 121 ICSLDLIGCPMVPEDFVVAGTSSEQLYGMCESLWLPDMNSEELFETVSQALLNAVDRDAL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+GWGAVV+IIE+DK+T R +K RMD
Sbjct: 181 AGWGAVVHIIEKDKITTRTLKARMD 205
>gi|185133100|ref|NP_001117722.1| proteasome subunit beta type-3 [Oncorhynchus mykiss]
gi|6093786|sp|O73817.1|PSB3_ONCMY RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|3063687|gb|AAC14141.1| proteasome subunit C10-11 [Oncorhynchus mykiss]
gi|225705904|gb|ACO08798.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GK CVAIA D+RFG+Q + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEP++EP+DLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV +IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVQVIEKDKITTRTLKARMD 205
>gi|197632283|gb|ACH70865.1| proteasome (prosome, macropain) subunit, beta type 3 [Salmo salar]
gi|209735862|gb|ACI68800.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GK CVAIA D+RFG+Q + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEP++EP+DLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V +IE+DK+T R +K RMD
Sbjct: 181 SGMGVIVQVIEKDKITTRTLKARMD 205
>gi|195395370|ref|XP_002056309.1| GJ10880 [Drosophila virilis]
gi|194143018|gb|EDW59421.1| GJ10880 [Drosophila virilis]
Length = 205
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 164/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG +VAM GK+CVAIA D RFG+Q ++ +F+K+F + M++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV ++ FR+N+YE KENR+M+PK AM+S+ LYE RFGPYF+EP+V GLDP+T +P
Sbjct: 61 LTVRDRLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N+P DFVV G C++QLYGMCETLW P+LEPD LFE IAQ++VNA +R+A+
Sbjct: 121 ICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLWRPDLEPDQLFEVIAQSMVNAFDRDAM 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYIIE+DK+T R +KTRMD
Sbjct: 181 SGWGATVYIIEKDKITERTLKTRMD 205
>gi|348521013|ref|XP_003448021.1| PREDICTED: proteasome subunit beta type-3-like [Oreochromis
niloticus]
Length = 202
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 125/202 (61%), Positives = 167/202 (82%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD QTV
Sbjct: 1 MSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP I +
Sbjct: 61 AQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICS 120
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+DLIGC DFVV G CS+Q+YGMCE+LWEP++EPDDLFETI+QA++NA +R+AVSG
Sbjct: 121 LDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPDMEPDDLFETISQAMLNAVDRDAVSGM 180
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
G VV+++E+DK+T R +K RMD
Sbjct: 181 GVVVHVVEKDKITTRTLKARMD 202
>gi|193788711|ref|NP_001123295.1| proteasome subunit beta type-3 [Danio rerio]
gi|29124577|gb|AAH49010.1| Psmb3 protein [Danio rerio]
Length = 205
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 169/205 (82%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GK CVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P+ ++M+SN+LYERRFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPRTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEP+++P+DLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMKPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV++IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|118102948|ref|XP_418119.2| PREDICTED: proteasome subunit beta type-3 [Gallus gallus]
Length = 205
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 167/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P+ ++M+SN+LYERRFGPY+ EP++ GLDP T EP
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEP++EPD LFETI+QA++NA +R+A+
Sbjct: 121 ICSLDLIGCPMITEDFVVSGTCSEQMYGMCESLWEPDMEPDHLFETISQAMLNAVDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVVVHIIEKDKITTRTLKARMD 205
>gi|326934090|ref|XP_003213128.1| PREDICTED: proteasome subunit beta type-3-like [Meleagris
gallopavo]
Length = 205
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 167/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMITTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P+ ++M+SN+LYERRFGPY+ EP++ GLDP T EP
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEP++EPD LFETI+QA++NA +R+A+
Sbjct: 121 ICSLDLIGCPMITEDFVVSGTCSEQMYGMCESLWEPDMEPDHLFETISQAMLNAVDRDAL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVVVHIIEKDKITTRTLKARMD 205
>gi|209733400|gb|ACI67569.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 167/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GK CVAIA D+RFG+Q + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEP++EP+DLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTKDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVQAIEKDKITTRTLKARMD 205
>gi|209737458|gb|ACI69598.1| Proteasome subunit beta type-3 [Salmo salar]
gi|303661230|gb|ADM16027.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GK CVAIA D+RFG+Q + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q++GMCE+LWEP++EP+DLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMHGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV +IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVQVIEKDKITTRTLKARMD 205
>gi|195038067|ref|XP_001990482.1| GH18224 [Drosophila grimshawi]
gi|193894678|gb|EDV93544.1| GH18224 [Drosophila grimshawi]
Length = 205
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 164/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG +VAM GK+CVAIA D RFG+Q ++ +F+K+F + M++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV ++ FR+N+YE KENR+M+PK AM+S+ LYE RFGPYF+EP+V GLDP+T +P
Sbjct: 61 LTVRDRLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N+P DFVV G C++QLYGMCETLW P+LEPD LFE IAQ++VNA +R+A+
Sbjct: 121 ICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLWRPDLEPDQLFEVIAQSMVNAFDRDAM 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA V+IIE+DK+T R +KTRMD
Sbjct: 181 SGWGATVFIIEKDKITERSLKTRMD 205
>gi|327275596|ref|XP_003222559.1| PREDICTED: proteasome subunit beta type-3-like [Anolis
carolinensis]
Length = 205
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 167/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +++GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLFIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P+ L++M+SN+LYERRFGPY+ EP++ GLDP T EP
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYYTEPVIAGLDPITYEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ ++DLIGC DFVV G CS+Q+YGMCE+LWEP++EPD LFETI QA++NA +R+AV
Sbjct: 121 VCSLDLIGCPMTTDDFVVSGTCSEQMYGMCESLWEPDMEPDHLFETIGQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV++IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|195111548|ref|XP_002000340.1| GI10178 [Drosophila mojavensis]
gi|193916934|gb|EDW15801.1| GI10178 [Drosophila mojavensis]
Length = 205
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 164/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG +VAM GK+CVAIA D RFG+Q ++ +F+K+F + M++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV ++ FR+N+YE KENR+M+PK AM+S+ LYE RFGPYF+EP+V GLDP+T +P
Sbjct: 61 LTVRDRLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N+P DFVV G C++QLYGMCETLW P+LEPD LFE I+Q++VNA +R+A+
Sbjct: 121 ICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLWRPDLEPDQLFEVISQSMVNAFDRDAM 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYIIE+DK+T R +KTRMD
Sbjct: 181 SGWGATVYIIEKDKITERSLKTRMD 205
>gi|225705338|gb|ACO08515.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 167/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GK CVAIA D+RFG+Q + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++ LIGC DFVV G CS+Q+YGMCE+LWEP++EP+DLFETI+QA++NA +R+AV
Sbjct: 121 IRSLGLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV +IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVQVIEKDKITTRTLKARMD 205
>gi|225705836|gb|ACO08764.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM G+ CVAIA D+RFG+Q + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGQQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEP++EP+DLFETI+QA++NA +R+A+
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV +IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVQVIEKDKITARTLKARMD 205
>gi|198423327|ref|XP_002125759.1| PREDICTED: similar to LOC496005 protein [Ciona intestinalis]
Length = 205
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 166/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG++VAM GKNCVAIA D RFGIQ + +F+KIF + +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVVAMKGKNCVAIASDLRFGIQAQTVGMDFEKIFPMSERLYIGLTGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++F+ LYEL+ENR++SPK L+++SN+LYE+RFGPYF+EP++ GLDP+T EP
Sbjct: 61 QTVSQRLQFQLKLYELRENRQISPKTFLSVVSNLLYEKRFGPYFIEPVIAGLDPKTKEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I + DLIGC +P DFVV G C+ Q+YGMCE LW P++EPDDLFE ++QAL+N+ +R+A
Sbjct: 121 IASCDLIGCPMEPEDFVVTGTCAIQMYGMCEALWRPDMEPDDLFECVSQALLNSVDRDAG 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV+IIE DKVT R +K RMD
Sbjct: 181 SGWGAVVHIIEADKVTTRRLKARMD 205
>gi|269972971|emb|CBE67030.1| CG11981-PA [Drosophila atripex]
gi|269973424|emb|CBE66639.1| CG11981-PA [Drosophila ananassae]
gi|269973426|emb|CBE66640.1| CG11981-PA [Drosophila ananassae]
gi|269973428|emb|CBE66641.1| CG11981-PA [Drosophila ananassae]
gi|269973430|emb|CBE66642.1| CG11981-PA [Drosophila ananassae]
gi|269973432|emb|CBE66643.1| CG11981-PA [Drosophila ananassae]
gi|269973434|emb|CBE66644.1| CG11981-PA [Drosophila ananassae]
gi|269973436|emb|CBE66645.1| CG11981-PA [Drosophila ananassae]
gi|269973438|emb|CBE66646.1| CG11981-PA [Drosophila ananassae]
gi|269973440|emb|CBE66647.1| CG11981-PA [Drosophila ananassae]
gi|269973442|emb|CBE66648.1| CG11981-PA [Drosophila ananassae]
gi|269973444|emb|CBE66649.1| CG11981-PA [Drosophila ananassae]
gi|269973446|emb|CBE66650.1| CG11981-PA [Drosophila ananassae]
Length = 205
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 163/205 (79%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG +VAM GK+CVAIA D RFG+Q ++ +F+K+F + M++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV ++ FR+NLYE +ENR+M+PK AM+S+ LYE RFGPYF+EP+V GLDP T +P
Sbjct: 61 LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N+P DFVV G C++QLYGMCETLW P+LEPD LFE IAQ+++NA +R+A+
Sbjct: 121 ICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLWRPDLEPDQLFEVIAQSMMNAFDRDAM 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYIIE+DK+T R +KTRMD
Sbjct: 181 SGWGATVYIIEKDKITERSLKTRMD 205
>gi|318102146|ref|NP_001188163.1| proteasome subunit beta type-3 [Ictalurus punctatus]
gi|308323613|gb|ADO28942.1| proteasome subunit beta type-3 [Ictalurus punctatus]
Length = 205
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 169/205 (82%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GK+CVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEP++ P+DLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMITEDFVVSGTCAEQMYGMCESLWEPDMGPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V++IE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|225703360|gb|ACO07526.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 167/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GK CVAIA D+RFG+Q + +FQKIF +G +++GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQVVTTDFQKIFPMGDRLHIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEP++EP+DLFETI+QA++NA R+AV
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVGRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV +IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVQVIEKDKITTRTLKARMD 205
>gi|194744578|ref|XP_001954770.1| GF18436 [Drosophila ananassae]
gi|190627807|gb|EDV43331.1| GF18436 [Drosophila ananassae]
Length = 205
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 163/205 (79%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG +VAM GK+CVAIA D RFG+Q ++ +F+K+F + M++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV ++ FR+NLYE +ENR+M+PK AM+S+ LYE RFGPYF+EP+V GLDP T +P
Sbjct: 61 LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N+P DFVV G C++QLYGMCETLW P+LEPD LFE IAQ+++NA +R+A+
Sbjct: 121 ICNMDLIGCPNEPVDFVVAGTCAEQLYGMCETLWRPDLEPDQLFEVIAQSMMNAFDRDAM 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYIIE+DK+T R +KTRMD
Sbjct: 181 SGWGATVYIIEKDKITERSLKTRMD 205
>gi|125778116|ref|XP_001359838.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|195157484|ref|XP_002019626.1| GL12496 [Drosophila persimilis]
gi|54639588|gb|EAL28990.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|194116217|gb|EDW38260.1| GL12496 [Drosophila persimilis]
Length = 205
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 165/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG +VAM GK+CVAIA D RFG+Q ++ +F+K+F + M++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV ++ FR+NLYE +ENR+M+PK AM+S+ LYE RFGPYF+EP+V GLDP+T +P
Sbjct: 61 LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTLKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ NMDLIGC N+P DFVV G C++QLYGMCETLW+P+L+PD LFE IAQ+++NA +R+A+
Sbjct: 121 VCNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLWKPDLQPDQLFEVIAQSMMNAFDRDAM 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VYIIE+DK+T R +KTRMD
Sbjct: 181 SGWGATVYIIEKDKITERSLKTRMD 205
>gi|195444118|ref|XP_002069722.1| GK11424 [Drosophila willistoni]
gi|194165807|gb|EDW80708.1| GK11424 [Drosophila willistoni]
Length = 205
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 163/205 (79%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI++YNGG +VAM GK CVAIA D RFG+Q ++ +F+K+F + M++GL GL TD
Sbjct: 1 MSILSYNGGCVVAMRGKECVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV ++ FR+NLYE +ENR+M+PK AM+S+ LYE RFGPYFVEP+V GL P+T EP
Sbjct: 61 LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFVEPVVAGLHPKTLEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N+P DFVV G C++QLYGMCETLW PNL+PD LFE I+Q++VNA +R+A+
Sbjct: 121 ICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLWRPNLDPDQLFEVISQSMVNAFDRDAM 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VY+IE+DK+T R ++TRMD
Sbjct: 181 SGWGATVYVIEKDKITERSLQTRMD 205
>gi|54696308|gb|AAV38526.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
construct]
gi|60812279|gb|AAX36205.1| proteasome subunit beta type 3 [synthetic construct]
Length = 206
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEPN++PD LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|22538465|ref|NP_002786.2| proteasome subunit beta type-3 [Homo sapiens]
gi|397477037|ref|XP_003809892.1| PREDICTED: proteasome subunit beta type-3 [Pan paniscus]
gi|20532411|sp|P49720.2|PSB3_HUMAN RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|15278174|gb|AAH13008.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Homo
sapiens]
gi|119580935|gb|EAW60531.1| proteasome (prosome, macropain) subunit, beta type, 3 [Homo
sapiens]
gi|261860656|dbj|BAI46850.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
construct]
gi|410256642|gb|JAA16288.1| proteasome (prosome, macropain) subunit, beta type, 3 [Pan
troglodytes]
Length = 205
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEPN++PD LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|338710899|ref|XP_001501618.2| PREDICTED: proteasome subunit beta type-3-like [Equus caballus]
Length = 205
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 169/205 (82%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P+ L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|328864212|gb|AEB53189.1| proteasome subunit beta type 3 [Holothuria glaberrima]
Length = 202
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 125/202 (61%), Positives = 163/202 (80%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M+YNG +IVAM GK+CVAIA D+RFGIQ ++ QKIF++ +Y+GL GLATD QTV
Sbjct: 1 MSYNGSAIVAMRGKDCVAIASDRRFGIQAQTVSMECQKIFEMAPRLYIGLSGLATDVQTV 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+++FR NLY L+ENR + PK ++M++N+LYERRFGPYF EP++ GLDP+T EP I N
Sbjct: 61 SNRLKFRLNLYTLRENRDIKPKTFMSMVANLLYERRFGPYFTEPVIAGLDPKTFEPFICN 120
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+DLIGC DFVV G C++QLYGMCE+LW+P+LEPDDLFETI+QAL+NA +R+AVSGW
Sbjct: 121 LDLIGCPMITEDFVVAGTCTEQLYGMCESLWKPDLEPDDLFETISQALLNAVDRDAVSGW 180
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
G +V++IE+DK+T R VK RMD
Sbjct: 181 GVIVHVIEKDKITTRTVKARMD 202
>gi|351706755|gb|EHB09674.1| Proteasome subunit beta type-3 [Heterocephalus glaber]
Length = 217
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 167/204 (81%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SIM+YNGG+++AM GKNCVAIA DKRFGIQ + +FQKIF +G +Y+GL GLATD Q
Sbjct: 14 SIMSYNGGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 73
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV Q+++FR NLYELKE R++ P L++M++N+LYERRFGPY+ EP++ GLDP+T +P I
Sbjct: 74 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFI 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
++DLIGC DFVV G CS+Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AVS
Sbjct: 134 CSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVS 193
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
G G VV++IE+DK+T R +K RMD
Sbjct: 194 GMGVVVHVIEKDKITTRTLKARMD 217
>gi|21465651|pdb|1IRU|J Chain J, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465665|pdb|1IRU|X Chain X, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|565647|dbj|BAA05645.1| proteasome subunit HsC10-II [Homo sapiens]
gi|1091575|prf||2021261C proteasome:SUBUNIT=HsC10-II
Length = 205
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEPN++PD LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|387017850|gb|AFJ51043.1| Proteasome subunit beta type-3-like [Crotalus adamanteus]
Length = 205
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ +A +FQKIF +G +++GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVATDFQKIFPMGDRLFIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P+ L++M+SN+LYERRFGPY+ EP++ GL+P T EP
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYYTEPVIAGLNPVTYEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEP++EPD LFETI Q+++NA +R+AV
Sbjct: 121 ICSLDLIGCPMITDDFVVSGTCTEQMYGMCESLWEPDMEPDHLFETIGQSMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V++IE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|356461018|ref|NP_001239086.1| proteasome subunit beta type-3 [Canis lupus familiaris]
gi|354474809|ref|XP_003499622.1| PREDICTED: proteasome subunit beta type-3-like [Cricetulus griseus]
Length = 205
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|426348535|ref|XP_004041889.1| PREDICTED: proteasome subunit beta type-3 [Gorilla gorilla gorilla]
Length = 205
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPHTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|395532536|ref|XP_003768326.1| PREDICTED: proteasome subunit beta type-3 [Sarcophilus harrisii]
Length = 205
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 167/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GL P+T EP
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPNTLMSMVANLLYEKRFGPYYTEPVIAGLHPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEP++EP+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPDMEPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|8394082|ref|NP_058981.1| proteasome subunit beta type-3 [Rattus norvegicus]
gi|730380|sp|P40112.1|PSB3_RAT RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|458731|dbj|BAA04824.1| proteasome subunit RC10-II [Rattus sp.]
gi|54261675|gb|AAH84723.1| Proteasome (prosome, macropain) subunit, beta type 3 [Rattus
norvegicus]
gi|149054057|gb|EDM05874.1| rCG33987, isoform CRA_a [Rattus norvegicus]
Length = 205
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS+M+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|308321183|gb|ADO27744.1| proteasome subunit beta type-3 [Ictalurus furcatus]
Length = 205
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GK+CVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++D IGC DFVV G C++Q+YGMCE+LWEP++ P+DLFETI+QA++NA +R+AV
Sbjct: 121 ICSLDQIGCPMITEDFVVSGTCAEQMYGMCESLWEPDMGPEDLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V++IE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|6755202|ref|NP_036101.1| proteasome subunit beta type-3 [Mus musculus]
gi|9910831|sp|Q9R1P1.1|PSB3_MOUSE RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|378792311|pdb|3UNB|I Chain I, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792325|pdb|3UNB|W Chain W, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792339|pdb|3UNB|KK Chain k, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792353|pdb|3UNB|YY Chain y, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792367|pdb|3UNE|I Chain I, Mouse Constitutive 20s Proteasome
gi|378792381|pdb|3UNE|W Chain W, Mouse Constitutive 20s Proteasome
gi|378792395|pdb|3UNE|KK Chain k, Mouse Constitutive 20s Proteasome
gi|378792409|pdb|3UNE|YY Chain y, Mouse Constitutive 20s Proteasome
gi|378792423|pdb|3UNF|I Chain I, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792437|pdb|3UNF|W Chain W, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792451|pdb|3UNH|I Chain I, Mouse 20s Immunoproteasome
gi|378792465|pdb|3UNH|W Chain W, Mouse 20s Immunoproteasome
gi|5757661|gb|AAD50537.1|AF060092_1 proteasome subunit C10-II [Mus musculus]
gi|12832232|dbj|BAB22017.1| unnamed protein product [Mus musculus]
gi|12845973|dbj|BAB26979.1| unnamed protein product [Mus musculus]
gi|15928628|gb|AAH14783.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
gi|68085773|gb|AAH98233.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
gi|74139857|dbj|BAE31772.1| unnamed protein product [Mus musculus]
gi|148684145|gb|EDL16092.1| mCG13231, isoform CRA_b [Mus musculus]
gi|444713978|gb|ELW54866.1| Proteasome subunit beta type-3 [Tupaia chinensis]
Length = 205
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V++IE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|77736139|ref|NP_001029768.1| proteasome subunit beta type-3 [Bos taurus]
gi|426237857|ref|XP_004012874.1| PREDICTED: proteasome subunit beta type-3 [Ovis aries]
gi|108935878|sp|P33672.3|PSB3_BOVIN RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|74354224|gb|AAI02555.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
gi|154426162|gb|AAI51436.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
gi|296476492|tpg|DAA18607.1| TPA: proteasome subunit beta type-3 [Bos taurus]
Length = 205
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|291405921|ref|XP_002719377.1| PREDICTED: proteasome beta 3 subunit [Oryctolagus cuniculus]
Length = 205
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTYKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|383873358|ref|NP_001244746.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|332258335|ref|XP_003278254.1| PREDICTED: proteasome subunit beta type-3 isoform 1 [Nomascus
leucogenys]
gi|402899980|ref|XP_003912961.1| PREDICTED: proteasome subunit beta type-3 [Papio anubis]
gi|403279415|ref|XP_003931246.1| PREDICTED: proteasome subunit beta type-3 [Saimiri boliviensis
boliviensis]
gi|355754088|gb|EHH58053.1| Proteasome subunit beta type-3 [Macaca fascicularis]
gi|380788351|gb|AFE66051.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|383414525|gb|AFH30476.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|384948330|gb|AFI37770.1| proteasome subunit beta type-3 [Macaca mulatta]
Length = 205
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|410980899|ref|XP_003996811.1| PREDICTED: proteasome subunit beta type-3 [Felis catus]
Length = 205
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V++IE+D++T R +K RMD
Sbjct: 181 SGMGVIVHVIEKDRITTRTLKARMD 205
>gi|222136592|ref|NP_001138374.1| proteasome subunit beta type-3 [Sus scrofa]
Length = 205
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYERRFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEP+++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPDMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V++IE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|392883970|gb|AFM90817.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 167/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS M+YNG +I+AM GKNCVAIA D+RFGIQ + +FQKI+ +G +Y+GL GLATD
Sbjct: 1 MSHMSYNGAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY+V+P++ GL P+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYVDPVIAGLHPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++D+IGC + DFVV G CS+Q+YGMCE+LWEP+LE +DLFETI+QA++NA +R+A+
Sbjct: 121 ICSLDVIGCPMETDDFVVSGTCSEQMYGMCESLWEPDLESEDLFETISQAMLNAVDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V++IE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|344285957|ref|XP_003414726.1| PREDICTED: proteasome subunit beta type-3-like [Loxodonta africana]
Length = 205
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 168/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEP+++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPDMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|431890707|gb|ELK01586.1| Proteasome subunit beta type-3 [Pteropus alecto]
Length = 234
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 167/204 (81%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD Q
Sbjct: 31 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 90
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P I
Sbjct: 91 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 150
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
++DLIGC DFVV G C++Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AVS
Sbjct: 151 CSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVS 210
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
G G +V+IIE+DK+T R +K RMD
Sbjct: 211 GMGVIVHIIEKDKITTRTLKARMD 234
>gi|442750507|gb|JAA67413.1| Putative 20s proteasome regulatory subunit beta type psmb3/pup3
[Ixodes ricinus]
Length = 205
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 164/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG ++AM GK C+AIA D+R G +G +A +FQ+IF++G +Y GL GLATD
Sbjct: 1 MSIMSYNGGVVIAMKGKECIAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLSGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR N+YEL+E R++ PK +++SN+LYERRFGPYF E ++ GLDP T EP
Sbjct: 61 QTVAQRLKFRINMYELREGRRIKPKTFSSVVSNILYERRFGPYFTEALIAGLDPITNEPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I + DLIGC+++P DFVV G C +Q +GMCE LWEP+L PD+LFE I+QALVNA +R+A
Sbjct: 121 IASTDLIGCISEPEDFVVSGTCEEQCFGMCEALWEPDLGPDELFEVISQALVNAFDRDAS 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VV+I+E+DKVT +++KTRMD
Sbjct: 181 SGWGGVVHIVEKDKVTTKYLKTRMD 205
>gi|440904222|gb|ELR54761.1| Proteasome subunit beta type-3, partial [Bos grunniens mutus]
Length = 205
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 167/204 (81%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD Q
Sbjct: 2 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P I
Sbjct: 62 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
++DLIGC DFVV G C++Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AVS
Sbjct: 122 CSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
G G +V+IIE+DK+T R +K RMD
Sbjct: 182 GMGVIVHIIEKDKITTRTLKARMD 205
>gi|355568453|gb|EHH24734.1| Proteasome subunit beta type-3, partial [Macaca mulatta]
Length = 204
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 167/204 (81%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD Q
Sbjct: 1 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 60
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P I
Sbjct: 61 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 120
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
++DLIGC DFVV G C++Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AVS
Sbjct: 121 CSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVS 180
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
G G +V+IIE+DK+T R +K RMD
Sbjct: 181 GMGVIVHIIEKDKITTRTLKARMD 204
>gi|301762874|ref|XP_002916854.1| PREDICTED: proteasome subunit beta type-3-like [Ailuropoda
melanoleuca]
Length = 202
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 122/202 (60%), Positives = 165/202 (81%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD QTV
Sbjct: 1 MSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
Q+++FR NLYELKE R++ P L++M++N+LYERRFGPY+ EP++ GLDP+T +P I +
Sbjct: 61 AQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICS 120
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+DLIGC DFVV G CS+Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AVSG
Sbjct: 121 LDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGM 180
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
G +V+IIE+DK+T R +K RMD
Sbjct: 181 GVIVHIIEKDKITTRTLKARMD 202
>gi|289742193|gb|ADD19844.1| 20S proteasome regulatory subunit beta type PSMB3/PUP3 [Glossina
morsitans morsitans]
Length = 205
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 164/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+TYNGG +VAM GK+CVAI D+RFG+Q ++ +F K+FQ+ M++GL GL TD
Sbjct: 1 MSILTYNGGCVVAMRGKDCVAIGTDRRFGVQAQTISTDFDKVFQMNPRMFLGLVGLQTDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV ++ FR++LYE +ENR+M P+ AM+S+ LYE RFGP+F+EP++ GLDPET EP
Sbjct: 61 LTVKDRLHFRKSLYETRENREMQPERFAAMLSSFLYEHRFGPFFIEPVIAGLDPETMEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I NMDLIGC N P DFVV G C +QLYGMCETLW+P+++ +LFETI+QA++NA +R+A+
Sbjct: 121 ICNMDLIGCPNIPDDFVVAGTCYEQLYGMCETLWKPDMKAPELFETISQAMINAFDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VY+IEQDK+T++ +KTRMD
Sbjct: 181 SGWGATVYVIEQDKITIKTLKTRMD 205
>gi|417397057|gb|JAA45562.1| Putative proteasome subunit beta type-3 [Desmodus rotundus]
Length = 205
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 167/205 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GK+CVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKDCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R + P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRPIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEP+++PD LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPDMDPDHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V++IE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|348562309|ref|XP_003466953.1| PREDICTED: proteasome subunit beta type-3-like [Cavia porcellus]
Length = 202
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 121/202 (59%), Positives = 165/202 (81%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M+YNGG+++AM GKNCVAIA DKRFGIQ + +FQKIF +G +Y+GL GLATD QTV
Sbjct: 1 MSYNGGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
Q+++FR NLYELKE R++ P L++M++N+LYERRFGPY+ EP++ GLDP+T +P I +
Sbjct: 61 AQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFQPFICS 120
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+DLIGC DFVV G C++Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AVSG
Sbjct: 121 LDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGM 180
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
G +V++IE+DK+T R +K RMD
Sbjct: 181 GVIVHVIEKDKITTRTLKARMD 202
>gi|387914628|gb|AFK10923.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 166/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS M+YNG +I+AM GKNCVAIA D+RFGIQ + +FQKI+ +G +Y+GL GLATD
Sbjct: 1 MSHMSYNGAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY+V+P++ GL P+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYVDPVIAGLHPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++D+IGC + DFVV G CS+Q+YGMCE+LWEP+LE + LFETI+QA++NA +R+A+
Sbjct: 121 ICSLDVIGCPMETDDFVVSGTCSEQMYGMCESLWEPDLESEALFETISQAMLNAVDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V++IE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|149054060|gb|EDM05877.1| rCG33987, isoform CRA_d [Rattus norvegicus]
Length = 202
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 121/202 (59%), Positives = 165/202 (81%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD QTV
Sbjct: 1 MSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P I +
Sbjct: 61 AQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICS 120
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+DLIGC DFVV G CS+Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AVSG
Sbjct: 121 LDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGM 180
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
G +V+IIE+DK+T R +K RMD
Sbjct: 181 GVIVHIIEKDKITTRTLKARMD 202
>gi|392877590|gb|AFM87627.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 166/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS M+YNG +I+AM GKNCVAIA D+RFGIQ + +FQKI+ +G +Y+GL GLATD
Sbjct: 1 MSHMSYNGAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY+V+P++ GL P+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYVDPVIAGLHPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++D+IGC + DFVV G CS+Q+YGMCE+LWEP+LE +DLFE I+QA++NA +R+A+
Sbjct: 121 ICSLDVIGCPMETDDFVVSGTCSEQMYGMCESLWEPDLESEDLFEPISQAMLNAVDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V++IE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|390346277|ref|XP_780413.3| PREDICTED: proteasome subunit beta type-3-like [Strongylocentrotus
purpuratus]
Length = 205
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 163/205 (79%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNG ++VAM GK+CV IA D+RFG+Q ++ N QKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGSAVVAMIGKDCVGIASDRRFGVQAQTVSMNAQKIFTMGPRLYLGLSGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV +++FR NLY L+ENR + P+ ++M+SN+LYERRFGPYF+EP++ GLDP+T +P
Sbjct: 61 TTVSNRLKFRLNLYTLRENRDVKPETFMSMVSNLLYERRFGPYFIEPVIAGLDPKTYKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I N+DLIGC DFVV G C++QLYGMCE++W P+L PDDLFET++Q L+NA +R+A+
Sbjct: 121 ICNLDLIGCPMFTDDFVVAGTCTEQLYGMCESVWVPDLAPDDLFETLSQGLLNAVDRDAL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+GWG VV+IIE+DKVT R VK RMD
Sbjct: 181 AGWGVVVHIIEKDKVTTREVKARMD 205
>gi|297701417|ref|XP_002827712.1| PREDICTED: proteasome subunit beta type-3 isoform 1 [Pongo abelii]
Length = 218
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 167/204 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L+++++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSLVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G C++Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRM 204
SG G +V+IIE+DK+T R +K R+
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARI 204
>gi|126308249|ref|XP_001371633.1| PREDICTED: proteasome subunit beta type-3-like [Monodelphis
domestica]
Length = 202
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 121/202 (59%), Positives = 164/202 (81%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD QTV
Sbjct: 1 MSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GL P+T EP I +
Sbjct: 61 AQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLHPKTFEPFICS 120
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+DLIGC DFVV G CS+Q+YGMCE+LWEP++EP+ LFETI+QA++NA +R+AVSG
Sbjct: 121 LDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPDMEPEHLFETISQAMLNAVDRDAVSGM 180
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
G +V+IIE+DK+T R +K RMD
Sbjct: 181 GVIVHIIEKDKITTRTLKARMD 202
>gi|47223967|emb|CAG06144.1| unnamed protein product [Tetraodon nigroviridis]
Length = 230
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 126/229 (55%), Positives = 169/229 (73%), Gaps = 25/229 (10%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD Q
Sbjct: 2 SIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQ 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP I
Sbjct: 62 TVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNL----------------------- 158
++DLIGC + DFVV G CS+Q+YGMCE+LWEP++
Sbjct: 122 CSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMVSWTFLRRSDTTMMANGFRPAAS 181
Query: 159 --EPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
E +DLFETI+QA++NA +R+AVSG G VV++IE+DK+T R +K RMD
Sbjct: 182 RQEAEDLFETISQAMLNAVDRDAVSGMGVVVHVIEKDKITTRTLKARMD 230
>gi|89272044|emb|CAJ83196.1| proteasome (prosome macropain) subunit beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 194
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 160/194 (82%)
Query: 12 VAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQ 71
+AM GK+CVAIA D+RFG+Q + +FQKIF +G +Y+GL GLATD QTV Q+++FR
Sbjct: 1 MAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKFRL 60
Query: 72 NLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVN 131
NLYELKE R++ PK ++M++N+LYERRFGPY++EP++ GLDP+T +P I ++DLIGC
Sbjct: 61 NLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDLIGCPM 120
Query: 132 QPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIE 191
+ DFVV G CS+Q+YGMCE+LWEP++EP+DLFETI+QA++NA +R+AVSG G VV++IE
Sbjct: 121 ETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAVSGMGVVVHVIE 180
Query: 192 QDKVTVRHVKTRMD 205
+DK+T R +K RMD
Sbjct: 181 KDKITTRTLKARMD 194
>gi|326426453|gb|EGD72023.1| proteasome subunit beta type-3 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 163/205 (79%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNG ++VAMTGK CVAIA D+R G Q ++ +FQK+FQ+G ++VGLPGL TD
Sbjct: 1 MSIMEYNGSAVVAMTGKECVAIAADRRLGAQAQTVSTDFQKVFQMGPKLFVGLPGLGTDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV Q+++FR N+Y L+E R + PK ++ ++S+ LYERRFGPYFVEP+V GLD + +P
Sbjct: 61 ITVSQRLKFRLNMYTLREERDIEPKTMINLVSSFLYERRFGPYFVEPVVAGLDSKN-QPY 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ + DLIGC + SDFVVGG S+QLYGMCE+L++P++ PDDLFETI+QAL+NA +R+ +
Sbjct: 120 VASTDLIGCPMETSDFVVGGTSSEQLYGMCESLYKPDMAPDDLFETISQALMNAVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+GWGA+V+IIE+DK+T R +K RMD
Sbjct: 180 AGWGAIVHIIEKDKITTRELKARMD 204
>gi|226478588|emb|CAX72789.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
gi|226478710|emb|CAX72850.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
gi|257206170|emb|CAX82736.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
Length = 205
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 162/205 (79%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ +NG +++ M+GK+C AIACD RFG+ ++ +F K++ +G +YVG PGLATD
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV+Q+++FR+N+YEL+ENR + P+ + M+SN+LYERRFGPYFVEP+V G+D T++P
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIGCV + +DFVV G C++Q+YGMCETLWE N++ +LFE I+Q ++NA R+A+
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VY+IE+D VT+ +K RMD
Sbjct: 181 SGWGARVYLIEKDAVTISDLKMRMD 205
>gi|226478644|emb|CAX72817.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
Length = 205
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 161/205 (78%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ +NG +++ M+GK+C AIACD RFG+ ++ +F K++ +G +YVG PGLATD
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q V+Q+++FR+N+YEL+ENR + P+ + M+SN+LYERRFGPYFVEP+V G+D T++P
Sbjct: 61 QIVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIGCV + +DFVV G C++Q+YGMCETLWE N++ +LFE I+Q ++NA R+A+
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VY+IE+D VT+ +K RMD
Sbjct: 181 SGWGARVYLIEKDAVTISDLKMRMD 205
>gi|148677981|gb|EDL09928.1| mCG1283 [Mus musculus]
Length = 205
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 163/205 (79%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGG+++AM GKNCVAIA D+ FGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMPYNGGAVMAMKGKNCVAIAADRCFGIQAQMVTTDFQKIFALGDRLYIGLAGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLY LKE R + P L++M++N+LYE+RFGPY+ EP++ GLDP+T +
Sbjct: 61 QTVAQRLKFRLNLYMLKEGRHIKPFTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKLF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q++GMCE+LWEP+++P+ LFETI+QA++NA +R+A+
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMHGMCESLWEPHMDPEHLFETISQAMLNAVDRDAM 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V++IE+DK+T R +K RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|256070135|ref|XP_002571401.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
gi|350646867|emb|CCD58588.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
Length = 205
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 161/205 (78%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ +NG +++AM+GK+C AIACD RFG+ ++ +F K++ +G +YVG PGLATD
Sbjct: 1 MSILAHNGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVYPLGPRLYVGFPGLATDN 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV+Q+++FR+N+YEL+EN+ + P+ + M+SN+LYERRFGPYFVEP++ G+D T +P
Sbjct: 61 QTVFQRLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIGCV + +DFVV G C++Q+YGMCETLWE N+ +LFE I+Q ++NA R+AV
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMNSKELFECISQCILNALNRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VY++E+D VT+ +K RMD
Sbjct: 181 SGWGARVYLLEKDAVTISDLKMRMD 205
>gi|391339684|ref|XP_003744177.1| PREDICTED: proteasome subunit beta type-3-like [Metaseiulus
occidentalis]
Length = 205
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 160/205 (78%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG ++AM G CVAIA D+R G++G ++ +F+++F++G ++VGLPGLATDT
Sbjct: 1 MSILAYNGGIVIAMKGDGCVAIATDRRLGVEGRTVSIDFERVFEMGPRLFVGLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TV QK+RF NLYEL+ENR+M+PK ++S LYE+RFGPYF+EP+V G+DP+T EP
Sbjct: 61 ITVSQKLRFDMNLYELQENRQMTPKTFATLLSGTLYEKRFGPYFIEPVVAGMDPKTNEPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIG + DFVV G ++ YGMCETLW P ++PD+LFE I+Q ++NA +R+A+
Sbjct: 121 VACMDLIGSTTETVDFVVSGTAEEEAYGMCETLWRPGMKPDELFECISQCVLNAMDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V+++E+DKVT R++KTRMD
Sbjct: 181 SGWGVKVHVMEKDKVTTRYLKTRMD 205
>gi|344249174|gb|EGW05278.1| Proteasome subunit beta type-3 [Cricetulus griseus]
Length = 194
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 157/194 (80%)
Query: 12 VAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQ 71
+AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD QTV Q+++FR
Sbjct: 1 MAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRL 60
Query: 72 NLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVN 131
NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P I ++DLIGC
Sbjct: 61 NLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPM 120
Query: 132 QPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIE 191
DFVV G CS+Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AVSG G +V+IIE
Sbjct: 121 VTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHIIE 180
Query: 192 QDKVTVRHVKTRMD 205
+DK+T R +K RMD
Sbjct: 181 KDKITTRTLKARMD 194
>gi|167522269|ref|XP_001745472.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775821|gb|EDQ89443.1| predicted protein [Monosiga brevicollis MX1]
Length = 211
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 162/204 (79%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SIM YNG ++VAMTGK C+AIA D+R G Q +A +FQK+FQ+G ++VGLPGLATD Q
Sbjct: 9 SIMEYNGSAMVAMTGKGCIAIAADRRLGAQAQTVATDFQKLFQMGPTLFVGLPGLATDVQ 68
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
T Q++ F+ LY+L+E R + PK L +IS+MLYE+RFGPYF+EP++ GLD + +P +
Sbjct: 69 TFSQRLTFKLKLYKLREERDIEPKALTNLISSMLYEKRFGPYFIEPLIAGLDKD-GQPYV 127
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
+ D+IGC + +DFVVGG SDQL+GMCE+L++PN+EPD+LFE ++QAL+NA +R+A++
Sbjct: 128 ASTDVIGCPMETTDFVVGGTSSDQLFGMCESLYKPNMEPDELFEVVSQALLNAQDRDALA 187
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWG VV+I+E+DKVT R ++ RMD
Sbjct: 188 GWGGVVHIVEKDKVTTRTLRGRMD 211
>gi|384501018|gb|EIE91509.1| hypothetical protein RO3G_16220 [Rhizopus delemar RA 99-880]
Length = 204
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS+VAM GK+CVAIA DKR G Q ++ FQKIF+ +GLPGLATD
Sbjct: 1 MSIMQYNGGSVVAMVGKDCVAIAADKRLGAQFMTVSTEFQKIFKATEKTLIGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + RF+ N+Y+++E R++ PK L M+S+ LYERRFGPYFVEP++ GLD +P
Sbjct: 61 ITLADRFRFKTNMYKMREEREIEPKALAHMVSSTLYERRFGPYFVEPVIAGLDKHN-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I +MDLIGC+N DFVV G LYGMCE+LWEP+LEP+DLFETI+QAL+NA +R+A+
Sbjct: 120 ICSMDLIGCINFAKDFVVSGTAGPNLYGMCESLWEPDLEPEDLFETISQALLNAQDRDAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVVYII +VTVR +K+R D
Sbjct: 180 SGWGAVVYIITSTEVTVRSLKSRQD 204
>gi|340369178|ref|XP_003383125.1| PREDICTED: proteasome subunit beta type-3-like [Amphimedon
queenslandica]
Length = 206
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 154/200 (77%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
YNG ++V M G CVAIA D+R GIQG +A F KI+ + +Y+G GLATD TV
Sbjct: 7 YNGSAVVGMIGSGCVAIAADRRLGIQGQTIATTFDKIYPMNESLYIGFYGLATDALTVSS 66
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+++++ NLY+L+ENR++ PK + M SN+LY +RFG YFVEP++ GLDP T +P I MD
Sbjct: 67 RLKYQLNLYQLRENRQIKPKAFMHMTSNLLYSKRFGYYFVEPVIAGLDPVTKDPYIATMD 126
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
LIGC + DFVV G CS+QLYGMCE+LW+P+LEP+DLFETI+QAL+NA +R+A+SGWGA
Sbjct: 127 LIGCPMETKDFVVVGTCSEQLYGMCESLWKPDLEPEDLFETISQALMNAVDRDALSGWGA 186
Query: 186 VVYIIEQDKVTVRHVKTRMD 205
+V++IE+DKVT R +K RMD
Sbjct: 187 IVHVIEKDKVTTRTLKARMD 206
>gi|34859236|ref|XP_215842.2| PREDICTED: proteasome subunit beta type-3-like [Rattus norvegicus]
gi|109470850|ref|XP_001081206.1| PREDICTED: proteasome subunit beta type-3-like [Rattus norvegicus]
Length = 205
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 160/205 (78%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+I A GKNCVAIA D+ F IQ + +FQKIF +G +Y+ L GL TD
Sbjct: 1 MSIMSYNGGAITATKGKNCVAIAADRHFRIQAQMVTTDFQKIFPMGYRLYIDLAGLGTDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q ++FR NLYELKE +++ P LL+M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQHLKFRLNLYELKEGQQIKPYTLLSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC +DFVV G CS+Q+YGMCE+LWEPN++ + LFETI+QA++NA +++A+
Sbjct: 121 ICSLDLIGCSMVTNDFVVSGTCSEQMYGMCESLWEPNVDLEHLFETISQAMLNAVDQDAM 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
S G +V+IIE+DK+T R +K +MD
Sbjct: 181 SSMGVIVHIIEKDKITTRKLKAQMD 205
>gi|281344355|gb|EFB19939.1| hypothetical protein PANDA_004975 [Ailuropoda melanoleuca]
Length = 190
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 155/189 (82%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD Q
Sbjct: 2 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV Q+++FR NLYELKE R++ P L++M++N+LYERRFGPY+ EP++ GLDP+T +P I
Sbjct: 62 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
++DLIGC DFVV G CS+Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AVS
Sbjct: 122 CSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVS 181
Query: 182 GWGAVVYII 190
G G +V+I+
Sbjct: 182 GMGVIVHIM 190
>gi|126138200|ref|XP_001385623.1| hypothetical protein PICST_62487 [Scheffersomyces stipitis CBS
6054]
gi|126092901|gb|ABN67594.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 206
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 156/201 (77%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
+ NGGS VAM GK+C+AIACD R G Q LA+NF+KIFQ G ++GL GLA+D T+
Sbjct: 6 SINGGSAVAMVGKDCIAIACDLRLGNQSLGLANNFEKIFQFGDKTFLGLTGLASDVTTLS 65
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ RF+ NLY+L+E R++ PK L ++S+ LYE+RFGPYF+ P+V GLD +T++P I
Sbjct: 66 EVFRFKNNLYKLREERQIEPKTLANLVSSTLYEKRFGPYFIGPIVAGLDSKTSKPFICGF 125
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
DLIGC++ DF+V G +DQLYGMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGWG
Sbjct: 126 DLIGCIDFAKDFIVSGTATDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGWG 185
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
A+VY++ +DKV R ++TR D
Sbjct: 186 AIVYVVTKDKVVKRVLRTRQD 206
>gi|148679117|gb|EDL11064.1| mCG13639 [Mus musculus]
Length = 205
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 160/205 (78%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM KNCVAIA D+RFGIQ + +FQKIF +G +YVGL GLA D
Sbjct: 1 MSIMSYNGGAVMAMKEKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYVGLAGLAIDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++F NLYELKE ++ P L++M++N+LYE+ FGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFLLNLYELKEGWQIKPYTLMSMVANLLYEKWFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+ +Y MCE+LWEPN++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEPMYRMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V++IE+DK+T R +K MD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKALMD 205
>gi|50419453|ref|XP_458253.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
gi|49653919|emb|CAG86329.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
Length = 206
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 155/201 (77%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
+ NGGS VAM GK+C+AIACD R G Q L++NF+KIFQ+G ++GL GLATD T+
Sbjct: 6 SINGGSAVAMVGKDCIAIACDLRLGNQSLGLSNNFEKIFQLGDKTFLGLTGLATDVITLS 65
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ RF+ NLY+L+E R++ P L ++S+ LYE+RFGPYFV P+V GLD +T +P I
Sbjct: 66 ETFRFKNNLYKLREEREIEPTTLANLVSSTLYEKRFGPYFVGPIVAGLDSKTNKPFICGF 125
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
DLIGC++ DF+V G SDQLYGMCE+L+EPNLEP+DLFETI+Q+L+NA +R+A+SGWG
Sbjct: 126 DLIGCIDFAKDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQSLLNAVDRDALSGWG 185
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
AVVYI+ +D VT R +KTR D
Sbjct: 186 AVVYIVTKDNVTKRVLKTRQD 206
>gi|340923906|gb|EGS18809.1| hypothetical protein CTHT_0054190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 206
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 155/204 (75%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GKNCVAIACD R G+Q +++NF KIFQ G H+++GL GLATD Q
Sbjct: 3 SPFSINGGACVAMVGKNCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVQ 62
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ NLY L+E R ++P+ ++S+ LYERRFGP+FV P+V GLDP+T EP I
Sbjct: 63 TVADIFRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGEPFI 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G ++QL+GMCE+LWEP+L P++LFETI+QAL+NA +R+A+S
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTATEQLFGMCESLWEPDLGPEELFETISQALLNAVDRDALS 182
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 183 GWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|366989209|ref|XP_003674372.1| hypothetical protein NCAS_0A14350 [Naumovozyma castellii CBS 4309]
gi|342300235|emb|CCC67993.1| hypothetical protein NCAS_0A14350 [Naumovozyma castellii CBS 4309]
Length = 205
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 155/199 (77%), Gaps = 1/199 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG +VAMTGK+CVAIACD R G Q +++NF+KIF G H+++GL GLATD T+ +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNNFEKIFHYG-HVFLGLTGLATDVTTLSET 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ NLY+LKE+R + P + ++S LYE+RFGPYFV P+V G++ +T +P I DL
Sbjct: 67 FRYKTNLYKLKEDRPIEPDTFIQLVSTTLYEKRFGPYFVGPVVAGINSQTEKPFIAGFDL 126
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC+++ DF+V G SDQL+GMCE+L+EPNLE +DLFETI+QAL+NA +R+A+SGWGAV
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQALLNAADRDALSGWGAV 186
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYII++DKV RH+K R D
Sbjct: 187 VYIIKKDKVVKRHLKMRQD 205
>gi|449690724|ref|XP_002160822.2| PREDICTED: proteasome subunit beta type-3-like, partial [Hydra
magnipapillata]
Length = 196
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/196 (60%), Positives = 156/196 (79%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS+M+ NG ++VAM GKNCVAIA D+R+G+Q +A +F+K FQ+G +++GL GLATD
Sbjct: 1 MSVMSINGSALVAMKGKNCVAIAADRRYGVQFQTIACDFEKTFQMGDKLFLGLSGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV F+ NLYEL+ENRK+SPKV + ++SN+LY RRFGPYFVEP++ GL P+T EP
Sbjct: 61 QTVNCFFFFKTNLYELRENRKISPKVFMTIMSNILYGRRFGPYFVEPLIAGLHPKTNEPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I + DLIGC +P DFVV G C DQLYGMCE+LWEP+LEP+ LFE I+QAL+NA +R+ +
Sbjct: 121 IASCDLIGCPCEPEDFVVSGTCGDQLYGMCESLWEPDLEPEALFEVISQALLNAQDRDCL 180
Query: 181 SGWGAVVYIIEQDKVT 196
SGWGAVV+II+ ++T
Sbjct: 181 SGWGAVVHIIDPIRLT 196
>gi|156849065|ref|XP_001647413.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
70294]
gi|156118099|gb|EDO19555.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
70294]
Length = 205
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 159/201 (79%), Gaps = 1/201 (0%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
+ NGG +VAMTGK+CVAIACD R G Q +++NF+KIF G H+++G+ GLATD T+
Sbjct: 6 SINGGIVVAMTGKDCVAIACDLRLGNQSLGVSNNFEKIFHYG-HVFLGITGLATDVLTLS 64
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
++ R++ NLY+L+E+R + P+ ++S+ LYERRFGPYFV P+V G++ ++ +P I
Sbjct: 65 EEFRYKTNLYKLREDRLIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAGF 124
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
DLIGC+++ DF+V G SDQL+GMCE+L+EPNLE +DLFETI+QAL+NA +R+A+SGWG
Sbjct: 125 DLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQALLNAADRDALSGWG 184
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
AVVYII++DKV RH+KTR D
Sbjct: 185 AVVYIIKKDKVIKRHLKTRQD 205
>gi|365981473|ref|XP_003667570.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
gi|343766336|emb|CCD22327.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
Length = 205
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 112/201 (55%), Positives = 156/201 (77%), Gaps = 1/201 (0%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
+ NGG +VAM GK+CVAIACD R G Q +++NF+KIF G H+++G+ GLATD T+
Sbjct: 6 SINGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFHYG-HVFLGITGLATDVTTLS 64
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ R++ NLYELKE+R + P+ ++S+ LYE+RFGPYFV P+V G++ ++ +P I
Sbjct: 65 ETFRYKSNLYELKEDRAIEPETFTQLVSSTLYEKRFGPYFVGPVVAGINSKSGKPFIAGF 124
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
DLIGC+++ DF+V G SDQL+GMCE+L+EPNLE +DLFETI+QAL+NA +R+A+SGWG
Sbjct: 125 DLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQALLNAADRDALSGWG 184
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
AVVYII++DKV RH+K R D
Sbjct: 185 AVVYIIKKDKVIKRHLKMRQD 205
>gi|406701627|gb|EKD04743.1| proteasome subunit beta type 3 [Trichosporon asahii var. asahii CBS
8904]
Length = 210
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 155/210 (73%), Gaps = 5/210 (2%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS+VAM GK+CVAIA D R G Q T +A NF+K+F V +Y GLPGLATD
Sbjct: 1 MSIMEYNGGSVVAMVGKDCVAIAGDLRLGQQATGVAMNFEKVFPVNDTLYFGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPET---- 116
T+ +++RFR N+Y +KE R+++P ++S+ LYE+RFGPYF+EP+V G+ P T
Sbjct: 61 FTLKEQMRFRVNMYRMKEEREITPVTFTNLLSSTLYEKRFGPYFIEPVVAGIAPATEANP 120
Query: 117 -AEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNAC 175
+P I MD IGC+ P DF V G +++LYG E LWEPNLEP+DLFETI+Q L+NA
Sbjct: 121 NPQPFISTMDTIGCITTPKDFAVAGTATEKLYGTAEGLWEPNLEPEDLFETISQVLLNAV 180
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+R+A+SGWGAVV+II +DKV R +++RMD
Sbjct: 181 DRDALSGWGAVVHIITKDKVVTRMLRSRMD 210
>gi|331245973|ref|XP_003335621.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309314611|gb|EFP91202.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 204
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 153/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM NGGS+VAM GK CVAIACD R G Q +A NF+K+FQV M++GLPGLATDT
Sbjct: 1 MSIMELNGGSVVAMVGKGCVAIACDLRLGNQALTVACNFEKVFQVTDKMFIGLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ R R N+Y++KE R + P+ + +IS+ LY++RFGPYFVEP+V GLD + EP
Sbjct: 61 FTLKNVFRHRVNMYKMKEERVIEPQTMAHLISSTLYQKRFGPYFVEPVVAGLDSKN-EPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I DLIGC+N DFVV G S +L+GM E LWEP+L P+DLFETI+Q L+NA +R+A
Sbjct: 120 IAATDLIGCINFAKDFVVSGTASSKLFGMAEALWEPDLAPEDLFETISQTLLNAVDRDAY 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV+IIE D+VT R +K+RMD
Sbjct: 180 SGWGAVVWIIEADQVTKRVLKSRMD 204
>gi|350536231|ref|NP_001232468.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
gi|197128389|gb|ACH44887.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
gi|197128390|gb|ACH44888.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
Length = 205
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 164/205 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNGG+++AM G+ CVAIA D+RFGIQ ++ + Q+IF +G + +GL GLATD
Sbjct: 1 MSILAYNGGAVLAMRGRGCVAIAADRRFGIQAQTVSTDCQRIFPMGQRLLLGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q+V Q+++FR NLYELKE R++ P+ ++M+SN+LYERRFGPY+ EP++ GLDP + EP
Sbjct: 61 QSVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYAEPVIAGLDPVSLEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFV+ G CS+Q+YGMCE+LWEP++EP+ LFETI+QA++NA +R+A+
Sbjct: 121 ICSLDLIGCPMVTQDFVLSGTCSEQMYGMCESLWEPDMEPEHLFETISQAMLNAVDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV++IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|196002749|ref|XP_002111242.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
gi|190587193|gb|EDV27246.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
Length = 191
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 152/192 (79%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
MTGKNCVAIA D+RFGIQ + FQ+I+ + H+Y+G GLATD TV K++FR N+
Sbjct: 1 MTGKNCVAIAADRRFGIQAQTIGHEFQRIYGMSDHLYIGFSGLATDVTTVSNKLKFRLNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+ENR+M P+ ++++S++LYE+RFGPYFVEP++ GLD + A+P +G++DLIGC
Sbjct: 61 YMLRENREMKPETFMSLVSSLLYEKRFGPYFVEPVIAGLD-KNAKPFVGSLDLIGCPMIT 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DFVV G S+QLYGMCE+LWEP+LE DDLFE+I+QAL+NA +R+ VSGWG +VY+IE+D
Sbjct: 120 EDFVVSGTASEQLYGMCESLWEPDLEADDLFESISQALLNAVDRDCVSGWGGIVYVIEKD 179
Query: 194 KVTVRHVKTRMD 205
KVT + +K RMD
Sbjct: 180 KVTEKILKARMD 191
>gi|444323175|ref|XP_004182228.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
gi|387515275|emb|CCH62709.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
Length = 205
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 155/199 (77%), Gaps = 1/199 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG +VAMTGK+CVAIACD R G Q +++NF+KIF G H++ G+ GLATD T+ +
Sbjct: 8 NGGVVVAMTGKDCVAIACDLRLGSQSLGVSNNFEKIFHYG-HVFFGITGLATDVTTLNEL 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ N+Y+LKENR + P+ ++S+ LY +RFGPYFV P+V GL+ +T +P I DL
Sbjct: 67 FRYKTNMYKLKENRSIEPETFTNLVSSTLYSKRFGPYFVGPVVAGLNSKTGKPYIAGFDL 126
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC+++ DF+V G SDQL+GMCE+L+EPNLE +DLFETI+QAL+NA +R+A+SGWGAV
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQALLNAVDRDALSGWGAV 186
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYII++DKV R++KTR D
Sbjct: 187 VYIIKKDKVIKRYLKTRQD 205
>gi|255712483|ref|XP_002552524.1| KLTH0C06886p [Lachancea thermotolerans]
gi|238933903|emb|CAR22086.1| KLTH0C06886p [Lachancea thermotolerans CBS 6340]
Length = 205
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 155/199 (77%), Gaps = 1/199 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG +VAMTGK+CVAIACD R G Q +A+NF+KIF G H+++GL GLATD T+ +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVANNFEKIFHYG-HVFLGLTGLATDVTTLSET 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ N+Y+LKE+R + P+ ++S+ LYE+RFGPYF P+V G++ T +P I DL
Sbjct: 67 FRYKTNMYKLKEDRFIEPETFTQLVSSTLYEKRFGPYFTGPVVAGINSRTGKPYISGFDL 126
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC+++ DFVV G S+QL+GMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGWGA
Sbjct: 127 IGCIDEAKDFVVSGTASEQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAA 186
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYII++DKV R++KTR D
Sbjct: 187 VYIIKKDKVIKRYLKTRQD 205
>gi|196476700|gb|ACG76215.1| proteasome beta 3 subunit [Amblyomma americanum]
Length = 182
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 149/182 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG ++AM GK+CVAIA D+R G +G +A +FQ+IF++G +Y GLPGLATDT
Sbjct: 1 MSIMSYNGGVVLAMKGKDCVAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYEL+E RK++PK L ++ISN+LYERRFGPYFV+P+V GLDP + EP
Sbjct: 61 QTVAQRLKFRINLYELREGRKITPKTLGSVISNLLYERRFGPYFVQPVVAGLDPVSNEPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MDLIGC++ P DFVV G C +Q YGMCETLWEP++ PD+LFE AQAL+NA +R++
Sbjct: 121 ICGMDLIGCIDSPKDFVVAGTCEEQCYGMCETLWEPDMGPDELFEATAQALMNAFDRDSS 180
Query: 181 SG 182
SG
Sbjct: 181 SG 182
>gi|353239440|emb|CCA71352.1| probable PUP3-20S proteasome subunit beta3 [Piriformospora indica
DSM 11827]
Length = 205
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 152/205 (74%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS+VAM GK+CVAIA D R G Q +A NF+K+F V + +G+ GLATD
Sbjct: 1 MSIMEYNGGSVVAMAGKDCVAIASDLRLGNQALTIATNFEKVFPVTERIMLGMAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + RFR N+Y +KE R++ P+ ++S+ LYERRFGPYF+EP++ GL T +P
Sbjct: 61 LTLRDRFRFRVNMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVIAGLGKGTNKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I + D+IGC+N DFVV G +D+L+G+ E+LWEP+LEP+DLFETI+Q L+NA +R+A
Sbjct: 121 IASTDVIGCINFAKDFVVAGTATDKLFGVAESLWEPDLEPEDLFETISQTLMNAVDRDAF 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV+II +KV RH+K RMD
Sbjct: 181 SGWGAVVHIITPEKVITRHLKARMD 205
>gi|448107066|ref|XP_004200900.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|448110074|ref|XP_004201531.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359382322|emb|CCE81159.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359383087|emb|CCE80394.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
Length = 206
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/202 (56%), Positives = 152/202 (75%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGGS VAM GK+CVAIA D R G Q L++NF+KIFQ G ++GL GLATD T+
Sbjct: 5 FSLNGGSAVAMVGKDCVAIASDLRLGNQSLGLSNNFEKIFQFGDKTFLGLTGLATDVITL 64
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ RF+ NLY+L+E R + PK L ++S+ LYE+RFGPYFV P+V GLDP++ P I
Sbjct: 65 SEVFRFKHNLYKLREERDIEPKTLANLVSSTLYEKRFGPYFVSPLVAGLDPKSNVPFICG 124
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D IGC++ DF+VGG SDQLYG+CE+L+EP+LEP+DLFETI+Q L+NA +R+A+SGW
Sbjct: 125 FDSIGCIDFAKDFIVGGTASDQLYGLCESLYEPSLEPEDLFETISQVLLNAVDRDALSGW 184
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GAVVYI+ +DK+ R +KTR D
Sbjct: 185 GAVVYIVTKDKIIRRVLKTRQD 206
>gi|388583046|gb|EIM23349.1| N-terminal nucleophile aminohydrolase [Wallemia sebi CBS 633.66]
Length = 205
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 151/205 (73%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS+VAM GK CVAIA D R G + +LA NF+K+F + ++VGLPGLA+D
Sbjct: 1 MSIMEYNGGSVVAMRGKKCVAIAGDLRLGNRNMSLAANFEKVFPITQKLFVGLPGLASDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ RFR N+Y+LKE R++ P ++S+ LYERR+ PYFVEP+V GLDP EP
Sbjct: 61 LTLRDTFRFRTNMYKLKEGREIEPNTFAHLVSSTLYERRWSPYFVEPVVAGLDPNNGEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I DLIGC+N DFVV G SD+++GM E+LWEP+LE +DLFETI+Q L+N +R+A+
Sbjct: 121 IAATDLIGCLNFAKDFVVSGTASDKMFGMAESLWEPDLEAEDLFETISQTLLNGVDRDAL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV++I +K+ R +K+RMD
Sbjct: 181 SGWGAVVHVITPEKMITRSLKSRMD 205
>gi|302306791|ref|NP_983166.2| ABR217Cp [Ashbya gossypii ATCC 10895]
gi|299788687|gb|AAS50990.2| ABR217Cp [Ashbya gossypii ATCC 10895]
gi|374106369|gb|AEY95279.1| FABR217Cp [Ashbya gossypii FDAG1]
Length = 205
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 154/199 (77%), Gaps = 1/199 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG +VAMTGK+CVAIACD R G Q +++ F+KIF G H+++GL GLATD T+Y+
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNRFEKIFNFG-HVFLGLTGLATDVTTLYET 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ N+Y+++E+R + P ++S+ LYERRFGPYFV P+V G+ +T +P I DL
Sbjct: 67 FRYKTNMYKMQEDRPIEPNTFSQLVSSTLYERRFGPYFVGPVVAGIHSKTKKPYIAGFDL 126
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC+ + DF+V G SDQL+GMCE+L+EPNLE +DLFETI+QAL+NA +R+A+SGWGAV
Sbjct: 127 IGCIEESKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQALLNAADRDALSGWGAV 186
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VY+IE+D+V R++KTR D
Sbjct: 187 VYLIEKDRVVKRYLKTRQD 205
>gi|358057136|dbj|GAA97043.1| hypothetical protein E5Q_03718 [Mixia osmundae IAM 14324]
Length = 204
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 151/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS M NGGS++AM GK+CVAIACD R G Q +A N +KIF + Y+GLPGLA+DT
Sbjct: 1 MSAMEINGGSVIAMLGKDCVAIACDLRLGNQALTVACNQEKIFSITPTTYLGLPGLASDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
TVY+K+R R N+Y ++E+R ++P ++S+ LYERRFGPYF+EP++ GL+ + P
Sbjct: 61 LTVYEKLRHRTNMYAMREDRLITPTTFTHLVSSTLYERRFGPYFIEPIIAGLEAD-GTPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ DLIGC+N DFVV G S++LYGM E LWEP L+ + LFETI QAL+NA +R+A
Sbjct: 120 VATTDLIGCINAAKDFVVAGTASEKLYGMSEALWEPGLDAEALFETIGQALLNAVDRDAY 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVVY+IE+DKVT R +K RMD
Sbjct: 180 SGWGAVVYVIEKDKVTKRTLKARMD 204
>gi|254578212|ref|XP_002495092.1| ZYRO0B03146p [Zygosaccharomyces rouxii]
gi|238937982|emb|CAR26159.1| ZYRO0B03146p [Zygosaccharomyces rouxii]
Length = 205
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 158/201 (78%), Gaps = 1/201 (0%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T NGG VAMTGK+CVAIACD R G+Q +++NF+KIF+ G H+++GL GLATD T+
Sbjct: 6 TINGGVCVAMTGKDCVAIACDLRLGMQSLGVSNNFEKIFKYG-HVFLGLTGLATDVTTLS 64
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ R++ NLY LKE+R + P+ ++S+ LYERRFGP+FV P+V G++ +T +P I
Sbjct: 65 ETFRYKTNLYNLKEDRPIEPETFTQLVSSSLYERRFGPFFVGPIVAGINSKTGKPFIAGF 124
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D+IGC+++ DF+V G SDQL+GMCE+L+EP+LEP+DLFETI+Q+L+NA +R+A+SGWG
Sbjct: 125 DMIGCIDEAKDFIVSGTASDQLFGMCESLYEPDLEPEDLFETISQSLLNAVDRDALSGWG 184
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
AVVYII++DK ++++TR D
Sbjct: 185 AVVYIIQKDKAVKKYLRTRQD 205
>gi|392577300|gb|EIW70429.1| hypothetical protein TREMEDRAFT_68051 [Tremella mesenterica DSM
1558]
Length = 210
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 153/211 (72%), Gaps = 7/211 (3%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS+VAM GK+CVAIA D R G Q +A NF K+F V +Y GLPGLATD
Sbjct: 1 MSIMEYNGGSVVAMIGKDCVAIASDLRLGQQSVGVAMNFDKVFPVNDKLYYGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVG------LDP 114
T+ +++RFR N+Y +KE R+++PK ++S+ LYE+RFGPYF+EP+V G LDP
Sbjct: 61 YTLREQLRFRVNMYRMKEEREITPKTFTHLVSSTLYEKRFGPYFIEPVVAGLPSPTELDP 120
Query: 115 ETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNA 174
+P I MD IGC+ P DF V G S++L+G+ E LWEP+LEP+DLFETI+Q L+NA
Sbjct: 121 H-PKPFISTMDTIGCITTPKDFAVAGTASNKLFGVAEGLWEPDLEPEDLFETISQTLLNA 179
Query: 175 CERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+R+A+SGWGA+V++I DKV R ++ RMD
Sbjct: 180 VDRDALSGWGAIVHVITHDKVITRQLRARMD 210
>gi|402077481|gb|EJT72830.1| proteasome component PUP3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 205
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 155/204 (75%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD
Sbjct: 3 SPFSINGGAAVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYG-DVFLGLTGLATDVS 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP+T++P I
Sbjct: 62 TVSDLFRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTSQPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G S+QL+GMCE+LWEPNLEP+DLFETI+QAL++A +R+A+S
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASEQLFGMCESLWEPNLEPEDLFETISQALLSAVDRDALS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 182 GWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|398364611|ref|NP_011020.3| proteasome core particle subunit beta 3 [Saccharomyces cerevisiae
S288c]
gi|141337|sp|P25451.1|PSB3_YEAST RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Macropain subunit PUP3; AltName:
Full=Multicatalytic endopeptidase complex subunit PUP3;
AltName: Full=Proteasome component PUP3
gi|11514000|pdb|1G0U|I Chain I, A Gated Channel Into The Proteasome Core Particle
gi|11514014|pdb|1G0U|W Chain W, A Gated Channel Into The Proteasome Core Particle
gi|14488814|pdb|1FNT|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488828|pdb|1FNT|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765708|pdb|1Z7Q|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765722|pdb|1Z7Q|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|178847468|pdb|2ZCY|I Chain I, Yeast 20s Proteasome:syringolin A-Complex
gi|178847482|pdb|2ZCY|W Chain W, Yeast 20s Proteasome:syringolin A-Complex
gi|178847510|pdb|3BDM|I Chain I, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847524|pdb|3BDM|W Chain W, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462944|pdb|3NZJ|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462958|pdb|3NZJ|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462972|pdb|3NZW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462986|pdb|3NZW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463000|pdb|3NZX|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463014|pdb|3NZX|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|333361180|pdb|3MG6|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361194|pdb|3MG6|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361208|pdb|3MG7|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361222|pdb|3MG7|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361236|pdb|3MG8|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361250|pdb|3MG8|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|378792249|pdb|3UN4|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792263|pdb|3UN4|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792283|pdb|3UN8|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792297|pdb|3UN8|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|403071956|pdb|4B4T|3 Chain 3, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|403072200|pdb|4G4S|J Chain J, Structure Of Proteasome-Pba1-Pba2 Complex
gi|444302347|pdb|4INR|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302361|pdb|4INR|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302375|pdb|4INT|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302389|pdb|4INT|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302403|pdb|4INU|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302417|pdb|4INU|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|172337|gb|AAA34946.1| ORF1 [Saccharomyces cerevisiae]
gi|603332|gb|AAB64649.1| Pup3p [Saccharomyces cerevisiae]
gi|151944812|gb|EDN63071.1| 20S proteasome subunit beta3_sc [Saccharomyces cerevisiae YJM789]
gi|190405659|gb|EDV08926.1| proteasome component PUP3 [Saccharomyces cerevisiae RM11-1a]
gi|256271461|gb|EEU06515.1| Pup3p [Saccharomyces cerevisiae JAY291]
gi|259146019|emb|CAY79279.1| Pup3p [Saccharomyces cerevisiae EC1118]
gi|285811728|tpg|DAA07756.1| TPA: proteasome core particle subunit beta 3 [Saccharomyces
cerevisiae S288c]
gi|323305263|gb|EGA59010.1| Pup3p [Saccharomyces cerevisiae FostersB]
gi|323333773|gb|EGA75164.1| Pup3p [Saccharomyces cerevisiae AWRI796]
gi|323337981|gb|EGA79220.1| Pup3p [Saccharomyces cerevisiae Vin13]
gi|323355291|gb|EGA87116.1| Pup3p [Saccharomyces cerevisiae VL3]
gi|349577761|dbj|GAA22929.1| K7_Pup3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766114|gb|EHN07615.1| Pup3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 205
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 155/199 (77%), Gaps = 1/199 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG +VAMTGK+CVAIACD R G Q +++ F+KIF G H+++G+ GLATD T+ +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTTLNEM 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ NLY+LKE R + P+ ++S+ LYERRFGPYFV P+V G++ ++ +P I DL
Sbjct: 67 FRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC+++ DF+V G SDQL+GMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGWGAV
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAV 186
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYII++D+V R++K R D
Sbjct: 187 VYIIKKDEVVKRYLKMRQD 205
>gi|392299798|gb|EIW10890.1| Pup3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 205
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 155/199 (77%), Gaps = 1/199 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG +VAMTGK+CVAIACD R G Q +++ F+KIF G H+++G+ GLATD T+ +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTTLNEM 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ NLY+LKE R + P+ ++S+ LYERRFGPYFV P+V G++ ++ +P I DL
Sbjct: 67 FRYKTNLYKLKEERTIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC+++ DF+V G SDQL+GMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGWGAV
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAV 186
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYII++D+V R++K R D
Sbjct: 187 VYIIKKDEVVKRYLKMRQD 205
>gi|197128391|gb|ACH44889.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
Length = 205
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 163/205 (79%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ NGG+++AM G+ CVAIA D+RFGIQ ++ + Q+IF +G + +GL GLATD
Sbjct: 1 MSILACNGGAVLAMRGRGCVAIAADRRFGIQAQTVSTDCQRIFPMGQRLLLGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q+V Q+++FR NLYELKE R++ P+ ++M+SN+LYERRFGPY+ EP++ GLDP + EP
Sbjct: 61 QSVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYAEPVIAGLDPVSLEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFV+ G CS+Q+YGMCE+LWEP++EP+ LFETI+QA++NA +R+A+
Sbjct: 121 ICSLDLIGCPMVTQDFVLSGTCSEQMYGMCESLWEPDMEPEHLFETISQAMLNAVDRDAI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV++IE+DK+T R +K RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|3114278|pdb|1RYP|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114292|pdb|1RYP|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513421|pdb|1G65|I Chain I, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513435|pdb|1G65|W Chain W, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|20150385|pdb|1JD2|I Chain I, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150392|pdb|1JD2|P Chain P, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|93279376|pdb|2F16|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279390|pdb|2F16|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032210|pdb|2FAK|I Chain I, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032224|pdb|2FAK|W Chain W, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490851|pdb|2GPL|I Chain I, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490865|pdb|2GPL|W Chain W, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016375|pdb|3D29|I Chain I, Proteasome Inhibition By Fellutamide B
gi|190016389|pdb|3D29|W Chain W, Proteasome Inhibition By Fellutamide B
gi|197725329|pdb|3E47|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725343|pdb|3E47|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939220|pdb|3DY3|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939234|pdb|3DY3|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939248|pdb|3DY4|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939262|pdb|3DY4|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828245|pdb|3GPJ|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828259|pdb|3GPJ|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588329|pdb|3GPT|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588343|pdb|3GPT|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588357|pdb|3GPW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588371|pdb|3GPW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588551|pdb|3HYE|I Chain I, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588565|pdb|3HYE|W Chain W, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508231|pdb|1VSY|J Chain J, Proteasome Activator Complex
gi|298508245|pdb|1VSY|X Chain X, Proteasome Activator Complex
gi|298508447|pdb|3L5Q|N Chain N, Proteasome Activator Complex
gi|298508461|pdb|3L5Q|Z Chain Z, Proteasome Activator Complex
gi|330689389|pdb|3MG4|I Chain I, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689403|pdb|3MG4|W Chain W, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361152|pdb|3MG0|I Chain I, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361166|pdb|3MG0|W Chain W, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892349|pdb|3OKJ|I Chain I, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892363|pdb|3OKJ|W Chain W, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780427|pdb|3OEU|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780441|pdb|3OEU|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780455|pdb|3OEV|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780469|pdb|3OEV|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610680|pdb|3TDD|I Chain I, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610694|pdb|3TDD|W Chain W, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545854|pdb|3SHJ|I Chain I, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545868|pdb|3SHJ|W Chain W, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|390980824|pdb|3SDI|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980838|pdb|3SDI|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980852|pdb|3SDK|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980866|pdb|3SDK|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550740|pdb|4GK7|I Chain I, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550754|pdb|4GK7|W Chain W, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|409973868|pdb|4FZC|I Chain I, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973882|pdb|4FZC|W Chain W, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973896|pdb|4FZG|I Chain I, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973910|pdb|4FZG|W Chain W, 20s Yeast Proteasome In Complex With Glidobactin
Length = 204
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 155/199 (77%), Gaps = 1/199 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG +VAMTGK+CVAIACD R G Q +++ F+KIF G H+++G+ GLATD T+ +
Sbjct: 7 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTTLNEM 65
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ NLY+LKE R + P+ ++S+ LYERRFGPYFV P+V G++ ++ +P I DL
Sbjct: 66 FRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 125
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC+++ DF+V G SDQL+GMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGWGAV
Sbjct: 126 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAV 185
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYII++D+V R++K R D
Sbjct: 186 VYIIKKDEVVKRYLKMRQD 204
>gi|320164183|gb|EFW41082.1| proteasome subunit beta type-3 [Capsaspora owczarzaki ATCC 30864]
Length = 192
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 150/192 (78%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK CVAIA D+RFGIQ ++ +FQK F++G +++GL GLATD QTV K++FR N+
Sbjct: 1 MKGKGCVAIAADRRFGIQAQTVSTDFQKTFKMGDRLFIGLAGLATDVQTVASKLQFRVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ + +++N+LYE+RFGP+F+EP++ GLDP + EP + DLIGC +
Sbjct: 61 YHLREERSVAPETFMNIVANVLYEKRFGPFFIEPVIAGLDPVSGEPFVAATDLIGCPDVA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF V G S+QLYGMCE+++EPNLEP+DLFE ++Q L+N C+R+A+SGWGAVV+IIE+D
Sbjct: 121 DDFAVVGTASEQLYGMCESMYEPNLEPEDLFEVVSQCLMNGCDRDAISGWGAVVHIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K RMD
Sbjct: 181 KVTTRTLKARMD 192
>gi|195389042|ref|XP_002053187.1| GJ23747 [Drosophila virilis]
gi|194151273|gb|EDW66707.1| GJ23747 [Drosophila virilis]
Length = 208
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 109/202 (53%), Positives = 154/202 (76%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+TYNGG ++AM GK+C+ IA D+RFG+Q ++ QK+F + +Y+GL GL TD TV
Sbjct: 7 ITYNGGCVIAMQGKDCIGIATDRRFGLQSHTAGEDCQKVFHLSPRLYLGLTGLQTDIMTV 66
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
Y ++ +R+N+YE+ E R++SPKVL ++S++LYE RFGP+FVEP++ GLDPET EP I
Sbjct: 67 YNRLLYRKNVYEINEGREVSPKVLTELLSHLLYEHRFGPFFVEPVIAGLDPETLEPYICC 126
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
MDLIGC N +DFV G CSDQL GMCE++W PNL +LF+TIAQA++ + R+AVSGW
Sbjct: 127 MDLIGCANVTNDFVATGTCSDQLVGMCESVWSPNLNATELFKTIAQAMLGSFNRDAVSGW 186
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
G+ ++I+E+DK+T R ++TR D
Sbjct: 187 GSSIFILEKDKITERLIRTRKD 208
>gi|401881470|gb|EJT45770.1| proteasome subunit beta type 3 [Trichosporon asahii var. asahii CBS
2479]
Length = 207
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 152/207 (73%), Gaps = 5/207 (2%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M YNGGS+VAM GK+CVAIA D R G Q T +A NF+K+F V +Y GLPGLATD T+
Sbjct: 1 MEYNGGSVVAMVGKDCVAIAGDLRLGQQATGVAMNFEKVFPVNDTLYFGLPGLATDVFTL 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPET-----AE 118
+++RFR N+Y +KE R+++P ++S+ LYE+RFGPYF+EP+V G+ P T +
Sbjct: 61 KEQMRFRVNMYRMKEEREITPVTFTNLLSSTLYEKRFGPYFIEPVVAGIAPATEANPNPQ 120
Query: 119 PIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERN 178
P I MD IGC+ P DF V G +++LYG E LWEPNLEP+DLFETI+Q L+NA +R+
Sbjct: 121 PFISTMDTIGCITTPKDFAVAGTATEKLYGTAEGLWEPNLEPEDLFETISQVLLNAVDRD 180
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A+SGWGAVV+II +DKV R +++RMD
Sbjct: 181 ALSGWGAVVHIITKDKVVTRMLRSRMD 207
>gi|328862302|gb|EGG11403.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 201
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 155/202 (76%), Gaps = 1/202 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M NGGS++AM GK+CVAIACD R G Q +A NF+K+F V +Y+GLPGLA+DT T+
Sbjct: 1 MELNGGSVIAMVGKDCVAIACDLRLGNQALTVACNFEKVFPVTDKVYIGLPGLASDTVTL 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
Q+ R R N+Y++KE R + P+ + ++S+ LY++RFGPYFVEP++ GL+ + EP I
Sbjct: 61 RQQFRHRVNMYKMKEERTIEPETMAHLVSSTLYQKRFGPYFVEPVIAGLNSKN-EPFIAA 119
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
DLIGC+N DFVV G SD+L+GM E LWEPNLEP+DLFETI+Q+L+NA +R+A SGW
Sbjct: 120 TDLIGCINFAKDFVVSGTASDKLFGMAEALWEPNLEPEDLFETISQSLMNAMDRDAYSGW 179
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GAVV+II++D++ R +K+RMD
Sbjct: 180 GAVVWIIQKDQIIKRVLKSRMD 201
>gi|56755285|gb|AAW25822.1| unknown [Schistosoma japonicum]
Length = 190
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 151/190 (79%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ +NG +++ M+GK+C AIACD RFG+ ++ +F K++ +G +YVG PGLATD
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV+Q+++FR+N+YEL+ENR + P+ + M+SN+LYERRFGPYFVEP+V G+D T++P
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIGCV + +DFVV G C++Q+YGMCETLWE N++ +LFE I+Q ++NA R+A+
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAI 180
Query: 181 SGWGAVVYII 190
SGWGA VY++
Sbjct: 181 SGWGARVYLM 190
>gi|367001775|ref|XP_003685622.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
gi|357523921|emb|CCE63188.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
Length = 205
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 155/201 (77%), Gaps = 1/201 (0%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
+ NGG +VAM GK+CVAIACD R G Q +++NF+KIF G H++ G+ GLATD T+
Sbjct: 6 SINGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFNYG-HVFFGITGLATDVTTLN 64
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ R++ NLY+LKE R + P+ ++S+ LYE+RFGPYFV P+V G++ ++ +P I
Sbjct: 65 EVFRYKTNLYKLKEERPIEPETFTQLVSSTLYEKRFGPYFVGPVVAGINSKSGKPFIAGF 124
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
DLIGC+++ DF+V G SDQL+GMCE+L+EPNLE +DLFETI+QAL++A +R+A+SGWG
Sbjct: 125 DLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQALLSAADRDALSGWG 184
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
AVVYII++DKV RH++TR D
Sbjct: 185 AVVYIIKKDKVIKRHLRTRQD 205
>gi|367011527|ref|XP_003680264.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
gi|359747923|emb|CCE91053.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
Length = 205
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 154/199 (77%), Gaps = 1/199 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG +VAM GK+CVAIA D R G Q +++ F+KIF G H+++G+ GLATD T+ +
Sbjct: 8 NGGIVVAMAGKDCVAIASDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTTLSET 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ NLY+L+E+R + P+ ++S+ LYERRFGPYFV P+V G++ +T +P I DL
Sbjct: 67 FRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKTEKPFIAGFDL 126
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC+++ DF+V G SDQL+GMCE+L+EPNLE +DLFETI+QAL+NA +R+A+SGWGAV
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQALLNAADRDALSGWGAV 186
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYII++DKV R++KTR D
Sbjct: 187 VYIIKKDKVVKRYLKTRQD 205
>gi|320590790|gb|EFX03233.1| proteasome component [Grosmannia clavigera kw1407]
Length = 206
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 153/204 (75%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF K+FQ G ++++GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKVFQYGDNVFLGLTGLATDVN 62
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ NLY L+E R ++P+ ++S+ LYERRFGP+FV P+V GL+P+T +P I
Sbjct: 63 TVSDLFRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPFFVSPVVAGLEPKTGQPFI 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G S+QL+GMCE+LWEP+L PD LFETI+QAL+NA +R+A+S
Sbjct: 123 CGFDSIGCIDFARDFIVSGTASEQLFGMCESLWEPDLGPDALFETISQALLNAVDRDALS 182
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 183 GWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|401626020|gb|EJS43988.1| pup3p [Saccharomyces arboricola H-6]
Length = 205
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 155/201 (77%), Gaps = 1/201 (0%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
+ NGG +VAM GK+CVAIACD R G Q +++ F+KIF G H++ G+ GLA+D T+
Sbjct: 6 SINGGVVVAMAGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFFGVTGLASDVTTLN 64
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ R++ NLY+L+E+R + P+ ++S+ LYERRFGPYFV P+V G++ ++ +P I
Sbjct: 65 EMFRYKTNLYKLREDRAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGF 124
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
DLIGC+++ DF+V G SDQL+GMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGWG
Sbjct: 125 DLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGWG 184
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
AVVYII++DKV R++K R D
Sbjct: 185 AVVYIIKKDKVVKRYLKMRQD 205
>gi|355714019|gb|AES04862.1| proteasome subunit beta type 3 [Mustela putorius furo]
Length = 180
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 148/180 (82%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGPY+ EP++ GLDP+T +P
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AV
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
>gi|358378900|gb|EHK16581.1| hypothetical protein TRIVIDRAFT_183933 [Trichoderma virens Gv29-8]
Length = 205
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 152/204 (74%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTISNNFPKIFQYG-DVFLGLTGLATDVS 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP+T +P I
Sbjct: 62 TVSDLFRYKVNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G S+QL+GMCE LWEP+LEPD LFETI+QAL+NA +R+A+S
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASEQLFGMCEGLWEPDLEPDALFETISQALLNAVDRDALS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 182 GWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|449295365|gb|EMC91387.1| hypothetical protein BAUCODRAFT_39558 [Baudoinia compniacensis UAMH
10762]
Length = 206
Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 114/204 (55%), Positives = 150/204 (73%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GKNCVAIACD R G+Q +++NF KIFQ ++GL GLATD
Sbjct: 3 SPFSINGGACVAMRGKNCVAIACDLRLGLQSLTVSNNFPKIFQYSPTAFLGLTGLATDVS 62
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV + R++ N+Y L+E R ++PK ++S+ LYERRFGP+FV P+V G+D ++ P I
Sbjct: 63 TVSELFRYKVNMYRLREERDIAPKTFAQLVSSSLYERRFGPWFVSPVVAGIDGKSGAPFI 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ +DF+V G SDQL+G CE LWEP+LEPDDLFETI+QAL+NA +R+A+S
Sbjct: 123 CGFDSIGCIDYAADFIVSGTASDQLFGTCEGLWEPDLEPDDLFETISQALLNAVDRDALS 182
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 183 GWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|365761090|gb|EHN02766.1| Pup3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841875|gb|EJT44194.1| PUP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 205
Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 153/199 (76%), Gaps = 1/199 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG +VAMTGK+CVAIACD R G Q +++ F+KIF G H+++G+ GLATD T+ +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTTLNEM 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ NLY+L+E R + P+ ++S+ LYERRFGPYFV P+V G++ ++ +P I DL
Sbjct: 67 FRYKTNLYKLREERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC+++ DF+V G SDQL+GMCE+L+EPNLE +DLFETI+QAL+NA +R+A+SGWGA
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQALLNAADRDALSGWGAA 186
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYII++DKV R++K R D
Sbjct: 187 VYIIKKDKVVKRYLKMRQD 205
>gi|146414175|ref|XP_001483058.1| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 151/202 (74%), Gaps = 1/202 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGG+ VAM GK+C+AIACD R G Q LA+NF+K+FQ+G ++GL GLATD T+
Sbjct: 5 FSINGGAAVAMVGKDCIAIACDTRLGSQSLGLANNFEKVFQMGKTTFLGLTGLATDVITL 64
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ R + NLY+L+E R+M PK L ++S LYERRFGPYFV P+V GL + +P I
Sbjct: 65 REDFRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLG-KGGQPFICG 123
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
DLIGC++ DF+V G SDQLYG CE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGW
Sbjct: 124 FDLIGCIDFAKDFIVSGTASDQLYGTCESLYEPNLEPEDLFETISQALLNAVDRDALSGW 183
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GAVVY++ ++KV R ++TR D
Sbjct: 184 GAVVYVVTKEKVVRRVLRTRQD 205
>gi|255731824|ref|XP_002550836.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
gi|240131845|gb|EER31404.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
Length = 206
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 151/202 (74%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGG+ VAM GK C+AIA D R G Q +++NF+KIF++ Y+GL GLA+D T+
Sbjct: 5 FSINGGAAVAMIGKECIAIASDLRLGQQSLGVSNNFEKIFEISPKTYLGLTGLASDVLTL 64
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ RF+ NLY+L+E+ + P L +IS+ LYERRFGP+FV P+V GLD +T +P I
Sbjct: 65 KELFRFKTNLYKLREDHSIEPSTLANLISSSLYERRFGPWFVSPIVAGLDSKTNKPFICG 124
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D IGC++ DF+V G SDQLYGMCE+L+EPNLEP++LFETI+QAL+NA +R+A+SGW
Sbjct: 125 FDSIGCIDYSHDFIVSGTASDQLYGMCESLYEPNLEPEELFETISQALLNAVDRDALSGW 184
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GAVVYII +DKVT R +KTR D
Sbjct: 185 GAVVYIITKDKVTKRVLKTRQD 206
>gi|328770084|gb|EGF80126.1| hypothetical protein BATDEDRAFT_88542 [Batrachochytrium
dendrobatidis JAM81]
Length = 204
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 150/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNG +I+AM GKNCVAIA D+RFG+Q L +FQKIF + Y+GL GLATD
Sbjct: 1 MSIMEYNGSAIIAMAGKNCVAIAADRRFGVQALTLGTDFQKIFPITDKTYLGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + R++ N+Y L+E R++SPK M+S+ YE+RFGPYFVEP+V GL+ + P
Sbjct: 61 TTLKDRFRYKVNMYHLEEEREISPKTFSHMVSSTQYEKRFGPYFVEPIVAGLEKDNT-PF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I +MD IGC+N DFVV G SDQ+ GMCE+LWEP+LEP++LFE I+QAL+NA +R+A+
Sbjct: 120 ICSMDTIGCINFAKDFVVCGTASDQMNGMCESLWEPDLEPEELFEVISQALLNAIDRDAI 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG +V+II V R +K RMD
Sbjct: 180 SGWGGIVHIITPTSVITRTLKGRMD 204
>gi|256070137|ref|XP_002571402.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
gi|350646868|emb|CCD58589.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
Length = 194
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 149/192 (77%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ +NG +++AM+GK+C AIACD RFG+ ++ +F K++ +G +YVG PGLATD
Sbjct: 1 MSILAHNGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVYPLGPRLYVGFPGLATDN 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV+Q+++FR+N+YEL+EN+ + P+ + M+SN+LYERRFGPYFVEP++ G+D T +P
Sbjct: 61 QTVFQRLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIGCV + +DFVV G C++Q+YGMCETLWE N+ +LFE I+Q ++NA R+AV
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMNSKELFECISQCILNALNRDAV 180
Query: 181 SGWGAVVYIIEQ 192
SGWGA VY+
Sbjct: 181 SGWGARVYLFHS 192
>gi|367052597|ref|XP_003656677.1| hypothetical protein THITE_2147182 [Thielavia terrestris NRRL 8126]
gi|347003942|gb|AEO70341.1| hypothetical protein THITE_2147182 [Thielavia terrestris NRRL 8126]
Length = 192
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 146/192 (76%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G H+++GL GLATD TV R++ NL
Sbjct: 1 MAGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVATVADLFRYKVNL 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ ++S+ LYERRFGP+FV P+V GLDP+T +P I D IGC++
Sbjct: 61 YRLREERHIAPRTFANLVSSSLYERRFGPFFVSPVVAGLDPKTGQPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+GMCE+LWEP+L PD+LFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTASDQLFGMCESLWEPDLGPDELFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|171696000|ref|XP_001912924.1| hypothetical protein [Podospora anserina S mat+]
gi|170948242|emb|CAP60406.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 152/199 (76%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
+GG+ VAM GK+CVAIACD R G+Q +++NF KIFQ G ++++GL GLATD TV
Sbjct: 5 DGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDNVFLGLTGLATDVATVSDL 64
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ N+Y L+E R+++P+ ++S+ LYERRFGP+FV P+V GLDP+T +P I D
Sbjct: 65 FRYKVNMYRLREERQIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGQPFICGFDS 124
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF+V G ++QL+GMCE+LWEPNL PD LFETI+Q+L+NA +R+A+SGWGA
Sbjct: 125 IGCIDFAKDFIVSGTATEQLFGMCESLWEPNLGPDQLFETISQSLLNAVDRDALSGWGAH 184
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 185 VYIIEKDKVTKRLLKGRQD 203
>gi|50290063|ref|XP_447463.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526773|emb|CAG60400.1| unnamed protein product [Candida glabrata]
Length = 205
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 154/199 (77%), Gaps = 1/199 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG +VAM GK+CVAIACD R G Q +++NF+K+F G H++ G+ GLATD T+ +
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGNQSLGVSNNFEKVFNYG-HVFFGITGLATDVTTLNEL 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ NLY+L+E+R + P+ ++S+ LYERRFGPYFV P+V G++ ++ +P I DL
Sbjct: 67 FRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC+++ DF+V G SDQL+GMCE+L+EPNLE +DLFETI+QAL+NA +R+A+SGWGAV
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQALLNAADRDALSGWGAV 186
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYII++DKV R++K R D
Sbjct: 187 VYIIKKDKVVKRYLKMRQD 205
>gi|302925511|ref|XP_003054110.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735051|gb|EEU48397.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 205
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/204 (55%), Positives = 152/204 (74%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYG-DVFLGLTGLATDVN 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP+T +P I
Sbjct: 62 TVSDLFRYKTNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G S+QL+GMCE LWEP++EPD LFETI+Q+L+NA +R+A+S
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASEQLFGMCEGLWEPDMEPDALFETISQSLLNAVDRDALS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 182 GWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|449545308|gb|EMD36279.1| 20S proteasome subunit beta 3 [Ceriporiopsis subvermispora B]
Length = 208
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 152/208 (73%), Gaps = 3/208 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM NGGS++AM GK+CVAIA D R G Q ++ F+KIF + +YVGLPGLATD
Sbjct: 1 MSIMQMNGGSVIAMVGKDCVAIASDLRLGNQSLGISSKFEKIFPMTDRVYVGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA--- 117
T++Q+ R+R N+Y +KE R++ P+ ++S+ LYE+RFGPYF+EP++ GL +
Sbjct: 61 TTLHQQFRYRLNMYTIKEEREIEPETFAHLVSSTLYEKRFGPYFIEPVIAGLQKTPSGDL 120
Query: 118 EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACER 177
+P I DLIGC+N DFVV G SD+L+G+ E LWEP+LEP+DLFETIAQ L+NA +R
Sbjct: 121 KPYIAATDLIGCLNFAKDFVVAGTASDKLFGVAEGLWEPDLEPEDLFETIAQTLLNAVDR 180
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A SGWGAVVY++ +DKV R +K RMD
Sbjct: 181 DAYSGWGAVVYVLTKDKVIKRELKGRMD 208
>gi|358391261|gb|EHK40665.1| beta subunit Pup3 of the 20S proteasome [Trichoderma atroviride IMI
206040]
Length = 205
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 151/204 (74%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTISNNFPKIFQYG-DVFLGLTGLATDVS 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP+T +P I
Sbjct: 62 TVSDLFRYKVNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G S+QL+GMCE LWEP+LEPD LFETI+QAL+ A +R+A+S
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASEQLFGMCEGLWEPDLEPDALFETISQALLTAVDRDALS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 182 GWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|335345796|gb|AEH41478.1| proteasome component Pup3 [Endocarpon pusillum]
Length = 206
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 147/199 (73%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK CVAIACD R G+Q +++NF KIFQ Y+GL GLATD TV
Sbjct: 8 NGGACVAMVGKGCVAIACDLRLGLQSLTVSNNFPKIFQYAPSCYLGLTGLATDVSTVSDL 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R+R N+Y L+E R +SP+ L ++S+ LYERRFGPYFV P++ G++ T +P I D
Sbjct: 68 FRYRVNMYRLREERNISPQTLANLVSSSLYERRFGPYFVSPVLAGINHTTGKPFICGFDS 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF+VGG SDQL+G CE LWEP+LEPD+LFET++QAL+NA +R+A+SGWGA
Sbjct: 128 IGCIDFAKDFIVGGTASDQLFGTCEGLWEPDLEPDELFETVSQALLNAVDRDALSGWGAH 187
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|410084182|ref|XP_003959668.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
gi|372466260|emb|CCF60533.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
Length = 205
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 154/201 (76%), Gaps = 1/201 (0%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
+ NGG +VAM GK+CVAIACD R G Q +++NF+KIF H++ G+ GLATD T+
Sbjct: 6 SINGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFNY-EHVFFGITGLATDVTTLN 64
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ R++ NLY+LKE+R + P+ ++S+ LYERRFGPYFV P+V G++ ++ +P I
Sbjct: 65 EVFRYKTNLYKLKEDRAIEPETFAQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAGF 124
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
DLIGC+++ DF+V G SDQL+GMCE+L+EPNLE +DLFETI+QAL+NA +R+A+SGWG
Sbjct: 125 DLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQALLNAADRDALSGWG 184
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
AVVYII++DKV R+++ R D
Sbjct: 185 AVVYIIKKDKVIKRNLRMRQD 205
>gi|254570058|ref|XP_002492139.1| Beta 3 subunit of the 20S proteasome involved in
ubiquitin-dependent catabolism [Komagataella pastoris
GS115]
gi|238031936|emb|CAY69859.1| Beta 3 subunit of the 20S proteasome involved in
ubiquitin-dependent catabolism [Komagataella pastoris
GS115]
gi|328351376|emb|CCA37775.1| 20S proteasome subunit beta 3 [Komagataella pastoris CBS 7435]
Length = 205
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 151/199 (75%), Gaps = 1/199 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VAM GK+CVAIACD R G Q +A+NF+K+FQ G H+++GL GLATD T+ +
Sbjct: 8 NGGSAVAMVGKDCVAIACDLRLGNQSLGVANNFEKVFQFG-HVFLGLTGLATDVITLNET 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
RF+ NLY+++E R + P+ ++S LYE+RFGPYFV P+V G++ +T +P I + D
Sbjct: 67 FRFKTNLYKMREERDIEPETFANLVSTSLYEKRFGPYFVGPIVAGINSKTNQPFICSFDS 126
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF V G SDQLYGMCE L+EPNL PDDLFETI+QAL+NA +R+A+SGWGA
Sbjct: 127 IGCIDYSKDFAVVGTASDQLYGMCEGLYEPNLSPDDLFETISQALLNANDRDALSGWGAA 186
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYII +DK++ R++K+R D
Sbjct: 187 VYIITKDKISKRYLKSRQD 205
>gi|389626557|ref|XP_003710932.1| proteasome component PUP3 [Magnaporthe oryzae 70-15]
gi|351650461|gb|EHA58320.1| proteasome component PUP3 [Magnaporthe oryzae 70-15]
Length = 206
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 112/204 (54%), Positives = 151/204 (74%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIF S +++GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFSYSSSVFLGLTGLATDVA 62
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GL+P+T P I
Sbjct: 63 TVSDLFRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLEPKTGAPFI 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G S+QL+GMCE+LWEP+L P+DLFETI+QAL++A +R+A+S
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASEQLFGMCESLWEPDLGPEDLFETISQALLSAVDRDALS 182
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 183 GWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|402225130|gb|EJU05191.1| 20S proteasome subunit beta 3 [Dacryopinax sp. DJM-731 SS1]
Length = 205
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 148/205 (72%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS+VAM GKNCVAIA D R G Q +A NF+K+F V +Y GL GLATD
Sbjct: 1 MSIMEYNGGSVVAMKGKNCVAIASDLRLGNQAMTVATNFEKVFPVTDSLYCGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ ++ R+R N+Y +KE R++ P ++S+ LYERRFGPYFVEP++ G+ +T EP
Sbjct: 61 ITLRERFRYRVNMYTIKEERQIEPATFAQLVSSTLYERRFGPYFVEPVIAGISKKTGEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I DLIGC+N DFVV G SD+L+G+ E LWEP++ +DLFETI+Q L+NA +R+A
Sbjct: 121 IAAADLIGCLNFAKDFVVCGTASDKLFGVAEGLWEPDMAAEDLFETISQTLMNAVDRDAF 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA+V++I +KV R +K RMD
Sbjct: 181 SGWGAIVHVITPEKVISRTLKARMD 205
>gi|344232930|gb|EGV64803.1| proteasome-domain-containing protein [Candida tenuis ATCC 10573]
gi|344232931|gb|EGV64804.1| hypothetical protein CANTEDRAFT_113576 [Candida tenuis ATCC 10573]
Length = 205
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 149/201 (74%), Gaps = 1/201 (0%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
+ NGGS VAM GK+CVAIACD R G Q LA+NF+KIF + + +GL GLATD T+
Sbjct: 6 SINGGSAVAMVGKDCVAIACDLRLGSQSLGLANNFEKIFTINDKVMLGLTGLATDVTTLN 65
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ RF+ NLYEL+E RK+ P+ ++S+ LYE+RFGPYF P+V GL+ E +P I
Sbjct: 66 EVFRFKNNLYELREERKIEPQTFANLVSSTLYEKRFGPYFCGPVVAGLNKEN-KPFICGF 124
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
DLIGC++ DF+V G S+QLYGMCE+L+EPNLE DDLFETI+QAL+NA +R+ +SGWG
Sbjct: 125 DLIGCIDFAKDFIVSGTASEQLYGMCESLYEPNLEADDLFETISQALLNAADRDTMSGWG 184
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
AVVY++ +D VT R +KTR D
Sbjct: 185 AVVYVVTKDSVTKRVLKTRQD 205
>gi|190348459|gb|EDK40915.2| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 150/202 (74%), Gaps = 1/202 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGG+ VAM GK+C+AIACD R G Q LA+NF+K+FQ+G ++GL GLATD T+
Sbjct: 5 FSINGGAAVAMVGKDCIAIACDTRLGSQSLGLANNFEKVFQMGKTTFLGLTGLATDVITL 64
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ R + NLY+L+E R+M PK L ++S LYERRFGPYFV P+V GL + +P I
Sbjct: 65 REDFRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLG-KGGQPFICG 123
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D IGC++ DF+V G SDQLYG CE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGW
Sbjct: 124 FDSIGCIDFAKDFIVSGTASDQLYGTCESLYEPNLEPEDLFETISQALLNAVDRDALSGW 183
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GAVVY++ ++KV R ++TR D
Sbjct: 184 GAVVYVVTKEKVVRRVLRTRQD 205
>gi|156036470|ref|XP_001586346.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980]
gi|154698329|gb|EDN98067.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 206
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 149/204 (73%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIF G +Y+GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVS 62
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R +SP + ++S+ LYERRFGP+FV P++ GLD +T +P I
Sbjct: 63 TVSDLFRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVIAGLDQKTGKPFI 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+S
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALS 182
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 183 GWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|397628563|gb|EJK68962.1| hypothetical protein THAOC_09830 [Thalassiosira oceanica]
Length = 204
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 153/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNG +I+AM GK+CVAIA D R GI +A +F+K+F++ + VGL GLATD
Sbjct: 1 MSILEYNGAAIIAMAGKDCVAIASDNRLGISYQTVAMDFKKVFKMNDRLMVGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+ Q +RFR NLYEL+E R+M+P+V ++SNMLYE+RFGPYF EP++ GLDP+ +P
Sbjct: 61 QTLDQLLRFRMNLYELREEREMTPEVFTNLMSNMLYEKRFGPYFCEPVIAGLDPK-GKPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+G MDLIG DF V G C +YGMCETLW+P++E ++LFET+AQAL+ + +R+A+
Sbjct: 120 LGTMDLIGAQAMAKDFCVAGTCDGNMYGMCETLWKPDMEKEELFETLAQALLASVDRDAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VV+II ++ +T R +K R D
Sbjct: 180 SGWGGVVHIITKEGITSRELKGRQD 204
>gi|398394287|ref|XP_003850602.1| proteasome core particle subunit beta 3 [Zymoseptoria tritici
IPO323]
gi|339470481|gb|EGP85578.1| hypothetical protein MYCGRDRAFT_105064 [Zymoseptoria tritici
IPO323]
Length = 206
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 148/199 (74%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK+CVAIACD R G+Q +++NF KIF GS +Y+GL GLATD +V +
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGSSVYLGLTGLATDVSSVSEL 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ N+Y L+E R +SPK ++S+ LYERRFGP+FV P+V G+D + +P I D
Sbjct: 68 FRYKVNMYRLREERDISPKTFSNLVSSSLYERRFGPWFVSPVVAGIDGTSGKPFICGFDS 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+SGWGA
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAH 187
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|385301682|gb|EIF45855.1| proteasome component pup3 [Dekkera bruxellensis AWRI1499]
Length = 206
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 112/201 (55%), Positives = 153/201 (76%), Gaps = 1/201 (0%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
TYNGGS VAM GK+CVAIA D R G Q L+++F+KIF G H+++GL GLATD +V+
Sbjct: 7 TYNGGSAVAMVGKDCVAIASDLRLGQQSLGLSNDFEKIFHYG-HVFLGLTGLATDVMSVH 65
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ +R + NLY++KE R++ P +IS+ LY+RRFGP+FV P+V GL+ + +P I
Sbjct: 66 EDLRKKTNLYKMKEQREIEPXSFANLISSSLYKRRFGPWFVGPIVAGLNSHSGKPFICGF 125
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D IGC++ DF+V G S+QL+GMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGWG
Sbjct: 126 DYIGCIDFAKDFIVAGTASEQLFGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGWG 185
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
AVVY+I +DKV R +KTR D
Sbjct: 186 AVVYVITKDKVVKRFLKTRQD 206
>gi|241957591|ref|XP_002421515.1| macropain subunit, putative; multicatalytic endopeptidase complex
subunit, putative; proteasome component, putative
[Candida dubliniensis CD36]
gi|223644859|emb|CAX40854.1| macropain subunit, putative [Candida dubliniensis CD36]
Length = 206
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 149/202 (73%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGG+ VAM GK+C+AIA D R G Q +++NF+KIF VG ++GL GLATD T+
Sbjct: 5 FSINGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVITL 64
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ RF+ NLY+L+E R + P L ++S+ LYERRFGP+FV P+V GL + +P I
Sbjct: 65 KELFRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFICG 124
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D IGC++ DF+V G SDQLYGMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGW
Sbjct: 125 FDSIGCIDFSHDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGW 184
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GAVVYI+ +DKV R +KTR D
Sbjct: 185 GAVVYIVTKDKVIKRVLKTRQD 206
>gi|380481881|emb|CCF41580.1| proteasome component PUP3 [Colletotrichum higginsianum]
Length = 205
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 114/204 (55%), Positives = 152/204 (74%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYG-DVFLGLTGLATDVT 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R ++P ++S+ LYERRFGPYFV P+V GLDP+T +P I
Sbjct: 62 TVGDLFRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G S+QL+GMCE+LWEP+L PD+LFETI+Q+L+NA +R+A+S
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASEQLFGMCESLWEPDLGPDELFETISQSLLNAVDRDALS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 182 GWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|405117743|gb|AFR92518.1| proteasome subunit beta type 3 [Cryptococcus neoformans var. grubii
H99]
Length = 210
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 150/210 (71%), Gaps = 5/210 (2%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS+M NGGS+VAM GK+CVAIA D R G Q +A NF K+F V +Y GLPGLATD
Sbjct: 1 MSVMELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPVNDKLYCGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA--- 117
T+ + +RFR N+Y +KE R+++PK ++S+ LYE+RFGP+F+EP+V GL T+
Sbjct: 61 YTLREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLPTPTSLEP 120
Query: 118 --EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNAC 175
+P I MD IGC+ P DF V G +D+LYG+ E LWEP+LEP+DLFETI+Q L++A
Sbjct: 121 HPKPYISTMDTIGCITTPKDFAVAGTAADKLYGIAEGLWEPDLEPEDLFETISQTLLSAV 180
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+R+A+SGWGAVV II DKV R ++ RMD
Sbjct: 181 DRDALSGWGAVVNIITHDKVITRTLRARMD 210
>gi|409043787|gb|EKM53269.1| hypothetical protein PHACADRAFT_259498 [Phanerochaete carnosa
HHB-10118-sp]
Length = 208
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 152/208 (73%), Gaps = 3/208 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM +NGGS++AM GK+CVAIA D R G+Q ++ +F+KIF V ++VGLPGLATD
Sbjct: 1 MSIMQHNGGSVIAMVGKDCVAIASDLRLGVQSLSITSDFEKIFPVTDRLFVGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA--- 117
T+ ++ R+R N+Y +KE R++ P+ ++S+ LYERRFGPYF+EP++ G+ A
Sbjct: 61 TTLREQFRYRVNMYTIKEEREIEPQTFAQLVSSTLYERRFGPYFIEPVMAGMQKTPAGGY 120
Query: 118 EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACER 177
P I DLIGC+N DFVV G S++L+G+ E LWEP+LE +DLFETI+Q L+NA +R
Sbjct: 121 APFIAATDLIGCLNFAKDFVVAGTASEKLFGVAEGLWEPDLEAEDLFETISQTLLNALDR 180
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A SGWGAVV++I +DKV R +K RMD
Sbjct: 181 DAFSGWGAVVHVITKDKVITRKLKGRMD 208
>gi|453082236|gb|EMF10284.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 206
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 150/204 (73%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIF GS Y+GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFPFGSSTYLGLTGLATDVS 62
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV + R++ N+Y L+E R +SP+ ++S+ LYE+RFGP+F+ P+V GLD +T +P I
Sbjct: 63 TVSELFRYKVNMYRLREERDISPRTFANLVSSSLYEKRFGPWFISPVVAGLDSKTGKPFI 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G SDQL+G CE LWEP+L P+DLFET++QAL++A +R+A+S
Sbjct: 123 CGFDSIGCIDFAKDFIVAGTASDQLFGTCEGLWEPDLGPEDLFETMSQALLSAVDRDALS 182
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 183 GWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|393233198|gb|EJD40772.1| 20S proteasome subunit beta 3 [Auricularia delicata TFB-10046 SS5]
Length = 207
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 151/207 (72%), Gaps = 2/207 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS++AM GKNCVAIA D R G Q +A NF+K+F V +Y+GLPGLATD
Sbjct: 1 MSIMEYNGGSVIAMVGKNCVAIASDLRLGNQALTVATNFEKVFPVTDRIYLGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPET--AE 118
T+ ++ R+R N+Y +KE R++ P+ ++S+ LYERRFGPYF+EP++ GL ++
Sbjct: 61 ATLRERFRYRVNMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVIAGLTSPARGSK 120
Query: 119 PIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERN 178
P I DLIGC+N DFVV G S +L+G+ E LWEP+LEP++LFETI+Q L+NA +R+
Sbjct: 121 PFIAATDLIGCLNFAKDFVVCGTASSKLFGVAEGLWEPDLEPEELFETISQTLLNAVDRD 180
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A SGWGA+V++I +KV R +K RMD
Sbjct: 181 AFSGWGAIVHVITPEKVVTRTLKGRMD 207
>gi|170085607|ref|XP_001874027.1| 20S proteasome subunit beta 3 [Laccaria bicolor S238N-H82]
gi|164651579|gb|EDR15819.1| 20S proteasome subunit beta 3 [Laccaria bicolor S238N-H82]
Length = 208
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 149/208 (71%), Gaps = 3/208 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS+VAM GK+CVAIA D R G Q ++ NFQKIF + +Y+GLPGLATD
Sbjct: 1 MSIMEYNGGSVVAMVGKDCVAIASDLRLGNQALGISSNFQKIFPITDRIYLGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA--- 117
T+ ++ RFR N+Y +KE R++ P+ ++S+ LYE RFGPYFVEP++ GL +
Sbjct: 61 TTLRERFRFRVNMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFVEPVMAGLSKTPSGGV 120
Query: 118 EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACER 177
+P I DLIGC+N DFVV G S +LYG+ E LWEP+LE +DLFETI+Q L+NA +R
Sbjct: 121 KPFIAATDLIGCLNFAKDFVVAGTASSKLYGVAEGLWEPDLEAEDLFETISQTLLNAVDR 180
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A SGWG +V++I +DKV R +K RMD
Sbjct: 181 DAYSGWGCIVHVITKDKVVTRTLKGRMD 208
>gi|327304369|ref|XP_003236876.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326459874|gb|EGD85327.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 214
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 148/199 (74%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK+CVAIACD R G+Q +++ F KIF Y+GL GLATD TV Q
Sbjct: 16 NGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 75
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R++ NLY L+E R +SP+ L ++S+ LYE+RFGP+FV P++ G++ T +P I D
Sbjct: 76 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 135
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ +F+V G SDQLYG CE+LWEP+LEP+DLFETI+QAL+NA +R+A+SGWGA
Sbjct: 136 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 195
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 196 VYIIEKDKVTKRKLKGRQD 214
>gi|326472712|gb|EGD96721.1| proteasome subunit beta type-3 [Trichophyton tonsurans CBS 112818]
gi|326482041|gb|EGE06051.1| proteasome component PUP3 [Trichophyton equinum CBS 127.97]
Length = 206
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 148/199 (74%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK+CVAIACD R G+Q +++ F KIF Y+GL GLATD TV Q
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R++ NLY L+E R +SP+ L ++S+ LYE+RFGP+FV P++ G++ T +P I D
Sbjct: 68 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ +F+V G SDQLYG CE+LWEP+LEP+DLFETI+QAL+NA +R+A+SGWGA
Sbjct: 128 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 187
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 188 VYIIEKDKVTKRKLKGRQD 206
>gi|260946487|ref|XP_002617541.1| proteasome component PUP3 [Clavispora lusitaniae ATCC 42720]
gi|238849395|gb|EEQ38859.1| proteasome component PUP3 [Clavispora lusitaniae ATCC 42720]
Length = 192
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 146/192 (76%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK C+AIACD R G Q +A+NF+KIFQ G ++GL GLATD T+ + R + NL
Sbjct: 1 MVGKECIAIACDLRLGNQSLGVANNFEKIFQFGDKTFLGLTGLATDVLTLKEDFRLKHNL 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y+L+E R++ P+ L ++S+ LYE+RFGPYFV P+V GL+ +T +P I DLIGC++
Sbjct: 61 YKLREEREIEPRTLANLVSSSLYEKRFGPYFVGPIVAGLESKTNKPFICGFDLIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQLYGMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGWGAVVYI+ +D
Sbjct: 121 KDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGWGAVVYIVTKD 180
Query: 194 KVTVRHVKTRMD 205
KV R +KTR D
Sbjct: 181 KVVKRVLKTRQD 192
>gi|68488966|ref|XP_711676.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|77023006|ref|XP_888947.1| hypothetical protein CaO19_1336 [Candida albicans SC5314]
gi|46432996|gb|EAK92454.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|76573760|dbj|BAE44844.1| hypothetical protein [Candida albicans]
gi|238883475|gb|EEQ47113.1| proteasome component PUP3 [Candida albicans WO-1]
Length = 206
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 149/202 (73%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGG+ VAM GK+C+AIA D R G Q +++NF+KIF VG ++GL GLATD ++
Sbjct: 5 FSINGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVISL 64
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ RF+ NLY+L+E R + P L ++S+ LYERRFGP+FV P+V GL + +P I
Sbjct: 65 KELFRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFICG 124
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D IGC++ DF+V G SDQLYGMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGW
Sbjct: 125 FDSIGCIDFSHDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGW 184
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GAVVYI+ +DKV R +KTR D
Sbjct: 185 GAVVYIVTKDKVIKRVLKTRQD 206
>gi|58258585|ref|XP_566705.1| proteasome subunit beta type 3 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222842|gb|AAW40886.1| proteasome subunit beta type 3, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 210
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 149/210 (70%), Gaps = 5/210 (2%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS+M NGGS+VAM GK+CVAIA D R G Q +A NF K+F + +Y GLPGLATD
Sbjct: 1 MSVMELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPINDKLYCGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA--- 117
T+ + +RFR N+Y +KE R+++PK ++S+ LYE+RFGP+F+EP+V GL T+
Sbjct: 61 YTLREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLPTPTSLEP 120
Query: 118 --EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNAC 175
P I MD IGC+ P DF V G +D+LYG+ E LWEP+LEP+DLFETI+Q L++A
Sbjct: 121 HPRPYISTMDTIGCITTPKDFAVAGTAADKLYGIAEGLWEPDLEPEDLFETISQTLLSAV 180
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+R+A+SGWGAVV II DKV R ++ RMD
Sbjct: 181 DRDALSGWGAVVNIITHDKVITRTLRARMD 210
>gi|321249095|ref|XP_003191339.1| proteasome subunit beta type 3 [Cryptococcus gattii WM276]
gi|317457806|gb|ADV19552.1| Proteasome subunit beta type 3, putative [Cryptococcus gattii
WM276]
Length = 210
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 149/210 (70%), Gaps = 5/210 (2%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS+M NGGS+VAM GK+CVAIA D R G Q +A NF K+F + +Y GLPGLATD
Sbjct: 1 MSVMELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPINDKLYCGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPET---- 116
T+ + +RFR N+Y +KE R+++PK ++S+ LYE+RFGP+F+EP+V GL T
Sbjct: 61 YTLREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLTTPTPLEP 120
Query: 117 -AEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNAC 175
+P I MD IGC+ P DF V G +D+LYG+ E LWEP+LEP+DLFETI+Q L+NA
Sbjct: 121 HPKPYISTMDTIGCITTPKDFAVAGTAADKLYGIAEGLWEPDLEPEDLFETISQTLLNAV 180
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+R+A+SGWGAVV II D+V R ++ RMD
Sbjct: 181 DRDALSGWGAVVNIITHDQVITRTLRARMD 210
>gi|19075485|ref|NP_587985.1| 20S proteasome component beta 3, Pup3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|17380272|sp|Q9Y7T8.1|PSB3_SCHPO RecName: Full=Probable proteasome subunit beta type-3
gi|4539605|emb|CAB40016.1| 20S proteasome component beta 3, Pup3 (predicted)
[Schizosaccharomyces pombe]
Length = 204
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 148/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS VAM GKNCVAIA D R G+Q +L +NF K+F +G Y+GL GLATD
Sbjct: 1 MSIMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+Y+ R++ NLY+ +E R++ PK ++S+ LYE+RFGPYF P+V G+ + P
Sbjct: 61 QTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNT-PF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I D IGC++ DF+V G ++QLYGMCE+++EPNLEPDDLFETI+QAL+NA +R+ +
Sbjct: 120 ICGFDSIGCIDFAEDFIVSGTATEQLYGMCESVYEPNLEPDDLFETISQALLNAQDRDCI 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VVY+I DK R VK R D
Sbjct: 180 SGWGCVVYVITADKCIKRLVKGRQD 204
>gi|310793894|gb|EFQ29355.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 205
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 152/204 (74%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYG-DVFLGLTGLATDVT 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R ++P ++S+ LYERRFGPYFV P+V GLDP+T +P I
Sbjct: 62 TVGDLFRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G S+QL+GMCE+LWEP+L P++LFETI+Q+L+NA +R+A+S
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASEQLFGMCESLWEPDLGPEELFETISQSLLNAVDRDALS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 182 GWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|295672716|ref|XP_002796904.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282276|gb|EEH37842.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/204 (54%), Positives = 149/204 (73%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S+ NGG+ VAM GK+CVAIACD R G+Q +++NF KIF Y+GL GLATD
Sbjct: 3 SVFDINGGACVAMIGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVS 62
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV +RF+ N+Y L+E R++SP+ L ++S+ LYE+RFGPYFV P++ G++ T EP I
Sbjct: 63 TVSDVLRFKVNMYRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGEPFI 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G S+QL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+S
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASEQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALS 182
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 183 GWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|406868327|gb|EKD21364.1| proteasome subunit beta type-3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 212
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 150/204 (73%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIF G +Y+GL GLATD
Sbjct: 10 SPFSINGGACVAMVGKDCVAIACDLRLGLQSLTVSNNFPKIFSYG-DVYLGLTGLATDVS 68
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R +SP + ++S+ LYE+RFGPYFV P+V G+D ++ +P I
Sbjct: 69 TVSDLFRYKVNMYRLREERNISPSTMANLVSSSLYEKRFGPYFVSPVVAGIDQKSGKPFI 128
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+VGG SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+S
Sbjct: 129 CGFDSIGCIDFAKDFIVGGTASDQLFGTCEGLWEPDLAPEDLFETISQALLNAVDRDALS 188
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 189 GWGAHVYIIEKDKVTKRLLKGRQD 212
>gi|302662910|ref|XP_003023105.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
gi|291187083|gb|EFE42487.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
Length = 212
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 148/199 (74%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
+GG+ VAM GK+CVAIACD R G+Q +++ F KIF Y+GL GLATD TV Q
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R++ NLY L+E R +SP+ L ++S+ LYE+RFGP+FV P++ G++ T +P I D
Sbjct: 74 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ +F+V G SDQLYG CE+LWEP+LEP+DLFETI+QAL+NA +R+A+SGWGA
Sbjct: 134 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 193
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 194 VYIIEKDKVTKRKLKGRQD 212
>gi|315045460|ref|XP_003172105.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
gi|311342491|gb|EFR01694.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
Length = 212
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 148/199 (74%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
+GG+ VAM GK+CVAIACD R G+Q +++ F KIF Y+GL GLATD TV Q
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R++ NLY L+E R +SP+ L ++S+ LYE+RFGP+FV P++ G++ T +P I D
Sbjct: 74 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ +F+V G SDQLYG CE+LWEP+LEP+DLFETI+QAL+NA +R+A+SGWGA
Sbjct: 134 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 193
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 194 VYIIEKDKVTKRKLKGRQD 212
>gi|296805183|ref|XP_002843416.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
gi|238844718|gb|EEQ34380.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
Length = 223
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 148/199 (74%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
+GG+ VAM GK+CVAIACD R G+Q +++ F KIF Y+GL GLATD TV Q
Sbjct: 25 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 84
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R++ NLY L+E R +SP+ L ++S+ LYE+RFGP+FV P++ G++ T +P + D
Sbjct: 85 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFVCGFDS 144
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ +F+V G SDQLYG CE+LWEP+LEP+DLFETI+QAL+NA +R+A+SGWGA
Sbjct: 145 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 204
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 205 VYIIEKDKVTKRKLKGRQD 223
>gi|320580955|gb|EFW95177.1| Beta 3 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 191
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 150/192 (78%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G Q +A+NF+KIFQ+G H+++GL GLATD TVY+ R + NL
Sbjct: 1 MVGKDCVAIACDLRLGNQSLGVANNFEKIFQLG-HVFLGLTGLATDVTTVYENFRMKTNL 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y+++E R++ P+ ++S+ LYERRFGP+FV P+V G++ +T +P I D IGC++
Sbjct: 60 YKMREEREIEPESFANLVSSSLYERRFGPWFVGPLVAGINSKTGKPFICGFDFIGCIDYA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DFVV G +DQLYGMCE+L+EP+LEP+DLFETI+QAL+NA +R+A+SGWGAVVY+I +D
Sbjct: 120 KDFVVSGTATDQLYGMCESLYEPDLEPEDLFETISQALLNAADRDALSGWGAVVYVITKD 179
Query: 194 KVTVRHVKTRMD 205
KV R++K+R D
Sbjct: 180 KVIKRYLKSRQD 191
>gi|302501602|ref|XP_003012793.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
gi|291176353|gb|EFE32153.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
Length = 212
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 148/199 (74%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
+GG+ VAM GK+CVAIACD R G+Q +++ F KIF Y+GL GLATD TV Q
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R++ NLY L+E R +SP+ L ++S+ LYE+RFGP+FV P++ G++ T +P I D
Sbjct: 74 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ +F+V G SDQLYG CE+LWEP+LEP+DLFETI+QAL+NA +R+A+SGWGA
Sbjct: 134 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 193
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 194 VYIIEKDKVTKRKLKGRQD 212
>gi|440636325|gb|ELR06244.1| proteasome component PUP3 [Geomyces destructans 20631-21]
Length = 205
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 149/204 (73%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF K+F G +Y+GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQSLTVSNNFPKVFNYG-DVYLGLTGLATDVA 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R ++P ++S+ LYE+RFGP+FV P+V GLDP+T P I
Sbjct: 62 TVSDLFRYKVNMYRLREERNIAPSTFANLVSSSLYEKRFGPFFVSPVVAGLDPKTGIPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G SDQL+G CE LWEP+LEP+DLFETI+QAL+NA +R+A+S
Sbjct: 122 CGFDSIGCIDFAKDFIVAGTASDQLFGTCEGLWEPDLEPEDLFETISQALLNAVDRDALS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 182 GWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|82802844|gb|ABB92466.1| rcPSMB3 [Gorilla gorilla]
Length = 204
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 154/204 (75%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+I+AM GKNCVAIA D+ FGIQ + +FQ+IF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNCVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q ++FR NLYELKE +++ P +M++N LYE+ FGPY+ EP++ GLD +T +P
Sbjct: 61 QTVAQCLKFRLNLYELKEGQQIKPYTFTSMVANPLYEKHFGPYYTEPVIAGLDLKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
++DLIGC DFVV G ++Q+YGMCE+LWEPN++P+ LFETI+QA++NA + A
Sbjct: 121 SCSLDLIGCPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDWGAG 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRM 204
SG G +++I E+DK+T R +K +M
Sbjct: 181 SGMGVIIHITEKDKITTRTLKAQM 204
>gi|367018856|ref|XP_003658713.1| hypothetical protein MYCTH_2055659 [Myceliophthora thermophila ATCC
42464]
gi|347005980|gb|AEO53468.1| hypothetical protein MYCTH_2055659 [Myceliophthora thermophila ATCC
42464]
Length = 192
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 142/192 (73%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G H+++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVSTVADLFRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ ++S LYERRFGPYFV P+V GL+P+T P I D IGC++
Sbjct: 61 YRLREERHIAPRTFANLVSTTLYERRFGPYFVNPVVAGLEPKTGAPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G ++QLYGMCE WEPNL PD+LFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTATEQLYGMCENFWEPNLGPDELFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|392597640|gb|EIW86962.1| 20S proteasome subunit beta 3 [Coniophora puteana RWD-64-598 SS2]
Length = 208
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 149/208 (71%), Gaps = 3/208 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS++AM GK+CVAIA D R G Q ++ NFQK+F V +YVGL GL TD
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQALGISSNFQKVFPVTDRIYVGLAGLGTDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA--- 117
T+ ++ R+R N+Y +KE R++ P+ ++S+ LYE RFGPYF+EP+V GL +
Sbjct: 61 ITLRERFRYRVNMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFIEPVVAGLSKTPSGGL 120
Query: 118 EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACER 177
+P I DLIGC+N DFVV G S +L+G+ E LWEP+LEP+DLFETI+Q L+NA +R
Sbjct: 121 KPFIAATDLIGCINFAKDFVVSGTASSKLFGLAEGLWEPDLEPEDLFETISQTLLNAVDR 180
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A SGWGAVV+++ +DK+ R +K RMD
Sbjct: 181 DAYSGWGAVVHVLTKDKIISRTLKGRMD 208
>gi|224014869|ref|XP_002297096.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968215|gb|EED86564.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 204
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 153/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNG +I+AM+GK+CV IA D R GI ++ +F+KIFQ+ ++VGL GLA+D
Sbjct: 1 MSILEYNGAAIIAMSGKDCVGIASDNRMGISYQTVSMDFKKIFQMNEKLFVGLAGLASDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+ Q +RFR NLYEL+E R+M+PKV ++SNMLYE+RFGPYF EP+V GLD E +P
Sbjct: 61 QTLDQLLRFRMNLYELREEREMTPKVFTNLLSNMLYEKRFGPYFAEPVVAGLD-ENDKPY 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIG + DFVV G C+ LYGMCETL++ ++E ++LFET+AQAL+ + +R+A+
Sbjct: 120 LATMDLIGATSSTEDFVVAGTCAGNLYGMCETLYKKDMEQEELFETLAQALLASVDRDAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VV+II ++ + R +K R D
Sbjct: 180 SGWGGVVHIITKEGIISRELKGRQD 204
>gi|402589044|gb|EJW82976.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 205
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 151/205 (73%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+Y+GG+I+AM G +CV IA D R G Q T +A N +K+ ++G +Y+GL G +D
Sbjct: 1 MSIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFNSDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
+TV KI FR+NLYEL+ENRK+ P+V M+SN+LY+ RFG YF EP++ GLDP T +P
Sbjct: 61 KTVLDKITFRKNLYELRENRKIKPEVTAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IGC++ P+DFV G ++ L G+CE W+ ++ PD+LFE AQ++++A ER+A
Sbjct: 121 ICAMDTIGCISAPNDFVAVGTGTEYLLGVCEGFWKEDMNPDELFEATAQSMLSAMERDAA 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA+VY I +DKV ++ +KTRMD
Sbjct: 181 SGWGAIVYTITKDKVNIKTIKTRMD 205
>gi|323309416|gb|EGA62633.1| Pup3p [Saccharomyces cerevisiae FostersO]
Length = 191
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 149/192 (77%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
MTGK+CVAIACD R G Q +++ F+KIF G H+++G+ GLATD T+ + R++ NL
Sbjct: 1 MTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTTLNEMFRYKTNL 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y+LKE R + P+ ++S+ LYERRFGPYFV P+V G++ ++ +P I DLIGC+++
Sbjct: 60 YKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+GMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGWGAVVYII++D
Sbjct: 120 KDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKKD 179
Query: 194 KVTVRHVKTRMD 205
+V R++K R D
Sbjct: 180 EVVKRYLKMRQD 191
>gi|242217207|ref|XP_002474405.1| predicted protein [Postia placenta Mad-698-R]
gi|220726447|gb|EED80396.1| predicted protein [Postia placenta Mad-698-R]
Length = 208
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 151/208 (72%), Gaps = 3/208 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS++AM GK+CVAIA D R G Q +A +F+KIF + +Y+GLPGLATD
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQALGIASDFEKIFPMTDRVYLGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLD--PETA- 117
T+ ++ R+R N+Y +KE R++ P+ ++S+ LYERRFGPYF+EP++ GL P
Sbjct: 61 TTLREQFRYRLNMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVMAGLQRLPNGGY 120
Query: 118 EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACER 177
+P I DLIGC+N DFVV G S +L+G+ E LWEP+LEP+DLFETIAQ L+NA +R
Sbjct: 121 KPFIAATDLIGCINFAKDFVVAGTASSKLFGVAEGLWEPDLEPEDLFETIAQTLLNAVDR 180
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A SGWGAVV++I +DK R +K RMD
Sbjct: 181 DAYSGWGAVVHVITKDKAIKRVLKGRMD 208
>gi|390595223|gb|EIN04629.1| 20S proteasome subunit beta 3 [Punctularia strigosozonata HHB-11173
SS5]
Length = 224
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 150/224 (66%), Gaps = 19/224 (8%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM NGGS+VAM GK+CVAIA D R G Q LA NFQK+F + +Y+GLPGLATD
Sbjct: 1 MSIMETNGGSVVAMVGKDCVAIASDLRLGNQAQGLAANFQKVFSITDRIYLGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLD--PETA- 117
T+Y++ RFR N+Y +KE R++SP+ ++S+ LYE RFGPYF+EP++ G+ P +
Sbjct: 61 TTLYERFRFRTNMYTIKEEREISPETFAHLVSSTLYEHRFGPYFIEPVIAGISAAPTASP 120
Query: 118 ----------------EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPD 161
+P I D+IGC+N DFVV G S L+G+ E LWEP+LEP+
Sbjct: 121 SAVSSGTLAPPPGKKWQPFIAATDVIGCINFAKDFVVAGTASSTLFGVAEGLWEPDLEPE 180
Query: 162 DLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
DLFETI+Q ++NA +R+A SGWG VV++I DKV R +K RMD
Sbjct: 181 DLFETISQTMLNALDRDAYSGWGVVVHVITPDKVITRTLKARMD 224
>gi|336376544|gb|EGO04879.1| hypothetical protein SERLA73DRAFT_173986 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389555|gb|EGO30698.1| hypothetical protein SERLADRAFT_454981 [Serpula lacrymans var.
lacrymans S7.9]
Length = 208
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 150/208 (72%), Gaps = 3/208 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS++AM GK+CVAIA D R G Q +++ NFQK+F V +YVGLPGL TD
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQALSISSNFQKVFPVTDRIYVGLPGLGTDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA--- 117
T+ ++ R+R N+Y +KE R++ P+ ++S+ LYE RFGPYF+EP++ GL +
Sbjct: 61 TTLRERFRYRINMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFIEPVIAGLSKTPSGGV 120
Query: 118 EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACER 177
+P+I DLIGC+N DFVV G S +L G+ E LWEP+LEP+DLFETI+Q L+N+ +R
Sbjct: 121 KPLIAAADLIGCLNFAKDFVVAGTASTKLLGVAEGLWEPDLEPEDLFETISQTLLNSVDR 180
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A SGWGAVV++I +D + R +K RMD
Sbjct: 181 DAFSGWGAVVHVITKDSIISRTLKGRMD 208
>gi|212537585|ref|XP_002148948.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068690|gb|EEA22781.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 206
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 145/199 (72%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK+CVAIACD R G+Q +++NF KIF Y+G+ GLATD TV
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVTTVSDL 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ N+Y L+E R +SP+ L ++S+ LYERRFGPYFV P++ G++ T +P I D
Sbjct: 68 FRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGFDS 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF+V G SDQL+G CE LWEP+L PDDLFETI+QAL+NA +R+A+SGWGA
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGAN 187
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|354548652|emb|CCE45389.1| hypothetical protein CPAR2_704030 [Candida parapsilosis]
Length = 206
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 148/202 (73%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGG+ VAM GK+CVAIA D R G Q +++NF+KIF+ G Y+ L GLATD T+
Sbjct: 5 FSINGGAAVAMIGKDCVAIASDLRLGSQSLGVSNNFEKIFEFGDKTYMALTGLATDVITL 64
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
++ +F+ NLY+L+E R + P L ++S+ LYERRFGP+FV P+V GL + +P I
Sbjct: 65 HELFKFKTNLYKLREERSIEPSTLANLVSSSLYERRFGPWFVGPIVAGLSSKDNKPFICG 124
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D IGC++ DF+V G +DQLYGMCE L+EPNLEP+DLFETI+QAL+NA +R+A+SGW
Sbjct: 125 FDSIGCIDFSHDFIVSGTATDQLYGMCEGLYEPNLEPEDLFETISQALLNAVDRDALSGW 184
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GAVVYII +DKV R +KTR D
Sbjct: 185 GAVVYIITKDKVVKRVLKTRQD 206
>gi|336261120|ref|XP_003345351.1| hypothetical protein SMAC_04582 [Sordaria macrospora k-hell]
gi|380090602|emb|CCC11597.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 191
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 146/192 (76%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++PK ++S+ LYERRFGPYFV P+V GLDP+T+EP I D IGC++
Sbjct: 60 YRLREERNIAPKTFANLVSSSLYERRFGPYFVSPVVAGLDPKTSEPFICGFDSIGCIDFA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G ++QL+GMCE+LWEPNL P+DLFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 120 KDFIVSGTATEQLFGMCESLWEPNLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEKD 179
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|170583083|ref|XP_001896421.1| proteasome subunit beta type 3 [Brugia malayi]
gi|158596348|gb|EDP34705.1| proteasome subunit beta type 3, putative [Brugia malayi]
Length = 205
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 150/205 (73%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+Y+GG+I+AM G +CV IA D R G Q T +A N +K+ ++G +Y+GL G +D
Sbjct: 1 MSIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFHSDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
+TV KI FR+NLYEL+ENRK+ P+V M+SN+LY+ RFG YF EP++ GLDP T +P
Sbjct: 61 KTVLDKITFRKNLYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IGC++ P+DFV G ++ L G+CE W+ + PD+LFE AQ++++A ER+A
Sbjct: 121 ICAMDTIGCISAPNDFVAVGTGTEYLLGVCEGFWKEGMNPDELFEATAQSMLSAMERDAA 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA+VY I +DKV ++ +KTRMD
Sbjct: 181 SGWGAIVYTITKDKVNIKTIKTRMD 205
>gi|344299526|gb|EGW29879.1| hypothetical protein SPAPADRAFT_63501 [Spathaspora passalidarum
NRRL Y-27907]
Length = 206
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 148/202 (73%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGGS VAM GK+C+AIA D R G Q +++NF+KIF G ++GL GLATD T+
Sbjct: 5 FSINGGSAVAMVGKDCIAIASDLRLGNQSLGVSNNFEKIFGFGDKCFLGLTGLATDVLTL 64
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ RF+ NLY+L+E R + P+ L ++S+ LYERRFGPYFV P+V GL + +P I
Sbjct: 65 KETFRFKTNLYKLREERSIEPETLANLVSSTLYERRFGPYFVSPIVAGLGHKDNKPFICG 124
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D IGC++ DF+V G SDQLYGMCE+L+EP+LEP+ LFETI+QAL+NA +R+A+SGW
Sbjct: 125 FDSIGCIDFAKDFIVSGTASDQLYGMCESLYEPDLEPEQLFETISQALLNAVDRDALSGW 184
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GAVVYI+ +DKV R +KTR D
Sbjct: 185 GAVVYIVTKDKVVKRVLKTRQD 206
>gi|392562504|gb|EIW55684.1| N-terminal nucleophile aminohydrolase [Trametes versicolor
FP-101664 SS1]
Length = 208
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 150/208 (72%), Gaps = 3/208 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS++AM GK CVAIA D R G Q ++ NFQKIF + +Y+GLPGLATD
Sbjct: 1 MSIMEYNGGSVIAMVGKECVAIASDLRLGNQALGISSNFQKIFPMSDRIYLGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLD--PETA- 117
T+ + R+R N+Y +KE R++ P+ ++S+ LYE+RFGPYF+EP++ GL+ P A
Sbjct: 61 TTLKEVFRYRVNMYTIKEEREIEPETFAHLVSSTLYEKRFGPYFIEPVMAGLEKTPSGAY 120
Query: 118 EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACER 177
+P I DLIGC+N DFVV G S +LYG+ E LWEP+LEP+DLFET AQ L+NA +R
Sbjct: 121 KPFIAATDLIGCLNFAKDFVVAGTASTKLYGVAEGLWEPDLEPEDLFETCAQTLLNAVDR 180
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A SGWGA V++I +DKV R +K RMD
Sbjct: 181 DAYSGWGAEVHLITKDKVIKRTLKGRMD 208
>gi|68489003|ref|XP_711658.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
gi|46432977|gb|EAK92436.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
Length = 206
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/202 (54%), Positives = 147/202 (72%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGG+ VAM GK C+AI D R G Q +++NF+KIF VG ++GL GLATD ++
Sbjct: 5 FSINGGAAVAMIGKGCIAIGSDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVISL 64
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ RF+ NLY+L+E R + P L ++S+ LYERRFGP+FV P+V GL + +P I
Sbjct: 65 KELFRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFICG 124
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D IGC++ DF+V G SDQLYGMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGW
Sbjct: 125 FDSIGCIDFSHDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGW 184
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GAVVYI+ +DKV R +KTR D
Sbjct: 185 GAVVYIVTKDKVIKRVLKTRQD 206
>gi|406603265|emb|CCH45193.1| Proteasome component [Wickerhamomyces ciferrii]
Length = 210
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 155/204 (75%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
++ + GGS+VAM GK+CVAIA D R G Q L++ F+K++ G H+Y+GL GLATD
Sbjct: 8 NLFLFIGGSVVAMVGKDCVAIASDLRLGNQSLGLSNKFEKVYNYG-HVYLGLTGLATDAI 66
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
T+ + R++ NLY+L+E R++ P+ ++S+ LYE+RFGPYF+ P+V G++ T++P I
Sbjct: 67 TLSEVFRYKTNLYKLREERQIEPESFANLVSSTLYEKRFGPYFIGPVVAGINSITSKPFI 126
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
DLIGC++ DF+V G +DQLYGMCE+L+EP+LEP+DLFETI+QAL+NA +R+A+S
Sbjct: 127 CGFDLIGCIDFAKDFIVSGTATDQLYGMCESLYEPDLEPEDLFETISQALLNAADRDALS 186
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWG VVYII +DKV R++K+R D
Sbjct: 187 GWGGVVYIITKDKVVKRYLKSRQD 210
>gi|242808757|ref|XP_002485230.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
10500]
gi|218715855|gb|EED15277.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
10500]
Length = 206
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 145/199 (72%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK+CVAIACD R G+Q +++NF KIF Y+GL GLATD TV
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVTTVSDL 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ N+Y L+E R +SP+ L ++S+ LYERRFGPYFV P++ G++ T +P I D
Sbjct: 68 FRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGFDS 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+SGWGA
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAN 187
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|363752627|ref|XP_003646530.1| hypothetical protein Ecym_4692 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890165|gb|AET39713.1| hypothetical protein Ecym_4692 [Eremothecium cymbalariae
DBVPG#7215]
Length = 191
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 147/192 (76%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
MTGK+CVAIACD R G Q +++ F+KIF G H++VGL GLATD T+Y+ R++ NL
Sbjct: 1 MTGKDCVAIACDLRLGSQSLGVSNRFEKIFNYG-HVFVGLTGLATDVTTLYETFRYKTNL 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y+L+E+R + P ++S+ LYE+RFGPYFV P+V G+D + +P I DLIGC+ +
Sbjct: 60 YKLREDRPIEPSTFSHLVSSTLYEKRFGPYFVGPVVAGIDTISQKPYIAGFDLIGCIEES 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G S+QL+GMCE+L+EPNL +DLFETI+QAL+NA +R+A+SGWGAVVY+IE+D
Sbjct: 120 KDFIVSGTASEQLFGMCESLYEPNLGSEDLFETISQALLNAADRDALSGWGAVVYLIEKD 179
Query: 194 KVTVRHVKTRMD 205
KV R++KTR D
Sbjct: 180 KVVKRYLKTRQD 191
>gi|255950036|ref|XP_002565785.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592802|emb|CAP99170.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 206
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 146/199 (73%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK+CVAIACD R G+Q +++NF KIF Y+GL GLATD TV
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQSLTISNNFPKIFNYAPSTYLGLTGLATDVNTVSDL 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ N+Y L+E R ++P+ L ++S+ LYE+RFGPYFV P++ G++P T +P I D
Sbjct: 68 FRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVIAGINPTTGKPFICGFDS 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL++A +R+A+SGWGA
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLAPEDLFETISQALLSAVDRDALSGWGAQ 187
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 188 VYIIEKDKVTQRLLKGRQD 206
>gi|409083718|gb|EKM84075.1| hypothetical protein AGABI1DRAFT_110664 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201222|gb|EKV51145.1| 20S proteasome subunit beta 3 [Agaricus bisporus var. bisporus H97]
Length = 208
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 148/208 (71%), Gaps = 3/208 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS++AM GK+CVAIA D R G Q +++ NFQ++F V +Y+GLPGLATD
Sbjct: 1 MSIMEYNGGSVIAMAGKDCVAIASDLRLGNQMLSISSNFQRVFPVTDRIYIGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA--- 117
T+ ++ R R N+Y +KE R++ P+ ++S+ LYE RFGPYF+ P+V G+
Sbjct: 61 TTLRERFRLRVNMYTIKEEREIEPEAFTHLVSSTLYEHRFGPYFISPVVAGISKTPTGGI 120
Query: 118 EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACER 177
+P I DLIGC+N DFVV G S +L+G+ E LWEP+L P+DLFETI+Q L+NA +R
Sbjct: 121 KPFIAATDLIGCINFAKDFVVSGTASSKLFGVAEGLWEPDLGPEDLFETISQTLLNAVDR 180
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A SGWGAVV++I +D+V R +K RMD
Sbjct: 181 DAFSGWGAVVHVITKDQVITRKLKARMD 208
>gi|121706806|ref|XP_001271634.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
gi|119399782|gb|EAW10208.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 146/199 (73%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK+CVAIACD R G+Q +++NF KIF G ++GL GLATD TV
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTGLATDVNTVSDL 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
RF+ N+Y L+E R ++P+ L ++S+ LYERRFGP+FV P++ G++ T +P I D
Sbjct: 68 FRFKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGFDS 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL++A +R+A+SGWGA
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLSPEDLFETISQALLSAVDRDALSGWGAQ 187
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|47028283|gb|AAT09074.1| proteasome beta subunit [Bigelowiella natans]
Length = 204
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 151/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNG +IVAM GK+CVAIA D R+GIQ +A + +K+FQ+G +++GL GL TD
Sbjct: 1 MSILQYNGSAIVAMVGKDCVAIASDMRYGIQQQTIACDMKKVFQMGDKLFIGLSGLLTDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+ QK F+ +Y L+ENR M PKV +++S+ LYE+RFGPYFVEP+V GLD + P
Sbjct: 61 QTLKQKFDFKLKMYSLRENRPMRPKVFSSLVSSTLYEKRFGPYFVEPVVAGLDAKEG-PF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MDLIG DFVV G SD+LYG+CE W+PN+ PD+LFETI+Q+L+ A +R+ +
Sbjct: 120 IAAMDLIGAPVFAKDFVVSGTTSDELYGVCEAFWKPNMGPDELFETISQSLLAAVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+GWGA+V++I +D VT + +K+R D
Sbjct: 180 AGWGAIVHVITKDGVTTKQLKSRKD 204
>gi|83769195|dbj|BAE59332.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 203
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 147/200 (73%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+ VAM GK+CVAIACD R G+Q +++NF KIF ++GL GLATD TV
Sbjct: 4 HNGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYSPSTFLGLTGLATDVSTVSD 63
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
R++ N+Y L+E R ++P+ L ++S+ LYERRFGP+FV P+V G++ T +P I D
Sbjct: 64 LFRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGKPFICGFD 123
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
IGC++ DF+V G SDQL+G CE+LWEP+L P+DLFETI+QAL++A +R+A+SGWGA
Sbjct: 124 SIGCIDFAKDFIVSGTASDQLFGTCESLWEPDLAPEDLFETISQALLSAVDRDALSGWGA 183
Query: 186 VVYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 184 QVYIIEKDKVTKRLLKGRQD 203
>gi|452837699|gb|EME39641.1| hypothetical protein DOTSEDRAFT_75329 [Dothistroma septosporum
NZE10]
Length = 206
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 149/204 (73%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF K+F G +Y+GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKVFNYGPSLYLGLTGLATDVS 62
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
+V + R++ N+Y L+E R ++P+ ++S+ LYERRFGP+F+ P+V G++ T +P I
Sbjct: 63 SVSELFRYKVNMYRLREERDIAPQTFANLVSSSLYERRFGPWFISPVVAGINHTTGKPFI 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+S
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALS 182
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 183 GWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|425781832|gb|EKV19776.1| hypothetical protein PDIG_01170 [Penicillium digitatum PHI26]
gi|425782962|gb|EKV20840.1| hypothetical protein PDIP_12490 [Penicillium digitatum Pd1]
Length = 206
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 146/199 (73%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK+CVAIACD R G+Q +++NF KIF Y+GL GLATD TV
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTISNNFPKIFNYAPSTYLGLTGLATDVNTVSDL 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ N+Y L+E R ++P+ L ++S+ LYE+RFGPYFV P++ G++P T +P I D
Sbjct: 68 FRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVLAGINPTTGKPFICGFDS 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL++A +R+A+SGWGA
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLAPEDLFETISQALLSAVDRDALSGWGAQ 187
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 188 VYIIEKDKVTQRLLKGRQD 206
>gi|50309707|ref|XP_454865.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644000|emb|CAG99952.1| KLLA0E20197p [Kluyveromyces lactis]
Length = 205
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 155/199 (77%), Gaps = 1/199 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG +VAMTGK+CVAI CD R G Q +A+NF+KIF G H+++GL GLATD T+ +
Sbjct: 8 NGGIVVAMTGKDCVAIGCDLRLGSQSLGVANNFEKIFHYG-HVFLGLTGLATDVLTLSES 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ NLY+L+E+R + P+ ++S LYE+RFGPYFV P+V G++ ++ +P I DL
Sbjct: 67 FRYKTNLYKLREDRPIEPETFTQLVSTSLYEKRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC+++ DF+V G SDQL+GMCE+L+EPNLE DDLFETI+QAL+NA +R+A+SGWGAV
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEADDLFETISQALLNAADRDALSGWGAV 186
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYII++DKV +++KTR D
Sbjct: 187 VYIIKKDKVIKKYLKTRQD 205
>gi|347826593|emb|CCD42290.1| similar to proteasome subunit beta type-3 [Botryotinia fuckeliana]
Length = 212
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 149/210 (70%), Gaps = 6/210 (2%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIF G +Y+GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVS 62
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R +SP + ++S+ LYERRFGP+FV P+V GLD +T +P I
Sbjct: 63 TVSDLFRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLDQKTGKPFI 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNL------EPDDLFETIAQALVNAC 175
D IGC++ DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLLNSQIQGPEDLFETISQALLNAV 182
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+R+A+SGWGA VYIIE+DKVT R +K R D
Sbjct: 183 DRDALSGWGAHVYIIEKDKVTKRLLKGRQD 212
>gi|302764110|ref|XP_002965476.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
gi|302823097|ref|XP_002993203.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300138973|gb|EFJ05723.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300166290|gb|EFJ32896.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
Length = 204
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 152/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI TYNG ++VAM GK+C AIA D+R G+ +A +FQ+IF++ +YVGL GLA+D
Sbjct: 1 MSIFTYNGSALVAMVGKDCFAIASDRRLGVNFQTIATDFQRIFKIHDKLYVGLAGLASDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++++R NL++L+E R M P+ +S LYE+RFGPYFV+P++ GL + +P
Sbjct: 61 QTLYQRLKYRHNLFQLQEERDMRPETFSNFVSATLYEKRFGPYFVQPLIAGLGADN-KPY 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG + DFVVGG S+ LYG CE++++P++EP+DLFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDSIGAIEHSKDFVVGGTASESLYGACESMYKPDMEPEDLFETISQALISSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG +VY++ D+V VR +K RMD
Sbjct: 180 SGWGGIVYVVTPDQVIVRTLKGRMD 204
>gi|82802842|gb|ABB92465.1| rcPSMB3 [Pan troglodytes]
Length = 204
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 154/204 (75%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+I+AM GKNCVAIA D+ F IQ + +FQ+IF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNCVAIAADRHFRIQAQMVTTDFQEIFPMGGWLYIGLAGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q ++FR NLYELKE +++ P +M++N+LYE+ FGPY+ EP++ GLD +T +P
Sbjct: 61 QTVAQCLKFRLNLYELKEGQQIKPYTFTSMVANLLYEKHFGPYYTEPVIAGLDLKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
++DLIGC DFVV G ++Q+YGMCE+LWEPN++P+ LFETI+QA++NA + A
Sbjct: 121 RCSLDLIGCPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHLFETISQAMLNAMDWGAG 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRM 204
SG G +++I E++K+T R +K +M
Sbjct: 181 SGMGVIIHITEKNKITTRTLKAQM 204
>gi|29841419|gb|AAP06451.1| similar to NM_011971 proteasome (prosome, macropain) subunit, beta
type 3 in Mus musculus [Schistosoma japonicum]
Length = 209
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 145/184 (78%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ +NG +++ M+GK+C AIACD RFG+ ++ +F K++ +G +YVG PGLATD
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV+Q+++FR+N+YEL+ENR + P+ + M+SN+LYERRFGPYFVEP+V G+D T++P
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIGCV + +DFVV G C++Q+YGMCETLWE N++ +LFE I+Q ++NA R+A+
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAI 180
Query: 181 SGWG 184
SG G
Sbjct: 181 SGLG 184
>gi|395331331|gb|EJF63712.1| N-terminal nucleophile aminohydrolase [Dichomitus squalens LYAD-421
SS1]
Length = 208
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 151/208 (72%), Gaps = 3/208 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS++AM GK+CVAIA D R G Q ++ NFQKIF + + +++GLPGLATD
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQALGISSNFQKIFPMTNRIFLGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE---TA 117
T+ + R+R N++ +KE R++ P+ ++S+ LYERRFGP+F+EP++ GL +
Sbjct: 61 TTLKETFRYRVNMFTIKEEREIEPETFAHLVSSTLYERRFGPWFIEPVMAGLQKTHDGSY 120
Query: 118 EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACER 177
+P I DLIGC+N DFVV G S +L+G+ E LWEP+LEP+DLFETI+Q L+NA +R
Sbjct: 121 KPYIAATDLIGCLNFAKDFVVAGTASTKLFGVAEGLWEPDLEPEDLFETISQTLLNAVDR 180
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A SGWGA VY++ +DKV R +K RMD
Sbjct: 181 DAYSGWGAEVYVLTKDKVIKRTLKGRMD 208
>gi|164427141|ref|XP_964481.2| proteasome component PUP3 [Neurospora crassa OR74A]
gi|157071624|gb|EAA35245.2| proteasome component PUP3 [Neurospora crassa OR74A]
Length = 191
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 144/192 (75%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP+T EP I D IGC++
Sbjct: 60 YRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGEPFICGFDSIGCIDFA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G ++QL+GMCE LWEPNL P+DLFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 120 KDFIVSGTATEQLFGMCENLWEPNLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEKD 179
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|448536903|ref|XP_003871223.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis Co
90-125]
gi|380355579|emb|CCG25098.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis]
Length = 245
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 110/202 (54%), Positives = 147/202 (72%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGG+ VAM GK+CVAIA D R G Q +++NF+K+F+ G Y+ L GLATD T+
Sbjct: 44 FSINGGAAVAMIGKDCVAIASDLRLGSQSLGVSNNFEKVFEFGDKTYMALTGLATDVITL 103
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ +F+ NLY+L+E R + P L ++S+ LYERRFGP+FV P+V GL + +P I
Sbjct: 104 RELFKFKTNLYKLREERSIEPSTLANLVSSSLYERRFGPWFVGPIVAGLSSKDNKPFICG 163
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D IGC++ DF+V G +DQLYGMCE L+EPNLEP+DLFETI+QAL+NA +R+A+SGW
Sbjct: 164 FDSIGCIDYSHDFIVSGTATDQLYGMCEGLYEPNLEPEDLFETISQALLNAVDRDALSGW 223
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GAVVYII +DKV R +KTR D
Sbjct: 224 GAVVYIITKDKVVKRVLKTRQD 245
>gi|302683915|ref|XP_003031638.1| hypothetical protein SCHCODRAFT_15691 [Schizophyllum commune H4-8]
gi|300105331|gb|EFI96735.1| hypothetical protein SCHCODRAFT_15691 [Schizophyllum commune H4-8]
Length = 208
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 149/208 (71%), Gaps = 3/208 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS++AM GK+CVAIA D R G Q ++ +F+KIF V YVGL GLA+D
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQAQGISTHFEKIFPVTDRTYVGLAGLASDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA--- 117
T+ +K RFR N+Y +KE R++ P+ + S+ LYE RFGPYF+EP++ G+ +
Sbjct: 61 LTLREKFRFRVNMYTIKEEREIQPETFAHLASSTLYEHRFGPYFIEPVIAGMQKTPSGGY 120
Query: 118 EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACER 177
+P I DLIGC+N DFV+ G S++L+G+ E+LWEP+LEP+DLFETI+Q ++NA +R
Sbjct: 121 KPFIAAADLIGCLNFAKDFVLAGTASEKLFGVAESLWEPDLEPEDLFETISQTIMNAVDR 180
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A SGWG +V++I QDKV R +K RMD
Sbjct: 181 DAYSGWGCIVHVITQDKVITRTLKARMD 208
>gi|119175342|ref|XP_001239915.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303314835|ref|XP_003067426.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240107094|gb|EER25281.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320037775|gb|EFW19712.1| proteasome component PUP3 [Coccidioides posadasii str. Silveira]
gi|392870109|gb|EAS27268.2| proteasome component PUP3 [Coccidioides immitis RS]
Length = 206
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 148/199 (74%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK+CVAIACD R G+Q +++NF KIF Y+GL GLATD +V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVASVSDL 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R++ NLY L+E R+++P+ L ++S+ LYE+RFGP+FV P++ G++ T +P I D
Sbjct: 68 LRYKVNLYRLREERQIAPQTLANLVSSSLYEKRFGPWFVSPVLAGINHTTGKPFICGFDS 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF+V G SDQL+GMCE LWEP+L P+DLFETI+QAL+NA +R+A+SGWGA
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGMCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAH 187
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|238491746|ref|XP_002377110.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
gi|317146166|ref|XP_001821334.2| proteasome component PUP3 [Aspergillus oryzae RIB40]
gi|220697523|gb|EED53864.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
gi|391869220|gb|EIT78422.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Aspergillus oryzae 3.042]
Length = 206
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 146/199 (73%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK+CVAIACD R G+Q +++NF KIF ++GL GLATD TV
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYSPSTFLGLTGLATDVSTVSDL 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ N+Y L+E R ++P+ L ++S+ LYERRFGP+FV P+V G++ T +P I D
Sbjct: 68 FRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGKPFICGFDS 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF+V G SDQL+G CE+LWEP+L P+DLFETI+QAL++A +R+A+SGWGA
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGTCESLWEPDLAPEDLFETISQALLSAVDRDALSGWGAQ 187
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|388852079|emb|CCF54255.1| probable PUP3-20S proteasome subunit beta3 [Ustilago hordei]
Length = 204
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 148/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS+VA GKNCV IA D R G Q +A NF K+F+V Y+GLPGLA+D
Sbjct: 1 MSIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYIGLPGLASDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ +K R+R N+Y++KE R + P+V ++S+ LYERRFGPYF+EP++ G++ + EP
Sbjct: 61 TTLREKFRYRVNMYKMKEERDIEPEVFAQLVSSTLYERRFGPYFIEPVIAGINSKN-EPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I D++GC+N DFVV G D+L+GM E LWEP+L P++LFET++Q L+ A ER+A+
Sbjct: 120 IAASDVVGCLNFAKDFVVSGTAGDKLFGMAEGLWEPDLGPEELFETVSQILLGALERDAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA+V II +KV R +K RMD
Sbjct: 180 SGWGAIVRIITPEKVIERTLKARMD 204
>gi|407921624|gb|EKG14765.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 205
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 149/204 (73%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIF G +Y+GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFSYG-DVYLGLTGLATDVS 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R +SP+ + ++S+ LYERRFGPYFV P++ G++ T +P I
Sbjct: 62 TVADLFRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFVSPVIAGINQTTGKPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G SDQL+G CE LWEP+L P+DLFET++QAL+NA +R+A+S
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETVSQALLNAVDRDALS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 182 GWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|302829446|ref|XP_002946290.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
nagariensis]
gi|300269105|gb|EFJ53285.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
nagariensis]
Length = 204
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 148/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI +YNG +IVAM GK CVAI D RFG+Q ++ + K+F++ +Y+GL GL TD
Sbjct: 1 MSIFSYNGSAIVAMAGKECVAIGSDLRFGVQYQTISCDTPKVFKIHDKLYLGLSGLLTDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT++QK+ FR NLY+L+E R M P M+SN LYERRFGPYF P+V GL+P+ P
Sbjct: 61 QTLHQKLLFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAAPVVAGLEPD-GTPY 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MD IG + DF++GG + LYGMCE++W P++EP++LFET+AQ L++ +R+A+
Sbjct: 120 LSGMDTIGAIETAKDFMIGGTSPESLYGMCESMWRPDMEPEELFETVAQCLMSGFDRDAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+GWGAV+++I +DKV R +KTRMD
Sbjct: 180 AGWGAVIHVITKDKVITRTLKTRMD 204
>gi|299756258|ref|XP_002912180.1| proteasome subunit beta type 3 [Coprinopsis cinerea okayama7#130]
gi|298411595|gb|EFI28686.1| proteasome subunit beta type 3 [Coprinopsis cinerea okayama7#130]
Length = 205
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 149/205 (72%), Gaps = 3/205 (1%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M +NGGS++AM GK+CVAIA D R G Q +A +FQ++F + +Y+GLPGLATD T+
Sbjct: 1 MDHNGGSVIAMLGKDCVAIASDLRLGNQALGIASDFQRVFPMTDRIYLGLPGLATDVATL 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA---EPI 120
+++ RFR N+Y +KE R++ P+V ++S+ LYERRFGPYF EP++ G+ +P
Sbjct: 61 HERFRFRVNMYTIKEGREIEPEVFAHLVSSTLYERRFGPYFCEPVMAGISKTPTGKIKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I DLIGC+N DFVV G S +LYG+ E LWEP+LEP+DLFETI+Q ++NA +R+A
Sbjct: 121 IAATDLIGCLNYAKDFVVAGTASAKLYGVAEGLWEPDLEPEDLFETISQTMLNAVDRDAF 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV+++ +DKV R +K RMD
Sbjct: 181 SGWGAVVHVLTKDKVITRTLKGRMD 205
>gi|384248553|gb|EIE22037.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 205
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 149/205 (72%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG +IVAM GK CVAI D RFG+Q LA +++K++++ +++GL GL TD
Sbjct: 1 MSIFEYNGAAIVAMAGKECVAIGSDLRFGVQFQTLATDYKKVYKIHDKLFIGLAGLGTDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT++QK++FR NLY+L+E R + P ++S+MLYE+RFGPYFV P++ GL+ +T P
Sbjct: 61 QTMHQKLKFRHNLYKLREERNIKPSTFGELVSSMLYEKRFGPYFVSPVIAGLEDKTNVPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG + +DF+V G D LYGMCE+++ P++EP++LFET+ Q L++ +R+A+
Sbjct: 121 ICGMDTIGAIETANDFMVAGTAPDSLYGMCESMFRPDMEPEELFETVTQCLMSGADRDAL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA+VY+I +D V R +K RMD
Sbjct: 181 SGWGAIVYVITKDAVVARTLKGRMD 205
>gi|389742559|gb|EIM83745.1| 20S proteasome subunit beta 3 [Stereum hirsutum FP-91666 SS1]
Length = 213
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 150/213 (70%), Gaps = 8/213 (3%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS+VAM GK+CVAIA D R G Q +A NF+K+F V +Y+GLPGLATD
Sbjct: 1 MSIMQYNGGSVVAMVGKDCVAIASDLRLGNQALTVATNFEKVFPVTDRIYLGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLD--PETA- 117
T+ ++ RFR N+Y +KE+R++ P ++S+ LYE RFGPYF+EP++ GL+ P +
Sbjct: 61 TTLRERFRFRVNMYTIKESREIQPSTFAHLVSSTLYEHRFGPYFIEPVIAGLERLPTSTD 120
Query: 118 -----EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALV 172
EP I DLIGC+N DFVV G SD+L+G E LWE ++ P++LFE I+Q L+
Sbjct: 121 EEPKFEPFIAATDLIGCLNFAKDFVVAGTASDKLFGCAEGLWEEDMNPEELFECISQTLL 180
Query: 173 NACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
NA +R+A SGWGAVV++I +DKV R +K RMD
Sbjct: 181 NAVDRDAYSGWGAVVHVITKDKVVTRMLKGRMD 213
>gi|451848501|gb|EMD61806.1| hypothetical protein COCSADRAFT_38618 [Cochliobolus sativus ND90Pr]
Length = 205
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 150/204 (73%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYG-DVFLGLTGLATDVS 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R +SP+ + ++S+ LYERRFGPYF+ P++ G++ + +P I
Sbjct: 62 TVSDLFRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFISPVIAGINQTSGKPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+S
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 182 GWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|225710512|gb|ACO11102.1| Proteasome subunit beta type-3 [Caligus rogercresseyi]
Length = 205
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 146/205 (71%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS+ T NG ++VAM GK+CVAIA D RFG + +F K F++G +YVGL GLATD
Sbjct: 1 MSVFTINGSAVVAMKGKDCVAIASDLRFGSNLHTIMTDFPKTFEMGPGLYVGLAGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV+QK+ FR+ ++EL+E R+M PK M+S++LYERRFGP+FV P+V G D +P
Sbjct: 61 QTVHQKLTFRKKMFELREGRQMRPKTFSEMLSSLLYERRFGPFFVNPIVAGYDYVENKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MDLIG P DFV G D L GMCE LW ++ PD+LFE I+QAL+N+ +R+++
Sbjct: 121 ISGMDLIGASTIPEDFVASGTSEDSLVGMCEALWFEDMSPDELFEAISQALMNSFDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+GWGA V+IIE+ +VT R +KTRMD
Sbjct: 181 AGWGAEVHIIEKHQVTTRRLKTRMD 205
>gi|159476310|ref|XP_001696254.1| hypothetical protein CHLREDRAFT_187099 [Chlamydomonas reinhardtii]
gi|158282479|gb|EDP08231.1| predicted protein [Chlamydomonas reinhardtii]
Length = 204
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 147/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI +YNG +IVAM GK CVAI D RFG+Q + + K++++ +Y+GL GL TD
Sbjct: 1 MSIFSYNGAAIVAMAGKECVAIGSDLRFGVQLQTMTCDTPKVYKIHDKLYLGLSGLQTDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T++QK++FR NLY+L+E R M P M+SN LYERRFGPYF P+V GL+P+ P
Sbjct: 61 TTLHQKLQFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAAPVVAGLEPD-GTPY 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MD IG + DF++ G + LYGMCE++W P++EPD+LFET+AQ L++ C+R+A+
Sbjct: 120 LCGMDTIGAIESAKDFMITGTSPESLYGMCESMWRPDMEPDELFETVAQCLMSGCDRDAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+GWGAVV++I +DKV R +KTRMD
Sbjct: 180 AGWGAVVHVITKDKVVSRTLKTRMD 204
>gi|340520586|gb|EGR50822.1| 20S proteasome, beta subunit [Trichoderma reesei QM6a]
Length = 191
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTISNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP+T P I D IGC++
Sbjct: 60 YRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGAPFICGFDSIGCIDFA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G S+QL+GMCE LWEP+LEPD LFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 120 KDFIVSGTASEQLFGMCEGLWEPDLEPDALFETISQALLNAVDRDALSGWGAHVYIIEKD 179
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|164660346|ref|XP_001731296.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
gi|159105196|gb|EDP44082.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
Length = 201
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 144/202 (71%), Gaps = 1/202 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M YNGGS++AMTGKNCVAIA D R G Q L+ F K+F++ YVGLPGLATD T+
Sbjct: 1 MEYNGGSVIAMTGKNCVAIASDLRLGNQALLLSTQFDKVFRMTDRTYVGLPGLATDVATL 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+K R+R N+Y +KE+R + P+ ++S+ LYERRFGPYF+EP+V G++ EP I
Sbjct: 61 REKFRYRLNMYRMKEDRDIEPETFAKLMSSTLYERRFGPYFIEPVVAGMNSNN-EPFIAA 119
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
DLIGC+N DFVV G SD+L+GM E LWEP+LEP+DLFETI+Q ++ ER+A+SG
Sbjct: 120 SDLIGCLNFAKDFVVSGTASDRLFGMAEGLWEPDLEPEDLFETISQTMLGGIERDALSGM 179
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
G +V II DKV R +K RMD
Sbjct: 180 GVIVRIITPDKVIERTLKCRMD 201
>gi|225710324|gb|ACO11008.1| Proteasome subunit beta type-3 [Caligus rogercresseyi]
Length = 205
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 146/205 (71%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS+ T NG ++VAM GK+CVAIA D RFG + +F K F++G +YVGL GLATD
Sbjct: 1 MSVFTINGSAVVAMKGKDCVAIASDLRFGSNLHTIMTDFPKTFEMGPGLYVGLAGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV+QK+ FR+ ++EL+E R+M PK M+S++LYERRFGP+FV P+V G D +P
Sbjct: 61 QTVHQKLTFRKKMFELREGRQMRPKTFSEMLSSLLYERRFGPFFVNPIVAGYDYVENKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MDLIG P DFV G D L GMCE LW ++ PD+LFE I+QAL+N+ +R+++
Sbjct: 121 ISGMDLIGASTIPEDFVASGTSEDTLVGMCEALWFEDMSPDELFEAISQALMNSFDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+GWGA V+IIE+ +VT R +KTRMD
Sbjct: 181 AGWGAEVHIIEKHQVTTRRLKTRMD 205
>gi|323508047|emb|CBQ67918.1| probable PUP3-20S proteasome subunit beta3 [Sporisorium reilianum
SRZ2]
Length = 204
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS+VA GKNCV IA D R G Q +A NF K+F+V YVGLPGLA+D
Sbjct: 1 MSIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYVGLPGLASDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ ++ R+R N+Y++KE R + P++ ++S+ LYERRFGPYF+EP++ G++ + EP
Sbjct: 61 ATLKERFRYRVNMYKMKEERDIEPEIFAHLVSSTLYERRFGPYFIEPVIAGINSKN-EPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I D++GC+N DFVV G +D+L+GM E LWEP+L P++LFET++Q L+ A ER+A+
Sbjct: 120 IAASDVVGCLNFAKDFVVSGTAADKLFGMAEGLWEPDLGPEELFETVSQILLGALERDAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA+V +I +KV R +K RMD
Sbjct: 180 SGWGAIVRVITPNKVIERTLKARMD 204
>gi|219126883|ref|XP_002183677.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404914|gb|EEC44859.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 204
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 153/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNG +++AM GK+CV IA D+R G+Q +A +F K+F +G YVGL GLATD
Sbjct: 1 MSILEYNGAAMIAMAGKDCVGIAADRRLGVQLQTVATDFNKVFAMGPKSYVGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+ + FR+NLYELKE R+MSP L ++S +LYE+RFGPYFVEP+V GL+ E +P
Sbjct: 61 QTLKNILEFRKNLYELKEEREMSPATLSHLLSTLLYEKRFGPYFVEPIVAGLN-EKNKPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIG Q DFVV G C+ LYGMCE+L+ P+LEP++LFETIAQAL+++ +R+A+
Sbjct: 120 LSAMDLIGAPVQADDFVVSGTCTGNLYGMCESLYRPDLEPEELFETIAQALLSSVDRDAI 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VV+II +D VT + +K R D
Sbjct: 180 SGWGGVVHIITKDGVTTKELKGRQD 204
>gi|213409155|ref|XP_002175348.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
gi|212003395|gb|EEB09055.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
Length = 204
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS +AM GK CVAIA D R G Q +L +NF KIF + Y+GL GLATD
Sbjct: 1 MSIMEYNGGSCIAMVGKECVAIASDLRLGAQSVSLTNNFPKIFSMTEKTYLGLTGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+++ R++ N+Y+L+E R++ PK ++S+ LYE+RF PYF P+V GL +T EP
Sbjct: 61 QTLHELFRYKINMYKLREERQIEPKTFANLVSSTLYEKRFAPYFTFPIVAGL-SKTNEPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I D IGC++ DF V G SD LYG+CE L+EP+LEP+DLFETI+QAL+NA +R+ +
Sbjct: 120 ICGFDSIGCIDFAKDFAVSGTASDHLYGICEDLYEPDLEPEDLFETISQALLNAIDRDCI 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VVY+I +DK R VK R D
Sbjct: 180 SGWGCVVYVISKDKCMKRLVKGRQD 204
>gi|189205423|ref|XP_001939046.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975139|gb|EDU41765.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 205
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 150/204 (73%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + NGG+ VAM GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYG-DVFLGLTGLATDVS 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R +SP+ + ++S+ LYE+RFGPYF+ P++ G++ + +P I
Sbjct: 62 TVSDLFRYKVNMYRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+S
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 182 GWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|342890397|gb|EGU89215.1| hypothetical protein FOXB_00168 [Fusarium oxysporum Fo5176]
Length = 191
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 144/192 (75%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVNTVSDLFRYKVNM 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP+T +P I D IGC++
Sbjct: 60 YRLREERSIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G S+QL+GMCE LWEP+LEPD LFETI+Q+L+NA +R+A+SGWGA VYIIE+D
Sbjct: 120 KDFIVSGTASEQLFGMCEGLWEPDLEPDALFETISQSLLNAVDRDALSGWGAHVYIIEKD 179
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|116181896|ref|XP_001220797.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185873|gb|EAQ93341.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 192
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 143/192 (74%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF K+FQ G ++++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKVFQYGENVFLGLTGLATDVSTVSDLFRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP T P I D IGC++
Sbjct: 61 YRLREERHIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPTTGAPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G ++QL+GMCE+LWEP++ PD LFETI+Q+L+NA +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTATEQLFGMCESLWEPDMGPDALFETISQSLLNAVDRDALSGWGAHVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|440804462|gb|ELR25339.1| 20S proteasome subunit beta 3, putative [Acanthamoeba castellanii
str. Neff]
Length = 192
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 140/192 (72%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
MTGKNCVAIACDKRFGIQ LA N K+ Q+ S +VGL GL +D QT++ + +FR NL
Sbjct: 1 MTGKNCVAIACDKRFGIQHQTLAFNMPKVKQLNSKTFVGLSGLVSDAQTLFNRFQFRHNL 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y+L+ENR+M P+ ++S MLYE+RFGPYFVEP++ GL +P I MDLIG
Sbjct: 61 YKLRENREMDPETFANLVSTMLYEKRFGPYFVEPVICGLSGPDNKPFIAAMDLIGAPLLA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
D VV G CS+ LYGM E+LW+P+LEPDDLFETI+Q L++A R+A SGWGAVVYI+ D
Sbjct: 121 KDSVVAGTCSEALYGMTESLWKPDLEPDDLFETISQVLLSAVNRDAFSGWGAVVYIMTPD 180
Query: 194 KVTVRHVKTRMD 205
+V + +K RMD
Sbjct: 181 EVITKEIKCRMD 192
>gi|302411392|ref|XP_003003529.1| proteasome component PUP3 [Verticillium albo-atrum VaMs.102]
gi|261357434|gb|EEY19862.1| proteasome component PUP3 [Verticillium albo-atrum VaMs.102]
Length = 191
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 145/192 (75%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTVGDLFRYKSNM 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP+T +P I D IGC++
Sbjct: 60 YRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G S+QL+GMCE+LWEP+L PD+LFETI+Q+L+NA +R+A+SGWGA VYIIE+D
Sbjct: 120 KDFIVSGTASEQLFGMCESLWEPDLGPDELFETISQSLLNAVDRDALSGWGAHVYIIEKD 179
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|451992642|gb|EMD85122.1| hypothetical protein COCHEDRAFT_1149474 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 150/204 (73%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S + +GG+ VAM GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD
Sbjct: 3 SPFSIDGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYG-DVFLGLTGLATDVS 61
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV R++ N+Y L+E R +SP+ + ++S+ LYERRFGPYF+ P++ G++ + +P I
Sbjct: 62 TVSDLFRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFISPVIAGINQTSGKPFI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IGC++ DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+S
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VYIIE+DKVT R +K R D
Sbjct: 182 GWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|440463429|gb|ELQ33009.1| proteasome component PUP3 [Magnaporthe oryzae Y34]
gi|440481325|gb|ELQ61924.1| proteasome component PUP3 [Magnaporthe oryzae P131]
Length = 192
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 143/192 (74%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF S +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFSYSSSVFLGLTGLATDVATVSDLFRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GL+P+T P I D IGC++
Sbjct: 61 YRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLEPKTGAPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G S+QL+GMCE+LWEP+L P+DLFETI+QAL++A +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTASEQLFGMCESLWEPDLGPEDLFETISQALLSAVDRDALSGWGAHVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|145256886|ref|XP_001401548.1| proteasome component PUP3 [Aspergillus niger CBS 513.88]
gi|134058458|emb|CAL00667.1| unnamed protein product [Aspergillus niger]
gi|358366039|dbj|GAA82660.1| proteasome component Pup3 [Aspergillus kawachii IFO 4308]
Length = 206
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 146/199 (73%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK+CVAIACD R G+Q +++NF KIF G ++GL GLATD TV
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTGLATDVSTVSDL 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ N+Y L+E R ++P+ L ++S+ LYE+RFGP+FV P++ G++ T +P I D
Sbjct: 68 FRYKVNMYRLREERNIAPQTLANLVSSSLYEKRFGPFFVSPVIAGINSTTGKPFICGFDS 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF+V G S+QL+G CE LWEP+L P+DLFETI+QAL++A +R+A+SGWGA
Sbjct: 128 IGCIDFAKDFIVSGTASEQLFGTCEGLWEPDLSPEDLFETISQALLSAVDRDALSGWGAQ 187
Query: 187 VYIIEQDKVTVRHVKTRMD 205
VYIIE+DKVT R +K R D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|261201474|ref|XP_002627137.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
gi|239592196|gb|EEQ74777.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
gi|239611645|gb|EEQ88632.1| proteasome component Pup3 [Ajellomyces dermatitidis ER-3]
gi|327348342|gb|EGE77199.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 192
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 139/192 (72%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF Y+GL GLATD TV +RF+ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSTVSDVLRFKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R +SPK L + S+ LYE+RFGPYFV P++ G+D T +P I D IGC++
Sbjct: 61 YRLREERHISPKTLANLTSSTLYEKRFGPYFVSPVLAGIDNTTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+G CE LWEP+L PDDLFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 121 QDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|393911865|gb|EFO27070.2| proteasome subunit beta type-3 [Loa loa]
Length = 205
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 147/205 (71%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+Y+GG+I+AM G +CV IA D R G Q T +A N +K+ ++G +Y+GL G +D
Sbjct: 1 MSIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFHSDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
+TV KI FR+NLYEL+ENRK+ P+V M+SN+LY+ RFG YF EP++ GLDP T +P
Sbjct: 61 KTVLDKITFRKNLYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IGC++ P+DFV G ++ L G+CE W+ + D+LFE AQ++++A ER+A
Sbjct: 121 ICAMDTIGCISAPNDFVAVGTGTEYLLGVCEGFWKEGMNSDELFEATAQSMLSAMERDAA 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG +VY I +DKV V+ +K RMD
Sbjct: 181 SGWGVIVYTITKDKVNVKTIKARMD 205
>gi|393222969|gb|EJD08453.1| 20S proteasome subunit beta 3 [Fomitiporia mediterranea MF3/22]
Length = 205
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 148/205 (72%), Gaps = 3/205 (1%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M YNGGS+VAM GK+CVAIA D R G+Q +A N +K+F V +Y+GL GLATD T+
Sbjct: 1 MQYNGGSVVAMVGKDCVAIASDLRLGMQALTVACNHEKVFPVTDRIYLGLAGLATDVATL 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE---TAEPI 120
++ R+R N+Y +KE R +SP+ ++S+ LYE+RFG YFVEP++ G+ A+P
Sbjct: 61 RERFRYRVNMYTIKEERDISPETFARLVSSTLYEKRFGNYFVEPVIAGMGTAPNGKAQPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I D+IGC+N DFVV G SD+L+G+ E LWEP+LEP+DLFETI+Q L+NA +R+A
Sbjct: 121 IAAADVIGCLNFAKDFVVVGTASDKLFGVAEGLWEPDLEPEDLFETISQTLLNAVDRDAF 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV++I QDKV R +K RMD
Sbjct: 181 SGWGAVVHVITQDKVITRTLKGRMD 205
>gi|405971643|gb|EKC36468.1| Proteasome subunit beta type-3 [Crassostrea gigas]
Length = 161
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 136/161 (84%)
Query: 45 VGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF 104
+G +Y+GLPGLATD QTV+Q+++FR NLYEL+ENR++ PK L+M+SN+LYERRFGPYF
Sbjct: 1 MGPRLYIGLPGLATDVQTVHQRLQFRLNLYELRENRRIKPKTFLSMVSNLLYERRFGPYF 60
Query: 105 VEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLF 164
VEP++ GLDP+T EP I +MDLIGC DFVV G CS+Q+YGMCE++WEPN++P +LF
Sbjct: 61 VEPVIAGLDPKTFEPFIASMDLIGCPMVTDDFVVSGTCSEQMYGMCESVWEPNMDPQELF 120
Query: 165 ETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
E+I+QAL+NA +R+AVSGWG +V+IIE+D+VT +K RMD
Sbjct: 121 ESISQALLNAVDRDAVSGWGGIVHIIEKDQVTTTELKGRMD 161
>gi|378725424|gb|EHY51883.1| proteasome component PUP3 [Exophiala dermatitidis NIH/UT8656]
Length = 192
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 142/192 (73%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF G +Y+GL GLATD QTV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFTYGPSVYLGLTGLATDVQTVSDTFRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R +SP+ L ++S+ LYERRFGP+FV P++ G++ T +P I D IGC++
Sbjct: 61 YRLREERNISPQTLANLVSSSLYERRFGPWFVSPVLAGINHTTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVAGTASDQLFGTCEGLWEPDLSPEDLFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|46108708|ref|XP_381412.1| hypothetical protein FG01236.1 [Gibberella zeae PH-1]
gi|408398859|gb|EKJ77985.1| hypothetical protein FPSE_01773 [Fusarium pseudograminearum CS3096]
Length = 191
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 144/192 (75%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q ++++F KIFQ G +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNDFPKIFQYGD-VFLGLTGLATDVNTVSDLFRYKVNM 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP+T +P I D IGC++
Sbjct: 60 YRLREERDIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G S+QL+GMCE LWEP+LEPD LFETI+Q+L+NA +R+A+SGWGA VYIIE+D
Sbjct: 120 KDFIVSGTASEQLFGMCEGLWEPDLEPDALFETISQSLLNAVDRDALSGWGAHVYIIEKD 179
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|345567463|gb|EGX50395.1| hypothetical protein AOL_s00076g159 [Arthrobotrys oligospora ATCC
24927]
Length = 205
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 149/202 (73%), Gaps = 1/202 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
T NGG+ +AM GK+CVAIACD R G Q L++NF KIF G +++GL GLATD QT+
Sbjct: 5 FTLNGGACLAMAGKDCVAIACDLRLGQQALTLSNNFPKIFNYGD-VFLGLTGLATDVQTM 63
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ R++ NLY L+E R++ P+ + ++S+ LYERRFGPYFV P+V G++ T +P I
Sbjct: 64 HSLFRYKVNLYRLREEREIEPETMANLVSSSLYERRFGPYFVSPVVAGINQRTGKPFICG 123
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D IGC++ DF+V G SDQL+G+ E LWEP+LEP+DLFET++Q L+N+ +R+A++GW
Sbjct: 124 FDSIGCIDFAKDFIVSGTASDQLFGVAEGLWEPDLEPEDLFETVSQTLLNSLDRDALAGW 183
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GA VYII +DKVT R ++TR D
Sbjct: 184 GAHVYIITKDKVTKRLLRTRQD 205
>gi|301110580|ref|XP_002904370.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
gi|262096496|gb|EEY54548.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
Length = 204
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 153/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI++YNG +I+AM GK+CV IACD R G+Q +A +FQK+F+V ++GL GLATD
Sbjct: 1 MSILSYNGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q+V Q ++F+ N+Y++ E R + PK L A++SNM+YE+RFGP+FVEP++ GL E +P
Sbjct: 61 QSVSQLLKFKINMYKMNEERDIKPKTLSALLSNMMYEKRFGPWFVEPVIAGL-TEDNKPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ +MD +GC DFVV G + LYGMCE++++P++E +DLFET++Q L++AC R+A+
Sbjct: 120 LSSMDCLGCEMMTKDFVVAGTMEEALYGMCESMYKPDMEEEDLFETLSQCLLSACNRDAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV+II +T + +++R D
Sbjct: 180 SGWGAVVHIITPKGITSKKLQSRQD 204
>gi|403214964|emb|CCK69464.1| hypothetical protein KNAG_0C03600 [Kazachstania naganishii CBS
8797]
Length = 205
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 154/201 (76%), Gaps = 1/201 (0%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
+ NGG VAM GK+CVAIACD R G Q +++NF+KIF G H+++G+ GLATD T+
Sbjct: 6 SINGGICVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFHYG-HVFMGMTGLATDVLTLS 64
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
R++ NLY+L+E+R + P+ ++S+ LYERRFGPYFV P+V G++ +T +P I
Sbjct: 65 DVFRYKTNLYKLREDRMIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKTGKPFIAGF 124
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
DLIGC+++ DF+V G SDQL+GMCE+L+EPNLE DDLFETI+QAL+NA +R+A+SGWG
Sbjct: 125 DLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEADDLFETISQALLNAADRDALSGWG 184
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
AVVYII++DKV +++K R D
Sbjct: 185 AVVYIIKKDKVIKKNLKMRQD 205
>gi|348667371|gb|EGZ07196.1| hypothetical protein PHYSODRAFT_288866 [Phytophthora sojae]
Length = 204
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI++YNG +I+AM GK+CV IACD R G+Q +A +FQK+F+V ++GL GLATD
Sbjct: 1 MSILSYNGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q+V Q ++F+ N+Y++ E R++ PK L A++S+M+YE+RFGP+FVEP++ GL E +P
Sbjct: 61 QSVSQLLKFKLNMYKMNEEREIKPKTLSALLSSMMYEKRFGPWFVEPVIAGL-TEDNKPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ +MD +GC DFVV G + LYGMCE++++P++E +DLFET++Q L++AC R+A+
Sbjct: 120 LSSMDCLGCEMMTKDFVVAGTMEEALYGMCESMYKPDMEEEDLFETLSQCLLSACNRDAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV+II +T + +++R D
Sbjct: 180 SGWGAVVHIITPKGITSKKLQSRQD 204
>gi|154279074|ref|XP_001540350.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
gi|150412293|gb|EDN07680.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
gi|225562334|gb|EEH10613.1| proteasome component PUP3 [Ajellomyces capsulatus G186AR]
Length = 192
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 141/192 (73%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF Y+GL GLATD +V +R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R++SP+ L +IS+ LYE+RFGPYFV P++ G++ T +P I D IGC++
Sbjct: 61 YRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+G CE LWEP+L PDDLFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|429858056|gb|ELA32890.1| proteasome component pup3 [Colletotrichum gloeosporioides Nara gc5]
Length = 191
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 144/192 (75%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTVGDLFRYKVNM 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P ++S+ LYERRFGPYFV P+V GLDP+T +P I D IGC++
Sbjct: 60 YRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G S+QL+GMCE+LWEP+L P++LFETI+Q+L+NA +R+A+SGWGA VYIIE+D
Sbjct: 120 KDFIVSGTASEQLFGMCESLWEPDLGPEELFETISQSLLNAVDRDALSGWGAHVYIIEKD 179
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|225719470|gb|ACO15581.1| Proteasome subunit beta type-3 [Caligus clemensi]
Length = 205
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 148/205 (72%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS+ + NG ++VAM GK+CV IA D RFG + +F K F++G+ +YVGL GLATD
Sbjct: 1 MSVFSINGSAVVAMKGKDCVGIASDLRFGSDRHTIMTDFPKTFEMGAGLYVGLAGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV+QK+ FR+ ++EL+E R+M PK M+S++LYERRFGP+FV P+V G D +P
Sbjct: 61 QTVHQKLNFRKKMFELREGRQMRPKTFSEMLSSLLYERRFGPFFVNPVVAGWDFVENKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I +MDLIG + P DFV G + L GMCE LW ++ D+LFE I+QAL+N+ +R+++
Sbjct: 121 ISSMDLIGAMTVPKDFVAVGTSENSLMGMCEALWFEDMNKDELFEAISQALMNSFDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+GWGA V+IIE+++VT R +KTRMD
Sbjct: 181 AGWGAEVHIIEKNQVTTRRLKTRMD 205
>gi|290993280|ref|XP_002679261.1| predicted protein [Naegleria gruberi]
gi|284092877|gb|EFC46517.1| predicted protein [Naegleria gruberi]
Length = 205
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 148/205 (72%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNG IVAMTGKNCVAIA D R+GI+ + + QKIF++ +++GL GLATD
Sbjct: 1 MSILEYNGAGIVAMTGKNCVAIAADTRYGIRQQTVGTDMQKIFKIHDKLFIGLNGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV +K++FR N+Y LKE R + P ++SN+LYE+RFGP+F+EP++ GL+ +P
Sbjct: 61 QTVNEKLKFRMNMYNLKEERDIKPSSFANLMSNILYEKRFGPWFIEPVIAGLEGPENKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I DLIG +FVV G CS+ LYGMCE+L++P++EP+DLFE I+Q L+ A +R+ +
Sbjct: 121 ICAQDLIGAPCFTDNFVVSGTCSEALYGMCESLYKPDMEPEDLFEVISQCLLAAVDRDCI 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV++I D +T + +K R D
Sbjct: 181 SGWGAVVHVITPDSITTKRLKVRQD 205
>gi|225713992|gb|ACO12842.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
gi|290463059|gb|ADD24577.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
Length = 205
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 144/205 (70%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS+ T NG +++AM G +CV+IA D RFGI + +F K F++G ++VGL GLATD
Sbjct: 1 MSVFTINGSAVLAMKGNDCVSIASDLRFGINRHTVMTDFPKTFEMGPGLFVGLAGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV QK+ FR ++EL+E RKM P M+S++LYERRFGP+FV P+V G D +P
Sbjct: 61 QTVQQKLNFRMKMFELREGRKMRPNTFSTMLSHLLYERRFGPFFVNPIVAGYDYVENKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I +MDLIG + P DFV G D L GMCE LW N+ P++LFE +QA++N+ +R+++
Sbjct: 121 ISSMDLIGAITIPEDFVAAGTSEDSLMGMCEALWFENMNPEELFEATSQAIMNSFDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+GWGA V+IIE+ +VT R +KTRMD
Sbjct: 181 AGWGAEVHIIEKHQVTTRRIKTRMD 205
>gi|225680862|gb|EEH19146.1| proteasome subunit beta type-3 [Paracoccidioides brasiliensis Pb03]
gi|226292563|gb|EEH47983.1| proteasome component PUP3 [Paracoccidioides brasiliensis Pb18]
Length = 192
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 141/192 (73%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF Y+GL GLATD TV +RF+ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSTVSDVLRFKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R++SP+ L ++S+ LYE+RFGPYFV P++ G++ T EP I D IGC++
Sbjct: 61 YRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGEPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G S+QL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTASEQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|443927308|gb|ELU45815.1| 20S proteasome subunit beta 3 [Rhizoctonia solani AG-1 IA]
Length = 415
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 108/201 (53%), Positives = 144/201 (71%), Gaps = 11/201 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM NGGS++AM GKNCVAIA D R G Q +A NF+KIF V +YVGLPGLATD
Sbjct: 1 MSIMQLNGGSVIAMAGKNCVAIASDLRLGNQALTVACNFEKIFPVTDRLYVGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDP-ETAEP 119
T+ +++RFR N+Y +KE R++ PK ++S+ LYERRFGP+F+EP++ GL P +P
Sbjct: 61 LTLRERLRFRVNMYTMKEEREIQPKAFAHLVSSTLYERRFGPFFIEPVIAGLTPGPDPKP 120
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNL----------EPDDLFETIAQ 169
I DLIGC+ P DFVV G SD+L+G+ E+LWEP+L EP+DLFETI+Q
Sbjct: 121 FIAATDLIGCLTLPDDFVVSGTASDKLFGVAESLWEPDLVRRHDAPVLTEPEDLFETISQ 180
Query: 170 ALVNACERNAVSGWGAVVYII 190
L+NA +R+A SGWGA+V+++
Sbjct: 181 TLLNAVDRDAYSGWGAIVHVM 201
>gi|207345904|gb|EDZ72572.1| YER094Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 187
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 142/183 (77%), Gaps = 1/183 (0%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
+ NGG +VAMTGK+CVAIACD R G Q +++ F+KIF G H+++G+ GLATD T+
Sbjct: 6 SINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTTLN 64
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ R++ NLY+LKE R + P+ ++S+ LYERRFGPYFV P+V G++ ++ +P I
Sbjct: 65 EMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGF 124
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
DLIGC+++ DF+V G SDQL+GMCE+L+EPNLEP+DLFETI+QAL+NA +R+A+SGWG
Sbjct: 125 DLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWG 184
Query: 185 AVV 187
AVV
Sbjct: 185 AVV 187
>gi|212537587|ref|XP_002148949.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068691|gb|EEA22782.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 192
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 139/192 (72%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF Y+G+ GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVTTVSDLFRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R +SP+ L ++S+ LYERRFGPYFV P++ G++ T +P I D IGC++
Sbjct: 61 YRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+G CE LWEP+L PDDLFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGANVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|296425517|ref|XP_002842287.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638550|emb|CAZ86478.1| unnamed protein product [Tuber melanosporum]
Length = 593
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 148/202 (73%), Gaps = 1/202 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGG++VAM GK+CVAIACD R G+Q ++++F KIF G +Y+GL GLATD +V
Sbjct: 393 FSINGGAVVAMVGKDCVAIACDLRLGMQALTVSNDFPKIFNYG-DVYLGLTGLATDVTSV 451
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ R++ N+Y L+E R + P+ + ++S+ LYE+RFGPYFV P++ G++ + +P I
Sbjct: 452 SELFRYKVNMYRLREERDIEPQTMANLVSSSLYEKRFGPYFVSPVIAGINQHSGKPFICG 511
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D IGC+N DF+V G SDQL+G CE LWEP+LEP+DLFETI+QAL+N+ +R+A+SGW
Sbjct: 512 FDSIGCINFAEDFIVSGTASDQLFGTCEGLWEPDLEPEDLFETISQALLNSVDRDALSGW 571
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GA VY++ +DKV R +K R D
Sbjct: 572 GAHVYLVTKDKVVKRLLKGRQD 593
>gi|325092329|gb|EGC45639.1| proteasome component [Ajellomyces capsulatus H88]
Length = 192
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 141/192 (73%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q ++++F KIF Y+GL GLATD +V +R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNSFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R++SP+ L +IS+ LYE+RFGPYFV P++ G++ T +P I D IGC++
Sbjct: 61 YRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+G CE LWEP+L PDDLFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|325179973|emb|CCA14375.1| proteasome subunit beta type3 putative [Albugo laibachii Nc14]
Length = 204
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 151/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI++YNG +I+AM GK+CV IACD R G+Q ++ NFQK+F+V +++GL GLATD
Sbjct: 1 MSILSYNGSAIIAMAGKDCVGIACDTRLGLQAQTISTNFQKVFRVSDKIFLGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q ++F+ N+Y++ E R + P+ L + +S M+Y++RFGP+F+EP++ GL + +P
Sbjct: 61 QTVSQLLKFKVNMYKMNEERDLKPETLSSYLSAMMYKKRFGPWFIEPVIAGLTADN-QPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ +MD +GC + DFVV G + LYGMCE+++ P++E +DLFET++Q L++AC R+A+
Sbjct: 120 LSSMDCLGCEMKTKDFVVAGTMEEALYGMCESMYRPDMESEDLFETLSQCLLSACNRDAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV+II + R +K+R D
Sbjct: 180 SGWGAVVHIITPKGIMSRTLKSRQD 204
>gi|119501054|ref|XP_001267284.1| proteasome component Pup3, putative [Neosartorya fischeri NRRL 181]
gi|119415449|gb|EAW25387.1| proteasome component Pup3, putative [Neosartorya fischeri NRRL 181]
Length = 192
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 140/192 (72%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF G Y+GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTYLGLTGLATDVNTVSDLFRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ L ++S+ LYERRFGP+FV P++ G++ T +P I D IGC++
Sbjct: 61 YRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL++A +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDLSPEDLFETISQALLSAVDRDALSGWGAQVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|322705678|gb|EFY97262.1| proteasome component PUP3 [Metarhizium anisopliae ARSEF 23]
Length = 191
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVGTVADLFRYKVNM 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP+T +P I D IGC++
Sbjct: 60 YRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G S+QL+GMCE LWE ++ PD LFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 120 KDFIVSGTASEQLFGMCEGLWEEDMGPDALFETISQALLNAVDRDALSGWGAHVYIIEKD 179
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|123449540|ref|XP_001313488.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121895373|gb|EAY00559.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 206
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 141/203 (69%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I TYNG ++AM G +CVAIA D+R G+ ++ +F++IFQ+ +Y+GL GLATD T
Sbjct: 4 ISTYNGSCVLAMAGDHCVAIASDRRLGVNMLTVSKDFKRIFQINDRIYLGLAGLATDVLT 63
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
V +++RF NL EL+E R + PK + ++ + LYE+RF P+FV P++ GL PET EP +
Sbjct: 64 VREQLRFDVNLLELREERPIDPKKFMNLVKSTLYEKRFSPFFVTPVIAGLLPETNEPYLA 123
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
D IG P DF V G C + LYG+CE+ W PN+ PD+LFE A+ L+ A ER+++SG
Sbjct: 124 ASDSIGAFAFPKDFAVAGTCEESLYGICESAWRPNMNPDELFECTAKCLIAAVERDSISG 183
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
WG +VYII QDKV ++ +KTRMD
Sbjct: 184 WGGIVYIITQDKVIIKEIKTRMD 206
>gi|452980318|gb|EME80079.1| hypothetical protein MYCFIDRAFT_189753 [Pseudocercospora fijiensis
CIRAD86]
Length = 192
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 141/192 (73%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF ++GL GLATD TV + R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYSQSTFLGLTGLATDVSTVSELFRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R++SP+ ++S+ LYERRFGP+FV P+V G++ T +P I D IGC++
Sbjct: 61 YRLREEREISPQTFANLVSSSLYERRFGPWFVSPVVAGINQTTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+G CE LWEP+LEP+DLFET++QAL++A +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDLEPEDLFETMSQALLSAVDRDALSGWGAHVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|346320946|gb|EGX90546.1| proteasome component PUP3 [Cordyceps militaris CM01]
gi|400595217|gb|EJP63024.1| proteasome component PUP3 [Beauveria bassiana ARSEF 2860]
Length = 191
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ ++S+ LYERRFGPYF+ P+V GLDP+T +P I D IGC++
Sbjct: 60 YRLREERDIAPRTFANLVSSSLYERRFGPYFISPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+GMCE L+EP+LEPD LFETI+QAL+ A +R+A+SGWGA VYIIE+
Sbjct: 120 KDFIVAGTASDQLFGMCEGLYEPDLEPDALFETISQALLCAVDRDALSGWGAHVYIIEKG 179
Query: 194 KVTVRHVKTRMD 205
K+T R +K R D
Sbjct: 180 KITKRLLKGRQD 191
>gi|324524031|gb|ADY48349.1| Proteasome subunit beta type-3 [Ascaris suum]
Length = 205
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 142/205 (69%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+I+AM G CV IA D R G Q T +A N +K+ ++G +Y+GL G +D
Sbjct: 1 MSIMSYNGGTILAMAGNECVCIATDLRLGEQMTTIATNVKKVHKLGDRVYIGLGGFYSDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
+TV KI FR+NLYEL+ENRK+ P+V MISN+LY+ RFG Y EP+V GLDP T +
Sbjct: 61 KTVLDKILFRKNLYELRENRKIKPEVAATMISNLLYQHRFGGYLTEPLVAGLDPVTNKAY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IGC+ P DFV G ++ L G+CE W N+ D+LFE AQ++++A ER+A
Sbjct: 121 ICGMDTIGCIAAPKDFVAVGTGTEYLLGVCEGFWHENMNADELFEATAQSMLSAMERDAA 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG ++Y I ++KV ++ +K RMD
Sbjct: 181 SGWGVLIYTITKNKVNIKTIKARMD 205
>gi|322701542|gb|EFY93291.1| proteasome component PUP3 [Metarhizium acridum CQMa 102]
Length = 191
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVADLFRYKVNM 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP+T +P I D IGC++
Sbjct: 60 YRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G S+QL+GMCE LWE ++ PD LFETI+QAL+NA +R+A+SGWGA VYIIE++
Sbjct: 120 KDFIVSGTASEQLFGMCEGLWEEDMGPDALFETISQALLNAVDRDALSGWGAHVYIIEKN 179
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|154308476|ref|XP_001553574.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 198
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 141/198 (71%), Gaps = 6/198 (3%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF G +Y+GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVSTVSDLFRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R +SP + ++S+ LYERRFGP+FV P+V GLD +T +P I D IGC++
Sbjct: 61 YRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLDQKTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNL------EPDDLFETIAQALVNACERNAVSGWGAVV 187
DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+SGWGA V
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDLLNSQIQGPEDLFETISQALLNAVDRDALSGWGAHV 180
Query: 188 YIIEQDKVTVRHVKTRMD 205
YIIE+DKVT R +K R D
Sbjct: 181 YIIEKDKVTKRLLKGRQD 198
>gi|146323725|ref|XP_752084.2| proteasome component Pup3 [Aspergillus fumigatus Af293]
gi|129557567|gb|EAL90046.2| proteasome component Pup3, putative [Aspergillus fumigatus Af293]
gi|159125002|gb|EDP50119.1| proteasome component Pup3, putative [Aspergillus fumigatus A1163]
Length = 192
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 141/192 (73%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF G Y+GL GLATD TV +R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTYLGLTGLATDVNTVSDLLRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ L ++S+ LYERRFGP+FV P++ G++ T +P I D IGC++
Sbjct: 61 YRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G S+QL+G CE LWEP+L P+DLFETI+QAL++A +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTASEQLFGTCEGLWEPDLSPEDLFETISQALLSAVDRDALSGWGAQVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|268530996|ref|XP_002630624.1| C. briggsae CBR-PBS-3 protein [Caenorhabditis briggsae]
Length = 204
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+Y GG++VAM G CV IA D R G Q T +A + +K+ +V +YVGL G +D
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
+TV +KI FR+NLYEL+ENR++ P+VL MISN+ Y+ RFG YF EP+V GLD +T +P
Sbjct: 61 RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLD-DTNKPY 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IGCV+ P DFV G + L G+CE W N++PD+LFE AQ++++ ER+A
Sbjct: 120 ICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAA 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVVY I +DKV + +K RMD
Sbjct: 180 SGWGAVVYTITKDKVNISTIKARMD 204
>gi|17535357|ref|NP_494913.1| Protein PBS-3 [Caenorhabditis elegans]
gi|17380195|sp|Q23237.1|PSB3_CAEEL RecName: Full=Proteasome subunit beta type-3; Short=Proteasome
subunit beta 3
gi|351050990|emb|CCD73694.1| Protein PBS-3 [Caenorhabditis elegans]
Length = 204
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+Y GG++VAM G CV IA D R G Q T +A + +K+ +V +YVGL G +D
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
+TV +KI FR+NLYEL+ENR + P+VL MISN+ Y+ RFG YF EP+V GLD +T +P
Sbjct: 61 RTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLD-DTNKPY 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IGCV+ P DFV G + L G+CE W N++PD+LFE AQ++++ ER+A
Sbjct: 120 ICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAA 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVVY I +DKV V +K RMD
Sbjct: 180 SGWGAVVYTITKDKVNVSTIKARMD 204
>gi|134106685|ref|XP_777884.1| hypothetical protein CNBA3530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260584|gb|EAL23237.1| hypothetical protein CNBA3530 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 216
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 140/195 (71%), Gaps = 5/195 (2%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS+M NGGS+VAM GK+CVAIA D R G Q +A NF K+F + +Y GLPGLATD
Sbjct: 1 MSVMELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPINDKLYCGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA--- 117
T+ + +RFR N+Y +KE R+++PK ++S+ LYE+RFGP+F+EP+V GL T+
Sbjct: 61 YTLREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLPTPTSLEP 120
Query: 118 --EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNAC 175
P I MD IGC+ P DF V G +D+LYG+ E LWEP+LEP+DLFETI+Q L++A
Sbjct: 121 HPRPYISTMDTIGCITTPKDFAVAGTAADKLYGIAEGLWEPDLEPEDLFETISQTLLSAV 180
Query: 176 ERNAVSGWGAVVYII 190
+R+A+SGWGAVV II
Sbjct: 181 DRDALSGWGAVVNII 195
>gi|308493735|ref|XP_003109057.1| CRE-PBS-3 protein [Caenorhabditis remanei]
gi|308247614|gb|EFO91566.1| CRE-PBS-3 protein [Caenorhabditis remanei]
Length = 204
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+Y GG++VAM G CV IA D R G Q T +A + +K+ +V +YVGL G +D
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
+TV +KI FR+NLYEL+ENR++ P+VL MISN+ Y+ RFG YF EP+V GLD ++ +P
Sbjct: 61 RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLD-DSNKPY 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IGCV+ P DFV G + L G+CE W N++PD+LFE AQ++++ ER+A
Sbjct: 120 ICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAA 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVVY I +DKV V +K RMD
Sbjct: 180 SGWGAVVYTITKDKVNVSTIKARMD 204
>gi|341897730|gb|EGT53665.1| hypothetical protein CAEBREN_01834 [Caenorhabditis brenneri]
Length = 204
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+Y GG+IVAM G CV IA D R G Q T +A + +K+ +V +YVGL G +D
Sbjct: 1 MSIMSYTGGTIVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
+TV +KI FR+NLYEL+ENR++ P+VL MISN+ Y+ RFG YF EP+V GLD +T +P
Sbjct: 61 RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLD-DTNKPY 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IGCV+ P DFV G + L G+CE W N++P++LFE AQ++++ ER+A
Sbjct: 120 ICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPEELFEATAQSILSCLERDAA 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVVY I +DKV V +K RMD
Sbjct: 180 SGWGAVVYTITKDKVNVSTIKARMD 204
>gi|17380183|sp|O65084.1|PSB3_PICMA RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit beta-3
gi|2982322|gb|AAC32146.1| probable proteasome subunit [Picea mariana]
gi|116784298|gb|ABK23292.1| unknown [Picea sitchensis]
Length = 204
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 147/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ+IF++ +YVGL GLATD
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ+ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL E +P
Sbjct: 61 QTLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLG-EDDKPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G ++ LYG CE++++P++EP++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDSIGAKELAKDFVVAGTAAESLYGACESMYKPDMEPEELFETISQALLSSIDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ ++V R +K RMD
Sbjct: 180 SGWGGHVYVVSPNQVIERTLKGRMD 204
>gi|326509597|dbj|BAJ87014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 147/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F++ +Y+GL GLA+D
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYIGLSGLASDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ F+ LY+L+E R M P+ +++S+MLYE+RFGPYF +P++ GL + EP
Sbjct: 61 QTLYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDD-EPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++PN+EP++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V I+ +V R +K RMD
Sbjct: 180 SGWGGYVLIVTATEVQERVLKGRMD 204
>gi|258566702|ref|XP_002584095.1| proteasome component PUP3 [Uncinocarpus reesii 1704]
gi|237905541|gb|EEP79942.1| proteasome component PUP3 [Uncinocarpus reesii 1704]
Length = 192
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 142/192 (73%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF Y+GL GLATD +V +R++ NL
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVSSVSDLMRYKVNL 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R++SP+ L ++S+ LYE+RFGP+FV P++ G++ T +P I D IGC++
Sbjct: 61 YRLREERQISPQTLANLVSSSLYEKRFGPWFVSPVLAGINHTTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+GMCE LWEP+L P++LFET++QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTASDQLFGMCEGLWEPDLGPEELFETVSQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
+VT R +K R D
Sbjct: 181 RVTKRLLKGRQD 192
>gi|255083731|ref|XP_002508440.1| predicted protein [Micromonas sp. RCC299]
gi|226523717|gb|ACO69698.1| predicted protein [Micromonas sp. RCC299]
Length = 207
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 148/207 (71%), Gaps = 2/207 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATD 59
MSIM+YNG +I+AM GK CVAIA D RFGI Q A + +KI+++ H+YVGL GLATD
Sbjct: 1 MSIMSYNGAAIIAMCGKECVAIASDLRFGINQQQTTAVDMKKIYKIHDHLYVGLSGLATD 60
Query: 60 TQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA-E 118
T+ Q+ +FR N+YEL+E+RKM P+ ++S MLYE+RFGPY+ EP+V GLD +
Sbjct: 61 QATLAQRFKFRHNMYELRESRKMRPETFANLVSTMLYEKRFGPYYAEPIVAGLDATNGYK 120
Query: 119 PIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERN 178
P I MDLIG + +FVV G + L+G+CE++++P+LEP++LFE IAQ ++ R+
Sbjct: 121 PFITGMDLIGAMAPTDNFVVCGNNEESLFGVCESMYKPDLEPEELFEVIAQCILAGVNRD 180
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+SGWG VV++I +DKV R +K RMD
Sbjct: 181 CLSGWGGVVHVISKDKVITRTLKGRMD 207
>gi|330925823|ref|XP_003301210.1| hypothetical protein PTT_12656 [Pyrenophora teres f. teres 0-1]
gi|311324271|gb|EFQ90697.1| hypothetical protein PTT_12656 [Pyrenophora teres f. teres 0-1]
Length = 191
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFQYG-DVFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R +SP+ + ++S+ LYE+RFGPYF+ P++ G++ + +P I D IGC++
Sbjct: 60 YRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFICGFDSIGCIDFA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+SGWGA VYIIE+D
Sbjct: 120 KDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEKD 179
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|168037918|ref|XP_001771449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677176|gb|EDQ63649.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 147/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI +YNG +++AM GK+C AIA D+R G+ +A +FQ+IF++ H+Y+GL GLATD
Sbjct: 1 MSITSYNGSALIAMVGKDCFAIASDRRLGVNFQTIACDFQRIFKIHDHLYIGLSGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT++Q++ FR LY+L+E R M P+ +++S MLYE+RFGPYF EP++ GL+ + P
Sbjct: 61 QTMHQRLNFRHKLYQLREERNMRPETFASLVSAMLYEKRFGPYFCEPIIAGLNDD-GTPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I DLIG DFVV G S+ LYG CE++++P+L PD+LFE I+QAL+ + +R+ +
Sbjct: 120 ICTTDLIGAKQLAKDFVVSGTASESLYGACESMYKPDLGPDELFEVISQALLASVDRDCI 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG +V+++ ++V + +K RMD
Sbjct: 180 SGWGGIVHVVTPNQVITKTLKGRMD 204
>gi|357123202|ref|XP_003563301.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
distachyon]
Length = 204
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F++ +Y+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYLGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ F+ LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL E EP
Sbjct: 61 QTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLG-EDNEPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++PN+EP++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V ++ +V R +K RMD
Sbjct: 180 SGWGGYVLVVTPTEVQERVLKGRMD 204
>gi|330801313|ref|XP_003288673.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
gi|325081295|gb|EGC34816.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
Length = 205
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 147/205 (71%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGG+ + MTGKNCVAIA D RFGIQ +++++ K+++V ++G+ GL TD
Sbjct: 1 MSIMAYNGGACIVMTGKNCVAIASDLRFGIQQQTISNDYPKVYRVNDKCFIGISGLVTDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT++QKI FR NLY+L+E R MSPKV+ +I+NMLYE+RFGPYF EP++ GL+ P
Sbjct: 61 QTLHQKIVFRHNLYKLREERDMSPKVVTNLIANMLYEKRFGPYFTEPLICGLEGPDNTPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MDLIG Q DF+V G + +YG+CETL++ ++ D+LFETI+Q ++ + ER+A+
Sbjct: 121 ISGMDLIGAQVQTDDFLVVGTMTPAMYGVCETLYKKDMNEDELFETISQCMLASLERDAL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGAVV II K+ + + R D
Sbjct: 181 SGWGAVVNIITPTKLITKKLIGRQD 205
>gi|119590978|gb|EAW70572.1| hCG1644450 [Homo sapiens]
Length = 205
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 150/205 (73%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+I+AM GKN VAIA D+ FGIQ + +FQ+IF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q V Q ++F+ NLYELKE +++ P +M++N LYE+ FGPY+ +P++ GLD +T +P
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
++DLIG DFVV G ++Q+YGMCE+LWEPN++P+ FETI+ A++NA + A
Sbjct: 121 SCSLDLIGFPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHPFETISPAMLNAVDWGAG 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +++I ++DK+T R +K +MD
Sbjct: 181 SGMGVIIHITKKDKITTRTLKAQMD 205
>gi|388491852|gb|AFK33992.1| unknown [Lotus japonicus]
Length = 204
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG +IVAM GKNC AIA D+R G+Q +A +FQ+IF+V +++ L GLATD
Sbjct: 1 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL E +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDED-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE +++P++EP++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDCIGAKELAKDFVVAGSASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 180 SGWGGHVYVVTPTEVKERILKGRMD 204
>gi|71003984|ref|XP_756658.1| hypothetical protein UM00511.1 [Ustilago maydis 521]
gi|46095730|gb|EAK80963.1| hypothetical protein UM00511.1 [Ustilago maydis 521]
Length = 189
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS+VA GKNCV IA D R G Q +A NF K+F+V YVGLPGLA+D
Sbjct: 1 MSIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYVGLPGLASDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ ++ R+R N+Y++KE R + P++ ++S+ LYERRFGPYF+EP++ G++ + EP
Sbjct: 61 ATLKERFRYRVNMYKMKEERDIEPEIFANLVSSTLYERRFGPYFIEPVIAGINSKD-EPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I D++GC+N DFVV G SD+L+GM E LWEP+L P++LFET++Q L+ A ER+A+
Sbjct: 120 IAASDVVGCLNFAKDFVVSGTASDKLFGMAEGLWEPDLGPEELFETVSQILLGALERDAL 179
Query: 181 SGWGAVVYII 190
SGWGAVV I+
Sbjct: 180 SGWGAVVRIM 189
>gi|242096488|ref|XP_002438734.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
gi|241916957|gb|EER90101.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
Length = 204
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F++ +Y+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL + P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDV-PF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++PN+EPD+LFETI+QAL ++ +R+ +
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPDELFETISQALNSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V I+ +V +K+RMD
Sbjct: 180 SGWGGYVLIVTPTEVREHVIKSRMD 204
>gi|168036644|ref|XP_001770816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677875|gb|EDQ64340.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 147/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI +YNG +++AM GKNC AIA D+R G+ +A +FQ+IF++ +Y+GL GLATD
Sbjct: 1 MSITSYNGSALIAMVGKNCFAIASDRRLGVNFQTIACDFQRIFKIHDKLYIGLSGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT++Q+++FR LY+L+E R M P+ +++S +LYE+RFGPYF EP++ GL+ + P
Sbjct: 61 QTMHQRLQFRHKLYQLREERNMRPETFASLVSAILYEKRFGPYFCEPIIAGLNDD-GTPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I DLIG DFVV G S+ LYG CE++++P+L PD+LFE I+QAL+ + +R+ +
Sbjct: 120 ICTTDLIGAKQLAKDFVVSGTASESLYGACESMYKPDLGPDELFEVISQALLASVDRDCI 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG +V+++ D+V + +K RMD
Sbjct: 180 SGWGGIVHVVTPDQVITKTLKGRMD 204
>gi|242064246|ref|XP_002453412.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
gi|241933243|gb|EES06388.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
Length = 204
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F++ +Y+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL + EP
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLG-DNNEPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++PN+EP++LFETI+QAL + +R+ +
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQASVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V I+ +V R +K RMD
Sbjct: 180 SGWGGYVLIVTPTEVQERVLKGRMD 204
>gi|313228966|emb|CBY18118.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 143/200 (71%), Gaps = 1/200 (0%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
YNGGSIV M+G NCV IA D R+G Q ++ +F KIF++ +++GL GLATD QTV
Sbjct: 5 YNGGSIVGMSGDNCVCIASDNRYGQQLHTISTDFPKIFKITDKIFIGLSGLATDIQTVLN 64
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
KI+++ N+YEL+ENRKMSPK M+SN+LYERRFGP+F EP++V L+ + + G MD
Sbjct: 65 KIKYKVNMYELRENRKMSPKCFKTMVSNLLYERRFGPFFAEPVIVALNDDGTTMLCG-MD 123
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G P D+VV G +++++G+ E W P++ ++LFE ++Q +++ C+RNA SGWGA
Sbjct: 124 CLGAAESPKDYVVAGTAANEMHGLAEAYWRPDMPAEELFECVSQTMLSGCDRNAASGWGA 183
Query: 186 VVYIIEQDKVTVRHVKTRMD 205
V I+++DK+ R +K RMD
Sbjct: 184 TVTIVQKDKIITRKLKARMD 203
>gi|56752759|gb|AAW24591.1| SJCHGC02212 protein [Schistosoma japonicum]
Length = 179
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 144/205 (70%), Gaps = 26/205 (12%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ +NG +++ M+ ++ +G +YVG PGLATD
Sbjct: 1 MSILAHNGSAVIGMS--------------------------VYSLGPRLYVGFPGLATDN 34
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV+Q+++FR+N+YEL+ENR + P+ + M+SN+LYERRFGPYFVEP+V G+D T++P
Sbjct: 35 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 94
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIGCV + +DFVV G C++Q+YGMCETLWE N++ +LFE I+Q ++NA R+A+
Sbjct: 95 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAI 154
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA VY+IE+D VT+ +K RMD
Sbjct: 155 SGWGARVYLIEKDAVTISDLKMRMD 179
>gi|67528502|ref|XP_662053.1| hypothetical protein AN4449.2 [Aspergillus nidulans FGSC A4]
gi|40741024|gb|EAA60214.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259482734|tpe|CBF77496.1| TPA: proteasome component Pup3, putative (AFU_orthologue;
AFUA_4G07420) [Aspergillus nidulans FGSC A4]
Length = 192
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 137/192 (71%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF Y+GL GLATD TV R + N+
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPGTYLGLTGLATDVSTVSDLFRLKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ L ++S+ LYERRFG YFV P++ G++ T +P I D IGC++
Sbjct: 61 YRLREERHIAPQTLANLVSSTLYERRFGAYFVSPVIAGINNTTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G SDQL+G CE LWEP++ P+DLFETI+QAL++A +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDMSPEDLFETISQALLSAVDRDALSGWGAQVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTQRLLKGRQD 192
>gi|225712652|gb|ACO12172.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
Length = 205
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 141/205 (68%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS+ T NG +++AM G +CV+IA D RFGI + +F K ++G ++VGL GLATD
Sbjct: 1 MSVFTINGSAVLAMKGNDCVSIASDLRFGINRHTVMTDFPKTLEMGPGLFVGLAGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV QK+ FR ++EL+E RKM P M+S++LYERRFGP+FV +V G D +P
Sbjct: 61 QTVQQKLNFRMKMFELREGRKMRPNTFSTMLSHLLYERRFGPFFVNSIVAGYDYVENKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I +MDLIG + P DFV G D L GMCE LW N+ P++L E +QA++N+ +R+++
Sbjct: 121 ISSMDLIGAITIPEDFVAAGTSEDSLMGMCEALWFENMNPEELSEATSQAIMNSFDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+GWGA V+IIE+ +VT R +KTRMD
Sbjct: 181 AGWGAEVHIIEKHQVTTRRIKTRMD 205
>gi|413954658|gb|AFW87307.1| proteasome subunit beta type [Zea mays]
Length = 204
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F+V +Y+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKVHDKLYIGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL + P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNV-PF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD +G DFVV G S+ LYG CE++++PN+EPD+LFET++QAL ++ +R+ +
Sbjct: 120 ICTMDCLGAKELAKDFVVSGTASESLYGACESMYKPNMEPDELFETVSQALNSSIDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V I+ +V +K+RMD
Sbjct: 180 SGWGGYVLIVTPTEVREHVIKSRMD 204
>gi|413935900|gb|AFW70451.1| proteasome subunit beta type [Zea mays]
Length = 305
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +F+++F+V +Y+GL GLATD
Sbjct: 102 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFRRVFKVHDKLYIGLSGLATDA 161
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L E R M P+ +++S +LYE+RFGPYF +P++ GL + EP
Sbjct: 162 QTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLG-DNDEPF 220
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++PN+EP++LFETI+QAL + +R+ +
Sbjct: 221 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQASVDRDCL 280
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V ++ +V R +K RMD
Sbjct: 281 SGWGGYVLVVTHTEVQERVLKGRMD 305
>gi|225459609|ref|XP_002285871.1| PREDICTED: proteasome subunit beta type-3-A isoform 1 [Vitis
vinifera]
gi|302141789|emb|CBI18992.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG +++AM GKNC AIA D+RFG+Q +A +FQKI+++ +++GL GLATD
Sbjct: 1 MSIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL E +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDED-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE +++P++EP++LFE I+QAL+++ +R+ +
Sbjct: 120 ICTMDSIGAKELAKDFVVAGTASESLYGACEAMFKPDMEPEELFEIISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 180 SGWGGHVYVVTPTEVKERILKGRMD 204
>gi|226505280|ref|NP_001141963.1| uncharacterized protein LOC100274112 [Zea mays]
gi|194706600|gb|ACF87384.1| unknown [Zea mays]
Length = 204
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F+V +Y+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKVHDKLYIGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL + P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNV-PF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD +G DFVV G S+ LYG CE+++ PN+EPD+LFET++QAL ++ +R+ +
Sbjct: 120 ICTMDCLGAKELAKDFVVSGTASESLYGACESMYRPNMEPDELFETVSQALNSSIDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V I+ +V +K+RMD
Sbjct: 180 SGWGGYVLIVTPTEVREHVIKSRMD 204
>gi|226504734|ref|NP_001140276.1| uncharacterized protein LOC100272320 [Zea mays]
gi|194698808|gb|ACF83488.1| unknown [Zea mays]
Length = 204
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +F+++F+V +Y+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFRRVFKVHDKLYIGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L E R M P+ +++S +LYE+RFGPYF +P++ GL + EP
Sbjct: 61 QTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLG-DNDEPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++PN+EP++LFETI+QAL + +R+ +
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQASVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V ++ +V R +K RMD
Sbjct: 180 SGWGGYVLVVTHTEVQERVLKGRMD 204
>gi|326488821|dbj|BAJ98022.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512002|dbj|BAJ95982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F++ +Y+GL GLA+D
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYIGLSGLASDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ F+ LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL E +P
Sbjct: 61 QTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLG-ENDQPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++P++EP++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPDMEPEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V I+ +V R +K RMD
Sbjct: 180 SGWGGYVLIVTPTEVQERVLKGRMD 204
>gi|115469154|ref|NP_001058176.1| Os06g0643100 [Oryza sativa Japonica Group]
gi|17380214|sp|Q9LST7.1|PSB3_ORYSJ RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit beta-3
gi|8671506|dbj|BAA96836.1| beta 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|51535468|dbj|BAD37365.1| 20S proteasome subunit beta type 3 [Oryza sativa Japonica Group]
gi|113596216|dbj|BAF20090.1| Os06g0643100 [Oryza sativa Japonica Group]
gi|218198634|gb|EEC81061.1| hypothetical protein OsI_23870 [Oryza sativa Indica Group]
gi|222635966|gb|EEE66098.1| hypothetical protein OsJ_22127 [Oryza sativa Japonica Group]
Length = 204
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F++ +Y+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL E EP
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLG-EDNEPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++PN+EP++LFETI+QAL ++ +R+ +
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V ++ +V +K RMD
Sbjct: 180 SGWGGFVLLVTPTEVKECVIKGRMD 204
>gi|307109788|gb|EFN58025.1| hypothetical protein CHLNCDRAFT_48590 [Chlorella variabilis]
Length = 204
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG +IVAM GK CVAI D RFG+Q LA +++K++++ +++GL GL TD
Sbjct: 1 MSIFEYNGSAIVAMAGKECVAIGSDLRFGVQLQTLATDYKKVYKIHDQLFIGLAGLGTDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
+T+ Q+ F+ NLY+L+E R + P ++S LYERRFGPYF +P++ GL+P+ P
Sbjct: 61 ETLSQRFAFKHNLYKLREERDIKPSAFGQLVSATLYERRFGPYFCQPVIAGLEPD-GSPY 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MD IG DF+V G +D L G+CE+LW P+L P++LFET++QAL++ +R+ +
Sbjct: 120 LCGMDSIGAQETAKDFMVAGTATDSLLGICESLWRPDLGPEELFETLSQALLSGQDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+GWGAVVY+I +DKV R +K RMD
Sbjct: 180 AGWGAVVYVITKDKVIARTLKGRMD 204
>gi|449464176|ref|XP_004149805.1| PREDICTED: proteasome subunit beta type-3-A-like [Cucumis sativus]
Length = 204
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQKI+++ +++GL GL TD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL E +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLSDED-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE +++P++EP++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 180 SGWGGHVYVVTPTEVKERILKGRMD 204
>gi|169602118|ref|XP_001794481.1| hypothetical protein SNOG_03937 [Phaeosphaeria nodorum SN15]
gi|160706087|gb|EAT89142.2| hypothetical protein SNOG_03937 [Phaeosphaeria nodorum SN15]
Length = 195
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 142/196 (72%), Gaps = 5/196 (2%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD TV R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGMQALTISNNFPKIFQYG-DVFLGLTGLATDVATVSDLFRYKVNM 59
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R +SP+ + ++S+ LYE+RFGPYFV P++ G++ T +P I D IGC++
Sbjct: 60 YRLREERNISPQTMANLVSSSLYEKRFGPYFVSPVIAGINQTTGKPFICGFDSIGCIDFA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNL----EPDDLFETIAQALVNACERNAVSGWGAVVYI 189
DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+SGWGA VYI
Sbjct: 120 KDFIVSGTASDQLFGTCEGLWEPDLVSSQGPEDLFETISQALLNAVDRDALSGWGAHVYI 179
Query: 190 IEQDKVTVRHVKTRMD 205
IE+DKVT R +K R D
Sbjct: 180 IEKDKVTKRLLKGRQD 195
>gi|82802840|gb|ABB92464.1| rcPSMB3 [Homo sapiens]
Length = 204
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 149/204 (73%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+I+AM GKN VAIA D+ FGIQ + +FQ+IF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q V Q ++F+ NLYELKE +++ P +M++N LYE+ FGPY+ +P++ GLD +T +P
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
++DLIG DFVV G ++Q+YGMCE+LWEPN++P+ FETI+ A++NA + A
Sbjct: 121 SCSLDLIGFPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHPFETISPAMLNAVDWGAG 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRM 204
SG G +++I ++DK+T R +K +M
Sbjct: 181 SGMGVIIHITKKDKITTRTLKAQM 204
>gi|66825821|ref|XP_646265.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
gi|74858609|sp|Q55D66.1|PSB3_DICDI RecName: Full=Proteasome subunit beta type-3
gi|60474299|gb|EAL72236.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
Length = 205
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 146/205 (71%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGG+ + M GKNCVAIA D RFGIQ ++++F K++++ +VG+ GL TD
Sbjct: 1 MSIMAYNGGACIVMVGKNCVAIASDLRFGIQQQTISNDFPKVYRINDKCFVGISGLVTDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQK+ FR NLY+L+E R MSP+V+ +++NMLYE+RFGPYF EP++ GL+ P
Sbjct: 61 QTLYQKLVFRHNLYKLREERDMSPRVVSNLLTNMLYEKRFGPYFTEPLICGLEGPDNTPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MDLIG DF+V G + +YG+CETL++ ++ DDLFETI+Q ++ + +R+A+
Sbjct: 121 ISGMDLIGASVATDDFLVVGTMTPAMYGVCETLYKKDMNEDDLFETISQCMLASLDRDAL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWGA+V++I +V + + R D
Sbjct: 181 SGWGAIVHVITPTQVITKKLLGRQD 205
>gi|49388033|dbj|BAD25149.1| Proteasome subunit beta type 3 [Oryza sativa Japonica Group]
gi|215768995|dbj|BAH01224.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 204
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F++ +Y+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL + EP
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLG-DNDEPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++P++EP++LFETI+QAL + +R+ +
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPSMEPEELFETISQALQASVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V ++ +V R +K RMD
Sbjct: 180 SGWGGYVLLVTPTEVQERVIKGRMD 204
>gi|357138383|ref|XP_003570772.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
distachyon]
Length = 204
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F+V +Y+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKVHEKLYIGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ F+ LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL + +P
Sbjct: 61 QTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLG-DNDQPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++P++EP++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPDMEPEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V ++ +V R +K RMD
Sbjct: 180 SGWGGYVLVVTPTEVQERVLKGRMD 204
>gi|50556674|ref|XP_505745.1| YALI0F22341p [Yarrowia lipolytica]
gi|49651615|emb|CAG78556.1| YALI0F22341p [Yarrowia lipolytica CLIB122]
Length = 206
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 149/199 (74%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VAM GK+CVAIACD R G QG ++++F+K+F G ++Y+GL GLATD QT+++
Sbjct: 8 NGGSCVAMVGKDCVAIACDLRMGSQGLGVSNDFEKVFNYGDNVYLGLTGLATDVQTLHEV 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R + NLY++ E R++ P+ ++S+ LYE+RFGPYFV P+V G++ +T +P I DL
Sbjct: 68 FREKTNLYKMAEERQIEPETFANLVSSTLYEKRFGPYFVGPIVAGINSKTEKPFICGFDL 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IGC++ DF+V G SD LYGMCE+LW+P+LEP+DLF T +QAL+ A +R+ + GWGA+
Sbjct: 128 IGCIDFAKDFIVSGTASDMLYGMCESLWQPDLEPEDLFNTCSQALMCAMDRDPLGGWGAI 187
Query: 187 VYIIEQDKVTVRHVKTRMD 205
V+II +DKV + +KTR D
Sbjct: 188 VWIITKDKVVKKLLKTRQD 206
>gi|388521659|gb|AFK48891.1| unknown [Lotus japonicus]
Length = 204
Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC A+A D+R G+Q +A +FQ+I ++ +++GL GLATD
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAVASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S++LYE+RFGPYF +P++ GL E +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSSILYEKRFGPYFCQPVIAGLGDED-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE +++P++EP++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDCIGAKELAKDFVVAGSASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 180 SGWGGHVYVVTPTEVKERILKGRMD 204
>gi|115398103|ref|XP_001214643.1| proteasome component PUP3 [Aspergillus terreus NIH2624]
gi|114192834|gb|EAU34534.1| proteasome component PUP3 [Aspergillus terreus NIH2624]
Length = 192
Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 141/192 (73%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q +++NF KIF G ++GL GLATD TV +R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTGLATDVSTVSDLLRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R ++P+ L ++S+ LYERRFGP+FV P+V G++ T +P I D IGC++
Sbjct: 61 YRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINYTTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DF+V G S+QL+G CE+L+E +L P+DLFETI+QA+++A +R+A+SGWGA VYIIE+D
Sbjct: 121 KDFIVSGTASEQLFGTCESLYEQDLSPEDLFETISQAMLSAVDRDALSGWGAQVYIIEKD 180
Query: 194 KVTVRHVKTRMD 205
KVT R +K R D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|351723417|ref|NP_001237278.1| uncharacterized protein LOC100306084 [Glycine max]
gi|255627485|gb|ACU14087.1| unknown [Glycine max]
Length = 204
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ+I ++ +++GL GLATD
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL + +P
Sbjct: 61 QTLYQRLLFRHKLYQLREERDMKPQTFASLVSAILYEKRFGPYFCQPVIAGLGDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++P++EP++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEPEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 180 SGWGGHVYVVTPTEVKERILKGRMD 204
>gi|149235806|ref|XP_001523781.1| proteasome component PUP3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452760|gb|EDK47016.1| proteasome component PUP3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 212
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 143/208 (68%), Gaps = 6/208 (2%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGG+ VAM GK+C+AIA D R G Q + ++F+K FQ H ++ L GLATD TV
Sbjct: 5 FSINGGAAVAMIGKDCIAIASDLRLGSQSLGVLNHFEKTFQFLPHTFMALTGLATDVTTV 64
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA------ 117
+ +F+ NLY+L+E + P L ++S++LYERRFGP+FV P+V GL+
Sbjct: 65 LELFKFKTNLYKLREEHYIEPLTLANLVSSLLYERRFGPWFVSPIVAGLEKVKGSKNGEV 124
Query: 118 EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACER 177
+P I D IGC++ DF+V G +DQLYGMCE L+EPNLEP++LFETI+Q L+NA +R
Sbjct: 125 KPFICGFDSIGCIDYSHDFIVSGTATDQLYGMCEGLYEPNLEPEELFETISQCLLNAVDR 184
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A+SGWG VV+II +DKV R +KTR D
Sbjct: 185 DALSGWGCVVHIITKDKVIKRTLKTRQD 212
>gi|413943569|gb|AFW76218.1| hypothetical protein ZEAMMB73_756098 [Zea mays]
Length = 204
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F++ +Y+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL + P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNV-PF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD +G DFVV G S+ LYG CE++++P+++PD+LFETI+QAL ++ +R+ +
Sbjct: 120 ICTMDCLGAKELAKDFVVSGTASESLYGACESMYKPDMQPDELFETISQALNSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V I+ +V +K+RMD
Sbjct: 180 SGWGGYVLIVTPTEVREHVIKSRMD 204
>gi|298711226|emb|CBJ32446.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 204
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNG +I+AMTGKNCV I D R G Q +A +F+KIF++G + VGLPGLATD
Sbjct: 1 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDKLMVGLPGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + + FR NLY L+E R++ P+ A++S++LY++RFGPYFVEP+V GL E P
Sbjct: 61 ITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGL-KEDNTPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I DLIG DFVVGG C++ LYGMCE+ + P+++ D+LFET+AQ L+ + +R+A+
Sbjct: 120 ISAFDLIGAPVVTDDFVVGGTCTNNLYGMCESFYRPDMDKDELFETMAQCLLTSVDRDAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VV+II + + + +K R D
Sbjct: 180 SGWGGVVHIITPEGIMSKTLKGRQD 204
>gi|125538349|gb|EAY84744.1| hypothetical protein OsI_06114 [Oryza sativa Indica Group]
gi|125581051|gb|EAZ21982.1| hypothetical protein OsJ_05637 [Oryza sativa Japonica Group]
Length = 213
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
+ I YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F++ +Y+GL GLATD
Sbjct: 10 LQIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 69
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL + EP
Sbjct: 70 QTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLG-DNDEPF 128
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++P++EP++LFETI+QAL + +R+ +
Sbjct: 129 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPSMEPEELFETISQALQASVDRDCL 188
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V ++ +V R +K RMD
Sbjct: 189 SGWGGYVLLVTPTEVQERVIKGRMD 213
>gi|346978239|gb|EGY21691.1| proteasome component PUP3 [Verticillium dahliae VdLs.17]
Length = 222
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 142/202 (70%), Gaps = 12/202 (5%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ +GG+ VAM GK+CVAIACD R G+Q +++NF KIFQ G +++GL GLATD TV
Sbjct: 33 LILDGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTV 91
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
R++ N+Y L+E R ++P+ ++S+ LYERRFGPYFV P+V GLDP+T +P I
Sbjct: 92 GDLFRYKSNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICG 151
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D IGC++ DF+V G S+QL+GMCE+LWEP+L +L+NA +R+A+SGW
Sbjct: 152 FDSIGCIDFAKDFIVSGTASEQLFGMCESLWEPDL-----------SLLNAVDRDALSGW 200
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GA VYIIE+DKVT R +K R D
Sbjct: 201 GAHVYIIEKDKVTKRLLKGRQD 222
>gi|351721818|ref|NP_001237990.1| uncharacterized protein LOC100499664 [Glycine max]
gi|255625639|gb|ACU13164.1| unknown [Glycine max]
Length = 204
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ+I ++ +++ L GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL E +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDED-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD +G DFVV G S+ LYG CE +++P++EP++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDCLGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 180 SGWGGHVYVVTPTEVKERILKGRMD 204
>gi|224063046|ref|XP_002300970.1| predicted protein [Populus trichocarpa]
gi|118487526|gb|ABK95590.1| unknown [Populus trichocarpa]
gi|222842696|gb|EEE80243.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 141/205 (68%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG +IVAM GKNC AIA D+R G+ +A +FQ+I+++ ++VGL GL TD
Sbjct: 1 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVNLQTVATDFQRIYKIHDKLFVGLSGLGTDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR +Y+L+E R M P+ ++S +LYE+RFGPYF +P++ GLD + +P
Sbjct: 61 QTLYQRLVFRHKMYQLREERDMKPETFANLVSAVLYEKRFGPYFCQPVIAGLDDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE ++P++EPD+LFE ++QAL+ + +R+ +
Sbjct: 120 ICTMDFIGAKELAKDFVVAGSASESLYGACEAFFKPDMEPDELFEVVSQALLASVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG +YI+ D + + +K RMD
Sbjct: 180 SGWGGHIYIVTPDDIKEKILKGRMD 204
>gi|255558626|ref|XP_002520338.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223540557|gb|EEF42124.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 204
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG +++AM GKNC AIA D+R G+Q +A +FQ+I+++ +++GL GLATD
Sbjct: 1 MSIFEYNGSALIAMVGKNCFAIASDRRLGVQLQTIATDFQRIYKIHDRLFLGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M+P+ +++S +LYE+RFGPYF +P++ GL E +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMNPETFASLVSALLYEKRFGPYFCQPVIAGLSDEN-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++P+LE ++L E I+QAL+++ +R+ +
Sbjct: 120 ICTMDSIGAKELARDFVVAGTASESLYGACESMFKPDLEAEELTEIISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +VT R +K RMD
Sbjct: 180 SGWGGHVYVVTPTEVTERILKGRMD 204
>gi|388491594|gb|AFK33863.1| unknown [Medicago truncatula]
Length = 206
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ+I ++ +++GL GLATD+
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S+M YE+RFGPYF +P++ GL + +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++P++E ++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 180 SGWGGHVYVVTPTEVKERILKGRMD 204
>gi|357509159|ref|XP_003624868.1| Proteasome subunit beta type [Medicago truncatula]
gi|355499883|gb|AES81086.1| Proteasome subunit beta type [Medicago truncatula]
Length = 204
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ+I ++ +++GL GLATD+
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S+M YE+RFGPYF +P++ GL + +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++P++E ++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 180 SGWGGHVYVVTPTEVKERILKGRMD 204
>gi|428162279|gb|EKX31444.1| proteasome subunit beta type 3 [Guillardia theta CCMP2712]
Length = 208
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 146/209 (69%), Gaps = 5/209 (2%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNGG ++ M GKNCVAIACDKR+G Q LA + K++++ +++GL GLATD
Sbjct: 1 MSITEYNGGCVIGMAGKNCVAIACDKRYGAQYQTLATDKTKVYKMHDQLFIGLAGLATDQ 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT Y++++FR +Y L+E R + P M+S +LYE+RFGPYF+EP++ GLD E +P
Sbjct: 61 QTFYERLKFRLAMYSLREERLIKPASFGKMVSTLLYEKRFGPYFIEPVIAGLDKEN-KPY 119
Query: 121 IGNMDLIGCVNQP----SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACE 176
+ + D IG P + FVV G C++QL GMCE++W +LEP++LFET++Q L+ +
Sbjct: 120 LFSSDFIGAPLLPDMDTNGFVVAGTCTEQLMGMCESMWRKDLEPEELFETVSQCLLAGQD 179
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +SGWGAVV+II D+V R ++ RMD
Sbjct: 180 RDCLSGWGAVVHIICPDRVITRTLRGRMD 208
>gi|388513745|gb|AFK44934.1| unknown [Medicago truncatula]
Length = 204
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ+I ++ +++GL GLATD+
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S+M YE+RFGPYF +P++ GL + +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMRPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++P++E ++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 180 SGWGGHVYVVTPTEVKERILKGRMD 204
>gi|297839603|ref|XP_002887683.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
lyrata]
gi|297333524|gb|EFH63942.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
lyrata]
Length = 204
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ+I ++ H+++GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGP+ +P++ GL + +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDN-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE +++P++E ++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ ++V R +K RMD
Sbjct: 180 SGWGGHVYVVTPNEVKERILKGRMD 204
>gi|224084924|ref|XP_002307450.1| predicted protein [Populus trichocarpa]
gi|222856899|gb|EEE94446.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG +IVAM GKNC AIA D+R G+ +A +FQ+I+++ ++VGL GL TD
Sbjct: 1 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVNLQTVATDFQRIYKIHDKVFVGLSGLGTDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL + +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLGDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE L++P++EP++LFE ++QAL+ + +R+ +
Sbjct: 120 ICTMDFIGAKELAKDFVVAGSASESLYGACEALFKPDMEPEELFEVVSQALLASVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG +YI+ D++ + +K RMD
Sbjct: 180 SGWGGHIYIVTPDEIREKILKGRMD 204
>gi|18411547|ref|NP_565156.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|79321410|ref|NP_001031294.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|17380184|sp|O81153.1|PSB3B_ARATH RecName: Full=Proteasome subunit beta type-3-B; AltName: Full=20S
proteasome beta subunit C-2
gi|14326552|gb|AAK60320.1|AF385730_1 At1g77440/T5M16_3 [Arabidopsis thaliana]
gi|3421109|gb|AAC32069.1| 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
gi|19548049|gb|AAL87388.1| At1g77440/T5M16_3 [Arabidopsis thaliana]
gi|332197856|gb|AEE35977.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|332197857|gb|AEE35978.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
Length = 204
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ+I ++ H+++GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGP+ +P++ GL + +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDN-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE +++P++E ++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 180 SGWGGHVYVVTPKEVKERILKGRMD 204
>gi|346469773|gb|AEO34731.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+ +A +F++IF++ +YVGL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVNLQTIATDFKRIFRIHDKLYVGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL E P
Sbjct: 61 LTLYQRLVFRHKLYQLREERDMKPETFASVVSAILYEKRFGPYFCQPVIAGLG-EDDVPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G ++ LYG CE++++PN+EP++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTANEPLYGACESMYKPNMEPEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG V+++ +V R +K RMD
Sbjct: 180 SGWGGHVFLVTPTEVQERTLKGRMD 204
>gi|303287020|ref|XP_003062799.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455435|gb|EEH52738.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 206
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 142/206 (68%), Gaps = 1/206 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATD 59
+SIM+YNG +I+AM GKNCVAIA D RFGI Q A + +KI+++ H+YVGL G +
Sbjct: 1 VSIMSYNGAAIIAMCGKNCVAIASDLRFGINQQQTTAVDMKKIYEIHPHLYVGLSGASES 60
Query: 60 TQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
+ Y + FR NLY+L+E R M P+ ++S MLYE+RFGPY+ EP+V GLDP T EP
Sbjct: 61 HWSPYDRFAFRHNLYKLREGRDMRPETFANVVSAMLYEKRFGPYYAEPVVAGLDPVTFEP 120
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
I MDLIG +FVV G + L+G+CE++++P+LEP++LFE IAQ L+ R+
Sbjct: 121 FITGMDLIGAAAPTDNFVVCGNNEESLFGVCESMYKPDLEPEELFEVIAQCLLAGSGRDC 180
Query: 180 VSGWGAVVYIIEQDKVTVRHVKTRMD 205
++GWG VV++I +DK R +K RMD
Sbjct: 181 LAGWGGVVHVISKDKRITRTLKGRMD 206
>gi|312067975|ref|XP_003136996.1| proteasome subunit beta type 3 [Loa loa]
Length = 192
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 134/192 (69%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M G +CV IA D R G Q T +A N +K+ ++G +Y+GL G +D +TV KI FR+NL
Sbjct: 1 MAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFHSDAKTVLDKITFRKNL 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
YEL+ENRK+ P+V M+SN+LY+ RFG YF EP++ GLDP T +P I MD IGC++ P
Sbjct: 61 YELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPYICAMDTIGCISAP 120
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
+DFV G ++ L G+CE W+ + D+LFE AQ++++A ER+A SGWG +VY I +D
Sbjct: 121 NDFVAVGTGTEYLLGVCEGFWKEGMNSDELFEATAQSMLSAMERDAASGWGVIVYTITKD 180
Query: 194 KVTVRHVKTRMD 205
KV V+ +K RMD
Sbjct: 181 KVNVKTIKARMD 192
>gi|18395025|ref|NP_564149.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
gi|288558823|sp|Q9XI05.2|PSB3A_ARATH RecName: Full=Proteasome subunit beta type-3-A; AltName: Full=20S
proteasome beta subunit C-1; AltName: Full=Proteasome
component T
gi|17473525|gb|AAL38246.1| proteasome subunit [Arabidopsis thaliana]
gi|21387087|gb|AAM47947.1| proteasome subunit [Arabidopsis thaliana]
gi|110740894|dbj|BAE98543.1| 20S proteasome beta subunit PBC2 like protein [Arabidopsis
thaliana]
gi|332192025|gb|AEE30146.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
Length = 204
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ+I ++ +++GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPY +P++ GL + +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE +++P++E ++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VYI+ ++ R +K RMD
Sbjct: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
>gi|195111614|ref|XP_002000373.1| GI22558 [Drosophila mojavensis]
gi|193916967|gb|EDW15834.1| GI22558 [Drosophila mojavensis]
Length = 203
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 138/197 (70%)
Query: 9 GSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIR 68
G ++AM GK+CVAI+ D+RF + + F+KIF + +Y+GL GL TD TV Q++
Sbjct: 7 GCVIAMRGKDCVAISTDRRFCLPSYTAGEEFEKIFNLAPRLYIGLTGLQTDILTVQQRLV 66
Query: 69 FRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIG 128
R++ YE+ ++PK+L ++S MLYE RF P++VEP++ G+DP T EP + +MDL+G
Sbjct: 67 HRRHAYEVNTGSLITPKILTELLSQMLYEHRFAPFYVEPIIAGMDPYTLEPYVSSMDLLG 126
Query: 129 CVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVY 188
C DFVV G C+DQ+ G CE+LW PNL+ D LFE I++A V + R+ +SG+GA VY
Sbjct: 127 CTIDSPDFVVVGTCTDQMLGTCESLWHPNLDSDGLFEAISRASVASGGRDIISGYGARVY 186
Query: 189 IIEQDKVTVRHVKTRMD 205
+IE DKVTVR ++TRMD
Sbjct: 187 LIEHDKVTVRLIRTRMD 203
>gi|217075224|gb|ACJ85972.1| unknown [Medicago truncatula]
Length = 204
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ+I ++ +++GL GLATD+
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E M P+ +++S+M YE+RFGPYF +P++ GL + +P
Sbjct: 61 QTLYQRLVFRHKLYQLREECDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++P++E ++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 180 SGWGGHVYVVTPTEVKERILKGRMD 204
>gi|357475641|ref|XP_003608106.1| Proteasome subunit beta type [Medicago truncatula]
gi|355509161|gb|AES90303.1| Proteasome subunit beta type [Medicago truncatula]
gi|388497742|gb|AFK36937.1| unknown [Medicago truncatula]
Length = 204
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
M+I +NG ++VAM GKNC AIA D+R G+Q +A +FQ+I ++ +Y+GL GLATD+
Sbjct: 1 MTIFKHNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLYIGLSGLATDS 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E M P+ +++S M YE+RFGPYF +P++ GL + +P
Sbjct: 61 QTLYQRLVFRHKLYQLREELDMKPETFASLVSAMQYEKRFGPYFCQPVIAGLGDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE++++P++E ++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 180 SGWGGHVYVVTPTEVKERILKGRMD 204
>gi|237830643|ref|XP_002364619.1| proteasome subunit beta type 3, putative [Toxoplasma gondii ME49]
gi|211962283|gb|EEA97478.1| proteasome subunit beta type 3, putative [Toxoplasma gondii ME49]
gi|221487700|gb|EEE25932.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
gi|221507494|gb|EEE33098.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 205
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 145/203 (71%), Gaps = 4/203 (1%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQ--GTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
YNG ++VAM GK+CV IA D R G+ GT AD FQK+F++ +H +VGL GLATD QTV
Sbjct: 4 YNGSAVVAMAGKDCVGIASDTRLGVNQFGTVSAD-FQKVFKMNNHTFVGLAGLATDVQTV 62
Query: 64 YQKIRFRQNLYELKEN-RKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
++++ FR NLY+L+E +M P+++ ++S+MLY RRF PYFV P+V GL PET +P +
Sbjct: 63 HKELVFRSNLYQLREEVTEMPPEIMSNVVSSMLYGRRFAPYFVSPVVAGLHPETHQPFLS 122
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
D IG DFV G ++QL G+CE+LW+P++ D+L ET++Q+L+ A +R+ V+G
Sbjct: 123 AFDYIGAACYAKDFVCNGTSAEQLVGVCESLWKPDMNEDELMETLSQSLLAAVDRDCVAG 182
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
WGAVV+++ + +T R +K RMD
Sbjct: 183 WGAVVHVLTPNTITTRRLKCRMD 205
>gi|328875472|gb|EGG23836.1| proteasome subunit beta type 3 [Dictyostelium fasciculatum]
Length = 201
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 143/202 (70%), Gaps = 1/202 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M YNGG+++ MTGKNCVAIA D RFGIQ +++N K++++ ++G+ GL TD QT+
Sbjct: 1 MAYNGGAVIVMTGKNCVAIATDLRFGIQHQTVSNNHPKVYRINDKCFIGISGLVTDAQTL 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
YQK+ FR NLY+L+E R M+P+VL ++ NMLYE+RFGPYF EP++ GLD + +P I
Sbjct: 61 YQKLVFRHNLYKLREERDMTPQVLSNLVGNMLYEKRFGPYFTEPVICGLDTQD-KPFISG 119
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
MDLIG DF++ G + +YG+CETL++ ++ D+LFET++Q ++++ ER+A+SGW
Sbjct: 120 MDLIGASVYTEDFLLVGTMTPAMYGLCETLYKKDMNEDELFETVSQCMLSSIERDAMSGW 179
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GA V II K + + R D
Sbjct: 180 GAEVTIITPAKTYKKKLLARQD 201
>gi|297845150|ref|XP_002890456.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|5263324|gb|AAD41426.1|AC007727_15 Identical to gb|Y13173 Arabidopsis thaliana mRNA for proteasome
subunit. EST gb|T76747 comes from this gene [Arabidopsis
thaliana]
gi|12744997|gb|AAK06878.1|AF344327_1 putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
gi|297336298|gb|EFH66715.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 142/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
M I YNG ++VAM GKNC AIA D+R G+Q +A +FQ+I ++ +++GL GLATD
Sbjct: 1 MQIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPY +P++ GL + +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE +++P++E ++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VYI+ ++ R +K RMD
Sbjct: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
>gi|56755093|gb|AAW25726.1| SJCHGC01130 protein [Schistosoma japonicum]
Length = 184
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 126/159 (79%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ +NG +++ M+GK+C AIACD RFG+ ++ +F K++ +G +YVG PGLATD
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV+Q+++FR+N+YEL+ENR + P+ + M+SN+LYERRFGPYFVEP+V G+D T++P
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLE 159
+ MDLIGCV + +DFVV G C++Q+YGMCETLWE N+
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMH 159
>gi|71029220|ref|XP_764253.1| proteasome subunit beta type 3 [Theileria parva strain Muguga]
gi|68351207|gb|EAN31970.1| proteasome subunit beta type 3, putative [Theileria parva]
Length = 206
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 145/204 (71%), Gaps = 2/204 (0%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
I +YNGG++VAM G+ CVAIACDKR G+ Q ++ NF K F+V + GLATD Q
Sbjct: 4 ITSYNGGAVVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQ 63
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
T+ ++I F+ N+Y+L+ +++MS K L M+ MLY RRFGP+FV+ ++ GLD +++ P I
Sbjct: 64 TLKEEIMFKVNMYKLRGDKEMSVKTLSNMVGAMLYSRRFGPWFVDSVIAGLDNDSS-PYI 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
DL+G PSDFVV G CS+QLYG+CE L++P ++P+ LFET++Q L+ +R+ +S
Sbjct: 123 TCFDLVGAPCTPSDFVVAGTCSEQLYGVCEALFKPGMDPEQLFETVSQCLMAGIDRDCLS 182
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA V++I D+V R +KTRMD
Sbjct: 183 GWGAEVHVITPDRVISRSLKTRMD 206
>gi|21553663|gb|AAM62756.1| putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
Length = 204
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 142/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YN ++VAM GKNC AIA D+R G+Q +A +FQ+I ++ +++GL GLATD
Sbjct: 1 MSIFEYNVSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPY +P++ GL + +P
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DFVV G S+ LYG CE +++P++E ++LFETI+QAL+++ +R+ +
Sbjct: 120 ICTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VYI+ ++ R +K RMD
Sbjct: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
>gi|356515898|ref|XP_003526634.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta
type-3-A-like [Glycine max]
Length = 204
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 141/205 (68%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q A +FQ+I ++ +++GL GLATD
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQPQTTATDFQRISKIHDKLFIGLXGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ F LY+L+E R M P+ +++S +LYE RFGPYF +P++ GL + +P
Sbjct: 61 QTLYQRLLFGHKLYQLREERDMKPQTFASLVSAILYENRFGPYFCQPVIAGLGDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MD IG DF V G S+ LYG CE++++P++EP++LFE I+QAL+++ +R+ +
Sbjct: 120 ICTMDAIGAKELAKDFAVAGTASESLYGACESMFKPDMEPEELFEMISQALLSSVDRDCL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG +Y++ +V R +K RMD
Sbjct: 180 SGWGGHIYVVTPTEVKERILKGRMD 204
>gi|145514570|ref|XP_001443190.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410568|emb|CAK75793.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 138/201 (68%), Gaps = 2/201 (0%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I YNGGSIV M GKNC+A+ACD+RFG Q + + N+QK+F++ ++ + L GL +D T
Sbjct: 4 IFEYNGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVFKIQDNILLALSGLNSDIHT 63
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
Y + NLY LKENRKM P ++++ LYERRFGP+FV P+V GL E +PI+
Sbjct: 64 FYALMEKEINLYNLKENRKMKPSTFANLVASSLYERRFGPFFVTPIVAGL--ENGKPILA 121
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
D IGC + DF VGG + +YG CE ++P+L P++L E I Q+LV+ C+R+++SG
Sbjct: 122 TYDSIGCKSDLDDFQVGGTGGNYIYGACEAFFKPDLSPEELEEVIGQSLVSGCDRDSLSG 181
Query: 183 WGAVVYIIEQDKVTVRHVKTR 203
WG VVY++ + K+TV+ +KT+
Sbjct: 182 WGGVVYVLTEQKLTVKILKTK 202
>gi|84997075|ref|XP_953259.1| proteasome beta 3 subunit [Theileria annulata strain Ankara]
gi|65304255|emb|CAI76634.1| proteasome beta 3 subunit, putative [Theileria annulata]
Length = 220
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 145/204 (71%), Gaps = 2/204 (0%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
I +YNGG++VAM G+ CVAIACDKR G+ Q ++ NF K F+V + GLATD Q
Sbjct: 18 ITSYNGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQ 77
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
T+ +I F+ N+Y+L+ +++MS K L M+ +MLY RRFGP+FV+ ++ GLD +++ P I
Sbjct: 78 TLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDTDSS-PYI 136
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
DL+G P+DFVV G CS+QLYG+CE L++P ++P+ LFET++Q L+ +R+ +S
Sbjct: 137 TCFDLVGAPCTPTDFVVAGTCSEQLYGVCEALFKPGMDPEQLFETVSQCLMAGIDRDCLS 196
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA V++I D+V R +KTRMD
Sbjct: 197 GWGAEVHVITPDRVISRSLKTRMD 220
>gi|145514243|ref|XP_001443032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410393|emb|CAK75635.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 138/201 (68%), Gaps = 2/201 (0%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I YNGGSIV M GKNC+A+ACD+RFG Q + + N+QK+F++ ++ + L GL +D T
Sbjct: 4 IFEYNGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVFKIQDNILLALSGLNSDIHT 63
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
Y + NLY LKENRKM P ++++ LYERRFGP+FV P+V GL E +PI+
Sbjct: 64 FYALMEKEINLYNLKENRKMKPTTFANLVASALYERRFGPFFVTPIVAGL--ENGKPILA 121
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
D IGC + DF VGG + +YG CE ++P+L P++L E I Q+LV+ C+R+++SG
Sbjct: 122 TYDSIGCKSDLDDFQVGGTGGNYIYGACEAFFKPDLSPEELEEVIGQSLVSGCDRDSLSG 181
Query: 183 WGAVVYIIEQDKVTVRHVKTR 203
WG VVY++ + K+TV+ +KT+
Sbjct: 182 WGGVVYVLTEQKLTVKILKTK 202
>gi|156088863|ref|XP_001611838.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154799092|gb|EDO08270.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 205
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 139/204 (68%), Gaps = 3/204 (1%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGT-ALADNFQKIFQVGSHMYVGLPGLATDTQ 61
I +YNGG++VAM G CVAIACDKR G+ G ++ NF K F+V Y GLATD Q
Sbjct: 4 IESYNGGAVVAMVGNGCVAIACDKRLGMNGQHTISSNFPKAFKVTDTAYFAACGLATDIQ 63
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
T+ +I F+ N+Y L+ + M K L M+ ++LY RRFGP+FV +V GLD +T P I
Sbjct: 64 TMKSEIEFKTNMYALRCEKNMGVKTLAHMVGSLLYSRRFGPWFVSSVVAGLDKDT--PHI 121
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
DLIG DFVV G CS+QLYG+CE+L+ PN+EP +LFETI+Q L+ A +R+ +S
Sbjct: 122 YCFDLIGAPCNAKDFVVVGTCSEQLYGICESLYRPNMEPSELFETISQCLMAAIDRDCLS 181
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA V++I +K+TV +KTRMD
Sbjct: 182 GWGAEVHMITPEKITVSTLKTRMD 205
>gi|449016282|dbj|BAM79684.1| 20S core proteasome subunit beta 3 [Cyanidioschyzon merolae strain
10D]
Length = 207
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 136/202 (67%), Gaps = 1/202 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ YNGG++ A TG CVAIA D+RFG LA + ++F+V + +GL GLATD T+
Sbjct: 7 LHYNGGAVFAATGNQCVAIAADRRFGQAQLTLACDANRLFRVHDRLVLGLTGLATDCLTL 66
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+++R R NLY L E R+ P + A++S +LYERRF PYFVEP++VGL + +P +
Sbjct: 67 AERVRMRTNLYRLGEKREPKPATISALVSALLYERRFAPYFVEPVIVGLSGDN-KPYCCS 125
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
MDL+G + +FV G C++ LYG ET W P L+P+DLFE AQ ++ A +R+ +SGW
Sbjct: 126 MDLLGTPMETDEFVAAGTCAESLYGTGETFWRPGLDPEDLFEVTAQCMLAALDRDCLSGW 185
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GAVVY++ + VTVR +K RMD
Sbjct: 186 GAVVYVLHSEGVTVRELKARMD 207
>gi|407859760|gb|EKG07148.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi]
Length = 205
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 136/205 (66%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+TY+GGS +AM G C I D R G Q ++ K+ + + +GL GL TD
Sbjct: 1 MSILTYSGGSCLAMAGDGCFVIVSDNRLGEQLKTISMEVPKLHVINESIVLGLTGLRTDQ 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT +K+RFR LY+L+E R++ K A++S+MLYE RFGP+FVEP++ +D T E
Sbjct: 61 QTFSEKVRFRNELYKLREEREIGGKAFAALVSSMLYEARFGPWFVEPVIASIDKRTGEVY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIG +P D+V G C++ L+GMCE LW P L P++LFE AQA+++AC+R+++
Sbjct: 121 LCAMDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLGPEELFEVAAQAMLSACDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG+GAV I+ +DK+T R + R D
Sbjct: 181 SGYGAVAAIVTRDKMTTRLINGRKD 205
>gi|452824977|gb|EME31976.1| proteasome beta subunit [Galdieria sulphuraria]
Length = 206
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 135/204 (66%), Gaps = 1/204 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SI+TYNGG ++AM G NCVAIA D+RFG+Q T + + +IF++ + +GL GL TD
Sbjct: 4 SILTYNGGCVLAMAGDNCVAIAADRRFGVQQTTIGTDTTRIFKINDRLMLGLTGLRTDVT 63
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
T+Y + R NLY L+E R++ P M+++ LY RRF PYFVEP+V GL E EP +
Sbjct: 64 TLYNRFVQRLNLYRLREEREIKPASFANMVASTLYSRRFSPYFVEPVVAGL-TEKGEPYL 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
DL+G DFVV G C++ LYG ET W+PNL P +LFE +Q+L+ A +R+ +S
Sbjct: 123 CAQDLLGAPLFAEDFVVSGTCAESLYGTSETFWKPNLSPAELFEVTSQSLLAAVDRDCLS 182
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA+V++I + + + +K RMD
Sbjct: 183 GWGAIVHMITLNGIETKVLKARMD 206
>gi|407424924|gb|EKF39197.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 205
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 137/205 (66%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+TY+GGS +AM G C I D R G Q ++ K+ + ++ +GL GL TD
Sbjct: 1 MSILTYSGGSCLAMAGDGCFVIVSDNRLGEQLKTISMEVPKLHVINDNIVLGLTGLRTDQ 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT +K+ FR LY+L+E R++ K A+IS+MLYE RFGP+FVEP++ +D T E
Sbjct: 61 QTFSEKVHFRTELYKLREEREIGGKAFAALISSMLYEARFGPWFVEPVIGSIDKRTGEVY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIG +P D+V G C++ L+GMCE LW P L P++LFE AQA+++AC+R+++
Sbjct: 121 LCAMDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLGPEELFEVAAQAMLSACDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG+GAV I+ +DK+T R +K R D
Sbjct: 181 SGYGAVAAIVTKDKMTTRLIKGRKD 205
>gi|198472849|ref|XP_002133126.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
gi|198139188|gb|EDY70528.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 134/201 (66%), Gaps = 3/201 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGI---QGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
GG ++AM GK CVAIA D R G G +A +F+K+F+VG M++GL G D TV+
Sbjct: 4 GGCVLAMQGKECVAIATDHRLGCGSNPGQRIAGDFKKVFKVGPRMFLGLTGFLADVNTVW 63
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
++++RQNLYE+KE+ +M+P+ M+SN+LYE RFGPY V+ +V LDP P I ++
Sbjct: 64 DRLQYRQNLYEIKESCEMTPEAFTTMLSNLLYEHRFGPYHVQAVVAALDPLALRPYICSV 123
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
DLIG + FV G C QL GMCETLW PNL+P+ LF T++Q L +A +RN GWG
Sbjct: 124 DLIGAPTKKDSFVFCGSCDKQLCGMCETLWTPNLDPEQLFLTMSQTLTHAFDRNITCGWG 183
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
A V+++++DK+ R + R D
Sbjct: 184 ATVFVLDKDKIMERVIDVRKD 204
>gi|403223804|dbj|BAM41934.1| proteasome subunit beta type [Theileria orientalis strain Shintoku]
Length = 206
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 138/204 (67%), Gaps = 2/204 (0%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
I YNGG++VAM G+ CVAIACDKR G Q + NF K F+V + + GLATD Q
Sbjct: 4 ITYYNGGAVVAMMGEGCVAIACDKRLGFNQQITVGSNFPKAFKVTDNCFFAASGLATDIQ 63
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
T+ +I F+ N+Y+++ ++M+ K L M+ MLY +RFGP+FV+ ++ GLD + EP I
Sbjct: 64 TLKDEIMFKVNMYQMRGEKQMNVKTLSNMVGTMLYSKRFGPWFVDSVIAGLDSKN-EPYI 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
DL+G P+DFVV G CS+QLYG+CE L+ P L D+LFETI+Q L+ +R+ +S
Sbjct: 123 TCFDLVGAPCTPTDFVVVGTCSEQLYGVCEALFRPGLNADELFETISQCLMAGIDRDCLS 182
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA V++I DKV R +KTRMD
Sbjct: 183 GWGAEVHVITPDKVVSRSLKTRMD 206
>gi|71650132|ref|XP_813770.1| proteasome beta 3 subunit [Trypanosoma cruzi strain CL Brener]
gi|71653810|ref|XP_815536.1| proteasome beta 3 subunit [Trypanosoma cruzi strain CL Brener]
gi|70878686|gb|EAN91919.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi]
gi|70880598|gb|EAN93685.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi]
Length = 205
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 136/205 (66%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+TY+GGS +AM G C I D R G Q ++ K+ + + +GL GL TD
Sbjct: 1 MSILTYSGGSCLAMAGDGCFVIVSDNRLGEQLKTISMEVPKLHVINESIVLGLTGLRTDQ 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT +K+RFR LY+L+E R++ K A+IS+MLYE RFGP+FVEP++ +D +T E
Sbjct: 61 QTFSEKVRFRNELYKLREEREIGGKAFAALISSMLYEARFGPWFVEPVIASIDKKTGEVY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIG +P D+V G C++ L+GMCE LW P L ++LFE AQA+++AC+R+++
Sbjct: 121 LCAMDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLGSEELFEVAAQAMLSACDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG+GAV I+ +DK+T R + R D
Sbjct: 181 SGYGAVAAIVTRDKMTTRLINGRKD 205
>gi|157871480|ref|XP_001684289.1| putative proteasome beta 3 subunit [Leishmania major strain
Friedlin]
gi|68127358|emb|CAJ04676.1| putative proteasome beta 3 subunit [Leishmania major strain
Friedlin]
Length = 205
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 138/205 (67%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+Y+GGS++AM GK C I DKR G Q ++ K+ V + + GL GL TD
Sbjct: 1 MSIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNNSIVYGLTGLRTDQ 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT K++FR ++Y+L+E R ++ K AMI++MLYE RFGP+FVEP++ +D T E
Sbjct: 61 QTFANKVQFRTDMYKLREERDITGKAFAAMITSMLYEARFGPWFVEPVIGSIDKSTGEVY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ DLIG +P D+V G ++ L+GMCE LW P + P+++FE AQA+++AC+R+++
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTAAESLHGMCEALWRPGMSPEEVFEIAAQAMLSACDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG+GAV I+ +DK+T R +K R D
Sbjct: 181 SGYGAVAMIVTKDKITTRLIKGRKD 205
>gi|429329532|gb|AFZ81291.1| proteasome subunit beta type 3, putative [Babesia equi]
Length = 217
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 136/215 (63%), Gaps = 13/215 (6%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
I +YNGG++VAM G CVAIACDKR G+ Q + NF K F+V + GLATD Q
Sbjct: 4 ISSYNGGAVVAMVGDQCVAIACDKRLGMNQQITIGTNFPKAFRVTDKSFFAASGLATDVQ 63
Query: 62 TVY-----------QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVV 110
T+Y ++I FR N+YE KMS L M+S MLY RRF P+FVE +V
Sbjct: 64 TMYVNHPCTPCCRKEEIEFRVNMYEASSESKMSINKLSNMVSTMLYSRRFSPWFVEAVVA 123
Query: 111 GLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQA 170
GLD + +P I DLIG P DFVV G C++QLYG+CE L++PN PD+LFE ++Q
Sbjct: 124 GLDAQN-KPFISCFDLIGAPCNPDDFVVAGTCAEQLYGICEALFKPNAGPDELFEIVSQC 182
Query: 171 LVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
L+ +R+ +SGWGA VYII +++R +KTRMD
Sbjct: 183 LMAGIDRDCLSGWGAQVYIITPTSISLRTLKTRMD 217
>gi|71755781|ref|XP_828805.1| proteasome subunit beta 3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834191|gb|EAN79693.1| proteasome beta 3 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 205
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 138/205 (67%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+TY+GGS +AM GK C + D R G Q ++ K++ + + +GL GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLYVINDGIVMGLTGLRTDQ 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT QK+ FR +Y+L+E R ++ K A++S+MLYE RFGP+FVEP++ +D +T E
Sbjct: 61 QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ DLIG +P D+V G C++ L+GMCE LW P LEP++LFE AQA+++AC+R+++
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG+GAV I+ +DK+ R +K R D
Sbjct: 181 SGYGAVAAIVTKDKLVTRLIKGRKD 205
>gi|146091504|ref|XP_001470046.1| putative proteasome beta 3 subunit [Leishmania infantum JPCM5]
gi|398017851|ref|XP_003862112.1| proteasome beta 3 subunit, putative [Leishmania donovani]
gi|134084840|emb|CAM69238.1| putative proteasome beta 3 subunit [Leishmania infantum JPCM5]
gi|322500341|emb|CBZ35418.1| proteasome beta 3 subunit, putative [Leishmania donovani]
Length = 205
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 137/205 (66%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+Y+GGS++AM GK C I DKR G Q ++ K+ V + GL GL TD
Sbjct: 1 MSIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNDSIVYGLTGLRTDQ 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT K++FR ++Y+L+E R ++ K AMI++MLYE RFGP+FVEP++ +D T E
Sbjct: 61 QTFANKVQFRTDMYKLREERDITGKAFAAMITSMLYEARFGPWFVEPVIGSIDKSTGEVY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ DLIG +P D+V G ++ L+GMCE LW P + P+++FE AQA+++AC+R+++
Sbjct: 121 LCATDLIGAPCEPQDYVCAGTAAESLHGMCEALWRPGMSPEEVFEIAAQAMLSACDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG+GAV I+ +DK+T R +K R D
Sbjct: 181 SGYGAVAMIVTKDKITTRLIKGRKD 205
>gi|323454510|gb|EGB10380.1| hypothetical protein AURANDRAFT_71184 [Aureococcus anophagefferens]
Length = 535
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 134/190 (70%), Gaps = 5/190 (2%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
++NG +IV M GKNCVAIA D RFG+ ++ +FQK+F+ ++VGL GLATD QT+
Sbjct: 193 SHNGAAIVCMAGKNCVAIASDTRFGLSQQTVSCDFQKVFKQSDRLFVGLAGLATDVQTLR 252
Query: 65 QKIRFRQN----LYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
++F++ LYEL+E R M P+ A++S+MLYE+RFGPYFVEP+V GL + P
Sbjct: 253 NTLKFKREPALALYELREERVMKPEAFAALLSHMLYEKRFGPYFVEPVVAGLK-DDGSPF 311
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIG D+VV G C+ L GMCE++W P++ PD+LFETI+Q L+ + +R+A+
Sbjct: 312 LCGMDLIGAPVYTDDYVVSGTCTPNLNGMCESMWRPDMGPDELFETISQCLLASVDRDAL 371
Query: 181 SGWGAVVYII 190
SGWGA V+++
Sbjct: 372 SGWGATVHVL 381
>gi|195161717|ref|XP_002021708.1| GL26359 [Drosophila persimilis]
gi|194103508|gb|EDW25551.1| GL26359 [Drosophila persimilis]
Length = 204
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGI---QGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
GG ++AM G CVAIA D R G G +A +F+K+F+VG M++GL G D TV+
Sbjct: 4 GGCVLAMQGNECVAIATDHRLGCGSNPGQRIAGDFKKVFKVGPRMFLGLTGFLADVNTVW 63
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
++++RQNLYE+KE+ +M+P+ M+SN+LYE RFGPY V+ +V LDP P I ++
Sbjct: 64 DRLQYRQNLYEIKESCEMTPEAFTTMLSNLLYEHRFGPYHVQAVVAALDPLALRPYICSV 123
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
DLIG + FV G C QL GMCETLW PNL+P+ LF T++Q L +A +RN GWG
Sbjct: 124 DLIGAPTKKDSFVFCGSCDKQLCGMCETLWTPNLDPEQLFLTMSQTLTHAFDRNITCGWG 183
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
A V+++++DK+ R + R D
Sbjct: 184 ATVFVLDKDKIMERVIDVRKD 204
>gi|349802615|gb|AEQ16780.1| putative proteasome beta 3 subunit [Pipa carvalhoi]
Length = 163
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 134/205 (65%), Gaps = 42/205 (20%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GK+CVAIA D+RFG+Q + +FQKIF +G +Y+GL GLA D
Sbjct: 1 MSIMSYNGGAVMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLA-DV 59
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELK P
Sbjct: 60 QTVSQRLKFRLNLYELK-----------------------------------------PF 78
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I ++DLIGC DFVV G CS+Q+YGMCE+LWEP++EP+DLFETI+QA++NA +R+AV
Sbjct: 79 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 138
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G VV++IE+DK+T R +K RMD
Sbjct: 139 SGMGVVVHVIEKDKITTRTLKARMD 163
>gi|17380264|sp|Q9NDA1.1|PSB3_TRYBB RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome subunit beta-3
gi|9622232|gb|AAF89685.1|AF169653_1 20S proteasome beta 3 subunit [Trypanosoma brucei]
gi|261334718|emb|CBH17712.1| proteasome beta 3 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 205
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 137/205 (66%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+TY+GGS +AM GK C + D R G Q ++ K+ + + +GL GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQ 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT QK+ FR +Y+L+E R ++ K A++S+MLYE RFGP+FVEP++ +D +T E
Sbjct: 61 QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ DLIG +P D+V G C++ L+GMCE LW P LEP++LFE AQA+++AC+R+++
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG+GAV I+ +DK+ R +K R D
Sbjct: 181 SGYGAVAAIVTKDKLVTRLIKGRKD 205
>gi|449673686|ref|XP_002167313.2| PREDICTED: proteasome subunit beta type-3-like, partial [Hydra
magnipapillata]
Length = 142
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 115/138 (83%)
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+FR NLYEL+ENRK+SPKV + ++SN+LY RRFGPYFVEP++ GL P+T EP I + DLI
Sbjct: 5 KFRTNLYELRENRKISPKVFMTIMSNILYGRRFGPYFVEPLIAGLHPKTNEPYIASCDLI 64
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
GC +P DFVV G C DQLYGMCE+LWEP+LEP+ LFE I+QAL+NA +R+ +SGWGAVV
Sbjct: 65 GCPCEPEDFVVSGTCGDQLYGMCESLWEPDLEPEALFEVISQALLNAQDRDCLSGWGAVV 124
Query: 188 YIIEQDKVTVRHVKTRMD 205
+IIE+DK+T + +K RMD
Sbjct: 125 HIIEKDKITTKTLKARMD 142
>gi|401424718|ref|XP_003876844.1| putative proteasome beta 3 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493088|emb|CBZ28372.1| putative proteasome beta 3 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 205
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 137/205 (66%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+Y+GGS++AM GK C I DKR G Q ++ K+ V + GL GL TD
Sbjct: 1 MSIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNDSIVYGLTGLRTDQ 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT K++FR ++Y+L+E R ++ K +MI++MLYE RFGP+FVEP++ +D T +
Sbjct: 61 QTFVNKVQFRTDMYKLREERNITGKAFSSMITSMLYEARFGPWFVEPVIGSIDKSTGKVY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ DLIG +P D+V G ++ L+GMCE LW P + P+++FE AQA+++AC+R+++
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTAAESLHGMCEALWRPGMSPEEVFEIAAQAMLSACDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG+GAV I+ +DK+T R +K R D
Sbjct: 181 SGYGAVAMIVTKDKITTRLIKGRKD 205
>gi|145341760|ref|XP_001415971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576194|gb|ABO94263.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 206
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 141/207 (68%), Gaps = 3/207 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATD 59
MSIM+YNG +++AMTGK+CVAIA D R GI Q A ++ K+ ++ +Y+GL GL D
Sbjct: 1 MSIMSYNGAAVIAMTGKDCVAIASDLRLGINQNQTAAVDYSKLHKIHDRLYLGLTGLIAD 60
Query: 60 TQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
T+ QK++F+ ++YEL+ENR MSPKV A++S LYE+RF PY+ EP+V GLD + +P
Sbjct: 61 QLTLAQKLKFKHDMYELRENRVMSPKVFGAVVSATLYEKRFSPYYTEPVVAGLDAD-GKP 119
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
I +MDLIG DFVV G + L+G+CE+ ++ +L+P+ LFE I+ L + R+
Sbjct: 120 YITSMDLIGADASTDDFVVAGDNVESLFGVCESFYKRDLDPEALFEVISHCLTSGVNRDC 179
Query: 180 VSGWGAVVYIIEQDKVT-VRHVKTRMD 205
+SGWG VV ++ + T R +K+RMD
Sbjct: 180 LSGWGGVVTVVTKGNGTFTRTLKSRMD 206
>gi|12323391|gb|AAG51672.1|AC010704_16 putative 20S proteasome beta subunit PBC2; 7006-8626 [Arabidopsis
thaliana]
Length = 191
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 134/192 (69%), Gaps = 1/192 (0%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GKNC AIA D+R G+Q +A +FQ+I ++ H+++GL GLATD QT+YQ++ FR L
Sbjct: 1 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKL 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y+L+E R M P+ +++S +LYE+RFGP+ +P++ GL + +P I MD IG
Sbjct: 61 YQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDN-KPFICTMDSIGAKELA 119
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DFVV G S+ LYG CE +++P++E ++LFETI+QAL+++ +R+ +SGWG VY++
Sbjct: 120 KDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPK 179
Query: 194 KVTVRHVKTRMD 205
+V R +K RMD
Sbjct: 180 EVKERILKGRMD 191
>gi|300120261|emb|CBK19815.2| unnamed protein product [Blastocystis hominis]
Length = 205
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 134/203 (66%), Gaps = 1/203 (0%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
IM+YNG +++AM GKNCVAIA D R G Q + NFQKI+++ +++G GL +D QT
Sbjct: 4 IMSYNGAAVIAMKGKNCVAIASDLRLGAQFQTVDCNFQKIYKMTDQIFIGFNGLQSDAQT 63
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
Q + + N Y+L+ENR +SP+ +++ Y+ R+GPYFVEP++ GLD + EP +
Sbjct: 64 FAQLLTYEVNSYKLRENRDISPEAFGSLVRTKQYQHRWGPYFVEPVIAGLD-KNGEPYVN 122
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
MD IG F + C++ LYG CE ++ N+EP++LFE I+Q L+ + +R+A SG
Sbjct: 123 AMDTIGAGIYTPKFAISATCAESLYGTCEAFYKDNMEPEELFEVISQCLLASVDRDAYSG 182
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
WG +VYII D++ R +KTRMD
Sbjct: 183 WGGIVYIITPDRIIERRLKTRMD 205
>gi|343471879|emb|CCD15804.1| unnamed protein product [Trypanosoma congolense IL3000]
gi|343474036|emb|CCD14226.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 205
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 138/205 (67%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+TY+GGS +AM GK C I D R G ++ + K+ + + +GL GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVIISDNRLGEGLKTISMDVPKLHVINDGIVMGLTGLRTDQ 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT QK+RFR +Y+L+E R+++ K A++++MLYE RFGP+FVEP++ +D +T E
Sbjct: 61 QTFAQKVRFRTEMYKLREEREINGKAFAALVASMLYEARFGPWFVEPVIGTIDRKTGEVY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ DLIG +P D+V G C++ L+GMCE LW P LE ++LFE AQA+++AC+R+++
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEAEELFEIAAQAMLSACDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG+GAV I+ +DK+ R ++ R D
Sbjct: 181 SGYGAVAAIVTKDKLITRLIRGRKD 205
>gi|156095029|ref|XP_001613550.1| 20S proteasome subunit beta-3 [Plasmodium vivax Sal-1]
gi|148802424|gb|EDL43823.1| 20S proteasome subunit beta-3, putative [Plasmodium vivax]
Length = 218
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 140/216 (64%), Gaps = 12/216 (5%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQG-TALADNFQKIFQVGSHMYVGLPGLATDT 60
SI YNGG ++ M+G CVAIACD R G T ++ NF KIF++ ++YVGL GLATD
Sbjct: 3 SIFNYNGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDI 62
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVG------LDP 114
QT+Y+ +R+R NLYE+++ M M+S++LY RF PYFV P+VVG LD
Sbjct: 63 QTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDD 122
Query: 115 E-----TAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQ 169
E + EP + DLIG + DFVV G S+QLYGMCE+L+ + + D LFETI+Q
Sbjct: 123 EGKKVCSFEPYLTAYDLIGAKCETKDFVVNGVTSEQLYGMCESLYIKDQDKDGLFETISQ 182
Query: 170 ALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
L++A +R+ +SGWGA VY++ D + + +K RMD
Sbjct: 183 CLLSALDRDCLSGWGAEVYVLTPDTIMKKKLKARMD 218
>gi|154340181|ref|XP_001566047.1| putative proteasome beta 3 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063366|emb|CAM39542.1| putative proteasome beta 3 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 205
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 134/205 (65%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+Y+GGS++AM GK C I DKR G Q ++ K+ V + GL GL TD
Sbjct: 1 MSIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISMEVPKLHIVNDSVVYGLTGLRTDQ 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT K+ FR N+Y+L+E R ++ K AMI +MLYE RFGP+FVEP++ +D T E
Sbjct: 61 QTFANKVEFRINMYKLREERDITGKAFAAMIESMLYEARFGPWFVEPVIGSIDKTTGEVY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ DLIG +P D+V G ++ L+GMCE LW P + P+++FE AQA+++AC+R+++
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTAAESLHGMCEALWRPGMSPEEVFEIAAQAMLSACDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG+GAV I+ ++K+ R +K R D
Sbjct: 181 SGYGAVALIVTKEKIITRLIKGRKD 205
>gi|66358224|ref|XP_626290.1| possible proteasome component [Cryptosporidium parvum Iowa II]
gi|46228012|gb|EAK88932.1| possible proteasome component [Cryptosporidium parvum Iowa II]
Length = 204
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 136/205 (66%), Gaps = 2/205 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQG-TALADNFQKIFQVGSHMYVGLPGLATDT 60
SIMTYNGG+I+AM GK CVA A D R G G ++ +F K+ + S +G GLATD
Sbjct: 1 SIMTYNGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ I+F+ NLY L+E R++ K L M +++LY +RF PYFVEP+V GLD P
Sbjct: 61 HTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNV-PF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I DLIGC++ S+F + G +QL+G+CE+ + P+LEPD+L E ++Q +++ +R+A
Sbjct: 120 IAGYDLIGCLSVCSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGIDRDAF 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +K+ + +K+RMD
Sbjct: 180 SGWGCKVYLLTPEKLVTKTLKSRMD 204
>gi|430813166|emb|CCJ29467.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 179
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 128/181 (70%), Gaps = 2/181 (1%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIA D R G G + ++F KI V +Y+GL GLATD T+ IR+ NL
Sbjct: 1 MLGKDCVAIASDLRLGKGGLMVTNDFSKIIPVTEKIYMGLSGLATDIVTLL--IRYNVNL 58
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y+L+E R + PK L ++S +LY++RF YFV P++ GLD +T P I +D IGC++
Sbjct: 59 YKLQEERVIEPKTLANLLSTVLYKKRFATYFVMPILAGLDSKTGRPFICGLDNIGCLDIA 118
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
DFV+ G S+QLYG+CE LWEP LEPDDLFETI+QAL+NA +R+A+SG G VVY+I +D
Sbjct: 119 KDFVISGTASEQLYGICECLWEPGLEPDDLFETISQALLNAQDRDALSGMGCVVYVITKD 178
Query: 194 K 194
K
Sbjct: 179 K 179
>gi|330318776|gb|AEC11048.1| 20S proteasome beta subunit pbc2 [Camellia sinensis]
Length = 187
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 133/188 (70%), Gaps = 1/188 (0%)
Query: 18 NCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELK 77
NC AIA D+R G+Q +A +FQ+I+++ + +GL GLATD+QT+YQ++ FR LY+L+
Sbjct: 1 NCFAIASDRRLGVQLQTIATDFQRIYKIHDKLSIGLAGLATDSQTMYQRLVFRHKLYQLR 60
Query: 78 ENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFV 137
E R M P+ +++S +LYE+RFGPYF +P++ GL + +P I MD IG DFV
Sbjct: 61 EERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGDDD-KPFICTMDSIGAKELAKDFV 119
Query: 138 VGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTV 197
V G S+ LYG CE +++P++E ++LFETI+QAL+++ +R+ +SGWG VY++ +VT
Sbjct: 120 VAGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVTE 179
Query: 198 RHVKTRMD 205
R +K RMD
Sbjct: 180 RILKGRMD 187
>gi|294879946|ref|XP_002768837.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239871775|gb|EER01555.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 444
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 140/205 (68%), Gaps = 2/205 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDT 60
+IM YNGGS++AM G+ CV IACD+R+G+ Q ++ N QK++ + S VG GLATD+
Sbjct: 241 NIMEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDS 300
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+ Q ++FR LY+LKE+R+M V+ +++ MLYE+RFGPYF EP++ GL + EP
Sbjct: 301 QTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKND-GEPF 359
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I + DLIG + DF+V G ++QL G+ E+ W + P++L E + Q+L++ +R+ +
Sbjct: 360 ISSFDLIGTESTAPDFIVSGTATEQLMGVAESFWREGMGPEELAEVLGQSLLSGIDRDCL 419
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VVYI+ ++ + +K RMD
Sbjct: 420 SGWGGVVYILTDKELITKTLKGRMD 444
>gi|294929626|ref|XP_002779296.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239888359|gb|EER11091.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 444
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 140/205 (68%), Gaps = 2/205 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDT 60
+IM YNGGS++AM G+ CV IACD+R+G+ Q ++ N QK++ + S VG GLATD+
Sbjct: 241 NIMEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDS 300
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+ Q ++FR LY+LKE+R+M V+ +++ MLYE+RFGPYF EP++ GL + EP
Sbjct: 301 QTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKND-GEPF 359
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I + DLIG + DF+V G ++QL G+ E+ W + P++L E + Q+L++ +R+ +
Sbjct: 360 ISSFDLIGTESTAPDFIVSGTATEQLMGVAESFWREGMGPEELAEVLGQSLLSGIDRDCL 419
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VVYI+ ++ + +K RMD
Sbjct: 420 SGWGGVVYILTDKELITKTLKGRMD 444
>gi|412992168|emb|CCO19881.1| predicted protein [Bathycoccus prasinos]
Length = 209
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 131/194 (67%), Gaps = 2/194 (1%)
Query: 13 AMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQ 71
AM G CVAIA D R GI Q A +FQKIFQ+ +++ + GLA+D T+ F+
Sbjct: 17 AMCGHECVAIASDNRLGINQQQTTAIDFQKIFQIHPRLFLAMSGLASDMHTLKATFEFKH 76
Query: 72 NLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVN 131
LYEL+ENR M PK +++S LYE+RFGPY+VEP++ GLD + ++P I MDLIG
Sbjct: 77 KLYELRENRVMEPKTFASVVSTTLYEKRFGPYYVEPVIAGLD-KASKPYITGMDLIGAAA 135
Query: 132 QPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIE 191
+FVV G S+ L+G+CE++++ NLEP++LFE I+Q L++ R+ +SGWG VY+I
Sbjct: 136 PTENFVVAGNNSESLFGVCESMYKENLEPEELFEVISQCLLSGSGRDCLSGWGGTVYVIT 195
Query: 192 QDKVTVRHVKTRMD 205
+D V V+ VK RMD
Sbjct: 196 KDGVEVKSVKGRMD 209
>gi|118376326|ref|XP_001021345.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89303112|gb|EAS01100.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 209
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 136/203 (66%), Gaps = 3/203 (1%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+YNGGS++AM G+ CVAI D+R G Q +A NFQK+F++ ++ +GL GLATD QT
Sbjct: 5 FSYNGGSMLAMKGEQCVAIGADRRLGAQFQTVATNFQKVFRIQDNILLGLTGLATDVQTF 64
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAE---PI 120
++ I+++ NLY L+EN+ M + +IS LYE+R+GPYFV P+V GL+ + + PI
Sbjct: 65 HRLIQYKVNLYRLRENKDMKVNTFVNLISATLYEKRWGPYFVSPIVAGLEYDEVKGVIPI 124
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
D IGC + +F VGG +D L G CE+ W L+PD+L + +AQ+L C+R+ +
Sbjct: 125 TATYDSIGCTSIEGEFQVGGTGADGLIGSCESFWRKGLKPDELEDIVAQSLSAGCDRDIL 184
Query: 181 SGWGAVVYIIEQDKVTVRHVKTR 203
SGWG VVY + +D ++V+ +KT+
Sbjct: 185 SGWGGVVYTLTKDNLSVKVLKTK 207
>gi|281209309|gb|EFA83482.1| p21-activated protein kinase [Polysphondylium pallidum PN500]
Length = 1404
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 132/198 (66%), Gaps = 19/198 (9%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGG+++ MTGK+CVAIA D RFGIQ T ++ N K++++ ++G+ GL TD
Sbjct: 1 MSIMEYNGGAVIVMTGKDCVAIATDLRFGIQHTTVSTNNPKVYRISDKCFIGISGLVTDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQK+ FR NLY+LKE R MSP+VL ++SNMLYE+RFGPYF EP++ GLD +P
Sbjct: 61 QTLYQKLVFRHNLYKLKEERDMSPQVLTNLVSNMLYEKRFGPYFTEPVICGLDSNN-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I MDLIG Q DF++ G + +YG+CETL++ ++ R+A+
Sbjct: 120 ISGMDLIGAPVQTDDFLLVGTMTPAMYGLCETLYKKDM------------------RDAM 161
Query: 181 SGWGAVVYIIEQDKVTVR 198
SGWGA V +I DKV R
Sbjct: 162 SGWGAEVTVICPDKVFRR 179
>gi|403374952|gb|EJY87444.1| Proteasome subunit beta type-3 [Oxytricha trifallax]
Length = 208
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 137/208 (65%), Gaps = 3/208 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG S+VAM+GKNCVAIA D R Q + +FQ++F+V +G+ GL TD
Sbjct: 1 MSIFDYNGNSMVAMSGKNCVAIATDTRLSTQLMTVDTSFQRVFKVTDQCLMGVSGLGTDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDP---ETA 117
QT ++F+ N+Y LKE R+M + +++ LYE+RFGPYFV P+V GLD
Sbjct: 61 QTFNSLMKFKLNMYRLKEGREMKSETFSKLVATSLYEKRFGPYFVSPVVAGLDKISDTEY 120
Query: 118 EPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACER 177
+P+I D IG + +F V G ++ LYG+CET + PNLEP++LF+ I+ +L++A +R
Sbjct: 121 KPVICTYDSIGYRSNNGEFEVAGTGAELLYGVCETFYRPNLEPEELFQVISNSLLSALDR 180
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+++SGWG+ VYI+ ++ VR +KTR D
Sbjct: 181 DSLSGWGSKVYILTPTELIVRSLKTRQD 208
>gi|340058923|emb|CCC53294.1| putative proteasome beta 3 subunit [Trypanosoma vivax Y486]
Length = 205
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 135/205 (65%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM Y+GGS +AM GK C + D R G Q ++ K+ + + +GL GL TD
Sbjct: 1 MSIMAYSGGSCLAMAGKECFVVISDNRLGEQLKTISTEVPKLHVINDSIVLGLTGLRTDQ 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT QK+ FR +Y+L E R+++ K A++ +MLYE RFGP+FVEP++ +D +T E
Sbjct: 61 QTFAQKVHFRTEMYKLCEEREINGKAFAALVMSMLYEARFGPWFVEPVIGSIDRKTGEVY 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ DLIG +P D+V G C++ L+GMCE LW+P L P++LFE AQA+++AC+R+++
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWQPGLAPEELFEVAAQAMLSACDRDSL 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG+GAV I+ ++K+ + ++ R D
Sbjct: 181 SGYGAVAVIVTREKIVTKLIRGRKD 205
>gi|340506918|gb|EGR32962.1| hypothetical protein IMG5_065490 [Ichthyophthirius multifiliis]
Length = 220
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 141/213 (66%), Gaps = 16/213 (7%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV-- 63
YNGG+++ M G CVAI+CD+R G Q +A NFQK+F++ ++ +GL GLATD QT+
Sbjct: 7 YNGGAMIGMKGNGCVAISCDRRLGAQFQTVACNFQKVFKIQDNILLGLTGLATDVQTLQI 66
Query: 64 -------------YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVV 110
++++ F+ NLY L+ENR M + + +IS LYE+R+GPYFV+P+V+
Sbjct: 67 KKNIQILNQFLKSHRQMEFKVNLYRLRENRDMKVETFINLISAALYEKRWGPYFVQPIVI 126
Query: 111 GLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQA 170
GL+ + P++ + D IGC + +F VGG D L G CE++W +L P+ L + +AQA
Sbjct: 127 GLE-DGKTPMVASYDSIGCTSTNENFQVGGTAGDGLIGSCESMWRDDLTPEQLEDVVAQA 185
Query: 171 LVNACERNAVSGWGAVVYIIEQDKVTVRHVKTR 203
L+ +R+ +SGWG +VY+I +DK+TV+ +K++
Sbjct: 186 LLAGADRDILSGWGGIVYVITKDKITVKVLKSK 218
>gi|67606993|ref|XP_666789.1| proteasome component [Cryptosporidium hominis TU502]
gi|54657844|gb|EAL36555.1| proteasome component [Cryptosporidium hominis]
Length = 202
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 133/203 (65%), Gaps = 2/203 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQG-TALADNFQKIFQVGSHMYVGLPGLATDTQT 62
MTYNGG+I+AM GK CVA A D R G G + +F K+ + S +G GLATD T
Sbjct: 1 MTYNGGAILAMKGKECVAFATDMRLGSNGYRTIGTDFDKVIRPSSKTLMGFSGLATDIHT 60
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+ I+F+ NLY L+E R++ K L M +++LY +RF PYFVEP+V GLD P I
Sbjct: 61 LTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNV-PFIA 119
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
DLIGC++ S+F + G +QL+G+CE+ + P+LEPD+L E ++Q +++ +R+A SG
Sbjct: 120 GYDLIGCLSVCSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGIDRDAFSG 179
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
WG VY++ +K+ + +K+RMD
Sbjct: 180 WGCKVYLLTPEKLVTKTLKSRMD 202
>gi|384483641|gb|EIE75821.1| hypothetical protein RO3G_00525 [Rhizopus delemar RA 99-880]
Length = 172
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 124/188 (65%), Gaps = 27/188 (14%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M YNGGS+VAM GK+CVAIA DKR G Q ++ +FQKIF+ ++GLPGLATD T+
Sbjct: 1 MQYNGGSVVAMVGKDCVAIAADKRLGAQFMTVSTDFQKIFKATDKTFIGLPGLATDVLTL 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ RF+ N+ FGPYFVEP+V GL + +P I
Sbjct: 61 ADRFRFKTNI--------------------------FGPYFVEPVVAGLGKDN-KPFICA 93
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
MDLIGC+N DFVV G LYGMCE+LWEP+LEP+DLFETI+QAL+NA +R+A+SGW
Sbjct: 94 MDLIGCINFAKDFVVSGTAGPNLYGMCESLWEPDLEPEDLFETISQALLNAQDRDALSGW 153
Query: 184 GAVVYIIE 191
GAVVY+++
Sbjct: 154 GAVVYVMQ 161
>gi|294948700|ref|XP_002785851.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239899959|gb|EER17647.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 202
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 138/203 (67%), Gaps = 2/203 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
M YNGGS++AM G+ CV IACD+R+G+ Q ++ N QK++ + S VG GLATD+QT
Sbjct: 1 MEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDSQT 60
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+ Q ++FR LY+LKE+R+M V+ +++ MLYE+RFGPYF EP++ GL + EP I
Sbjct: 61 LSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKND-GEPFIS 119
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
+ DLIG + DF+V G ++QL G+ E+ W + P++L E + Q+L++ +R+ +SG
Sbjct: 120 SFDLIGTESTAPDFIVSGTATEQLMGVAESFWREGMGPEELAEVLGQSLLSGIDRDCLSG 179
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
WG +VYI+ ++ + +K RMD
Sbjct: 180 WGGMVYILTDKELITKTLKGRMD 202
>gi|14594927|emb|CAC43324.1| putative beta 3 proteasome subunit [Nicotiana tabacum]
Length = 178
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ+IF++ +++GL GL TD
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFRIHDKVFIGLSGLGTDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+YQ++ FR LY+L+E R M P+ +++S +LYE+RFGPYF +P++ GL + +P
Sbjct: 61 LTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDD-KPF 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERN 178
I MD IG DFVV G S+ LYG CE +++P++ P++LFETI+QAL+ + +R+
Sbjct: 120 ICTMDSIGAKELAKDFVVAGTASESLYGACEAMFKPDMGPEELFETISQALIASVDRD 177
>gi|37779068|gb|AAP20194.1| proteasome subunit [Pagrus major]
Length = 140
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 112/140 (80%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVA+A D+RFGIQ + +FQK+F +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAVAADRRFGIQAQMVTTDFQKVFPMGERLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ PK ++M+SN+LYERRFGPY++EP++ GLDP+T EP
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 121 IGNMDLIGCVNQPSDFVVGG 140
I ++DLIGC DFVV G
Sbjct: 121 ICSLDLIGCPMVTEDFVVSG 140
>gi|68069127|ref|XP_676474.1| beta3 proteasome subunit [Plasmodium berghei strain ANKA]
gi|56496189|emb|CAH97578.1| beta3 proteasome subunit, putative [Plasmodium berghei]
Length = 204
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 132/204 (64%), Gaps = 12/204 (5%)
Query: 14 MTGKNCVAIACDKRFGIQG-TALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQN 72
MTG CVAIACD R G T ++ NF KIF++ H+YVGL GLATD Q++Y+ +R+R N
Sbjct: 1 MTGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 73 LYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA-----------EPII 121
LY++++ M+ M+SN+LY RF PYFV P+VVG T EP +
Sbjct: 61 LYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKTNVYEPYL 120
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
DLIG + SDFVV G ++QLYGMCE+++ + + + LFET++Q L++A +R+ +S
Sbjct: 121 NAYDLIGAKCETSDFVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQCLLSALDRDCLS 180
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VY++ DK+ + +K RMD
Sbjct: 181 GWGAEVYVLTPDKIIKKKLKARMD 204
>gi|70944654|ref|XP_742236.1| beta3 proteasome subunit [Plasmodium chabaudi chabaudi]
gi|56521097|emb|CAH75996.1| beta3 proteasome subunit, putative [Plasmodium chabaudi chabaudi]
Length = 204
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 133/204 (65%), Gaps = 12/204 (5%)
Query: 14 MTGKNCVAIACDKRFGIQG-TALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQN 72
M+G CVAIACD R G T ++ NF KIF++ H+YVGL GLATD Q++Y+ +R+R N
Sbjct: 1 MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 73 LYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA-----------EPII 121
LY++++ +M+ M+SN+LY RF PYFV P+VVG T EP +
Sbjct: 61 LYQIRQETEMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVTTQVDENGNKTNVYEPYL 120
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
DLIG + +DFVV G ++QLYGMCE+++ + + + LFET++Q L++A +R+ +S
Sbjct: 121 NAYDLIGAKCETNDFVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQCLLSALDRDCLS 180
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VY++ DK+ + +K RMD
Sbjct: 181 GWGAEVYVLTPDKIIKKKLKARMD 204
>gi|82704967|ref|XP_726772.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482323|gb|EAA18337.1| 7006-8626 [Plasmodium yoelii yoelii]
Length = 204
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 132/204 (64%), Gaps = 12/204 (5%)
Query: 14 MTGKNCVAIACDKRFGIQG-TALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQN 72
M+G CVAIACD R G T ++ NF KIF++ H+YVGL GLATD Q++Y+ +R+R N
Sbjct: 1 MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 73 LYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA-----------EPII 121
LY++++ M+ M+SN+LY RF PYFV P+VVG T EP +
Sbjct: 61 LYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKINVYEPYL 120
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
DLIG + +DFVV G ++QLYGMCE+++ + + + LFET++Q L++A +R+ +S
Sbjct: 121 NAYDLIGAKCETNDFVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQCLLSALDRDCLS 180
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VY++ DK+ + +K RMD
Sbjct: 181 GWGAEVYVLTPDKIIKKKLKARMD 204
>gi|221052302|ref|XP_002257727.1| beta3 proteasome subunit [Plasmodium knowlesi strain H]
gi|193807558|emb|CAQ38063.1| beta3 proteasome subunit, putative [Plasmodium knowlesi strain H]
Length = 204
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 131/204 (64%), Gaps = 12/204 (5%)
Query: 14 MTGKNCVAIACDKRFGIQG-TALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQN 72
M+G CVAIACD R G T ++ NF K+F++ ++YVGL GLATD QT+Y+ +R+R N
Sbjct: 1 MSGAQCVAIACDLRLGANNFTTISTNFTKVFKMNDYVYVGLSGLATDIQTLYELLRYRVN 60
Query: 73 LYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGL------DPE-----TAEPII 121
LYE+++ M M+S++LY RF PYFV P+VVG D E T EP +
Sbjct: 61 LYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVKHTFDDEGKKIRTFEPYL 120
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
DLIG + DFVV G S+QLYGMCE+L+ + + D LFETI+Q L++A +R+ +S
Sbjct: 121 TAYDLIGAKCETKDFVVNGVTSEQLYGMCESLYIKDQDKDGLFETISQCLLSALDRDCLS 180
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VY++ D + + +K RMD
Sbjct: 181 GWGAEVYVLTPDSIMKKKLKARMD 204
>gi|389581871|dbj|GAB64592.1| 20S proteasome subunit beta-3 [Plasmodium cynomolgi strain B]
Length = 204
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 132/204 (64%), Gaps = 12/204 (5%)
Query: 14 MTGKNCVAIACDKRFGIQG-TALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQN 72
M+G CVAIACD R G T ++ NF KIF++ ++YVGL GLATD QT+Y+ +R+R N
Sbjct: 1 MSGAQCVAIACDLRLGANNFTTISTNFTKIFKMNDYVYVGLSGLATDIQTLYELLRYRVN 60
Query: 73 LYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVG------LDPE-----TAEPII 121
LYE+++ M M+S++LY RF PYFV P+VVG +D E T EP +
Sbjct: 61 LYEIRQESPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVKHTIDDEGKKISTFEPYL 120
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
DLIG + +DFVV G +QLYGMCE+L+ + + D LFETI+Q L++A +R+ +S
Sbjct: 121 TAYDLIGAKCETNDFVVNGVTGEQLYGMCESLYIKDQDKDGLFETISQCLLSALDRDCLS 180
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA VY++ D + + +K RMD
Sbjct: 181 GWGAEVYVLTPDTIMKKKLKARMD 204
>gi|209878806|ref|XP_002140844.1| proteasome subunit beta type 3 [Cryptosporidium muris RN66]
gi|209556450|gb|EEA06495.1| proteasome subunit beta type 3, putative [Cryptosporidium muris
RN66]
Length = 194
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 128/195 (65%), Gaps = 2/195 (1%)
Query: 12 VAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFR 70
+AM GKNC+AIA D R G Q + ++ +F K+ S +G GLATD TV I+F
Sbjct: 1 MAMKGKNCIAIATDMRMGFNQFSTISTSFNKVINPSSKTLIGFSGLATDIHTVSSTIKFH 60
Query: 71 QNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCV 130
NLY+L+E R++ K L M +++LY +RF PY VEP+V GLD + EP + DLIGC+
Sbjct: 61 TNLYKLREEREIDAKALSHMTASLLYSKRFSPYLVEPIVAGLD-KNNEPYLAGYDLIGCL 119
Query: 131 NQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYII 190
++ SDF + G QL+G+CE+ ++P+++ D L ETI+Q ++ +R+A+SGWG +Y++
Sbjct: 120 SKCSDFAISGTADRQLFGICESFYKPDMDTDQLMETISQCMLAGLDRDALSGWGCTIYLL 179
Query: 191 EQDKVTVRHVKTRMD 205
++ + +K+RMD
Sbjct: 180 TPTQLITKKLKSRMD 194
>gi|241614198|ref|XP_002406585.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
gi|215500837|gb|EEC10331.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
Length = 140
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 107/137 (78%)
Query: 45 VGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF 104
+G +Y GL GLATD QTV Q+++FR N+YEL+E R++ PK +++SN+LYERRFGPYF
Sbjct: 1 MGPKLYCGLSGLATDVQTVAQRLKFRINMYELREGRRIKPKTFSSVVSNILYERRFGPYF 60
Query: 105 VEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLF 164
E ++ GLDP T EP I + DLIGC+++P DFVV G C +Q +GMCE LWEP+L PD+LF
Sbjct: 61 TEALIAGLDPITNEPYIASTDLIGCISEPEDFVVSGTCEEQCFGMCEALWEPDLGPDELF 120
Query: 165 ETIAQALVNACERNAVS 181
E I+QALVNA +R+A S
Sbjct: 121 EVISQALVNAFDRDASS 137
>gi|308799609|ref|XP_003074585.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
gi|116000756|emb|CAL50436.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
Length = 203
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 126/195 (64%), Gaps = 2/195 (1%)
Query: 12 VAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFR 70
VAM GK+CVAIA D R GI Q A ++ K+ ++ +++GL GL D T+ QK+RF+
Sbjct: 10 VAMVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFK 69
Query: 71 QNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCV 130
++YEL+ENR MSPKV +++S LYE+RF PY+ EP+V GLD + +P I +MDLIG
Sbjct: 70 HDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDKD-GKPYITSMDLIGAD 128
Query: 131 NQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYII 190
DFVV G + L+G+CE+ + +LEPD+LF I L R+ +SGWG +V +I
Sbjct: 129 ASADDFVVAGDNVESLFGVCESFYRKDLEPDELFNVIGNCLNAGVNRDCLSGWGGIVTLI 188
Query: 191 EQDKVTVRHVKTRMD 205
+D R +K RMD
Sbjct: 189 TKDGPITRTLKNRMD 203
>gi|19073955|ref|NP_584561.1| 26S PROTEASOME BETA SUBUNIT, theta chain [Encephalitozoon cuniculi
GB-M1]
gi|19068597|emb|CAD25065.1| 26S PROTEASOME BETA SUBUNIT, theta chain [Encephalitozoon cuniculi
GB-M1]
gi|449329321|gb|AGE95594.1| 26S proteasome beta subunit, theta chain [Encephalitozoon cuniculi]
Length = 205
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 126/201 (62%), Gaps = 1/201 (0%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T+ GGSI+AM VAI CDKR G+ ++ +F +I ++G +YVGLP DTQ +
Sbjct: 6 TFYGGSILAMASSKGVAIMCDKRLGMSSITVSKDFTRIHRIGPRLYVGLPAFVPDTQVLL 65
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+KIR NL+ L+ R+M P+ L +MIS +LY +R PY P+V GL + +P I M
Sbjct: 66 RKIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTSD-GKPYISGM 124
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D IG + P DFV G L G+CE L+ P+++ ++LF T QA +NA +R+A+SGWG
Sbjct: 125 DCIGSIASPGDFVAVGTADKNLMGICEALYRPDMDEENLFVTCVQAFLNAIDRDALSGWG 184
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
A Y+I ++KVT R +K R D
Sbjct: 185 ADCYVIGKNKVTKRSIKGRCD 205
>gi|124505797|ref|XP_001351012.1| beta3 proteasome subunit, putative [Plasmodium falciparum 3D7]
gi|23510655|emb|CAD49040.1| beta3 proteasome subunit, putative [Plasmodium falciparum 3D7]
Length = 204
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 135/204 (66%), Gaps = 12/204 (5%)
Query: 14 MTGKNCVAIACDKRFGIQG-TALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQN 72
M+G NCVAIACD R G T ++ F KIF++ +++YVGL GLATD QT+Y+ +R+R N
Sbjct: 1 MSGSNCVAIACDLRLGANTFTTVSTKFSKIFKMNNNVYVGLSGLATDIQTLYEILRYRVN 60
Query: 73 LYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVG------LDPE-----TAEPII 121
LYE++++ +M + M+S++LY RF PYFV P+VVG +D E EP +
Sbjct: 61 LYEVRQDAEMDVECFANMLSSILYSNRFSPYFVNPIVVGFKLKHYVDEEGEKKVNYEPYL 120
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
DLIG + DFVV G S+QL+GMCE+L+ + + + LFETI+Q L++A +R+ +S
Sbjct: 121 TAYDLIGAKCETRDFVVNGVTSEQLFGMCESLYVKDQDENGLFETISQCLLSALDRDCIS 180
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA V ++ +K+ + +K RMD
Sbjct: 181 GWGAEVLVLTPEKIIKKKLKARMD 204
>gi|225459611|ref|XP_002285872.1| PREDICTED: proteasome subunit beta type-3-A isoform 2 [Vitis
vinifera]
Length = 174
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 127/205 (61%), Gaps = 31/205 (15%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG +++AM GKNC AIA D+RFG+Q +A +FQKI+++ +++GL GLATD
Sbjct: 1 MSIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+R
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR--------------------- 99
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
DFVV G S+ LYG CE +++P++EP++LFE I+QAL+++ +R+ +
Sbjct: 100 ----------ELAKDFVVAGTASESLYGACEAMFKPDMEPEELFEIISQALLSSVDRDCL 149
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +V R +K RMD
Sbjct: 150 SGWGGHVYVVTPTEVKERILKGRMD 174
>gi|402467005|gb|EJW02389.1| hypothetical protein EDEG_03183 [Edhazardia aedis USNM 41457]
Length = 204
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 125/205 (60%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI T+ GGS++A+ +N +A D R G + NF KI ++ S ++VGLP D
Sbjct: 1 MSISTHYGGSVLAVKSRNSIAFLTDLRLGQGNFTTSMNFPKIHKITSKLFVGLPQFIPDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q + +KI NL+ L ENR M P+ L M+S +LY RRF P F P++ G + + EP
Sbjct: 61 QFLLKKIIKNHNLFVLNENRPMEPEELTNMVSYILYSRRFTPLFTSPVIAGFN-KFGEPY 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MD IGC+++P DFVV G L GMCE LW+ +LE +DLF QA NA +R+A+
Sbjct: 120 VSGMDQIGCLDEPEDFVVSGTAERNLAGMCEALWQKDLEGEDLFVMAVQAFANAIDRDAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG ++I+ +KV R V+ R+D
Sbjct: 180 SGWGIEGFLIQNEKVLQRRVRMRLD 204
>gi|399218578|emb|CCF75465.1| unnamed protein product [Babesia microti strain RI]
Length = 192
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 129/193 (66%), Gaps = 2/193 (1%)
Query: 14 MTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQN 72
M G CV+I D R G+ + T + ++F K+F++ + + G GLATD Q++ ++++F+
Sbjct: 1 MCGHECVSIGSDLRLGVNRFTTIGNDFPKVFKINNKCFFGSSGLATDIQSILKELKFKIK 60
Query: 73 LYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQ 132
++EL++ R + + L +++NMLY RRFGP+F+ P+V GLD + P I + DLIG +
Sbjct: 61 IFELEQERDIGIQSLGHVVANMLYSRRFGPWFISPIVAGLDDKN-RPFISSYDLIGAPSD 119
Query: 133 PSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQ 192
DFVV G CSDQL+G+CE+L + D+LFET +Q L+ +R+ +SGWGAVV++I
Sbjct: 120 SDDFVVSGSCSDQLFGICESLHHSGMNEDELFETTSQCLLAGLDRDCLSGWGAVVHVITP 179
Query: 193 DKVTVRHVKTRMD 205
K+ + ++TRMD
Sbjct: 180 KKIITKTIQTRMD 192
>gi|440492147|gb|ELQ74741.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Trachipleistophora hominis]
Length = 205
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I T+ GGS++A+TGK+ I DKR G ++ +++++ +YVG+ D Q
Sbjct: 4 ISTFYGGSVLALTGKHSAIIVSDKRLGNNSITVSTQHDRVYKMSDKVYVGMTLFVPDVQM 63
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+ +K+R NL+E++ENR++ P +++S LY RF P FV+P+V G+D +P I
Sbjct: 64 LVRKLRMEVNLFEIEENRRIDPDEFSSLLSYTLYSHRFSPRFVDPVVAGIDAHD-KPYIC 122
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
+MDL+GC + +DF G D+LYG+ E L+ P++ D+LF T Q +NA +R+A+SG
Sbjct: 123 SMDLLGCQSTSNDFCAVGTAEDKLYGLAEALYVPDMNDDELFVTAMQIFLNAVDRDALSG 182
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
WGA +II +D+V R VK+RMD
Sbjct: 183 WGAEAHIISRDRVVKRTVKSRMD 205
>gi|27450761|gb|AAO14683.1|AF508264_1 beta 3 subunit of 20S proteasome [Pyrocystis lunula]
Length = 214
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 120/180 (66%), Gaps = 2/180 (1%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
+M YNG +IVAM G CV IA D R+G+ Q + QK FQ+ +VG+ GLATD Q
Sbjct: 4 LMDYNGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQ 63
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
T+ Q + FR L+ L+E R M P+ + +IS++LYE+RFGPYF EP+V GLD + P +
Sbjct: 64 TMAQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDKD-HNPFL 122
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
D IG +++ DFVV G S+QL+G+CE+ W P + D+LFET+AQ L++A +R+ ++
Sbjct: 123 CAFDFIGAMSKAQDFVVSGTSSEQLFGVCESFWRPKMNKDELFETLAQCLLSAVDRDCLA 182
>gi|212537589|ref|XP_002148950.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068692|gb|EEA22783.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 171
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 105/152 (69%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VAM GK+CVAIACD R G+Q +++NF KIF Y+G+ GLATD TV
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVTTVSDL 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R++ N+Y L+E R +SP+ L ++S+ LYERRFGPYFV P++ G++ T +P I D
Sbjct: 68 FRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGFDS 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNL 158
IGC++ DF+V G SDQL+G CE LWEP+L
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDL 159
>gi|387593397|gb|EIJ88421.1| hypothetical protein NEQG_01111 [Nematocida parisii ERTm3]
gi|387597054|gb|EIJ94674.1| hypothetical protein NEPG_00197 [Nematocida parisii ERTm1]
Length = 204
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 122/205 (59%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI Y GGS +AM GK+ + I DKRFG + L NF +++++ + + L G D
Sbjct: 1 MSIQQYYGGSSLAMVGKDAIVITADKRFGNNASTLHSNFTRLYKMTDRLILSLTGFVPDC 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q +Y+ +R N+++L E R++ PK ++S +LY +RF P+ + P++VG D E P
Sbjct: 61 QILYKTLRKHVNMFKLNEQREIEPKEFACLLSYILYSKRFSPFLISPLIVGFDREN-NPH 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIGC++ DF G S L G+ + L+ LE +DLF T QA +NA +RNA+
Sbjct: 120 VYTMDLIGCMSAHKDFASTGTASTNLTGIADVLFTEGLEEEDLFTTAVQAFLNAIDRNAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG+ V I+ K R VKTR D
Sbjct: 180 SGWGSDVIILTPSKRVHREVKTRQD 204
>gi|378754521|gb|EHY64552.1| hypothetical protein NERG_02362 [Nematocida sp. 1 ERTm2]
Length = 204
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 122/205 (59%), Gaps = 1/205 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI Y GGS +AM GK+ + I DKRFG + L NF +++++ + + L G D
Sbjct: 1 MSIQEYYGGSSLAMVGKDAIVITADKRFGNNASTLHSNFTRLYKITDRIILSLTGFVPDC 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q +Y+ +R +++L + R++ PK +++S +LY +RF P+ + P++ G D E P
Sbjct: 61 QVLYKTLRKHVTMFKLSQQREIEPKEFSSLLSYILYSKRFSPFLISPLIAGFDREN-NPH 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ MDLIGCV+ DF G S L G+ + L+ ++EP+DLF T QA +NA +RNA+
Sbjct: 120 VYTMDLIGCVSGHDDFATTGTASKSLSGIADVLFTEDMEPEDLFTTTMQAFLNAIDRNAL 179
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG+ I+ K R VKTR D
Sbjct: 180 SGWGSDAVILTPSKRIHREVKTRQD 204
>gi|401825340|ref|XP_003886765.1| proteasome beta type-3 subunit [Encephalitozoon hellem ATCC 50504]
gi|392997921|gb|AFM97784.1| proteasome beta type-3 subunit [Encephalitozoon hellem ATCC 50504]
Length = 206
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 127/203 (62%), Gaps = 1/203 (0%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I T+ GGS++AM +N VAI D+R G+ ++ F +I ++G +YVGLP DTQ
Sbjct: 5 IETFYGGSVLAMASENAVAIMSDRRLGMGPITVSKEFTRIHKIGPRLYVGLPVFIPDTQV 64
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+ +KIR NL+ L+E R+M P+ L +MIS +LY +R PY P+V GL + +P +
Sbjct: 65 LLKKIRKNYNLFRLEEQREMEPEELSSMISFLLYSKRTSPYITSPIVAGLTSD-GKPYVS 123
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
+MD IG + P DFV G D L G+CE L+ P ++ ++LF T QA +NA +R+A+SG
Sbjct: 124 SMDSIGSITSPKDFVAAGTAGDNLIGICEALYRPGMDEENLFVTCTQAFLNAVDRDALSG 183
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
WGA YII Q VT R +K R D
Sbjct: 184 WGADCYIISQGNVTKRSIKGRCD 206
>gi|159110825|ref|XP_001705654.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
gi|157433742|gb|EDO77980.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
Length = 207
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 130/206 (63%), Gaps = 3/206 (1%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALA-DNFQKIFQVGSHMYVGLPGLATDT 60
+I YNG +++ + GK+CVA+A DKR G L N ++IF++ +GL GL TD
Sbjct: 3 NIWEYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDV 62
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T Y++IR + NLY L+E+R++ P+ MIS+ LY+ RFGPYF+ P++ G + + +P
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEAD-GKPY 121
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+G MD IGC++ ++F + G SD L G+CET +P++ D++ + Q + +A R+A
Sbjct: 122 LGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAY 181
Query: 181 SGWGAVVYIIEQDKVTVR-HVKTRMD 205
SGWGA V ++ +D T + TRMD
Sbjct: 182 SGWGAHVVVLRRDGTTSDIPISTRMD 207
>gi|160331191|ref|XP_001712303.1| prsB3 [Hemiselmis andersenii]
gi|159765750|gb|ABW97978.1| prsB3 [Hemiselmis andersenii]
Length = 201
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 123/202 (60%), Gaps = 1/202 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M YNGGSI+ M GKNC AIA D RFG+ KIF++ +++G+ GL D T+
Sbjct: 1 MDYNGGSIIIMGGKNCFAIASDLRFGLDNFTKGQKTPKIFKIHEKLFLGMIGLFGDISTI 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
Q + ++ ++Y LK++ ++ P ++SN+LY RF P+ VE ++ GLD E I +
Sbjct: 61 RQILEYKTSIYLLKKSERIQPLGFSNILSNLLYHHRFAPFLVETVLAGLD-EKNRLFIES 119
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D++G + SDF G CS+ L G+C W+P + +DLF+TI+ L+ RN +SGW
Sbjct: 120 KDILGAKSATSDFATIGSCSESLNGICGVFWKPEMNREDLFKTISSCLILGLNRNCISGW 179
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
G +V+++ D VT + ++TRMD
Sbjct: 180 GGIVHLVSIDGVTSKLIQTRMD 201
>gi|308160496|gb|EFO62983.1| Proteasome subunit beta type 3 [Giardia lamblia P15]
Length = 207
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 130/206 (63%), Gaps = 3/206 (1%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALA-DNFQKIFQVGSHMYVGLPGLATDT 60
+I YNG +++ + GK+CVA+A DKR G L ++IF++ +GL GL TD
Sbjct: 3 NIWEYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQTDV 62
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T Y++IR + NLY L+E+R++ P+ MIS+ LY+ RFGPYF+ P++ G + + +P
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEAD-GKPY 121
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+G MD IGC++ ++F + G SD L G+CET +P++ D++ + Q + +A R+A
Sbjct: 122 LGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAY 181
Query: 181 SGWGAVVYIIEQD-KVTVRHVKTRMD 205
SGWGA V I+ +D ++ + TRMD
Sbjct: 182 SGWGAHVVILRRDGTISDTPISTRMD 207
>gi|17380218|sp|Q9N9W8.1|PSB3_GIALA RecName: Full=Proteasome subunit beta type-3
gi|9367751|emb|CAB97490.1| 20S proteasome subunit [Giardia intestinalis]
Length = 207
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 129/206 (62%), Gaps = 3/206 (1%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALA-DNFQKIFQVGSHMYVGLPGLATDT 60
+I YNG +++ + G +CVA+A DKR G L N ++IF++ +GL GL TD
Sbjct: 3 NIWEYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDV 62
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T Y++IR + NLY L+E+R++ P+ MIS+ LY+ RFGPYF+ P++ G + + +P
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEAD-GKPY 121
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+G MD IGC++ ++F + G SD L G+CET +P++ D++ + Q + +A R+A
Sbjct: 122 LGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAY 181
Query: 181 SGWGAVVYIIEQDKVTVR-HVKTRMD 205
SGWGA V ++ +D T + TRMD
Sbjct: 182 SGWGAHVVVLRRDGTTSDIPISTRMD 207
>gi|396080880|gb|AFN82500.1| 20S proteasome subunit [Encephalitozoon romaleae SJ-2008]
Length = 206
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 127/203 (62%), Gaps = 1/203 (0%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I T+ GGSI+AM +N VAI DKR G+ ++ +F +I ++G +YVGL DTQ
Sbjct: 5 IETFYGGSILAMASENAVAIMSDKRLGMGPITVSKDFVRIHRMGPRLYVGLSTFVPDTQV 64
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+ ++IR NL++L+E R+M P+ L MIS +LY +R PY P+V GL + P I
Sbjct: 65 LLRRIRKNYNLFKLEEQREMEPEELSNMISFLLYSKRTSPYITAPIVAGLSSD-GRPYIS 123
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
MD IG + P DFV G + L G+CE L+ PN++ ++LF T AQA +NA +R+A+SG
Sbjct: 124 GMDCIGSITSPKDFVATGTAAKNLMGICEALYRPNMDEENLFVTCAQAFLNAVDRDALSG 183
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
WGA Y+I + KV R +K R D
Sbjct: 184 WGADCYVISEGKVIKRSIKGRCD 206
>gi|303388305|ref|XP_003072387.1| 20S proteasome subunit [Encephalitozoon intestinalis ATCC 50506]
gi|303301527|gb|ADM11027.1| 20S proteasome subunit [Encephalitozoon intestinalis ATCC 50506]
Length = 206
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 127/203 (62%), Gaps = 1/203 (0%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I T+ GGSI+A+ VAI DKR G+ ++ +F +I ++G +YVGLP DTQ
Sbjct: 5 IETFYGGSILAIASDEAVAIMNDKRLGMSSITVSKDFTRIHKIGPRLYVGLPVFVPDTQV 64
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+ + IR NL++L+E R+M P+ L +MIS +LY +R PY P+V GL + +P I
Sbjct: 65 LLRSIRKNYNLFKLEEQREMEPEELTSMISFLLYSKREAPYITSPIVAGLRSD-GKPYIS 123
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
MD IG + P DFV G + L G+CE L+ P ++ ++LF T QA +N+ +R+A+SG
Sbjct: 124 GMDSIGSITSPRDFVAAGTSEENLMGICEALYRPGMDEENLFVTCTQAFLNSIDRDALSG 183
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
WGA YII ++KVT R +K R D
Sbjct: 184 WGADCYIISRNKVTKRPIKGRCD 206
>gi|299116535|emb|CBN74723.1| proteasome beta subunit [Ectocarpus siliculosus]
Length = 220
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 124/203 (61%), Gaps = 2/203 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ NGGS +AM GK CVA+A D+RFG++G ++ +++ +V + G GL TD TV
Sbjct: 19 LELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKVNGQLLCGFTGLWTDVLTV 78
Query: 64 YQKIRFRQNLYELKE-NRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
Q + L L E +R ++P L ++S +LY RR P+FVEP+V GLDP P +
Sbjct: 79 MQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPR-GRPYLC 137
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
D++G + DFVV G + LYG CE + P +E ++LF ++ L++A ER+ +SG
Sbjct: 138 GQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRPGMEREELFRVASRCLLSALERDCLSG 197
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
+GAVV++I ++ + R + TRMD
Sbjct: 198 YGAVVHLITEEGIETRELTTRMD 220
>gi|339243107|ref|XP_003377479.1| proteasome subunit beta type-3 [Trichinella spiralis]
gi|316973717|gb|EFV57276.1| proteasome subunit beta type-3 [Trichinella spiralis]
Length = 139
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 102/137 (74%)
Query: 69 FRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIG 128
+R ++Y L+ENR ++P+V M+SN+LYE RF PYF EP+V G+D +T+EP + NMDLIG
Sbjct: 3 YRTSIYNLRENRDVTPEVFSQMLSNLLYENRFSPYFCEPVVAGIDWKTSEPYVANMDLIG 62
Query: 129 CVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVY 188
C+ +P+DFV+ G Q+YGMCE++WE N++ D FE AQAL+ ER+A SGWGAVVY
Sbjct: 63 CICKPNDFVLSGTGDLQMYGMCESVWEKNMDRDAAFEATAQALLACIERDAASGWGAVVY 122
Query: 189 IIEQDKVTVRHVKTRMD 205
I D++ V+ +K R+D
Sbjct: 123 TISNDEIDVKSIKARLD 139
>gi|429964899|gb|ELA46897.1| hypothetical protein VCUG_01595 [Vavraia culicis 'floridensis']
Length = 205
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 125/203 (61%), Gaps = 1/203 (0%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I + GGS++A+TGK+ I DKR G ++ +++++ +YVG+ D Q
Sbjct: 4 ISKFYGGSVLALTGKDSAIIVSDKRLGNNSITVSMQHDRVYKMSDRVYVGMALFVPDIQM 63
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+ +K+ NL+E+ ENR++ P +++S+ LY RF P +V+P+V G+D + P I
Sbjct: 64 LVRKLSKEVNLFEIGENRRIEPDEFCSLLSSTLYSNRFSPSYVDPIVAGIDVQN-RPYIC 122
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
+MDL+GC + +DF G D+LYG+ E L+ PN+ D+LF Q +NA +R+A+SG
Sbjct: 123 SMDLLGCQSTTNDFCAVGTAEDKLYGLAEALYTPNMNDDELFVAAMQIFLNAIDRDALSG 182
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
WGA +II +++V R VK+RMD
Sbjct: 183 WGAEAHIISRNRVIKRTVKSRMD 205
>gi|396478743|ref|XP_003840606.1| hypothetical protein LEMA_P102580.1 [Leptosphaeria maculans JN3]
gi|312217178|emb|CBX97127.1| hypothetical protein LEMA_P102580.1 [Leptosphaeria maculans JN3]
Length = 133
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 101/133 (75%)
Query: 73 LYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQ 132
+Y L+E R +SP+ + ++S+ LYE+RFGPYF+ P++ G++ + +P I D IGC++
Sbjct: 1 MYRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFICGFDSIGCIDF 60
Query: 133 PSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQ 192
DF+V G SDQL+G CE LWEP+L P+DLFETI+QAL+NA +R+A+SGWGA VYIIE+
Sbjct: 61 AKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEK 120
Query: 193 DKVTVRHVKTRMD 205
DKVT R +K R D
Sbjct: 121 DKVTKRLLKGRQD 133
>gi|253744760|gb|EET00912.1| Proteasome subunit beta type 3 [Giardia intestinalis ATCC 50581]
Length = 207
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 129/206 (62%), Gaps = 3/206 (1%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALA-DNFQKIFQVGSHMYVGLPGLATDT 60
+I YNG +++ + GK+CVA+A DKR G L ++IF++ +GL GL TD
Sbjct: 3 NIWEYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQTDV 62
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T Y++IR + NLY L+E+R++ P+ MIS+ LY+ RFGPYF+ P++ G + + +P
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEAD-GKPY 121
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+G MD IGC++ ++F + G SD L G+CE +P++ +++ + Q + +A R+A
Sbjct: 122 LGAMDTIGCLDDCTNFQIAGTASDFLLGLCEAHIKPDMSEEEILPLMEQIIRSATNRDAY 181
Query: 181 SGWGAVVYIIEQD-KVTVRHVKTRMD 205
SGWGA V ++ +D ++ + TRMD
Sbjct: 182 SGWGAHVVVLRRDGTISDTPISTRMD 207
>gi|341885035|gb|EGT40970.1| hypothetical protein CAEBREN_25310 [Caenorhabditis brenneri]
Length = 223
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+Y GG+IVAM G CV IA D R G Q T +A + +K+ +V +YVGL G +D
Sbjct: 1 MSIMSYTGGTIVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
+TV +KI FR+NLYEL+ENR++ P+VL MISN+ Y+ RFG YF EP+V GLD +T +P
Sbjct: 61 RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLD-DTNKPY 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCE 151
I MD IGCV+ P DFV G + L G+CE
Sbjct: 120 ICCMDTIGCVSAPRDFVAVGTGQEYLLGVCE 150
>gi|330039045|ref|XP_003239771.1| 26S proteasome SU [Cryptomonas paramecium]
gi|327206696|gb|AEA38873.1| 26S proteasome SU [Cryptomonas paramecium]
Length = 201
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 123/202 (60%), Gaps = 1/202 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M Y GG +VAM GK C+A+ACD RFG + +IF++ + +G+ GL D +V
Sbjct: 1 MNYTGGCVVAMGGKKCIALACDLRFGNEYFTCGCATPRIFKINKKVIIGMTGLFGDISSV 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
Q + ++ +L+ ++N + + ++SN+LY++RF P F+E +V GLD E EP I +
Sbjct: 61 KQDLEYKMSLHSFEKNLSVQFFNICNILSNLLYQKRFCPLFLENIVCGLDEE-FEPTITS 119
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
MD++G S+F + G C+ LYG+CE W+P L+ +LFE I L+ A RN +SGW
Sbjct: 120 MDILGSSVFSSNFAIVGTCNQNLYGLCEMFWKPGLDFTELFEIIVHCLITASNRNCLSGW 179
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
G +V I+ + + + +KT++D
Sbjct: 180 GCMVKIMSPNGIVTKIIKTKVD 201
>gi|167393450|ref|XP_001740580.1| proteasome subunit beta type-3 [Entamoeba dispar SAW760]
gi|165895272|gb|EDR23004.1| proteasome subunit beta type-3, putative [Entamoeba dispar SAW760]
Length = 205
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 128/205 (62%), Gaps = 6/205 (2%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I Y+GG++V M GK CVAIA D R+G++ + NF K+FQV + G GL +D QT
Sbjct: 5 ITYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQT 64
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+ +K+++ NLY L+E + P+ LL ++MLY++RF PY++ P++ G+D + +
Sbjct: 65 MAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGID-DNGNSYVC 123
Query: 123 NMDLIGCVNQPSDFVVG--GPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ D IG P VG G S++L GMC++ ++ +EP++L E + Q L+ A R+A
Sbjct: 124 SYDYIG---SPEISRVGCVGTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAF 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +D +T+ ++K R D
Sbjct: 181 SGWGVEVYLLTRDNLTIYNMKPRQD 205
>gi|67481017|ref|XP_655858.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56473029|gb|EAL50477.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407034951|gb|EKE37462.1| proteasome subunit beta type 3, putative [Entamoeba nuttalli P19]
gi|449704564|gb|EMD44784.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 205
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 128/205 (62%), Gaps = 6/205 (2%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I Y+GG++V M GK CVAIA D R+G++ + NF K+FQV + G GL +D QT
Sbjct: 5 ISYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQT 64
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+ +K+++ NLY L+E + P+ LL ++MLY++RF PY++ P++ G+D + +
Sbjct: 65 MAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGID-DNGNSYVC 123
Query: 123 NMDLIGCVNQPSDFVVG--GPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ D IG P VG G S++L GMC++ ++ +EP++L E + Q L+ A R+A
Sbjct: 124 SYDYIG---SPEISQVGCVGTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAF 180
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SGWG VY++ +D +T+ ++K R D
Sbjct: 181 SGWGVEVYLLTRDNLTIYNMKPRQD 205
>gi|238585089|ref|XP_002390764.1| hypothetical protein MPER_09910 [Moniliophthora perniciosa FA553]
gi|215454558|gb|EEB91694.1| hypothetical protein MPER_09910 [Moniliophthora perniciosa FA553]
Length = 145
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 101/142 (71%), Gaps = 3/142 (2%)
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA---EPIIGN 123
R+R N+Y +KE R++ P+ ++S+ LYERRFGP+F+EP++ G+ + +P I
Sbjct: 4 FRYRVNMYTIKEEREIEPETFAHLVSSTLYERRFGPFFIEPVMAGMSKTPSGGLKPFIAA 63
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
DLIGC+N DFVV G S +LYG+ E LWEP+LEP+DLFETI+Q ++NA +R+A SGW
Sbjct: 64 TDLIGCLNFAKDFVVAGTASSKLYGVAEGLWEPDLEPEDLFETISQTMLNAVDRDAYSGW 123
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
G V++I +DKV R +K RMD
Sbjct: 124 GVQVHVITKDKVISRTLKGRMD 145
>gi|390346295|ref|XP_003726518.1| PREDICTED: proteasome subunit beta type-3-like [Strongylocentrotus
purpuratus]
Length = 123
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 88/107 (82%)
Query: 99 RFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNL 158
+FGPYF+EP++ GLDP+T +P I N+DLIGC DFVV G C++QLYGMCE++W P+L
Sbjct: 17 KFGPYFIEPVIAGLDPKTYKPFICNLDLIGCPMFTDDFVVAGTCTEQLYGMCESVWVPDL 76
Query: 159 EPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
PDDLFET++Q L+NA +R+A++GWG VV+IIE+DKVT R VK RMD
Sbjct: 77 APDDLFETLSQGLLNAVDRDALAGWGVVVHIIEKDKVTTREVKARMD 123
>gi|195037993|ref|XP_001990445.1| GH19348 [Drosophila grimshawi]
gi|193894641|gb|EDV93507.1| GH19348 [Drosophila grimshawi]
Length = 200
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 122/198 (61%), Gaps = 6/198 (3%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
Y GSI+AM GK+CVAIA ++G + D+ + ++++G+ +Y+GL G D Y+
Sbjct: 7 YCNGSIIAMHGKDCVAIA------VKGGNINDSNKNLYKLGARLYLGLTGRLADILMAYK 60
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ R+N++EL++NR++ PK L ++S +LY R P+ +E ++VG+DP+T EP I ++
Sbjct: 61 HLILRKNIFELEKNRELLPKELTLILSQLLYAHRLVPFQIEAVIVGMDPDTLEPHICSLG 120
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+IG N DFVV G L G+C++LW P+L P L++TI Q ++ C G G
Sbjct: 121 MIGYPNVTKDFVVAGHRHGPLLGLCKSLWRPSLNPSQLYDTIGQTMIQFCTSYISVGCGV 180
Query: 186 VVYIIEQDKVTVRHVKTR 203
+ +IE+ K+T R + +
Sbjct: 181 DICLIEKYKITERSLSIK 198
>gi|429962770|gb|ELA42314.1| hypothetical protein VICG_00714 [Vittaforma corneae ATCC 50505]
Length = 205
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 116/201 (57%), Gaps = 1/201 (0%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
++ GGSI+AM G CV+I D R G + +F+++F++ + +GLP D Q +
Sbjct: 6 SFYGGSILAMAGDGCVSIVSDYRLGNGPITTSKSFRRVFKITDRIVLGLPFFIPDAQYLL 65
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+KI +L++L E R + PK + S +LY R P + ++ G+D E +P + +M
Sbjct: 66 KKIEKHVSLFKLMEGRDIEPKECANLASAILYSHRRSPLYTTSVIAGIDSEN-KPYVCDM 124
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D +GC +P +FV G S L G+CE L+ +++ +DLF T QA +NA +RNA+SGWG
Sbjct: 125 DSLGCKTEPGNFVAEGTASTNLIGLCEALYREDMDEEDLFTTSIQAFLNAVDRNALSGWG 184
Query: 185 AVVYIIEQDKVTVRHVKTRMD 205
A I+ K VR VK R D
Sbjct: 185 AECIILSPGKCVVRSVKGRCD 205
>gi|240281173|gb|EER44676.1| proteasome component PUP3 [Ajellomyces capsulatus H143]
Length = 140
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 95/139 (68%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
M GK+CVAIACD R G+Q ++++F KIF Y+GL GLATD +V +R++ N+
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNSFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNM 60
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
Y L+E R++SP+ L +IS+ LYE+RFGPYFV P++ G++ T +P I D IGC++
Sbjct: 61 YRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIGCIDFA 120
Query: 134 SDFVVGGPCSDQLYGMCET 152
DF+V G SDQL+G C T
Sbjct: 121 KDFIVSGTASDQLFGTCLT 139
>gi|440290998|gb|ELP84297.1| proteasome subunit beta type-3, putative [Entamoeba invadens IP1]
Length = 265
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 117/186 (62%), Gaps = 8/186 (4%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SI Y+GG + M GKNCVA+A D R+G++ + NF K+FQ+ H VG G+ D Q
Sbjct: 4 SIDNYSGGIAIGMCGKNCVALAADNRYGLRYQFASSNFHKVFQLNEHCLVGGCGVYADVQ 63
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
TV+++I++ NLY+L+E R + P L+ +++L+ +RF PY++ P+++G D + +
Sbjct: 64 TVFEQIKYDANLYKLREGRPIGPSQLVNATAHLLFSKRFNPYYMSPIIIGFD-DNGKTYC 122
Query: 122 GNMDLIGCVNQPSDF---VVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERN 178
+ D IG P D+ VG C++ + G+C++ ++ ++EP++L ETI Q L+ R+
Sbjct: 123 SSYDYIG---APGDYRFAAVGTGCNEAM-GVCDSFYKEDMEPEELVETIGQCLLAGENRD 178
Query: 179 AVSGWG 184
A SGWG
Sbjct: 179 AFSGWG 184
>gi|410051479|ref|XP_511441.4| PREDICTED: proteasome subunit beta type-3 [Pan troglodytes]
Length = 168
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 109/190 (57%), Gaps = 51/190 (26%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+R DP
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKR-----XXXXXXXXDP------ 109
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
D L+ ETI+QA++NA +R+AV
Sbjct: 110 -----------------------DHLF-----------------ETISQAMLNAVDRDAV 129
Query: 181 SGWGAVVYII 190
SG G +V+I+
Sbjct: 130 SGMGVIVHIM 139
>gi|390463598|ref|XP_003733064.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-3
[Callithrix jacchus]
Length = 116
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 88/111 (79%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVG 111
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+RFGP + ++G
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPTTLSQSLLG 111
>gi|444732722|gb|ELW72997.1| Glutamate decarboxylase 2 [Tupaia chinensis]
Length = 312
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 109/192 (56%), Gaps = 49/192 (25%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+I+AM GK+ VAIA D+RFGIQ + +FQKIF +G L GLA
Sbjct: 1 MSIMSYNGGAIMAMKGKSYVAIAADRRFGIQVQMVTTDFQKIFPMGDR----LNGLA--- 53
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Y+ E ++ GLDP+T +P
Sbjct: 54 ------------------------------------------YYTETVIAGLDPKTFKPF 71
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I +DLIGC DFVV G CS+Q+YGMCE+LWEP ++P+ LFETI+QA++NA + +AV
Sbjct: 72 ICCLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPIMDPEYLFETISQAMLNAVDWDAV 131
Query: 181 SGWGAVVYIIEQ 192
SG G +V+ + Q
Sbjct: 132 SGMGVIVHGLMQ 143
>gi|300707553|ref|XP_002995980.1| hypothetical protein NCER_101004 [Nosema ceranae BRL01]
gi|239605230|gb|EEQ82309.1| hypothetical protein NCER_101004 [Nosema ceranae BRL01]
Length = 205
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 1/203 (0%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I Y GGSI+AM GK+ V+I DKR G ++ NF K++ + + ++ G GL +D +
Sbjct: 4 IAEYYGGSILAMIGKSSVSIVTDKRLGAGPISVGKNFTKVYTLNNRLFFGFTGLVSDAEI 63
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+Y+KIR NL+ R M P L +IS +LY++R PY+V +V G+ + +P
Sbjct: 64 LYKKIRKNYNLFVQDNKRDMEPSELSNLISFILYQKRLQPYYVSTIVCGITSDN-KPYAS 122
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
+MD IG + + +F G S+ L G+ E L+ ++E +DLF T Q +N+ +R+ G
Sbjct: 123 SMDCIGAMKETDEFATVGTASNNLMGLSEALFYADMEDEDLFTTSVQVFLNSSDRDTFGG 182
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
G ++I + R R D
Sbjct: 183 MGFECFLINHEGYKKREFVGRCD 205
>gi|219119376|ref|XP_002180450.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407923|gb|EEC47858.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 227
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 128/227 (56%), Gaps = 29/227 (12%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGGS++AM GK+CVA+A D+RFG G AL + + + S + VG G+ D Q++ Q
Sbjct: 2 NGGSLLAMAGKDCVALAVDRRFG-SGPALVNVGPRSVLAPSSLLLVGFTGMEGDVQSLKQ 60
Query: 66 KI------RFRQNL--YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA 117
++ ++++ + + R +SP+ + ++ S++LY R+ PYFVEP+V+GL+P +
Sbjct: 61 ELAAQVARKYQRGMGISGTENQRFISPRSMTSLTSHVLYNRKRAPYFVEPLVIGLEPCVS 120
Query: 118 E-------------------PIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNL 158
E P + ++D+IG + ++FV G +YG E ++PNL
Sbjct: 121 EKKMSPISSDATVNSTTAYRPYLCSLDMIGATSLSNEFVCAGAAIKSIYGTAEAAYQPNL 180
Query: 159 EPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
D+L E +A ++A ER+ +SG+GAVVY+I D + ++ R D
Sbjct: 181 SGDELVEACGKAFLSALERDCLSGYGAVVYLITSDGIVAYELEGRND 227
>gi|148684144|gb|EDL16091.1| mCG13231, isoform CRA_a [Mus musculus]
Length = 112
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 85/109 (77%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMV 109
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+R ++P +
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRIQNTCLKPFL 109
>gi|149054058|gb|EDM05875.1| rCG33987, isoform CRA_b [Rattus norvegicus]
Length = 112
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 84/109 (77%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS+M+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMV 109
QTV Q+++FR NLYELKE R++ P L++M++N+LYE+R + P +
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRIQSTCLRPFL 109
>gi|324537662|gb|ADY49511.1| Proteasome subunit beta type-3 [Ascaris suum]
Length = 130
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 81/121 (66%)
Query: 85 KVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSD 144
KV MISN+LY+ RFG Y EP+V GLDP T + I MD IGC+ P DFV G ++
Sbjct: 10 KVAATMISNLLYQHRFGGYLTEPLVAGLDPVTNKAYICGMDTIGCIAAPKDFVAVGTGTE 69
Query: 145 QLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRM 204
L G+CE W N+ D+LFE AQ++++A ER+A SGWG ++Y I ++KV ++ +K RM
Sbjct: 70 YLLGVCEGFWHENMNADELFEATAQSMLSAMERDAASGWGVLIYTITKNKVNIKTIKARM 129
Query: 205 D 205
D
Sbjct: 130 D 130
>gi|269859513|ref|XP_002649481.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
gi|220067032|gb|EED44500.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
Length = 206
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 112/204 (54%), Gaps = 3/204 (1%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I TY GGS++ M GKN V I DKR G+ + I Q+ S ++GL G D Q
Sbjct: 5 ISTYYGGSLLGMCGKNSVIIVGDKRLGMGNFTVNTERTSIHQINSKCFIGLSGFLPDCQK 64
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYE-RRFGPYFVEPMVVGLDPETAEPII 121
+ I L+EL ENR + + ++S +LY R GP +++P++VGLD +P
Sbjct: 65 LISIITNHIKLFELNENRIIEIDEVKNLVSYVLYSYRTTGPLYLQPIIVGLD-RNDKPYA 123
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
+MD +GC +V G + L G+CE L+ +++ D LF QA +NA +R+A+S
Sbjct: 124 ISMDCLGC-ETIYHYVSIGTAENNLTGICEALYIKDMDEDQLFTNAMQAFINAVDRDALS 182
Query: 182 GWGAVVYIIEQDKVTVRHVKTRMD 205
GWGA +II KV R VK+R D
Sbjct: 183 GWGAECFIITPSKVIQRKVKSRCD 206
>gi|389612013|dbj|BAM19540.1| proteasome beta3 subunit [Papilio xuthus]
Length = 96
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 76/93 (81%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS + YNGG++VAM G++CVAIA DKRFGIQ ++ NF K++Q+G +YVGLPGLATDT
Sbjct: 1 MSXLAYNGGAVVAMKGQDCVAIATDKRFGIQAQTISTNFPKVYQMGPTLYVGLPGLATDT 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISN 93
QTV+Q+++FR NLYELKENR M PK AM+SN
Sbjct: 61 QTVFQRLKFRMNLYELKENRVMRPKTFSAMLSN 93
>gi|224006550|ref|XP_002292235.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971877|gb|EED90210.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 184
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 111/187 (59%), Gaps = 5/187 (2%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGI--QGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+NGGSI+AM+G+N VAIA D RFG+ Q A + G+ V LP ++T
Sbjct: 1 FNGGSILAMSGRNSVAIAIDARFGLGMQTIATMNTDNDDASDGNPRIVLLPN--SNTLLA 58
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ + + + +E KMSP+ + ++S++LY RR PY+VEP+VVGL+ P +
Sbjct: 59 WTGL-YGDGISFAEEMNKMSPRAITMLVSHLLYRRRSAPYYVEPVVVGLENVRVPPYLVT 117
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
D++G + + FV G S L+G E LW PNLE ++L E +A V+A ER+ +SG+
Sbjct: 118 TDMLGAQSTSTSFVCSGVASRSLHGTAEALWRPNLEGEELVEVCGRAFVSALERDCLSGY 177
Query: 184 GAVVYII 190
GAVVY+I
Sbjct: 178 GAVVYLI 184
>gi|149731672|ref|XP_001503282.1| PREDICTED: proteasome subunit beta type-3-like [Equus caballus]
Length = 168
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Query: 35 LADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNM 94
L + QKIF +G + + L GLAT+ QT Q ++F+ NL EL E ++ P L+++++N+
Sbjct: 2 LTTDLQKIFPMGEWLDISLTGLATNFQTTAQHLKFQLNLCELNEGSQIKPYTLMSVMANL 61
Query: 95 LYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLW 154
LY+++FGP + EP++ LD +T P + ++DLI C DFVV C++Q+ GMCE+L
Sbjct: 62 LYKKQFGPCYTEPVIAWLDLKTFTPFLCSLDLISCPVVTDDFVVSSTCAEQMCGMCESLG 121
Query: 155 EPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ L ET++QA++NA + +A + ++ E+DK T R +K +MD
Sbjct: 122 AHHAH---LLETVSQAMLNAVDGDAARC-KSHFHLAEEDKTTTRILKAQMD 168
>gi|195373979|ref|XP_002046043.1| GM19273 [Drosophila sechellia]
gi|194123230|gb|EDW45273.1| GM19273 [Drosophila sechellia]
Length = 82
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 70/82 (85%)
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
MDLIGC N P DFVV C++QLYGMCETLW+P+LEPD LFE IAQ++VNA +R+A+SGW
Sbjct: 1 MDLIGCPNAPDDFVVARTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGW 60
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
GA VYIIE+DK+T R +KTRMD
Sbjct: 61 GATVYIIEKDKITERTLKTRMD 82
>gi|361126076|gb|EHK98092.1| putative proteasome component PUP3 [Glarea lozoyensis 74030]
Length = 135
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 98/185 (52%), Gaps = 55/185 (29%)
Query: 21 AIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKENR 80
+I CD R G+Q +++NF KIF G +Y+GL GLATD TV R++ N+Y L+E R
Sbjct: 6 SITCDLRLGLQALTVSNNFPKIFSYGD-VYLGLTGLATDVSTVSDLFRYKVNMYRLREER 64
Query: 81 KMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGG 140
+SP + ++S+ LYE+RFGPYF G
Sbjct: 65 NISPSTMANLVSSSLYEKRFGPYF-----------------------------------G 89
Query: 141 PCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHV 200
P +DLFETI+QAL+NA +R+A+SGWGA VY+IE+DKVT R +
Sbjct: 90 P-------------------EDLFETISQALLNAVDRDALSGWGAHVYVIEKDKVTKRLL 130
Query: 201 KTRMD 205
K R D
Sbjct: 131 KGRQD 135
>gi|351723049|ref|NP_001237521.1| uncharacterized protein LOC100527027 [Glycine max]
gi|255631394|gb|ACU16064.1| unknown [Glycine max]
Length = 123
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 82 MSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGP 141
M P+ +++S +LYE+RFGPYF +P++ GL E +P I MD IG DFVV G
Sbjct: 1 MKPETFASLVSALLYEKRFGPYFCQPVIAGLGDED-KPFICTMDCIGAKELAKDFVVSGT 59
Query: 142 CSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVK 201
S+ LYG CE +++P++EP++LFETI+QAL+++ +R+ +SGWG VY++ ++V R +K
Sbjct: 60 ASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPNEVKERILK 119
Query: 202 TRMD 205
RMD
Sbjct: 120 GRMD 123
>gi|390369126|ref|XP_001197881.2| PREDICTED: proteasome subunit beta type-3-like
[Strongylocentrotus purpuratus]
Length = 99
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 76/99 (76%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNG ++VAM GK+CV IA D+RFG+Q ++ N QKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGSAVVAMIGKDCVGIASDRRFGVQAQTVSMNAQKIFTMGPRLYLGLSGLATDI 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERR 99
TV +++FR NLY L+ENR + P+ ++M+SN+LYERR
Sbjct: 61 TTVSNRLKFRLNLYTLRENRDVKPETFMSMVSNLLYERR 99
>gi|294889351|ref|XP_002772769.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239877319|gb|EER04585.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 129
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 85/119 (71%), Gaps = 2/119 (1%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGI-QGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
M YNGGS++AM G+ CV IACD+R+G+ Q ++ N QK++ + S VG GLATD+QT
Sbjct: 1 MEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDSQT 60
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
+ Q ++FR LY+LKE+R+M V+ +++ MLYE+RFGPYF EP++ GL + EP I
Sbjct: 61 LSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKND-GEPFI 118
>gi|413943570|gb|AFW76219.1| hypothetical protein ZEAMMB73_756098 [Zea mays]
Length = 99
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 73/99 (73%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +FQ++F++ +Y+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERR 99
QT+YQ++ FR LY+L+E R M P+ +++S +LYE+R
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
>gi|431839032|gb|ELK00961.1| Proteasome subunit beta type-3 [Pteropus alecto]
Length = 140
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 85/118 (72%)
Query: 88 LAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLY 147
+++++ LYE+ FGPY+ EP++ GLDP++ +P I ++DLIGC +FVV G + Q Y
Sbjct: 1 MSVVAKFLYEKCFGPYYTEPVICGLDPKSFKPFICSLDLIGCPMVTDNFVVRGTYTKQKY 60
Query: 148 GMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
MC+++WE +++P+ LFE I+Q + NA +++ SG G +V+I E+DK+T + +K RMD
Sbjct: 61 MMCKSIWEISMDPEHLFEAISQVMPNAMDQDVESGMGVIVHISEEDKITTKILKARMD 118
>gi|413935899|gb|AFW70450.1| hypothetical protein ZEAMMB73_290009 [Zea mays]
Length = 200
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 72/99 (72%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI YNG ++VAM GKNC AIA D+R G+Q +A +F+++F+V +Y+GL GLATD
Sbjct: 102 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFRRVFKVHDKLYIGLSGLATDA 161
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERR 99
QT+YQ++ FR LY+L E R M P+ +++S +LYE+R
Sbjct: 162 QTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKR 200
>gi|198468365|ref|XP_002134014.1| GA27033 [Drosophila pseudoobscura pseudoobscura]
gi|198146380|gb|EDY72641.1| GA27033 [Drosophila pseudoobscura pseudoobscura]
Length = 198
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SI + GGS+VAM G CVAIA D G ++ +FQV ++YV L G D
Sbjct: 3 SIASILGGSVVAMAGNECVAIATDHIILHDGEKYDYDYGNLFQVHPYIYVALSGCEQDII 62
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
V ++ RQN++ ++P++ +SN L E R PY +E +V GL+ ET EP I
Sbjct: 63 RVRNRMLLRQNMF-----GNVTPEIYAKNLSNYLKEPRLKPYQIESVVAGLNTETVEPFI 117
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS 181
++ G + DF G C + MC+ LW+P+L+P DL I+ +++ +
Sbjct: 118 CGVNGSGELLNSEDFSASGKCP-SIGTMCKALWKPDLKPTDLLAVISDSIMEGSDLKGAD 176
Query: 182 GWGAVVYIIEQ 192
WGA +Y++ +
Sbjct: 177 CWGATIYVLHK 187
>gi|70937358|ref|XP_739497.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56516540|emb|CAH84497.1| hypothetical protein PC301073.00.0 [Plasmodium chabaudi chabaudi]
Length = 128
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 78/127 (61%), Gaps = 12/127 (9%)
Query: 14 MTGKNCVAIACDKRFGIQG-TALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQN 72
M+G CVAIACD R G T ++ NF KIF++ H+YVGL GLATD Q++Y+ +R+R N
Sbjct: 1 MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 73 LYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA-----------EPII 121
LY++++ +M+ M+SN+LY RF PYFV P+VVG T EP +
Sbjct: 61 LYQIRQETEMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVTTQVDENGNKTNVYEPYL 120
Query: 122 GNMDLIG 128
DLIG
Sbjct: 121 NAYDLIG 127
>gi|443896401|dbj|GAC73745.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Pseudozyma antarctica T-34]
Length = 99
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM YNGGS+VA GKNCV IA D R G Q +A NF K+F+V Y+GLPGLA+D
Sbjct: 1 MSIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYIGLPGLASDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERR 99
T+ ++ R+R N+Y++KE R++ P++ ++S+ LYERR
Sbjct: 61 STLRERFRYRVNMYKMKEEREIEPEIFANLVSSTLYERR 99
>gi|344243208|gb|EGV99311.1| Proteasome subunit beta type-3 [Cricetulus griseus]
Length = 95
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 72/95 (75%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
M IM+YNGG+++A+ GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL LAT
Sbjct: 1 MYIMSYNGGAVMALKGKNCVAIAVDRRFGIQAQMVTTDFQKIFPIGDRLYIGLAVLATYV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNML 95
QTV Q+++F NLYELKE R++ P L +M++N+L
Sbjct: 61 QTVAQRLKFLLNLYELKEGRQIKPYTLTSMVANLL 95
>gi|395827082|ref|XP_003786737.1| PREDICTED: proteasome subunit beta type-3 [Otolemur garnettii]
Length = 133
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 100/205 (48%), Gaps = 72/205 (35%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSIM+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
QTV Q K NR + V L + + VG DPE
Sbjct: 61 QTVGQN----------KPNRNILQAVGLKI----------------HLRVGEDPEH---- 90
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ ET+ + A++NA +R+AV
Sbjct: 91 ----------------------------LFETISQ--------------AMLNAVDRDAV 108
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G +V+IIE+DK+T R +K RMD
Sbjct: 109 SGMGVIVHIIEKDKITTRTLKARMD 133
>gi|195165827|ref|XP_002023740.1| GL19755 [Drosophila persimilis]
gi|194105874|gb|EDW27917.1| GL19755 [Drosophila persimilis]
Length = 198
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 8/192 (4%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S+ + GGS+VAM G CVAIA D G ++ +FQV ++YV L G D
Sbjct: 3 SVASILGGSVVAMAGNECVAIATDHIILHDGENYDFDYGNLFQVHPYIYVALSGCEQDII 62
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
V ++ RQN++ ++P++ +SN L E R PY VE +V GL+ +T EP I
Sbjct: 63 RVRNRMLLRQNMF-----GNVTPEIYAKNLSNYLKEPRLKPYQVESVVAGLNTDTVEPFI 117
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYG-MCETLWEPNLEPDDLFETIAQALVNACERNAV 180
++ G + DF G C L G MC+ LW+P+L+P L I+ +++ +
Sbjct: 118 CGVNGSGELLNSEDFSASGKC--PLIGTMCKALWKPDLKPSGLLAVISDSIMGGSDLKGA 175
Query: 181 SGWGAVVYIIEQ 192
WGA +Y++ +
Sbjct: 176 DCWGATIYVLHK 187
>gi|149054059|gb|EDM05876.1| rCG33987, isoform CRA_c [Rattus norvegicus]
Length = 75
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 62/71 (87%)
Query: 135 DFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
DFVV G CS+Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AVSG G +V+IIE+DK
Sbjct: 5 DFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDK 64
Query: 195 VTVRHVKTRMD 205
+T R +K RMD
Sbjct: 65 ITTRTLKARMD 75
>gi|148684146|gb|EDL16093.1| mCG13231, isoform CRA_c [Mus musculus]
Length = 75
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 62/71 (87%)
Query: 135 DFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
DFVV G CS+Q+YGMCE+LWEPN++P+ LFETI+QA++NA +R+AVSG G +V++IE+DK
Sbjct: 5 DFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHVIEKDK 64
Query: 195 VTVRHVKTRMD 205
+T R +K RMD
Sbjct: 65 ITTRTLKARMD 75
>gi|323455458|gb|EGB11326.1| hypothetical protein AURANDRAFT_52492 [Aureococcus anophagefferens]
Length = 229
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 9/200 (4%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTAL-ADNFQKIFQVGSHMYVGLPGLATDTQT 62
++Y+GGS++AM GK VA+ DKR G QG AL D ++ + G + L GL D QT
Sbjct: 21 LSYHGGSVLAMAGKKSVALVLDKRLG-QGNALVGDEACRVLECGPRAVLALRGLQGDVQT 79
Query: 63 VYQKIRFRQNLYELKENRKMS--PKVLLAMISNMLYERRFG----PYFVEPMVVGLDPET 116
+ + + + L L+E + PK + A++S MLY R Y VEP++ GL +
Sbjct: 80 LLEDVDAKLRLRRLEEGPSAASEPKAVSALVSVMLYGGRLSGGAPGYAVEPVICGLGADG 139
Query: 117 AEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACE 176
A P + D +G FVV G + LYG CE +E +LE D L + A+ +
Sbjct: 140 A-PYLCAQDGLGARMVSDTFVVAGTAASSLYGACEATFEADLEGDALLDAALAAMAAGLD 198
Query: 177 RNAVSGWGAVVYIIEQDKVT 196
R+ +SG VV++I +D T
Sbjct: 199 RDCLSGREVVVHVITRDGTT 218
>gi|383127955|gb|AFG44635.1| hypothetical protein CL406Contig2_01, partial [Pinus taeda]
Length = 86
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 61/83 (73%)
Query: 30 IQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKENRKMSPKVLLA 89
+Q +A +FQ+IF++ +YVGL GLATD QT+YQ+ FR LY+L+E R M P+ +
Sbjct: 1 VQLQTIATDFQRIFKIHDKLYVGLSGLATDVQTLYQRFAFRHKLYQLREERNMRPETFAS 60
Query: 90 MISNMLYERRFGPYFVEPMVVGL 112
++S +LYE+RFGPYF +P++ GL
Sbjct: 61 LVSALLYEKRFGPYFCQPVIAGL 83
>gi|357616094|gb|EHJ70006.1| hypothetical protein KGM_20821 [Danaus plexippus]
Length = 437
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 59/69 (85%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S+ TYNGG++VAM G++CVAIA DKR+GIQ ++ NF K++Q+G ++VGLPGLATDTQ
Sbjct: 357 SVETYNGGAVVAMKGQDCVAIATDKRYGIQAQTVSTNFPKVYQMGPTLFVGLPGLATDTQ 416
Query: 62 TVYQKIRFR 70
TV+Q+++FR
Sbjct: 417 TVFQRLKFR 425
>gi|162605862|ref|XP_001713446.1| 26S proteasome SU [Guillardia theta]
gi|13794378|gb|AAK39755.1|AF083031_112 26S proteasome SU [Guillardia theta]
Length = 200
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M GG +VA+ GK+ + IA D G QKIF++ + +G+ GL D
Sbjct: 1 MNSFGGCVVAILGKDSLCIASDSENGSVSYLTEFKTQKIFKLHEDIIIGIVGLLGDIYGF 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ + + ++ KE +KM P +L++IS +LY++RF PY +E +V G E +P +G
Sbjct: 61 KEILEYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGF-TENGKPFLGT 119
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+D IG ++ S++ G + ++ + + LW P ++ +L +++++ RN S
Sbjct: 120 VDCIGAISYISNYACIGNLCENIFPLIQFLWRPGMDLKELIILVSKSMKVGNRRNCYSSK 179
Query: 184 GAVVYI 189
+ V I
Sbjct: 180 NSTVMI 185
>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595716|sp|A8AB58.1|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V +A DKR + +KI ++ +M + GL D Q +
Sbjct: 12 KGTTTVGIRSEKAVVLAADKRATAGNFIVHKRVEKIVKISDYMAMTTAGLVADAQVLADV 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R YEL ++MS K +SN+L+ RF PY V+ +V G D P + ++D
Sbjct: 72 LRMEVKNYELFHKKRMSVKAAATFLSNVLHSARFYPYIVQLLVGGFDT---APRLYSLDW 128
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + +F+V G S G+ E + PN++ ++L +A+ A R+ SG G
Sbjct: 129 FGTVAE-EEFLVTGSGSPMAVGVIEAEYNPNMDLEELVNLAVRAVFAATRRDTASGEGID 187
Query: 187 VYIIEQDKVTVRHVK 201
V +I+++ +T+RH +
Sbjct: 188 VAVIDRNGITMRHYR 202
>gi|443896400|dbj|GAC73744.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3 [Pseudozyma
antarctica T-34]
Length = 91
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 2/82 (2%)
Query: 109 VVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIA 168
+V + P+ EP I D+IGC+N DFVV G SD+L+GM E LWEP+L P++LFET++
Sbjct: 12 IVHVSPD--EPFIAATDVIGCLNFAKDFVVSGTASDKLFGMAEGLWEPDLGPEELFETVS 69
Query: 169 QALVNACERNAVSGWGAVVYII 190
Q L+ A ER+A+SGWGAVV I+
Sbjct: 70 QILLGALERDALSGWGAVVRIM 91
>gi|444720794|gb|ELW61563.1| Proteasome subunit beta type-3 [Tupaia chinensis]
Length = 86
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 58/79 (73%), Gaps = 5/79 (6%)
Query: 132 QPSDFV-----VGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
P+ F V G CS+Q+YGMCE+LWE N++P+ LFETI+QA++NA +R+AV G G +
Sbjct: 8 HPASFTLIILSVSGTCSEQMYGMCESLWEANMDPEHLFETISQAMLNAVDRDAVPGIGVI 67
Query: 187 VYIIEQDKVTVRHVKTRMD 205
V++ E+DK+T R K RMD
Sbjct: 68 VHVTEKDKITTRTPKARMD 86
>gi|358338430|dbj|GAA56814.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 873
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 55/72 (76%)
Query: 119 PIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERN 178
P I + D IGC+++P DFVV G ++QLYGMCETLW+ + P +LFE I+Q ++NA +R+
Sbjct: 160 PYIASTDNIGCISEPEDFVVAGTSTEQLYGMCETLWQKKMNPAELFECISQCILNAVDRD 219
Query: 179 AVSGWGAVVYII 190
++GWGA VY+I
Sbjct: 220 CLAGWGARVYLI 231
>gi|11498092|ref|NP_069317.1| proteasome subunit beta [Archaeoglobus fulgidus DSM 4304]
gi|17380266|sp|Q9P996.1|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
Length = 213
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
Y G + V + K+ V +A +KR + + +KI+Q+ M + G D Q + +
Sbjct: 9 YKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLAR 68
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I+ NLYE++ RK + + + + SN+L R+ PY V+ ++ G+D E I ++D
Sbjct: 69 IIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS--IYSID 126
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
IG + D V G S YG+ E + P + D+ E +A+ +A +R++ SG G
Sbjct: 127 PIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGI 186
Query: 186 VVYIIEQDK 194
V I +D+
Sbjct: 187 DVVKITEDE 195
>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
veneficus SNP6]
gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
veneficus SNP6]
Length = 214
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 2/194 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
M M + G + V + K+ + +A +KR I + +KI+QV + + G D
Sbjct: 4 MQDMVFKGTTTVGLICKDGIVLATEKRATIGNYIASRRAKKIYQVADRVAMTTAGSVGDA 63
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q + + ++ +LYE ++ K + K + M+SN+L R+ PYFV+ ++ G+D P
Sbjct: 64 QFLARLVKVEASLYETRKEEKPTVKAIATMLSNLLNSSRYFPYFVQLLIGGVDKRG--PS 121
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ ++D IG + +D V G S YG+ E + P + + E +A+ +A +R++
Sbjct: 122 MFSIDPIGGAIEETDIVATGSGSPTAYGVLEDRYYPEITTQEGVELAIRAITSAMKRDSA 181
Query: 181 SGWGAVVYIIEQDK 194
SG G V I +D+
Sbjct: 182 SGDGIDVVKITKDE 195
>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [methanocaldococcus
infernus ME]
gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
Length = 205
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 103/195 (52%), Gaps = 4/195 (2%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQT 62
M G + + + K+ V +A DKR + G +AD N +KI+++ ++ + + G D Q+
Sbjct: 1 MEMKGTTTIGLICKDAVILAADKRASL-GNLIADKNAKKIYKIDDNLALTIAGSVGDAQS 59
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+ + + LY ++ + MSP ++SN+L+ R+ P+ V+ +V G D + + +
Sbjct: 60 LVRYLTAEAKLYRMRTGKLMSPLACTTLLSNILHSSRYFPFLVQMIVGGFDEKGFK--LY 117
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
++D +G VN+ DF G S YG+ E ++ +++ + +AL A ER+ SG
Sbjct: 118 SLDPLGGVNEEKDFTATGSGSPIAYGVLEAGYKKDMDYKKGVSLVLKALQAAMERDTFSG 177
Query: 183 WGAVVYIIEQDKVTV 197
G + +I +D V +
Sbjct: 178 NGVSLALITKDGVKI 192
>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|302595818|sp|D2RGT4.1|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 215
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 2/188 (1%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
Y G + V + K+ V +A +KR + + +KI+++ + + G D Q + +
Sbjct: 10 YKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYRIADRVAMTTAGAVGDAQFLAR 69
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I LYE+++ K + K + ++SN+L R+ PYFV+ +V G+D P I ++D
Sbjct: 70 LISVEIKLYEIRKEEKPTVKAIATLLSNILNSVRWFPYFVQLLVGGVDKRG--PSIYSID 127
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
L+G + D V G S YG+ E + P + DD E +A+ +A R++ SG G
Sbjct: 128 LLGGAIEEIDIVATGSGSPTAYGVLEDRYTPEITVDDGVELAVRAIYSAMRRDSASGDGI 187
Query: 186 VVYIIEQD 193
V I +D
Sbjct: 188 DVVKITKD 195
>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
gi|74559570|sp|Q8TW10.1|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 210
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 5/190 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + V +A D+R + +KIF++ ++ V G D Q +
Sbjct: 9 KGTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDL 68
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYE--RRFGPYFVEPMVVGLDPETAEPIIGNM 124
+R LYEL+ NR +S + L MIS++L+ + F PY V+ +V G + + +P + N+
Sbjct: 69 MRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFNDD--DPALYNL 126
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + + D+ G S YG+ E +E + DD E +A+ +A ER+ +G G
Sbjct: 127 DPSGSIIE-EDYTATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRAVKSALERDTGTGEG 185
Query: 185 AVVYIIEQDK 194
V I +++
Sbjct: 186 VTVVTITREE 195
>gi|29726328|pdb|1J2Q|H Chain H, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726329|pdb|1J2Q|I Chain I, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726330|pdb|1J2Q|J Chain J, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726331|pdb|1J2Q|K Chain K, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726332|pdb|1J2Q|L Chain L, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726333|pdb|1J2Q|M Chain M, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726334|pdb|1J2Q|N Chain N, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
Length = 202
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 2/185 (1%)
Query: 10 SIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRF 69
+ V + K+ V +A +KR + + +KI+Q+ M + G D Q + + I+
Sbjct: 2 TTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKI 61
Query: 70 RQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGC 129
NLYE++ RK + + + + SN+L R+ PY V+ ++ G+D E I ++D IG
Sbjct: 62 EANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS--IYSIDPIGG 119
Query: 130 VNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYI 189
+ D V G S YG+ E + P + D+ E +A+ +A +R++ SG G V
Sbjct: 120 AIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVK 179
Query: 190 IEQDK 194
I +D+
Sbjct: 180 ITEDE 184
>gi|321473024|gb|EFX83992.1| hypothetical protein DAPPUDRAFT_230628 [Daphnia pulex]
Length = 230
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTV 63
T NGG+IVA+ G++ IA D R IQG ++ Q K+F++ +G+ G D T
Sbjct: 23 TDNGGTIVAVAGEDFAIIASDTRL-IQGYSILSREQTKLFKLSEQTVLGVSGCWCDVLTF 81
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ + R +Y + + MS + ++S MLY +RF PY+V +V GLD + + + +
Sbjct: 82 TRTLEARMKMYLHEHLKPMSTPAVAQLVSTMLYHKRFFPYYVSNIVAGLD-QDGKGTLYS 140
Query: 124 MDLIGCVNQPSDFVVGG-------PCSDQLYGMCETLWE--PNLEPDDLFETIAQALVNA 174
D +G + + + GG P D G+ E PN+ + I + ++A
Sbjct: 141 YDPVGHCEK-NRYRAGGAAGAMLQPLLDNQVGLKNMKGELLPNITKEKALMVIKDSFISA 199
Query: 175 CERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G G ++ II + + V H R D
Sbjct: 200 AERDTSTGDGVIINIITKAGIEVMHFPLRKD 230
>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex protein [Methanoregula boonei 6A8]
gi|302595832|sp|A7I841.1|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 213
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 96/188 (51%), Gaps = 2/188 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + V +A +KR + + +K++Q+ + + + G D Q + +
Sbjct: 10 TGTTTVGLVFAGGVILATEKRATMGYMIASKRAKKVYQIADRIGMTIAGGVGDAQQLARI 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I NLY+++ +R+++ ++SN L + R+ PY+V+ +V G+D P + ++D
Sbjct: 70 ITVECNLYQIRRSREITVGAASTLLSNYLNQNRYFPYYVQLLVGGIDDHG--PSVYSVDA 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + D V G S YG+ E + P + D+ E +AL +A +R+A SG G
Sbjct: 128 MGGATKEEDIVSTGSGSPMAYGVLEDRYRPGMNEDEAVELAVRALRSAMKRDAGSGEGIH 187
Query: 187 VYIIEQDK 194
V +I +D+
Sbjct: 188 VVVITKDR 195
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
Length = 208
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
Y G + + + V +A ++R + + + QKI+++ + + + G D Q + +
Sbjct: 7 YKGTTTIGIICDQGVVLATERRATMGNFIASRDAQKIYRITDNAAMTIAGSVGDGQRLAR 66
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
++ L+EL+ + MS L ++SN+L E R+ PY+V+ ++ GLD A P I ++D
Sbjct: 67 ILQVEAKLFELRRHGSMSINALSMLLSNILAEMRYAPYYVQVLIGGLDK--AGPKIYSLD 124
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G + FV G S YG+ E ++P + ++ E A+AL +A +R++ SG G
Sbjct: 125 PLGGRIEEEKFVSTGSGSPIAYGVLEDRYKPGMSVEEGVELAARALESAMKRDSASGNGM 184
Query: 186 VVYIIEQDKVTV 197
+I +K +
Sbjct: 185 QFCVITAEKFEI 196
>gi|219851431|ref|YP_002465863.1| proteasome beta-type subunit [Methanosphaerula palustris E1-9c]
gi|302595895|sp|B8GG66.1|PSB_METPE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|219545690|gb|ACL16140.1| Proteasome, beta-type subunit, conserved site [Methanosphaerula
palustris E1-9c]
Length = 211
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + + + K+ + +A +KR + + +K++QV + + G D Q +
Sbjct: 6 TLKGTTTIGIVFKDGIILATEKRATMGSMIASKRAKKVYQVADRIGMTTAGGVGDAQQLA 65
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ + NLY+++ R +S ++SN L + R PY+V+ +V G+D P + ++
Sbjct: 66 RIMSVECNLYQIRRGRSISVGASSTLLSNYLNQNRGYPYYVQLLVGGVDA--TGPSVYSV 123
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D +G + SD V G S YG+ E ++ +L D+ E +AL A R++ SG G
Sbjct: 124 DAMGGATRESDIVATGSGSPMAYGVLEDRYKKDLTEDEAIELAIRALRAAMRRDSASGEG 183
Query: 185 AVVYIIEQD 193
V II +D
Sbjct: 184 IHVVIITKD 192
>gi|392332285|ref|XP_001053961.3| PREDICTED: uncharacterized protein LOC363748 [Rattus norvegicus]
gi|392351945|ref|XP_344007.5| PREDICTED: uncharacterized protein LOC363748 [Rattus norvegicus]
Length = 275
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
++DLIGC DFVV G CS+Q+YGMCE+ +++P+ L ETI+QA++NA + +A
Sbjct: 199 SLDLIGCPMMTDDFVVSGTCSEQMYGMCES----SMDPERLCETISQAMLNAVDHDAC-- 252
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
G +V+II++DK+T R +K RMD
Sbjct: 253 MGVIVHIIKKDKITTRTLKARMD 275
>gi|345318445|ref|XP_001517317.2| PREDICTED: proteasome subunit beta type-3-like [Ornithorhynchus
anatinus]
Length = 106
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
M+YNGG+++AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD QT
Sbjct: 1 MSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQT 59
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 134 SDFVVGGPCSDQLY-GMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQ 192
+DF P D+LY G+ + EP+ LFETI+QA++NA +R+AVSG G VV++IE+
Sbjct: 34 TDFQKIFPMGDRLYIGLAGLATDVQTEPEHLFETISQAMLNAVDRDAVSGMGVVVHVIEK 93
Query: 193 DKVTVRHVKTRMD 205
+K+T R +K RMD
Sbjct: 94 NKITTRTLKARMD 106
>gi|289742321|gb|ADD19908.1| 20S proteasome regulatory subunit beta type PSMB1/PRE7 [Glossina
morsitans morsitans]
Length = 236
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G + IA D R T N K+FQ+ S+ +G G DT +
Sbjct: 28 NGGSIVAIAGNDFAVIAADSRLSSGYTIHTRNENKLFQLSSNAVLGSTGCWCDTLALTAL 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +YE ++ MS M+S ++Y RRF PY+V ++ GL+ E + ++ + D
Sbjct: 88 VKARMQMYEHTHSKTMSTDATAQMLSILMYNRRFFPYYVSNVLAGLNSE-GKGVVYSYDP 146
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGMCETLWEPNLEPDDLFETIA-----QALVNA 174
IG + S+ GG P D G+ E P +L + A A ++A
Sbjct: 147 IGHF-EKSNSRAGGSAGALLQPVLDNQIGLKNIKMEHIGFPAELTKERAVAIASDAFISA 205
Query: 175 CERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + II + + V+ ++ R D
Sbjct: 206 TERDIYTGDSVQINIITKSGIEVKELQLRKD 236
>gi|405957660|gb|EKC23857.1| Proteasome subunit beta type-1 [Crassostrea gigas]
Length = 229
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 9/207 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ +A+ G++ V + D R + + K +++ + +G G D T+ +
Sbjct: 24 NGGTCLAIAGEDFVVVGSDTRLSQGFSIFTRDLPKTYKLTTSTVLGACGFHGDVLTLTKV 83
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R ++E + ++KM+ + AM+S MLY RRF PY+V ++ GLD E + ++ + D
Sbjct: 84 LNARLKMFEHEHHKKMTTSEIAAMLSTMLYHRRFFPYYVYNLIAGLDEE-GKGVVYSFDP 142
Query: 127 IGCVNQPSDFVVGG------PCSDQLYGMC--ETLWEPNLEPDDLFETIAQALVNACERN 178
+G G P D G+ + + +L + + + ++A ER+
Sbjct: 143 VGSYGSDGYRARGSAAAMLQPLLDNQIGLKNQQNVQRVSLSKEKVVNLVKDVFISAAERD 202
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G VV++I +D T R D
Sbjct: 203 IYTGDAVVVHVITKDGTTTERFPLRRD 229
>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
gi|302595748|sp|A2SS78.1|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 212
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 2/187 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + V +A ++R + + +K+ + + + + G D Q + + I
Sbjct: 11 GTTTVGIVFDGGVILATERRATMGNLIASKKAKKVHAITDKIGMTIAGGVGDAQQLVRII 70
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
NLYE++ +K+S ++SN L + RF PY+V+ +V G+D T+ P + ++D
Sbjct: 71 NVECNLYEIRRGQKISVGAAATILSNYLNQNRFSPYYVQLLVGGVD--TSGPSVYSVDAA 128
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G +FV G S YG+ E ++PN+ ++ E +AL A R++ SG G V
Sbjct: 129 GGATLEENFVSTGSGSLTAYGVLEDRFKPNMTEEEAIELAVRALRAAMLRDSASGEGYNV 188
Query: 188 YIIEQDK 194
II Q+K
Sbjct: 189 VIITQEK 195
>gi|45360639|ref|NP_988993.1| proteasome beta 1 subunit [Xenopus (Silurana) tropicalis]
gi|38174388|gb|AAH61284.1| proteasome (prosome, macropain) subunit, beta type, 1 [Xenopus
(Silurana) tropicalis]
gi|89272031|emb|CAJ83174.1| proteasome (prosome macropain) subunit beta type 1 [Xenopus
(Silurana) tropicalis]
Length = 239
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T+NGG+++A+ G + +A D R + + N K +++ + +G G D T+
Sbjct: 32 TFNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDNTVIGCTGFHADCLTLT 91
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + +
Sbjct: 92 KIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGAVYSF 150
Query: 125 DLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNAC 175
D +G Q + GG S L Y + + + L + + I ++A
Sbjct: 151 DPVGSY-QRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEQLPLTLEKALKLIKDVFISAA 209
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + I+ +D + V R D
Sbjct: 210 ERDVYTGDALHISIVTKDGIREESVSLRKD 239
>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 203
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + K+ V +A +KR L+ +K+F + + + G+ D QT+ + +
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ YEL+ RK S + ++S +++ RRF P+F E +V G+D E I+ MD +
Sbjct: 68 KLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGIDEEGPHLIV--MDPL 125
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + ++ G + + +T + P++ ++ + QAL A ER+ VSG G +
Sbjct: 126 GSLIE-DNYAALGTGAKLAVAVLDTGYRPDITVEEAKKLAVQALKAAIERDPVSGGGIDL 184
Query: 188 YIIEQDKVTVRHVKTRM 204
I++++ V+ ++
Sbjct: 185 AIVDKNGAREEEVRVQL 201
>gi|148227103|ref|NP_001080435.1| proteasome beta 1 subunit [Xenopus laevis]
gi|27694605|gb|AAH43739.1| Psmb1-prov protein [Xenopus laevis]
gi|114107802|gb|AAI23122.1| Psmb1 protein [Xenopus laevis]
Length = 239
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 11/210 (5%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T+NGG+++A+ G + +A D R + + N K +++ +G G D T+
Sbjct: 32 TFNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDKTVIGCTGFHADCLTLT 91
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + +
Sbjct: 92 KIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGAVYSF 150
Query: 125 DLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNAC 175
D +G Q + GG S L Y + + + L + + I ++A
Sbjct: 151 DPVGSY-QRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEQLPLTLEKALKLIKDVFISAA 209
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + I+ +D V + R D
Sbjct: 210 ERDVYTGDALHISIVTKDGVREESISLRKD 239
>gi|357605013|gb|EHJ64427.1| proteasome subunit beta 1 [Danaus plexippus]
Length = 232
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS+VA+ G + I D R + +K+F++ +G G DT T+ +
Sbjct: 27 NGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSDRTVLGATGCWCDTLTLTRL 86
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +YE + N+ MS + M+S MLY +RF PY++ ++ GLD E + + + D
Sbjct: 87 LQARMQMYEHEHNKAMSTPAVAQMLSTMLYYKRFFPYYISNVLAGLDAE-GKGCVYSYDP 145
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMC---------ETLWEPNLEPDDLFETIAQALVNACER 177
IG + S++ GG QL + + + E L + + ++A ER
Sbjct: 146 IGHCER-SNYRAGGSAGAQLQPLLDNQIGLKNMQNVTEAPLSREKALALLKDVFISAAER 204
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G + II + + + R D
Sbjct: 205 DIYTGDSIYILIITANGIQEEKFELRKD 232
>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595828|sp|A3MXQ6.1|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
Length = 203
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 3/197 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + K V +A +KR L+ +K+F V + + G+ D QT+ + +
Sbjct: 8 GATAVGIKTKEGVVLAAEKRVSYGFYTLSTAGKKVFIVNDRLAIASAGIIADMQTLAKIL 67
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ YEL+ RK S + ++S +++ RRF P+F E +V G+D E I+ MD +
Sbjct: 68 KLNAKAYELEMKRKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGIDDEGPHLIV--MDPL 125
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + ++ G + + + ++P++ D + QAL A ER+ VSG G +
Sbjct: 126 GSLIE-DNYAALGTGAKLAIAIIDASYKPDMSLQDAKKLAVQALKAALERDPVSGGGIDL 184
Query: 188 YIIEQDKVTVRHVKTRM 204
+I+++ VK ++
Sbjct: 185 VVIDKNGAREEEVKLQV 201
>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDT 60
S+ ++G + V KN V +A DKR GT +A +KI ++ + + + GL D
Sbjct: 9 SLKAFHGTTTVGFITKNAVILAADKR-ATAGTLIASRTVKKIVKITDYAAMTIAGLVADA 67
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q + IR LYE RK++ K + +++N+L+ ++ PY V+ +V G D EP
Sbjct: 68 QMLADAIREEARLYETMNKRKLTVKGMATLLANVLFSTKYYPYLVQLIVGGYDT---EPR 124
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ N+D G + + G S G+ E + P+L ++ A+A+ A R++
Sbjct: 125 LYNLDYFGSITEEK-MTSTGSGSPVALGVLEKDYRPDLSLEEAMNLAAKAIKVAIMRDSA 183
Query: 181 SGWGAVVYIIEQ 192
+G G V I
Sbjct: 184 TGDGVDVIAISS 195
>gi|226372486|gb|ACO51868.1| Proteasome subunit beta type-1-A [Rana catesbeiana]
Length = 240
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S T+NGG+++A+ G++ +A D R + + N K +++ +G G D
Sbjct: 29 FSPYTFNGGTVLALAGEDFALVASDTRLSEDYSIHSRNTPKCYKLTDKTVIGCSGFHGDC 88
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 89 LTLTKIIEARLKMYKHSNNKTMTSNAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 147
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L Y + + L + + +
Sbjct: 148 VYSFDPVGSY-QRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEHLPLTLEKALQLVKDVF 206
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + + R D
Sbjct: 207 ISAAERDVYTGDALKISIVTKDGIKEESIPLRKD 240
>gi|195016569|ref|XP_001984439.1| GH16458 [Drosophila grimshawi]
gi|193897921|gb|EDV96787.1| GH16458 [Drosophila grimshawi]
Length = 235
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G++ V IA D R + + + K+F++ H +G G DT ++
Sbjct: 28 NGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKLSPHTVLGSTGCWCDTLSLTGL 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +YE + M+ + M+S ++Y RRF PY+V ++ GLD + + ++ + D
Sbjct: 88 MKVRMQMYEHTHMKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKD-GKGVVYSYDP 146
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGM-CETLWEPNLEP---DDLFETIAQALVNAC 175
IG + + + GG P D G + L L P D + ++A
Sbjct: 147 IGHCERAT-YRAGGTAGSLLQPVLDNQIGYKNQNLAADQLPPLTKDRAVSVASDTFISAA 205
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++ II +D + + ++ R D
Sbjct: 206 ERDIYTGDSVLINIITKDGIEQKTLQLRKD 235
>gi|326915585|ref|XP_003204095.1| PREDICTED: proteasome subunit beta type-1-like [Meleagris
gallopavo]
Length = 237
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTAL-ADNFQKIFQVGSHMYVGLPGLATD 59
S T+NGG+++A+ G++ +A D R +G A+ + + K +++ H +G G D
Sbjct: 26 FSPYTFNGGTVLAIAGEDFCIVASDTRLS-EGYAIHSRDSPKCYKLTEHTVIGCSGFHGD 84
Query: 60 TQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 85 CLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKG 143
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQA 170
+ + D +G + S F GG S L + + + L + + +
Sbjct: 144 AVYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKDV 202
Query: 171 LVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + ++ +D + ++ R D
Sbjct: 203 FISAAERDVYTGDALKICVVTKDGIKEETIQLRKD 237
>gi|257205830|emb|CAX82566.1| 20S proteasome subunit beta 3 [Schistosoma japonicum]
Length = 98
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ +NG +++ M+GK+C AIACD RFG+ ++ +F K++ +G +YVG PGLATD
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERR 99
QTVY R L + N S K+ + + L +
Sbjct: 61 QTVYVFKRHYHCLIDF--NVYSSEKICMNYVKTELLSHK 97
>gi|387017846|gb|AFJ51041.1| Proteasome subunit beta type-1-like [Crotalus adamanteus]
Length = 239
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S T+NGG+I+A+ G++ V +A D R + N K +++ +G G D
Sbjct: 28 FSPYTFNGGTILAIAGEDFVVVASDTRLSEDYAIHSRNSPKCYKLTDTTVIGCSGFHGDC 87
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + + R +Y+ N+ MS + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 88 LTLTKILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 146
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCET---------LWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + + L + + +
Sbjct: 147 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGLKNMQGVKQLPLSLEKALQLVKDVF 205
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + +I +D + R D
Sbjct: 206 ISAAERDVYTGDALKICVITKDGIKEESFPLRRD 239
>gi|332019508|gb|EGI59987.1| Proteasome subunit beta type-1 [Acromyrmex echinatior]
Length = 237
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS+VA+ G + IA D R T N K+F + +G G DT T+ +
Sbjct: 32 NGGSVVALAGDDFCVIAADTRLSTGFTIHTRNQDKLFPLSDTTILGCSGCWCDTTTLTRL 91
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +Y+ + ++MS M+S MLY +RF PY+V ++ GLD E + I + D
Sbjct: 92 LSARMQMYKHEHQKEMSTPATAQMLSIMLYHKRFFPYYVSNILAGLD-ENGKGCIYSYDP 150
Query: 127 IGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACER 177
IG + + + GG L Y E + L + + +A ER
Sbjct: 151 IGHCEKTT-YRAGGSAGALLQPLLDNQIGYKNQEGVTPAPLTQEKAIAILKDVFTSAAER 209
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G G + II +D + + R D
Sbjct: 210 DIYTGDGITIKIITKDGIEISSFALRKD 237
>gi|408404298|ref|YP_006862281.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364894|gb|AFU58624.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 201
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 95/185 (51%), Gaps = 4/185 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G ++V ++ N V +A +KR + N +K F V H+ G+ D Q + +++
Sbjct: 8 GATVVGISYNNGVILAAEKRVSFGNFVVNKNIKKTFSVTDHVGAACAGMVADMQVLVRQV 67
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ +L+ R ++P + ++S +++ERR+ P + +V G++ +P I +D +
Sbjct: 68 EALAKIRKLETRRDVAPNSIAKLMSVIMFERRYFPLLTQVIVGGIN---TKPEIYTLDPL 124
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G V P D+ G ++ G+ + ++PN+ + E +A+ +A +R+A SG G V
Sbjct: 125 GSV-LPDDYAAVGTGAEMALGIMDAEFKPNMTEEKAKELAVRAIRSAIQRDAASGDGIDV 183
Query: 188 YIIEQ 192
++ +
Sbjct: 184 LVVSR 188
>gi|327262119|ref|XP_003215873.1| PREDICTED: proteasome subunit beta type-1-like [Anolis
carolinensis]
Length = 239
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T+NGG+I+A+ G++ +A D R + + K +++ +G G D T+
Sbjct: 32 TFNGGTILAIAGEDFSIVASDTRLSEDYAVHSRDSPKCYKLTDTTVIGCSGFHGDCLTLT 91
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ I R +Y+ N+ MS + AM+S +LY RRF PY+V ++ GLD E + + +
Sbjct: 92 KIIEARLKMYKHSNNKIMSAGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGAVYSF 150
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMC---------ETLWEPNLEPDDLFETIAQALVNAC 175
D +G Q F GG S L + + + + +L + + + ++A
Sbjct: 151 DPVGSY-QRDTFKAGGSASAMLQPLLDNQVGLKNMQNVQQVSLTLEKALQLVKDVFISAA 209
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + II +D + V R D
Sbjct: 210 ERDVYTGDALKICIITKDGIKEETVPLRRD 239
>gi|340374856|ref|XP_003385953.1| PREDICTED: proteasome subunit beta type-1-B-like [Amphimedon
queenslandica]
Length = 223
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S ++NGG+++A++G++ IA D R + +F K +Q+G ++ +G G D
Sbjct: 13 SPYSWNGGTVLAVSGEDFSVIASDTRLSEGFQIYSRDFPKTYQLGDNVVLGSCGFQGDVT 72
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
T+ + I + +Y+ +KMS + L ++S +LY RRF PY+ ++ GLD + + +
Sbjct: 73 TLNKVIEAQLKIYDHIYQKKMSCESLAQLLSTILYTRRFFPYYTYNILAGLDSK-GKGCV 131
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCET---------LWEPNLEPDDLFETIAQALV 172
+ D IG + + GG S L + + + + L + + +
Sbjct: 132 FSFDPIGSYEREV-YRAGGSASSMLQPLLDNQIGLLNQTGVEKKPLSVEKAVQLVTDVFT 190
Query: 173 NACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ +G G + II D V ++ V R D
Sbjct: 191 SAAERDIYTGDGIRINIISADGVDIKEVPLRRD 223
>gi|126465830|ref|YP_001040939.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21.1|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 9 GSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIR 68
G+++ + N V IA +KR G L+ N +K+ + H+ +G GL D Q + + +R
Sbjct: 18 GTVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALR 77
Query: 69 FRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIG 128
YEL+ R++ + L ++S +LY + P E +V G D + P I +D +G
Sbjct: 78 MEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKG--PQIYVLDPVG 135
Query: 129 CVNQPSDFVV--GGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+ + + GGP + G+ E + +++ D+ + A+ A ER+AVSG G
Sbjct: 136 SLIEDKYVALGSGGPIA---LGIIEKEYREDIDVDEAEKLAVSAIREAIERDAVSGDGVD 192
Query: 187 VYIIEQDKVTVRHVKTRMD 205
V I ++ ++R R +
Sbjct: 193 VLRITEEGYSLREYMFRRE 211
>gi|151301141|ref|NP_001093092.1| proteasome beta subunit [Bombyx mori]
gi|95102764|gb|ABF51323.1| proteasome beta subunit [Bombyx mori]
Length = 232
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G + I D R + + +K+F++ +G G DT T+ +
Sbjct: 27 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 86
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +YE + N+ M+ + M+S MLY +RF PY+V ++ GLD + + + + D
Sbjct: 87 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSD-GKGCVYSYDP 145
Query: 127 IG-CVNQPSDFVVGGPCSDQLYGMC---------ETLWEPNLEPDDLFETIAQALVNACE 176
IG C +F GG + QL + + + E L + + ++A E
Sbjct: 146 IGHCARH--NFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 203
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G + II + + R D
Sbjct: 204 RDIYTGDSIYILIITASGIQEEKFELRKD 232
>gi|428182497|gb|EKX51358.1| 20S proteasome subunit beta type 1 [Guillardia theta CCMP2712]
Length = 230
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 9/207 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ +A+ G + IA D R + + L+ N K+ Q+ + + G D T+ +
Sbjct: 25 NGGTCLALAGADFCIIAADSRLSLGYSILSRNTPKVAQLTTKTCIASSGCNADMVTLQKY 84
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++F+ +Y + ++MS + M++ LY RRF PY+ +V GLD + E + + D
Sbjct: 85 LKFKIQMYLHQHGKEMSTPAVAQMLATTLYHRRFFPYYTFNIVGGLD-QNGEGCVFSYDA 143
Query: 127 IGCVNQPSDFVVGG------PCSDQLYGMCETLWEPNLEP--DDLFETIAQALVNACERN 178
IGC + V G P D L T +P +E D+ E + +A ER+
Sbjct: 144 IGCFERLKYTVSGSGHALIEPFLDNLVAYKNTDNKPTIERSCDETLELVKDIFSSAGERD 203
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G +YII+++ + D
Sbjct: 204 IYTGDFVDIYIIDKNGTRYEQFPLKKD 230
>gi|71654519|ref|XP_815877.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
gi|70880966|gb|EAN94026.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
Length = 246
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRF-GIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+I A+ GKN V + D R G D+ K+FQ+ H ++ G+ D + Q
Sbjct: 39 NGGTIAAIAGKNYVILGGDTRLNGDFCIHARDDRTKLFQLTEHTFLASTGMQADRLQLQQ 98
Query: 66 KIRFRQNLYELKENRKM-SPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+++R Y+ K+ S K + + S MLY+RRF PY+ MVVGLD E + +
Sbjct: 99 MLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLD-EKGAGVCYSY 157
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQALVNAC 175
D +G +P + G S + + + L L + E + A A
Sbjct: 158 DPVGST-EPFRYGTSGSASSFVEPLMDCLLTRQHMVQQAPAELSMTETLEMLKNAFTGAA 216
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G +II D + + R D
Sbjct: 217 ERDIFTGDAVCFHIITADGIRSELFELRKD 246
>gi|407420511|gb|EKF38599.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
putative [Trypanosoma cruzi marinkellei]
Length = 246
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRF-GIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+I A+ GKN V + D R G D+ K+FQ+ H ++ G+ D + Q
Sbjct: 39 NGGTIAAIAGKNYVILGGDTRLNGDFCIHTRDDRTKLFQLTEHTFLASTGMQADRLQLQQ 98
Query: 66 KIRFRQNLYELKENRKM-SPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+++R Y+ K+ S K + + S MLY+RRF PY+ MVVGLD E + +
Sbjct: 99 MLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLD-EKGAGVCYSY 157
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQALVNAC 175
D +G +P + G S + + + L L + E + A A
Sbjct: 158 DPVGST-EPFRYGTSGSASSFVEPLMDCLLTRQHMVQQAPAELSMTETLEMLKNAFTGAA 216
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G +II D + + R D
Sbjct: 217 ERDIFTGDAVCFHIITADGIRSELFELRKD 246
>gi|449020004|dbj|BAM83406.1| 20S core proteasome subunit beta 6 [Cyanidioschyzon merolae strain
10D]
Length = 244
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A+ G++ +A D R + + + NF KI Q+ + G+ D Q +++
Sbjct: 34 NGGTVLALAGRDYAIVAADTRLSVGFSIPSRNFTKIVQLTDQAVLASAGMGADRQYLHKI 93
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R R +Y + ++MS + ++SN LY RRF P + ++ G+D T E + D
Sbjct: 94 LRSRLEIYRYQHQKEMSLGAIAQLLSNTLYSRRFFPIYAFNVLGGIDANTGEGFVFGYDA 153
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLE-----------PDD----------LFE 165
IG + V CS G +TL +P L+ PDD E
Sbjct: 154 IGSFEK-----VKVVCS----GSGQTLVQPVLDQQLAGRQKYDVPDDQRMASLSLAEAIE 204
Query: 166 TIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ ++G +Y + V + R D
Sbjct: 205 LTRDVFNSAAERDILTGDALELYAVTASGVRCERFELRRD 244
>gi|71655250|ref|XP_816231.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
gi|70881343|gb|EAN94380.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
Length = 246
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRF-GIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+I A+ GKN V + D R G D+ K+FQ+ H ++ G+ D + Q
Sbjct: 39 NGGTIAAIAGKNYVILGGDTRLNGDFCIHARDDRTKLFQLTEHTFLASTGMQADRLQLQQ 98
Query: 66 KIRFRQNLYELKENRKM-SPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+++R Y+ K+ S K + + S MLY+RRF PY+ MVVGLD E + +
Sbjct: 99 MLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLD-EKGAGVCYSY 157
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQALVNAC 175
D +G +P + G S + + + L L + E + A A
Sbjct: 158 DPVGST-EPFRYGTSGSASSFVEPLMDCLLTRQHMVQQAPAELSMTETLEMLKNAFTGAA 216
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G +II D + + R D
Sbjct: 217 ERDIFTGDAVCFHIITADGIRSELFELRKD 246
>gi|407853394|gb|EKG06411.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
putative [Trypanosoma cruzi]
Length = 246
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRF-GIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+I A+ GKN V + D R G D+ K+FQ+ H ++ G+ D + Q
Sbjct: 39 NGGTIAAIAGKNYVILGGDTRLNGDFCIHTRDDRTKLFQLTEHTFLASTGMQADRLQLQQ 98
Query: 66 KIRFRQNLYELKENRKM-SPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+++R Y+ K+ S K + + S MLY+RRF PY+ MVVGLD E + +
Sbjct: 99 MLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLD-EKGAGVCYSY 157
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQALVNAC 175
D +G +P + G S + + + L L + E + A A
Sbjct: 158 DPVGST-EPFRYGTSGSASSFVEPLMDCLLTRQHMVQQAPAELSMTETLEMLKNAFTGAA 216
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G +II D + + R D
Sbjct: 217 ERDIFTGDAVCFHIITADGIRSELFELRND 246
>gi|91092850|ref|XP_968855.1| PREDICTED: similar to proteasome beta subunit [Tribolium castaneum]
gi|270003046|gb|EEZ99493.1| hypothetical protein TcasGA2_TC000069 [Tribolium castaneum]
Length = 235
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS+VA+ G + V I D R + + K+F++ +G G DT T+ +
Sbjct: 30 NGGSVVAIAGDDFVVIGADTRLSAGFSIYTRDQNKLFRLSDTTVLGCSGCWCDTLTLTRI 89
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +Y+ + N+ M+ M+S MLY +RF PY++ ++VGLD E + I + D
Sbjct: 90 LSARMQMYQQEHNKTMATPACAQMLSTMLYYKRFFPYYISNILVGLDNE-GKGCIYSYDP 148
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGM--CETLWEPNLEPDDLFETIAQALVNACER 177
IG + + + GG P D G+ + + + L + I ++A ER
Sbjct: 149 IGHCEKTT-YRAGGSAGALLQPLLDNQIGLKNMQNVKDSKLTLERAAAIIKDVFISAAER 207
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G ++ II +D + + R D
Sbjct: 208 DIFTGDNILINIITKDGIKEDSFQLRKD 235
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 101/194 (52%), Gaps = 3/194 (1%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTV 63
T G + V + + V +A DKR + G +AD +K++++ ++ + + G D Q +
Sbjct: 3 TMKGTTTVGLICDDAVILATDKRASM-GNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAI 61
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ + LY+++ + +SP+ ++SN+L+ R P+ + ++ G D T P + +
Sbjct: 62 VRALIAEARLYKMRTGKNISPRACATLLSNILHSSRMFPFLTQIIIGGYDL-TDGPKLFS 120
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+D +G +N+ F G S YG+ E ++ ++ ++ + +AL +A ER+ SG
Sbjct: 121 LDPLGGMNEEKTFTSTGSGSPIAYGVLEAEYDRDMSIEEGLKLALKALKSAMERDTYSGN 180
Query: 184 GAVVYIIEQDKVTV 197
G V +I ++ V +
Sbjct: 181 GVSVAVITKEGVKL 194
>gi|302348749|ref|YP_003816387.1| proteasome beta subunit [Acidilobus saccharovorans 345-15]
gi|302329161|gb|ADL19356.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
Length = 207
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MS G+ V + K+ V +A DKR ++ N +K+F + + + + GL D
Sbjct: 1 MSAYEIEQGTAVGVKAKDGVVLATDKRMAYGSFVMSRNAKKVFLINNRAAIAMSGLYADV 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
+ + + YEL E R MS + ++S +LY + P+ +E +V G+D + +P
Sbjct: 61 GAILRYLTAESKYYELTEERTMSLYAISKLLSGILYSYKMLPFIIEALVGGIDRD-GQPK 119
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I +D +G V++ VG + L G E + L D + AL + ER+A
Sbjct: 120 IYTLDSLGSVSEDKYMAVGSGATTAL-GFLEDQYNDALSLDQAEQVAVGALRISMERDAS 178
Query: 181 SGWG 184
+G G
Sbjct: 179 TGDG 182
>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
gi|121724010|sp|Q2FQL8.1|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanospirillum hungatei
JF-1]
Length = 209
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V + + V +A +KR + +KI+Q+ + + G D Q +
Sbjct: 7 TMKGTTTVGIVFETGVVLASEKRATMGYLISNKTAKKIYQIAPRIGLTTAGGVGDAQQLA 66
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ + NLYE++ +++S + ++SN+L+ R P++V+ ++ G+D ET P++ ++
Sbjct: 67 RLMTVEANLYEIRRGKRISVQAASTLLSNILHGNRMFPFYVQLLIGGVD-ETG-PVLFSV 124
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D +G + V G S YG+ E + ++ E +AL +A +R+A SG G
Sbjct: 125 DAVGGTGKEDGIVATGSGSPMAYGVLEDRYTLGMDERSAIELAIRALRSAIKRDAGSGEG 184
Query: 185 AVVYIIEQDK 194
V +I +D
Sbjct: 185 VAVVVITEDS 194
>gi|195328187|ref|XP_002030798.1| GM24382 [Drosophila sechellia]
gi|195590871|ref|XP_002085168.1| GD12455 [Drosophila simulans]
gi|194119741|gb|EDW41784.1| GM24382 [Drosophila sechellia]
gi|194197177|gb|EDX10753.1| GD12455 [Drosophila simulans]
Length = 235
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G + IA D R + K+F++ +G G DT ++
Sbjct: 28 NGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSTGCWADTLSLTGS 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R YE R M+ + + M+S +Y RRF PY+V ++ G+D E + ++ + D
Sbjct: 88 MKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNE-GKGVVYSYDP 146
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGM----CETLWEPNLEPDDLFETIAQALVNAC 175
IG + + + GG P D G E + L D + ++A
Sbjct: 147 IGHCEKAT-YRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKDRAVSVASDTFISAA 205
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++ II +D + VR + R D
Sbjct: 206 ERDIYTGDSVLINIITKDGIEVRTLSLRKD 235
>gi|383853088|ref|XP_003702056.1| PREDICTED: proteasome subunit beta type-1-like [Megachile
rotundata]
Length = 236
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS++A+ G + IA D R + + QK+F + S +G G DT T+ +
Sbjct: 31 NGGSVIALAGDDFCVIAADTRLSVGFSIYTREQQKLFPLSSKTVLGCSGCWCDTLTLTRF 90
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +YE + ++M+ + M+S MLY RRF PY++ ++ GLD + + + D
Sbjct: 91 LSARMQMYEHEHQKEMATPAVAQMLSTMLYYRRFFPYYISNIIGGLD-DKGHGCVYSYDP 149
Query: 127 IGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACER 177
IG + + + GG L Y E + L + I ++A ER
Sbjct: 150 IGHC-EAAKYRAGGSAGALLQPLLDNQIGYKNQEGVEPVPLTQEKAIAVIKDVFISAAER 208
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G + II +D + + R D
Sbjct: 209 DIYTGDSISIKIITKDGIKDESFELRKD 236
>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
igneus Kol 5]
Length = 216
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 96/192 (50%), Gaps = 3/192 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQ 65
G + V + + V +A DKR G +AD +K++++ ++ + + G D Q + +
Sbjct: 9 KGTTTVGLICDDAVVLATDKR-ATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVR 67
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ LY+++ + + P +ISN+L+ R P+ + ++ G D P + ++D
Sbjct: 68 YVSAEAKLYKMRTGKNIPPLSCATLISNILHGNRMFPFLTQLIIGGYDLLYG-PRLFSLD 126
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
IG +N+ S F G S YG+ E + ++ D +AL++A ER+A SG G
Sbjct: 127 PIGGLNEESSFTATGSGSPTAYGILELEYSKDMTLKDGLNLAIKALISAMERDAFSGNGI 186
Query: 186 VVYIIEQDKVTV 197
+ + ++ VT+
Sbjct: 187 SLAYVNKEGVTI 198
>gi|383320533|ref|YP_005381374.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
gi|379321903|gb|AFD00856.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
Length = 207
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 102/193 (52%), Gaps = 4/193 (2%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVY 64
Y G + V + N V A ++R GT +A + QKI+++ ++ + + G D Q +
Sbjct: 6 YKGTTTVGIICNNGVVFATERR-ATMGTFIASRDAQKIYKLTDNIAMTIAGSVGDGQRLA 64
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ ++ L+EL+ + MS L ++SN+L E ++ P++V+ ++ G+D + P I ++
Sbjct: 65 RILQVEAKLFELRRHGPMSINALSMLLSNILAETKYMPFYVQVLIGGVDK--SGPRIYSL 122
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D +G + F G S YG+ E ++P++ + E A+AL +A +R++ SG G
Sbjct: 123 DPLGGRIEEVKFSSTGSGSPIAYGVLEDRYKPDISVEQGVELAAKALESAMKRDSASGNG 182
Query: 185 AVVYIIEQDKVTV 197
+I +K +
Sbjct: 183 MQFAVITHEKFEI 195
>gi|225711612|gb|ACO11652.1| Proteasome subunit beta type-1 precursor [Caligus rogercresseyi]
Length = 238
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ V + G + V IA D R L+ N KIF++GS +G G D T +
Sbjct: 33 NGGTTVGIAGSDFVVIASDTRLASSYDILSRNVPKIFELGSGCVLGSCGCWCDVLTFIRV 92
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ Y ++++ L M+SN LY RRF PY++ ++ GLD E + +I D
Sbjct: 93 AESKLKDYHYTHGKELNTPALAQMLSNTLYRRRFFPYYIHNVLAGLD-EKGQGVIYTYDP 151
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQALVNACER 177
+G + GG + + + + + E +L D+ I ++A ER
Sbjct: 152 VGHCEKVK-MSCGGTSMELIQPILDNIVEKKNMTNGTMKDLSIDETVNIIHDCFISAAER 210
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G G + II ++ + + V R D
Sbjct: 211 QIQTGDGIMFKIITKEGIETKSVGLRRD 238
>gi|17737605|ref|NP_524115.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|12643277|sp|P40304.2|PSB1_DROME RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Proteasome 26 kDa subunit; Flags: Precursor
gi|7294080|gb|AAF49435.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|15291705|gb|AAK93121.1| LD24159p [Drosophila melanogaster]
gi|220947536|gb|ACL86311.1| Pros26-PA [synthetic construct]
Length = 235
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G + IA D R + K+F++ +G G DT ++
Sbjct: 28 NGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGS 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I+ R YE R M+ + + M+S +Y RRF PY+V ++ G+D E + ++ + D
Sbjct: 88 IKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNE-GKGVVYSYDP 146
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGM----CETLWEPNLEPDDLFETIAQALVNAC 175
IG + + + GG P D G E + L + + ++A
Sbjct: 147 IGHCEKAT-YRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAA 205
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++ II +D + VR + R D
Sbjct: 206 ERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 99/191 (51%), Gaps = 3/191 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + + M K+ V +A DKR G +AD +K++++ ++ + + G D Q++ +
Sbjct: 13 GTTTIGMVCKDGVVLATDKR-ATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLVRM 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I +Y+++ M P ++SN+L+ R P+ + ++ G D P + ++D
Sbjct: 72 ISAETKIYKMRTGNNMPPHSCATLLSNILHGNRHFPFLTQLIIGGYD-NLHGPKLFSLDP 130
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G +N+ + F G S G+ E ++ ++ + E +AL++A ER+A SG G
Sbjct: 131 VGGLNEETSFTSTGSGSPTALGVLEAEYKKDMTINKGKELAVKALISAMERDAYSGNGIS 190
Query: 187 VYIIEQDKVTV 197
+ +I+++ V +
Sbjct: 191 LAVIDENGVKI 201
>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
DSM 10642]
gi|302595823|sp|D3RX66.1|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
placidus DSM 10642]
Length = 210
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 99/191 (51%), Gaps = 3/191 (1%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+ G + V + K+ V +A +KR + + +KI+++ + + G D Q + +
Sbjct: 7 FKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKITDRIAMTTAGSVGDAQFLAR 66
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I+ NLY +++ + + K + ++SN+L R+ PY V+ ++ G+D A+ I ++D
Sbjct: 67 LIKVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGVDKTGAK--IYSID 124
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
IG + D V G S YG+ E + ++ D+ E +A+ +A +R++ SG G
Sbjct: 125 PIGGAIEEIDIVATGSGSPMAYGVLEDNYRKDINVDEAVELAIRAIYSAMKRDSASGDGI 184
Query: 186 -VVYIIEQDKV 195
VV I E++ V
Sbjct: 185 DVVKITEKEYV 195
>gi|197129784|gb|ACH46282.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S T+NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 27 FSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDC 86
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 87 LTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 145
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + +F GG S L + + + L + + +
Sbjct: 146 VYSFDPVGSYER-DNFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKDVF 204
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + + ++ R D
Sbjct: 205 ISAAERDVYTGDALKICIVTKDGIKEQTIQLRKD 238
>gi|350539311|ref|NP_001232140.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129774|gb|ACH46272.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129776|gb|ACH46274.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129778|gb|ACH46276.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129780|gb|ACH46278.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129781|gb|ACH46279.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129782|gb|ACH46280.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129783|gb|ACH46281.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S T+NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 27 FSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDC 86
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 87 LTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 145
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + +F GG S L + + + L + + +
Sbjct: 146 VYSFDPVGSYER-DNFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKDVF 204
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + + ++ R D
Sbjct: 205 ISAAERDVYTGDALKICIVTKDGIKEQTIQLRKD 238
>gi|197129773|gb|ACH46271.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S T+NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 27 FSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDC 86
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 87 LTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 145
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + +F GG S L + + + L + + +
Sbjct: 146 VYSFDPVGSYER-DNFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKDVF 204
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + + ++ R D
Sbjct: 205 ISAAERDVYTGDALKICIVTKDGIKEQTIQLRKD 238
>gi|211939905|gb|ACJ13433.1| proteasome subunit beta 1 [Helicoverpa armigera]
Length = 232
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G + I D R + +K+F++ +G G DT T+ +
Sbjct: 27 NGGSIVAIAGDDFAVIGADTRLSTGFSIYTREQKKLFKLSDKTVLGATGCWCDTLTLTRL 86
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +YE + N+ MS + M+S MLY +RF PY+V ++ GLD + + + + D
Sbjct: 87 LSARMQMYEHEHNKSMSTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDAD-GKGCVYSYDP 145
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMC---------ETLWEPNLEPDDLFETIAQALVNACER 177
IG + S++ GG QL + + + E + + + ++A ER
Sbjct: 146 IGHCER-SNYRAGGSAGAQLQPLLDNQIGLKNMQNVTEAPIPKEKALALLKDVFISAAER 204
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G + II + + R D
Sbjct: 205 DIYTGDCIYILIITASGIQEEKFELRKD 232
>gi|386876203|ref|ZP_10118332.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386805984|gb|EIJ65474.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 194
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V +T V A +KR ++ + +K F + S + GL D Q + +I
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKSTKKTFPITSQVGATCAGLVADMQILTLQI 62
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ +++ R + P + M+SNM+YERR+ P + +V G+ +PI+ +D +
Sbjct: 63 AALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGV---VDKPIMYTLDPL 119
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G V P ++ G ++ G+ + ++PN+ D+ + +A+ +A R++ SG G +
Sbjct: 120 GSV-LPDEYAAVGTGAEMALGVLDPQYKPNMSKDEAIDLAKRAVRSAALRDSASGDGIDI 178
Query: 188 YIIEQDKV 195
+I +D +
Sbjct: 179 LVITKDGI 186
>gi|392868|gb|AAC46465.1| proteasome subunit [Drosophila melanogaster]
Length = 235
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G + IA D R + K+F++ +G G DT ++
Sbjct: 28 NGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGS 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I+ R YE R M+ + + M+S +Y RRF PY+V ++ G+D E + ++ + D
Sbjct: 88 IKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNE-GKGVVYSYDP 146
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEP-----------NLEPDDLFE--------TI 167
IG + + + GG TL +P NLE D +
Sbjct: 147 IGHCEKAT-YRAGGTAG--------TLLQPVLDNQIGHKNMNLEDADKIKLTKEWAVSVA 197
Query: 168 AQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ ++A ER+ +G ++ II +D + VR + R D
Sbjct: 198 SDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>gi|56118302|ref|NP_001007906.1| proteasome subunit beta type-1 [Gallus gallus]
gi|38680347|gb|AAR26544.1| proteasome subunit beta-type [Gallus gallus]
Length = 237
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTAL-ADNFQKIFQVGSHMYVGLPGLATD 59
S T+NGG+++A+ G++ +A D R +G A+ + + K +++ +G G D
Sbjct: 26 FSPYTFNGGTVLAIAGEDFCIVASDTRLS-EGYAIHSRDSPKCYRLTEQTVIGCSGFHGD 84
Query: 60 TQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 85 CLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKG 143
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQA 170
+ + D +G + S F GG S L + + + L + + +
Sbjct: 144 AVYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKDV 202
Query: 171 LVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + ++ +D + ++ R D
Sbjct: 203 FISAAERDVYTGDALKICVVTKDGIKEETIQLRKD 237
>gi|389609037|dbj|BAM18130.1| proteasome 26kD subunit [Papilio xuthus]
Length = 232
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS+VA+ G++ I D R + +K+F++ +G G DT T+ +
Sbjct: 27 NGGSVVAIAGEDYAVIGADTRLSTGFSIYTREQKKLFKLSERTVLGATGCWCDTLTLTRL 86
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +YE + N+ M+ + M+S MLY +RF PY+V ++ GLD + + I + D
Sbjct: 87 LQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYVSNILAGLDAD-GKGCIYSYDP 145
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMC---------ETLWEPNLEPDDLFETIAQALVNACER 177
IG + S + GG QL + + + E + + + ++A ER
Sbjct: 146 IGHCER-STYRAGGSAGAQLQPLLDNQIGLKNMQNVSEAPVPKEKALALLKDVFISAAER 204
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G + II + + + R D
Sbjct: 205 DIYTGDCIYIIIITANGIQEEKFELRKD 232
>gi|118431082|ref|NP_147287.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121727671|sp|Q9YES4.2|PSB1_AERPE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|116062408|dbj|BAA79472.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 203
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 104/202 (51%), Gaps = 3/202 (1%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M++ G + + + ++ V +A DKR G L+ NF+KIF + + + GL D +
Sbjct: 1 MSFAGATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGL 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ + + L L+ + + + + +S++LY +F P+ VE +V G+DP EP +
Sbjct: 61 VRIVEGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDP-GGEPKLYV 119
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+D +G + + D+V G + +G+ E +++ + ++ + +AL + R+A +G
Sbjct: 120 LDPLGSIIE-EDYVAAGTGATTAFGLLEHVYKRGMSLEEAKKAAVEALRASMARDAGTGD 178
Query: 184 GAVVYIIE-QDKVTVRHVKTRM 204
G V ++ K ++ +K R+
Sbjct: 179 GIDVLVLPVSGKPSLETIKFRL 200
>gi|242023933|ref|XP_002432385.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212517808|gb|EEB19647.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 219
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 11/210 (5%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T NGGSIVA+ G++ I D R + N K+F++ +G G DT +
Sbjct: 12 TDNGGSIVAIAGEDFAVIGSDTRLSSNYSIFTRNQSKLFKLSDTTVLGCSGCWCDTLQLT 71
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ +R + +Y N+ M + M+S +LY +RF PY V ++ GLD + + + +
Sbjct: 72 KVVRAQMQMYFHDNNKVMVTPAVSQMLSTLLYYKRFMPYLVYNVLAGLDDQ-GKGCVYSY 130
Query: 125 DLIGCVNQPSDFVVGGPC--------SDQL-YGMCETLWEPNLEPDDLFETIAQALVNAC 175
D IG + S F GG +QL Y E + + L + + + A
Sbjct: 131 DPIGHCER-STFRAGGSSGALLQPLLDNQLGYHNMENVKKEQLTLEKALSVLKDVFIAAA 189
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G +Y+I++D + + R D
Sbjct: 190 ERDIYTGDSIAIYVIKKDGIKSENFDLRKD 219
>gi|156547425|ref|XP_001605493.1| PREDICTED: proteasome subunit beta type-1-like isoform 1 [Nasonia
vitripennis]
gi|345484470|ref|XP_003425047.1| PREDICTED: proteasome subunit beta type-1-like isoform 2 [Nasonia
vitripennis]
Length = 236
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS+VA+ G + IA D R + QK+F + +G G D T+ +
Sbjct: 31 NGGSVVALAGDDFSLIAADSRLSAGFSIYTRKQQKLFTLSETSVLGCSGCWCDILTLTRV 90
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +Y+ + ++ MS M+S MLY +RF PY++ ++ GLD E + +I D
Sbjct: 91 MAARMQMYKHEHHKTMSTPAAAQMLSTMLYYKRFFPYYINNILAGLDEE-GKGVIYRYDP 149
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGMC--ETLWEPNLEPDDLFETIAQALVNACER 177
+G + + +V GG P D G E + + L + + ++A ER
Sbjct: 150 VGHCEKNT-YVAGGSAGALLQPLLDNQVGYLNQENVEKIPLTKEKALSIVKDVFISAAER 208
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G G + II +D + R D
Sbjct: 209 DIYTGDGINIKIITKDGIVDETFDLRRD 236
>gi|157864139|ref|XP_001680783.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
gi|68124075|emb|CAJ02057.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
Length = 247
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+ A+ GK+ V +A D R + + Q KIFQ+ + Y+ G+ D + Q
Sbjct: 40 NGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADRLQLQQ 99
Query: 66 KIRFRQNLYELKENRKMSP-KVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+++R Y+ K+ P K + ++S MLY RRF PY+ MVVGLD E + +
Sbjct: 100 MLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLD-EEGHGVCYSY 158
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQALVNAC 175
D +G +P + G + L + + L P + ++ + A A
Sbjct: 159 DAVGST-EPFLYGTRGSAASFLEPVLDCLINRQHMTAQAPPEMTKEETLALLKNAFTGAA 217
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G +II +D V + R D
Sbjct: 218 ERDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|195375426|ref|XP_002046502.1| GJ12457 [Drosophila virilis]
gi|194153660|gb|EDW68844.1| GJ12457 [Drosophila virilis]
Length = 235
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G++ V IA D R + + + K+F++ +G G DT ++
Sbjct: 28 NGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKMSPKTVLGSTGCWCDTLSLTGL 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +YE + MS + M+S ++Y RRF PY+V ++ GLD + + + + D
Sbjct: 88 VKVRMQMYEHTHMKTMSTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKD-GKGAVYSYDP 146
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGM-CETLWEPNLEPDDLFETIAQA---LVNAC 175
IG + + + GG P D G + L L P +A A ++A
Sbjct: 147 IGHCERAT-YRAGGTAGALLQPVLDNQIGYKNQNLPADQLPPLTKERAVAVASDTFISAA 205
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++ II +D V R ++ R D
Sbjct: 206 ERDIYTGDSVLINIITKDGVEERKLQLRKD 235
>gi|255513744|gb|EET90009.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 210
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 2/176 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V IA D R + + +K++++ ++ + + GL D Q + +
Sbjct: 11 KGTTTVGLVCTDGVVIAADSRATMDTFIASTEARKVWKIDENLGMTIAGLVGDAQELIRI 70
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ + +Y++ E ++MSP+ ++S +L E + P++V+ +V G+ E + + N+D
Sbjct: 71 LKIQNEIYKMNERKQMSPRSAATLLSIILQENKMMPFYVQLIVGGV--EDGKGYVYNLDA 128
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
G Q S F G S G E ++P L D + A+AL+ A +R++ +G
Sbjct: 129 AGGYTQESRFTATGSGSLTALGYLEDSYKPGLTTKDAIKIAAKALLIAMQRDSATG 184
>gi|389611001|dbj|BAM19111.1| proteasome 26kD subunit [Papilio polytes]
Length = 232
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS+VA+ G + I D R + +K+F++ +G G DT T+ +
Sbjct: 27 NGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSERTVLGATGCWCDTLTLTRL 86
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +YE + N+ M+ + M+S MLY +RF PY+V ++ GLD + + I + D
Sbjct: 87 LQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYVSNILAGLDAD-GKGCIYSYDP 145
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMC---------ETLWEPNLEPDDLFETIAQALVNACER 177
IG + S + GG QL + + + E + + + ++A ER
Sbjct: 146 IGHCER-STYRAGGSAGAQLQPLLDNQIGLKNMQNVTEAPVPKEKALALLKDVFISAAER 204
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G + II + + + R D
Sbjct: 205 DIYTGDCIYIIIITANGIQEEKFELRKD 232
>gi|315427032|dbj|BAJ48649.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485700|dbj|BAJ51354.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 201
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 96/181 (53%), Gaps = 3/181 (1%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ Y G + + + GK+ V IA +KRF ++ +K+F++ + + G+ D Q +
Sbjct: 5 LYYPGATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNM 64
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+++ NLY L++ + S K + ++S L+ R+ PYF+E +V G+D + I+
Sbjct: 65 IKEVTAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGIDSQGPHVIV-- 122
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+D +G + + D+ V G ++ G+ E L+ ++ ++ + +A+ + R+A SG
Sbjct: 123 LDPLGSMIE-DDYAVVGTGAEVAVGVIENLYRKDMSATEIRDLATKAIKASIARDAGSGN 181
Query: 184 G 184
G
Sbjct: 182 G 182
>gi|225714644|gb|ACO13168.1| Proteasome subunit beta type-1 precursor [Lepeophtheirus salmonis]
Length = 238
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ + + GK+ V IA D R L+ + K+F +G + +G G D T +
Sbjct: 33 NGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVLGASGCWCDVLTFVRV 92
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R Y ++MS L M+S LY +RF PY++ ++ GLD E I D
Sbjct: 93 AESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGLDDEGRGAIF-TYDP 151
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEP---------NLEPDDLFETIAQALVNACER 177
+G + GG + + + + + E +L D+ + ++A ER
Sbjct: 152 VGHCEKVK-ISCGGASMEMIQPILDNVIEKKNMTNAELVDLSIDETVNIVHDCFISAAER 210
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G G V II +D + + V R D
Sbjct: 211 QIQTGDGVVFKIITKDGIETKRVGLRRD 238
>gi|290562593|gb|ADD38692.1| Proteasome subunit beta type-1 [Lepeophtheirus salmonis]
Length = 238
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ + + GK+ V IA D R L+ + K+F +G + +G G D T +
Sbjct: 33 NGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVLGASGCWCDVLTFIRV 92
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
R Y ++MS L M+S LY +RF PY++ ++ GLD E I D
Sbjct: 93 AESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGLDDEGRGAIF-TYDP 151
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEP---------NLEPDDLFETIAQALVNACER 177
+G + GG + + + + + E +L D+ + ++A ER
Sbjct: 152 VGHCEKVK-ISCGGASMEMIQPILDNVIEKKNMTNAELVDLSIDETVNIVHDCFISAAER 210
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G G V II +D + + V R D
Sbjct: 211 QIQTGDGVVFKIITKDGIETKRVGLRRD 238
>gi|229367074|gb|ACQ58517.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIGGLD-EHGKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L D + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHVPLTQDKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G V II ++ ++ + V R D
Sbjct: 204 ISAAERDVYTGDALRVCIITKEGISEQTVPLRKD 237
>gi|307214019|gb|EFN89226.1| Proteasome subunit beta type-1 [Harpegnathos saltator]
Length = 236
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS+VA+ G + +A D R + K+F + +G G DT T+ +
Sbjct: 31 NGGSVVALAGDDFCVVAADTRLSTGFSIYTRQQDKLFPLSKTTILGCSGCWCDTLTLTRL 90
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +Y+ + ++MS M+S MLY +RF PY+V ++ GLD E + I + D
Sbjct: 91 LSARMQMYKHEHQKEMSTPATAQMLSTMLYYKRFFPYYVSNILAGLD-ENGKGCIYSYDP 149
Query: 127 IGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACER 177
IG + + + GG L Y E + NL + + +A ER
Sbjct: 150 IGHCEKTT-YRAGGSAGALLQPLLDNQIGYKNQEGITPVNLTQEKAVAILKDVFTSAAER 208
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G G + II +D + R D
Sbjct: 209 DIYTGDGITIKIITKDGIQDISFALRKD 236
>gi|229367266|gb|ACQ58613.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIGGLD-EHGKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L D + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHVPLTQDKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G V II ++ ++ + V R D
Sbjct: 204 ISAAERDVYTGDALRVCIITKEGISEQTVPLRKD 237
>gi|21465654|pdb|1IRU|M Chain M, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465668|pdb|1IRU|1 Chain 1, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 213
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+I+A+ G++ +A D R + + K +++ +G G D T+ +
Sbjct: 7 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 66
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + + D
Sbjct: 67 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGAVYSFD 125
Query: 126 LIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACE 176
+G + S F GG S L + + + L D + ++A E
Sbjct: 126 PVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAE 184
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G + I+ ++ + V R D
Sbjct: 185 RDVYTGDALRICIVTKEGIREETVSLRKD 213
>gi|417397679|gb|JAA45873.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Desmodus rotundus]
Length = 240
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+I+A+ G++ +A D R + + + K +++ +G G D
Sbjct: 29 FSPYAFNGGTILAIAGEDFSIVASDTRLSEGFSIHSRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 147
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 148 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVF 206
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + V R D
Sbjct: 207 ISAAERDVYTGDTLKICIVTKDGIREETVPLRRD 240
>gi|54696302|gb|AAV38523.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|54696304|gb|AAV38524.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|61367228|gb|AAX42969.1| proteasome subunit beta type 1 [synthetic construct]
gi|61367236|gb|AAX42970.1| proteasome subunit beta type 1 [synthetic construct]
Length = 242
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+I+A+ G++ +A D R + + K +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGAVYSFD 153
Query: 126 LIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACE 176
+G + S F GG S L + + + L D + ++A E
Sbjct: 154 PVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAE 212
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G + I+ ++ + V R D
Sbjct: 213 RDVYTGDALRICIVTKEGIREETVSLRKD 241
>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595733|sp|A1RX71.1|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 204
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 97/184 (52%), Gaps = 7/184 (3%)
Query: 9 GSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIR 68
G+ V + + V +A +KR ++ + +K++++ M + GL D QT+ + +
Sbjct: 6 GTTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVE 65
Query: 69 FRQNLYELKENRKMSPKV--LLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
LYEL N +SPKV + ++S +LYERR PY+ E +V GLD E + + ++D
Sbjct: 66 AEMRLYELDSN--ISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSH--LYSLDP 121
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
IG + + D+V G + + E+ ++ ++ D+ +++ A +R+A SG G
Sbjct: 122 IGAIIE-DDYVALGSGTQLAISIVESNYKKDMSLDEALSLALKSVYAAMKRDAASGDGVD 180
Query: 187 VYII 190
V +I
Sbjct: 181 VLVI 184
>gi|126179146|ref|YP_001047111.1| proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
gi|302595840|sp|A3CUS9.1|PSB_METMJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|125861940|gb|ABN57129.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanoculleus marisnigri
JR1]
Length = 214
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 2/188 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + V +A + R + + +KI+Q+ + + G D Q + +
Sbjct: 10 KGTTTVGLIFDGGVVLATEMRATMGNMIASKRAKKIYQITPRIGLTTAGGVGDAQQLVRI 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ NL+E++ + MS ++SN L + R+ PY+V+ ++ G D E P + ++D
Sbjct: 70 LQVECNLFEMRRGKTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGFDDEG--PSVYSVDA 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + D V G S YG+ E + ++ DD + +A+ +A R++ SG +
Sbjct: 128 MGGATKEEDIVATGSGSPFAYGVLEDQYRAGMKEDDAKDLAVRAVRSAMRRDSASGEDIM 187
Query: 187 VYIIEQDK 194
V +I +DK
Sbjct: 188 VVVITKDK 195
>gi|225719776|gb|ACO15734.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
Length = 271
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 10/208 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQG-TALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+ + + G + IA D R G L+ N K+FQ+ +G G D T +
Sbjct: 65 NGGTTIGIAGPDFAVIASDTRLTSGGYDILSRNVPKVFQLSEKSVLGSCGCWCDVLTFVR 124
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ + Y + + L +ISN LY+RRF PY++ ++ GLD E + I D
Sbjct: 125 VMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYIHNVLAGLD-ENGQGCIYTYD 183
Query: 126 LIGCVNQPSDFVVGG------PCSDQLYGM--CETLWEPNLEPDDLFETIAQALVNACER 177
+GC+ + + G P D + + +L D+ I V+A ER
Sbjct: 184 PVGCIEKVTMSCSGASMELIQPILDNIIDKKNMTNATKKDLTIDESVNLIHDCFVSATER 243
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G G + II +D + + V R D
Sbjct: 244 QISTGDGIIFKIITKDGIETKSVGLRRD 271
>gi|4506193|ref|NP_002784.1| proteasome subunit beta type-1 [Homo sapiens]
gi|114610308|ref|XP_001140101.1| PREDICTED: proteasome subunit beta type-1 isoform 4 [Pan
troglodytes]
gi|332825501|ref|XP_003311646.1| PREDICTED: proteasome subunit beta type-1 [Pan troglodytes]
gi|397502108|ref|XP_003821710.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pan paniscus]
gi|397502110|ref|XP_003821711.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pan paniscus]
gi|397502112|ref|XP_003821712.1| PREDICTED: proteasome subunit beta type-1 isoform 3 [Pan paniscus]
gi|130853|sp|P20618.2|PSB1_HUMAN RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|220026|dbj|BAA00658.1| proteasome subunit C5 [Homo sapiens]
gi|18088777|gb|AAH20807.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|54696306|gb|AAV38525.1| proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|61357229|gb|AAX41355.1| proteasome subunit beta type 1 [synthetic construct]
gi|197692325|dbj|BAG70126.1| proteasome beta 1 subunit [Homo sapiens]
gi|197692585|dbj|BAG70256.1| proteasome beta 1 subunit [Homo sapiens]
gi|261860708|dbj|BAI46876.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|410210668|gb|JAA02553.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410259166|gb|JAA17549.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410301642|gb|JAA29421.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410335833|gb|JAA36863.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
Length = 241
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+I+A+ G++ +A D R + + K +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGAVYSFD 153
Query: 126 LIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACE 176
+G + S F GG S L + + + L D + ++A E
Sbjct: 154 PVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAE 212
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G + I+ ++ + V R D
Sbjct: 213 RDVYTGDALRICIVTKEGIREETVSLRKD 241
>gi|432331212|ref|YP_007249355.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
gi|432137921|gb|AGB02848.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
Length = 213
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + + + + V +A +KR + + +K++QV + + G D Q + +
Sbjct: 10 KGTTTIGIVFADGVILATEKRATMGLMIASKKAKKVYQVADRIGMTTAGGVGDAQQLARI 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ NLY+++ +R ++ ++SN L + R+ PY+V+ +V G+D + P + ++D
Sbjct: 70 LNVECNLYQIRRSRPITVGATATLLSNYLNQNRYFPYYVQLLVGGVDEKG--PSVYSVDA 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + + V G S YG+ E ++P + + E + L +A +R+A SG G
Sbjct: 128 MGGATKEEEIVATGSGSPMAYGVLEDRYKPGMTEEMAIEIAVRGLKSAMKRDAGSGEGIH 187
Query: 187 VYIIEQDK 194
V I +DK
Sbjct: 188 VVAITKDK 195
>gi|12653473|gb|AAH00508.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|157928354|gb|ABW03473.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|157928990|gb|ABW03780.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
Length = 241
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+I+A+ G++ +A D R + + K +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGAVYSFD 153
Query: 126 LIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACE 176
+G + S F GG S L + + + L D + ++A E
Sbjct: 154 PVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAE 212
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G + I+ ++ + V R D
Sbjct: 213 RDVYTGDALRICIVTKEGIREETVSLRKD 241
>gi|145592407|ref|YP_001154409.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595720|sp|A4WMZ0.1|PSB2_PYRAR RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145284175|gb|ABP51757.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
Length = 203
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 99/197 (50%), Gaps = 3/197 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + K+ V +A +KR L+ +K+F + + + G+ D Q++ + +
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGRKVFVIDDKLAIASAGIIADMQSLARIV 67
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ YEL+ +K + + + ++S +++ RR+ P+F E +V G+D E + I+ MD +
Sbjct: 68 KINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEVLVGGVDEEGSHLIV--MDPL 125
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + ++ G + + +T + ++ D + +AL A ER+ VSG G +
Sbjct: 126 GSLIE-DNYAALGTGAKLAISVLDTGYREDITLQDAKKLAVKALKAAIERDPVSGGGIDL 184
Query: 188 YIIEQDKVTVRHVKTRM 204
+I+Q VK ++
Sbjct: 185 VLIDQTGAKEEEVKVQL 201
>gi|225719280|gb|ACO15486.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
Length = 239
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 10/208 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQG-TALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+ + + G + IA D R G L+ N K+FQ+ +G G D T +
Sbjct: 33 NGGTTIGIAGPDFAVIASDTRLTSGGYDILSRNVPKVFQLSEKSVLGSCGCWCDVLTFVR 92
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ + Y + + L +ISN LY+RRF PY++ ++ GLD E + I D
Sbjct: 93 VMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYIHNVLAGLD-ENGQGCIYTYD 151
Query: 126 LIGCVNQPSDFVVGG------PCSDQLYGM--CETLWEPNLEPDDLFETIAQALVNACER 177
+GC+ + + G P D + + +L D+ I V+A ER
Sbjct: 152 PVGCIEKVTMSCSGASMELIQPILDNIIDKKNMTNATKKDLTIDESVNLIHDCFVSATER 211
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G G + II +D + + V R D
Sbjct: 212 QISTGDGIIFKIITKDGIETKSVGLRRD 239
>gi|62897947|dbj|BAD96913.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 241
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+I+A+ G++ +A D R + + K +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGAVYSFD 153
Query: 126 LIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACE 176
+G + S F GG S L + + + L D + ++A E
Sbjct: 154 PVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAE 212
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G + I+ ++ + V R D
Sbjct: 213 RDVYTGDALRICIVTKEGIREETVSLRKD 241
>gi|225716016|gb|ACO13854.1| Proteasome subunit beta type-1-A [Esox lucius]
Length = 237
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S ++NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E
Sbjct: 86 LTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GRGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L + + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKALQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + +V R D
Sbjct: 204 ISAAERDVYTGDALRICIVTKDGIKEENVPLRKD 237
>gi|398010249|ref|XP_003858322.1| proteasome beta 6 subunit, putative [Leishmania donovani]
gi|322496529|emb|CBZ31598.1| proteasome beta 6 subunit, putative [Leishmania donovani]
Length = 247
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+ A+ GK+ V +A D R + + Q KIFQ+ + Y+ G+ D + Q
Sbjct: 40 NGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADRLQLQQ 99
Query: 66 KIRFRQNLYELKENRKMSP-KVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+++R Y+ ++ P K + ++S MLY RRF PY+ MVVGLD E + +
Sbjct: 100 MLKYRVKWYQYNNGGRVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLD-EEGHGVCYSY 158
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQALVNAC 175
D +G +P + G + L + + L P + ++ + A A
Sbjct: 159 DAVGST-EPFLYGTRGSAASFLEPVLDCLINRQHMTAQAPPEMTKEETLAMLKNAFTGAA 217
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G +II +D V + R D
Sbjct: 218 ERDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121732295|sp|Q9YER0.2|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 219
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 4/184 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
+G + V + + V +A DKR + +KI + +++ + + GL D Q +
Sbjct: 24 SGTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDV 83
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R LYE+ K S + + +++SN+L+ +F PY V+ +V G D +P + +DL
Sbjct: 84 LREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYD---TQPRLYTLDL 140
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G + + + G S YG+ E + +L ++ + A+ +A R+A SG GA
Sbjct: 141 FGSITE-DKYTATGSGSPIAYGVLEERYREDLSVEEAIKVATTAIRSAVLRDAASGDGAD 199
Query: 187 VYII 190
V +I
Sbjct: 200 VVVI 203
>gi|116753407|ref|YP_842525.1| proteasome endopeptidase complex [Methanosaeta thermophila PT]
gi|121694316|sp|A0B5B1.1|PSB_METTP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|116664858|gb|ABK13885.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosaeta thermophila
PT]
Length = 207
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+ G + V + V +A + R + + +KI+Q+ + + G+ D Q + +
Sbjct: 5 FKGTTTVGIVCDGGVVLASESRATMGSFIASRTAKKIYQIDDLVGLTTAGVVGDAQALVR 64
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I+ LY ++ ++ K + +++SN+L RR+ P+ V+ +V G+D P I ++D
Sbjct: 65 MIQAEARLYRMQRGEPLTIKAITSLLSNILSARRYFPFLVQLVVGGVDK--MGPKIFSLD 122
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G + D V G S YG+ E+L++P L D +A+ A +R++ SG G
Sbjct: 123 ALGGQIEEHDIVSTGSGSPIAYGVLESLYKPGLSIQDGSVLCVRAVHTAMKRDSASGNGI 182
Query: 186 VVYIIEQDK 194
+ I +D+
Sbjct: 183 ALVRITKDR 191
>gi|348561415|ref|XP_003466508.1| PREDICTED: proteasome subunit beta type-1-like [Cavia porcellus]
Length = 241
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + + R D
Sbjct: 208 ISAAERDVYTGDALKICIVTKDGIREETIPLRKD 241
>gi|121543861|gb|ABM55595.1| putative proteasome subunit, beta type, 1 [Maconellicoccus
hirsutus]
Length = 229
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G + V IA D R + + KIF++ + G +D T +
Sbjct: 24 NGGSIVAVGGDDFVIIASDTRLSTGYSIYTRHQSKIFKLSKISALACAGCWSDVLTFTRL 83
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
I R +Y + N++MS L M+S M+Y +RF PY+V ++ GL+ + + I I
Sbjct: 84 INARMQMYLHEHNKEMSTPALAQMLSTMMYHKRFFPYYVSNILGGLEKDGSGWIYSYDPI 143
Query: 122 GNMDLIGCVNQPSDFVVGG-------PCSDQLYGMC--ETLWEPNLEPDDLFETIAQALV 172
GNM + S F GG P D G E + ++ + + +
Sbjct: 144 GNM-------ERSKFRAGGSSGALLQPLLDNQLGFANMENVESRSISLEKALAVVRDVFI 196
Query: 173 NACERNAVSGWGAVVYIIEQDKV 195
+A ER+ +G V +I +D++
Sbjct: 197 SAAERDIYTGDKIHVTVITKDEI 219
>gi|195441689|ref|XP_002068635.1| GK20318 [Drosophila willistoni]
gi|194164720|gb|EDW79621.1| GK20318 [Drosophila willistoni]
Length = 233
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G++ IA D R K+F++ + +G G +DT ++
Sbjct: 26 NGGSIVAIAGEDFAVIAADTRLSSGYNIHTRTQNKLFKLSENSVLGSTGCWSDTLSLTGL 85
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +YE + MS L M+S +Y RRF PY+V ++ G+D + + ++ + D
Sbjct: 86 LKVRMQMYEHTHLKVMSTDALAQMLSITMYNRRFFPYYVSNILAGVDKD-GKGVVYSYDP 144
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGM-CETLWE---PNLEPDDLFETIAQALVNAC 175
IG + + + GG P D G + L + P L D ++A
Sbjct: 145 IGHCERAT-YRAGGTAGPLLQPVLDNQIGYKNQNLSQDELPKLSIDRAVAVAFDTFISAA 203
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++ II +D++ + + R D
Sbjct: 204 ERDIYTGDSVIINIITKDEIKSQELPLRKD 233
>gi|340344597|ref|ZP_08667729.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519738|gb|EGP93461.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 197
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V +T + +A +KR ++ + +K F + S + GL D Q + +I
Sbjct: 7 GATAVGITFNGGIVLASEKRIAFGNFLVSKSSKKTFSITSKVGAACAGLVADMQILTLQI 66
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ +++ R + P + M+SNM+YERR+ P + +V G+ +PI+ +D +
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV---VDKPILYTLDPL 123
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G V P ++ G ++ G+ + ++PN+ ++ + +A+ +A R++ SG G +
Sbjct: 124 GSV-LPDEYAAVGTGAEMALGVLDPQFKPNMTQEEAIDLAKRAVRSAALRDSASGDGLDI 182
Query: 188 YIIEQD 193
++ +D
Sbjct: 183 LVVTKD 188
>gi|304315325|ref|YP_003850472.1| proteasome, subunit beta [Methanothermobacter marburgensis str.
Marburg]
gi|302588784|gb|ADL59159.1| predicted proteasome, subunit beta [Methanothermobacter
marburgensis str. Marburg]
Length = 210
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 96/190 (50%), Gaps = 3/190 (1%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V +T K+ V A ++R + KIF++ H+ + G D Q++
Sbjct: 6 TLKGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLM 65
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ ++ LY ++ + ++S + A+ +N+L+ RF P+ V+ ++ G+D A+ I ++
Sbjct: 66 KYLKAEAALYRMRNSERISIEAAAALAANILHSSRFYPFIVQTLLGGVDETGAK--IYSL 123
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + P FV G S YG+ E + L DD + +A+ +A ER+ SG G
Sbjct: 124 DPSGGM-IPDRFVSTGSGSPVAYGVLEDRYADELYVDDAIDIAIRAIKSAMERDTYSGNG 182
Query: 185 AVVYIIEQDK 194
+V + +++
Sbjct: 183 ILVATVTEEE 192
>gi|313231365|emb|CBY08480.1| unnamed protein product [Oikopleura dioica]
Length = 242
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S +++GG+ +A+ G + V +A D R G G + V H +G G D +
Sbjct: 32 SPYSWHGGTCLAIAGDDFVLMASDTRLGEHGGIYTRELNRNSPVTDHCAIGQCGFQGDAR 91
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
+ Q ++ + +YE + + + + AM+S MLY +RF PY+V +V GLD + +
Sbjct: 92 VLLQNVKAKIRIYEHQHMEQPTAPAIAAMLSTMLYYKRFFPYYVYNIVAGLDGDGKGSVF 151
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLE-------------PDDLFETIA 168
+ D +G +Q V C YG + L +P L+ P E +
Sbjct: 152 -SYDPVGSYDQ-----VPMVC----YGSAQNLIQPFLDNQIRRPHIKEDAAPKMTRERVR 201
Query: 169 Q----ALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
Q A ++A ER +G G V +I++ TV + R D
Sbjct: 202 QLAIDAFISASERETNTGDGITVTLIDKTGTTVETIPLRRD 242
>gi|429216737|ref|YP_007174727.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429133266|gb|AFZ70278.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 207
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
++Y G+ + + K+ V +A DKR ++ N +K++ + + + L GL D +
Sbjct: 3 ISYEQGTALGIKAKDGVVLATDKRMSYGSFIMSRNAKKVYLLNDRVGIALTGLYADVSGL 62
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ + + YE MS + + SN+LY + P+ +E ++ GLD + +P I
Sbjct: 63 VRIMNAEISYYETTNETTMSLYAISKLFSNILYSYKMLPFLIESIIGGLDRD-GKPKIYT 121
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+D +G V + VG + L G+ E + NL D+ + AL ER++ SG
Sbjct: 122 LDALGSVTEDKYMAVGSGGTTAL-GVLEYSYNDNLTIDEAEKIAITALKTTMERDSSSGD 180
Query: 184 GAVVYIIEQD 193
G + II+ +
Sbjct: 181 GIDLLIIKSE 190
>gi|15679213|ref|NP_276330.1| proteasome subunit beta [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6685781|sp|O27270.1|PSB_METTH RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2622311|gb|AAB85691.1| proteasome, beta subunit [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 210
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 96/190 (50%), Gaps = 3/190 (1%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V +T K+ V A ++R + KIF++ H+ + G D Q++
Sbjct: 6 TLKGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLM 65
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ ++ LY ++ + K+S + A+ +N+L+ RF P+ V+ ++ G+D A+ I ++
Sbjct: 66 KYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENGAK--IYSL 123
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + P FV G S YG+ E + L D+ + +A+ +A ER+ SG G
Sbjct: 124 DPSGGM-IPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNG 182
Query: 185 AVVYIIEQDK 194
+V + +++
Sbjct: 183 ILVATVTEEE 192
>gi|351714661|gb|EHB17580.1| Proteasome subunit beta type-1 [Heterocephalus glaber]
Length = 240
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + N K +++ +G G D
Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRNSPKCYKLTDKTVIGCSGFHGDC 88
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 147
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 148 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 206
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + + R D
Sbjct: 207 ISAAERDVYTGDALRICIVTKEGIREETIPLRKD 240
>gi|329764912|ref|ZP_08256501.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795409|ref|ZP_10378773.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
gi|329138581|gb|EGG42828.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 195
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M G + V +T ++ + +A +KR ++ +K F + + GL D Q +
Sbjct: 1 MYMPGATAVGITFQDGIVLASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQIL 60
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+I + +++ R + P + M+SNM+YERR+ P + +V G+ +PI+
Sbjct: 61 TLQIAALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGI---IDKPILFT 117
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+D +G V P ++ G ++ G+ + ++PN+ ++ + +A+ +A R++ SG
Sbjct: 118 LDPLGSV-LPDEYAAVGTGAEMALGVLDPQFKPNMTQEEAIDLAKRAVRSAALRDSASGD 176
Query: 184 GAVVYIIEQDKV 195
G V +I +D +
Sbjct: 177 GLDVLVITKDGI 188
>gi|47217169|emb|CAG11005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S T+NGG+++A+ G + +A D R + + + K +++ +G G D
Sbjct: 26 FSPYTFNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ MS + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + + + + L + + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMDGVQQVPLTQEKAIQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + II ++ + + V+ R D
Sbjct: 204 ISAAERDVYTGDALHICIITKEGIQEQTVQLRKD 237
>gi|401415060|ref|XP_003872026.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488248|emb|CBZ23493.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 247
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRF-GIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+ A+ GK V +A D R G + KIFQ+ + Y+ G+ D + Q
Sbjct: 40 NGGTTAAIAGKGFVILAGDTRLNGDYCLHCRHDQSKIFQLTPYTYMASNGMQADRVQLQQ 99
Query: 66 KIRFRQNLYELKENRKMSP-KVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+++R Y+ K+ P K + ++S MLY RRF PY+ M+VGLD E + +
Sbjct: 100 MLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMIVGLD-EEGNGVCYSY 158
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQALVNAC 175
D +G +P + G + L + + L P + ++ + A A
Sbjct: 159 DAVGST-EPFLYGTRGSAASFLEPVLDCLINRQHMTAQAPPEMTKEETLAMLKNAFTGAA 217
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G +II +D V + R D
Sbjct: 218 ERDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
gi|302595750|sp|A9A788.1|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595838|sp|A6VK02.1|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 219
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + K+ V +A DKR G +AD +K++++ ++ + + G D Q++ +
Sbjct: 14 GTTTVGLLCKDGVVLATDKR-ATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRL 72
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I +Y+++ M+P +ISN+L+ R P + ++ G D + ++D
Sbjct: 73 ISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGAKLF-SLDP 131
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G +N+ S F G S YG+ E + ++ D +AL +A +R+A SG G
Sbjct: 132 VGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALSSAMQRDAYSGNGIS 191
Query: 187 VYIIEQDKVTV 197
+ I +D V +
Sbjct: 192 LAHINKDGVNI 202
>gi|449278062|gb|EMC86029.1| Proteasome subunit beta type-1 [Columba livia]
Length = 237
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 13/215 (6%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTAL-ADNFQKIFQVGSHMYVGLPGLATD 59
S T+NGG+++A+ G++ +A D R +G A+ + K +++ +G G D
Sbjct: 26 FSPYTFNGGTVLAIAGEDFSLVASDTRLS-EGYAIHCRDSPKCYKLTERTVIGCSGFHGD 84
Query: 60 TQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 85 CLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKG 143
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQA 170
+ + D +G + S F G S L + + + L + + +
Sbjct: 144 AVYSFDPVGSYQRDS-FKAAGSASAMLQPLLDNQIGFKNMQNVEHLPLTLEKALQLVKDV 202
Query: 171 LVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + V+ R D
Sbjct: 203 FISAAERDVYTGDALKICIVTKDGIKEETVQLRKD 237
>gi|195998844|ref|XP_002109290.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
gi|190587414|gb|EDV27456.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
Length = 235
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T NGG+IV + G N +A D R + + KI+++ ++G G D T+
Sbjct: 28 TLNGGTIVGVAGDNFAILAGDTRLSEGFMIHSRDTSKIYKLTEKTFLGTCGFQGDVLTLT 87
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ + R +YE + +KMS + M+S +LY RRF PY+ ++ G+D + + I +
Sbjct: 88 RLLNARLTMYEFEHRKKMSSTAISQMLSTVLYYRRFFPYYTFNILAGIDTD-GKGCIYSY 146
Query: 125 DLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNAC 175
D +G + + + G S L Y E + L D I ++A
Sbjct: 147 DAVGNYEKHT-YHASGTASSMLQPLLDNQVGYLNQEGVRRVPLTIDKARTLIKDVFISAT 205
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + I D VT H R D
Sbjct: 206 ERDMYTGDSLHIVTITSDGVTEDHFPLRRD 235
>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
petrolearius DSM 11571]
gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
petrolearius DSM 11571]
Length = 209
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 2/188 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + V +A ++R + + +K++Q+ + + G D Q + +
Sbjct: 13 KGTTTVGLVFDGGVILATERRATMGNMIASKKAKKVYQIADRIGMTTAGGVGDAQQLARW 72
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ +LY ++ R+MS +++SN+L R PY+V+ +V G+D + P I ++D
Sbjct: 73 VQVECSLYNIRRGREMSVGASASLLSNILNNNRMMPYYVQLLVGGVD--SGGPSIYSVDA 130
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + D V G S YG+ E +E + D + +AL +A R++ SG
Sbjct: 131 LGGASPEDDIVATGSGSPFAYGVLEDRFEKGMPEKDCVDLAIRALRSAMRRDSASGEDIS 190
Query: 187 VYIIEQDK 194
V +I +DK
Sbjct: 191 VVVITKDK 198
>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
gi|222434899|gb|EEE42064.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
Length = 204
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 95/186 (51%), Gaps = 6/186 (3%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V +T K+ V A ++R + +KIF++ H+ + G D Q + + I
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+LY+++ N KMS K ++ +N+L R GP +V+ ++ G+D + +P + ++D
Sbjct: 68 EAEVSLYQMRNNDKMSVKAAASVTANIL---RSGPMYVQTLLGGMDGD--KPSLYSLDPA 122
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + + ++ G S YG+ E + + D+ E +A+ A ER+ SG G +V
Sbjct: 123 GGMIEDT-YISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYLV 181
Query: 188 YIIEQD 193
+ +D
Sbjct: 182 AKVTKD 187
>gi|195495065|ref|XP_002095108.1| GE22205 [Drosophila yakuba]
gi|194181209|gb|EDW94820.1| GE22205 [Drosophila yakuba]
Length = 235
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G + IA D R + K+F++ +G G DT ++
Sbjct: 28 NGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSTGCWADTLSLTGS 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R YE R M+ + + M+S +Y RRF PY+V ++ G+D E + ++ + D
Sbjct: 88 MKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNE-GKGVVYSYDP 146
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGMCE-TLWEPN---LEPDDLFETIAQALVNAC 175
IG + + + GG P D G L + + L + + ++A
Sbjct: 147 IGHCEKAT-YRAGGTAGTLLQPVLDNQIGHKNMNLADADKIKLTKERAVSVASDTFISAA 205
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++ II +D + VR + R D
Sbjct: 206 ERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390939081|ref|YP_006402819.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
fermentans DSM 16532]
gi|302595704|sp|B8D673.1|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390192188|gb|AFL67244.1| proteasome endopeptidase complex, beta subunit [Desulfurococcus
fermentans DSM 16532]
Length = 202
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 3/196 (1%)
Query: 9 GSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIR 68
G+ + + V +A +KR G L+ N +KI + +H+ VG GL D + + +R
Sbjct: 8 GTAIGLKTSEGVVLASEKRLTYDGFVLSRNARKIHMITNHIGVGFAGLMGDVNFLVKVLR 67
Query: 69 FRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIG 128
YEL+ R++ + L ++S +LY + P E +V G D E P + +D +G
Sbjct: 68 LEAKNYELQHGREIKTRSLAKLLSVILYSYKLAPMLTEVVVGGYDEEG--PSLYILDPVG 125
Query: 129 CVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVY 188
V + VG L G E + P L + E A+ ER+ +SG G +
Sbjct: 126 SVIEEKYVAVGSGAQLAL-GYIEPRYNPGLGLKEAEELAVNAVKTVIERDVLSGDGIDLV 184
Query: 189 IIEQDKVTVRHVKTRM 204
+I+++ + + +M
Sbjct: 185 VIDKNGYQSKEIIFKM 200
>gi|332264007|ref|XP_003281040.1| PREDICTED: proteasome subunit beta type-1 [Nomascus leucogenys]
Length = 241
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+++A+ G++ +A D R + + K +++ +G G D T+ +
Sbjct: 35 FNGGTVLAIAGEDFAIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGAVYSFD 153
Query: 126 LIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACE 176
+G + S F GG S L + + + L D + ++A E
Sbjct: 154 PVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAE 212
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G + I+ ++ + V R D
Sbjct: 213 RDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|341581964|ref|YP_004762456.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
gi|340809622|gb|AEK72779.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
Length = 203
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + K+ V +A D+R + L++N K+F + H+ + G D ++ +
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R LY K ++MS K L + SN+L+ RF PYF ++ G T EP + ++D+
Sbjct: 66 LRAEAKLYRAKVGKEMSVKALATLTSNVLHGSRFMPYFGWFLIAG---HTGEPGLYSVDM 122
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + F G + + + E ++ N+ ++ + +A+ A R+ +G G
Sbjct: 123 AGGVTEDR-FTAAGSGMEFAFSILEAEFKENMTLEEGVKLALRAIKAATRRDVFTGGGVT 181
Query: 187 VYIIEQD 193
+ + +
Sbjct: 182 LVTVTDE 188
>gi|66512107|ref|XP_395163.2| PREDICTED: proteasome subunit beta type-1 [Apis mellifera]
Length = 236
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS++A+ G N IA D R + QK+F + S +G G DT T+ +
Sbjct: 31 NGGSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLFPLSSKTVLGCSGCWCDTLTLTRI 90
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +YE + ++M + M+S MLY +RF PY+V ++ GLD E + + + D
Sbjct: 91 LSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLD-ENGKGCVYSYDP 149
Query: 127 IGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACER 177
IG + + + GG L Y E + L + I +A ER
Sbjct: 150 IGHC-EITKYRAGGSAGALLQPLLDNQIGYKNQEGVESVPLTQERAVAIIKDVFTSAAER 208
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G + II D + + R D
Sbjct: 209 DIYTGDSIFIKIITSDGIQNFNFALRKD 236
>gi|384944338|gb|AFI35774.1| proteasome subunit beta type-1 precursor [Macaca mulatta]
Length = 241
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 208 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|296483812|tpg|DAA25927.1| TPA: proteasome beta 1 subunit precursor [Bos taurus]
Length = 241
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G V I+ ++ + V R D
Sbjct: 208 ISAAERDVYTGDALKVCIVTKEGIREETVPLRKD 241
>gi|379005617|ref|YP_005261289.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
gi|375161070|gb|AFA40682.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
Length = 203
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 98/197 (49%), Gaps = 3/197 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + K+ V +A +KR L+ +K+F + + + G+ D Q++ + +
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQSLARIV 67
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ YEL+ +K + + + ++S +++ RR+ P+F E +V G+D E I+ MD +
Sbjct: 68 KINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEVLVGGVDEEGNHLIV--MDPL 125
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + ++ G + + +T + ++ D + +AL A ER+ VSG G +
Sbjct: 126 GSLIE-DNYAALGTGAKLAISVLDTGYREDITLQDAKKLAVKALKAAIERDPVSGGGIDL 184
Query: 188 YIIEQDKVTVRHVKTRM 204
+I+Q VK ++
Sbjct: 185 VLIDQTGAKEEEVKVQL 201
>gi|168046657|ref|XP_001775789.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672796|gb|EDQ59328.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + IA D R + L ++ KI Q+ + G D +++ +
Sbjct: 20 NGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKIHQITEKCVLASSGFQADVRSLQKN 79
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 80 LDARHQIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVYTYDAV 139
Query: 122 GNMDLIGCVNQPSDFVVGGPCSD-QLYGMCETLWEPN-----LEPDDLFETIAQALVNAC 175
G+ + G +Q S + P D QL + P L ++ + I +A
Sbjct: 140 GSYERSGYSSQGSGQTLIMPVLDNQLKSASPLVLPPRESSTPLTENEAVDLIKDTFASAA 199
Query: 176 ERNAVSGWGAVVYIIEQDKV 195
ER+ +G G + II +D +
Sbjct: 200 ERDIYTGDGVEIVIINKDGI 219
>gi|386781057|ref|NP_001247565.1| proteasome subunit beta type-1 [Macaca mulatta]
gi|355562210|gb|EHH18842.1| hypothetical protein EGK_15528 [Macaca mulatta]
gi|355749047|gb|EHH53530.1| hypothetical protein EGM_14190 [Macaca fascicularis]
gi|380788877|gb|AFE66314.1| proteasome subunit beta type-1 [Macaca mulatta]
Length = 241
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 208 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|432852541|ref|XP_004067299.1| PREDICTED: proteasome subunit beta type-1-B-like [Oryzias latipes]
Length = 237
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EQGKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L D + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMEGVEHVPLTKDKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
V+A ER+ +G + I+ ++ + +++ R D
Sbjct: 204 VSAAERDVYTGDALRICIVTKEGIEEQNIPLRKD 237
>gi|352682834|ref|YP_004893358.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275633|emb|CCC82280.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 204
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 6 YN-GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
YN G + V + K+ V +A +KR +L+ + +K+F V M + G+ D QT+
Sbjct: 5 YNVGATAVGIRAKDGVVLAAEKRITYGFYSLSSSGKKVFIVNDRMAIASAGVIADMQTLA 64
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ +R +YEL RK S + ++S +++ RR+ P+ E +V G D E P + +
Sbjct: 65 KILRVNAKMYELDAKRKPSVAAMAKLLSIIMFNRRWMPFIAEVLVGGYDEEG--PHVFVL 122
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D +G + + D+ G + G+ ++ ++ +++ + + A+ A ER+ VSG G
Sbjct: 123 DPVGSLIE-DDYAALGTGAKMAIGILDSGYKKDIDVVEARKLAINAIRAALERDPVSGGG 181
Query: 185 AVVYIIEQDKVTVRHVK 201
+ II + VK
Sbjct: 182 IDLVIITPTETREEEVK 198
>gi|426235057|ref|XP_004011507.1| PREDICTED: proteasome subunit beta type-1 [Ovis aries]
Length = 241
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G V I+ ++ + V R D
Sbjct: 208 ISAAERDVYTGDALRVCIVTKEGIREETVPLRKD 241
>gi|146070767|ref|XP_001463096.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
gi|134067179|emb|CAM65445.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
Length = 247
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+ A+ GK+ V +A D R + + Q KIFQ+ + Y+ G+ D + Q
Sbjct: 40 NGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADRLQLQQ 99
Query: 66 KIRFRQNLYELKENRKMSP-KVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+++R Y+ ++ P K + ++S +LY RRF PY+ MVVGLD E + +
Sbjct: 100 MLKYRVKWYQYNNGGRVPPTKAIAQLMSTLLYHRRFFPYYTFNMVVGLD-EEGHGVCYSY 158
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQALVNAC 175
D +G +P + G + L + + L P + ++ + A A
Sbjct: 159 DAVGST-EPFLYGTRGSAASFLEPVLDCLINRQHMTAQAPPEMTKEETLAMLKNAFTGAA 217
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G +II +D V + R D
Sbjct: 218 ERDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|346986249|ref|NP_001231282.1| proteasome subunit beta type-1 [Sus scrofa]
Length = 241
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ V V R D
Sbjct: 208 ISAAERDVYTGDALRICIVTKEGVREETVPLRKD 241
>gi|350396993|ref|XP_003484732.1| PREDICTED: proteasome subunit beta type-1-like [Bombus impatiens]
Length = 236
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS++A+ G + IA D R + QK+F + S +G G DT T+ +
Sbjct: 31 NGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCDTLTLTRL 90
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +YE + ++M + M+S MLY +RF PY+V ++ GLD E + + + D
Sbjct: 91 LSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLD-EDGKGCVYSYDP 149
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLW----EPNLEPDDLFETIAQAL-----VNACER 177
IG + + + GG L + + + +EP L + A A+ ++A ER
Sbjct: 150 IGHC-EVTKYRAGGSAGALLQPLLDNQIGYKNQEGVEPIPLTQEKAVAIIKDVFISAAER 208
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G + II +D + + R D
Sbjct: 209 DIYTGDSISIKIITKDGIQDSTFELRKD 236
>gi|395535314|ref|XP_003769673.1| PREDICTED: proteasome subunit beta type-1 [Sarcophilus harrisii]
Length = 244
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 33 FSPYVFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 92
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 93 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 151
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L + + +
Sbjct: 152 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHIPLSLERAMQLVKDVF 210
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + V R D
Sbjct: 211 ISAAERDVYTGDSLKICIVTKDGIKEETVPLRKD 244
>gi|297678538|ref|XP_002817127.1| PREDICTED: proteasome subunit beta type-1-like [Pongo abelii]
gi|297679681|ref|XP_002817653.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pongo abelii]
Length = 241
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+++A+ G++ +A D R + + K +++ +G G D T+ +
Sbjct: 35 FNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGAVYSFD 153
Query: 126 LIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACE 176
+G + S F GG S L + + + L D + ++A E
Sbjct: 154 PVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAE 212
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G + I+ ++ + V R D
Sbjct: 213 RDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|301779700|ref|XP_002925260.1| PREDICTED: proteasome subunit beta type-1-like [Ailuropoda
melanoleuca]
gi|281351745|gb|EFB27329.1| hypothetical protein PANDA_014727 [Ailuropoda melanoleuca]
Length = 241
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGYSVHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 208 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|126644014|ref|XP_001388169.1| proteasome subunit beta type 1 [Cryptosporidium parvum Iowa II]
gi|126117246|gb|EAZ51346.1| proteasome subunit beta type 1, putative [Cryptosporidium parvum
Iowa II]
Length = 246
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VA+ G + V IA D R + + K Q+ + + G+ D + +
Sbjct: 43 NGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGMLADINALRKT 102
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + LYE + N+ S + ++S +LY +RF PY+ ++ GLD E + ++ D
Sbjct: 103 LLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLD-EQGKGVVYGYDA 161
Query: 127 IGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
+G +Q +G S +Q+ G +T +E +++ + + ++ +A ER+
Sbjct: 162 VGSFDQHKFVALGSGGSLITSILDNQISGNNQTSFE-SIDKVGIINIVKDSITSASERDV 220
Query: 180 VSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G A V +I+ ++V ++ R D
Sbjct: 221 HTGDSAEVIVIDSSGISVSSLRLRED 246
>gi|195135135|ref|XP_002011990.1| GI16713 [Drosophila mojavensis]
gi|193918254|gb|EDW17121.1| GI16713 [Drosophila mojavensis]
Length = 235
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G + V IA D R + + + K+F++ +G G DT ++
Sbjct: 28 NGGSIVAIAGDDFVVIAADTRLSSGYSIHSRDQSKLFEMSPKTVLGSTGCWCDTLSLTGL 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +YE + M+ + M+S ++Y RRF PY+V ++ GLD + + + + D
Sbjct: 88 VKVRMQMYEHTHLKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKD-GKGAVYSYDP 146
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGMCETLWE----PNLEPDDLFETIAQALVNAC 175
IG + + + GG P D G P L + + ++A
Sbjct: 147 IGHCERAT-YRAGGSAGALLQPVLDNQIGYKNQNLSLDQLPPLTKERAVAVASDTFISAA 205
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++ II D + R ++ R D
Sbjct: 206 ERDIYTGDSVLINIITADGIEKRELQLRKD 235
>gi|126311312|ref|XP_001381658.1| PREDICTED: proteasome subunit beta type-1-like [Monodelphis
domestica]
Length = 244
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 33 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 92
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 93 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 151
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L + + +
Sbjct: 152 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLERAMQLVKDVF 210
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + + R D
Sbjct: 211 ISAAERDVYTGDSLKICIVTKDGIKEETIPLRKD 244
>gi|84370111|ref|NP_001033628.1| proteasome subunit beta type-1 precursor [Bos taurus]
gi|108860905|sp|Q2TBX6.1|PSB1_BOVIN RecName: Full=Proteasome subunit beta type-1; Flags: Precursor
gi|83638719|gb|AAI09495.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Bos taurus]
Length = 241
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G V I+ ++ + V R D
Sbjct: 208 ISAAERDVYTGDALKVCIVTKEGIRGETVPLRKD 241
>gi|340716619|ref|XP_003396794.1| PREDICTED: proteasome subunit beta type-1-like [Bombus terrestris]
Length = 236
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS++A+ G + IA D R + QK+F + S +G G DT T+ +
Sbjct: 31 NGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCDTLTLTRL 90
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +YE + ++M + M+S MLY +RF PY+V ++ GLD E + + + D
Sbjct: 91 LSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLD-EDGKGCVYSYDP 149
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLW----EPNLEPDDLFETIAQAL-----VNACER 177
IG + + + GG L + + + +EP L + A A+ ++A ER
Sbjct: 150 IGHC-EVTKYRAGGSAGALLQPLLDNQIGYKNQEGVEPVPLTQEKAVAIIKDVFISAAER 208
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G + II +D + + R D
Sbjct: 209 DIYTGDSISIKIITKDGIQDSTFELRKD 236
>gi|253747271|gb|EET02070.1| Proteasome subunit beta type 1 [Giardia intestinalis ATCC 50581]
Length = 220
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 12/208 (5%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T NGG+I+A+ G + IA D R L+ N +K+F V + G+ D Q +
Sbjct: 18 TDNGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLI 77
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ ++ Y LK R+M+ + ++S M+Y RR P++ +V G+D E + + +
Sbjct: 78 KHMKIESTDYHLKTQREMAIEQFTRLLSAMMYYRRSFPWYTSSIVAGIDSE-GKGAVYSY 136
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDD-------LFETIAQALVNACER 177
D+IG + G +C L E L D FE I A + ER
Sbjct: 137 DVIGSTLRTR----YGSAGTGNAMICPILDEAILPKSDAEITREFAFELIQSAFKSCAER 192
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G V I D + R + R D
Sbjct: 193 DIYTGDSVVAMCISADGIQERTFELRKD 220
>gi|440894478|gb|ELR46920.1| Proteasome subunit beta type-1, partial [Bos grunniens mutus]
Length = 241
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAVAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G V I+ ++ + V R D
Sbjct: 208 ISAAERDVYTGDALKVCIVTKEGIREETVPLRKD 241
>gi|322796740|gb|EFZ19173.1| hypothetical protein SINV_12036 [Solenopsis invicta]
Length = 237
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS+VA+ G + IA D R + K+F + + +G G DT T+ +
Sbjct: 32 NGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFSLSNTTILGCSGCWCDTLTLTRL 91
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +Y+ + ++MS M+S MLY +RF PY+V ++ GLD E + I + D
Sbjct: 92 LSARMQMYKHEHQKEMSTPAAAQMLSIMLYHKRFFPYYVSNILAGLD-ENGKGCIYSYDP 150
Query: 127 IGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACER 177
IG + + + GG L Y E + + + + +A ER
Sbjct: 151 IGHCEKTT-YRAGGSAGALLQPLLDNQIGYKNQEGVTPTPVTQEKAVAILKDVFTSAAER 209
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G G + II +D + R D
Sbjct: 210 DIYTGDGITIKIITKDGIKDSSFALRKD 237
>gi|410960369|ref|XP_003986764.1| PREDICTED: proteasome subunit beta type-1 [Felis catus]
Length = 241
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYRLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 208 ISAAERDVYTGDALKICIVTKEGIREETVPLRKD 241
>gi|335955152|gb|AEH76582.1| proteasome subunit beta type [Epinephelus bruneus]
Length = 225
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 14 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 73
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 74 LTLTKIIDARLKMYKHSNNKTMTCGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GKGA 132
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L D + +
Sbjct: 133 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHVPLTQDKAVQLVKDVF 191
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + II ++ ++ + + R D
Sbjct: 192 ISAAERDVYTGDALRICIINKEGISEQTIPLRKD 225
>gi|354486298|ref|XP_003505318.1| PREDICTED: proteasome subunit beta type-1-like [Cricetulus griseus]
Length = 240
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 147
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 148 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 206
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 207 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|73974057|ref|XP_532275.2| PREDICTED: proteasome subunit beta type-1 [Canis lupus familiaris]
Length = 241
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 208 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|403305890|ref|XP_003943482.1| PREDICTED: proteasome subunit beta type-1 [Saimiri boliviensis
boliviensis]
Length = 241
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 208 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|402868791|ref|XP_003898471.1| PREDICTED: proteasome subunit beta type-1 [Papio anubis]
Length = 241
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + + R D
Sbjct: 208 ISAAERDVYTGDALRICIVTKEGIREETIPLRKD 241
>gi|161528202|ref|YP_001582028.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595718|sp|A9A4A1.1|PSB1_NITMS RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|160339503|gb|ABX12590.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 198
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M G + V +T V A +KR ++ +K F + + GL D Q +
Sbjct: 3 MYMPGATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQIL 62
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+I + +++ R + P + M+SNM+YERR+ P + +V G+ +PI+
Sbjct: 63 SLQIAALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV---VDKPIMYT 119
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+D +G V P ++ G ++ G+ + ++PN+ D+ + +A+ A R++ SG
Sbjct: 120 LDPLGSV-LPDEYAAVGTGAEMALGVLDPQFKPNMTKDEAIDLAKRAVRAASLRDSASGD 178
Query: 184 GAVVYIIEQD 193
G V +I +D
Sbjct: 179 GVDVLVITKD 188
>gi|431904620|gb|ELK10002.1| Proteasome subunit beta type-1 [Pteropus alecto]
Length = 241
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHIPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G V I+ ++ + + R D
Sbjct: 208 ISAAERDVYTGDALKVCIVTKEGIREETIPLRKD 241
>gi|16758370|ref|NP_446042.1| proteasome subunit beta type-1 precursor [Rattus norvegicus]
gi|130854|sp|P18421.3|PSB1_RAT RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|56998|emb|CAA36987.1| proteasome subunit RC5 [Rattus norvegicus]
Length = 240
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLD-EEGKGA 147
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 148 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVF 206
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 207 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|432114954|gb|ELK36597.1| Proteasome subunit beta type-1 [Myotis davidii]
Length = 240
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 147
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 148 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 206
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 207 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|410672077|ref|YP_006924448.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
gi|409171205|gb|AFV25080.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
Length = 210
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V +A ++R + + +KI+Q+ + G D Q + +
Sbjct: 8 KGTTTVGIVCSDGVVMATEQRATMGHLIASKTAKKIYQIDDFAAMTTAGSVGDAQQIVRI 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I LY+++ M+ K L M+SN+L +R+ P V+ +V G D P + ++D
Sbjct: 68 ISVESKLYKMRRKESMTIKGLTTMLSNLLSGQRYYPLMVQLLVGGYDKHG--PELYSIDA 125
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G V G S YG+ E ++ N+ + E +AL NA +R++ SG G
Sbjct: 126 LGGNIDEKRVVATGSGSPIAYGVLEDRYKENMTTQEGVELAVRALHNAMKRDSASGDGID 185
Query: 187 VYIIEQDKVT 196
V II +D+ T
Sbjct: 186 VVIITKDQFT 195
>gi|291414594|ref|XP_002723544.1| PREDICTED: proteasome beta 1 subunit [Oryctolagus cuniculus]
Length = 241
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHIPLTLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 208 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|1165123|emb|CAA56702.1| component C5 of proteasome [Mus musculus]
Length = 225
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 14 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 73
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 74 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 132
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 133 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVF 191
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 192 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 225
>gi|378792314|pdb|3UNB|L Chain L, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792328|pdb|3UNB|Z Chain Z, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792342|pdb|3UNB|NN Chain n, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792356|pdb|3UNB|2 Chain 2, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792370|pdb|3UNE|L Chain L, Mouse Constitutive 20s Proteasome
gi|378792384|pdb|3UNE|Z Chain Z, Mouse Constitutive 20s Proteasome
gi|378792398|pdb|3UNE|NN Chain n, Mouse Constitutive 20s Proteasome
gi|378792412|pdb|3UNE|2 Chain 2, Mouse Constitutive 20s Proteasome
gi|378792426|pdb|3UNF|L Chain L, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792440|pdb|3UNF|Z Chain Z, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792454|pdb|3UNH|L Chain L, Mouse 20s Immunoproteasome
gi|378792468|pdb|3UNH|Z Chain Z, Mouse 20s Immunoproteasome
Length = 213
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 2 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 61
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 62 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 120
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 121 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVF 179
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 180 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 213
>gi|374633938|ref|ZP_09706303.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373523726|gb|EHP68646.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 212
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
I G + V + K+ V +A D+R +KI + + + G D Q
Sbjct: 13 IKILKGTTTVGLVVKDAVVLAADRRASAGFFVANKMVRKILYIDERIGITTAGSVADLQF 72
Query: 63 VYQKIRFRQNLYE---LKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
+Y + +N+Y + NR ++ K L ++N+L + ++ PY V+ ++ G D +P
Sbjct: 73 IYN---YLKNIYHYNYISGNRPVTVKALATYLTNILSQSKYFPYLVQILIGGYD---VQP 126
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
+ N+D +G + + + +V G S G+ E + P++ PD+ E +A+++A +R++
Sbjct: 127 RLFNLDYLGDMTEET-YVATGSGSPVAMGVLEDGYRPSMTPDEAVELATRAVLSAIKRDS 185
Query: 180 VSGWGAVVYIIEQD 193
+G G +V I +D
Sbjct: 186 FTGTGVIVTKITKD 199
>gi|149744029|ref|XP_001499422.1| PREDICTED: proteasome subunit beta type-1-like [Equus caballus]
Length = 241
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+I+A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTILAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMGLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 208 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|194750661|ref|XP_001957648.1| GF10515 [Drosophila ananassae]
gi|190624930|gb|EDV40454.1| GF10515 [Drosophila ananassae]
Length = 235
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G + V IA D R + + K+F++ +G G DT ++
Sbjct: 28 NGGSIVAIAGDDFVVIAADTRLSSGYNIHSRDQSKLFKLSDQTVLGSTGCWADTLSLTGL 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R YE R M+ + M+S +Y RRF PY+V ++ G+D + + ++ + D
Sbjct: 88 LKVRMQGYEHTHLRTMATDAVAQMLSITMYNRRFFPYYVSNILAGIDKD-GKGVVYSYDP 146
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGM----CETLWEPNLEPDDLFETIAQALVNAC 175
IG + + GG P D G + P L + + ++A
Sbjct: 147 IGHCERAF-YRAGGTAGTLLQPVLDNQIGHKNINLSSSELPKLTIERAVAIASDTFISAA 205
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++ II +D + + ++ R+D
Sbjct: 206 ERDIYTGDSVLINIITKDGIEEKKLQLRLD 235
>gi|7242197|ref|NP_035315.1| proteasome subunit beta type-1 precursor [Mus musculus]
gi|2499837|sp|O09061.1|PSB1_MOUSE RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|1165122|emb|CAA56701.1| component C5 of proteasome [Mus musculus]
gi|1698584|gb|AAB37251.1| proteasome beta-subunit C5 [Mus musculus]
gi|17390820|gb|AAH18351.1| Proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
gi|26346380|dbj|BAC36841.1| unnamed protein product [Mus musculus]
gi|39754751|gb|AAR30867.1| proteasome beta-subunit C5 [Mus musculus]
gi|74198429|dbj|BAE39698.1| unnamed protein product [Mus musculus]
gi|74205097|dbj|BAE21005.1| unnamed protein product [Mus musculus]
gi|148688516|gb|EDL20463.1| proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
Length = 240
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 147
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 148 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVF 206
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 207 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|395839143|ref|XP_003792460.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1
[Otolemur garnettii]
Length = 343
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 132 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 191
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 192 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 250
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 251 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 309
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + R D
Sbjct: 310 ISAAERDVYTGDALKICIVTRDGTREETIPLRKD 343
>gi|195439248|ref|XP_002067543.1| GK16137 [Drosophila willistoni]
gi|194163628|gb|EDW78529.1| GK16137 [Drosophila willistoni]
Length = 229
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGGSIVA+ G++ V IA D R + A+ Q K+FQ+ +G G DT V
Sbjct: 29 NGGSIVAIAGEDFVTIAGDTRMVNEDDAIVSRSQSKLFQLTPMTAIGSVGCFADTLAVVN 88
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I+ ++Y+L +++S L M+S +Y RF PYFV +V G+D + + + D
Sbjct: 89 VIKQNIHMYQLTHLKRISTDALAQMLSISMYSHRFFPYFVSNIVAGID-RNGKGAVFSYD 147
Query: 126 LIGCVNQPSDFVVGG------PCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
IG + + G P D + L EP L + E + ++ A ++
Sbjct: 148 PIGHHERKAYDAAGTGFELMIPAMDYF---IKNLKEP-LTIEIAAEITRKVMIVADNKDV 203
Query: 180 VSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G A++YII ++ V + + R D
Sbjct: 204 YTGDSAIMYIITKNGVEAKKMPLRKD 229
>gi|410912074|ref|XP_003969515.1| PREDICTED: proteasome subunit beta type-1-B-like [Takifugu
rubripes]
Length = 237
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G + +A D R + + + K +++ +G G D
Sbjct: 26 FSPYAFNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ MS + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + + L + + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMENVQQVPLSQEKAIQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + II ++ + + + R D
Sbjct: 204 ISAAERDVYTGDALRICIITKEGIKEQTIPLRKD 237
>gi|385805286|ref|YP_005841684.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
Kam940]
gi|383795149|gb|AFH42232.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
Kam940]
Length = 199
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
+ T+ G ++V + N IA ++R + ++ +K++ + + G GL DTQ
Sbjct: 2 VETFQGATVVGLKFSNGAVIAGEERMTYRTFIMSSQAKKVYLINERLGAGTAGLMGDTQN 61
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+ + R YE + KMS K ++SN+LY R P + E ++ G+D + +P +
Sbjct: 62 IIRIFREEIRYYETEIKSKMSTKSAAKLLSNILYSYRGFPLYGEFILAGIDDK--KPTLV 119
Query: 123 NMDLIGCVNQPSDFVV--GGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+D G V + + GGP + G+ E L++ N++ + +A+ R+A+
Sbjct: 120 VLDPAGSVLEDEYMAIGTGGPVA---IGVLEELYQQNIDEKTAIDLAIRAVKQGVRRDAM 176
Query: 181 SGWGAVVYIIEQDK 194
SG G++ Y++ D+
Sbjct: 177 SG-GSIDYVVISDR 189
>gi|297619257|ref|YP_003707362.1| proteasome endopeptidase complex subunit beta [Methanococcus voltae
A3]
gi|297378234|gb|ADI36389.1| proteasome endopeptidase complex, beta subunit [Methanococcus
voltae A3]
Length = 215
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 95/191 (49%), Gaps = 2/191 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V +A DKR G +AD +K++ + ++ + + G D Q++ +
Sbjct: 10 GTTTVGIACADGVVLATDKR-ATMGNLIADKEAKKLYPIDEYIAMTIAGSVGDAQSLVRI 68
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I +Y+++ MSP ++SN+L+ R P + +V G D EP + ++D
Sbjct: 69 ISAETKIYKMRTGNNMSPLACTTLMSNVLHGNRHFPLMNQLIVGGYDVCNDEPQLYSLDA 128
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G +N+ + F G S YG+ E + L+ + +A+ +A +R+A SG G
Sbjct: 129 VGGINEETTFTSTGSGSPTAYGVLEAEYVNKLKTSAALKLAVKAISSAMKRDAYSGNGIS 188
Query: 187 VYIIEQDKVTV 197
+ I+++ V +
Sbjct: 189 LAKIDKNGVKI 199
>gi|397780986|ref|YP_006545459.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
gi|396939488|emb|CCJ36743.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
Length = 214
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + K+ V +A + R + + +KI+++ + + G D Q + +
Sbjct: 10 KGTTTVGLIFKDGVVLATEMRATMGNLIASKRAKKIYKITPRIGMTTAGGVGDAQQLVRI 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I+ +LYE++ R MS ++SN L + R+ PY+V+ ++ G D P + ++D
Sbjct: 70 IQVECSLYEMRRGRTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGFDE--GGPSVYSVDA 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + + V G S YG+ E + P++ ++ + +A+ +A R+A SG +
Sbjct: 128 MGGATREEEIVATGSGSPFAYGVLEDQYRPDMTEEEAKDLAIRAVRSAMRRDAGSGENIM 187
Query: 187 VYIIEQDK 194
V +I +DK
Sbjct: 188 VVVIMKDK 195
>gi|221117643|ref|XP_002165958.1| PREDICTED: proteasome subunit beta type-1-A-like [Hydra
magnipapillata]
Length = 226
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
GGS++A+ G++ IA D R + N K +Q+ +G G D T+ +
Sbjct: 21 QGGSLLAIAGEDFAVIASDTRLSEGFLIHSRNIPKTYQLTDTTILGSCGFHGDVLTLTKN 80
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I+ R +YE + + MS + M+S LY +RF PY+ ++ GLD + + I + D
Sbjct: 81 IKTRLVMYEHEHFKTMSCSSIAQMLSTTLYYKRFFPYYTYNIIAGLDSD-GKGAIYSFDP 139
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCET-LWEPNL-EPDDL-------FETIAQALVNACER 177
+G + + + GG CS L + + + NL + D+ E I ++A ER
Sbjct: 140 VGSYERET-YRAGGSCSAMLQSFLDNQIGQKNLAKKSDIPLSLERCVELIKDVFISAAER 198
Query: 178 NAVSGWGAVVYIIEQD 193
+ +G G ++ II ++
Sbjct: 199 DIETGDGVLISIITKE 214
>gi|407464585|ref|YP_006775467.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407047773|gb|AFS82525.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 194
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V +T V A +KR ++ + +K F + + + GL D Q + +I
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKSTKKTFPITNKVGATCAGLVADMQILTLQI 62
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ +++ R + P + M+SNM+YERR+ P + +V G+ +PI+ +D +
Sbjct: 63 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV---VDKPIMYTLDPL 119
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G V P ++ G ++ G+ + ++PN+ D+ + +A+ A R++ SG G +
Sbjct: 120 GSV-LPDEYAAVGTGAEMALGVLDPQFKPNMTKDEAVDLAKRAVRAAALRDSASGDGLDI 178
Query: 188 YIIEQD 193
+I +D
Sbjct: 179 LVITKD 184
>gi|37231712|gb|AAH58455.1| Proteasome (prosome, macropain) subunit, beta type 1 [Rattus
norvegicus]
gi|149047099|gb|EDL99819.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_a
[Rattus norvegicus]
Length = 240
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 147
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 148 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVF 206
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 207 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|225707182|gb|ACO09437.1| Proteasome subunit beta type 1-A [Osmerus mordax]
Length = 237
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S ++NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E
Sbjct: 86 PTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLD-EQGRGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L + + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMENVQHLPLSQEKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + II ++ + V R D
Sbjct: 204 ISAAERDVYTGDALRICIITKEGIKEETVPLRKD 237
>gi|348534148|ref|XP_003454565.1| PREDICTED: proteasome subunit beta type-1-A-like [Oreochromis
niloticus]
Length = 237
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L D + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMEGVEHVPLTKDKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + +I ++ + + R D
Sbjct: 204 ISAAERDVYTGDALRICVITKEGINEETIPLRKD 237
>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
Length = 204
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + K+ V +A D R + L+ KIFQ+ H+ + G D ++ +
Sbjct: 5 KGTTTVGIVCKDGVVLAADMRASLGNMVLSKGVSKIFQIDDHLALAGAGSVGDILSLVRL 64
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R LY + R+MS K L + SN+L RR+ PYF +V G D +P + ++D+
Sbjct: 65 LRAEAKLYRARVGREMSTKALATLTSNILSGRRYFPYFGWFLVAGYDE---KPGLYSIDM 121
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G + + +V G + Y + + ++ + + +A+ A +R+ +G G +
Sbjct: 122 AGGITEDK-YVSAGSGMEFAYSVLDNEYDEKMNVKKGVKLAIKAINTAIKRDVFTGDGIM 180
Query: 187 VYIIEQD 193
V +I ++
Sbjct: 181 VVVITKE 187
>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
gi|302595842|sp|A5UM14.1|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
Length = 204
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 95/186 (51%), Gaps = 6/186 (3%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V +T K+ V A ++R + +KIF++ H+ + G D Q + + I
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+LY+++ N K+S K ++ +N+L R GP +V+ ++ G+D + +P + ++D
Sbjct: 68 EAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMDGD--KPSLYSLDPA 122
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + + ++ G S YG+ E + + D+ E +A+ A ER+ SG G +V
Sbjct: 123 GGMIEDT-YISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYLV 181
Query: 188 YIIEQD 193
+ +D
Sbjct: 182 AKVTKD 187
>gi|225704042|gb|ACO07867.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S ++NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 86 LTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L + + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + V R D
Sbjct: 204 ISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237
>gi|225703280|gb|ACO07486.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S ++NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 86 LTLTEIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L + + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + V R D
Sbjct: 204 ISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237
>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
evestigatum Z-7303]
gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
evestigatum Z-7303]
Length = 211
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + + V +A ++R + + +KI+Q+ + + G D Q + + I
Sbjct: 10 GTTTVGIACSDAVVLATERRATMGNFIASKTAKKIYQIDDRIGMTTAGSVGDAQQIVRII 69
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
L++++ N ++ K + ++SN+L +R+ P V+ +V G+D P + ++D +
Sbjct: 70 SVESKLFKMRRNEPITIKGITTLLSNLLSGQRYFPLMVQLIVGGVDK--TGPNMYSLDPL 127
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + ++ V G S YG+ E + ++ D+ E +AL NA +R++ SG G V
Sbjct: 128 GGRIEETNIVATGSGSPITYGLLEDRYHKDMTSDEGAELAIRALHNAMKRDSASGDGIDV 187
Query: 188 YIIEQD 193
+I +D
Sbjct: 188 VVITKD 193
>gi|225705074|gb|ACO08383.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S ++NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 86 LTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L + + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + V R D
Sbjct: 204 ISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237
>gi|124028410|ref|YP_001013730.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
gi|302595717|sp|A2BN24.1|PSB1_HYPBU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|123979104|gb|ABM81385.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
Length = 204
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 103/199 (51%), Gaps = 7/199 (3%)
Query: 4 MTY---NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
M+Y G + V + G V +A +KR G ++ +K++++ ++ + L GL D
Sbjct: 1 MSYEYGTGATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADL 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE-TAEP 119
Q + + +R Y + R++S + + +++ +LY ++ P+ E +V GL+ + TA+
Sbjct: 61 QAISKILRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEADGTAKL 120
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
+ MD +G + + D+ G + G+ E + ++ DD + A+ A ER+A
Sbjct: 121 YV--MDPLGSLIE-DDYAAIGSGAPIAIGILENGYSKDMSVDDAKKLAIAAVRAAIERDA 177
Query: 180 VSGWGAVVYIIEQDKVTVR 198
+SG G + +I +++ +++
Sbjct: 178 MSGDGIDLLVIRREEDSIK 196
>gi|17380207|sp|Q9IB84.1|PSB1A_CARAU RecName: Full=Proteasome subunit beta type-1-A; AltName: Full=20S
proteasome beta-6 subunit A; Short=B6-A
gi|7768839|dbj|BAA95591.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 238
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 27 FSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 86
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E
Sbjct: 87 LTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GRGA 145
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + + L + + +
Sbjct: 146 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVF 204
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + II ++ + V R D
Sbjct: 205 ISAAERDVYTGDALKICIITKEGIREEIVPLRKD 238
>gi|209732446|gb|ACI67092.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S ++NGG+++A+ G++ +A D R + + + K +++ + +G G D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVIGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 86 LTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L + + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLNQEKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 204 ISAAERDVYTGDALRICIVTKEGIKEETVPLRKD 237
>gi|17380206|sp|Q9IB83.1|PSB1B_CARAU RecName: Full=Proteasome subunit beta type-1-B; AltName: Full=20S
proteasome beta-6 subunit B; Short=B6-B
gi|7768841|dbj|BAA95592.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 237
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E
Sbjct: 86 LTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GRGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + + L + + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + II ++ + V R D
Sbjct: 204 ISAAERDVYTGDALKICIITKEGIREEIVPLRKD 237
>gi|145350076|ref|XP_001419449.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579680|gb|ABO97742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 227
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A+ G+N V A D R + L N++K+ Q+ + G D QT+ +
Sbjct: 18 NGGTVLAVAGENYVICASDTRMSTGYSILTRNYEKVDQMSPKTLMASAGFMADAQTLKKT 77
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
++ R YE + + + M+SN LY RRF PY+ +V GLD E + +
Sbjct: 78 LKARCKQYEFQNKKPIGCVSFAQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAVFTYDAV 137
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + Q S + P D L P L E I A
Sbjct: 138 GSYERTNYSCQGSGQALIMPVLDNQLKTVSPLVLPAVSSATPLSEAAAIELIKDCFATAA 197
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++I+ D V + R+D
Sbjct: 198 ERDIYTGDRVELWIMNADGVRKEEMPLRLD 227
>gi|307170452|gb|EFN62722.1| Proteasome subunit beta type-1 [Camponotus floridanus]
Length = 236
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS+VA+ G + IA D R + K+F + + +G G DT T+ +
Sbjct: 31 NGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFPLSNTTILGCSGCWCDTLTLTRL 90
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +Y+ + ++M+ M+S MLY +RF PY+V ++ GLD E + I + D
Sbjct: 91 LSARMQMYKHEHQKEMTTPAAAQMLSIMLYHKRFFPYYVSNILAGLD-ENGKGCIYSYDP 149
Query: 127 IGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACER 177
IG + + + GG L Y E + L + + +A ER
Sbjct: 150 IGHCEKTT-YRAGGSAGALLQPLLDNQIGYKNQEGVTPAVLTQEKAVAILKDVFTSAAER 208
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G G + II +D + R D
Sbjct: 209 DIYTGDGISIKIITKDGIKDSSFALRKD 236
>gi|442749997|gb|JAA67158.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Ixodes ricinus]
Length = 232
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G++ V IA D R + K+F++ +G G D T +
Sbjct: 27 NGGSIVAIAGEDFVVIASDSRLSAGYHIYTRDQSKLFKLSDKCILGSGGCWCDILTFTRF 86
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y + ++ MS + +I MLY +RF PY++ ++ GLD E I +
Sbjct: 87 LEARMKMYLHEHHKPMSTPAVAQLIVTMLYHKRFFPYYISNILAGLDEEGKGCIYSYDPV 146
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEP--DDLFETIAQALVNACERNA 179
G+ + + + S + P D G + + P + I ++A ER+
Sbjct: 147 GHCERVQYRSGGSGSALLQPLLDSQIGFKNQVGAVAVPPTRERAISIIKDVFISAAERDM 206
Query: 180 VSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G +V II++D V R D
Sbjct: 207 YTGDSVIVNIIDKDGVHEERFPLRRD 232
>gi|156084624|ref|XP_001609795.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154797047|gb|EDO06227.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 217
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 8/193 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG++VA NC IA D R I N K+ ++ +G G+ D ++
Sbjct: 13 NGGTVVAAVWNNCAVIAADTRLSIGYAIHTRNVSKLKKLTQTCVIGTSGMQADMHALHSA 72
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + LY K +R+ V+ ++S +LY RRF PY+ ++ G+D E I D
Sbjct: 73 LERQIELYRFKHHREPGISVIAQLLSTILYSRRFFPYYTFNILCGVD-ENGRGITCGFDA 131
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEP-------DDLFETIAQALVNACERNA 179
IG + G S + + L N + ++L I A+ +A ER+
Sbjct: 132 IGNYGFDAYMAKGTSSSLIMSILDNHLTSRNQQKHNEIQSLEELINVIKGAMTSAVERDI 191
Query: 180 VSGWGAVVYIIEQ 192
+G A V +I+
Sbjct: 192 FTGDAAEVIVIDS 204
>gi|296199648|ref|XP_002747247.1| PREDICTED: proteasome subunit beta type-1-like [Callithrix jacchus]
Length = 241
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + K +++ +G G D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + S F GG S L + + + L D +
Sbjct: 149 VYSFDPVGSYQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + + R D
Sbjct: 208 ISAAERDVYTGDALRICIVTKEGIREETLPLRKD 241
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 97/197 (49%), Gaps = 3/197 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + K+ V +A +KR L+ +K+F + + + G+ D QT+ + +
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFIINDKLAIASAGIIADMQTLARIL 67
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ YEL+ +K + + + ++S +++ RR P++ E +V G+D E I+ MD +
Sbjct: 68 KLNVMSYELEVRKKPTVRAMAKLLSIIMFSRRLLPFYAEVLVGGVDEEGPHLIV--MDPL 125
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + ++ G + + + + P++ + + QA+ A ER+ VSG G +
Sbjct: 126 GSLIE-DNYAALGTGAKLAVSLLDATYRPDISLQEAKKLAVQAIKAAIERDPVSGGGIDL 184
Query: 188 YIIEQDKVTVRHVKTRM 204
+++ + VK +M
Sbjct: 185 AVVDNNGAREEEVKIQM 201
>gi|124028413|ref|YP_001013733.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
gi|302595715|sp|A2BN27.1|PSB2_HYPBU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|123979107|gb|ABM81388.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
Length = 212
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 4/187 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + ++ V +A D+R +KI ++ +M + GL D Q + +
Sbjct: 14 KGTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTTAGLVADAQMLAEW 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + YE+ R+MS +S +L+ +F PY V+ ++ G D +P + N+D
Sbjct: 74 LANHTHYYEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGGYD---TQPRLYNIDW 130
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + +V G S G+ E + PNL ++ E +A+ ++ R+ +G G
Sbjct: 131 FGSVTEEK-YVATGSGSPTAIGVIEDQYSPNLSMEEAVELAKRAVASSIRRDTFTGNGVD 189
Query: 187 VYIIEQD 193
V +I +D
Sbjct: 190 VVVIGKD 196
>gi|302774737|ref|XP_002970785.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
gi|302818938|ref|XP_002991141.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300141072|gb|EFJ07787.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300161496|gb|EFJ28111.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
Length = 226
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L K+F++ + G D +T+ +
Sbjct: 17 NGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMASSGFQADVRTLQKN 76
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ RQ Y + + MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 77 LEARQKGYYHQHGKPMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCVYTYDAV 136
Query: 122 GNMDLIGCVNQPSDFVVGGPCSD-QLYGMCETLWEPN-----LEPDDLFETIAQALVNAC 175
G+ + G Q S + P D QL L+ P L + E + +A
Sbjct: 137 GSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPPRETATPLTEQEALEIVKDTFASAT 196
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER +G G + +I +D + ++ + D
Sbjct: 197 ERQIYTGDGLEIVVINKDGIHKEYLDLKKD 226
>gi|448468124|ref|ZP_21599755.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
gi|445810867|gb|EMA60881.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
Length = 243
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 5/195 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V +A D R + G + + QK+ +V + + G + Q++
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQSLIST 107
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ +LYE + + M+ + L + N+L F Y V+P++ G+D E A I ++D
Sbjct: 108 LKAETSLYETRRGKDMTMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGAH--IYSIDA 163
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + ++ V G S G+ E + ++ D+ E A+A+ +A ER+ SG G
Sbjct: 164 LGGTTE-EEYTVTGSGSQYALGVLEQEYHDDVTVDEATEIAAKAIQSAVERDLASGNGIN 222
Query: 187 VYIIEQDKVTVRHVK 201
V ++ +D V + K
Sbjct: 223 VAVVTEDGVDISRYK 237
>gi|407462234|ref|YP_006773551.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045856|gb|AFS80609.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 194
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V +T V A +KR ++ +K F + + GL D Q + +I
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 62
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ +++ R + P + M+SNM+YERR+ P + +V G+ +PI+ +D +
Sbjct: 63 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV---VDKPIMYTLDPL 119
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G V P ++ G ++ G+ + ++PN+ D+ + +A+ A R++ SG G +
Sbjct: 120 GSV-LPDEYAAVGTGAEMALGVLDPQFKPNMTKDEAIDLAKRAVRAASLRDSASGDGLDI 178
Query: 188 YIIEQD 193
+I +D
Sbjct: 179 LVITKD 184
>gi|390364342|ref|XP_001187732.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 229
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKR----FGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
T+NGG+I+AM G + IA D R F I N+ ++ + H+ P L
Sbjct: 26 TFNGGTIMAMAGDDYAIIASDTRLSEGFSIHTRDSPKNY-RLXVISIHICSDWPSLT--- 81
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
+ + R +YE + ++KMS + AM+S +LY RRF PY+ ++ GLD E +
Sbjct: 82 ----KVLTARLKMYEHEHHKKMSTTAIAAMLSTILYYRRFFPYYTYNILAGLD-EEGKGC 136
Query: 121 IGNMDLIGCVNQPSDFVVGGPCS-------DQLYGMCETLW--EPNLEPDDLFETIAQAL 171
+ + D +G + + G + +Q+ G + W EP + D +
Sbjct: 137 VYSFDPVGSYERETYRAAGSSSALLQPLLDNQIGGKNQEGWVKEP-IPVDKAVALVKDVF 195
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G G V++++ +D R D
Sbjct: 196 ISAAERDIYTGDGIVLHVLTKDGCKEERFPLRRD 229
>gi|134045918|ref|YP_001097404.1| proteasome subunit beta [Methanococcus maripaludis C5]
gi|302595749|sp|A4FYA5.1|PSB_METM5 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|132663543|gb|ABO35189.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanococcus maripaludis
C5]
Length = 219
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + K+ V +A DKR G +AD +K++++ ++ + + G D Q++ +
Sbjct: 14 GTTTVGLLCKDGVVLATDKR-ATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRI 72
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I +++++ M+P +ISN+L+ R P + ++ G D + ++D
Sbjct: 73 ISAEAKIHKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGAKLF-SLDP 131
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G +N+ S F G S YG+ E + ++ D +AL +A +R+A SG G
Sbjct: 132 VGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALSSAMQRDAYSGNGIS 191
Query: 187 VYIIEQDKVTV 197
+ I +D V +
Sbjct: 192 LAHINKDGVKL 202
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 97/197 (49%), Gaps = 3/197 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + K+ V +A +KR L+ +K+F V + + G+ D Q + + +
Sbjct: 8 GATAVGIRAKDGVVLAAEKRVSYGFYTLSTAGKKVFIVNDKLAIASAGIIADMQALAKIL 67
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ YEL+ +K + K + ++S +++ RRF P++ E +V G+D E I+ MD +
Sbjct: 68 KLNARSYELEVKKKPTVKAMAKLLSVVMFSRRFMPFYAEVLVGGVDEEGPHLIV--MDPL 125
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + ++ G + + + + P++ ++ + QA+ A ER+ VSG G +
Sbjct: 126 GSLIE-DNYAALGTGAKLAVSLLDASYRPDMTVEEAKKLAVQAVKAAIERDPVSGGGIDL 184
Query: 188 YIIEQDKVTVRHVKTRM 204
+++ VK ++
Sbjct: 185 VVVDGGGAREEEVKVQV 201
>gi|198424168|ref|XP_002121356.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 229
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
+NGG+I+A+ G + +A D R + K Q+ ++ + G D+ T+
Sbjct: 23 AFNGGNILAVAGGDFAVVASDTRLSQGFMIHTRDHPKAVQLTANTVLAQSGFEGDSLTLK 82
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ ++ R +YE + S + AMIS MLY +RF PY+V +V GLD E + + +
Sbjct: 83 KHVQMRIGMYEHNHGKTPSTSAIAAMISKMLYYKRFFPYYVYNIVAGLDNE-GKGCVYSY 141
Query: 125 DLIGCVNQPSDFVVGG------PCSDQLYGMCETLWE--PNLEPDDLFETIAQALVNACE 176
D +G + G P D G + + E P L + + ++A E
Sbjct: 142 DPVGSYEREQYRAAGAANELLQPLLDNQIGF-KNMSEAGPPLSKERAVQLCIDCFISAAE 200
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G ++ +I++D V + R D
Sbjct: 201 RDITTGDCVLIQVIDKDGVETKKFPLRRD 229
>gi|194872539|ref|XP_001973034.1| GG15866 [Drosophila erecta]
gi|190654817|gb|EDV52060.1| GG15866 [Drosophila erecta]
Length = 235
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G + IA D R + K+F++ +G G DT ++
Sbjct: 28 NGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSHQTVLGSTGCWADTLSLTGS 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R YE R M+ + + M+S +Y RRF PY+V ++ G+D E + ++ + D
Sbjct: 88 MKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNE-GKGVVYSYDP 146
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGMCE-TLWEPN---LEPDDLFETIAQALVNAC 175
IG + + + GG P D G L + + L + + ++A
Sbjct: 147 IGHCEKAT-YRAGGTAGTLLQPVLDNQIGHKNMNLADADKIKLTKERAVSVASDTFISAA 205
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++ II D + V+ + R D
Sbjct: 206 ERDIYTGDSVLINIITNDGIEVQTLPLRQD 235
>gi|157119738|ref|XP_001659482.1| proteasome subunit beta type [Aedes aegypti]
gi|108875198|gb|EAT39423.1| AAEL008770-PA [Aedes aegypti]
Length = 231
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS+VA+ G + I D R + K+F++ + G DT +
Sbjct: 26 NGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRMSDRTVLASTGCWCDTLALTSL 85
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +Y+ + + M+ + M+S ++Y RRF PY+V ++ GLD + + +I + D
Sbjct: 86 VKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDAD-GKGVIYSYDP 144
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGMCETLWEPNLEP-----DDLFETIAQALVNA 174
IG + + + GG P D G+ + N+ P D I ++A
Sbjct: 145 IGHCEKTT-YRAGGSAGPLLQPVLDNQIGLKNMV---NVAPTPVQLDKAISIIKDTFISA 200
Query: 175 CERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++ II +D + V+ R D
Sbjct: 201 TERDIYTGDSVIINIITKDGIKEEIVQLRKD 231
>gi|349805257|gb|AEQ18101.1| putative proteasome beta 1 subunit [Hymenochirus curtipes]
Length = 205
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
GG+++A+ G++ +A D R + + N K +++ +G G D T+ + I
Sbjct: 1 GGTVLALAGEDFAIVASDTRLSEGYSIHSRNTPKCYKLTDKTVIGCSGFHADCLTLTKII 60
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + + D +
Sbjct: 61 EARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGAVYSFDPV 119
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWE----PNLEP-----DDLFETIAQALVNACERN 178
G Q + GG S L + + PN E + + + ++A ER+
Sbjct: 120 GSY-QRDAYKAGGSASAMLQPLLDNQIGYKNMPNAEQVPLTLEKAIKLVKDVFISATERD 178
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G + I+ ++ + + R D
Sbjct: 179 VYTGDSLKISIVTKEGIREESLSLRKD 205
>gi|238606166|ref|XP_002396644.1| hypothetical protein MPER_03076 [Moniliophthora perniciosa FA553]
gi|215469594|gb|EEB97574.1| hypothetical protein MPER_03076 [Moniliophthora perniciosa FA553]
Length = 59
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
M YNGGS++AM GK+CVAIACD R G Q ++ NFQKIF V +Y+GLP ATD T+
Sbjct: 1 MEYNGGSVIAMVGKDCVAIACDLRLGNQALGISSNFQKIFPVSDRIYLGLPA-ATDVTTL 59
>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 204
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 3/194 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + K+ V +A +KR +L+ + +K++ V M + G+ D QT+ + +
Sbjct: 8 GATAVGIKAKDGVVLAAEKRITYGFYSLSSSGKKVYVVNDRMALASAGVIADMQTIAKIL 67
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
R +YEL+ RK S + ++S +++ RR P+ E +V G D E P I +D +
Sbjct: 68 RVNAKMYELESRRKPSIAAMAKLLSVIMFNRRIMPFIAEVLVGGYDEEG--PHIFVLDPV 125
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + D+ G + + + + +++ + A+ A ER+ VSG G +
Sbjct: 126 GSLIE-DDYAALGTGAKMAISILDANYSKDVDVSGARKLAINAIRAALERDPVSGGGIDL 184
Query: 188 YIIEQDKVTVRHVK 201
+ D V+ +K
Sbjct: 185 VTVTADGVSEEEIK 198
>gi|260799786|ref|XP_002594865.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
gi|229280102|gb|EEN50876.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
Length = 235
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S ++NGG+++A+ G++ +ACD R + L+ + K +++ +G G D
Sbjct: 24 FSPYSWNGGTVLAIAGEDYAVLACDARLSEYFSILSRDSPKRYKLTDMTVLGCCGFHGDV 83
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + + R Y+ + N+ MS K + AM+S +LY RRF PY+ ++ GLD E +
Sbjct: 84 LTLTKMLDARLKNYKHEHNKTMSCKSIAAMLSTVLYYRRFFPYYTYNILAGLD-EEGKGC 142
Query: 121 IGNMDLIGCVNQPSDFVVGG-------PCSDQLYGM--CETLWEPNLEPDDLFETIAQAL 171
+ + D IG + + GG P D GM + + + + +
Sbjct: 143 VYSFDPIGSYEREV-YRAGGSASALLQPLLDNQIGMKNMQGVQRLPVPKEKAVALVKDVF 201
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G ++ +I +D + R D
Sbjct: 202 ISAAERDIYTGDQIIINVITKDGIQEESFPLRRD 235
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 101/198 (51%), Gaps = 5/198 (2%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATD 59
M +M G + V + + V +A DKR + G +AD +K++++ ++ + + G D
Sbjct: 1 MDVM--KGTTTVGLICDDAVILATDKRASM-GNLVADKEAKKLYKIDDYIALTIAGSVGD 57
Query: 60 TQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
Q + + + LY+++ + +SP ++SN+L+ R+ P+ + ++ G D
Sbjct: 58 AQAIVRLLTAEAKLYKMRTGKNISPLACATLLSNILHSNRYFPFLTQLIIGGYDLLEGAK 117
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
+ ++D +G +N+ F G S YG+ E ++ ++ ++ + +AL +A ER+
Sbjct: 118 LF-SLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMPVEEGIKLALKALKSAMERDT 176
Query: 180 VSGWGAVVYIIEQDKVTV 197
SG G + +I ++ V +
Sbjct: 177 YSGNGISLAVITKEGVKI 194
>gi|435851174|ref|YP_007312760.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433661804|gb|AGB49230.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 210
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 10/189 (5%)
Query: 14 MTGKNCVAIACDK-------RFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQ 65
+ G V I CDK R G +A +KI+Q+ + + G D Q + +
Sbjct: 7 LKGTTTVGIVCDKGVVLATERRATMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIVR 66
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ +LY+++ M+ K + ++SN+L +R+ P V+ +V G+D P I ++D
Sbjct: 67 VMSVESHLYKMRRKEPMTIKGITTLLSNILSGQRYYPLMVQLLVGGVDKNG--PAIFSLD 124
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G + + V G S YG+ E + L ++ E +AL NA +R++ SG G
Sbjct: 125 ALGGTIEETKAVATGSGSPMAYGVLEDRFVDGLSIEEGVELAIRALHNAMKRDSASGNGI 184
Query: 186 VVYIIEQDK 194
V +I DK
Sbjct: 185 DVVVITADK 193
>gi|156095478|ref|XP_001613774.1| proteasome subunit beta type 1 [Plasmodium vivax Sal-1]
gi|148802648|gb|EDL44047.1| proteasome subunit beta type 1, putative [Plasmodium vivax]
Length = 241
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 100/206 (48%), Gaps = 8/206 (3%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++ +TGK+ V +A D R + + + KI ++ +G G+ +D +T++
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ + L+ L+ V+ ++ +LY RRF PY+ ++ G+ + ++ ++ N D
Sbjct: 97 LKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSND-SKGVLYNYDA 155
Query: 127 IGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
IG + + VG + +++ + + N D + + A+ +A ER+
Sbjct: 156 IGSYCEATHSCVGSGSALILPILDNRMEQKNQLIKNLNFNLRDDLDFVKDAITSATERDI 215
Query: 180 VSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G +YII+Q V ++ + D
Sbjct: 216 YTGDSTEIYIIDQMGVNTTSLELKQD 241
>gi|290986448|ref|XP_002675936.1| predicted protein [Naegleria gruberi]
gi|284089535|gb|EFC43192.1| predicted protein [Naegleria gruberi]
Length = 223
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 9/207 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ +A+ G + V +A D R + + K+ ++ + G+ +D T+++
Sbjct: 18 NGGTTLAIPGPDYVIVAADTRMSLGYSIQTRKSTKLCKLTDKCVIASAGMQSDAATLHKV 77
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R YE + + MS + M+SNMLY RRF PY+ +V GLD + + I+ + D
Sbjct: 78 LKMRLVEYEHQHGKPMSVVAVGQMLSNMLYNRRFFPYYTFNLVAGLDTD-GKGIVFSYDA 136
Query: 127 IGCV------NQPSDFVVGGPCSDQLYGMCETLWEPN--LEPDDLFETIAQALVNACERN 178
IG +Q S + P D L PN L + + A +A ER+
Sbjct: 137 IGSYQSVEVGSQGSGQTLIQPLLDNQVAFKNHLLVPNTDLTLEQSLSIVKDAFTSAGERD 196
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G + II ++ + ++ + D
Sbjct: 197 IYTGDSVEILIITKEGIKTEILELKKD 223
>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + K+ V +A D+R + L+ K+FQ+ H+ + G D ++ +
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSKEVTKVFQIDDHLALAGAGSVGDILSLVRL 65
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R LY K R++S K L + SN+L+ RF PYF ++ G D +P + ++D+
Sbjct: 66 LRAEVKLYRAKVGREISVKALATLTSNILHGSRFMPYFGWFLIAGYDE---KPALYSLDM 122
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + F G + + + E ++ ++ ++ + +A+ A R+ +G G
Sbjct: 123 AGGVTEDK-FTAAGSGMELAFAVLEDGYKDDINVEEGVKLALKAIKIATRRDVFTGDGIT 181
Query: 187 VYIIEQD 193
+ + ++
Sbjct: 182 LVTVTEE 188
>gi|51468069|ref|NP_001003889.1| proteasome subunit beta type-1 [Danio rerio]
gi|49619079|gb|AAT68124.1| proteasome beta-subunit C5 [Danio rerio]
gi|55715844|gb|AAH85580.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Danio rerio]
gi|182891728|gb|AAI65077.1| Psmb1 protein [Danio rerio]
Length = 237
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E
Sbjct: 86 LTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GRGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L + + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMENVEHVPLTQEKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G V I+ ++ + V R D
Sbjct: 204 ISAAERDVYTGDALKVCIVSKEGIKEEIVPLRKD 237
>gi|209734840|gb|ACI68289.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S ++NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAVVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 86 LTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L + + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + R D
Sbjct: 204 ISAAERDVYTGDALRICIVTKDGIKEETFPLRKD 237
>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
gi|340623725|ref|YP_004742178.1| proteasome subunit beta [Methanococcus maripaludis X1]
gi|74555067|sp|Q6LZD4.1|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
gi|339903993|gb|AEK19435.1| proteasome subunit beta [Methanococcus maripaludis X1]
Length = 219
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 95/191 (49%), Gaps = 3/191 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V +A DKR G +AD +K++++ ++ + + G D Q++ +
Sbjct: 14 GTTTVGLLCNDGVVLATDKR-ATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRL 72
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I +Y+++ M+P +ISN+L+ R P + ++ G D + ++D
Sbjct: 73 ISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGAKLF-SLDP 131
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G +N+ S F G S YG+ E+ ++ ++ + +AL +A +R+A SG G
Sbjct: 132 VGGINEESSFTATGSGSPTAYGVLESEYKSDIAIEKGLLIAVKALSSAMQRDAYSGNGIS 191
Query: 187 VYIIEQDKVTV 197
+ I +D V +
Sbjct: 192 LAHINKDGVKL 202
>gi|197129775|gb|ACH46273.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S T+NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 27 FSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDC 86
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I +Y+ + M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 87 LTLTKIIEAGGEMYKHSNFKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGA 145
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G + +F GG S L + + + L + + +
Sbjct: 146 VYSFDPVGSYER-DNFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKDVF 204
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + + ++ R D
Sbjct: 205 ISAAERDVYTGDALKICIVTKDGIKEQSIQLRKD 238
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 95/192 (49%), Gaps = 3/192 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQ 65
G + V + + V +A DKR + G +AD +K++++ ++ + + G D Q + +
Sbjct: 5 KGTTTVGLICDDAVILATDKRASL-GNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVR 63
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ LY+++ R + P ++SN+L+ R P+ + ++ G D + ++D
Sbjct: 64 LLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLF-SLD 122
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G +N+ F G S YG+ E ++ ++ ++ + AL +A ER+ SG G
Sbjct: 123 PLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGI 182
Query: 186 VVYIIEQDKVTV 197
+ +I +D V +
Sbjct: 183 SLAVITKDGVKI 194
>gi|72537676|gb|AAZ73764.1| 20S proteasome beta subunit [Cirrhinus molitorella]
Length = 237
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GRGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + E L + + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAMLQPLLDNQIGFKNMENVEEVPLTLEKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + II ++ + V R D
Sbjct: 204 ISAAERDVYTGDALEICIITKEGIREEIVPLRKD 237
>gi|409095355|ref|ZP_11215379.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 206
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 4/187 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + ++ V +A DKR + + KIFQ+ H+ + GL D ++ +
Sbjct: 9 KGTTTVGLICRDGVILAADKRATMGNMITSKEVTKIFQIDDHLAIAGAGLVGDILSMVRL 68
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R LY + R+MS KVL +I+N+L+ R YF +V G D EP + ++D
Sbjct: 69 LRAEARLYRARVGREMSVKVLTTLIANILHGGRGYGYFAWFLVGGYDT---EPRLYSIDA 125
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + +V G + + E + L +D A+A+ A +R+ +G G
Sbjct: 126 AGGVTEEK-YVAAGSGMEFALAILENEFSEGLSLEDGMRLAAKAVNAAIKRDVYTGEGIT 184
Query: 187 VYIIEQD 193
+ ++ ++
Sbjct: 185 LVVVTKE 191
>gi|170035625|ref|XP_001845669.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
gi|167877642|gb|EDS41025.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
Length = 231
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS+VA+ G + I D R + K+F++ + G DT +
Sbjct: 26 NGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRLSEGTVLASTGCWCDTLALTSL 85
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +Y+ + + M+ + M+S ++Y RRF PY+V ++ GLD E ++ + D
Sbjct: 86 VKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDEE-GRGVVYSYDP 144
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGMCETLWEPNLEPDDLFETIA---QALVNACE 176
IG + + + GG P D G+ + + + EP L + ++ ++A E
Sbjct: 145 IGHCEKTT-YRAGGSAGPLLQPVLDNQIGL-KNMVGASTEPVQLAKAVSIIKDTFISATE 202
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G ++ II +D + V+ R D
Sbjct: 203 RDIYTGDSVIINIITKDGIKEEVVQLRKD 231
>gi|298711428|emb|CBJ32569.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 251
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 10/208 (4%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+ +A+ G + V +A D R + ++ + K+ Q+ S + G TD T+++
Sbjct: 46 FNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWK 105
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
++ +Y+ ++M+ + M++N LY RRF PY+ ++ GLD E + + + D
Sbjct: 106 ELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLD-EQGKGSVFSYD 164
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWE--------PNLEPDDLFETIAQALVNACER 177
IG + + G + + + L E P + E + + LV A ER
Sbjct: 165 AIGSFERVP-YSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELLVTAGER 223
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G + II +D + + + D
Sbjct: 224 DIYTGDAVEITIISKDGTSTQMFPLKKD 251
>gi|302810458|ref|XP_002986920.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
gi|300145325|gb|EFJ12002.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
Length = 226
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L K+F++ + G D +T+ +
Sbjct: 17 NGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMASSGFQADVRTLQKN 76
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ RQ Y + + MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 77 LEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCVYTYDAV 136
Query: 122 GNMDLIGCVNQPSDFVVGGPCSD-QLYGMCETLWEPN-----LEPDDLFETIAQALVNAC 175
G+ + G Q S + P D QL L+ P L + E + +A
Sbjct: 137 GSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPPRETATPLTEQEALEIVKDTFASAT 196
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER +G G + +I +D + ++ + D
Sbjct: 197 ERQIYTGDGLEIVVINKDGIHKEYLDLKKD 226
>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex protein [Methanococcus aeolicus
Nankai-3]
gi|302595768|sp|A6UT20.1|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
Length = 217
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 97/191 (50%), Gaps = 3/191 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + + +A DKR G +AD +K++++ +M + + G D Q++ +
Sbjct: 14 GTTTVGIVCNDGIVLATDKR-ATMGNLIADKEAKKLYKIDDYMAMTIAGSVGDAQSLVRI 72
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I NLY+L+ + P ++SN+L+ R P+ ++ ++ G D + ++D
Sbjct: 73 ISAEANLYKLRTGNNIPPHSCAMLLSNVLHGSRHFPFLIQLIIGGYDTIHGAKLF-SLDA 131
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G +N+ + F G S +G+ E ++ ++ + ++L A +R+A SG G
Sbjct: 132 VGGLNEETSFTATGSGSPTAFGVLEEEYKKDMTINKGKLLAIKSLTAAMKRDAFSGNGIS 191
Query: 187 VYIIEQDKVTV 197
+ +I+++ V +
Sbjct: 192 LAVIDKNGVKI 202
>gi|240103778|ref|YP_002960087.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595756|sp|C5A7L1.1|PSB1_THEGJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|239911332|gb|ACS34223.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 201
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 4/187 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + ++ V +A D+R + + K+FQ+ H+ + GL D ++ +
Sbjct: 9 KGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQIDDHLAIAGAGLVGDILSLVRL 68
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R LY K R+MS K L ++SN+L+ R PYF ++ G D +P + ++D
Sbjct: 69 LRAEAKLYRAKVGREMSVKALATLVSNVLHGSRHLPYFAWFLIGGYD---VKPRLYSIDA 125
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + F+ G + + E + + D+ + +A+ A R+ +G G
Sbjct: 126 AGGVTEER-FIAAGSGMEFALALLEENFSDGMGLDEGIDLAVRAVKAAIRRDVYTGEGVT 184
Query: 187 VYIIEQD 193
V I ++
Sbjct: 185 VVAITKE 191
>gi|448488453|ref|ZP_21607289.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
gi|445696143|gb|ELZ48236.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
Length = 243
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V +A D R + G + + QK+ ++ + + G + Q +
Sbjct: 48 TGTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R +LYE + + MS + L + N+L F Y V+P++ G+D E A I ++D
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGAH--IYSIDA 163
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + ++ V G S G+ E ++ ++ D+ A+A+ +A ER+ SG G
Sbjct: 164 LGGTTE-EEYTVTGSGSQYALGVLEQEYDDDVTIDEAKNIAAKAIQSAVERDLASGNGIN 222
Query: 187 VYIIEQDKVTVRHVK 201
V ++ D V + K
Sbjct: 223 VAVVTDDGVDITRYK 237
>gi|443688987|gb|ELT91509.1| hypothetical protein CAPTEDRAFT_172055 [Capitella teleta]
Length = 229
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
++NGGSI+A+ G + +A D R + + N K +++ + G D T
Sbjct: 22 SFNGGSIMAIAGDDFAVVASDTRLSEGFSIHSRNAPKTYKLTDKTVLASAGFHGDVLTEI 81
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ + R +YE + +KMS + + AM++ +LY +RF PY+V ++ GLD E + + +
Sbjct: 82 KVLEARLKMYEHEHGKKMSSQAIAAMLATILYHKRFFPYYVYNIIGGLD-EEGKGCVYSY 140
Query: 125 DLIGCVNQPSDFVVGG-------PCSDQLYGMC--ETLWEPNLEPDDLFETIAQALVNAC 175
D +G + + GG P D G + + + +L D + I ++A
Sbjct: 141 DPVGSYEREV-YRAGGSAGPLLQPLLDNQIGFKNQQGVEKVSLSKDKAIKLIKDIFISAA 199
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + ++ ++ V+ R D
Sbjct: 200 ERDIYTGDSLHLKVVTKEGVSEETFPLRRD 229
>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
gi|302595790|sp|A6USJ3.1|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 219
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 96/191 (50%), Gaps = 3/191 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + ++ V +A DKR G +AD +K++++ ++ + + G D Q++ +
Sbjct: 14 GTTTVGLICEDGVVLATDKR-ATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRL 72
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ +Y+++ M+P + SN+L+ R P + ++ G D P + ++D
Sbjct: 73 LSAEAKIYKMRTGNNMTPLSCTTLTSNVLHGNRHYPLLTQLIIGGYDLING-PKLFSLDP 131
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G +N+ S F G S YG+ E ++ + + +AL++A +R+A SG G
Sbjct: 132 VGGINEESSFTATGSGSPTAYGVLEAEYKSEINIEKGLLIAVKALISAMQRDAYSGNGIS 191
Query: 187 VYIIEQDKVTV 197
+ I++ VT+
Sbjct: 192 LAKIDKTGVTL 202
>gi|386002905|ref|YP_005921204.1| proteasome subunit beta [Methanosaeta harundinacea 6Ac]
gi|357210961|gb|AET65581.1| Proteasome subunit beta [Methanosaeta harundinacea 6Ac]
Length = 179
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Query: 40 QKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERR 99
QKI+Q+ + + G+ D Q++ + I+ LY ++ M+ + +++SN+L RR
Sbjct: 11 QKIYQIADRVGLTTAGVVGDAQSLVRMIQVESKLYNMQRGEPMTVRGTTSLLSNVLASRR 70
Query: 100 FGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLE 159
+ P+ V+ ++ G+D + P + ++D +G Q V G S YG+ E L++P +
Sbjct: 71 YFPFMVQLLLGGVDKKG--PQLFSLDALGGSIQEQKVVATGSGSPTAYGVLEALYDPEMT 128
Query: 160 PDDLFETIAQALVNACERNAVSG 182
++ + +A+ NA +R++ SG
Sbjct: 129 VEEGMKLGVRAIHNAMKRDSASG 151
>gi|307107838|gb|EFN56080.1| hypothetical protein CHLNCDRAFT_22624 [Chlorella variabilis]
Length = 239
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG++VA+ G + +A R + L N KI Q+ + G+ D +T+++
Sbjct: 30 NGGTVVAVAGDDYCVVAASTRMSTGYSILTRNKSKILQLNPKCVIASAGMQADQETLHKV 89
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R Y+ + M+ + ++SN LY +RF PY+ + GLD E + I
Sbjct: 90 LHSRHVTYQFNHRKPMACPAMAQLLSNTLYYKRFFPYYTFNLCAGLDDEGRGAVYTYDAI 149
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETL------WEPNLEPDDLFETIAQALVNAC 175
G+ + +G Q + + P D L W +L + + + A V+A
Sbjct: 150 GSYERVGYGCQGNGKELVQPVLDNQLKAASPLALPPQQWLSSLPLEQAVDLVKGAFVSAG 209
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + II +D + ++ + D
Sbjct: 210 ERDIYTGDDVEILIITKDCIKTDRLELKRD 239
>gi|448456459|ref|ZP_21595228.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
gi|445811935|gb|EMA61932.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
Length = 243
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 5/195 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V +A D R + G + + QK+ +V + + G + Q +
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLIST 107
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ +LYE + + MS + L + N+L F Y V+P++ G+D E A I ++D
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGAH--IYSIDA 163
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + ++ V G S G+ E + + D+ E A+A+ +A ER+ SG G
Sbjct: 164 LGGTTE-EEYTVTGSGSQYALGVLEQEYHDEVTVDEATEIAAKAIQSAVERDLASGNGIN 222
Query: 187 VYIIEQDKVTVRHVK 201
V ++ D V + K
Sbjct: 223 VAVVTDDGVDITRYK 237
>gi|344229599|gb|EGV61484.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 242
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+++ + GK+ +A D R ++G ++ ++ KIF VG + + G A D + +
Sbjct: 28 NGGTVLGIAGKDFAVLAGDTRH-VEGYSINSRYEPKIFNVGDDIVMTANGFAADGKALIN 86
Query: 66 KIRFRQNLYELKEN-RKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ + Y+ N ++ S + I ++LY +RF PY+V ++ GLD E + + +
Sbjct: 87 SFKTQLKWYKFDHNDKRFSIQSAARYIRHLLYGKRFFPYYVSTLIAGLDDE-GKGCVYSF 145
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCE------TLWEPN-----------LEPDDLFETI 167
D +G + GG S + + +EP+ LE D++ E +
Sbjct: 146 DPVGSYER-EQCRAGGSASSLIMPFLDNQVNFKNQYEPDSDGKVKKPLRYLELDEVLELV 204
Query: 168 AQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A +A ER+ G G ++I+ ++ V V + + D
Sbjct: 205 KDAFSSATERHIQVGDGLEIHIVTKEGVRVEYFPLKRD 242
>gi|429329412|gb|AFZ81171.1| proteasome subunit beta type 1, putative [Babesia equi]
Length = 218
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 10/193 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG++VA T KN IA D R I N K+ ++ +G G+ D ++
Sbjct: 14 NGGTVVAATWKNYAVIAADTRLSIGYAIHTRNVSKMIKLTDTCILGTSGMQADMLALHSA 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + LY ++ S + ++S +LY RRF PY+ ++ G+D E ++ + D
Sbjct: 74 MERQVELYRFTHHKTPSFGAIAQLLSTILYSRRFFPYYTFNILCGID-ENGNGVVCSYDA 132
Query: 127 IGCVNQPSDFVVGGPCSDQLYGM--CET-----LWEPNLEP-DDLFETIAQALVNACERN 178
IG N + G S + + C+ L +P ++ +DL I AL +A ER+
Sbjct: 133 IGNYNYEK-YAAQGTSSSLITSIFDCQINGNNCLVKPEIKSLEDLVNIIKNALASAVERD 191
Query: 179 AVSGWGAVVYIIE 191
+G A V I +
Sbjct: 192 IYTGDSAQVVICD 204
>gi|448503545|ref|ZP_21613174.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
gi|445691746|gb|ELZ43929.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
Length = 243
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + ++ V +A D R + G + + QK+ ++ + + G + Q +
Sbjct: 48 TGTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMD 125
+R +LYE + ++ MS + L + N+L R G +F V+P++ G+D E A I ++D
Sbjct: 108 LRAETSLYEARRSKDMSMEALSTLTGNLL---RSGAFFVVQPILGGVDDEGAH--IYSID 162
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G + ++ V G S G+ E ++ + D+ A+A+ +A ER+ SG G
Sbjct: 163 ALGGTTE-EEYTVTGSGSQYALGVLEQEYDDEVSIDEAKTIAAKAIQSAVERDLASGNGI 221
Query: 186 VVYIIEQDKVTVRHVK 201
V ++ D V + K
Sbjct: 222 NVAVVTDDGVDITRYK 237
>gi|156365620|ref|XP_001626742.1| predicted protein [Nematostella vectensis]
gi|156213630|gb|EDO34642.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A++G++ IA D R + K++++ +G G D
Sbjct: 18 FSPYAFNGGTVLAISGEDFAVIASDTRLSQGFQIHTRDSPKVYKLTGSTVLGCSGFHGDC 77
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +YE + MS + M+S MLY RRF PY+ ++ GLD E +
Sbjct: 78 LTLTKHISARLQMYEHDHGKAMSCTAIAQMLSTMLYYRRFFPYYTYNILAGLDSE-GKGC 136
Query: 121 IGNMDLIGCVNQPSDFVVGG-------PCSDQLYGMCETLWEPN--LEPDDLFETIAQAL 171
+ + D +G + + GG P D G P+ L D +
Sbjct: 137 VFSFDPVGSYEREV-YRAGGSASALLQPLLDNQIGFKNQEGVPHTPLTRDKAVALVKDVF 195
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ +G ++ ++ + V+ R D
Sbjct: 196 TSAAERDIYTGDAVIINVVSSEGVSEEAFPLRRD 229
>gi|209881526|ref|XP_002142201.1| proteasome subunit beta type 1 [Cryptosporidium muris RN66]
gi|209557807|gb|EEA07852.1| proteasome subunit beta type 1, putative [Cryptosporidium muris
RN66]
Length = 245
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTV 63
T NGGS +A+ G + I D R QG +A + ++F++ + + G+ D +
Sbjct: 39 TDNGGSCIALAGSDFAVIVSDTRLS-QGYRIASRSVTRVFEITAKCVLSCSGMFADITAL 97
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+ IR R +YE + + S + ++S +LY +RF PY+ + GLD E +
Sbjct: 98 QKLIRARVKIYEFEHKKSPSIGAVAQLLSTVLYSKRFFPYYCYCAIAGLD-EYGNGVAYG 156
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN--LEPD------DLFETIAQALVNAC 175
D +G Q + G S + + + N L P D+ + + A+ +A
Sbjct: 157 YDAVGSF-QSGKYFANGTGSHLISSILDNQISGNNQLYPKILTNKVDMIDLLKDAITSAS 215
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G A V +I+ +++ R D
Sbjct: 216 ERDVYTGDSAQVVVIDASGISISSFPLRQD 245
>gi|296004560|ref|XP_002808699.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
gi|225631686|emb|CAX63970.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
Length = 240
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 100/206 (48%), Gaps = 8/206 (3%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++ +TGK+ V +A D R + + KI ++ +G G+ +D +T++
Sbjct: 36 NGGTVIGLTGKDYVILAADTRLSLSYSIYTRFCPKISKLTDKCIIGSSGMQSDIKTLHSL 95
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ + L+ L+ + V+ ++ +LY RRF PY+ ++ G+D E + ++ N D
Sbjct: 96 LQKKIQLFVLEHSHYPDIHVIARLLCVILYSRRFFPYYAFNILAGVD-ENNKGVLYNYDS 154
Query: 127 IGCVNQPSDFVVGG------PCSD-QLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
+G + + VG P D ++ + + N D + A+ +A ER+
Sbjct: 155 VGSYCEATHSCVGSGSQLILPILDNRVEQKNQLIKNTNFNLGDDINFVKDAITSATERDI 214
Query: 180 VSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G ++Y+I++ + V + + D
Sbjct: 215 YTGDKTLIYVIDKMGINVNTLDLKQD 240
>gi|225703310|gb|ACO07501.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S ++NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGSHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E +
Sbjct: 86 LTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEE-GKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L + + +
Sbjct: 145 VYSFDPVGPY-QRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ +D + V R D
Sbjct: 204 ISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237
>gi|448530967|ref|ZP_21620801.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
gi|445707407|gb|ELZ59261.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
Length = 243
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + ++ V +A D R + G + + QK+ ++ + + G + Q +
Sbjct: 48 TGTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R +LYE + + MS + L + N+L F Y V+P++ G+D E A I ++D
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGAH--IYSIDA 163
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + ++ V G S G+ E ++ + D+ A+A+ +A ER+ SG G
Sbjct: 164 LGGTTE-EEYTVTGSGSQYALGVLEQEYDDGVTIDEAKTIAAKAIQSAVERDLASGNGIN 222
Query: 187 VYIIEQDKVTVRHVK 201
V ++ D V + K
Sbjct: 223 VAVVTDDGVDITRYK 237
>gi|448435232|ref|ZP_21586709.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
gi|445684056|gb|ELZ36442.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
Length = 243
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + ++ V +A D R + G + + QK+ ++ + + G + Q +
Sbjct: 48 TGTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R +LYE + + MS + L + N+L F Y V+P++ G+D E A I ++D
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGAH--IYSIDA 163
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + ++ V G S G+ E ++ + D+ A+A+ +A ER+ SG G
Sbjct: 164 LGGTTE-EEYTVTGSGSQYALGVLEQEYDDGVTIDEAKTIAAKAIQSAVERDLASGNGIN 222
Query: 187 VYIIEQDKVTVRHVK 201
V ++ D V + K
Sbjct: 223 VAVVTDDGVDITRYK 237
>gi|350525853|ref|YP_002582771.2| proteasome subunit beta [Thermococcus sp. AM4]
gi|345650672|gb|EEB74119.2| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 194
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 4/187 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + ++ V +A D+R + + K+FQV H+ + GL D ++ +
Sbjct: 2 KGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQVDDHLAIAGAGLVGDILSLVRL 61
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R LY + R+MS K + ++SN+L+ R+ PYF ++ G D P + ++D
Sbjct: 62 LRAEAKLYRARVGREMSVKAMATLVSNVLHGSRYLPYFAWFLIGGYD---VRPRLYSIDA 118
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + F+ G + + E + ++ ++ + +A+ A R+ +G G
Sbjct: 119 AGGVTEER-FIAAGSGMEFALALLEENFSDGMDLEEGVDLAVRAVKAAMRRDVYTGEGVT 177
Query: 187 VYIIEQD 193
V I ++
Sbjct: 178 VVTITKE 184
>gi|198463833|ref|XP_002135596.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
gi|198151431|gb|EDY74223.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
Length = 216
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A+ GK+ V I D R L+ K+ + M V G D ++
Sbjct: 13 NGGTVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAATGCGCDAVSLTNL 72
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ +Q YE + ++ MS + + M+S + Y+RR PY V P++ G+D + + + + D
Sbjct: 73 LKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPILGGIDQD-GQGAVFSYDC 131
Query: 127 IGCVNQPSDFVVGG------PCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
IG + S V G P D G ET +P L + A + A + +
Sbjct: 132 IGHFVRESSRVEGTAVGILQPVLDNQIG--ETSEQPALTKERALAIAKDAFITAAQSDMF 189
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+G ++ +I +D + V ++ D
Sbjct: 190 TGDSVIINVITKDSIKVEKMQLGKD 214
>gi|255076203|ref|XP_002501776.1| predicted protein [Micromonas sp. RCC299]
gi|226517040|gb|ACO63034.1| predicted protein [Micromonas sp. RCC299]
Length = 229
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A+ G++ V A D R L +++KI Q+ + G D T+ +
Sbjct: 20 NGGTVLAVAGEDYVVCAADTRMSTGYNILTRDYKKIDQMSDKCVLASAGFMADAVTLKKT 79
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R YE + ++ M M+SN LY RRF PY+ +V GLD E + + D
Sbjct: 80 LKARCTTYEFQNDKPMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDAE-GKGAVFTYDA 138
Query: 127 IGCVNQPSDFVVGG------PCSD-QLYGMCETLWEPNLEPDDLFETIAQALVNAC---- 175
+G + + G P D QL + + L E+ A LV C
Sbjct: 139 VGSYERTNYSCQGSGQGLIMPVLDNQLKTVSPLVLPAQSSATPLSESEAVDLVKDCFATA 198
Query: 176 -ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++II +D V + + ++D
Sbjct: 199 GERDIYTGDTVEIWIINKDGVRKEYQELKLD 229
>gi|213401303|ref|XP_002171424.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
gi|211999471|gb|EEB05131.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
Length = 193
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+IV + G++ IA D R + G + F ++ +VG + +G G D T+ +
Sbjct: 12 NGGTIVGIAGEDFSIIAGDTR-NVNGYNINTRFSPRVHEVGDKLILGATGFEADALTLVK 70
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
+IR R +LY R MSP M+ MLY +RF PY+V +V GLD +
Sbjct: 71 RIRQRIDLYHDNHKRIMSPSSCSRMVQTMLYGKRFFPYYVYTLVAGLDEK 120
>gi|225705308|gb|ACO08500.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 236
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S ++NGG+++A+ G++ +A D R + + + K +++ + +G G D
Sbjct: 25 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVIGCSGFHGDC 84
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + A +S +LY RRF PY+V ++ GLD E +
Sbjct: 85 LTLTKIIDARLKMYKHSNNKSMTSGAIAATLSTILYGRRFFPYYVYNIIGGLDEE-GKGA 143
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L + + +
Sbjct: 144 VYSFDPVGSY-QRGTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLNQEKAVQLVKDVF 202
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ +G + I+ ++ + V R D
Sbjct: 203 ISAAERDVYTGDALRICIVTKEGIKEETVPLRKD 236
>gi|308159821|gb|EFO62339.1| Proteasome subunit beta type 1 [Giardia lamblia P15]
Length = 214
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T NGG+I+A+ G + IA D R L+ N +K+F V + G+ D Q +
Sbjct: 12 TDNGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLI 71
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ ++ Y LK ++++ + + ++S M+Y RR P++ +V G+D E + + +
Sbjct: 72 KHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSE-GKGAVYSY 130
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDD-------LFETIAQALVNACER 177
D+IG + G +C L E L ++ FE I A + ER
Sbjct: 131 DVIGSTLRTR----YGSAGTGNAMICPILDEAILSKNEAEITREFAFELIQSAFRSCAER 186
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G V I D + R + R D
Sbjct: 187 DIYTGDSVVAMCISADGIQERTFELRKD 214
>gi|257075968|ref|ZP_05570329.1| proteasome beta subunit [Ferroplasma acidarmanus fer1]
Length = 210
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + + +T + V + D R + N QK++++ ++ + + GL D Q + + +
Sbjct: 7 GTTTLGITAGDYVIMGTDSRATMGNFISNKNAQKLYKIDTYAGMTIAGLVGDAQVLVRYM 66
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
R LY ++ M + ++SNML + ++ PY V+ +V G D +P I ++D
Sbjct: 67 RAEMELYRVQRKINMPIEAAATLLSNMLNQSKYYPYMVQLLVGGFDK---KPHIFSIDAA 123
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + ++ G S +YG+ E ++PN++ DD +A+ A +R++ SG +
Sbjct: 124 GG-SVEDEYASTGSGSPFVYGVLEAEYQPNMKLDDAINLAIKAISVAKQRDSASGNMLQI 182
Query: 188 YIIEQDK 194
+I+ +K
Sbjct: 183 GVIDPEK 189
>gi|397607048|gb|EJK59530.1| hypothetical protein THAOC_20230, partial [Thalassiosira
oceanica]
Length = 61
Score = 73.6 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
MSI+ YNG +I+AM GK+CVAIA D R GI +A +F+K+F++ + VGL GLATD
Sbjct: 1 MSILEYNGAAIIAMAGKDCVAIASDNRLGISYQTVAMDFKKVFKMNDRLMVGLAGLATDV 60
Query: 61 Q 61
Q
Sbjct: 61 Q 61
>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
gi|302595755|sp|D3E0A3.1|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
Length = 207
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 95/189 (50%), Gaps = 6/189 (3%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T+ G + V +T K+ V A ++R + +KIF++ +H+ + G D QT+
Sbjct: 6 TFEGTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKIDNHIAATIAGSVADAQTLM 65
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ I +LY L+ + +S + A+ SN+L+ P +V+ ++ G+D A I ++
Sbjct: 66 KVISAETSLYRLRNGKDISLEAAAAVSSNILHSS---PAYVQTLIGGVDDTGAS--IYSL 120
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + + + F+ G S YG+ E + ++ ++ E +A+ A ER+ SG G
Sbjct: 121 DAAGGMIKDT-FISTGSGSTFAYGVLEDRFYEDITVEEATEVAIRAIKAATERDTFSGNG 179
Query: 185 AVVYIIEQD 193
+V + +D
Sbjct: 180 FLVANVTKD 188
>gi|395645475|ref|ZP_10433335.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
gi|395442215|gb|EJG06972.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
Length = 212
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 96/195 (49%), Gaps = 2/195 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + +A +KR + + +K++Q+ + + G D Q++ +
Sbjct: 10 KGTTTVGLVFDEGIVLATEKRATMGTLIASKTAKKVYQIADRIGMTTAGGVGDAQSLARL 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ +LY+++ + +S ++SN L + R+ PY+V+ +V G+D P + ++D
Sbjct: 70 MQVECSLYKVRHGKPISVGAAATLLSNYLQQNRYYPYYVQLLVGGVDRNG--PSVYSVDA 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G ++ +D V G S YG+ E + ++ + + ++L A R++ SG
Sbjct: 128 MGGASKETDIVSTGSGSPMAYGVLEDRYHADMNEPEAVDLATRSLKAAMRRDSASGENIS 187
Query: 187 VYIIEQDKVTVRHVK 201
+ +I +DK + V+
Sbjct: 188 IVVITRDKYEEKAVQ 202
>gi|374636366|ref|ZP_09707939.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
gi|373559248|gb|EHP85553.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
Length = 220
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 95/192 (49%), Gaps = 3/192 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQ 65
G + V + + V +A DKR G +AD +K++++ ++ + + G D Q + +
Sbjct: 9 KGTTTVGLICDDAVVLATDKR-ATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVR 67
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ LY+++ + + P ++SN+L+ R P+ + ++ G D P + ++D
Sbjct: 68 YVSAEAKLYKMRTGKNIPPLSCATLMSNILHGSRMFPFLTQLIIGGYDFLYG-PRLFSLD 126
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G +N+ S F G S YG+ E + ++ D +AL++A ER+A SG G
Sbjct: 127 PVGGLNEESYFTATGSGSPTAYGVLELEYSRDMLLKDGLNLSVKALMSAMERDAFSGNGI 186
Query: 186 VVYIIEQDKVTV 197
+ + ++ V +
Sbjct: 187 SLAYVNKEGVKI 198
>gi|229366584|gb|ACQ58272.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
T+ + I R +Y+ N+ M+ + AM+S +LY R F PY+V ++ GLD E +
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRGFFPYYVYNIIGGLD-EHGKGA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQAL 171
+ + D +G Q + GG S L + E + L D + +
Sbjct: 145 VYSFDPVGSY-QRDTYKAGGSASAVLQPLLDNQIGFKNMEGVQHVPLTQDKAVQLVKDVF 203
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
++A ER+ G V II ++ ++ + V R D
Sbjct: 204 ISAAERDVYIGDALRVCIITKEGISEQTVPLRKD 237
>gi|255541320|ref|XP_002511724.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223548904|gb|EEF50393.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 223
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VA+ G + IA D R L ++ KI Q+ + G D Q + +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICQLAEKSVMASSGFQADVQALQKH 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
++ + +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LKAKHLIYQHQHNKQMSCPAMGQLLSNTLYFKRFFPYYAFNVLGGLDSEGKGCVYTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSD-QLYGMCETLW------EPNLEPD--DLFETIAQALV 172
G+ + +G Q S + P D QL L P EP+ DL +T+
Sbjct: 134 GSYERVGYSAQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEPEAVDLVKTV---FA 190
Query: 173 NACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ +G + ++ D + +++ R D
Sbjct: 191 SATERDIYTGDKVEIVVLNADGIRREYMELRKD 223
>gi|302814429|ref|XP_002988898.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
gi|300143235|gb|EFJ09927.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
Length = 226
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L K+F++ + G D +T+ +
Sbjct: 17 NGGTCVAIAGLDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMASSGFQADVRTLQKN 76
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ RQ Y + + MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 77 LEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCVYTYDAV 136
Query: 122 GNMDLIGCVNQPSDFVVGGPCSD-QLYGMCETLWEPN-----LEPDDLFETIAQALVNAC 175
G+ + G Q S + P D QL L+ P L + E + +A
Sbjct: 137 GSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPPRETATPLTEQEALEIVKDTFASAT 196
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER +G G + +I +D + ++ + D
Sbjct: 197 ERQIYTGDGLEIVVINKDGIHKEYLDLKKD 226
>gi|158293754|ref|XP_315096.4| AGAP004991-PA [Anopheles gambiae str. PEST]
gi|157016597|gb|EAA10482.4| AGAP004991-PA [Anopheles gambiae str. PEST]
Length = 231
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS+VA+ G++ I D R + K+F++ + G DT +
Sbjct: 26 NGGSVVAIAGEDFAVIGADTRLSSGYSIHTRTQNKLFRLSDKTVLASTGCWCDTLALTSL 85
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +Y+ + + MS + M+S ++Y RRF PY+V ++ GLD + + ++ + D
Sbjct: 86 VKVRMQMYKDQHQKNMSTPAVAQMLSILMYNRRFFPYYVSNVLAGLD-QDGKGVVYSYDP 144
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGMCETLWEPNLEP---DDLFETIAQALVNACE 176
IG + + GG P D G + + + EP + I ++A E
Sbjct: 145 IGHCEMTT-YRAGGSAGPLLQPVLDNQIGQ-KNMLNADPEPVKMEKAISIIKDTFISATE 202
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G ++ II +D + + R D
Sbjct: 203 RDIYTGDSVIINIITKDGIKEETLHLRKD 231
>gi|448428541|ref|ZP_21584273.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|448450269|ref|ZP_21592168.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|448481610|ref|ZP_21604961.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
gi|448507503|ref|ZP_21615014.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|448523281|ref|ZP_21618634.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|155212701|gb|ABT17422.1| proteasome beta subunit [Halorubrum sp. TP009]
gi|445676010|gb|ELZ28535.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|445698458|gb|ELZ50502.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|445701680|gb|ELZ53656.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|445812121|gb|EMA62117.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|445821863|gb|EMA71647.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
Length = 243
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V +A D R + G + + QK+ ++ + + G + Q +
Sbjct: 48 TGTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMD 125
+R +LYE + + MS + L + N+L R G +F V+P++ G+D E A I ++D
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLTGNLL---RSGAFFVVQPILGGVDDEGAH--IYSID 162
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G + ++ V G S G+ E ++ ++ D+ A+A+ +A ER+ SG G
Sbjct: 163 ALGGTTE-EEYTVTGSGSQYALGVLEQEYDDDVTIDEAKTIAAKAIQSAVERDLASGNGI 221
Query: 186 VVYIIEQDKVTVRHVK 201
V ++ D V + K
Sbjct: 222 NVAVVTDDGVEITRYK 237
>gi|320101454|ref|YP_004177046.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753806|gb|ADV65564.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 209
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 9 GSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIR 68
G+ + + V +A +KR G L+ N +KI V H+ VG GL D + + +R
Sbjct: 8 GTAIGLKTSEGVVLAAEKRLSYDGFVLSRNARKIHMVTDHVGVGFAGLMGDVGFLVKVLR 67
Query: 69 FRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIG 128
YEL+ R++ + + ++S +LY + P E +V G D E P + +D +G
Sbjct: 68 LEAKNYELQHGREIRARSMAKLLSLILYNYKLAPMLTEVVVGGFDDEG--PSLYILDPVG 125
Query: 129 CVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
+ + VG L G E + P++ + E A+ ER+ +SG G
Sbjct: 126 SLIEEKYVAVGSGAQLAL-GYIEPRYSPSITLAEAEELAVNAIRTVVERDVLSGDG 180
>gi|344235158|gb|EGV91261.1| Proteasome subunit beta type-3 [Cricetulus griseus]
Length = 52
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 40/52 (76%)
Query: 12 VAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+AM GKNCVAIA D+RFGIQ + +FQKIF +G +Y+GL GLATD QTV
Sbjct: 1 MAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 52
>gi|399574445|ref|ZP_10768204.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
gi|399240277|gb|EJN61202.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
Length = 241
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + V +A D R + + + QK+ Q+ + + G + Q++ +
Sbjct: 46 TGTTTVGLKTSEGVVLATDMRASMGYMVSSKDVQKVEQIHPTAALTIAGSVSAAQSLIRS 105
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMD 125
++ +LYE + + MS + L +++N L R G +F V+P++ G+D E P + +MD
Sbjct: 106 LKAETSLYETRRGQDMSMQALATLLANFL---RSGAFFVVQPILGGVDEEG--PHVYSMD 160
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G +++ ++ V G S G+ E +E +L ++ A+A+ +A ER+ SG G
Sbjct: 161 ALGGMSE-ENYTVTGSGSQYALGVLEQHYEEDLSIEEAKTVAAKAIQSAVERDLASGNGI 219
Query: 186 VVYIIEQDKVTV-RH 199
V ++ + V + RH
Sbjct: 220 NVAVVTDEGVDITRH 234
>gi|73535606|pdb|1YA7|H Chain H, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535607|pdb|1YA7|I Chain I, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535608|pdb|1YA7|J Chain J, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535609|pdb|1YA7|K Chain K, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535610|pdb|1YA7|L Chain L, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535611|pdb|1YA7|M Chain M, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535612|pdb|1YA7|N Chain N, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535645|pdb|1YAR|H Chain H, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535646|pdb|1YAR|I Chain I, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535647|pdb|1YAR|J Chain J, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535648|pdb|1YAR|K Chain K, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535649|pdb|1YAR|L Chain L, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535650|pdb|1YAR|M Chain M, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535651|pdb|1YAR|N Chain N, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535666|pdb|1YAU|H Chain H, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535667|pdb|1YAU|I Chain I, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535668|pdb|1YAU|J Chain J, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535669|pdb|1YAU|K Chain K, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535670|pdb|1YAU|L Chain L, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535671|pdb|1YAU|M Chain M, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535672|pdb|1YAU|N Chain N, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|282403716|pdb|3IPM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403717|pdb|3IPM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403718|pdb|3IPM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403719|pdb|3IPM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403720|pdb|3IPM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403721|pdb|3IPM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403722|pdb|3IPM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
Length = 217
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V +T K+ V +A ++R ++ + N +K+FQ+ ++ + + GL D Q + +
Sbjct: 7 TGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRY 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ LY L+ M + + ++SNML + ++ PY V+ +V G+D P + ++D
Sbjct: 67 MKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGID---TAPHVFSIDA 123
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
G + + G S +YG+ E+ + + D+ + + +A+ A +R++ SG
Sbjct: 124 AGG-SVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASG 178
>gi|389860550|ref|YP_006362789.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525453|gb|AFK50651.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 205
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
Query: 9 GSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIR 68
G+++ + + V +A +KR G L+ + +K+F + H VG GL D +Y+ ++
Sbjct: 10 GTVIGIKTSSGVVLAGEKRMTYDGFILSKSVRKLFPITEHTAVGFAGLTGDMNFLYRVLK 69
Query: 69 FRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIG 128
YEL+ R++ + L ++S +LY + P E +V G D P + +D +G
Sbjct: 70 TEAKNYELEHGREIKTRSLAKLLSIILYSYKLFPMLTEAVVGGFDE---APSLFVLDAVG 126
Query: 129 CVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVY 188
+ + + G S + E + ++ ++ +A++ A ER+ +SG G V
Sbjct: 127 SLLEER-YTALGSGSQLALSIIEQSYREDMPLEEAKNLAVKAVLAAIERDVLSGDGVDVL 185
Query: 189 IIEQDKV 195
+I ++ +
Sbjct: 186 VITREGI 192
>gi|16081708|ref|NP_394085.1| proteasome, beta chain [Thermoplasma acidophilum DSM 1728]
gi|130867|sp|P28061.1|PSB_THEAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1633360|pdb|1PMA|B Chain B, Proteasome From Thermoplasma Acidophilum
gi|1633374|pdb|1PMA|P Chain P, Proteasome From Thermoplasma Acidophilum
gi|1633375|pdb|1PMA|Q Chain Q, Proteasome From Thermoplasma Acidophilum
gi|1633376|pdb|1PMA|R Chain R, Proteasome From Thermoplasma Acidophilum
gi|1633377|pdb|1PMA|S Chain S, Proteasome From Thermoplasma Acidophilum
gi|1633378|pdb|1PMA|T Chain T, Proteasome From Thermoplasma Acidophilum
gi|1633379|pdb|1PMA|U Chain U, Proteasome From Thermoplasma Acidophilum
gi|1633380|pdb|1PMA|V Chain V, Proteasome From Thermoplasma Acidophilum
gi|1633381|pdb|1PMA|W Chain W, Proteasome From Thermoplasma Acidophilum
gi|1633382|pdb|1PMA|X Chain X, Proteasome From Thermoplasma Acidophilum
gi|1633383|pdb|1PMA|Y Chain Y, Proteasome From Thermoplasma Acidophilum
gi|1633384|pdb|1PMA|Z Chain Z, Proteasome From Thermoplasma Acidophilum
gi|1633385|pdb|1PMA|1 Chain 1, Proteasome From Thermoplasma Acidophilum
gi|1633386|pdb|1PMA|2 Chain 2, Proteasome From Thermoplasma Acidophilum
gi|154680|gb|AAA72102.1| proteasome beta-subunit [Thermoplasma acidophilum]
gi|10639779|emb|CAC11751.1| proteasome, beta chain [Thermoplasma acidophilum]
Length = 211
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V +T K+ V +A ++R ++ + N +K+FQ+ ++ + + GL D Q + +
Sbjct: 7 TGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRY 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ LY L+ M + + ++SNML + ++ PY V+ +V G+D P + ++D
Sbjct: 67 MKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGID---TAPHVFSIDA 123
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
G + + G S +YG+ E+ + + D+ + + +A+ A +R++ SG
Sbjct: 124 AGG-SVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASG 178
>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
gi|302595703|sp|C6A2V9.1|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
Length = 207
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + K+ V + D+R + ++ KIFQV H+ + G D ++ +
Sbjct: 8 KGTTTVGIVCKDGVVLTADRRASLGNMVISKGVTKIFQVDDHLALAGAGAVGDILSLVRA 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R LY K ++MS K L + SN+L R++ PYF ++ G D +P + ++D+
Sbjct: 68 LRAESKLYRAKVGKEMSTKALATLTSNILSGRKYLPYFGWFLIGGYDE---KPSLYSIDM 124
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G + + +V G + Y + + + + ++ + +A+ A +R+ +G G +
Sbjct: 125 AGGITEDK-YVSAGSGMEFAYSILDNEYSEKITLNNGVKLAIKAINAAIKRDVFTGDGIM 183
Query: 187 VYIIEQD 193
V I+++
Sbjct: 184 VVTIDRE 190
>gi|345004933|ref|YP_004807786.1| proteasome endopeptidase complex subunit beta [halophilic archaeon
DL31]
gi|344320559|gb|AEN05413.1| proteasome endopeptidase complex, beta subunit [halophilic archaeon
DL31]
Length = 242
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 18 NCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELK 77
+ V +A D R + + + QK+ QV H + + G + Q + + +R NL+E++
Sbjct: 58 DAVVLATDMRASLGHMVSSKDVQKVEQVHPHGALTIAGSVSAAQNLIETLRAESNLFEVR 117
Query: 78 ENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFV 137
++MS + L + N+L F Y V P++ G+D E + + ++D +G + D+
Sbjct: 118 RGKEMSMQALSTLTGNLLRSGAF--YIVSPILGGVDSEGSH--VYSIDALGGTTE-EDYA 172
Query: 138 VGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTV 197
V G S G+ E ++ +L+ + +A+ +A ER+ SG G + ++ + V +
Sbjct: 173 VSGSGSQFALGVLEQEYDDDLDIEGAKTVATKAIKSAMERDTASGNGINIAVVTDEGVEI 232
Query: 198 RHVK 201
K
Sbjct: 233 TKEK 236
>gi|48477758|ref|YP_023464.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
gi|74567841|sp|Q6L181.1|PSB_PICTO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|48430406|gb|AAT43271.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
Length = 210
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V +T + V + D R ++ N QK++Q+ ++ + + GL D Q + + +
Sbjct: 7 GTTTVGITAGDYVIMGTDSRATMENFISNKNAQKLYQIDNYAAMTIAGLVGDAQVLVRYM 66
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ LY ++ M ++SNML + +F PY V+ +V G D +P I ++D
Sbjct: 67 KAEMELYRVQRKVSMPIDAAATLLSNMLNQTKFYPYMVQLLVGGYD---TKPHIFSIDAA 123
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG----W 183
G + + G S +YG+ E ++ N+ DD + +A+ A +R++ SG
Sbjct: 124 GG-SVEDIYASTGSGSPFVYGVLEAEYQKNMSLDDGINLVIKAISAAKQRDSASGNMLQL 182
Query: 184 GAV-----VYIIEQDKVTVRHVKTRM 204
G V Y + +D++ R K ++
Sbjct: 183 GVVDPKKGFYYLSEDEILSRLKKLKL 208
>gi|294495429|ref|YP_003541922.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
gi|302595753|sp|D5EAS6.1|PSB_METMS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|292666428|gb|ADE36277.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
Length = 210
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + + V +A +KR + + +KI+Q+ + + G D Q + + I
Sbjct: 9 GTTTVGIVCSDGVVLATEKRATMGNFIASKTAKKIYQIDDLVGMTTAGSVGDAQQLVRMI 68
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
LY+++ ++ K L ++SN+L +R+ P V+ +V G+D P I ++D +
Sbjct: 69 SVESKLYKMRRQESITIKGLTTLLSNILGGQRYFPLMVQLLVGGVDKNG--PAIFSLDAM 126
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + V G S YG+ E + + D+ E +AL NA +R++ SG G V
Sbjct: 127 GGNIEETKAVATGSGSPMAYGVLEDRYHEGINVDEGMELAVRALYNAMKRDSASGNGIDV 186
Query: 188 YIIEQD 193
I D
Sbjct: 187 VKITAD 192
>gi|330834117|ref|YP_004408845.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329566256|gb|AEB94361.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 217
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
SI G + V + K+ V +A D+R +KI + + + G D Q
Sbjct: 17 SIKILKGTTTVGLVAKDSVVLAADRRASAGFFVANKMVRKIVYIDDRIGMTTAGSVADLQ 76
Query: 62 TVYQKIRFRQNLYE---LKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAE 118
+Y + +N+Y + NR ++ K L ++N+L + ++ PY V+ ++ G D +
Sbjct: 77 FIYN---YMKNIYHYNVISGNRPVTVKSLATYLTNVLSQSKYFPYLVQILIGGYD---TQ 130
Query: 119 PIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERN 178
P + N+D +G + + + +V G S G+ E + P+L ++ + A+A+++A +R+
Sbjct: 131 PRLFNLDYLGDMTEET-YVATGSGSPVAMGVLEDGYRPDLSGEEAMDLGARAVLSAIKRD 189
Query: 179 AVSGWGAVVYIIEQDKVTVRHV 200
+ +G G +V + +D R +
Sbjct: 190 SFTGTGVIVTKLSKDGHVEREI 211
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 94/189 (49%), Gaps = 3/189 (1%)
Query: 10 SIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQKIR 68
+ V + + V +A DKR + G +AD +K++++ ++ + + G D Q + + +
Sbjct: 3 TTVGLICDDAVILATDKRASL-GNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLI 61
Query: 69 FRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIG 128
LY+++ R + P ++SN+L+ R P+ + ++ G D + ++D +G
Sbjct: 62 AEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLF-SLDPLG 120
Query: 129 CVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVY 188
+N+ F G S YG+ E ++ ++ ++ + AL +A ER+ SG G +
Sbjct: 121 GMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLA 180
Query: 189 IIEQDKVTV 197
+I +D V +
Sbjct: 181 VITKDGVKI 189
>gi|62087736|dbj|BAD92315.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 196
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+I+A+ G++ +A D R + + K +++ +G G D T+ +
Sbjct: 40 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 99
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + + D
Sbjct: 100 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGAVYSFD 158
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETL 153
+G + S F GG S L + + L
Sbjct: 159 PVGSYQRDS-FKAGGSASAMLQPLLDNL 185
>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
Length = 204
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+ G + V + ++ V +A D+R + A N KI+Q+ + + G D ++ +
Sbjct: 5 FKGTTTVGIVCRDGVVLAADRRASLGNMVYAKNVTKIYQIDERLAIAGAGNVGDILSLVR 64
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+R LY + R MS K L +++N+L R+ PY V +V G D P + ++D
Sbjct: 65 LLRAEVRLYRSRVGRSMSAKALATLLANILNGTRYFPYLVWFLVGGYDD---APRLYSVD 121
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+ G + + +V G + + + ++ ++P + ++ + +A+ +A +R+ +G G
Sbjct: 122 MAGGITEDK-YVAAGSGMEFAFSILDSQYKPEMSVEEGVKLAVRAINSAIKRDVFTGEGI 180
Query: 186 VVYIIEQ 192
V I +
Sbjct: 181 TVVTITE 187
>gi|313126409|ref|YP_004036679.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|448286253|ref|ZP_21477487.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|312292774|gb|ADQ67234.1| proteasome endopeptidase complex, beta component [Halogeometricum
borinquense DSM 11551]
gi|445575086|gb|ELY29568.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
Length = 243
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V + ++ V +A D R + + N QK+ ++ + + G + Q++
Sbjct: 46 TKTGTTTVGLKTEDGVVLATDMRASLGHMVSSKNVQKVEEIHPTGALTIAGSVSAAQSLI 105
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ IR LYE + MS + L ++ N L F Y V+P++ G D E A I ++
Sbjct: 106 RSIRAEVRLYESRRGEDMSMQALSTLLGNFLRSGAF--YIVQPILGGFDDEGAH--IYSI 161
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + + ++ V G S G+ E + +L ++ T A+A+ +A ER+ SG G
Sbjct: 162 DPAGSILE-EEYTVTGSGSQYALGVLEQEYSNDLSIEEAKTTAARAIKSAVERDLASGNG 220
Query: 185 AVVYIIEQDKVTVRHVK 201
V ++ +D V + K
Sbjct: 221 INVCVVTEDGVEITQHK 237
>gi|448738912|ref|ZP_21720932.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
gi|445800726|gb|EMA51074.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
Length = 228
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 5/182 (2%)
Query: 18 NCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELK 77
+ V +A D+R + QKI ++ + + G + Q + +R +LYE +
Sbjct: 44 DGVVLATDRRASAGNMVASKRAQKIAEIHPRGALTISGAVSAAQALISNLRAEADLYEAR 103
Query: 78 ENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFV 137
+MS + L + SN L F Y V+P++ G+D E A I ++D G V + ++
Sbjct: 104 RGEEMSMQALSTLTSNFLRSGAF--YIVQPILGGVDDEGAH--IYSIDPAGSVME-EEYD 158
Query: 138 VGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTV 197
G S YG+ E +E L D+ A+A+ +A ER+ SG G ++ I +D V +
Sbjct: 159 ATGSGSPFAYGVLEQQYEDGLSNDEARTVAARAVKSAVERDTASGNGIILSEITEDGVEI 218
Query: 198 RH 199
Sbjct: 219 EE 220
>gi|340054849|emb|CCC49156.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
gi|340054851|emb|CCC49158.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
Length = 258
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRF-GIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG++ A+ GK+ V + D R G ++ K+FQ+ H+++ G+ D + Q
Sbjct: 51 NGGTVAAVAGKDYVILGGDTRLNGDFCIHSRNDRSKLFQLTDHVFLASTGMQADRLQLQQ 110
Query: 66 KIRFRQNLYELKENRKM-SPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+++R Y+ ++ S + + + S +LY+RRF PY+ M+VGLD E + +
Sbjct: 111 MLKYRIQWYQYNNGGEVPSTRAIAKLTSTILYQRRFFPYYTFNMIVGLD-EKGAGVCYSY 169
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQALVNAC 175
D +G +P + G S + + + L L ++ E + A A
Sbjct: 170 DPVGST-EPFRYGTSGSASSFIEPLMDCLLTRQHMVQQAPAELGMNEALEMLKSAFTGAA 228
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G +II + V + R D
Sbjct: 229 ERDIFTGDSVCFHIITTEGVRTEFFELRKD 258
>gi|118575464|ref|YP_875207.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|302595701|sp|A0RU86.1|PSB1_CENSY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|118193985|gb|ABK76903.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 193
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 4/177 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V +T V +A +KR ++ N +K FQ+ ++ GL D Q + +I
Sbjct: 3 GATAVGITYAGGVILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQI 62
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ ++ R + P + M+SNM+YERRF P + +V G+ EP I +D +
Sbjct: 63 SALAKIRKMDLKRDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGV---VGEPAIYTLDSL 119
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
G V P ++ G ++ G+ + ++ + D + + + +A R++ SG G
Sbjct: 120 GSV-LPDEYAAVGTGAEMALGVLDPQFKSGMSEKDAVDLAVRGIRSAALRDSFSGDG 175
>gi|448445494|ref|ZP_21590392.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
gi|445685018|gb|ELZ37380.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
Length = 243
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V +A D R + G + + QK+ +V + + G + Q +
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQHLIST 107
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ +LYE + + MS + L + N+L F Y V+P++ G+D E A I ++D
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGAH--IYSIDA 163
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + ++ V G S G+ E + ++ D+ E A+A+ +A ER+ SG G
Sbjct: 164 LGGTTE-EEYTVTGSGSQYALGVLEQEYHDDVTVDEATEIAAKAIQSAVERDLASGNGIN 222
Query: 187 VYIIEQDKVTVRHVK 201
V ++ + V + K
Sbjct: 223 VAVVTDEGVDITRYK 237
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
Length = 224
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQ 65
G + V + + V +A DKR + G +AD +K++++ ++ + + G D Q + +
Sbjct: 5 KGTTTVGLICDDAVILATDKRASL-GNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVR 63
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ LY+++ R + P ++SN+L+ R P+ + ++ G D + ++D
Sbjct: 64 LLTAEAKLYKMRTGRNIPPLACATLLSNILHSSRVFPFLTQIIIGGYDLLEGAKLF-SLD 122
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G +N+ F G S YG+ E ++ + ++ + AL +A ER+ SG G
Sbjct: 123 PLGGMNEEKTFTATGSGSPIAYGVLEAGYDREMSVEEGIKLAINALKSAMERDTFSGNGI 182
Query: 186 VVYIIEQDKVTV 197
+ +I ++ V +
Sbjct: 183 SLAVITKEGVKI 194
>gi|159118134|ref|XP_001709286.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
gi|157437402|gb|EDO81612.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
Length = 254
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 12/206 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+I+A+ G + IA D R L+ N +K+F V + G+ D Q + +
Sbjct: 54 NGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLLKH 113
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ Y LK ++++ + + ++S M+Y RR P++ +V G+D E + + D+
Sbjct: 114 MKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSE-GRGAVYSYDV 172
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDD-------LFETIAQALVNACERNA 179
IG + + + G + + C L E L ++ FE I A + ER+
Sbjct: 173 IGSTLR-TRYGSAGTGNAMI---CPILDEAILSKNEAEITREFAFELIQSAFRSCAERDI 228
Query: 180 VSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G V I D + R + R D
Sbjct: 229 YTGDSVVAMCISADGIQERTFELRKD 254
>gi|303278464|ref|XP_003058525.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459685|gb|EEH56980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 220
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A+ G++ V A D R + L +++KI ++ + G D T+ +
Sbjct: 11 NGGTVLAVAGEDYVVCAADTRMSTGYSVLTRDYKKIEKMTEKCVMASAGFMADAVTLKKT 70
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R YE + N++M M+SN LY RRF PY+ +V GLD E + + D
Sbjct: 71 LKARCVSYEFQNNKEMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDKE-GKGAVFTYDA 129
Query: 127 IGCVNQPSDFVVGG------PCSD-QLYGMCETLWEPNLEPDDLFETIAQALVNAC---- 175
+G + + G P D QL + + L E+ A LV C
Sbjct: 130 VGSYERTNYSCQGSGQGLIMPVLDNQLKTVSPLVLPAQSSATPLSESEAVDLVKDCFATA 189
Query: 176 -ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++II +D + + ++D
Sbjct: 190 GERDIYTGDSVEIWIINKDGLRKEYQDLKLD 220
>gi|242247122|ref|NP_001156136.1| proteasome subunit beta type-like [Acyrthosiphon pisum]
gi|239799300|dbj|BAH70578.1| ACYPI003417 [Acyrthosiphon pisum]
Length = 222
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA++GK+ +A D R K+FQ+ +G G DT ++
Sbjct: 21 NGGSIVAISGKDFAIVASDTRLSEGYMIYTRKQSKLFQLSDKSVLGCTGCWCDTLSLTNI 80
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I+ + Y N M P + ++S +LY RRF PY+V ++ GLD E + + D
Sbjct: 81 IQSQLKSYLYDHNTIMQPNSIAQLLSTLLYSRRFFPYYVYNVLAGLDIN-GEGCLYSYDP 139
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
+G + ++ GG P D G T P E + L + A A ER+
Sbjct: 140 VGHC-EKVNYTAGGSSGVLMQPFLDSWLGN-RTAENPVTEEEAL-SLVKDAFTAAGERDI 196
Query: 180 VSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G V II+++ + V+ R D
Sbjct: 197 YTGDEVVYNIIKKNGIKTGVVQLRKD 222
>gi|389584151|dbj|GAB66884.1| proteasome subunit beta type 1 [Plasmodium cynomolgi strain B]
Length = 241
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++ +TGK+ V +A D R + + + KI ++ +G G+ +D +T++
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ + L+ L+ V+ ++ +LY RRF PY+ ++ G+ E + ++ N D
Sbjct: 97 LKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNEN-KGVLYNYDA 155
Query: 127 IGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
IG + + VG + +++ + + N D + + A+ +A ER+
Sbjct: 156 IGSYCEATHSCVGSGSALILPILDNRMEQKNQLIKNLNFNLRDDIDFVKDAITSATERDI 215
Query: 180 VSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G +YII+ V ++ + D
Sbjct: 216 YTGDKTEIYIIDHMGVNTTTLELKQD 241
>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|17380268|sp|Q9V0N9.1|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380741512|tpe|CCE70146.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 207
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+ G + V + + V +A D+R + A N KI ++ H+ + G D + +
Sbjct: 8 FKGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVR 67
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+R LY + ++MS K L +++NML R PY +V G D +P + ++D
Sbjct: 68 LLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDE---KPRLYSVD 124
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
++G + + +V G + Y + ++ + +L+ + + +A+ +A +R+ SG G
Sbjct: 125 MMGGITEDK-YVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGI 183
Query: 186 VVYIIEQD 193
+V I ++
Sbjct: 184 MVVTITEE 191
>gi|46397057|sp|Q9U794.1|PSB1_TRYBB RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome subunit beta-6
gi|6224687|gb|AAF05905.1|AF148124_1 20S proteasome beta 6 subunit [Trypanosoma brucei brucei]
gi|261329654|emb|CBH12636.1| 20S proteasome beta 6 subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 258
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 13/215 (6%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRF-GIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S T NGG+I A+ G N V + D R G + K+F++ +++ G+ D
Sbjct: 46 SPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADR 105
Query: 61 QTVYQKIRFRQNLYELKENRKM-SPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
+ Q +++R Y+ K+ S K + + S MLY+RRF PY+ M+VG+D E
Sbjct: 106 LQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGID-EKGAG 164
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQA 170
+ + D +G +P + G S + + + L +L ++ + A
Sbjct: 165 VCYSYDPVGST-EPFRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNA 223
Query: 171 LVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A ER+ +G +II D V + R D
Sbjct: 224 FTGAAERDIFTGDTVCFHIITADGVGTEMFELRKD 258
>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
Length = 203
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 4/187 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + K+ V +A D+R + L++N K+F + H+ + G D ++ +
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R LY + ++MS K L + SN+L+ RF PYF ++ G D +P + ++D+
Sbjct: 66 LRAEAKLYRARVGKEMSVKALATLTSNVLHGNRFMPYFGWFLIAGHDE---KPGLYSIDM 122
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + F G + + + E + ++ + + +A+ A R+ +G G
Sbjct: 123 AGGVTEDK-FTAAGSGMEFAFSILEENYREDMPLEGGVKLALRAIKAATRRDVFTGGGVT 181
Query: 187 VYIIEQD 193
+ + ++
Sbjct: 182 LVTVTRE 188
>gi|125977126|ref|XP_001352596.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|195168113|ref|XP_002024876.1| GL17976 [Drosophila persimilis]
gi|54641344|gb|EAL30094.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|194108306|gb|EDW30349.1| GL17976 [Drosophila persimilis]
Length = 235
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 13/210 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G++ V IA D R K+F + + + G DT ++
Sbjct: 28 NGGSIVAIAGEDFVVIAADTRLSSGYNIHTRKQSKLFPLSNQTVLASTGCWCDTLSLTGL 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R YE + M+ + M+S ++Y RRF PY+V ++ G+D + + ++ + D
Sbjct: 88 MKLRMQNYEHTHLKTMTTDAVAQMLSIIMYNRRFFPYYVSNILAGIDKD-GKGVVFSYDP 146
Query: 127 IGCVNQPSDFVVGG-------PCSDQLYGMCETLWE----PNLEPDDLFETIAQALVNAC 175
IG + + + GG P D G P + + + ++A
Sbjct: 147 IGHCERAT-YRAGGTAGALLQPVLDNQIGYKNMNLHGEDAPEVTKERAVAVASDTFISAA 205
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++ II +D + + ++ R D
Sbjct: 206 ERDIYTGDSVLINIITKDGIETQELQLRQD 235
>gi|13541494|ref|NP_111182.1| proteasome protease subunit beta [Thermoplasma volcanium GSS1]
gi|74575802|sp|Q97AZ7.1|PSB_THEVO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|14324878|dbj|BAB59804.1| proteasome beta subunit [Thermoplasma volcanium GSS1]
gi|239061209|emb|CAZ48528.1| 20S proteasome beta subunit [Thermoplasma volcanium GSS1]
Length = 211
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V +T + V +A ++R ++ + N +K+FQ+ ++ + + GL D Q + +
Sbjct: 7 TGTTTVGITLTDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRY 66
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ LY L+ M + + ++SNML + ++ PY V+ +V G+D P + ++D
Sbjct: 67 MKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGID---TSPHVFSIDA 123
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
G + + G S +YG+ E+ + L D+ + + +A+ A +R++ SG
Sbjct: 124 AGG-SVEDIYASTGSGSPFVYGVLESQYNEKLSIDEGVDLVIRAISAAKQRDSASG 178
>gi|345560620|gb|EGX43745.1| hypothetical protein AOL_s00215g481 [Arthrobotrys oligospora ATCC
24927]
Length = 266
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S T NGG I+ + GK+ V IA D R + +K++ +GS + +G+ G++ D +
Sbjct: 28 SPYTENGGCILGIAGKDYVIIAGDTRSSEGYSINTRTARKVYDIGSGLILGVVGMSADGE 87
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPII 121
+ +K+ + + Y+ ++ ++ M+S +LY++RF PY+ +P++ GLD E I
Sbjct: 88 ELVRKVARKIDDYKRNHDKHITVAAAAVMLSRILYQKRFFPYYCQPLLGGLDEEGVGAIY 147
Query: 122 GNMDLIGCVNQPSDFVVGGPCS 143
+ D +G + G S
Sbjct: 148 -SYDYVGSFEREQSRAYGAAAS 168
>gi|389847077|ref|YP_006349316.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|448614975|ref|ZP_21664003.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|388244383|gb|AFK19329.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|445753062|gb|EMA04481.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
Length = 245
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V + V +A D R + + + QK+ ++ + + G + Q++
Sbjct: 46 TKTGTTTVGIKTDEGVVLATDMRASLGHMVSSKDVQKVEEIHPRGALTIAGSVSAAQSLI 105
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+R LYE + MS + L ++ N L R G Y V+P++ G+D E A I ++
Sbjct: 106 SSLRAEVRLYESRRGEDMSMQALSTLVGNFL--RSGGFYIVQPILGGVDDEGAH--IYSI 161
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + + ++ V G S G+ E + +L D+ E +A+ +A ER+ SG G
Sbjct: 162 DPAGSILEE-EYTVTGSGSQYALGVLEQEFSEDLSIDEAREVATKAIRSAVERDLASGNG 220
Query: 185 AVVYIIEQDKVTV-RH 199
+ ++ +D V + RH
Sbjct: 221 INIAVVTEDGVDIQRH 236
>gi|305664308|ref|YP_003860596.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304378877|gb|ADM28716.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
aggregans DSM 17230]
Length = 200
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 4 MTY----NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATD 59
MTY G + V + + V +A +KR G ++ +K+F++ HM + GL D
Sbjct: 1 MTYERLVTGATAVGIKVNDGVVVAAEKRISYGGYIVSRAGKKVFRIADHMVIAAAGLFAD 60
Query: 60 TQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
Q++ + I EL + KM + ++S +LY + P+ E + G D E
Sbjct: 61 MQSLSRIISAEIMYRELLSSSKMRVRAAAKLLSAILYSYKLMPFLSEIIFAGFDEEGYHL 120
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
+ +D +G + + D+ G + G+ E+ ++ L D E +++ A R+A
Sbjct: 121 YV--LDPVGSIIED-DYAAIGTGASIAIGVIESEYKNTLTIDQATELAIKSVKAAISRDA 177
Query: 180 VSGWGAVVYIIEQDKVTVRHV 200
VSG G + ++ + + R +
Sbjct: 178 VSGDGIDIAVVTNNGINERSI 198
>gi|330508619|ref|YP_004385047.1| proteasome subunit beta [Methanosaeta concilii GP6]
gi|328929427|gb|AEB69229.1| proteasome subunit beta [Methanosaeta concilii GP6]
Length = 206
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+ G + V + V +A + R + + +KI+Q+ + + G D Q++ +
Sbjct: 5 FKGTTTVGVLCDGGVVLASESRATMGSFIASSQAKKIYQIDDLVGMTTAGGVGDAQSLVR 64
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
++ LY+++ ++ K + M++N+L RR+ P+ V+ ++ G+D P I ++D
Sbjct: 65 MVQVEARLYKMQRGEGLTVKAVTTMLANILSSRRYYPFMVQLIMGGVDRYG--PRIYSLD 122
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
+G + V G S YG+ E +++P + +D A+A+ NA +R++ SG
Sbjct: 123 ALGGQIEERRIVATGSGSPVAYGVLEAMYKPGISVEDGTVLAARAIHNALKRDSASG 179
>gi|600387|emb|CAA47753.1| proteosome subunit [Arabidopsis thaliana]
Length = 230
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + IA D R + L+ ++ KI ++ + G D + + +
Sbjct: 21 NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKV 80
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
++ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 81 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAV 140
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPD---------DLFETIAQALV 172
G+ + +G Q S + P D L P + + DL +T+
Sbjct: 141 GSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTV---FA 197
Query: 173 NACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ +G + I++ D + + R D
Sbjct: 198 SATERDIYTGDKLEIMILKADGIKTELMDLRKD 230
>gi|168019760|ref|XP_001762412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686490|gb|EDQ72879.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + IA D R + L ++ KI + + G D +++ +
Sbjct: 28 NGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKIHHITEKCVLASSGFQADVRSLQKN 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y+ + +++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 88 LDARHQIYQHQHSKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 147
Query: 122 GNMDLIGCVNQPSDFVVGGPCSD-QLYGMCETLWEPNLEPDDLFET-----IAQALVNAC 175
G+ + G +Q S + P D QL + P L E+ I +A
Sbjct: 148 GSYERSGYSSQGSGQTLIMPVLDNQLKSASPLVLPPRESSTPLTESEAVDLIKDTFASAA 207
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G G + II ++ + + + D
Sbjct: 208 ERDIYTGDGVEIVIINKEGIRRETMALKRD 237
>gi|15232965|ref|NP_191641.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|334186160|ref|NP_001190146.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|297820934|ref|XP_002878350.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|12643281|sp|P42742.2|PSB1_ARATH RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome beta subunit F-1; AltName: Full=Proteasome
component 5; AltName: Full=Proteasome subunit beta
type-6; AltName: Full=TAS-F22/FAFP98; AltName:
Full=TAS-G39.20
gi|577531|emb|CAA56201.1| proteasome subunit [Arabidopsis thaliana]
gi|3421120|gb|AAC32073.1| 20S proteasome beta subunit PBF1 [Arabidopsis thaliana]
gi|7329692|emb|CAB82686.1| proteasome component C5 [Arabidopsis thaliana]
gi|17065428|gb|AAL32868.1| proteasome component C5 [Arabidopsis thaliana]
gi|20148485|gb|AAM10133.1| proteasome component C5 [Arabidopsis thaliana]
gi|21554745|gb|AAM63678.1| proteasome component C5 [Arabidopsis thaliana]
gi|297324188|gb|EFH54609.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|332646591|gb|AEE80112.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646593|gb|AEE80114.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + IA D R + L+ ++ KI ++ + G D + + +
Sbjct: 14 NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKV 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
++ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + +G Q S + P D L P L + + + +A
Sbjct: 134 GSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASAT 193
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + I++ D + + R D
Sbjct: 194 ERDIYTGDKLEIMILKADGIKTELMDLRKD 223
>gi|72391616|ref|XP_846102.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175642|gb|AAX69774.1| proteasome beta 6 subunit [Trypanosoma brucei]
gi|70802638|gb|AAZ12543.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 258
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 13/215 (6%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRF-GIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S T NGG+I A+ G N V + D R G + K+F++ +++ G+ D
Sbjct: 46 SPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADR 105
Query: 61 QTVYQKIRFRQNLYELKENRKM-SPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
+ Q +++R Y+ K+ S K + + S MLY+RRF PY+ M+VG+D E
Sbjct: 106 LQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGID-EKGAG 164
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQA 170
+ + D +G +P + G S + + + L +L ++ + A
Sbjct: 165 VCYSYDPVGST-EPFRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNA 223
Query: 171 LVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A ER+ +G +I+ D V + R D
Sbjct: 224 FTGAAERDIFTGDTVCFHIVTADGVGTEMFELRKD 258
>gi|222479043|ref|YP_002565280.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
gi|302595813|sp|B9LTS6.1|PSB_HALLT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|222451945|gb|ACM56210.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
Length = 243
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V +A D R + G + + QK+ +V + + G + Q +
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLIST 107
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ +LYE + + MS + L + N+L F Y V+P++ G+D E + I ++D
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGSH--IYSIDA 163
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + ++ V G S G+ E ++ ++ D+ A+A+ +A ER+ SG G
Sbjct: 164 LGGTTE-EEYTVTGSGSQYALGVLEQEYDDDVTVDEAKTMAAKAIQSAVERDLASGNGIN 222
Query: 187 VYIIEQDKVTVRHVK 201
V ++ D V + K
Sbjct: 223 VAVVTDDGVDITRYK 237
>gi|330791448|ref|XP_003283805.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
gi|325086304|gb|EGC39696.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
Length = 236
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTAL-ADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+++A+ GK+ IA D R G + ++ K+FQ+ + + G+ DT + +
Sbjct: 29 NGGTVMAVAGKDYCVIAGDTRMSDGGYGIQTRHYTKVFQLTNKCVLATSGMQADTIALQK 88
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+++ Y+ + + MS + +SN LY +RF PY+ +V G+D E E I D
Sbjct: 89 RLKLMLETYQKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVD-EKGEGWIWTYD 147
Query: 126 LIGC------VNQPSDFVVGGPCSD-QLYGMCETLWEPN--LEPDDLFETIAQALVNACE 176
+G +Q S + P D Q+ + + + N + D + + A+ +A E
Sbjct: 148 AVGSHERVKYSSQGSGNQLVIPLLDNQVAKRNQQIIQGNGDVSCDQVVSFVKDAITSAGE 207
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G A + ++++D V + ++D
Sbjct: 208 RDIYTGDFADIVVVDKDGVRWEKFELKLD 236
>gi|346472379|gb|AEO36034.1| hypothetical protein [Amblyomma maculatum]
Length = 232
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G++ IA D R + K+F++ + +G G D T +
Sbjct: 27 NGGSIVAIAGEDFAVIASDSRLSTGYSIYTREQSKLFKLSNQCVLGSTGCWCDILTFTRF 86
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +Y + +R MS + ++ MLY +RF PY++ ++ GLD E + I D
Sbjct: 87 LEARMKMYLHEHHRLMSTPAVAQLVVTMLYNKRFFPYYISNILAGLD-EDGKGCIYCYDP 145
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCET-LWEPNLEPDDL--------FETIAQALVNACER 177
+G + + GG S L + + + N+E +L I +++ ER
Sbjct: 146 VGHCER-VQYRAGGSSSALLQPLLDNQIGFKNMENVELVPPTRERAVNIIKDVFISSAER 204
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G V+ II+++ + + R D
Sbjct: 205 DIYTGDSVVINIIDKNGIKEEMLALRRD 232
>gi|195927408|pdb|3C91|H Chain H, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927409|pdb|3C91|I Chain I, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927410|pdb|3C91|J Chain J, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927411|pdb|3C91|K Chain K, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927412|pdb|3C91|L Chain L, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927413|pdb|3C91|M Chain M, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927414|pdb|3C91|N Chain N, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927422|pdb|3C91|V Chain V, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927423|pdb|3C91|W Chain W, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927424|pdb|3C91|X Chain X, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927425|pdb|3C91|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927426|pdb|3C91|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927427|pdb|3C91|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927428|pdb|3C91|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927436|pdb|3C92|H Chain H, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927437|pdb|3C92|I Chain I, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927438|pdb|3C92|J Chain J, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927439|pdb|3C92|K Chain K, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927440|pdb|3C92|L Chain L, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927441|pdb|3C92|M Chain M, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927442|pdb|3C92|N Chain N, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927450|pdb|3C92|V Chain V, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927451|pdb|3C92|W Chain W, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927452|pdb|3C92|X Chain X, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927453|pdb|3C92|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927454|pdb|3C92|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927455|pdb|3C92|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927456|pdb|3C92|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|262368054|pdb|3JRM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368055|pdb|3JRM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368056|pdb|3JRM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368057|pdb|3JRM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368058|pdb|3JRM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368059|pdb|3JRM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368060|pdb|3JRM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368080|pdb|3JSE|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368081|pdb|3JSE|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368082|pdb|3JSE|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368083|pdb|3JSE|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368084|pdb|3JSE|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368085|pdb|3JSE|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368086|pdb|3JSE|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368101|pdb|3JTL|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368102|pdb|3JTL|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368103|pdb|3JTL|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368104|pdb|3JTL|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368105|pdb|3JTL|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368106|pdb|3JTL|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368107|pdb|3JTL|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
Length = 203
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 91/173 (52%), Gaps = 4/173 (2%)
Query: 10 SIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRF 69
+ V +T K+ V +A ++R ++ + N +K+FQ+ ++ + + GL D Q + + ++
Sbjct: 2 TTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKA 61
Query: 70 RQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGC 129
LY L+ M + + ++SNML + ++ PY V+ +V G+D P + ++D G
Sbjct: 62 ELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGID---TAPHVFSIDAAGG 118
Query: 130 VNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
+ + G S +YG+ E+ + + D+ + + +A+ A +R++ SG
Sbjct: 119 -SVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASG 170
>gi|355571914|ref|ZP_09043122.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
gi|354825010|gb|EHF09245.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
Length = 213
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 93/187 (49%), Gaps = 2/187 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + ++ V +A + R + + +KI+Q+ + + G D Q + +
Sbjct: 10 TGTTTVGLVLRDAVVLASEMRATMGYLIASKKAKKIYQIADRIGMTTAGGVGDAQQIARL 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ +LY+++ R ++ + ++SN+L R+ P++V+ +V G+D P + +D
Sbjct: 70 MTVECSLYQIRRGRPITIGAVATLLSNILNANRYYPFYVQLLVGGVDE--GGPKLYAVDA 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G ++ + V G S +G+ E + +L D+ +A+ +A +R+A SG G
Sbjct: 128 LGGASREEEMVATGSGSPMAFGVLEDRYSKDLSEDEAVALAVRAIRSAMKRDAGSGEGIH 187
Query: 187 VYIIEQD 193
V +I ++
Sbjct: 188 VVVITKE 194
>gi|226471340|emb|CAX70751.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 10/207 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQG--TALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
NGG+++ ++G + IA D R G L+ N ++F++G +G G D T+
Sbjct: 8 NGGTVMGISGNDFALIASDTRL-CDGDFVILSRNCPRLFKLGRGNVLGYAGFHGDVLTLT 66
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE-----TAEP 119
+ + + Y + +S K L ++S LY RRF P++V ++VGLD + + +P
Sbjct: 67 KLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGDRGVLYSYDP 126
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWE-PNLEPDDLFETIAQALVNACERN 178
+G+ + G S + P D G + + L + + ++A ER+
Sbjct: 127 -VGSYEAEGYRASGSSAAILQPFLDSTVGNKTSKYHVSRLNKETAVKLTHDIFISAAERD 185
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
G G V+Y + +D ++ R D
Sbjct: 186 TQCGDGVVIYTVTKDGLSETSYPLRRD 212
>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
Length = 203
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 95/197 (48%), Gaps = 3/197 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + V +A +KR L+ + +K+F V + + G+ D Q + + +
Sbjct: 8 GATAVGIKTAGGVVLAAEKRVSYGFYTLSSSGKKVFVVDDKLAIASAGIIADMQALAKIL 67
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ YEL+ +K S + ++S +++ RRF P+F E +V G+D E I+ MD +
Sbjct: 68 KLNAKSYELEMKKKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGVDEEGPHLIV--MDPL 125
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + ++ G + + + + ++ ++ + QAL A ER+ VSG G +
Sbjct: 126 GSLIE-DNYAALGTGAKLAAAVLDGNYRNDMSIEEAKKLAVQALKAAIERDPVSGGGIDL 184
Query: 188 YIIEQDKVTVRHVKTRM 204
++++ V+ ++
Sbjct: 185 VVVDEKGAREEEVRVQL 201
>gi|224033845|gb|ACN35998.1| unknown [Zea mays]
Length = 221
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L + KI + + G D + +++
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALHKN 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R+ LY+ + N++MS + ++SN LY +RF PY+ ++ GLD E E + +
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKECVFTYDAV 131
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + G Q + + P D L P L + + + +A
Sbjct: 132 GSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFASAT 191
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I + ++ R D
Sbjct: 192 ERDIYTGDKLEIVVINKVGTKREYIDLRKD 221
>gi|15920523|ref|NP_376192.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574822|sp|Q975U8.1|PSB1_SULTO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|15621306|dbj|BAB65301.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 197
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
Query: 18 NCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELK 77
+ + +A ++R G L+ + +K+F++G G G+ D QT+ + + YE+
Sbjct: 15 DGIILAAERRLSYGGFVLSRSAKKVFKIGRFGIAG-AGIMGDIQTLTRLMNVEIKYYEMY 73
Query: 78 ENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFV 137
N+ +S K ++S +LY+ ++ P+ E + G+D E P + +D IG + + +
Sbjct: 74 NNKPISVKAAAKLLSVILYQYKWTPFISELLFGGVDDEG--PKLFVLDPIGSLIEDNYAA 131
Query: 138 VGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVT 196
VG + G+ E+ ++P++ D E + +AL A ER+ SG G + I++D +
Sbjct: 132 VGSGARVAI-GVLESEYDPSMNLDKGKEIVLKALKAAIERDVTSGDGIDILTIKRDNTS 189
>gi|443720540|gb|ELU10244.1| hypothetical protein CAPTEDRAFT_147453 [Capitella teleta]
Length = 59
Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 40/46 (86%)
Query: 160 PDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
PD LFE ++QA++++C+R+A+SGWG VV+IIE+DKVT R +K RMD
Sbjct: 14 PDVLFEKVSQAMMSSCDRDAISGWGVVVHIIEKDKVTTRTLKARMD 59
>gi|221056989|ref|XP_002259632.1| Proteasome subunit beta type [Plasmodium knowlesi strain H]
gi|193809704|emb|CAQ40406.1| Proteasome subunit beta type, putative [Plasmodium knowlesi strain
H]
Length = 241
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 8/206 (3%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++ +TGK+ V +A D R + + KI ++ +G G+ +D +T++
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRYCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ + L+ L+ V+ ++ +LY RRF PY+ ++ G+ + + ++ N D
Sbjct: 97 LKKKIELFVLEHGHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDN-KGVLYNYDA 155
Query: 127 IGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
IG + + VG + +++ + + N D + + A+ +A ER+
Sbjct: 156 IGSYCEATHSCVGSGAALIFPILDNRMEQKNQLIKNLNFNLRDDIDFVKDAITSATERDI 215
Query: 180 VSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G +YII+Q V + + D
Sbjct: 216 YTGDQTEIYIIDQMGVKTTTLDLKQD 241
>gi|56758256|gb|AAW27268.1| SJCHGC09410 protein [Schistosoma japonicum]
gi|226489270|emb|CAX75779.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
gi|226489272|emb|CAX75780.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
gi|226489274|emb|CAX75781.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 10/207 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQG--TALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
NGG+++ ++G + IA D R G L+ N ++F++G +G G D T+
Sbjct: 8 NGGTVMGISGNDFALIASDTRL-CDGDFVILSRNCPRLFKLGRGNVLGCAGFHGDVLTLT 66
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE-----TAEP 119
+ + + Y + +S K L ++S LY RRF P++V ++VGLD + + +P
Sbjct: 67 KLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGDRGVLYSYDP 126
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWE-PNLEPDDLFETIAQALVNACERN 178
+G+ + G S + P D G + + L + + ++A ER+
Sbjct: 127 -VGSYEAEGYRASGSSAAILQPFLDSTVGNKTSKYHVSRLNKETAVKLTHDIFISAAERD 185
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
G G V+Y + +D ++ R D
Sbjct: 186 TQCGDGVVIYTVTKDGLSETSYPLRRD 212
>gi|336477060|ref|YP_004616201.1| proteasome endopeptidase complex subunit beta [Methanosalsum
zhilinae DSM 4017]
gi|335930441|gb|AEH60982.1| proteasome endopeptidase complex, beta subunit [Methanosalsum
zhilinae DSM 4017]
Length = 210
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + ++ V +A +KR + + +KI+Q+ + + G D Q + + I
Sbjct: 9 GTTTVGIVCRDGVVLATEKRATMGNLIASKTAKKIYQIDDLVGLTTAGSVGDAQQIVRLI 68
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
LY+++ M+ K + ++SN+L +R+ P V+ ++ G+D + P + ++D +
Sbjct: 69 SVESRLYKMRRQETMTIKGITTLLSNLLSGQRYYPLMVQLLIGGVDKKG--PNLYSLDAL 126
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
G + + ++ V G S YG+ E + ++ ++ + +AL NA +R++ SG G
Sbjct: 127 GGMIEETNAVATGSGSPIAYGVLEDRYHTDMSIEEGADLAIRALHNAMKRDSASGNG 183
>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 92/188 (48%), Gaps = 4/188 (2%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+ G + V + K+ V +A D+R + A N KI ++ H+ + G D + +
Sbjct: 8 FKGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVR 67
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+R LY + ++MS K L +++N++ ++ PY +V G D +P + ++D
Sbjct: 68 LLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDE---KPKLYSVD 124
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
++G + + + G + Y + ++ ++ NL ++ + +A+ A +R+ SG G
Sbjct: 125 MVGGITEDK-YATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGI 183
Query: 186 VVYIIEQD 193
+V I ++
Sbjct: 184 LVVTITKE 191
>gi|195173300|ref|XP_002027430.1| GL20944 [Drosophila persimilis]
gi|194113282|gb|EDW35325.1| GL20944 [Drosophila persimilis]
Length = 224
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A+ GK+ V I D R L+ K+ + M V G D ++
Sbjct: 13 NGGTVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAATGCWCDAVSLTNL 72
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ +Q YE + ++ MS + + M+S + Y+RR PY V P++ G+D + + + + D
Sbjct: 73 LKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPILGGID-QDGQGAVFSYDC 131
Query: 127 IGCVNQPSDFVVGG------PCSDQLYG------MCETLWEPNLEPDDLFETIAQALVNA 174
IG + S V G P D G + ET +P L + A + A
Sbjct: 132 IGHFVRESSRVEGTAVGILQPVLDNQIGYTKKDLLDETSEQPALTKERALAIAKDAFITA 191
Query: 175 CERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ + +G ++ +I +D + V ++ D
Sbjct: 192 AQSDVFTGDSVIINVITKDSIKVEKMQLGKD 222
>gi|226489268|emb|CAX75778.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 10/207 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQG--TALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
NGG+++ ++G + IA D R G L+ N ++F++G +G G D T+
Sbjct: 8 NGGTVMGISGNDFALIASDTRL-CDGDFVILSRNCPRLFKLGRGNVLGCAGFHGDVLTLT 66
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE-----TAEP 119
+ + + Y + +S K L ++S LY RRF P++V ++VGLD + + +P
Sbjct: 67 KLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGDRGVLYSYDP 126
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWE-PNLEPDDLFETIAQALVNACERN 178
+G+ + G S + P D G + + L + + ++A ER+
Sbjct: 127 -VGSYEAEGYRASGSSAAILQPFLDSTVGNKTSKYHVSRLNKETAVKLTHDIFISAAERD 185
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
G G V+Y + +D ++ R D
Sbjct: 186 TQCGDGVVIYTVTKDGLSETSYPLRRD 212
>gi|449432245|ref|XP_004133910.1| PREDICTED: proteasome subunit beta type-1-like [Cucumis sativus]
Length = 223
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VA+ G + IA D R L ++ KI ++ + G D + + +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVLASSGFQADVKALQKA 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEP---------NLEPDDLFETIAQALV 172
G+ + +G Q S + P D L P E DL +T+
Sbjct: 134 GSYERVGYSAQGSGSTLITPFLDNQLKSPSPLLLPAQDSSTPLSEAEAIDLVKTV---FA 190
Query: 173 NACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ +G + ++ D + ++ R D
Sbjct: 191 SATERDIYTGDKLEIVVLNADGLRREYMNLRED 223
>gi|427787323|gb|JAA59113.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Rhipicephalus pulchellus]
Length = 232
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGSIVA+ G + IA D R K+F++ + +G G D T +
Sbjct: 27 NGGSIVAVAGDDFAVIASDSRLSSGYHIHTREQSKLFKLSNQCVLGSTGCWCDILTFTRF 86
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R +Y + ++ MS + +I MLY +RF PY++ ++ GLD E + I D
Sbjct: 87 LEARMKMYLHEHHKLMSTPAVAQLIVTMLYNKRFFPYYISNILAGLD-EEGKGCIYCYDP 145
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWE----PNLEP-----DDLFETIAQALVNACER 177
+G ++ + GG S L + + N++P + I ++A ER
Sbjct: 146 VGH-SERVQYRAGGSSSALLQPLLDNQIGFKNMENVKPEPPTRERAVNIIKDVFISAAER 204
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G +++II++D + + R D
Sbjct: 205 DIYTGDSVIIHIIDKDGIKEDKMPLRRD 232
>gi|282165069|ref|YP_003357454.1| proteasome subunit beta [Methanocella paludicola SANAE]
gi|302595754|sp|D1Z199.1|PSB_METPS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|282157383|dbj|BAI62471.1| proteasome subunit beta [Methanocella paludicola SANAE]
Length = 205
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
Y G + V + N + +A ++R + + + QKI+Q+ ++ + + G D Q + +
Sbjct: 6 YKGTTTVGIICNNGLVLATERRATMGNLIASRDAQKIYQLTDNIAMTIAGSVGDGQRLAR 65
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
++ L+EL+ + MS L ++SN+L+E R ++++ +V G+D + P + ++D
Sbjct: 66 MLQAESKLFELRRHGPMSINALSMLLSNLLWEYRI--FYIQVLVGGVDK--SGPKLFSLD 121
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
G F G S YG+ E ++ ++ + E A+AL +A +R++ SG G
Sbjct: 122 PAGGRITEVKFSSTGSGSPLAYGVLEDRYKQDMSVEQGVELAAKALESAMKRDSASGNGM 181
Query: 186 VVYIIEQDKVTV 197
+I KV +
Sbjct: 182 QFCVITPGKVEI 193
>gi|308807300|ref|XP_003080961.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
gi|116059422|emb|CAL55129.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
Length = 233
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A+ G++ V A D R L F+KI ++ + G A D T+ +
Sbjct: 24 NGGTVLAVAGESYVICAGDTRMSSGYNILTRKFEKIDKMSGKTLMASAGFAADAVTLKKT 83
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
++ R YE + R++ M+SN LY RRF PY+ +V GLD E + +
Sbjct: 84 LKARCKQYEFQNKREIGCVAFAQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAVFTYDAV 143
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + Q S + P D L P L + + I A
Sbjct: 144 GSYERTNYSCQGSGQALIMPVLDNQLKTVSPLVLPAASSATPLSEQEAIDLIKDCFATAA 203
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++I+ + V + R D
Sbjct: 204 ERDIYTGDSVELWIMNAEGVRKEEMALRAD 233
>gi|119567805|gb|EAW47420.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_a [Homo sapiens]
Length = 219
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 10 SIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRF 69
+I+A+ G++ +A D R + + K +++ +G G D T+ + I
Sbjct: 17 TILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEA 76
Query: 70 RQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGC 129
R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + + D +G
Sbjct: 77 RLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE-GKGAVYSFDPVGS 135
Query: 130 VNQPSDFVVGGPCSDQL---------YGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ S F GG S L + + + L D + ++A ER+
Sbjct: 136 YQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVY 194
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+G + I+ ++ + V R D
Sbjct: 195 TGDALRICIVTKEGIREETVSLRKD 219
>gi|322370361|ref|ZP_08044920.1| proteasome endopeptidase complex, beta subunit [Haladaptatus
paucihalophilus DX253]
gi|320550069|gb|EFW91724.1| proteasome endopeptidase complex, beta subunit [Haladaptatus
paucihalophilus DX253]
Length = 240
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V +A D R + G +++ N QK+ Q+ + + G Q+ + +R NLYE
Sbjct: 55 DGVVMATDMRASLAGRFVSNKNVQKVEQIHPTAALTMAGSVGGAQSFIRTMRIESNLYES 114
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ +MS + L + NML R GP+F V P++ G+D E + I ++D G V D
Sbjct: 115 RRGEQMSMQALSTLAGNML---RGGPFFMVSPILGGIDEEGSH--IYSLDPAGGV-MSDD 168
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG+ E +E L ++ A+ + +A ER+ SG G + I ++ V
Sbjct: 169 YTVTGSGMQLAYGVLEQDYEEGLSNEEAKMVAARGIKSAVERDTGSGNGVFLAEITEEGV 228
Query: 196 TV 197
+
Sbjct: 229 DI 230
>gi|116780814|gb|ABK21828.1| unknown [Picea sitchensis]
gi|116783100|gb|ABK22793.1| unknown [Picea sitchensis]
gi|224284319|gb|ACN39895.1| unknown [Picea sitchensis]
gi|224285431|gb|ACN40438.1| unknown [Picea sitchensis]
Length = 229
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ +A+ G N IA D R + L ++ KI + + G D + + +
Sbjct: 20 NGGTCIAIAGSNYCVIAADTRMSTGYSILTRDYSKICNLADKCVMASSGFQADVKALQKN 79
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 80 LSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYDAV 139
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + +G Q + + P D L P L + + + +A
Sbjct: 140 GSYERVGYGAQGTGGTLMMPVLDNQLKSPSPLLLPAQDATTPLSESEAVDLVKDVFASAA 199
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G G + ++ + V ++ R D
Sbjct: 200 ERDIYTGDGLEIVVVNAEGVKREFLELRRD 229
>gi|297527496|ref|YP_003669520.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256412|gb|ADI32621.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 215
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 101/205 (49%), Gaps = 7/205 (3%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQT 62
+M+ G+++ + N + IA +KR G L+ N +K+ + H+ +G GL D Q
Sbjct: 14 VMSSLPGTVLGIKANNGIVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQF 73
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
+ + +R Y+L+ R++ + L ++S +LY + P E +V G D + P I
Sbjct: 74 IIRALRLEAENYKLQLEREIRVRGLAKILSLLLYSYKLAPLMTEIVVGGYDDKG--PQIY 131
Query: 123 NMDLIGCVNQPSDFVV--GGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+D +G + + + GGP + G+ E + +++ D+ + A+ A ER+AV
Sbjct: 132 VLDPVGSLIEDKYVALGSGGPIA---LGIIEKEYREDIDIDEAEKLAVSAIREAIERDAV 188
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
SG G V I ++ ++R R +
Sbjct: 189 SGDGVDVLRITEEGYSLREYMFRRE 213
>gi|167044620|gb|ABZ09292.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG7F19]
Length = 199
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 4/192 (2%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
M+ M G + V +T V A ++R ++ +K F + + GL D
Sbjct: 1 MTAMYMPGATAVGITYDEGVVFASERRIAYGNFVVSKTTKKTFVITPQVGAACAGLVADM 60
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI 120
Q + +I + +++ R++ P + M+SNM+YERRF P + +V GL +P+
Sbjct: 61 QILSLQISALAKIRKMEIKREVPPNTIAKMMSNMMYERRFFPLLTQVIVGGL---VDKPV 117
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
I +D +G V P D+ G ++ G+ + ++ L + + +++ A R++
Sbjct: 118 IYTLDPLGSV-LPDDYAAVGTGAEMALGILDQQYKKELNETEATDLAVKSIRAAILRDSA 176
Query: 181 SGWGAVVYIIEQ 192
SG V +I +
Sbjct: 177 SGDNIDVLVINK 188
>gi|70954344|ref|XP_746223.1| proteasome subunit beta type 1 [Plasmodium chabaudi chabaudi]
gi|56526764|emb|CAH76320.1| proteasome subunit beta type 1, putative [Plasmodium chabaudi
chabaudi]
Length = 252
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY-- 64
NGG+++ +TGK+ V +A D R + + N KI ++ +G G+ +D +T++
Sbjct: 38 NGGTVIGLTGKDYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSL 97
Query: 65 ------QKIRFRQN--LYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPET 116
+K+R + L+ L+ + S V+ ++ LY RRF PY+ ++ G+D E
Sbjct: 98 LQVCYSKKLRKHKKIQLFYLEHSHYPSVHVIAKLLCVTLYSRRFFPYYTFNILAGID-EN 156
Query: 117 AEPIIGNMDLIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPNLEPDDLFETIAQ 169
+ ++ + D IG Q + G S +++ + + + D +
Sbjct: 157 GKGVLYSYDAIGSYYQSTHACTGSGSSLILPILDNRVEQKNQLIKNMDFNLGDDINFVKD 216
Query: 170 ALVNACERNAVSGWGAVVYIIEQ 192
A+ +A ER+ +G A +YII+
Sbjct: 217 AMTSATERDIYTGDQAEIYIIDN 239
>gi|342182103|emb|CCC91582.1| proteasome beta 6 subunit [Trypanosoma congolense IL3000]
Length = 258
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 13/215 (6%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRF-GIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S T NGG+I A+ G++ + D R G + K+FQ+ +++ G+ D
Sbjct: 46 SPYTDNGGTIAAIAGRDFAILGADTRLNGDFCIHTRMDTSKLFQLTDRVFLASSGMQADR 105
Query: 61 QTVYQKIRFRQNLYELKENRKM-SPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
+ + +++R Y K S K + ++S +LY+RRF PY+ M+VGLD E
Sbjct: 106 LQLQRMLQYRIQWYRYNNGGKTPSTKAIAKLVSTVLYQRRFFPYYTFNMIVGLD-EQGAG 164
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWE---------PNLEPDDLFETIAQA 170
+ + D +G +PS + G S + + + L P L +++ + A
Sbjct: 165 VCYSYDAVGST-EPSRYGTCGSASSFVEPLMDCLLTRQHMVTSVPPELSVEEVLGMMKDA 223
Query: 171 LVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A ER+ +G ++I + + + R D
Sbjct: 224 FTGAAERDIFTGDSVCFHVITAEGIRTEMFELRKD 258
>gi|384253987|gb|EIE27461.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 249
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 15/197 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A R + L+ + + ++ + + PG D +T+++
Sbjct: 40 NGGTCVAVAGNDYCIVASSTRLSTGFSILSRDVSMVLKLSDKLMILSPGFQADAKTLHKV 99
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R Y+ R MS ++ N LY +RF PY+ + GLD E + + + D
Sbjct: 100 LQQRYIRYQFDHGRPMSVAACAQLLGNTLYYKRFFPYYTFNICAGLD-EEGKGAVYSYDA 158
Query: 127 IGCVNQPSDFVVGGPCSD--------QLYGMCETL-----WEPNLEPDDLFETIAQALVN 173
IG ++ S + V G D QL + W +L D + + A V+
Sbjct: 159 IGS-HERSGYAVQGSGKDLIQPVLDNQLKAASPLVLPPENWMSSLPLDQAVDLVRDAFVS 217
Query: 174 ACERNAVSGWGAVVYII 190
A ER+ +G +YI+
Sbjct: 218 AGERDIYTGDAVEIYIM 234
>gi|332796202|ref|YP_004457702.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
gi|332693937|gb|AEE93404.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
Length = 209
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 95/189 (50%), Gaps = 12/189 (6%)
Query: 3 IMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQ 61
I T+ G + V + K+ V +A D+R +G +A+ +KI + ++ + G D Q
Sbjct: 6 IKTWKGTTTVGILAKDGVVLAADRR-ASEGFFVANKMVRKILYITDNIGITTAGSVADLQ 64
Query: 62 TVYQKIRFRQNLYE---LKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAE 118
+Y ++ NLY + NR + K L ++N L + ++ PY V+ ++ G D +
Sbjct: 65 FLYYVLK---NLYHYNYISGNRPTTVKALATYLANTLSQNKYFPYLVQILIGGYD---TQ 118
Query: 119 PIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERN 178
P + N+D G + + +V G S G+ E + +L D + A+A+++A +R+
Sbjct: 119 PRLYNLDYFGDMTEEK-YVATGSGSPVAMGVLEDEYREDLTADQAMDIAARAVLSAIKRD 177
Query: 179 AVSGWGAVV 187
+ +G G +V
Sbjct: 178 SYTGTGVIV 186
>gi|380018248|ref|XP_003693045.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Apis florea]
Length = 237
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 7 NGG-SIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG S++A+ G N IA D R + QK+ + S +G G DT T+ +
Sbjct: 31 NGGKSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLXPLSSKTVLGCSGCWCDTLTLTR 90
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ R +YE + ++M + M+S MLY +RF PY+V ++ GLD E + + + D
Sbjct: 91 ILSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLD-ENGKGCVYSYD 149
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLW----EPNLEPDDLFETIAQALV-----NACE 176
IG + + + GG L + + + +EP L + A A++ +A E
Sbjct: 150 PIGHC-EITKYRAGGSAGALLQPLLDNQIGYKNQEGVEPVPLTQERAVAIIKDVFTSAAE 208
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G + II D + R D
Sbjct: 209 RDIYTGDSIFIKIITSDGIQNFSFALRKD 237
>gi|448585472|ref|ZP_21647865.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
gi|445726172|gb|ELZ77789.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
Length = 243
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 6/196 (3%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V + ++ V +A D R + + + QK+ ++ + + G + Q++
Sbjct: 46 TKTGTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLI 105
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+R LYE + MS + L ++ N L R G Y V+P++ G+D ET P I ++
Sbjct: 106 SSLRAEVRLYEARRGEDMSMQALSTLVGNFL--RSGGFYVVQPILGGVD-ETG-PHIYSI 161
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + + ++ V G S G+ E +E L D+ + +A+ +A ER+ SG G
Sbjct: 162 DPAGSILE-EEYTVTGSGSQYALGVLEQEFEDGLSIDEAKQVATKAIRSAVERDLASGNG 220
Query: 185 AVVYIIEQDKVTV-RH 199
+ ++ +D V + RH
Sbjct: 221 INIAVVTEDGVDIQRH 236
>gi|224067752|ref|XP_002302536.1| predicted protein [Populus trichocarpa]
gi|118484887|gb|ABK94310.1| unknown [Populus trichocarpa]
gi|222844262|gb|EEE81809.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 11/211 (5%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+ VA+ G + +A D R L ++ KI+++ + G D + + +
Sbjct: 13 FNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKIYKLADKCLMASSGFQADVRALQK 72
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI----- 120
+ + +Y+ + N++MS + ++SN LY +RF PY+ ++VG D E +
Sbjct: 73 VLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYDA 132
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNA 174
+G+ + +G Q S + P D L P L + + + +A
Sbjct: 133 VGSYEKVGYSAQGSGAKLIMPVLDNQLKSPSPLLLPAQDAVTPLSEAEAIDVVKDVFASA 192
Query: 175 CERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + I+ D + + + R D
Sbjct: 193 TERDIYTGDKLEIVILNADGMRREYAELRKD 223
>gi|448729804|ref|ZP_21712116.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
gi|445794125|gb|EMA44678.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
Length = 237
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 7/184 (3%)
Query: 20 VAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKEN 79
V +A D+R + +KI ++ + + G + Q + +R +LYE + +
Sbjct: 55 VVLATDRRASFGNMVSSKQAKKIAEIHPRGALTISGAVSPAQALISNLRAEVDLYEARRS 114
Query: 80 RKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVV 138
+MS + L + SN L R G +F V P++ G+D E + I ++D G V + D+
Sbjct: 115 EEMSMQALSTLTSNFL---RSGAFFIVHPILGGVDDEGSH--IYSIDPSGSVME-EDYNA 168
Query: 139 GGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVR 198
G S YG+ E +E L D+ A A+ +A ER+ SG G +V I + VT
Sbjct: 169 TGSGSPFAYGVLEQQYEEGLSNDEAETVAAHAVKSAVERDTASGNGIIVSTITDEGVTTE 228
Query: 199 HVKT 202
++
Sbjct: 229 EYES 232
>gi|448603032|ref|ZP_21656853.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|448624647|ref|ZP_21670595.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
gi|445746228|gb|ELZ97690.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|445749852|gb|EMA01294.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
Length = 243
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 6/196 (3%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V + ++ V +A D R + + + QK+ ++ + + G + Q++
Sbjct: 46 TKTGTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLI 105
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+R LYE + MS + L ++ N L R G Y V+P++ G+D ET P I ++
Sbjct: 106 SSLRAEVRLYEARRGEDMSMQALSTLVGNFL--RSGGFYVVQPILGGVD-ETG-PHIYSI 161
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + + ++ V G S G+ E +E L D+ + +A+ +A ER+ SG G
Sbjct: 162 DPAGSILE-EEYTVTGSGSQYALGVLEQEFEDGLSIDEAKQVATKAIRSAVERDLASGNG 220
Query: 185 AVVYIIEQDKVTV-RH 199
+ ++ +D V + RH
Sbjct: 221 INIAVVTEDGVDIQRH 236
>gi|225453909|ref|XP_002279266.1| PREDICTED: proteasome subunit beta type-1 [Vitis vinifera]
gi|296089152|emb|CBI38855.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VA+ G + IA D R L ++ KI ++ + G D + + +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICKLADKCVMASSGFQADVRALQKH 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNL-------EPD--DLFETIAQALV 172
G+ + +G +Q S + P D L P L EP+ DL +T+
Sbjct: 134 GSYEKVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPALDAVTPLSEPEAVDLVKTV---FA 190
Query: 173 NACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ +G + I+ + ++ R D
Sbjct: 191 SATERDIYTGDKLEIVILNASGIRREYMDLRKD 223
>gi|414869634|tpg|DAA48191.1| TPA: proteasome subunit beta type [Zea mays]
Length = 219
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ +A+ G + +A D R I + L+ + KI Q+ + G D + + +
Sbjct: 10 NGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLASSGFQGDIKALQKA 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ ++ +YE N+KMS + ++SN LY +RF PY+ ++ GLD + + +
Sbjct: 70 LAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCVFTYDAV 129
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + G Q + + P D L P L D + + +A
Sbjct: 130 GSYERTGYSAQGTGSALMMPVLDNQLKSPSPLLLPARDAVTPLSESDAVDLVKDVFASAT 189
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I + +++ R D
Sbjct: 190 ERDIYTGDRLEIVVINKSGTHREYIELRKD 219
>gi|197129777|gb|ACH46275.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 149
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S T+NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 27 FSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDC 86
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E
Sbjct: 87 LTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 141
>gi|118488258|gb|ABK95948.1| unknown [Populus trichocarpa]
Length = 223
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 11/211 (5%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+ VA+ G + +A D R L ++ KI ++ + G D + + +
Sbjct: 13 FNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKICKLADKCLMASSGFQADVKALQK 72
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI----- 120
+ + +Y+ + N++MS + ++SN LY +RF PY+ ++VG D E +
Sbjct: 73 VLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYDA 132
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEP------DDLFETIAQALVNA 174
+G+ + +G Q S + P D L P L+ + + + +A
Sbjct: 133 VGSYEKVGYSAQGSGAKLIMPVLDNQLKSPSPLLLPALDAVTPLTEAEAIDVVKDVFASA 192
Query: 175 CERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + I+ D + + + R D
Sbjct: 193 TERDIYTGDKLEIVIVNADGIRREYAELRKD 223
>gi|315426587|dbj|BAJ48216.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485345|dbj|BAJ50999.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 187
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 10 SIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRF 69
+IV + + V +A D+R + QKI +V + + + GL +D + +R
Sbjct: 3 TIVGLKAVDGVVLASDRRASKGFFIASKTTQKIMKVDDSLAIAVAGLLSDAVYLVNVVRA 62
Query: 70 RQNLYELKENRKMSPKVLLAMISNMLYE--RRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ L L+ +S +ISN+ Y R + PY+ E +V G+D E P + + D+
Sbjct: 63 ERKLIALRRGYPLSVAESSKLISNLFYSGLRNYIPYYAELIVAGVDDEG--PHVFSSDMS 120
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + +FV G S YG+ E+L+ P L+ ++ +A+ A +R+ SG G V
Sbjct: 121 GSM-VAEEFVSSGSGSPVAYGVLESLYTPGLKLEEARAIAVKAVEAAMQRDPGSGNGVDV 179
Query: 188 YIIE 191
I+
Sbjct: 180 LAIQ 183
>gi|356526807|ref|XP_003532008.1| PREDICTED: proteasome subunit beta type-1-like [Glycine max]
Length = 223
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VA+ G + IA D R L ++ KI Q+ + G D + + +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKCVMASSGFQADVKALQKV 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEP---------NLEPDDLFETIAQALV 172
G+ + +G +Q S + P D L P E DL +T+
Sbjct: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTV---FA 190
Query: 173 NACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ +G + I+ + ++ R D
Sbjct: 191 SATERDIYTGDKVEIVILNASGIHREYMDLRKD 223
>gi|296242989|ref|YP_003650476.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095573|gb|ADG91524.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 202
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Query: 9 GSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIR 68
G+ + + + V +A +KR G L+ + +K++ + H+ VG GL D + + +
Sbjct: 6 GTAIGVKTREGVVLASEKRLTYDGFVLSSSVKKVYAITPHVGVGFAGLMGDVNILKRMLE 65
Query: 69 FRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIG 128
YEL+ R++ + L M+S +LY + P E +V G D + I +D +G
Sbjct: 66 MEAKYYELQHGREIRVRGLAKMLSVILYSYKLAPMLTEIVVGGYDDNGPQLYI--LDPVG 123
Query: 129 CVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
+ + + G + G E + P++ ++ + + +A+ ER+ +SG G
Sbjct: 124 SLIE-EKYAALGSGAQLALGYIEPRYNPDISLEEAEKLVVEAVKTVIERDVLSGDG 178
>gi|388505884|gb|AFK41008.1| unknown [Lotus japonicus]
Length = 223
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VA+ G + IA D R L + KI Q+ + G D + + +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKISQLAEKSVMASSGFQADVKALQKV 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEP---------NLEPDDLFETIAQALV 172
G+ + +G +Q S + P D L P E DL +T+
Sbjct: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSETEAVDLVKTV---FA 190
Query: 173 NACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ +G + I+ + +++ R D
Sbjct: 191 SATERDIYTGDKLEIVILNASGIRREYMELRKD 223
>gi|242049776|ref|XP_002462632.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
gi|241926009|gb|EER99153.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
Length = 221
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L + KI + + G D + +++
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALHKN 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R+ LY+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 131
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + G Q + + P D L P L + + + +A
Sbjct: 132 GSYERTGYSAQGTGSTLMMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFASAT 191
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I + +++ R D
Sbjct: 192 ERDIYTGDKLEIVVINKAGTKREYIELRKD 221
>gi|61612096|gb|AAX47290.1| proteasome beta 1 subunit [Clonorchis sinensis]
Length = 217
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 8/207 (3%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTAL--ADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
NGG+++ ++G + +A D R + + N ++++G+ + G D T+
Sbjct: 11 NGGTVMGISGDDFALLASDTRLCAEDRYFIYSRNSPHLYKMGNGKVLATTGFHGDVLTLT 70
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI---- 120
+ + R Y +++S A++S LY RRF P++V ++ GLD E +
Sbjct: 71 KLLENRVKTYRYDHGKEISTNAFAALLSVTLYTRRFFPFYVSSILGGLDEEGRGAVYRYD 130
Query: 121 -IGNMDLIGCVNQPSDFVVGGPCSD-QLYGMCETLWEPNLEPDDLFETIAQALVNACERN 178
+G+ + + C S V+ P D ++ G + P LE + + ++A ER+
Sbjct: 131 PVGSFERVKCAAAGSSGVILQPFLDHRVEGKNLSSGLPPLEKAEAIKLAKDIFISAAERD 190
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
G ++ +I +D + H R D
Sbjct: 191 INCGDAVLIQVITRDGIEEFHFPLRRD 217
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V +T K+ + A ++R + KIF++ H+ + G +D Q + I
Sbjct: 9 GTTTVGVTCKDGIVFATERRASMGNLIAHKVADKIFKIDDHIGATIAGSVSDAQKLMGYI 68
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
LY L+ MS + M SN+L+ RF PY+V+ ++ G+D + P + ++D
Sbjct: 69 SAEVALYRLRNGAPMSVEAAANMTSNILHASRFYPYYVQTLLGGVDEKG--PALFSLDPS 126
Query: 128 GCVNQPSDFVVG-GPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + D ++ G S YG+ E + ++ ++ + +A+ A ER+ SG G
Sbjct: 127 GGVIK--DLMISTGSGSPVAYGVLEDRYNQEMDIEEGTSVVIRAIKAAMERDTYSGNGIK 184
Query: 187 VYIIEQDK 194
V I +++
Sbjct: 185 VATITKEE 192
>gi|19115641|ref|NP_594729.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe 972h-]
gi|17380232|sp|Q9UQY2.1|PSB6_SCHPO RecName: Full=Probable proteasome subunit beta type-6
gi|5734483|emb|CAB52716.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe]
gi|6681370|dbj|BAA88692.1| catalytic subunit (C5) of proteasome [Schizosaccharomyces pombe]
Length = 225
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+ VA+ G +A D R + G + FQ ++ +VG + +G G D + +
Sbjct: 12 NGGTTVAIAGDGFAILAGDTR-SVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVK 70
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
+I+ R +LY RKMS + M+ +LY +RF PY+V V G+D E
Sbjct: 71 RIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKE 120
>gi|408382617|ref|ZP_11180160.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
gi|407814693|gb|EKF85317.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
Length = 208
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 5/187 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V +T K+ V A + R + KIF++ H+ + G +D Q++ + I
Sbjct: 9 GTTTVGLTCKDGVVFATETRATMGNLVAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKYI 68
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
R L+ L+ ++++ + + SN+L+ R P++V+ ++ G+D + P + ++D
Sbjct: 69 RAEVALFRLRNGKRINVEAAATLTSNILHSSRGYPFYVQTLLGGVDDKG--PALYSLDPT 126
Query: 128 GCVNQPSDFVVG-GPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + D V+ G S YG+ E + +L ++ + +A+ +A ER+ SG +
Sbjct: 127 GGVIK--DLVISTGSGSPVAYGVLEDRYSQDLYVEEGIDVAIRAIKSAMERDTYSGNSIL 184
Query: 187 VYIIEQD 193
V I ++
Sbjct: 185 VATITEE 191
>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 219
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + A+T K+ V +A D R G +AD + KI +V H+ + + G D Q +
Sbjct: 19 GTTTCALTCKDGVVLAADTR-ASAGLFIADRHVMKIQKVDQHLAMTIAGGVADAQNLVDT 77
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R+ NLY + M K + SN+L+ +R+ PY+V+ ++ G I N+DL
Sbjct: 78 MRYNANLYRFQNKELMPVKSAARLCSNILFNQRYFPYYVQIIMAGYTKNEGSQ-IHNIDL 136
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G + F+ G S YG E+ + + +D ++ QA+ A RNA +G
Sbjct: 137 FGSMT-TEKFISTGSGSPVAYGYLESEYRDGMSVNDAYKVAMQAIAAAIRRNAGTGDSIN 195
Query: 187 VYIIEQD 193
V II+++
Sbjct: 196 VVIIDKN 202
>gi|71028614|ref|XP_763950.1| proteasome beat subunit [Theileria parva strain Muguga]
gi|68350904|gb|EAN31667.1| proteasome beat subunit, putative [Theileria parva]
Length = 218
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 10/207 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A T N IA D R + K+F++ +G G+ D +
Sbjct: 14 NGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQSV 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + LY NR+ + + ++S +LY RRF PY+ ++ G+D E + ++ D
Sbjct: 74 LERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGID-EQGKGVVCGYDA 132
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPN---LEP-----DDLFETIAQALVNACERN 178
+G N + G S + + + L N ++P +DL + A+V+A ER+
Sbjct: 133 VGNYNYEK-YTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLVKNAMVSAVERD 191
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G A + I + + H+ R+D
Sbjct: 192 ICTGDSAELVICDGVVMEPVHMDLRID 218
>gi|410721909|ref|ZP_11361231.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
gi|410598027|gb|EKQ52619.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
Length = 209
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQ 65
G + V +T K+ V A + R G +A KIF++ H+ + G +D Q++ +
Sbjct: 8 KGTTTVGLTCKDGVVFATETR-ATMGNLIAHKVADKIFKIDDHIGTTIAGAVSDAQSLMK 66
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
IR L+ L+ ++++ + + SN+L+ R P++V+ ++ G+D + P + ++D
Sbjct: 67 YIRAEVALFRLRNGKRINVEAAATLTSNILHSSRGYPFYVQTLLGGVDDKG--PALYSLD 124
Query: 126 LIGCVNQPSDFVVG-GPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
G V + D ++ G S YG+ E + +L ++ + +A+ +A ER+A SG
Sbjct: 125 PTGGVIK--DLMISTGSGSPVAYGVLEDRYSEDLYVEEGIDVAIRAIKSAMERDAYSGNS 182
Query: 185 AVVYIIEQ----DKVTVRHVKTRM 204
+V I + K++ VK ++
Sbjct: 183 ILVATITEAEGFKKLSEEEVKAKI 206
>gi|328766922|gb|EGF76974.1| hypothetical protein BATDEDRAFT_92136 [Batrachochytrium
dendrobatidis JAM81]
Length = 231
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 23/220 (10%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATD 59
S T NGG+ +A+ G + IA D R +G ++ + K+ ++ + + G+ D
Sbjct: 20 FSPYTDNGGTTLAIAGDDFCVIAGDTRQS-EGYSINTRYAPKVHEMRNGTVLATGGMFAD 78
Query: 60 TQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE---- 115
+QT+ ++I+ R Y+ + ++ MS + M+S +LY +RF PYF V GLD
Sbjct: 79 SQTLMKRIQQRLEWYQFQHDKNMSAPAMAQMLSTILYYKRFFPYFSWCSVGGLDEHGKGC 138
Query: 116 --TAEPIIGNMDLI--------GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFE 165
T +P +GN + + G + QP F+ + G ++L P+LE +
Sbjct: 139 VYTYDP-VGNYERVSWDCGGSAGKLIQP--FLDNQIGKHHMSGASKSL--PSLET--VKR 191
Query: 166 TIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ A +A ER+ +G +++I +D +T + ++D
Sbjct: 192 IVKDAFTSATERDIYTGDFLEIFVITKDGITKEMLPLKLD 231
>gi|294889359|ref|XP_002772773.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239877323|gb|EER04589.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 110
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 51/82 (62%)
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
+ + G + DF+V G ++QL G+ E+ W + P++L E + Q+L++ +R+ +SGW
Sbjct: 29 LSIPGTESTAPDFIVSGTATEQLMGVAESFWREGMGPEELAEVLGQSLLSGIDRDCLSGW 88
Query: 184 GAVVYIIEQDKVTVRHVKTRMD 205
G +VYI+ ++ + +K RMD
Sbjct: 89 GGMVYILTDKELITKTLKGRMD 110
>gi|315425045|dbj|BAJ46718.1| proteasome endopeptidase complex [Candidatus Caldiarchaeum
subterraneum]
Length = 187
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 5/183 (2%)
Query: 10 SIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRF 69
+IV + + V +A D+R + QKI +V + + + GL +D + +R
Sbjct: 3 TIVGLKAVDGVVLASDRRASKGFFIASKTTQKIMKVDDSLAIAVAGLLSDAVYLVNVVRA 62
Query: 70 RQNLYELKENRKMSPKVLLAMISNMLYE--RRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ L L+ +S +ISN+ Y R + PY+ E +V G+D E P + + D+
Sbjct: 63 ERKLIALRRGYPLSVAESSKLISNLFYSGLRNYIPYYAELIVAGVDDEG--PHVFSSDMS 120
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + +FV G S YG+ E+L+ P L+ ++ +A+ A +R+ SG G V
Sbjct: 121 GSM-VAEEFVSSGSGSPVAYGVLESLYTPGLKLEEARAIAVKAVEAAMQRDPGSGNGVDV 179
Query: 188 YII 190
I
Sbjct: 180 LAI 182
>gi|146304800|ref|YP_001192116.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595852|sp|A4YIE0.1|PSB1_METS5 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145703050|gb|ABP96192.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 217
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + K+ V +A D+R +KI + + + G D Q +Y
Sbjct: 21 GTTTVGLVVKDAVILAADRRASAGFFVANKMVRKIVYIDDRIGMTTAGSVADLQFIYN-- 78
Query: 68 RFRQNLYE---LKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ +N+Y + NR ++ K L ++N+L + ++ PY V+ ++ G D +P + N+
Sbjct: 79 -YMKNIYHYNLISGNRPVTVKSLATYLTNILSQNKYFPYLVQILMGGYD---TQPRLFNL 134
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D +G + + + +V G S G+ E + P+L D + A+A+++A +R++ +G G
Sbjct: 135 DYLGDMTEET-YVATGSGSPVAMGVLEDGYSPDLTGDQAMDLAARAVMSAIKRDSFTGTG 193
Query: 185 AVVYIIEQDKVTVRHV 200
+V I ++ R +
Sbjct: 194 VIVTKITKEGHVEREI 209
>gi|408405837|ref|YP_006863820.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408366433|gb|AFU60163.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 192
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 10 SIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQKIR 68
+IV + K V + DKR +G + QKI ++ + V + G +D + + + +
Sbjct: 3 TIVGIKTKEGVVLGSDKRAS-KGFFIGSKITQKIAKIDDTLAVAIAGQLSDAEYLIKVAK 61
Query: 69 FRQNLYELKENRKMSPKVLLAMISNMLYE--RRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ L EL+ ++ K +ISN+ Y + + PYFVE +V G+D E I D+
Sbjct: 62 AERRLIELRRGFPLTVKESARLISNLAYSGMKNYQPYFVELLVAGVDQEGGH--IYAADM 119
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G + DF G S YG+ E+++ + ++ + +A+ A ER+ SG G
Sbjct: 120 SGAITS-EDFASSGSGSPIAYGVLESMYHKEITNEEAKQVATKAVSAAMERDPGSGNGID 178
Query: 187 VYII 190
V +I
Sbjct: 179 VLVI 182
>gi|406602407|emb|CCH46023.1| Proteasome subunit beta type-1-A [Wickerhamomyces ciferrii]
Length = 242
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 23/218 (10%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+I+ + G++ +A D R + G ++ ++ K+F G ++ V G + D +
Sbjct: 29 NGGTILGIAGEDFSVLAGDTRHTV-GYSINSRYEPKVFDAGDNIVVSANGFSADGNALVS 87
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ + Y N+K+S I +MLY +RF PY+V ++ GLD E + + + D
Sbjct: 88 RFKNHLKWYHFNNNKKISLSSAARFIQHMLYGKRFFPYYVHTIIAGLDDE-GKGAVYSFD 146
Query: 126 LIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPN-----------LEPDDLFETI 167
+G + G S +Q+ + +EP L +++ + +
Sbjct: 147 PVGSYEREQCRAGGAAASLIMPFLDNQV--NFKNQYEPGTDGKVKKELKYLSLEEVIQLV 204
Query: 168 AQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A +A ER+ G G + I+ +D V + + D
Sbjct: 205 RDAFSSATERHIHVGDGLEILIVTKDGVRTEYFDLKRD 242
>gi|393794893|ref|ZP_10378257.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 210
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
+G + V + K+ V + D R +N KI ++ H + L G D Q +
Sbjct: 11 HGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDEHAGLTLAGGVADAQNIVDI 70
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R+ NL+ +++ +S L + S + ++ R P+ + +V G D P + N+D+
Sbjct: 71 LRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDANG--PALFNIDM 128
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + S +V G S YG+ E + P+L ++ + +A+ A RN +G G
Sbjct: 129 FGSVEKKS-YVTTGSGSPVAYGLLEEEYRPDLTVEEAKKIALRAVKAAIVRNIGTGDGIN 187
Query: 187 VYIIEQD 193
+ ++++D
Sbjct: 188 IAVMDKD 194
>gi|347522758|ref|YP_004780328.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459640|gb|AEM38076.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 211
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 4/193 (2%)
Query: 1 MSIMTYN-GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATD 59
MS Y G + V + K+ V +A +KR G ++ +K+F+V + + GL D
Sbjct: 1 MSYAEYGIGATTVGIRVKDGVVLASEKRVSYGGFIVSKAGKKVFKVTDRIGIAFAGLYAD 60
Query: 60 TQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
Q + + + YE+ + ++SN+LY + P+ E +V G+D +
Sbjct: 61 MQALARILSAEIQYYEVSTGKPARVYAAAKLLSNILYASKLIPFITEVLVGGVDETGSHL 120
Query: 120 IIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
+ MD +G V + D+ G + G+ E + ++ D+ E +A+ A ER+A
Sbjct: 121 YV--MDPVGSVIED-DYAALGSGAAIAIGILEANYRKDMSIDEAKELAEKAVRIAIERDA 177
Query: 180 VSGWGAVVYIIEQ 192
+SG G + +I++
Sbjct: 178 ISGDGIDILVIKR 190
>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
Length = 236
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 3/189 (1%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
Y G + V M K+ V +A DK+ N +KI ++ + + + GL D QT+
Sbjct: 29 YRGTTTVGMALKDFVVLAADKKATAGLYVAHKNVKKIVRLTENSAITIAGLVADAQTLAD 88
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
IR Y NR MS + + +++ +L E ++ P+ V+ ++ G D + ++D
Sbjct: 89 YIRAEAYYYYYINNRPMSIRSMASLLGLILNEYKYFPFIVQLILGGYDYYEGAKLF-SID 147
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVS-GWG 184
G V + + G S G+ E+ + P + DD + +A+ A R+ S G G
Sbjct: 148 YFGDVTEER-YTATGSGSPIAIGVIESGYRPEMSIDDAVSLVVKAVATASMRDVFSGGIG 206
Query: 185 AVVYIIEQD 193
V +I +D
Sbjct: 207 VDVVVIGKD 215
>gi|407463311|ref|YP_006774628.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046933|gb|AFS81686.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 210
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 91/187 (48%), Gaps = 3/187 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
+G + V + K+ V + D R +N KI ++ H + L G D Q +
Sbjct: 11 HGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDI 70
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R+ NL+ ++++ +S L + S + ++ R P+ + +V G D E P + N+D+
Sbjct: 71 LRYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDTEG--PALFNIDM 128
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + S +V G S YG+ E ++ +L ++ + +A+ A RN +G G
Sbjct: 129 FGSVEKKS-YVTTGSGSPVAYGLLEEEYKEDLTVEEAKKIALRAVKAAIVRNIGTGDGIN 187
Query: 187 VYIIEQD 193
+ ++++D
Sbjct: 188 IAVMDKD 194
>gi|224130004|ref|XP_002320726.1| predicted protein [Populus trichocarpa]
gi|222861499|gb|EEE99041.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 11/211 (5%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+ VA+ G + +A D R L ++ KI ++ + G D + + +
Sbjct: 13 FNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKICKLADKCLMASSGFQADVKALQK 72
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI----- 120
+ + +Y+ + N++MS + ++SN LY +RF PY+ ++VG D E +
Sbjct: 73 VLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYDA 132
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNA 174
+G+ + +G Q S + P D L P L + + + +A
Sbjct: 133 VGSYEKVGYSAQGSGAKLIMPVLDNQLKSPSPLLLPAQDAVTPLTEAEAIDVVKDVFASA 192
Query: 175 CERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + I+ D + + + R D
Sbjct: 193 TERDIYTGDKLEIVIVNADGIRREYAELRKD 223
>gi|254574222|ref|XP_002494220.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|238034019|emb|CAY72041.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|328353959|emb|CCA40356.1| 20S proteasome subunit beta 6 [Komagataella pastoris CBS 7435]
Length = 243
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+++ + G++ +A D R G ++ ++ K+F VG + + G A D + +
Sbjct: 30 NGGTVLGIAGEDFAILAGDTRH-TTGYSINSRYEPKVFSVGDELLITANGFAADGDALVK 88
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ R + Y + ++ K I ++LY +RF PY+V ++ GLD E + + + D
Sbjct: 89 RFRNQLKWYHFDHKKNLTIKSAARFIQHLLYGKRFFPYYVHTIIAGLDEE-GKGAVYSFD 147
Query: 126 LIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPN---------LEPDDLFETIAQ 169
+G + GG S +Q+ + + N L+ D++ +
Sbjct: 148 PVGSYEREQCRAGGGAASLIMPFLDNQVNFKNQMDPDSNGTAKKELKYLKLDEVISLVRD 207
Query: 170 ALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A +A ER+ G G + I+ +D V + + D
Sbjct: 208 AFSSATERHINVGDGLEILIVTKDGVRTEYYPLKKD 243
>gi|119567806|gb|EAW47421.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_b [Homo sapiens]
Length = 166
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+I+A+ G++ +A D R + + K +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
>gi|15790018|ref|NP_279842.1| proteasome subunit alpha [Halobacterium sp. NRC-1]
gi|10580444|gb|AAG19322.1| proteasome, subunit alpha [Halobacterium sp. NRC-1]
Length = 255
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G +IV +T ++ V +A D R + G +++ N QK+ ++ + + + G Q+ +
Sbjct: 60 GTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRS 119
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMD 125
+R NLYE + MS L M SN+L R GP+F V P++ G+D + + ++D
Sbjct: 120 LRAEANLYEARRGEYMSIDALSTMASNLL---RGGPFFRVVPILGGVDDDGGH--VFSLD 174
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
G + + G G+ E + +L D + A A+ +A ER+ SG G
Sbjct: 175 PAGS-SMSDTYTAQGSGMPYALGVLEQEYSEDLTMADAEQVAAHAVKSASERDTASGNGI 233
Query: 186 VVYIIEQDKVTV 197
+ I D +T
Sbjct: 234 HITKITHDGLTT 245
>gi|448727796|ref|ZP_21710145.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
gi|445789782|gb|EMA40461.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
Length = 228
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 5/182 (2%)
Query: 18 NCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELK 77
+ V +A D+R + +KI ++ + + G + Q + ++ +LYE +
Sbjct: 44 DGVVLATDRRASAGNLVASKRAKKIAEIHPRGALTISGAVSAAQALISNLQAEVDLYEAR 103
Query: 78 ENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFV 137
+MS + L + SN L F Y V+P++ G+D E A I ++D G V + ++
Sbjct: 104 RGEEMSMQALSTLTSNFLRSGAF--YIVQPILGGVDDEGAH--IYSIDPAGSVME-EEYD 158
Query: 138 VGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTV 197
G S YG+ E +E L D+ A+A+ +A ER+ SG G ++ I +D V +
Sbjct: 159 ATGSGSPFAYGVLEQQYEDGLSNDEARTVAARAVKSAVERDTASGNGIIISEITEDGVEI 218
Query: 198 RH 199
Sbjct: 219 EE 220
>gi|169235741|ref|YP_001688941.1| proteasome beta subunit [Halobacterium salinarum R1]
gi|302595858|sp|B0R4C8.1|PSB_HALS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595910|sp|Q9HR36.2|PSB_HALSA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|167726807|emb|CAP13593.1| proteasome beta subunit [Halobacterium salinarum R1]
Length = 243
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G +IV +T ++ V +A D R + G +++ N QK+ ++ + + + G Q+ +
Sbjct: 48 GTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRS 107
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMD 125
+R NLYE + MS L M SN+L R GP+F V P++ G+D + + ++D
Sbjct: 108 LRAEANLYEARRGEYMSIDALSTMASNLL---RGGPFFRVVPILGGVDDDGGH--VFSLD 162
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
G + + G G+ E + +L D + A A+ +A ER+ SG G
Sbjct: 163 PAGS-SMSDTYTAQGSGMPYALGVLEQEYSEDLTMADAEQVAAHAVKSASERDTASGNGI 221
Query: 186 VVYIIEQDKVTV 197
+ I D +T
Sbjct: 222 HITKITHDGLTT 233
>gi|119567807|gb|EAW47422.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_c [Homo sapiens]
Length = 147
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+I+A+ G++ +A D R + + K +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
>gi|315426612|dbj|BAJ48240.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 3/178 (1%)
Query: 17 KNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
K+ V +A D R +K+F + H+ + + G D QT+ I+ N Y++
Sbjct: 22 KDAVVVATDTRVTSGFFVAHRRGKKVFPLAPHVAITIAGRVADAQTLIDLIKANINYYQI 81
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDF 136
+ MS + + S++++ R+ P++ + ++ G+D E P + N+D G V +
Sbjct: 82 MRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEG--PHLYNLDPFGSVTE-EKL 138
Query: 137 VVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
+ G S YG+ E + +++ + E QA+ A R+A SG V + +DK
Sbjct: 139 IATGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKDK 196
>gi|242082111|ref|XP_002445824.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
gi|241942174|gb|EES15319.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
Length = 219
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L+ + KI Q+ + G D + + +
Sbjct: 10 NGGTCVAVAGADYCVVAADTRLSVGYSILSRDHSKIAQLADKCVLASSGFQGDIKALQKA 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ ++ +YE N+KMS + ++SN LY +RF PY+ ++ GLD + + +
Sbjct: 70 LTAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCVFTYDAV 129
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + G Q + + P D L P L D + + +A
Sbjct: 130 GSYERTGYSAQGTGSALMMPVLDNQLKSPSPLLLPARDAVTPLSESDAVDLVKDVFASAT 189
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I ++ R D
Sbjct: 190 ERDIYTGDRLEIVVINSSGTHRECIELRKD 219
>gi|357159246|ref|XP_003578386.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Brachypodium distachyon]
Length = 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L + KI ++ + G D + + +
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICELXRKCVIASSGFQGDIKALQKN 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE-----TAEPII 121
+ R+ LY+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSYDAV 131
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + G Q + + P D L P L + + + +A
Sbjct: 132 GSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAVDLVKDVFASAT 191
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I + +++ R D
Sbjct: 192 ERDIYTGDKVEIVVINKAGTRREYIELRKD 221
>gi|407465690|ref|YP_006776572.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407048878|gb|AFS83630.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 210
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
+G + V + K+ V + D R +N KI Q+ H + L G D Q +
Sbjct: 11 HGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQQIDQHAGLTLAGGVADAQNIVDI 70
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R+ NL+ +++ +S L + S + ++ R P+ + ++ G D P + N+D+
Sbjct: 71 LRYHSNLHRVEKQNSISIHSLARLCSLIFHQNRGYPFMADILLGGYDANG--PSLFNVDM 128
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + S +V G S YG+ E ++ +L ++ + +A+ A RN +G G
Sbjct: 129 FGSVEEKS-YVTTGSGSPVAYGLLEEEYKEDLTIEEAKQVALRAVKAAIVRNIGTGDGIN 187
Query: 187 VYIIEQD 193
+ I+++D
Sbjct: 188 IAIMDKD 194
>gi|414886159|tpg|DAA62173.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 234
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L + KI + + G D + +++
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALHKN 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
+ R+ LY+ + N++MS + ++SN LY +RF PY+ ++ GLD E
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSE 120
>gi|170291074|ref|YP_001737890.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595814|sp|B1L6X8.1|PSB2_KORCO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170175154|gb|ACB08207.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 198
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 20 VAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKEN 79
V +A D+R G L+ + +K+F + + V GL D Q + +++ +YEL+
Sbjct: 15 VVLAADRRVSYNGFILSKSARKVFLINERVGVSTAGLPGDFQELVDVLKYNITMYELENE 74
Query: 80 RKMSPKVLLAMISNMLYERRF-GPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVV 138
+ +P + ++S +LY+ RF G Y+ E +V G+D + P I +D G + + +F
Sbjct: 75 KAATPTNVAKLLSILLYQGRFSGIYYAELVVGGID--NSGPKIFVLDPAGGLME-ENFSA 131
Query: 139 GGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVR 198
G + G+ E ++ + + E +A+ A R+A+SG G + II +
Sbjct: 132 VGSGAQIATGILERFFKEGMSEKEAVELAERAMREAISRDALSGDGIDLLIITSKGSRME 191
Query: 199 HVKTR 203
+ R
Sbjct: 192 FIPVR 196
>gi|170291023|ref|YP_001737839.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595829|sp|B1L6S7.1|PSB1_KORCO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|170175103|gb|ACB08156.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 206
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQT 62
M G + V + KN V +A DKR GT +A K ++ + + GL D Q
Sbjct: 1 MLMKGTTTVGVKFKNGVIVASDKR-ATSGTFVASKSAVKTLKITDYAVATISGLVADGQY 59
Query: 63 VYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFV--EPMVVGLDPETAEPI 120
+ +R +LY L R +S + + +++ +L RR+ PYF+ + +V G+D E A
Sbjct: 60 LVNNVRTIADLYSLDTERPLSVRGIARILAFLL--RRYRPYFLLAQLIVGGVDREGAH-- 115
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ N+D G + + D++ G S + E+ + P+++ + + ++ A R+A
Sbjct: 116 LFNVDPFGTLTEE-DYLATGSGSPVAISVIESGYSPDMDRESALRLVISSMTAALSRDAA 174
Query: 181 SGWGAVVYIIEQDKV 195
+G G V +I+ V
Sbjct: 175 TGDGIDVVVIDDRGV 189
>gi|170061773|ref|XP_001866381.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
gi|167879878|gb|EDS43261.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
Length = 204
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 60/216 (27%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVG-------- 52
MSI+ YN IA D FG+Q +A +F+KIF++ HMY+G
Sbjct: 1 MSILAYN--------------IATDHMFGVQAQTIATDFEKIFEINPHMYLGGQPPDEHP 46
Query: 53 --LPGLATDTQTVYQKIRFRQNLYELKENR-KMSPKVLLAMISNMLYERRFGPYFVEPMV 109
P + + V + + ++ + ++S + L + RR GP V +
Sbjct: 47 DGAPAFSCPQEPVRGARKPPDDARTIRGHAVQLSVREALRAVLYRAGYRRTGPQVVRAVH 106
Query: 110 VGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQ 169
+ P+ S+Q +C NL A
Sbjct: 107 LQHGPDR-------------------------LSEQAERLCRGR---NL-------CRAA 131
Query: 170 ALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ALVNA + +A+SGWGA V+IIE++K+TV+ +KTRMD
Sbjct: 132 ALVNAFDWDAISGWGATVHIIEKEKLTVKKLKTRMD 167
>gi|374628281|ref|ZP_09700666.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
gi|373906394|gb|EHQ34498.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
Length = 206
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + V +A ++R + + +K++Q+ + + + G D Q + +
Sbjct: 10 KGTTTVGLLFDGGVVLATERRATMGNMIASKKAKKVYQIADRIGMTIAGGVGDAQQLARL 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ +L+ ++ R ++ ++SN+L + R PY+V+ +V G+D P I ++D
Sbjct: 70 MQVECSLFNIRRGRPIAVGAAATLLSNVLNQNRMFPYYVQLLVGGIDRYG--PSIYSVDA 127
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + V G S YG+ E +E + + + +AL +A +R++ SG
Sbjct: 128 LGGASPEDRIVATGSGSPFAYGVLEDRFEEGMSEKECLDLAIRALRSAMKRDSASGEDIS 187
Query: 187 VYIIEQDK 194
+ +I +DK
Sbjct: 188 IVVITKDK 195
>gi|414886158|tpg|DAA62172.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L + KI + + G D + +++
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALHKN 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R+ LY+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 131
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + G Q + + P D L P L + + + +A
Sbjct: 132 GSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFASAT 191
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I + ++ R D
Sbjct: 192 ERDIYTGDKLEIVVINKVGTKREYIDLRKD 221
>gi|79315846|ref|NP_001030905.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646592|gb|AEE80113.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + IA D R + L+ ++ KI ++ + G D + + +
Sbjct: 14 NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKV 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
++ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + +G Q S + P D L P L + + + +A
Sbjct: 134 GSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASAT 193
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ + + I++ D + + R D
Sbjct: 194 ERDIYTVNKLEIMILKADGIKTELMDLRKD 223
>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595719|sp|A9A2U7.1|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 210
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
+G + V + K+ V + D R +N KI ++ H + L G D Q +
Sbjct: 11 HGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDI 70
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R+ NL+ ++++ +S L + S + ++ R P+ + +V G D E P + N+D+
Sbjct: 71 LRYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDAEG--PALFNIDM 128
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + + +V G S YG+ E + +L ++ + +A+ A RN +G G
Sbjct: 129 FGSVEKKA-YVTTGSGSPVAYGLLEEEYREDLTVEEAKKIALRAVKAAIVRNIGTGDGIN 187
Query: 187 VYIIEQD 193
+ I+++D
Sbjct: 188 IAIMDKD 194
>gi|340345703|ref|ZP_08668835.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520844|gb|EGP94567.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 210
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
+G + V + K+ V + D R +N KI ++ +H + L G D Q +
Sbjct: 11 HGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDAHAGLTLAGGVADAQNIVDI 70
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R+ NL+ +++ +S L + S + ++ R P+ + +V G D P + N+D+
Sbjct: 71 LRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDANG--PALFNIDM 128
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V Q S +V G S YG+ E + +L ++ + +A+ A RN +G G
Sbjct: 129 FGSVEQKS-YVTTGSGSPVAYGLLEEEYRSDLTVEEAKKIALRAVKAAIVRNIGTGDGIN 187
Query: 187 VYIIEQD 193
+ ++++D
Sbjct: 188 IAVMDKD 194
>gi|115480019|ref|NP_001063603.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|17380182|sp|O64464.1|PSB1_ORYSJ RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3138799|dbj|BAA28276.1| beta 6 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113631836|dbj|BAF25517.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|125606253|gb|EAZ45289.1| hypothetical protein OsJ_29931 [Oryza sativa Japonica Group]
gi|215686333|dbj|BAG87594.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736983|dbj|BAG95912.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + L + KI ++ + G D + +++
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKN 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R+ LY+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 131
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + G Q + + P D L P L + + + +A
Sbjct: 132 GSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASAT 191
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I + ++ R D
Sbjct: 192 ERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
>gi|366984552|gb|AEX09185.1| proteasome subunit beta type 1 [Gossypium hirsutum]
Length = 223
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VA+ G + IA D R L + KI ++ + G D + + ++
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKICKLADKCVMASSGFQADVRALQKQ 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVLTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEP---------NLEPDDLFETIAQALV 172
G+ + +G +Q S + P D L P E DL +T+
Sbjct: 134 GSYEKVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLVEAEAIDLVKTV---FA 190
Query: 173 NACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ +G + II + +++ R D
Sbjct: 191 SASERDIYTGDKLELVIINAAGIRREYMELRKD 223
>gi|414886160|tpg|DAA62174.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 152
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L + KI + + G D + +++
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALHKN 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
+ R+ LY+ + N++MS + ++SN LY +RF PY+ ++ GLD E
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSE 120
>gi|258564630|ref|XP_002583060.1| proteasome component C5 [Uncinocarpus reesii 1704]
gi|237908567|gb|EEP82968.1| proteasome component C5 [Uncinocarpus reesii 1704]
Length = 259
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 37/222 (16%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGS-------HMYVGLPGL 56
T NGGS + +TG N +A D R + G + F K+F++G+ H+ + + G
Sbjct: 34 TDNGGSTLGITGPNFAILAGDTR-SVSGYNINTRFAPKVFKIGADDAGEGGHIILSVVGF 92
Query: 57 ATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPET 116
+ D Q + +++ +YE + MS K +S +LY +RF PY+V ++ GLD E
Sbjct: 93 SADGQALKERLDAIVKMYEYHHGKPMSVKACAQRLSTILYSKRFFPYYVHAILGGLD-ED 151
Query: 117 AEPIIGNMDLIGC-----------------------VNQPSDFVVGGPCSDQLYGMCETL 153
+ + + D +G VN + +V D+L +
Sbjct: 152 GKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAERGDEL---VPRV 208
Query: 154 WEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
EP L D E + A +A ER+ G G II D +
Sbjct: 209 PEP-LSRDTALELVRDAFTSAVERHIEVGDGLQTMIITSDGI 249
>gi|57641364|ref|YP_183842.1| proteasome subunit beta [Thermococcus kodakarensis KOD1]
gi|74502448|sp|Q5JDJ9.1|PSB1_PYRKO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|57159688|dbj|BAD85618.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
Length = 203
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 4/187 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + K+ V +A D+R + L++ K+FQ+ H+ + G D ++ +
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSERVTKVFQIDDHLAIAGAGTVGDILSLVRL 65
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R LY K +R+MS K L + SN+L+ R Y +V G D + P + ++D
Sbjct: 66 LRAEAKLYRAKVSREMSVKALATLTSNILHSGRGFAYMAWFLVGGYD---SAPRLYSIDA 122
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + F G + + + E + + ++ + +A+ A +R+ +G G
Sbjct: 123 AGGVTEDR-FTAAGSGMEFAFSVLEENYRDGIPLEEGVKLALRAIKAATKRDVFTGGGVT 181
Query: 187 VYIIEQD 193
+ I ++
Sbjct: 182 LVTITEE 188
>gi|115477445|ref|NP_001062318.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|42407968|dbj|BAD09106.1| putative proteasome subunit beta type 1 [Oryza sativa Japonica
Group]
gi|113624287|dbj|BAF24232.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|215678609|dbj|BAG92264.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640910|gb|EEE69042.1| hypothetical protein OsJ_28037 [Oryza sativa Japonica Group]
Length = 219
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L+ + KI + + G D + + +
Sbjct: 10 NGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGDVKALQRN 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ ++ LYE N+KMS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 70 LTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 129
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + G Q + + P D L P L D + + +A
Sbjct: 130 GSYERTGYSAQGTGAALMMPVLDNQLKSPSPLLLPARDAVTPLSQSDAVDLVKDVFASAT 189
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I ++ R D
Sbjct: 190 ERDIYTGDKLEIVVINSAGSHREFIELRKD 219
>gi|260941638|ref|XP_002614985.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851408|gb|EEQ40872.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 241
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+++ + G++ +A D R + G + ++ KIF VG ++ + G A D +
Sbjct: 27 NGGTVLGIAGEDFAVLAGDTRI-VSGYNIDSRYEPKIFDVGDNIVMTANGFAADGAALID 85
Query: 66 KIRFRQNLYELKEN-RKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ R Y+ N +K++ + I ++LY +RF PY+V ++ GLD E + + +
Sbjct: 86 QFRSSFKWYKFDHNNKKLTIRSAARYIQHLLYGKRFFPYYVSTLIAGLD-EEGKGAVYSY 144
Query: 125 DLIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPN-----------LEPDDLFET 166
D +G + G S +Q+ + +EP L+ D++ +
Sbjct: 145 DPVGSYEREQCRAGGAAASLIMPFLDNQV--NFKNQYEPGSDGTKKKELRYLKLDEVLQL 202
Query: 167 IAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ A +A ER+ G G ++I+ +D V + + D
Sbjct: 203 VKDAFSSATERHIYVGDGLEIFIVTKDGVRKEYYPLKRD 241
>gi|268323699|emb|CBH37287.1| 20S proteasome, beta subunit [uncultured archaeon]
Length = 210
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + + + V +A +KR + + +KI+ V + + G+ D Q + +
Sbjct: 9 KGTTTIGLICGESVVLASEKRATMGSFIASKTAKKIYLVDDRIAMTTAGIVGDAQALVRI 68
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ LY+++ N M+ K + ++SN++ +R+ PY V+ ++ G+D + A + +D
Sbjct: 69 MTVELQLYKIRRNEPMTVKGISTLLSNVMNGQRYYPYIVQLLIGGIDRDGAH--LYTIDP 126
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G + S+ G S YG+ E + ++ + QAL +A +R++ SG
Sbjct: 127 FGGNTEESEIAATGSGSPIAYGVLENKYTKDISLEKGTALAIQALYSAIKRDSASGEAIE 186
Query: 187 VYIIEQDK 194
V I +D+
Sbjct: 187 VVTITKDR 194
>gi|218201500|gb|EEC83927.1| hypothetical protein OsI_30000 [Oryza sativa Indica Group]
Length = 219
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L+ + KI + + G D + + +
Sbjct: 10 NGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGDVKALQRN 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ ++ LYE N+KMS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 70 LAAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 129
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + G Q + + P D L P L D + + +A
Sbjct: 130 GSYERTGYSAQGTGAALMMPVLDNQLKSPSPLLLPARDAVTPLSQSDAVDLVKDVFASAT 189
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I ++ R D
Sbjct: 190 ERDIYTGDKLEIVVINSAGSHREFIELRKD 219
>gi|397575659|gb|EJK49816.1| hypothetical protein THAOC_31273 [Thalassiosira oceanica]
Length = 362
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 16/124 (12%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQ-------GTALADNFQKIFQVGSHMYVGLPGLAT 58
+NGGS++AM G N VAIA D RFG+ G + N + I S+ + GL
Sbjct: 86 FNGGSVLAMAGSNSVAIAVDTRFGLGFQTVHSLGDSDEGNPRIIHLPNSNTLMAWTGLYG 145
Query: 59 DTQTVYQKI------RFRQN---LYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMV 109
D + +++ +FR + + R PK + ++S++LY+RR PY+VEP+V
Sbjct: 146 DGLSFSEELNMIMGRQFRNEQILSFPNTKRRITGPKSIAMLMSHLLYQRRNAPYYVEPVV 205
Query: 110 VGLD 113
VGL+
Sbjct: 206 VGLE 209
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 119 PIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERN 178
P + D++G + S FV G S LYG E LW P+L ++L E +A ++A ER+
Sbjct: 271 PFLCTTDMLGAQSTSSSFVASGVASRSLYGTAEALWRPDLSGEELVEVCGRAFLSALERD 330
Query: 179 AVSGWGAVVYIIE 191
+SG+G V+Y+IE
Sbjct: 331 CLSGYGVVIYLIE 343
>gi|426355245|ref|XP_004045039.1| PREDICTED: proteasome subunit beta type-1 [Gorilla gorilla gorilla]
Length = 245
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+I+A+ G++ +A D R + + K +++ +G G D T+ +
Sbjct: 107 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 166
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E
Sbjct: 167 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 216
>gi|448472548|ref|ZP_21601172.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
gi|445819852|gb|EMA69686.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
Length = 243
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + ++ V +A D R + G + + QK+ ++ + + G + Q +
Sbjct: 48 TGTTTVGIRTEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMD 125
++ +LYE + + MS + L + N+L R G +F V+P++ G+D + A I ++D
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLL---RTGAFFIVQPILGGVDDDGAH--IYSID 162
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G + ++ V G S G+ E + ++ ++ A+A+ +A ER+ SG G
Sbjct: 163 ALGGTTE-EEYTVTGSGSQYALGVLEQEYHDDVTIEEAETIAAKAIQSAVERDLASGNGI 221
Query: 186 VVYIIEQDKVTVRHVK 201
V ++ D V + K
Sbjct: 222 NVAVVTDDGVDITRYK 237
>gi|299116145|emb|CBN76052.1| proteasome beta subunit [Ectocarpus siliculosus]
Length = 249
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG++VA+ G + IA D R T L+ N ++ ++ ++ G DTQ + +
Sbjct: 34 NGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLRL 93
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + YE+++ R M K + M+S LY RR P++ +V GLD E + G D
Sbjct: 94 LEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEEGIGAVYG-YDA 152
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETI 167
+G + GG S L +P L+ D E +
Sbjct: 153 VGSFERVRVACAGGGLS---------LMQPVLDRLDAAEAV 184
>gi|321260412|ref|XP_003194926.1| 20S proteasome beta-type subunit; Pre7p [Cryptococcus gattii WM276]
gi|317461398|gb|ADV23139.1| 20S proteasome beta-type subunit, putative; Pre7p [Cryptococcus
gattii WM276]
Length = 272
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGGSI+A+ GK+ IA D R +G ++ + +K++Q+ + + G A D +
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQS-EGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVK 88
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+++ R YE N+ MS K + MI MLY +RF PY+V ++ G++ E + + D
Sbjct: 89 RVKQRLEWYEHAHNKPMSLKSIARMIQTMLYGKRFFPYYVYNILGGIE-EDGSGAVYSFD 147
Query: 126 LIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEP--------NLEPDDLFETIAQA 170
+G + + G S +Q+Y EP NL + + +
Sbjct: 148 PVGSYEREACRAAGAAQSLIQPFLDNQVY-FKNQQPEPGAAPFVPGNLPLSTVLSLVVDS 206
Query: 171 LVNACERNAVSGWGAVVYII 190
+A ER+ G G +Y++
Sbjct: 207 FTSATERHIEVGDGMEIYVV 226
>gi|70606469|ref|YP_255339.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066683|ref|YP_007433765.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449068957|ref|YP_007436038.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
gi|121697373|sp|Q4JAY3.1|PSB1_SULAC RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|68567117|gb|AAY80046.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449035191|gb|AGE70617.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449037465|gb|AGE72890.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
Length = 195
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 12 VAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQ 71
+ + K+ V +A ++R L+ + +K+F++G G G+ D QT+ + +
Sbjct: 9 IGIKTKDGVVLAAERRLSYGDFVLSKSARKVFKLGRFGIAG-AGIVGDIQTLTRIMNVEI 67
Query: 72 NLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVN 131
YE+ +RK+S + ++S +LY+ + PY E + G+D + + I +D IG +
Sbjct: 68 KYYEMYNSRKISARAAAKLLSVILYQNKVLPYISELLFGGVDEDGPKLFI--LDPIGSLI 125
Query: 132 QPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIE 191
+ S VG + G+ E + +L + E +++ +A ER+ +SG G + II
Sbjct: 126 EDSYAAVGSGARVAI-GVLEAEYNESLTSEAAKELAIKSMKSAVERDVMSGDGIDILIIN 184
Query: 192 QDKVTVRHVK 201
++ + +K
Sbjct: 185 KNNIYEDFIK 194
>gi|154331019|ref|XP_001561949.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059271|emb|CAM36970.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 333
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 27/217 (12%)
Query: 7 NGGSIVAMTGKNCVAIACDKRF-GIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+ A+ G + V +A D R G + KIFQ+ H Y+ G+ D + Q
Sbjct: 126 NGGTTAAIAGNDFVLLAGDTRLNGNFCLHTRHDESKIFQLTPHTYMASNGMQADRLQLQQ 185
Query: 66 KIRFRQNLYELKENRKM-SPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE--------- 115
+++R Y+ K+ S K + ++S +LY RRF PY+ M+VGLD E
Sbjct: 186 LLKYRIKWYQYNNGGKVPSTKSIAQLLSTVLYHRRFFPYYTFNMIVGLDEEGHGVCYSYD 245
Query: 116 ---TAEPIIGNMDLIGCVNQPSDFVVGGPCSDQL----YGMCETLWEPNLEPDDLFETIA 168
+ EP+ L G + FV P D L + C+ E + ++ +
Sbjct: 246 AVGSTEPL-----LYGTRGSAASFV--EPLLDCLINRQHMTCQAPSE--MSKEEALVMLK 296
Query: 169 QALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A A ER+ +G I +D V R D
Sbjct: 297 NAFTGAAERDIYTGDSVSFITITKDGVQQESFALRKD 333
>gi|210075667|ref|XP_502489.2| YALI0D06523p [Yarrowia lipolytica]
gi|199425772|emb|CAG80677.2| YALI0D06523p [Yarrowia lipolytica CLIB122]
Length = 248
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+++ + G + +A D R G ++ +Q K+F VG ++ V G + D + +
Sbjct: 43 NGGTVLGIAGDDFALLAGDTR-NTTGYSINSRYQPKVFDVGDNILVTANGFSADGDALIE 101
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
I+ LY + N+ + + I +MLY +RF PY+V ++ GLD E + + + D
Sbjct: 102 NIKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLD-EEGKGAVYSYD 160
Query: 126 LIGCVNQPSDFVVGG--------PCSDQLYGMCETLWE--PNLEPDDLFETIAQALVNAC 175
+G + +F G P D E P L ++ + + A +A
Sbjct: 161 PVGSYER--EFCRAGGSAASLVMPFLDSQVNKKNQQVENPPPLTLEEALKVVKDAFSSAT 218
Query: 176 ERNAVSGWGAVVYIIEQDKV 195
ER+ G G + I+ ++ V
Sbjct: 219 ERHIHVGDGLEILIVTKEGV 238
>gi|403224082|dbj|BAM42212.1| proteasome subunit [Theileria orientalis strain Shintoku]
Length = 220
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A T KN IA D R ++ K+ ++ +G G+ D +
Sbjct: 16 NGGTVIAATWKNYAVIAADTRLSLRYLIHTRYSTKLLKLTDKCILGTSGMQADMLALQSV 75
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I + +Y +++ + + ++S +LY RRF PY+ ++ GLD E + N D
Sbjct: 76 IERQIEMYRFTHHKEPTFGAIAQLLSTVLYGRRFFPYYTFNILCGLD-ENGNGVTCNYDA 134
Query: 127 IGCVN--------QPSDFVVGGPCSDQLYGMCETLWEPNLEP-DDLFETIAQALVNACER 177
+G N S VV P D L +P + +DL + A+V+A ER
Sbjct: 135 VGNYNYEKYAAQGTSSSLVV--PILDNLLNGNNQQVKPQINSLEDLVNLVKNAMVSAVER 192
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G A + + + V H RM+
Sbjct: 193 DICTGDSAELVVCD----GVVHEPVRME 216
>gi|320163476|gb|EFW40375.1| proteasome subunit beta type-1 [Capsaspora owczarzaki ATCC 30864]
Length = 238
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 12/209 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG++VA+ G+N +A D R N K F + + G D T+ +
Sbjct: 32 NGGTVVAVAGENFAVVASDTRLSEYYGIHTRNCPKTFVLSDKTVLASCGFHGDVLTLTKN 91
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I R YE + + M+ + M+SN LY RRF P++ ++ GLD E+ + + + D
Sbjct: 92 IFTRLRKYEHQHEKTMATHAIAQMLSNTLYYRRFFPFYTYNVIGGLD-ESGKGAVYSYDP 150
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCET-LWEPNLEPD----DLFETIAQALVN-----ACE 176
+G + S + G S L + + L NL P+ L A A+V A E
Sbjct: 151 VGSYERES-YRAAGTASALLQPLLDNQLGYKNLAPNVPRPPLTVARAVAIVKDVFAAATE 209
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G + +I + V + R D
Sbjct: 210 RDIYTGDSVDIQVITSEGVATERYELRKD 238
>gi|255640620|gb|ACU20595.1| unknown [Glycine max]
Length = 207
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VA+ G + IA D R L ++ KI Q+ + G D + + +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKCVMASSGFQADVKALQKV 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEP---------NLEPDDLFETIAQALV 172
G+ + +G +Q S + P D L P E DL +T+
Sbjct: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTV---FA 190
Query: 173 NACERNAVSG 182
+A ER+ +G
Sbjct: 191 SATERDIYTG 200
>gi|388581296|gb|EIM21605.1| 20S proteasome subunit [Wallemia sebi CBS 633.66]
Length = 255
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTV 63
T NGG+++A+ GK+ +A D R +G ++ ++ K++++ + G A D + +
Sbjct: 7 TQNGGTVLAIAGKDFCVVAGDTRQS-EGFSIQSRYETKVWRLNEKATIAANGFAADCKQL 65
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+++++R Y+ N++M K + M+ MLY +RF P++ ++ G+D E + G
Sbjct: 66 VKRVKWRLETYKYAHNKEMPLKSIARMVQTMLYGKRFFPFYSYVIIGGIDDEGTGAVYG- 124
Query: 124 MDLIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEP-------NLEPDDLFETIAQ 169
D +G + + G S +Q+Y + +P NL + + +
Sbjct: 125 FDPVGSYERETCRAAGAAQSLLQPFLDNQIYFRNQEPADPANPPIPGNLPLETVLAIVTD 184
Query: 170 ALVNACERNAVSGWGAVVYIIEQDKVTVRHVKT 202
+ A ER+ G +Y++ + + +++
Sbjct: 185 SFTGATERHIEVGDALEMYVVANSQCDLAPIQS 217
>gi|390365759|ref|XP_001177076.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 201
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 12 VAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQ 71
+AM G + IA D R + + K +Q+ +G G D T+ + + R
Sbjct: 1 MAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYQLTDGTVLGCAGFHGDVLTLTKVLTARL 60
Query: 72 NLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVN 131
+ E + ++KM + AM+S +LY RRF PY+ ++ GLD E + + + D +G
Sbjct: 61 KMXEHEHHKKMFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEE-GKGCVYSFDPVGSYE 119
Query: 132 QPSDFVVGGPCS-------DQLYGMCETLW--EPNLEPDDLFETIAQALVNACERNAVSG 182
+ + G + +Q+ G + W EP + D + ++A ER+ +G
Sbjct: 120 RETYRAAGSSSALLQPLLDNQIGGKNQEGWVKEP-IPVDKAVALVKDVFISAAERDIYTG 178
Query: 183 WGAVVYIIEQDKVTVRHVKTRMD 205
G V++++ +D R D
Sbjct: 179 DGIVLHVLTKDGCKEERFPLRRD 201
>gi|359415410|ref|ZP_09207873.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
gi|358034267|gb|EHK02709.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
Length = 215
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 17 KNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
++ V +A D+R + + QKI+++ ++ + + G D Q + + +R + L++L
Sbjct: 27 EDGVVLAADRRASMGHLTASKYAQKIYRLDENLGLTIAGSVGDAQRIVRMMRSQLKLHKL 86
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDF 136
E +++S + ++SN+L+ + PY + ++ GL E + ++D G + + + F
Sbjct: 87 -ETKELSVRGAGTLLSNILHSSKMMPYMNQFILGGL--EDGNGKLFDLDPAGGLMEHNYF 143
Query: 137 VVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVT 196
G S YG+ E +E ++ + E +A+ +A ER+ SG G +V I +D
Sbjct: 144 TATGSGSQMAYGVLEDHYEEDMGHSEGLELAKKAIKSAMERDTASGNGIMVVEITEDGYN 203
Query: 197 V 197
V
Sbjct: 204 V 204
>gi|84996531|ref|XP_952987.1| proteasome subunit [Theileria annulata strain Ankara]
gi|65303983|emb|CAI76362.1| proteasome subunit, putative [Theileria annulata]
Length = 199
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A T N IA D R + K+F++ +G G+ D +
Sbjct: 14 NGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQSV 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + LY NR+ + + ++S +LY RRF PY+ ++ G+D E + ++ D
Sbjct: 74 LERQIELYRFTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGID-EQGKGVVCGYDA 132
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPN---LEP-----DDLFETIAQALVNACERN 178
+G N + G S + + + L N ++P +DL + A+V+A ER+
Sbjct: 133 VGNYNYEK-YTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLVKNAMVSAVERD 191
Query: 179 AVSG 182
+G
Sbjct: 192 ICTG 195
>gi|448365027|ref|ZP_21553597.1| proteasome endopeptidase complex subunit beta [Natrialba aegyptia
DSM 13077]
gi|445656698|gb|ELZ09531.1| proteasome endopeptidase complex subunit beta [Natrialba aegyptia
DSM 13077]
Length = 243
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 17 KNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYE 75
++ V IA D R + G +++ N QK+ Q+ + + G Q+ +R NLYE
Sbjct: 57 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTMVGSVGGAQSFISSLRAEVNLYE 116
Query: 76 LKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPS 134
+ MS L + N R GP+F + P++ G+D E + + ++D G V +
Sbjct: 117 ARRGEPMSIDALATLAGNFA---RGGPFFAIHPILGGVDSEGSH--VYSIDPAGGVME-D 170
Query: 135 DFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
D+ V G YG+ E +E L DD A+A+ +A ER+ SG G + I +
Sbjct: 171 DYTVTGSGMQLAYGLLEQEYEDGLSNDDATTIAARAIKSAAERDTGSGNGVFLCEITDEG 230
Query: 195 VTV 197
V +
Sbjct: 231 VEI 233
>gi|300711728|ref|YP_003737542.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|448296163|ref|ZP_21486224.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|299125411|gb|ADJ15750.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
gi|445582886|gb|ELY37226.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
Length = 247
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 5/194 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + ++ V +A D R + + QK+ V + + G + Q++ + +
Sbjct: 47 GTTTVGLRAEDGVVLATDMRASLGNMVSSKTVQKVEDVHPTGALTIAGSVSAAQSLIRTL 106
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
R NLY+ ++ MS L + SN+L R G + V P++ G+D E P I +MD +
Sbjct: 107 RAEVNLYDARQGEDMSMTALSTLTSNLL--RSGGFFIVVPVLGGVDDEG--PHIYSMDAL 162
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + + V G S G+ E +E L ++ + +++ +A ER+ SG G +
Sbjct: 163 GGTTEET-YAVSGSGSQFALGVLEQHYEEGLSVEEARDVAIRSVGSAVERDTASGNGINI 221
Query: 188 YIIEQDKVTVRHVK 201
+ ++ V + +
Sbjct: 222 ATVTEEGVDIERFE 235
>gi|444321340|ref|XP_004181326.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
gi|387514370|emb|CCH61807.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
Length = 241
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+I+ + G++ +A D R I ++ F+ K+F G ++ + G A D + + Q
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRFEPKVFDCGDNIVISANGFAADGEALVQ 85
Query: 66 KIRFRQNLYELKEN-RKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ + Y N +K++ K I ++LY +RF PY+V ++ GLD E + + +
Sbjct: 86 RFKNSIKWYHFDHNDKKLTMKSAARNIQHLLYGKRFFPYYVHTIIAGLDEE-GKGAVYSF 144
Query: 125 DLIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPN---------LEPDDLFETIA 168
D +G + G S +Q+ + + E N L D+ + +
Sbjct: 145 DPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPESNGKVKRPLKYLTIDECIKLVR 204
Query: 169 QALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A +A ER+ G G + I+ +D V + + D
Sbjct: 205 DAFTSATERHIQVGDGLEILIVTKDGVRKEYFDLKRD 241
>gi|448339242|ref|ZP_21528272.1| proteasome endopeptidase complex, beta subunit [Natrinema pallidum
DSM 3751]
gi|445620748|gb|ELY74237.1| proteasome endopeptidase complex, beta subunit [Natrinema pallidum
DSM 3751]
Length = 243
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 58 DGVIIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRAEVNLYEA 117
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ +MS L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 118 RRGERMSIDALATLAGNFA---RGGPFFAIHPILGGVDDEGSH--VYSIDPAGGVME-DD 171
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG E +EP++ ++ A+ + +A ER+ SG G + I + V
Sbjct: 172 YTVTGSGMQLAYGHLEQAYEPDMSNEEAKTVAARGIKSAVERDTGSGNGVFLAEITDEGV 231
Query: 196 TVR 198
+
Sbjct: 232 DIH 234
>gi|397610458|gb|EJK60845.1| hypothetical protein THAOC_18741 [Thalassiosira oceanica]
Length = 283
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+ +A++G + +A D R L+ N K+ + +G G TD +
Sbjct: 78 FNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTGRCVLGSAGCKTDVDQLRS 137
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ + +Y + M+ + M+ N LY +RF PY+ ++ G+D E + + + D
Sbjct: 138 VLDIKMKVYAHNHRKPMATPSVAQMLGNTLYYKRFFPYYSFNVLAGIDSE-GKGAVYSYD 196
Query: 126 LIGCVNQPSDFVVGG-------PCSDQLYGMCETLWE-PNLEPDDLFETIAQALVNACER 177
IG + + F G P D + L E +L +++ E + A + A ER
Sbjct: 197 AIGSFER-TPFSASGSGQSFLIPLMDNVISHKNRLDERRDLPAEEVVEIVKDAFLTAGER 255
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G + +I +D + + + + D
Sbjct: 256 DIYTGDAVDIMVITKDGIDKQTFQLKAD 283
>gi|402222920|gb|EJU02985.1| N-terminal nucleophile aminohydrolase [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+I+A+ GK+ IA D R +G ++ + K+F++ + + G D T +
Sbjct: 25 NGGTILAIAGKDFSVIAGDTR-QTEGYSIQTRYAPKVFKLTDRAVLAVNGFQADCSTFVK 83
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
K++ R Y +++M K + MI MLY +RF PY+ ++ G++ E + + D
Sbjct: 84 KVKQRIEWYRHAHSKQMPLKAIARMIQGMLYGKRFFPYYTYNILGGIE-EDGTGAVYSFD 142
Query: 126 LIGCVNQPSDFVVGGPCS-------DQLYGMCET------LWEP-NLEPDDLFETIAQAL 171
+G + + G S +Q+Y +T +EP NL D + + +
Sbjct: 143 PVGSYEREACRAAGAASSLIQPFLDNQIYFKNQTPAPGAAPFEPGNLPMDTVLSIVIDSF 202
Query: 172 VNACERNAVSGWGAVVYII 190
+A ER+ G G ++++
Sbjct: 203 TSATERHIEVGDGLEMFVV 221
>gi|391338616|ref|XP_003743654.1| PREDICTED: proteasome subunit beta type-1-like [Metaseiulus
occidentalis]
Length = 233
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
N G++V + G++ I D R + + + + K+F++ +G G D ++ +
Sbjct: 28 NAGTLVGIAGEDFAVIGSDLRLSLGFSIFSRDQSKLFKLTDRAVLGSSGCWADCVSLNKF 87
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ R Y + N+ MS K + S MLY RRF PYF ++ G+D E + I + D
Sbjct: 88 LEIRLKTYGFEHNQPMSTKAIAQCCSTMLYSRRFFPYFAWNILAGID-EDGKGAIYSYDP 146
Query: 127 IGCVNQPSDFVVGG------PCSDQLYGMCETLWEPNLEP---DDLFETIAQALVNACER 177
+G + G P D + G + P+ P + I ++A ER
Sbjct: 147 VGNFERVPYQAAGNSGPQVLPFLDSIVGK-KNQSNPDKAPITKERAINLIKDIFISAAER 205
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ G G + +I +D + + R D
Sbjct: 206 DITVGDGTHIIVITKDGLEEIRLDLRKD 233
>gi|18977776|ref|NP_579133.1| proteasome subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|25453238|sp|Q8U125.1|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 206
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + K V +A D R + A N KI ++ H+ + G D + + +
Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ NLY+ ++MS K L +++N+L ++ PY +V G D +P + ++D++
Sbjct: 70 KAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDE---KPRLFSVDMV 126
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + ++ G + Y + ++ + + +D + +A+ A +R+ +G G +V
Sbjct: 127 GGITED-NYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLV 185
Query: 188 YIIEQD 193
I +D
Sbjct: 186 VTITKD 191
>gi|346467893|gb|AEO33791.1| hypothetical protein [Amblyomma maculatum]
Length = 221
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L ++ KI Q+ + G D + + +
Sbjct: 12 NGGTCVAIAGLDYCVVAADTRMSVGYSILTRDYSKICQLADKSILASSGFQGDIKALQKN 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ + +Y+ + N++MS + ++SN LY +R PY+ ++ GLD E + +
Sbjct: 72 LAAKHLIYQHQHNKQMSCPAMGQLLSNTLYYKRXXPYYAFNVLAGLDNEGKGCVFTYDAV 131
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + +G Q S + P D L P L + + + +A
Sbjct: 132 GSYERVGYSAQGSGSTLIMPVLDNQLKSPSPLLLPAKDAVTPLSESEAVDMVKDVFASAT 191
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I+ + ++ R D
Sbjct: 192 ERDIYTGDRLEIVVIDASGIRREFIELRKD 221
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 91/187 (48%), Gaps = 3/187 (1%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+ G + V + K+ + A +KR + KIF++ H+ + G D Q + +
Sbjct: 7 FKGTTTVGIVCKDGIVFASEKRATLGNLIAHKAVDKIFKIDEHLATTVAGSVGDAQKLVE 66
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
++ LY+L+ + + + ++ SN+L+ R P+ V+ ++ G+D ET P I ++D
Sbjct: 67 YLKAEVRLYKLRTGKPATVRAAASIASNILHASRMFPFIVQMLIGGID-ETG-PKIYSVD 124
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
G + +V G S YG+ E ++ ++ +D +A+ ++ +R+ SG G
Sbjct: 125 PAGGKIEDK-YVSTGSGSPIAYGVLEDRYKKDMSVEDAINIALRAIKSSTKRDTFSGDGI 183
Query: 186 VVYIIEQ 192
+ ++ +
Sbjct: 184 SLAVVTE 190
>gi|226531171|ref|NP_001152701.1| proteasome subunit beta type 1 [Zea mays]
gi|194701432|gb|ACF84800.1| unknown [Zea mays]
gi|195605546|gb|ACG24603.1| proteasome subunit beta type 1 [Zea mays]
gi|195659171|gb|ACG49053.1| proteasome subunit beta type 1 [Zea mays]
gi|223974469|gb|ACN31422.1| unknown [Zea mays]
gi|414589908|tpg|DAA40479.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L + KI + + G D + + +
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALQKN 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R+ LY+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 131
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEP------NLEPDDLFETIAQALVNAC 175
G+ + G Q + + P D L P L + + + +A
Sbjct: 132 GSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPVRDAVTPLSESEAIDLVKDVFASAT 191
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I + ++ R D
Sbjct: 192 ERDIYTGDKLEIVVINKAGTMREYIDLRKD 221
>gi|449704101|gb|EMD44406.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 225
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
N G+ V + G++ V IA D R L N KI+ + S G+ D + + +
Sbjct: 26 NCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELTDQ 85
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I+ Y+ + ++MS + + ++SN LY RF PY+ ++ G++ + + + N D
Sbjct: 86 IKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSK-GKAVTYNYDA 144
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQA---LVNACERNAVSGW 183
+G + + G + Y + ++L + EP E I A + +ACER+ +G
Sbjct: 145 VGSF-EERKYSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACERDIHTGD 203
Query: 184 GAVVYIIEQDKV 195
+ I+ + +
Sbjct: 204 NVEIVILNSNGI 215
>gi|448414651|ref|ZP_21577664.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
gi|445681760|gb|ELZ34188.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
Length = 243
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 5/197 (2%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V + ++ V +A D R + + + QK+ ++ + + G + Q++
Sbjct: 46 TKTGTTTVGLKTEDGVVLATDMRASLGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLI 105
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ IR LYE + MS L ++ N L F Y V+P++ G+D + P I ++
Sbjct: 106 RSIRAEVRLYESRRGENMSMTALSTLLGNFLRSGAF--YVVQPILGGVDEDG--PHIYSI 161
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + + ++ V G S G+ E + L D+ A+A+ +A ER+ SG G
Sbjct: 162 DPAGSILE-EEYTVTGSGSQYALGVLEQEYNDALSIDEAKTVAARAVKSAVERDLASGNG 220
Query: 185 AVVYIIEQDKVTVRHVK 201
+ ++ +D V + K
Sbjct: 221 INICVVTEDGVEITQHK 237
>gi|195611928|gb|ACG27794.1| proteasome subunit beta type 1 [Zea mays]
Length = 221
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L + KI + + G D + + +
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALQKN 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R+ LY+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 72 LAARELLYQXQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 131
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEP------NLEPDDLFETIAQALVNAC 175
G+ + G Q + + P D L P L + + + +A
Sbjct: 132 GSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPVRDAVTPLSESEAIDLVKGVFASAT 191
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I + ++ R D
Sbjct: 192 ERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
>gi|254168241|ref|ZP_04875087.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|254168404|ref|ZP_04875249.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|289595801|ref|YP_003482497.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
boonei T469]
gi|302595865|sp|B5IEE5.1|PSB_ACIB4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|197622685|gb|EDY35255.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|197622750|gb|EDY35319.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|289533588|gb|ADD07935.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
boonei T469]
Length = 210
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 7/192 (3%)
Query: 17 KNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
K+ V + + R ++ QK++++ ++ + GL D Q + + +R NLY +
Sbjct: 16 KDGVVMGTEHRASMETFIAHKTAQKLYKLDYNIGMTTAGLVGDLQVLVRYMRAEINLYRI 75
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDF 136
+ M ++SN+L ER+F PY+V +V G D + + +D G + +
Sbjct: 76 RRKMYMPVGAAATLLSNILNERKFFPYYVGLLVGGFDSKGYH--VFAIDAAGGAIEDK-Y 132
Query: 137 VVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD--- 193
G S +YG+ E W+ +L D+ + + + A R+A SG G V I +D
Sbjct: 133 ASVGSGSLFVYGVLEDRWKDDLSLDEGINLVIRGINAAMRRDAASGDGISVATITKDEGF 192
Query: 194 -KVTVRHVKTRM 204
+++ V+ RM
Sbjct: 193 VELSQEEVEKRM 204
>gi|448358684|ref|ZP_21547361.1| 20S proteasome subunits A and B [Natrialba chahannaoensis JCM
10990]
gi|445645266|gb|ELY98272.1| 20S proteasome subunits A and B [Natrialba chahannaoensis JCM
10990]
Length = 241
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 9/190 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
G + V + G + V +A D+R + G + + QK+ VG H + G + Q+ +
Sbjct: 12 TGTTTVGLAGADGVVLAADRRASLGGRFVTNRTAQKVVPVGDHTALTFAGSVGEAQSFVR 71
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPY-FVEPMVVGLDPETAEPIIGNM 124
++R ++ YE +R S + + ++L R GPY +E ++ G PE A +G
Sbjct: 72 QLRAERSRYEHATDRSPSVETTATVAGDLL---RSGPYQHLELVLGGTFPEPAVYQVGPG 128
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
G ++ P + G YG E +EP+ D L A+ NA ER+ SG G
Sbjct: 129 G--GVMDTP--YAASGSGMQLAYGRLEDAYEPDHSVDTLRGLATTAIRNATERDTASGDG 184
Query: 185 AVVYIIEQDK 194
V + D+
Sbjct: 185 MTVATLTVDE 194
>gi|397651896|ref|YP_006492477.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|393189487|gb|AFN04185.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 203
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + K V +A D R + A N KI ++ H+ + G D + + +
Sbjct: 7 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 66
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ NLY+ ++MS K L +++N+L ++ PY +V G D +P + ++D++
Sbjct: 67 KAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDE---KPRLFSVDMV 123
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + ++ G + Y + ++ + + +D + +A+ A +R+ +G G +V
Sbjct: 124 GGITED-NYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLV 182
Query: 188 YIIEQD 193
I +D
Sbjct: 183 VTITKD 188
>gi|307595676|ref|YP_003901993.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307550877|gb|ADN50942.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 205
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Query: 9 GSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIR 68
G+ V + + V +A +KR T + + +K+F+V ++ + G+ D Q + + +
Sbjct: 10 GTAVGIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGIASIGILADMQVLTKIAK 69
Query: 69 FRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIG 128
+LY L + S + ++S +L+ R PYFVE +V G+D E I MD +G
Sbjct: 70 AYMSLYALDTKTRPSIRSAAKLLSYVLFANRVLPYFVEVLVGGVDDEGPHLFI--MDSLG 127
Query: 129 CVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
+ + D+ G + + E+ ++P++ + E +A+ + R+ VSG G
Sbjct: 128 SLIE-DDYAAVGTGTKLAIAILESNYKPSMTVKEARELAIKAINQSISRDPVSGDG 182
>gi|302309124|ref|NP_986343.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|299788212|gb|AAS54167.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|374109588|gb|AEY98493.1| FAGL324Wp [Ashbya gossypii FDAG1]
Length = 243
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 19/206 (9%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+I+ + G++ +A D R + + K+F G ++ + G A D + ++
Sbjct: 30 NGGTILGIAGEDFAVLAGDTRHTTGYSINSREEPKVFDCGDNILISANGFAADGDALVKR 89
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ Y N+KM+ K I ++LY +R PY+V ++ GLD E + + + D
Sbjct: 90 FKNSMKWYRFDHNKKMTIKSAARSIQHLLYGKRMFPYYVHTIIAGLDEE-GKGAVYSYDP 148
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCE------TLWEPN-----------LEPDDLFETIAQ 169
+G + GG + + + +EP+ L D++ +
Sbjct: 149 VGSYEREQ-CRAGGAAASLIMPFLDNQVNFKNQYEPDSNGTKKRALRFLSVDEVVRLVRD 207
Query: 170 ALVNACERNAVSGWGAVVYIIEQDKV 195
A +A ER+ G G + I+ +D V
Sbjct: 208 AFTSATERHIHVGDGLQIMIVTKDGV 233
>gi|315428112|dbj|BAJ49699.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 168
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Query: 4 MTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTV 63
+ Y G + + + GK+ V IA +KRF ++ +K+F++ + + G+ D Q +
Sbjct: 13 LYYPGATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNM 72
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+++ NLY L++ + S K + ++S L+ R+ PYF+E +V G+D + I+
Sbjct: 73 IKEVTAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGIDSQGPHVIV-- 130
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCE 151
+D +G + + D+ V G ++ G+ E
Sbjct: 131 LDPLGSMIE-DDYAVVGTGAEVAVGVIE 157
>gi|226533094|ref|NP_001147213.1| proteasome subunit beta type 1 [Zea mays]
gi|195608582|gb|ACG26121.1| proteasome subunit beta type 1 [Zea mays]
Length = 219
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ +A+ G + +A D R I + L+ + KI Q+ + G D + + +
Sbjct: 10 NGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLASSGFQGDIKALQKA 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
+ ++ +YE N+KMS + ++SN LY +RF PY+ ++ GLD +
Sbjct: 70 LAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQ 118
>gi|67475302|ref|XP_653346.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56470287|gb|EAL47959.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
Length = 226
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
N G+ V + G++ V IA D R L N KI+ + S G+ D + + +
Sbjct: 27 NCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELTDQ 86
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I+ Y+ + ++MS + + ++SN LY RF PY+ ++ G++ + + + N D
Sbjct: 87 IKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSK-GKAVTYNYDA 145
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQA---LVNACERNAVSGW 183
+G + + G + Y + ++L + EP E I A + +ACER+ +G
Sbjct: 146 VGSFEERK-YSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACERDIHTGD 204
Query: 184 GAVVYIIEQDKV 195
+ I+ + +
Sbjct: 205 NVEIVILNSNGI 216
>gi|348674011|gb|EGZ13830.1| hypothetical protein PHYSODRAFT_286698 [Phytophthora sojae]
Length = 247
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 10/185 (5%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+++A+ G++ V +A D R + L+ K+ Q+ +G PG D +
Sbjct: 42 FNGGTVLAIAGEDFVVVAGDTRLSTGYSVLSREESKLHQLTPTSVLGCPGSHNDIIQLRG 101
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ R +Y+ MS + ++ N LY RRF PY+ ++ G+D E + + D
Sbjct: 102 VLSIRAQMYQHDNETAMSSSAMAQLLMNTLYSRRFFPYYAFCILCGID-ENGKGAVYTYD 160
Query: 126 LIGCVNQPSDFVVGG------PCSDQLYGMCETLWEPN--LEPDDLFETIAQALVNACER 177
IG ++ + G P D L +T +P L + + I A + A ER
Sbjct: 161 AIGSYDRVTRAAQGSGGHLMIPLLDNLVEH-DTRTDPKKTLSLQETKDIIKDAFITAGER 219
Query: 178 NAVSG 182
+ +G
Sbjct: 220 DIYTG 224
>gi|195398909|ref|XP_002058063.1| GJ15696 [Drosophila virilis]
gi|194150487|gb|EDW66171.1| GJ15696 [Drosophila virilis]
Length = 256
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A+ G+ V IA D R + + K+F + V GL DT ++
Sbjct: 48 NGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISMTSL 107
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +YE + N+ +S L MIS ++Y RRF PY ++ G+D + + + D
Sbjct: 108 LQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGID-QAGKGAVYYYDP 166
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETL-WEPN-LEPDDLFETI----AQALVNAC----- 175
+G + + V+G L + L WE + L P D + + A AL C
Sbjct: 167 VGHMERCRYRVLGSSGKMLLPALDHGLGWEHHTLVPPDQYPPLDKERALALARNCLRVAS 226
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+R+ +G V+ +I +D + + R D
Sbjct: 227 DRDLFTGDTGVLKLITKDGIETETLPLRKD 256
>gi|433638518|ref|YP_007284278.1| proteasome endopeptidase complex, archaeal, beta subunit [Halovivax
ruber XH-70]
gi|433290322|gb|AGB16145.1| proteasome endopeptidase complex, archaeal, beta subunit [Halovivax
ruber XH-70]
Length = 242
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 57 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISNLRAEVNLYEA 116
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ + MS L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 117 RNSEDMSIDALATLAGNFA---RGGPFFAIHPILGGVDDEGSH--VYSIDPAGGVME-DD 170
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG E +E L D+ A+ + +A ER+ SG G + I D V
Sbjct: 171 YTVTGSGMQLAYGHLEQSYEDGLSNDEAMTIAARGIKSAVERDTGSGNGIFLCEITDDGV 230
Query: 196 TVR 198
+
Sbjct: 231 DIH 233
>gi|386875364|ref|ZP_10117538.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386806763|gb|EIJ66208.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 210
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
+G + V + K+ V + D R +N KI ++ H + L G D Q +
Sbjct: 11 HGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDLHAGLTLAGGVADAQNIVDI 70
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R+ NL+ +++ +S L + S + ++ R P+ + +V G D P + N+D+
Sbjct: 71 LRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGFDANG--PALFNIDM 128
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G V + S +V G S YG+ E ++ +L ++ + +A+ A RN +G G
Sbjct: 129 FGSVEEKS-YVTTGSGSPVAYGLLEEEYKKDLTVEEAKKIALRAVKAAIVRNIGTGDGIN 187
Query: 187 VYIIEQD 193
+ ++++D
Sbjct: 188 IAVMDKD 194
>gi|195398923|ref|XP_002058070.1| GJ15881 [Drosophila virilis]
gi|194150494|gb|EDW66178.1| GJ15881 [Drosophila virilis]
Length = 262
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A+ G+ V IA D R + + K+F + V GL DT ++
Sbjct: 54 NGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISMTSL 113
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R +YE + N+ +S L MIS ++Y RRF PY ++ G+D + + + D
Sbjct: 114 LQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGID-QAGKGAVYYYDP 172
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETL-WEPN-LEPDDLFETI----AQALVNAC----- 175
+G + + V+G L + L WE + L P D + + A AL C
Sbjct: 173 VGHMERCRYRVLGSSGKMLLPALDHGLGWEHHTLVPPDQYPPLDKERALALARNCLRVAS 232
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+R+ +G V+ +I +D + + R D
Sbjct: 233 DRDLFTGDTGVLKLITKDGIETETLPLRKD 262
>gi|111226971|ref|XP_001134620.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
gi|74926737|sp|Q86A21.1|PSB1_DICDI RecName: Full=Proteasome subunit beta type-1
gi|90971293|gb|EAS66954.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
Length = 236
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTAL-ADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+++A+ GK+ IA D R G + + KIFQ+ + G+ DT + +
Sbjct: 29 NGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQADTIALQK 88
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+++ +E + + MS + +SN LY +RF PY+ +V G+D E E I D
Sbjct: 89 RLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVD-EQGEGWIWTYD 147
Query: 126 LIGC------VNQPSDFVVGGPCSD-QLYGMCETLWEPN--LEPDDLFETIAQALVNACE 176
+G +Q S + P D Q+ + + E N + + + + ++ +A E
Sbjct: 148 AVGSHERVKYSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDVSCEQVVSFVKDSITSAGE 207
Query: 177 RNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
R+ +G A + +++++ V + ++D
Sbjct: 208 RDIYTGDFADIVVVDKNGVHWEKFELKLD 236
>gi|403216524|emb|CCK71021.1| hypothetical protein KNAG_0F03590 [Kazachstania naganishii CBS
8797]
Length = 248
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 16/214 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+I+ + G++ +A D R + + + K+F VG + + G A D+ + ++
Sbjct: 36 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRSESKVFDVGDGIVISANGFAADSTALVKR 95
Query: 67 IRFRQNLYELKEN-RKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
R Y EN +++S I ++LY +RF PY+V ++ GLD E + + + D
Sbjct: 96 FRNSLKWYHFNENEKRLSLSAAARNIQHLLYGKRFFPYYVHTIIAGLDEE-GKGAVYSFD 154
Query: 126 LIGCVNQPSDFVVGGPCS--------------DQLYGMCETLWEPNLEPDDLFETIAQAL 171
+G + G S + G E L +++ + + +
Sbjct: 155 PVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPGTGEKRPITYLSVEEVVKLVRDSF 214
Query: 172 VNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ G G + I+ +D V + + + D
Sbjct: 215 TSATERHIHVGDGLEILIVTKDGVRREYHELKRD 248
>gi|315425374|dbj|BAJ47040.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 223
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Query: 17 KNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
K+ V +A D R +K+ + H+ + + G D QT+ I+ N Y++
Sbjct: 25 KDAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQI 84
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDF 136
+ MS + + S++++ R+ P++ + ++ G+D E P + N+D G V +
Sbjct: 85 MRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEG--PHLYNLDPFGSVTE-EKL 141
Query: 137 VVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
+ G S YG+ E + +++ + E QA+ A R+A SG V + +DK
Sbjct: 142 IATGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKDK 199
>gi|91772427|ref|YP_565119.1| proteasome endopeptidase complex [Methanococcoides burtonii DSM
6242]
gi|121689381|sp|Q12YV7.1|PSB_METBU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|91711442|gb|ABE51369.1| Proteasome subunit beta precursor [Methanococcoides burtonii DSM
6242]
Length = 210
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V +A ++R + + +KI+Q+ + + G D Q + +
Sbjct: 8 KGTTTVGIVCTDGVVLATEQRATMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIVRI 67
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I L++++ ++ K + ++SNML +R+ P V+ ++ G+D P I ++D
Sbjct: 68 ISVESKLFKMRRQESITIKGITTLLSNMLSGQRYYPLMVQLLIGGVDKNG--PAIYSLDA 125
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G + + V G S YG+ E + ++ + + +AL NA +R++ SG
Sbjct: 126 LGGNIEETRAVSTGSGSPMAYGVLEDRYTEDMTVVEGVDLAIRALHNAMKRDSASGENID 185
Query: 187 VYIIEQDK 194
V +I +DK
Sbjct: 186 VVVITKDK 193
>gi|448382258|ref|ZP_21562014.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
thermotolerans DSM 11522]
gi|445662091|gb|ELZ14865.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
thermotolerans DSM 11522]
Length = 243
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRAEVNLYEA 117
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ MS + L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 118 RRGENMSIEALATLAGNFA---RGGPFFAIHPILGGVDDEGSH--VYSIDPAGGVME-DD 171
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG E +EP++ ++ A+ + +A ER+ SG G + I + V
Sbjct: 172 YTVTGSGMQLAYGHLEQAYEPDMSTEEAKTVAARGIKSAVERDTGSGNGVFLCEITDEGV 231
Query: 196 TVR 198
+
Sbjct: 232 DIH 234
>gi|254586379|ref|XP_002498757.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
gi|238941651|emb|CAR29824.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
Length = 244
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T NGG+++ + G++ +A D R + + K+F G ++ + G A D + +
Sbjct: 28 TDNGGTVLGIAGEDFAVLAGDTRHTTDYSINSRYESKVFDCGDNIVITANGYAADGEALV 87
Query: 65 QKIRFRQNLYELKEN-RKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
++ + Y N +K+S I ++LY +RF PY+V+ ++ GLD E + + +
Sbjct: 88 KRFKNSVKWYHFDHNDKKLSLNSAARNIQHLLYGKRFFPYYVQTIIAGLD-EEGKGAVYS 146
Query: 124 MDLIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPN---------LEPDDLFETI 167
D +G + G S +Q+ + + E N L D++ +
Sbjct: 147 FDPVGSYEREQCRAGGAAASLIMPFLDNQVNFHNQYVPESNGRVKRPLKFLSVDEVIRLV 206
Query: 168 AQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A +A ER+ G G + I+ +D VT + + + D
Sbjct: 207 RDAFTSATERHIQVGDGLEILIVTKDGVTKQFYELKRD 244
>gi|315426554|dbj|BAJ48184.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485300|dbj|BAJ50954.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Query: 17 KNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
K+ V +A D R +K+ + H+ + + G D QT+ I+ N Y++
Sbjct: 22 KDAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQI 81
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDF 136
+ MS + + S++++ R+ P++ + ++ G+D E P + N+D G V +
Sbjct: 82 MRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEG--PHLYNLDPFGSVTE-EKL 138
Query: 137 VVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
+ G S YG+ E + +++ + E QA+ A R+A SG V + +DK
Sbjct: 139 IATGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKDK 196
>gi|351734454|ref|NP_001238324.1| uncharacterized protein LOC100306148 [Glycine max]
gi|255627685|gb|ACU14187.1| unknown [Glycine max]
Length = 223
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VA+ G + IA D R L ++ KI ++ + G D + + +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISRLAEKCVMASSGFQADVKALQKV 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEP---------NLEPDDLFETIAQALV 172
G+ + +G +Q S + P D L P E DL +T+
Sbjct: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTV---FA 190
Query: 173 NACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ +G + ++ + ++ + D
Sbjct: 191 SATERDIYTGDKVEIVVLNASGIRREYMDLKKD 223
>gi|405121415|gb|AFR96184.1| proteasome subunit [Cryptococcus neoformans var. grubii H99]
Length = 272
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGGSI+A+ GK+ IA D R +G ++ + +K++Q+ + + G A D +
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQS-EGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVK 88
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+++ R YE N+ M K + MI MLY +RF PY+V ++ G++ E + + D
Sbjct: 89 RVKQRLEWYEHAHNKSMGLKSIARMIQTMLYGKRFFPYYVYNILGGIE-EDGSGAVYSFD 147
Query: 126 LIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEP--------NLEPDDLFETIAQA 170
+G + + G S +Q+Y + EP NL + + +
Sbjct: 148 PVGSYEREACRAAGAAQSLIQPFLDNQVYFRNQQP-EPGAAPFVPGNLPLSTVLSLVVDS 206
Query: 171 LVNACERNAVSGWGAVVYII 190
+A ER+ G G +Y++
Sbjct: 207 FTSATERHIEVGDGMEIYVV 226
>gi|448373810|ref|ZP_21557780.1| proteasome endopeptidase complex, beta subunit [Halovivax asiaticus
JCM 14624]
gi|445661181|gb|ELZ13973.1| proteasome endopeptidase complex, beta subunit [Halovivax asiaticus
JCM 14624]
Length = 242
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 57 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISNLRAEVNLYEA 116
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ MS L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 117 RNGEDMSIDALATLAGNFA---RGGPFFAIHPILGGVDDEGSH--VYSIDPAGGVME-DD 170
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG E +E L D+ A+ + +A ER+ SG G + I D V
Sbjct: 171 YTVTGSGMQLAYGHLEQSYEDGLSNDEAMTIAARGIKSAVERDTGSGNGIFLCEITDDGV 230
Query: 196 TVR 198
+
Sbjct: 231 DIH 233
>gi|448540830|ref|ZP_21623751.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|448549222|ref|ZP_21627911.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|448555580|ref|ZP_21631620.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
gi|445708983|gb|ELZ60818.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|445713285|gb|ELZ65063.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|445718325|gb|ELZ70028.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
Length = 243
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 6/196 (3%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V + + V +A D R + + + QK+ ++ + + G + Q++
Sbjct: 46 TKTGTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLI 105
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+R LYE + MS + L ++ N L R G Y V+P++ G+D ET P I ++
Sbjct: 106 SSLRAEVRLYEARRGEDMSMQALSTLVGNFL--RSGGFYVVQPILGGVD-ETG-PHIYSI 161
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + + ++ V G S G+ E +E L ++ +A+ +A ER+ SG G
Sbjct: 162 DPAGSILEE-EYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNG 220
Query: 185 AVVYIIEQDKVTV-RH 199
+ ++ +D V + RH
Sbjct: 221 INIAVVTEDGVDIQRH 236
>gi|448351963|ref|ZP_21540757.1| proteasome endopeptidase complex subunit beta [Natrialba
taiwanensis DSM 12281]
gi|445632523|gb|ELY85735.1| proteasome endopeptidase complex subunit beta [Natrialba
taiwanensis DSM 12281]
Length = 243
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 17 KNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYE 75
++ V IA D R + G +++ N QK+ Q+ + + G Q+ +R NLYE
Sbjct: 57 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTMVGSVGGAQSFISSLRAEVNLYE 116
Query: 76 LKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPS 134
+ MS L + N R GP+F + P++ G+D E + + ++D G V +
Sbjct: 117 ARRGDPMSIDALATLAGNFA---RGGPFFAIHPILGGVDSEGSH--VYSIDPAGGVME-D 170
Query: 135 DFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
D+ V G YG+ E +E L DD A+A+ +A ER+ SG G + I +
Sbjct: 171 DYTVTGSGMQLAYGLLEQEYEDGLANDDATTIAARAIKSAAERDTGSGNGVFLCEITDEG 230
Query: 195 VTV 197
V +
Sbjct: 231 VEI 233
>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|433422417|ref|ZP_20405977.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|448289696|ref|ZP_21480860.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|448570967|ref|ZP_21639478.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|448595863|ref|ZP_21653310.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
gi|306755975|sp|D4GYZ1.1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
gi|432198645|gb|ELK54905.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|445581429|gb|ELY35787.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|445722885|gb|ELZ74536.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|445742317|gb|ELZ93812.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
Length = 243
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 6/196 (3%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V + + V +A D R + + + QK+ ++ + + G + Q++
Sbjct: 46 TKTGTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLI 105
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+R LYE + MS + L ++ N L R G Y V+P++ G+D ET P I ++
Sbjct: 106 SSLRAEVRLYEARRGEDMSMQALSTLVGNFL--RSGGFYVVQPILGGVD-ETG-PHIYSI 161
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + + ++ V G S G+ E +E L ++ +A+ +A ER+ SG G
Sbjct: 162 DPAGSILEE-EYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNG 220
Query: 185 AVVYIIEQDKVTV-RH 199
+ ++ +D V + RH
Sbjct: 221 INIAVVTEDGVDIQRH 236
>gi|302348116|ref|YP_003815754.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
gi|302328528|gb|ADL18723.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
Length = 212
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVY 64
++G + V + + V +A DKR GT +A +KI ++ + + + GL D Q +
Sbjct: 17 WHGTTTVGLIAGDYVVLAADKR-ATAGTLIASRTVKKIVKLTDYAAMTISGLVADAQALA 75
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+R YEL +++S + +++N+L ++ PY V+ +V G D P + +
Sbjct: 76 DAVREEARYYELDRGKRLSVYGMATLLANILSSSKYFPYLVQLIVGGYD---TAPHLYAI 132
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G V + G S G+ E ++ + DD A+A+ +A R++ +G G
Sbjct: 133 DPYGGVTEEK-VTSTGSGSPVALGVLERGYKEGISLDDAVNLAAEAIRSAILRDSATGDG 191
Query: 185 AVVYII 190
V II
Sbjct: 192 IDVTII 197
>gi|448562307|ref|ZP_21635346.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
gi|445719511|gb|ELZ71191.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
Length = 243
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V + + V +A D R + + + QK+ ++ + + G + Q++
Sbjct: 46 TKTGTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLI 105
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+R LYE + MS + L ++ N L R G Y V+P++ G+D ET P I ++
Sbjct: 106 SSLRAEVRLYEARRGEDMSMQALSTLVGNFL--RSGGFYVVQPILGGVD-ETG-PHIYSI 161
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + + ++ V G S G+ E ++ L ++ + +A+ +A ER+ SG G
Sbjct: 162 DPAGSILE-EEYTVTGSGSQYALGVLEQEFKDGLSIEEAKQVATKAIRSAVERDLASGNG 220
Query: 185 AVVYIIEQDKVTV-RH 199
+ ++ +D V + RH
Sbjct: 221 INIAVVTEDGVDIQRH 236
>gi|58268196|ref|XP_571254.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113318|ref|XP_774684.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257328|gb|EAL20037.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227489|gb|AAW43947.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 272
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGGSI+A+ GK+ IA D R +G ++ + +K++Q+ + + G A D +
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQS-EGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVK 88
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+++ R YE N+ M K + MI MLY +RF PY+V ++ G++ E + + D
Sbjct: 89 RVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIE-EDGSGAVYSFD 147
Query: 126 LIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEP--------NLEPDDLFETIAQA 170
+G + + G S +Q+Y EP NL + + +
Sbjct: 148 PVGSYEREACRAAGAAQSLIQPFLDNQVY-FKNQQPEPGAAPFVPGNLPLSTVLSLVVDS 206
Query: 171 LVNACERNAVSGWGAVVYII 190
+A ER+ G G +Y++
Sbjct: 207 FTSATERHIEVGDGMEIYVV 226
>gi|440293947|gb|ELP86994.1| proteasome subunit beta type 1, putative, partial [Entamoeba
invadens IP1]
Length = 173
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 35 LADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNM 94
L N KI+Q+ S G+ D + +++ + Y + N++MS + + ++SN
Sbjct: 2 LTRNSTKIYQLSSKCIFTASGMRADMNELTDQLKAQIKNYRYENNKEMSTEAIAQLLSNT 61
Query: 95 LYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLW 154
LY RF PY+ ++ GL + EP+I N D +G Q + G + Y + + L
Sbjct: 62 LYSHRFFPYYSFSILTGLSVK-GEPLIYNYDAVGSF-QEVAYTCSGSGEELAYPLLDALL 119
Query: 155 EPNLEPDDLFE----TIAQ-ALVNACERNAVSGWGAVVYIIEQDKVT 196
+ E L E IA+ + +ACER+ +G +Y++ ++ +T
Sbjct: 120 KQRTEV--LLEKEGVNIARDVMTSACERDIHTGDDVELYVLNKNGIT 164
>gi|347522768|ref|YP_004780338.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459650|gb|AEM38086.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 209
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 4/197 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + + V +A D+R +KI ++ +M + GL D Q + +
Sbjct: 17 TGTTTVGLKLREYVVLAADRRATAGYYIAHKKTRKIVKITDYMAMTTSGLVADAQVLAEI 76
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+R YEL RK S M++ +++ R PY V+ ++ G D P + N+D
Sbjct: 77 LREELRYYELTTKRKPSVAAAANMLAAIIFSARMYPYIVQLLLGGYD---TAPRLFNIDW 133
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
+G V + + G S G+ E+ + +++ D+ E +A+ A ER+ +G G
Sbjct: 134 LGTVTE-EKYTATGSGSPIAIGVIESGYREDMKVDEAVELAVKAVRAAMERDVATGNGID 192
Query: 187 VYIIEQDKVTVRHVKTR 203
V II + R R
Sbjct: 193 VVIIGKGTFITREYPPR 209
>gi|159041872|ref|YP_001541124.1| proteasome endopeptidase complex protein [Caldivirga maquilingensis
IC-167]
gi|302595705|sp|A8M8R5.1|PSB2_CALMQ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|157920707|gb|ABW02134.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
Length = 200
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Query: 9 GSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIR 68
G+ V + K+ V +A +KR ++ + +K++ + + + + G+ D QT+ + IR
Sbjct: 10 GTTVGIKAKDGVVLAAEKRVSYGFYLMSKSGKKVYPITNRIGLASSGILADIQTITKVIR 69
Query: 69 FRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIG 128
E++ R +S + ++S ML++ ++ PY E MV G+D E + I +D G
Sbjct: 70 ANIANMEIEMKRPVSVRAAAKLLSIMLFQNKYMPYIAETMVGGIDEEGPKLFI--LDSWG 127
Query: 129 CVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
+ + DF G + G+ ET + ++ + E +A+ A R+ SG G
Sbjct: 128 SLIE-DDFAALGNGARTAIGLIETGYSSSITVKEAKELAIKAIKEAIARDPTSGDG 182
>gi|301108459|ref|XP_002903311.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
gi|262097683|gb|EEY55735.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
Length = 247
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 10/185 (5%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+++A+ G++ V +A D R + L+ + K+ ++ +G PG D +
Sbjct: 42 FNGGTVLAIAGEDFVVVAGDTRLSTGYSILSRDESKLHELTPTTVLGCPGSHNDIIQLRG 101
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ R +Y+ M+ + ++ N LY RRF PY+ ++ G+D E + ++ D
Sbjct: 102 VLSIRAQMYQHDNETSMTSSAMSQLLMNTLYSRRFFPYYAFCILCGID-ENGKGVVYTYD 160
Query: 126 LIGCVNQPSDFVVGG------PCSDQLYGMCETLWEPN--LEPDDLFETIAQALVNACER 177
IG ++ + G P D L +T +P L + + I A + A ER
Sbjct: 161 AIGSYDRVTRAAQGSGGHLMIPLLDNLVEH-DTRTDPKKALTLQETKDIIKDAFITAGER 219
Query: 178 NAVSG 182
+ +G
Sbjct: 220 DIYTG 224
>gi|448685100|ref|ZP_21693110.1| proteasome subunit beta [Haloarcula japonica DSM 6131]
gi|445782303|gb|EMA33150.1| proteasome subunit beta [Haloarcula japonica DSM 6131]
Length = 230
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V ++ +N V IA D+R + G +++ QK+ Q+ + L G Q+ +
Sbjct: 35 GTTTVGLSTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAMTLVGSVGGAQSFIRS 94
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMD 125
+R +LYE++ + +S L + N R GPYF + P+V G+D E + + ++D
Sbjct: 95 LRAEADLYEVRRDEPLSIHALATLAGNFA---RGGPYFAINPIVGGVDEEGSH--VYSVD 149
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
G V + D+ V G + G E ++P + + + +A+ A ER+ SG G
Sbjct: 150 PAGGVLE-DDYTVTGSGTMVATGTIEGQYDPEMSLSEARDLAIRAVNAAAERDTGSGNGV 208
Query: 186 VVYIIEQDKVTV 197
V+ I + V +
Sbjct: 209 VLAEITDEGVEI 220
>gi|448630993|ref|ZP_21673448.1| proteasome subunit beta [Haloarcula vallismortis ATCC 29715]
gi|445755367|gb|EMA06757.1| proteasome subunit beta [Haloarcula vallismortis ATCC 29715]
Length = 230
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V ++ +N V IA D+R + G +++ QK+ Q+ + L G Q+ +
Sbjct: 35 GTTTVGLSTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAMTLVGSVGGAQSFIRS 94
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMD 125
+R +LYE++ + +S L + N R GPYF + P+V G+D E + + ++D
Sbjct: 95 LRAEADLYEVRRDEPLSIHALATLAGNFA---RGGPYFAINPIVGGVDEEGSH--VYSVD 149
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
G V + D+ V G + G E ++P + + + +A+ A ER+ SG G
Sbjct: 150 PAGGVLE-DDYTVTGSGTMVATGTIEGQYDPEMSLSEARDLAIRAVNAAAERDTGSGNGV 208
Query: 186 VVYIIEQDKVTV 197
V+ I + V +
Sbjct: 209 VLAEITDEGVEI 220
>gi|448681225|ref|ZP_21691358.1| proteasome subunit beta [Haloarcula argentinensis DSM 12282]
gi|445767758|gb|EMA18851.1| proteasome subunit beta [Haloarcula argentinensis DSM 12282]
Length = 230
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V ++ +N V IA D+R + G +++ QK+ Q+ + L G Q+ +
Sbjct: 35 GTTTVGLSTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAMTLVGSVGGAQSFIRS 94
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMD 125
+R +LYE++ + +S L + N R GPYF + P+V G+D E + + ++D
Sbjct: 95 LRAEADLYEVRRDEPLSIHALATLAGNFA---RGGPYFAINPIVGGVDEEGSH--VYSVD 149
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
G V + D+ V G + G E ++P + + + +A+ A ER+ SG G
Sbjct: 150 PAGGVLE-DDYTVTGSGTMVATGTIEGQYDPEMSLSEARDLAIRAVNAAAERDTGSGNGV 208
Query: 186 VVYIIEQDKVTV 197
V+ I + V +
Sbjct: 209 VLAEITDEGVEI 220
>gi|354611438|ref|ZP_09029394.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
gi|353196258|gb|EHB61760.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
Length = 243
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 8/188 (4%)
Query: 17 KNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYE 75
++ V +A D R + G +++ N QK+ ++ + + + G +Q + +R NLYE
Sbjct: 57 EDGVVMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGSQAFIRSLRAEANLYE 116
Query: 76 LKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPS 134
+ MS L M SN+L R GP+F V P++ G+D E A + ++D G +
Sbjct: 117 ARRGEYMSINALSTMASNLL---RGGPFFLVVPILGGVDEEGAH--VYSLD-PGGSSMSD 170
Query: 135 DFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
+ G G+ E + +L ++ AQA+ +A ER+ SG G + I D
Sbjct: 171 KYTAQGSGMPYALGVLEQEYTDDLTMEEAERVGAQAVQSASERDTASGNGIHITRITADG 230
Query: 195 VTVRHVKT 202
+T+ KT
Sbjct: 231 ITIVGHKT 238
>gi|393229883|gb|EJD37498.1| proteasome subunit [Auricularia delicata TFB-10046 SS5]
Length = 242
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTV 63
T NGG+I+A+ G + +A D R +G ++ + K+F++ + + G A D
Sbjct: 10 TENGGTILAVAGADFAVVAGDTR-QTEGYSIQTRYAPKVFRLTDKAVLAVNGFAADGNMF 68
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+K++ R Y ++ M + + MI MLY +RF PY+V ++ G+D E + +
Sbjct: 69 VKKVKQRLEWYRHAHSKDMPLQSIARMIQTMLYAKRFFPYYVYNILGGID-EQGVGAVYS 127
Query: 124 MDLIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEP-NLEPDDLFETIAQALVNAC 175
D +G + + G S +Q+Y + P +L D + + A A
Sbjct: 128 FDPVGSYERETCRAAGAAQSLVQPFLDNQIYFKNQQGDHPAHLPLDHVLSLVTDAFTGAT 187
Query: 176 ERNAVSGWGAVVYII 190
ER+ G G +++I
Sbjct: 188 ERHIEVGDGLQMFVI 202
>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 205
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 9 GSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIR 68
G+ V + + V +A +KR T + + +K+F+V ++ + G+ D Q + + +
Sbjct: 10 GTAVGIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGMASIGILADMQVLTKIAK 69
Query: 69 FRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIG 128
+LY L + S + ++S +L+ R PYFVE +V G+D E I MD +G
Sbjct: 70 AYMSLYSLDTKTRPSIRSAAKLLSYVLFSNRILPYFVEVLVGGIDDEGPHLFI--MDALG 127
Query: 129 CVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
+ + D+ G + + E+ ++P + + + +A+ + R+ VSG G
Sbjct: 128 SLIE-DDYAAVGTGTKLAIAILESNYKPGMSIKEARDLAIKAINQSISRDPVSGDG 182
>gi|167393146|ref|XP_001740446.1| proteasome subunit beta type-1 [Entamoeba dispar SAW760]
gi|165895460|gb|EDR23141.1| proteasome subunit beta type-1, putative [Entamoeba dispar SAW760]
Length = 221
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 5/187 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
N G+ V + G++ V +A D R L N KI+ + S G+ D + + +
Sbjct: 22 NCGTCVVIKGEDFVVVASDTRMSRDYMILTRNDSKIYPLTSKCIFTGSGMRADMKELTDQ 81
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
I+ Y+ + ++MS + + ++SN LY RF PY+ ++ G++ + + + N D
Sbjct: 82 IKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSK-GKAVTYNYDA 140
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQA---LVNACERNAVSGW 183
+G + + G + Y + ++L + EP E I A + +ACER+ +G
Sbjct: 141 VGSFEERK-YSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACERDIHTGD 199
Query: 184 GAVVYII 190
+ I+
Sbjct: 200 NVEIVIL 206
>gi|357148563|ref|XP_003574814.1| PREDICTED: proteasome subunit beta type-1-like [Brachypodium
distachyon]
Length = 219
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L+ KI + + G D + + +
Sbjct: 10 NGGTCVAVAGADYCVVAADTRLSVGYSILSRAHSKIAHLADKCVLASSGFQGDIKALQKN 69
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ ++ +YE N+KMS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 70 LTAKELVYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 129
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + G Q + + P D L P L + + + +A
Sbjct: 130 GSYERTGYSAQGTGATLMMPVLDNQLKSPSPLLLPARDAVTPLSESEAVDLVKDVFASAT 189
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + +I ++ R D
Sbjct: 190 ERDIYTGDSVEIVVINSSGTHRECIELRKD 219
>gi|357454307|ref|XP_003597434.1| Proteasome subunit beta type [Medicago truncatula]
gi|355486482|gb|AES67685.1| Proteasome subunit beta type [Medicago truncatula]
Length = 231
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 17/213 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VA+ G + IA D R L ++ KI + + G D + + +
Sbjct: 22 NGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQKV 81
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 82 LSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAV 141
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEP---------NLEPDDLFETIAQALV 172
G+ + +G +Q S + P D L P E DL +T+
Sbjct: 142 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTV---FA 198
Query: 173 NACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ +G + I+ + + R D
Sbjct: 199 SATERDIYTGDKVEIVILNAGGIHREFMDLRKD 231
>gi|357492211|ref|XP_003616394.1| Proteasome subunit beta type [Medicago truncatula]
gi|355517729|gb|AES99352.1| Proteasome subunit beta type [Medicago truncatula]
Length = 223
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 17/213 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VA+ G + IA D R L ++ KI + + G D + + +
Sbjct: 14 NGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQKV 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEP---------NLEPDDLFETIAQALV 172
G+ + +G +Q S + P D L P E DL +T+
Sbjct: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSETEAVDLVKTV---FA 190
Query: 173 NACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ +G + I+ + + R D
Sbjct: 191 SATERDIYTGDKVEIVILNASGIHRDFMDLRKD 223
>gi|433591793|ref|YP_007281289.1| proteasome endopeptidase complex, archaeal, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|448334129|ref|ZP_21523310.1| proteasome endopeptidase complex, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|433306573|gb|AGB32385.1| proteasome endopeptidase complex, archaeal, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|445620471|gb|ELY73968.1| proteasome endopeptidase complex, beta subunit [Natrinema
pellirubrum DSM 15624]
Length = 243
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRAEVNLYEA 117
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ MS + L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 118 RRGENMSIEALATLAGNFA---RGGPFFAIHPILGGVDDEGSH--VYSIDPAGGVME-DD 171
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG E +EP++ ++ A+ + +A ER+ SG G + I + V
Sbjct: 172 YTVTGSGMQLAYGHLEQAYEPDMSTEEAKTVAARGIKSAVERDTGSGNGVFLCEITDEGV 231
Query: 196 TVR 198
+
Sbjct: 232 DIH 234
>gi|17380185|sp|O82531.1|PSB1_PETHY RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3608485|gb|AAC35983.1| proteasome beta subunit [Petunia x hybrida]
Length = 223
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 11/210 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + IA D R L ++ KI ++ + G D + + +
Sbjct: 14 NGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMASSGFQADVRALQKV 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ + +G +Q S + P D L P L + + + +A
Sbjct: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAIDLVKTCFASAT 193
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + I+ + ++ R D
Sbjct: 194 ERDIYTGDRLEIVILNASGIRREEMELRKD 223
>gi|448318372|ref|ZP_21507896.1| proteasome endopeptidase complex, beta subunit [Natronococcus
jeotgali DSM 18795]
gi|445599135|gb|ELY53174.1| proteasome endopeptidase complex, beta subunit [Natronococcus
jeotgali DSM 18795]
Length = 243
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + + G Q+ +R NLYE
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTAALTMVGSVGGAQSFISSLRAEVNLYEA 117
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ MS L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 118 RRGEHMSMDALATLAGNFA---RGGPFFAIHPILGGVDAEGSH--VYSIDPAGGVME-DD 171
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG E +E ++ D+ A+++ +A ER+ SG G + I ++ V
Sbjct: 172 YTVTGSGMQLAYGHLEQAYEDDMSNDEAKTVAARSIKSAAERDTGSGNGVFLCEITEEGV 231
Query: 196 TVR 198
+
Sbjct: 232 DIH 234
>gi|448738995|ref|ZP_21721015.1| proteasome subunit beta [Halococcus thailandensis JCM 13552]
gi|445800809|gb|EMA51157.1| proteasome subunit beta [Halococcus thailandensis JCM 13552]
Length = 232
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 14 MTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNL 73
+T V +A D R + N +KI QV S + + G + Q++ + +R L
Sbjct: 44 LTAAEGVVLAADMRASAGNMVASKNARKILQVHSSAALTISGSVSAAQSLVESLRAEVRL 103
Query: 74 YELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQP 133
YE + + MS L + +N+L F V+P++ G+D E A I ++ G V +
Sbjct: 104 YETRRDTAMSLNALANLTANLLRSGNF--QIVQPVLGGVDDEGAH--IYSIGPGGSVMEE 159
Query: 134 SDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
+ + G S G+ E ++ DD T A+A+ +A ER+ SG G + I +
Sbjct: 160 T-YAASGSGSPFALGVLEGEYDEEASVDDAETTAARAVQSATERDTASGNGLSLATITDE 218
Query: 194 KVTV 197
V +
Sbjct: 219 GVDI 222
>gi|448328326|ref|ZP_21517639.1| proteasome endopeptidase complex, beta subunit [Natrinema
versiforme JCM 10478]
gi|445616132|gb|ELY69764.1| proteasome endopeptidase complex, beta subunit [Natrinema
versiforme JCM 10478]
Length = 243
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 58 DGVIIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRAEVNLYEA 117
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ MS L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 118 RRGEGMSIDALATLAGNFA---RGGPFFAIHPILGGVDEEGSH--VYSIDPAGGVME-DD 171
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG E +EP++ ++ A+ + +A ER+ SG G + I + V
Sbjct: 172 YTVTGSGMQLAYGHLEQAYEPDMSNEEAKTVAARGIKSAVERDTGSGNGVFLAEITDEGV 231
Query: 196 TVR 198
+
Sbjct: 232 DIH 234
>gi|448345261|ref|ZP_21534158.1| proteasome endopeptidase complex, beta subunit [Natrinema altunense
JCM 12890]
gi|445635259|gb|ELY88429.1| proteasome endopeptidase complex, beta subunit [Natrinema altunense
JCM 12890]
Length = 243
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 58 DGVIIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRAEVNLYEA 117
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ MS L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 118 RRGEGMSIDALATLAGNFA---RGGPFFAIHPILGGVDDEGSH--VYSIDPAGGVME-DD 171
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG E +EP++ ++ A+ + +A ER+ SG G + I + V
Sbjct: 172 YTVTGSGMQLAYGHLEQAYEPDMSNEEAKTVAARGIKSAVERDTGSGNGVFLAEITDEGV 231
Query: 196 TVR 198
+
Sbjct: 232 DIH 234
>gi|432328820|ref|YP_007246964.1| proteasome endopeptidase complex, archaeal, beta subunit
[Aciduliprofundum sp. MAR08-339]
gi|432135529|gb|AGB04798.1| proteasome endopeptidase complex, archaeal, beta subunit
[Aciduliprofundum sp. MAR08-339]
Length = 225
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Query: 17 KNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
K+ V + + R ++ QK++++ ++ + GL D Q + + +R NLY +
Sbjct: 31 KDGVVLGTEHRASMETFIAHKTAQKLYRLDYNIGMTTAGLVGDLQVLVRYMRAEINLYRI 90
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDF 136
+ M ++SN+L ER+F PY+V +V G D + +D G + +
Sbjct: 91 RRKMYMPVGAAATLLSNILNERKFFPYYVGLLVGGFDDRGYH--VYAIDAAGGAIEDK-Y 147
Query: 137 VVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
G S +YG+ E W ++ D+ E + + + A R+A SG G V I +++
Sbjct: 148 ASVGSGSLFVYGVLEDRWHDDIGLDEGIELVIRGINAAMRRDAASGDGISVATITKER 205
>gi|10121721|gb|AAG13340.1|AF266220_1 proteasome subunit beta type 1 [Gillichthys mirabilis]
Length = 181
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDT 60
S +NGG+++A+ G++ +A D R + + + K +++ +G G D
Sbjct: 14 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 73
Query: 61 QTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE----- 115
T+ + I R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E
Sbjct: 74 LTLTKIIDARLKMYKHSNNKMMTCGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAS 133
Query: 116 TAEPI 120
TA P+
Sbjct: 134 TALPV 138
>gi|300120426|emb|CBK19980.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG++ A+ GK+ V IA D R L+ N ++ + S +G G TD T+ +
Sbjct: 2 NGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRT 61
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + Y+ ++S + A++SN LY RRF P + ++ GLD E + +I + D
Sbjct: 62 LEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLD-ENGQGVIYSYDA 120
Query: 127 IG 128
IG
Sbjct: 121 IG 122
>gi|146186065|ref|XP_001032955.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|146143157|gb|EAR85292.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 247
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+N G++ A+ + V +A DKR + ++ + K+ ++ ++++ G+ D + +
Sbjct: 41 FNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSGMYADFAALSK 100
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
++ R ++Y+ ++ + + + +++S LY +RF PY+ ++ G D + E ++ N D
Sbjct: 101 QLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFD-DKGEGLVINYD 159
Query: 126 LIGCVNQPSDFVVGG------PCSDQLYGMCETLWEPNLEP-DDLFETIAQALVNACERN 178
+G + V+G P DQ + + + L ++ I +A ER+
Sbjct: 160 AVGSGDFKKYAVLGSGAQLITPVFDQYFEGYNKIKKEQLHTVEEFISFIVDCFESATERD 219
Query: 179 AVSGWGAVVYIIEQDKV 195
+G + I+ +DK
Sbjct: 220 IYTGDQLEIVILRKDKA 236
>gi|50427419|ref|XP_462322.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
gi|49657992|emb|CAG90828.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
Length = 242
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 32/223 (14%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+++ + G++ +A D R + G ++ ++ KIF VG + + G A D +
Sbjct: 28 NGGTVLGIAGEDFSVLAGDTR-QVVGYSINSRYEPKIFDVGDDIAMTANGFAADGAALID 86
Query: 66 KIRFRQNLYELKEN-RKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI---- 120
+ R + Y+ +K+S K I ++LY +RF PY+V ++ GLD E +
Sbjct: 87 RFRNQLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPYYVSTLIAGLDDEGKGAVYSYD 146
Query: 121 -IGNMDLIGC-----------------VNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDD 162
+G+ + C VN + FV G +++ E + L D+
Sbjct: 147 PVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQFVPGTNGTEK----KELRY---LSLDE 199
Query: 163 LFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ + + A +A ER+ G G ++II +D + + + D
Sbjct: 200 VLQLVKDAFSSATERHIYVGDGLEIFIITKDGIRKEYYPLKRD 242
>gi|15920692|ref|NP_376361.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574726|sp|Q975D1.1|PSB2_SULTO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|15621475|dbj|BAB65470.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 207
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 94/191 (49%), Gaps = 12/191 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQ 65
G + V + K+ V +A D+R G +A + +K+ V ++ + G D Q +Y
Sbjct: 12 TGTTTVGIKVKDGVVLAADRRAS-AGMYVAHKYVRKVLYVAPNIGITTAGSVADLQFIYD 70
Query: 66 KIRFRQNLYELKENRKMSP---KVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIG 122
++ N+Y M P K L ++NML ++ PY V+ ++ G+D +P +
Sbjct: 71 LLK---NIYHYNLITGMRPITIKALATYLANMLSFSKYLPYIVQILIGGVDE---QPRLY 124
Query: 123 NMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSG 182
N+D +G + + D+ G S + G+ E + P++ D+ + +A+ ++ +R+ +G
Sbjct: 125 NLDYVGDITE-EDYTATGSGSVEAIGVIEDEYRPDMTLDEAADLARRAIFSSIKRDPYTG 183
Query: 183 WGAVVYIIEQD 193
G +V I ++
Sbjct: 184 TGVIVSKITKN 194
>gi|397775022|ref|YP_006542568.1| proteasome endopeptidase complex, beta subunit [Natrinema sp. J7-2]
gi|448343846|ref|ZP_21532763.1| proteasome endopeptidase complex, beta subunit [Natrinema gari JCM
14663]
gi|397684115|gb|AFO58492.1| proteasome endopeptidase complex, beta subunit [Natrinema sp. J7-2]
gi|445621929|gb|ELY75394.1| proteasome endopeptidase complex, beta subunit [Natrinema gari JCM
14663]
Length = 243
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 58 DGVIIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRAEVNLYEA 117
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ +M+ L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 118 RRGERMNIDALATLAGNFA---RGGPFFAIHPILGGVDDEGSH--VYSIDPAGGVME-DD 171
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG E +EP++ ++ A+ + +A ER+ SG G + I + V
Sbjct: 172 YTVTGSGMQLAYGHLEQAYEPDMSNEEAKTVAARGIKSAVERDTGSGNGVFLAEITDEGV 231
Query: 196 TVR 198
+
Sbjct: 232 DIH 234
>gi|300120472|emb|CBK20026.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG++ A+ GK+ V IA D R L+ N ++ + S +G G TD T+ +
Sbjct: 2 NGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRT 61
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + Y+ ++S + A++SN LY RRF P + ++ GLD E + +I + D
Sbjct: 62 LEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLD-ENGQGVIYSYDA 120
Query: 127 IG 128
IG
Sbjct: 121 IG 122
>gi|363755242|ref|XP_003647836.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891872|gb|AET41019.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
Length = 242
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+I+ + G++ IA D R + + N K+F G ++ + G A D + +K
Sbjct: 28 NGGTILGIAGEDFAVIAGDTRHTTGYSINSRNEPKVFDCGDNILISANGFAADGDALVKK 87
Query: 67 IRFRQNLYELKE-NRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ Y N+KM+ K I ++LY +R PY+V ++ GLD E + + + D
Sbjct: 88 FKNNLKWYHFDHNNKKMTLKSAARNIQHLLYGKRMFPYYVHTIIAGLD-EDGKGAVYSFD 146
Query: 126 LIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPN-----------LEPDDLFETI 167
+G + G S +Q+ + +EP+ L D++ E +
Sbjct: 147 PVGSYEREQCRAGGAAASIIMPFLDNQV--NFKNQYEPDSKGTKPKSIRFLSLDEVIELV 204
Query: 168 AQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A +A ER+ G + II ++ V + + D
Sbjct: 205 RDAFTSATERHIHVGDSLQIMIITKEGVKEEYHSLKKD 242
>gi|403412828|emb|CCL99528.1| predicted protein [Fibroporia radiculosa]
Length = 252
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTV 63
T NGG+I+A+ G + IA D R +G ++ + K+F++ + + G A D
Sbjct: 18 TENGGTILAIAGADFTVIAGDTRQS-EGYSIQTRYAPKVFRLTERAVLAVNGFAADGNMF 76
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+K++ R Y ++M + + +I MLY +RF PY+V ++ G++ E + +
Sbjct: 77 VKKVKQRLEWYRHAHAKEMPLRAIARLIQTMLYAQRFFPYYVYNILGGIE-EDGSGAVYS 135
Query: 124 MDLIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPNLEP-----DDLFETIAQAL 171
D +G + + G S +Q+Y +T + P +D+ + +
Sbjct: 136 FDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPAAGSSHPTHLPLNDVLSIVIDSF 195
Query: 172 VNACERNAVSGWGAVVYII 190
+A ER+ G G +Y++
Sbjct: 196 TSATERHIEVGDGLEIYVV 214
>gi|322368956|ref|ZP_08043523.1| proteasome endopeptidase complex, beta subunit [Haladaptatus
paucihalophilus DX253]
gi|320551687|gb|EFW93334.1| proteasome endopeptidase complex, beta subunit [Haladaptatus
paucihalophilus DX253]
Length = 205
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 8/181 (4%)
Query: 20 VAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKE 78
V +A D+R + G + + QK+ V + + G D Q+ + +R +LYE +
Sbjct: 21 VLLAADRRASLGGRFVTNKAVQKVQGVHPTAALTMAGGVGDLQSYIRTLRAEASLYETRR 80
Query: 79 NRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFV 137
+ L + +L E GPY +P + G+D P + ++D G V + +D+
Sbjct: 81 GEPIDMAALSTLAGTLLRE---GPYRGAQPTLGGVD--RTGPHVYDLDTAGGVME-ADYH 134
Query: 138 VGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTV 197
G YG+ E +EPNL D A A+ +A ER+ SG G V + D V +
Sbjct: 135 ASGSGMQLAYGVLEREFEPNLPTDVARRVAANAIESAIERDTASGNGLTVATVSADGVEI 194
Query: 198 R 198
R
Sbjct: 195 R 195
>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
gi|74551014|sp|Q8TJB5.1|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
Length = 210
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + + + +A ++R + + +K++Q+ + + G D Q + + +
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
LY+++ N M+ K + ++SN L R+ P V+ ++ G+D P I ++D +
Sbjct: 69 SVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGVDKNG--PAIYSLDAM 126
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + G S YG+ E ++ ++ + + +A+ NA +R++ SG V
Sbjct: 127 GGSIEETRISATGSGSPMAYGVLEDQYKEDIAVKEGLDLAIRAIHNAMKRDSASGENIDV 186
Query: 188 YIIEQD---KVTVRHVKTRMD 205
+I ++ ++ VK+R D
Sbjct: 187 VVITKEAFKRLDPEEVKSRRD 207
>gi|50308397|ref|XP_454200.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643335|emb|CAG99287.1| KLLA0E05633p [Kluyveromyces lactis]
Length = 240
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+I+ + G++ +A D R + + K+F+ ++ + G A D + + ++
Sbjct: 27 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFECEDNILISANGFAADGEALVKR 86
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ Q Y N+K++ K I ++LY +R PY+V ++ GLD E + +
Sbjct: 87 FKNSQMWYHFNHNKKLTIKSAARNIQHLLYGKRMFPYYVHTIIAGLDEEGKGAVYSFDPV 146
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN-----------LEPDDLFETIAQA 170
G+ + C S + P D + + +EP+ L +++ + + A
Sbjct: 147 GSYEREQCRAGGSAASLIMPFLDNQVNL-KNQYEPDSNGTKRKEVKYLGVEEVIKLVRDA 205
Query: 171 LVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A ER+ G G + I+ +D V + + D
Sbjct: 206 FTSATERHINVGDGLEILIVTKDGVRKEYFDLKRD 240
>gi|70606695|ref|YP_255565.1| proteasome beta subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066918|ref|YP_007434000.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449069190|ref|YP_007436271.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
gi|121725055|sp|Q4JAA8.1|PSB2_SULAC RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|68567343|gb|AAY80272.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
639]
gi|449035426|gb|AGE70852.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449037698|gb|AGE73123.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
Length = 203
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQ 65
G + V + K+ V +A D+R G +A + +K+ V ++ + G D Q +Y+
Sbjct: 9 KGTTTVGIKVKDGVVLAADRRAS-AGYYVAHKYVRKVLYVTDNIGITTAGSVADLQFIYE 67
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+++ + + ++ K + ++N+L ++ PY V+ ++ G+D +P + N+D
Sbjct: 68 ALKYIYHRNSITGEGPITVKGIATWLANVLSSSKYFPYLVQILIGGVDD---QPRLYNLD 124
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G + + ++ G S + G+ E ++P + D+ E +A+ ++ +R++ +G G
Sbjct: 125 YLGDITE-EEYTATGSGSPEALGVLEDNYKPEMSLDEAAELAKRAIFSSIKRDSFTGTGV 183
Query: 186 VVYIIEQD 193
+V I ++
Sbjct: 184 IVTKITKN 191
>gi|126274560|ref|XP_001387579.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213449|gb|EAZ63556.1| proteasome subunit [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+++ + G++ +A D R ++G ++ +Q K+F VG + + G A D +
Sbjct: 28 NGGTVLGIAGEDFAVLAGDTR-QVEGYSIQSRYQPKVFNVGDDIVMTANGFAADGAALID 86
Query: 66 KIRFRQNLYELKEN-RKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+ + + Y+ +K++ K I ++LY +RF PY+V ++ GLD E + + +
Sbjct: 87 RFKNQLQWYKFDHGGKKLNIKSAARYIQHLLYGKRFFPYYVSTLIAGLDEE-GKGAVYSY 145
Query: 125 DLIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPN-----------LEPDDLFET 166
D +G + G S +Q+ + +EP L D++ E
Sbjct: 146 DPVGSYEREQCRAGGAAASLIMPFLDNQV--NFKNQYEPGSDGKKKRELRYLTLDEVLEL 203
Query: 167 IAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ A +A ER+ G G + I+ ++ V + + D
Sbjct: 204 VRDAFSSATERHIQVGDGLEILIVTKEGVRTEYFDLKRD 242
>gi|388496148|gb|AFK36140.1| unknown [Medicago truncatula]
Length = 237
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 17/190 (8%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGGS VA+ G + IA D R L ++ KI + + G D + + +
Sbjct: 14 NGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQKV 73
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 74 LSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAV 133
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEP---------NLEPDDLFETIAQALV 172
G+ + +G +Q S + P D L P E DL +T+
Sbjct: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTV---FA 190
Query: 173 NACERNAVSG 182
+A ER+ +G
Sbjct: 191 SATERDIYTG 200
>gi|448727988|ref|ZP_21710328.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
gi|445788654|gb|EMA39360.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
Length = 225
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 5/186 (2%)
Query: 12 VAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQ 71
V +T V +A D R + N +KI Q+ S + + G + Q++ + +R
Sbjct: 35 VGLTAAEGVVLAADMRASAGNMVASKNARKILQIHSSAALTISGSVSAAQSLVESLRAEV 94
Query: 72 NLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVN 131
LYE + + MS L + +N L F V+P++ G+D E A + ++ G V
Sbjct: 95 RLYETRRDTTMSLNALANVTANRLRSGNF--QIVQPVLGGVDDEGAH--VYSIGPGGSVM 150
Query: 132 QPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIE 191
+ + + G S G+ E ++ DD T A+A+ +A ER+ SG G + I
Sbjct: 151 EET-YAASGSGSPFALGVLEGEYDEEASVDDARTTAARAVQSATERDTASGNGLSLATIT 209
Query: 192 QDKVTV 197
++ V +
Sbjct: 210 EEGVDI 215
>gi|448609025|ref|ZP_21660304.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
gi|445747402|gb|ELZ98858.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
Length = 243
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V + V +A D R + + + QK+ +V + + G + Q++
Sbjct: 46 TKTGTTTVGIKTDEGVVLATDMRASLGPMVSSKDVQKVEEVHPTGALTIAGSVSAAQSLI 105
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
+R LYE + MS + L ++ N L R G Y V+P++ G+D + A I ++
Sbjct: 106 SSLRAEVRLYESRRGEDMSMQALSTLVGNFL--RTGGFYIVQPILGGVDDDGAH--IYSI 161
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + + ++ V G S G+ E + +L D+ + +A+ +A ER+ SG G
Sbjct: 162 DPAGSILEE-EYTVTGSGSQYALGVLEQEFSDDLSIDEAKQVATKAIRSAVERDLASGNG 220
Query: 185 AVVYIIEQDKVTV-RH 199
+ ++ + V + RH
Sbjct: 221 INIAVVTDEGVDIQRH 236
>gi|448362754|ref|ZP_21551358.1| proteasome endopeptidase complex subunit beta [Natrialba asiatica
DSM 12278]
gi|445647376|gb|ELZ00350.1| proteasome endopeptidase complex subunit beta [Natrialba asiatica
DSM 12278]
Length = 243
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 8/183 (4%)
Query: 17 KNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYE 75
++ V IA D R + G +++ N QK+ Q+ + + G Q+ +R NLY
Sbjct: 57 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTMVGSVGGAQSFISSLRAEVNLYG 116
Query: 76 LKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPS 134
+ MS L + N R GP+F + P++ G+D E + + ++D G V +
Sbjct: 117 ARRGEAMSIDALATLAGNFA---RGGPFFAIHPILGGVDSEGSH--VYSIDPAGGVME-D 170
Query: 135 DFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
D+ V G YG+ E +E L DD A+A+ +A ER+ SG G + I +
Sbjct: 171 DYTVTGSGMQLAYGLLEQEYEDGLSNDDATTIAARAIKSAAERDTGSGNGVFLCEITDEG 230
Query: 195 VTV 197
V +
Sbjct: 231 VEI 233
>gi|328868192|gb|EGG16572.1| proteasome subunit beta type 1 [Dictyostelium fasciculatum]
Length = 236
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 9/208 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTAL-ADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+++A+ G N +A D R G + ++ K+F++ + G+ DT + +
Sbjct: 29 NGGTVLAVAGSNYCIVAGDTRMSDGGYGIQTRHYTKVFKLTDKCVIATSGMQADTIALRK 88
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPET-----AEPI 120
++ + YE + MS + +SN LY +RF P++ +V G+D +
Sbjct: 89 RLDTQLRQYERDHGKSMSTPAIAQFLSNTLYHKRFFPFYTFNLVAGVDEDGIGCVWTYDA 148
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGMC--ETLWEPN-LEPDDLFETIAQALVNACER 177
+G+ + + +Q S + P D G + + P L + + A+ +A ER
Sbjct: 149 VGSHERVRFSSQGSGNQLIQPLLDNQVGKFNQQIVDGPRELSAEQALSLVKDAITSAGER 208
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G A + I+Q V ++D
Sbjct: 209 DIYTGDFADIVTIDQKGVHFEKFDLKLD 236
>gi|448729602|ref|ZP_21711917.1| proteasome subunit beta [Halococcus saccharolyticus DSM 5350]
gi|445794904|gb|EMA45442.1| proteasome subunit beta [Halococcus saccharolyticus DSM 5350]
Length = 232
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V +T + V +A D R + + +K+ +V + + G + Q++ +
Sbjct: 38 GTTTVGLTAEGGVVLAADMRASAGNMVASKDARKVLEVHPTAALTIAGSVSAAQSLVNSL 97
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
+ LYE + + MS + L + +N+L F + V+P++ G+D + + + ++
Sbjct: 98 QAEVRLYETRRDTGMSLEALANLTANLLRSGNF--HIVQPVLGGVDDDGSH--VYSIGPG 153
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G V D+ V G S G+ E ++ + DD A+A+ +A ER+ SG G +
Sbjct: 154 GSV-MAEDYAVSGSGSPFALGVLEQEYDEGMSVDDAETIAARAVQSATERDTASGNGLTL 212
Query: 188 YIIEQDKVTV 197
I D VT+
Sbjct: 213 ATITADGVTI 222
>gi|443895548|dbj|GAC72894.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7 [Pseudozyma
antarctica T-34]
Length = 292
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGGSI A+ G + IA D R G + ++ K+F++ + G A D + +
Sbjct: 35 NGGSIAAVCGSDFCVIASDTRQST-GYNIQTRYKPKVFRLNDKATLATNGFAADAEALVS 93
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+IR R +Y R M + MIS MLY +RF PY+V ++ GLD E + + + D
Sbjct: 94 RIRQRLEMYRHAHGRSMPLHSIARMISTMLYGKRFFPYYVYNILGGLD-EQGKGAVYSFD 152
Query: 126 LIGC 129
+G
Sbjct: 153 PVGS 156
>gi|353238864|emb|CCA70796.1| probable PRE7-20S proteasome subunit(beta6) [Piriformospora indica
DSM 11827]
Length = 250
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTV 63
T NGG+I+A+ G++ IA D R +G + + K+F++ + + G A D
Sbjct: 12 TENGGTILAIAGQDFTVIAGDTRQS-EGYNIQTRYAPKVFRLTDKAVLAVNGFAADGNMF 70
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
QK++ R Y+ N++M + + +I MLY +RF PY+V ++ G++ + + + +
Sbjct: 71 VQKVQQRLEWYQHAHNKEMPLRAIARLIQTMLYAKRFFPYYVYNILGGIEDDGSGAVY-S 129
Query: 124 MDLIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPNLEPDDL-----FETIAQAL 171
D +G + + G S +Q+Y + P L + +
Sbjct: 130 FDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQLPPSGGAHPKHLPLKEVLSLVIDSF 189
Query: 172 VNACERNAVSGWGAVVYIIEQDK 194
A ER+ G G +YI+ K
Sbjct: 190 TGATERHIEVGDGLEIYIVTASK 212
>gi|323445273|gb|EGB01969.1| hypothetical protein AURANDRAFT_9896 [Aureococcus anophagefferens]
Length = 150
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+ +A++G + +A D R + + K+ Q+G + + G TD +
Sbjct: 6 FNGGTTLAISGADFAVVAADTRMSTGYSIMTRKMSKLHQLGPNTVLAAAGCQTDVVCLVD 65
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
++ RQ +Y+ + + M+ + M+ N LY +RF PY+ ++ G+D E + + + D
Sbjct: 66 VLKTRQKMYKHQTGKNMTTTSIAQMLGNTLYYKRFFPYYAFNVLAGVDKE-GKGCVYSYD 124
Query: 126 LIG 128
IG
Sbjct: 125 AIG 127
>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|385804032|ref|YP_005840432.1| proteasome subunit beta [Haloquadratum walsbyi C23]
gi|121689658|sp|Q18GX3.1|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
gi|339729524|emb|CCC40787.1| proteasome beta subunit [Haloquadratum walsbyi C23]
Length = 243
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T G + V + ++ +A D R + + + QK+ ++ + + G + Q++
Sbjct: 46 TKTGTTTVGLKTQDGTVLATDMRASLGRMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLI 105
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
IR LYE + MS + L ++ N L R G + V+P++ G+D + P I ++
Sbjct: 106 SSIRAEVRLYEARRGEDMSMEALSTLLGNFL--RSGGFFIVQPILGGVDDDG--PHIYSI 161
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
D G + + ++ V G S G+ E + +L ++ A+++ +A ER+ SG G
Sbjct: 162 DPAGSIIE-EEYTVTGSGSQYALGVLEQQYNEDLSIEEAKTVAARSIESAVERDLASGNG 220
Query: 185 AVVYIIEQDKVTV 197
V ++ +D V +
Sbjct: 221 INVCVVTEDGVEI 233
>gi|383625306|ref|ZP_09949712.1| proteasome endopeptidase complex subunit beta [Halobiforma
lacisalsi AJ5]
gi|448700286|ref|ZP_21699394.1| proteasome endopeptidase complex, beta subunit [Halobiforma
lacisalsi AJ5]
gi|445779826|gb|EMA30741.1| proteasome endopeptidase complex, beta subunit [Halobiforma
lacisalsi AJ5]
Length = 243
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 17 KNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYE 75
++ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 57 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRAEVNLYE 116
Query: 76 LKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPS 134
+ MS + L + N R GP+F + P++ G+D E + + ++D G V +
Sbjct: 117 SRRGEDMSIEALANLAGNFA---RGGPFFAIHPILGGVDDEGSH--VFSIDPAGGVME-D 170
Query: 135 DFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
D+ V G YG E +E +L D+ A+++ +A ER+ SG G + I +
Sbjct: 171 DYTVTGSGMQLAYGHLEQSYEDDLSNDEATTIAARSIKSAAERDTGSGNGVFLCEITDEG 230
Query: 195 VTVR 198
V +
Sbjct: 231 VDIH 234
>gi|429193506|ref|YP_007179184.1| proteasome endopeptidase complex subunit beta [Natronobacterium
gregoryi SP2]
gi|429137724|gb|AFZ74735.1| proteasome endopeptidase complex, archaeal, beta subunit
[Natronobacterium gregoryi SP2]
Length = 242
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 17 KNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYE 75
++ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 56 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRAEVNLYE 115
Query: 76 LKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPS 134
+ MS + L + N R GP+F + P++ G+D E + + ++D G V +
Sbjct: 116 SRRGEDMSIEALANLAGNFA---RGGPFFAIHPILGGVDEEGSH--VFSIDPAGGVME-D 169
Query: 135 DFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
D+ V G YG E +E +L D+ A+++ +A ER+ SG G + I +
Sbjct: 170 DYTVTGSGMQLAYGHLEQAYEDDLSNDEATTIAARSIKSAAERDTGSGNGVFLCEITGEG 229
Query: 195 VTVR 198
V +
Sbjct: 230 VDIH 233
>gi|344212556|ref|YP_004796876.1| proteasome subunit beta [Haloarcula hispanica ATCC 33960]
gi|343783911|gb|AEM57888.1| proteasome subunit beta [Haloarcula hispanica ATCC 33960]
Length = 230
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V ++ +N V IA D+R + G +++ QK+ Q+ + L G Q+ +
Sbjct: 35 GTTTVGISTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAMTLVGSVGGAQSFIRS 94
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMD 125
+R +LYE++ + +S L + N R GPYF + P+V G+D E + + ++D
Sbjct: 95 LRAEADLYEVRRDEPLSIHALATLAGNFA---RGGPYFAINPIVGGVDEEGSH--VYSVD 149
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
G V + D+ V G + G E ++P + + +A+ A ER+ SG G
Sbjct: 150 PAGGVLE-DDYTVTGSGTMVATGTIEGQYDPEMSLSEARNLAIRAVNAAAERDTGSGNGV 208
Query: 186 VVYIIEQDKVTV 197
V+ I + V +
Sbjct: 209 VLAEITDEGVEI 220
>gi|448323944|ref|ZP_21513387.1| proteasome endopeptidase complex subunit beta [Natronobacterium
gregoryi SP2]
gi|445619946|gb|ELY73457.1| proteasome endopeptidase complex subunit beta [Natronobacterium
gregoryi SP2]
Length = 231
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 17 KNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYE 75
++ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 45 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRAEVNLYE 104
Query: 76 LKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPS 134
+ MS + L + N R GP+F + P++ G+D E + + ++D G V +
Sbjct: 105 SRRGEDMSIEALANLAGNFA---RGGPFFAIHPILGGVDEEGSH--VFSIDPAGGVME-D 158
Query: 135 DFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
D+ V G YG E +E +L D+ A+++ +A ER+ SG G + I +
Sbjct: 159 DYTVTGSGMQLAYGHLEQAYEDDLSNDEATTIAARSIKSAAERDTGSGNGVFLCEITGEG 218
Query: 195 VTVR 198
V +
Sbjct: 219 VDIH 222
>gi|344306709|ref|XP_003422027.1| PREDICTED: hypothetical protein LOC100675710 [Loxodonta africana]
Length = 560
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 10 SIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRF 69
+++A+ G++ +A D R + + K +++ +G G D T+ + I
Sbjct: 358 TVLAIAGEDFSIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEA 417
Query: 70 RQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGC 129
R +Y+ N+ M+ + AM+S +LY RRF PY+V ++ GLD E + + + D +G
Sbjct: 418 RLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD-EEGKGAVYSFDPVGS 476
Query: 130 VNQPSDFVVGGPCSDQLYGMC---------ETLWEPNLEPDDLFETIAQALVNACERNAV 180
+ S F GG S L + + + L D + ++A ER+
Sbjct: 477 YQRDS-FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRALRLVRDVFISAAERDVY 535
Query: 181 SGWGAVVYIIEQDKVTVRHVKTRMD 205
+G + I+ Q+ V + R D
Sbjct: 536 TGDALRICIVTQEGVREETLPLRRD 560
>gi|289580197|ref|YP_003478663.1| 20S proteasome subunits A and B [Natrialba magadii ATCC 43099]
gi|448281436|ref|ZP_21472742.1| 20S proteasome subunits A and B [Natrialba magadii ATCC 43099]
gi|289529750|gb|ADD04101.1| 20S proteasome A and B subunits [Natrialba magadii ATCC 43099]
gi|445578858|gb|ELY33258.1| 20S proteasome subunits A and B [Natrialba magadii ATCC 43099]
Length = 250
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 9/190 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
G + V + G + V +A D R + G + + +K+ VG H + G + QT +
Sbjct: 12 TGTTTVGLVGADGVVLAADTRASLGGRFVTNRTARKVVPVGDHTALTFAGSVGEAQTFVR 71
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPY-FVEPMVVGLDPETAEPIIGNM 124
++R ++ YE +R S + + ++L R GPY +E ++ G PE A +G
Sbjct: 72 QLRAERSRYEHATDRTPSVETTATVAGDLL---RGGPYQHLELVLGGTFPEPAVYQVGPG 128
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWG 184
G ++ P + G YG E +EP+ D L A+ NA ER+ SG G
Sbjct: 129 G--GVMDTP--YAASGSGMQLAYGRLEDAYEPDHSVDTLRGLATTAIRNATERDTASGDG 184
Query: 185 AVVYIIEQDK 194
V + D+
Sbjct: 185 MTVATLTVDE 194
>gi|164657003|ref|XP_001729628.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
gi|159103521|gb|EDP42414.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
Length = 257
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 1 MSIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATD 59
S T NGGSI+A+ G + IA D R +G + ++ K+F++ + G A D
Sbjct: 7 FSPYTSNGGSIMAIHGDDYCVIAGDTRQS-EGYNIQTRYKPKVFRLTDKATLATNGFAAD 65
Query: 60 TQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEP 119
+ + +++ R +Y+ R M + M+S +LY +RF PY+V ++ G+D E
Sbjct: 66 AEALVARVKTRLEMYQHTHGRSMPLHAIARMLSTILYSKRFFPYYVYNILGGIDEEGRGA 125
Query: 120 I-----IGNMDLIGCVNQPSDFVVGGPCSD------QLYGMCET-LWEPNLEP-DDLFET 166
+ +G+ + I C + + P D L ET + EP P
Sbjct: 126 VYGYDPVGSYERIVCCASGAAQGLLQPFLDNQVMFKNLNSTAETKIPEPGHLPLQHALRI 185
Query: 167 IAQALVNACERNAVSGWGAVVYII 190
+ + +A ER+ G G V+++
Sbjct: 186 VMDSFTSATERHIEVGDGLEVFVV 209
>gi|389745045|gb|EIM86227.1| proteasome subunit [Stereum hirsutum FP-91666 SS1]
Length = 258
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTV 63
T NGG+I+A+ G + IA D R +G ++ + K FQ+ + + G A D
Sbjct: 24 TQNGGTILAIAGADFTVIASDTR-QTEGFSIQTRYAPKAFQLTDRAVLAVNGFAADGNMF 82
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
++++ R Y + M + + +I MLY RRF PY+V ++ G++ E + +
Sbjct: 83 VKQVKQRLEWYRHAHAKDMPLRAIARLIQTMLYGRRFFPYYVYNILGGIE-EDGTGAVYS 141
Query: 124 MDLIGCVNQPSDFVVGGPCS-------DQLYGMCET----LWEPNLEP-DDLFETIAQAL 171
D +G + + G S +Q+Y +T L P P D+ + + +
Sbjct: 142 FDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPAQGLSHPTHLPLPDVLDIVIDSF 201
Query: 172 VNACERNAVSGWGAVVYII 190
+A ER+ G G ++I+
Sbjct: 202 TSATERHIEVGDGLEMFIV 220
>gi|448671267|ref|ZP_21687206.1| proteasome subunit beta [Haloarcula amylolytica JCM 13557]
gi|445765870|gb|EMA17007.1| proteasome subunit beta [Haloarcula amylolytica JCM 13557]
Length = 230
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADN-FQKIFQVGSHMYVGLPGLATDTQTVYQK 66
G + V + +N V IA D+R + G +++ QK+ Q+ + L G Q+ +
Sbjct: 35 GTTTVGIATENGVVIATDRRASLGGRFVSNKQVQKVEQIHPTAAMTLVGSVGGAQSFIRS 94
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMD 125
+R +LYE++ + +S L + N R GPYF + P+V G+D E + + ++D
Sbjct: 95 LRAEADLYEVRRDEPLSIHALATLAGNFA---RGGPYFAINPIVGGVDEEGSH--VYSVD 149
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
G V + D+ V G + G E ++P + + + +A+ A ER+ SG G
Sbjct: 150 PAGGVLE-DDYTVTGSGTMVATGTIEGQYDPEMSLGEARDLAIRAVNAAAERDTGSGNGV 208
Query: 186 VVYIIEQDKVTV 197
V+ I + V +
Sbjct: 209 VLAEITGEGVEI 220
>gi|296242983|ref|YP_003650470.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095567|gb|ADG91518.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 206
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 4/187 (2%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T + + V + V +A DKR +KI ++ + + + GL D Q +
Sbjct: 4 TASKTTTVGLVAGEYVVLAADKRATAGPMVYHKRVRKIMEITPYAAMTISGLVADAQFLV 63
Query: 65 QKIRFRQNLYELKENRKMSPKVLLAMISNMLYER-RFGPYFVEPMVVGLDPETAEPIIGN 123
+ ++ YELK +++S L + IS +L RF P+ V+ ++ G+D E P +
Sbjct: 64 ENAKYIAKDYELKMGKRISIDALASRISLILSAYLRFSPFIVQLLLGGVDHEG--PKLYY 121
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGW 183
MDL G V++ F+ G S +G+ E + L ++ E +A+ +A R++ +G
Sbjct: 122 MDLYGSVSRER-FMSTGSGSPVAFGVLEQGYREGLTLEEAKELAFKAVSSAIMRDSFTGE 180
Query: 184 GAVVYII 190
G + +I
Sbjct: 181 GVDIVVI 187
>gi|429965201|gb|ELA47198.1| hypothetical protein VCUG_01298 [Vavraia culicis 'floridensis']
Length = 242
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
N G+++A ++ V IA D R + KIF+ ++ G G D VY +
Sbjct: 37 NSGTVLAFKQQDYVMIAADTRHSSVMGINSRKMTKIFEFDGFVFSG-TGFYADLNEVYFR 95
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGP-YFVEPMVVGLDPETAEPIIGNMD 125
+R+ YE + R++S + L + N+LY RR G Y+V +++G D ET +P++ + D
Sbjct: 96 LRYEVEKYENEIERRISIRALAHKLLNILYSRRRGLIYYVFCVLIGKD-ETGDPVLYSFD 154
Query: 126 LIGCVNQPSDFVVGG------PCSDQ--LYGMCETLWEPNLEPDDLFETIAQALVNACER 177
IG Q G P D + E + +L ++ E +A A ER
Sbjct: 155 PIGSYEQTMCRCYGSASPMIQPLLDSTIMKHNQENVSYQSLSVEESVELTKKAFFAAAER 214
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G + + ++D +T V R D
Sbjct: 215 DVNTGDYLQIVVYKKDGMTEELVDLRKD 242
>gi|448301508|ref|ZP_21491501.1| proteasome endopeptidase complex subunit beta [Natronorubrum
tibetense GA33]
gi|445584244|gb|ELY38568.1| proteasome endopeptidase complex subunit beta [Natronorubrum
tibetense GA33]
Length = 243
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISSLRAEVNLYEA 117
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ MS L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 118 RRGEDMSIDALATLAGNFA---RGGPFFAIHPILGGVDDEGSH--VYSIDPAGGVMK-DD 171
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG E +E L D+ A+++ +A ER+ SG G + I + V
Sbjct: 172 YTVTGSGMQLAYGHLEQAYEDGLSNDEAKTIAARSIKSAAERDTGSGNGVFLCEITDEGV 231
Query: 196 TVR 198
+
Sbjct: 232 DIH 234
>gi|448105494|ref|XP_004200509.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|448108619|ref|XP_004201140.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359381931|emb|CCE80768.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359382696|emb|CCE80003.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
Length = 241
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+++ + G++ +A D R + G ++ ++ ++F VG ++ + G + D +
Sbjct: 27 NGGTVLGIAGEDFAVLAGDTR-QVVGYSINSRYEPRVFDVGDNILMTANGFSADGNALIN 85
Query: 66 KIRFRQNLYELKEN-RKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNM 124
K + Y+ +K+S K I ++LY +RF P++V ++ GL+ E + ++ +
Sbjct: 86 KFKNSLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPFYVSTLIAGLNDE-GKGVVYSY 144
Query: 125 DLIGCVNQPSDFVVGGPCSDQLYGMCE------TLWEPN-----------LEPDDLFETI 167
D +G + GG + + + +EP L D++ + +
Sbjct: 145 DPVGSY-EVEQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGEKKKELRYLSLDEVVQLV 203
Query: 168 AQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A + ER+ G G +YI+ +D V V + + D
Sbjct: 204 RDAFTSVTERHIYVGDGLEIYIVNKDGVKVEYYPLKRD 241
>gi|448733676|ref|ZP_21715918.1| proteasome beta subunit [Halococcus salifodinae DSM 8989]
gi|445802196|gb|EMA52503.1| proteasome beta subunit [Halococcus salifodinae DSM 8989]
Length = 237
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 7/181 (3%)
Query: 20 VAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKEN 79
V +A D+R + +KI ++ + + G + Q + ++ +LYE +
Sbjct: 55 VVLATDRRASAGNMVASKQAEKIAEIHPRGALTISGAVSAAQALISNLKAEVDLYEARRG 114
Query: 80 RKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVV 138
+MS + L + N L R G +F V+P++ G+D E + I +D+ G V + D+ V
Sbjct: 115 EEMSMQALSTLTGNFL---RSGAFFIVQPVLGGVDDEGSH--IYRIDIGGSVME-EDYAV 168
Query: 139 GGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVR 198
G S G+ E ++ L D+ A+A+ +A ER+ SG G + + ++ VT+
Sbjct: 169 SGSGSPFALGVLEQEYDDGLSMDEAETVAARAVKSAVERDTASGNGITLSEVTEEGVTIE 228
Query: 199 H 199
+
Sbjct: 229 N 229
>gi|412993855|emb|CCO14366.1| predicted protein [Bathycoccus prasinos]
Length = 243
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 13/211 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+++A+ G++ V A D R + + + K+ ++ + G D T+ +
Sbjct: 34 NGGTVMAVAGEDYVICAADTRMSTGYSIMTRQYTKVDEMSPKTLMASAGFMADAATLKKL 93
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
++ R + Y+ N+ + M+SN LY RRF PY+ +V GLD E + + D
Sbjct: 94 LKGRCDQYQFANNKPIGCVAFAQMLSNTLYMRRFFPYYAFNIVAGLDAE-GKGAVFTYDA 152
Query: 127 IGCVNQPSDFVVGG------PCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNA 174
+G + + G P D L P L ++ + I A
Sbjct: 153 VGSYERTNYSCQGSGQQLIMPVLDNQLKTVSPLVLPAVSSATPLSEEEAIDLIKDCFATA 212
Query: 175 CERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G ++++ +D + + + D
Sbjct: 213 GERDIYTGDAVELFVMNKDGIRKETMPLKTD 243
>gi|424814263|ref|ZP_18239441.1| 20S proteasome, beta subunit [Candidatus Nanosalina sp. J07AB43]
gi|339757879|gb|EGQ43136.1| 20S proteasome, beta subunit [Candidatus Nanosalina sp. J07AB43]
Length = 216
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 92/178 (51%), Gaps = 5/178 (2%)
Query: 22 IACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKENR 80
+A DKR + G +++ QKI+++ + + + G D Q V + +R + N+ +L E R
Sbjct: 31 LAADKRAALGGRLVSNKHAQKIYELDDEIGLTIAGSVGDAQKVVRMMRSQLNMKKL-ETR 89
Query: 81 KMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGG 140
++S K +++N+L+ + P+ + ++ G+ + E I+ ++D G + D+ G
Sbjct: 90 ELSVKGAGTLLANILHANKMMPFMNQFVLGGI--QEGEGILYSLDPAGGLMPHEDYTATG 147
Query: 141 PCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVY-IIEQDKVTV 197
S +G+ E +E + ++ E A+ +A ER+ SG G +V I E+D V
Sbjct: 148 SGSQMAFGVLEDGFEHGISHEEGKELAMNAVKSAMERDTASGNGIMVAEITEEDGYNV 205
>gi|365990732|ref|XP_003672195.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
gi|343770970|emb|CCD26952.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
Length = 241
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 20/219 (9%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T NGG+I+ + G++ +A D R + + K+F G ++ + G A D + +
Sbjct: 25 TDNGGTILGIAGEDFAILAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADGEALV 84
Query: 65 QKIRFRQNLYELKEN-RKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
++ + Y N +K+S K I ++LY +RF PY+V ++ GLD E + + +
Sbjct: 85 KRFKNSLKWYHFDHNDKKLSMKSAARNIQHLLYGKRFFPYYVHTIIAGLD-ENGKGAVYS 143
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCE------TLWEPN-----------LEPDDLFET 166
D +G + GG + + + +EP L D++ +
Sbjct: 144 FDPVGSYEREQ-CRAGGAAASLIMPFLDNQVNFKNQFEPGTDGKVKKPLKYLSIDEVIKL 202
Query: 167 IAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ + +A ER+ G G + I+ +D V + + D
Sbjct: 203 VRDSFTSATERHIHVGDGLEILIVTKDGVRKEFYELKRD 241
>gi|359473811|ref|XP_002264176.2| PREDICTED: proteasome subunit beta type-1-like [Vitis vinifera]
Length = 149
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S+ NGGS VA+ G + I R I L ++ KI ++ + G D +
Sbjct: 9 SLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKICKLADKCVMASSGFQADVR 68
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
+ + + RQ +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E
Sbjct: 69 ALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
gi|121697221|sp|Q46G14.1|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosarcina barkeri
str. Fusaro]
Length = 211
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + + + +A ++R + + +K++Q+ + + G D Q + + +
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGNFIASKTAKKVYQIDDLVAMTTAGSVGDAQQLVRLV 68
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
LY+++ N M+ K + ++SN L R+ P V+ ++ G+D P I ++D +
Sbjct: 69 NVESQLYKMRRNESMTIKGIATLMSNFLNSNRYYPMMVQLLIGGVDKNG--PGIYSLDAL 126
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + G S YG+ E + ++ + + +A+ NA +R++ SG V
Sbjct: 127 GGSIEETRISATGSGSPMAYGVLEDQYREDMTVKEGLDLAIRAIHNATKRDSASGENIDV 186
Query: 188 YIIEQD 193
+I ++
Sbjct: 187 VVITKE 192
>gi|358373086|dbj|GAA89686.1| proteasome component Pre3 [Aspergillus kawachii IFO 4308]
Length = 232
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQK 66
G SI+A+ K+ V + D R G +A+ K+ QV ++ G A DTQ V
Sbjct: 30 GTSIMAINFKDGVILGADSRT-TTGAYIANRVTDKLTQVHDTIWCCRSGSAADTQAVADI 88
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + N+Y + N S +V ++ + YE + ++ G DP+ + ++ L
Sbjct: 89 VSYHLNMYAITNNEAPSTQVAASLFQELCYENK-DMLSAGIIIAGYDPKHGGQVY-SIPL 146
Query: 127 IGCVN-QPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
G ++ QP + +GG S +YG C+T W N+ ++ + AL A + + SG G
Sbjct: 147 GGSLHKQP--YSIGGSGSTYIYGYCDTHWRENMTEEEGINFVRGALQEAIKWDGSSG-GV 203
Query: 186 VVYIIEQDKVTVRHV 200
+ ++ + RH+
Sbjct: 204 IRLVVLTSRGAQRHL 218
>gi|392866253|gb|EAS28865.2| proteasome component C5 [Coccidioides immitis RS]
Length = 260
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGS-------HMYVGLPGL 56
T NGGS + +TG + +A D R + G + F KIF++G+ H+ + + G
Sbjct: 35 TDNGGSTLGITGPDFAILAGDTR-SVSGYNINTRFAPKIFKIGADETGEGGHIILSVVGF 93
Query: 57 ATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPET 116
+ D Q + +++ +YE ++MS K +S +LY +RF PY+V ++ GLD E
Sbjct: 94 SADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILGGLD-ED 152
Query: 117 AEPIIGNMDLIGCVNQPSDFVVGGPCS-------------DQLYGMCETLWE-PNLEPDD 162
+ + + D +G + G S +Q E E + P+
Sbjct: 153 GKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEHGGELVQVTPEP 212
Query: 163 L-----FETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
L E + A +A ER+ G G II D +
Sbjct: 213 LSRATALELVRDAFTSAVERHIEVGDGLQTMIITADGI 250
>gi|119185113|ref|XP_001243373.1| hypothetical protein CIMG_07269 [Coccidioides immitis RS]
Length = 259
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGS-------HMYVGLPGL 56
T NGGS + +TG + +A D R + G + F KIF++G+ H+ + + G
Sbjct: 34 TDNGGSTLGITGPDFAILAGDTR-SVSGYNINTRFAPKIFKIGADETGEGGHIILSVVGF 92
Query: 57 ATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPET 116
+ D Q + +++ +YE ++MS K +S +LY +RF PY+V ++ GLD E
Sbjct: 93 SADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILGGLD-ED 151
Query: 117 AEPIIGNMDLIGCVNQPSDFVVGGPCS-------------DQLYGMCETLWE-PNLEPDD 162
+ + + D +G + G S +Q E E + P+
Sbjct: 152 GKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEHGGELVQVTPEP 211
Query: 163 L-----FETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
L E + A +A ER+ G G II D +
Sbjct: 212 LSRATALELVRDAFTSAVERHIEVGDGLQTMIITADGI 249
>gi|261201302|ref|XP_002627051.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239592110|gb|EEQ74691.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239611727|gb|EEQ88714.1| proteasome component C5 [Ajellomyces dermatitidis ER-3]
gi|327348257|gb|EGE77114.1| proteasome component C5 [Ajellomyces dermatitidis ATCC 18188]
Length = 266
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 38/234 (16%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVG--------SHMYVGLPG 55
T NGGS + + GK+ +A D R + G + + K+F++G +H+ + + G
Sbjct: 38 TDNGGSTLGIAGKDYAILAGDTR-SVSGYNINTRYAPKLFKIGEDNEGGEGAHLVLSVVG 96
Query: 56 LATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
A D + + +++ +Y+ + + MS K ++ +LY +RF PY+V ++ G+D E
Sbjct: 97 FAADGRALKERLDAIVKMYKYRHGKPMSVKACAQRLATILYSKRFFPYYVHAILAGID-E 155
Query: 116 TAEPIIGNMDLIGC-----------------------VNQPSDFVVGGPCSDQLYGMCET 152
+ + + D +G VN + F+ P S + M +
Sbjct: 156 EGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQFI---PGSGEGNAMDKQ 212
Query: 153 LWEPNLEPDDL-FETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
EP P D+ + + A +A ER+ G G V +I + + H + D
Sbjct: 213 PREPVPPPRDVALQLVKDAFTSAVERHIEVGDGLQVMVITTEGIQEVHHPLKKD 266
>gi|296088721|emb|CBI38171.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 2 SIMTYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQ 61
S+ NGGS VA+ G + I R I L ++ KI ++ + G D +
Sbjct: 97 SLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKICKLADKCVMASSGFQADVR 156
Query: 62 TVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
+ + + RQ +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E
Sbjct: 157 ALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNE 210
>gi|384485678|gb|EIE77858.1| hypothetical protein RO3G_02562 [Rhizopus delemar RA 99-880]
Length = 232
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ---KIFQVGSHMYVGLPGLATDTQTV 63
NGG+ VA+ GK+ +A D R Q T N + K +++ + + G D T+
Sbjct: 26 NGGTSVAIAGKDFCIVAADTR---QSTGYNINSRFAPKAYKLSETSVIAMNGFHADGLTL 82
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI--- 120
+ + R Y+ ++ MS L M+S LY++RF PY+ ++ G+D E +
Sbjct: 83 KKVLDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYSFCVLGGVDEEGKGAVYCY 142
Query: 121 --IGNMDLIGCVNQPSDFVVGGPCSDQLYGM--CETLWEPNLEPDDLFETIAQALVNACE 176
IG+ + C S + P D + + ++E D+ + + A +A E
Sbjct: 143 DAIGSYEREKCRASGSAAALIQPFLDNQVSKKNMQNVSTEDIELDEAIKIVKDAFTSATE 202
Query: 177 RNAVSGWGAVVYIIEQDK 194
R+ +G ++II +D+
Sbjct: 203 RDIYTGDNLQIFIIRKDQ 220
>gi|440491899|gb|ELQ74504.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
[Trachipleistophora hominis]
Length = 243
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
N G+++A ++ V IA D R + + KIF+ ++ G G D VY +
Sbjct: 38 NSGTVLAFKQQDYVIIAADTRHSSEMGINSRKMTKIFEFDGFIFSG-TGFYADLNEVYFR 96
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGP-YFVEPMVVGLDPETAEPIIGNMD 125
+R+ YE + +++ L + N+LY RR G Y+V ++VG D ET EP++ + D
Sbjct: 97 LRYEVERYENEVEKRIGISALAHKLLNILYSRRGGLIYYVFSVLVGKD-ETGEPVLYSFD 155
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEP-----------------DDLFETIA 168
IG Q V C YG + +P L+ ++ E
Sbjct: 156 PIGSYEQ-----VMCKC----YGSASPMIQPLLDSTIMKYNQENASYQSLCMEESVELTK 206
Query: 169 QALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+A A ER+ +G + + ++D V V R D
Sbjct: 207 KAFFAAAERDVNTGDYLQIVVYKRDGVNEELVDLRKD 243
>gi|317034265|ref|XP_001396260.2| proteasome component PRE3 [Aspergillus niger CBS 513.88]
Length = 232
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQK 66
G SI+A+ K+ V + D R G +A+ K+ QV ++ G A DTQ V
Sbjct: 30 GTSIMAINFKDGVILGADSRT-TTGAYIANRVTDKLTQVHDTIWCCRSGSAADTQAVADI 88
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + N+Y + N S +V ++ + YE + ++ G DP+ + ++ L
Sbjct: 89 VSYHLNMYSITNNEAPSTQVAASLFQELCYENK-DMLSAGIIIAGYDPKHGGQVY-SIPL 146
Query: 127 IGCVN-QPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
G ++ QP F +GG S +YG C+ W N+ ++ + AL A + + SG G
Sbjct: 147 GGSLHKQP--FSIGGSGSTYIYGYCDAHWRENMTEEEGINFVRGALQEAIKWDGSSG-GV 203
Query: 186 VVYIIEQDKVTVRHV 200
+ ++ + RH+
Sbjct: 204 IRLVVLTSRGAQRHL 218
>gi|70987129|ref|XP_749045.1| proteasome component Pre3 [Aspergillus fumigatus Af293]
gi|66846675|gb|EAL87007.1| proteasome component Pre3, putative [Aspergillus fumigatus Af293]
gi|159123184|gb|EDP48304.1| proteasome component Pre3, putative [Aspergillus fumigatus A1163]
Length = 221
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQK 66
G SI+A+ K+ V + D R G +A+ K+ QV ++ G A DTQ V
Sbjct: 17 GTSIMAINFKDGVILGADSRT-TTGAYIANRVTDKLTQVHDTIWCCRSGSAADTQAVADI 75
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + N+Y + N S +V A+ + YE + ++ G DP + ++ L
Sbjct: 76 VSYHLNMYGIVNNEPPSTQVAAALFQELCYENK-DMLSAGIIIAGYDPRHGGQVY-SIPL 133
Query: 127 IGCVN-QPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
G ++ QP + +GG S +YG C+ W+ N+ ++ + + AL A + + SG G
Sbjct: 134 GGSLHKQP--YAIGGSGSTYIYGYCDAHWKENMTEEEGIKFVRDALQEAIKWDGSSG-GV 190
Query: 186 VVYIIEQDKVTVRHV 200
+ ++ + + RH+
Sbjct: 191 IRLVVLTSRGSERHL 205
>gi|303313738|ref|XP_003066878.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106545|gb|EER24733.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320032575|gb|EFW14527.1| proteasome component C5 [Coccidioides posadasii str. Silveira]
Length = 259
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGS-------HMYVGLPGL 56
T NGGS + +TG + +A D R + G + F KIF++G+ H+ + + G
Sbjct: 34 TDNGGSTLGITGPDFAILAGDTR-SVSGYNINTRFAPKIFKIGADETGEGGHIILSVVGF 92
Query: 57 ATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
+ D Q + +++ +YE ++MS K +S +LY +RF PY+V ++ GLD +
Sbjct: 93 SADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILGGLDED 151
>gi|429962010|gb|ELA41554.1| hypothetical protein VICG_01418 [Vittaforma corneae ATCC 50505]
Length = 275
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ + +T N + IA D R T + KIF++G Y+ G D+ VY
Sbjct: 76 NGGTSLVVTTDNKIIIASDTRHSSDYTINSRKMTKIFKIG-EFYLATTGFFADSFEVYTN 134
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETA-----EPII 121
+ ++ YE +++ K L ++ N+LY +RF PY+ ++ G D TA +P +
Sbjct: 135 LMYQVKQYETYS--RITLKALAHLLHNLLYSKRFFPYYSYAILCGFDNGTATVYSYDP-V 191
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQ--LYGMCETLWEPNLEPDDLFETIAQALVNACERNA 179
G+ D C S V+ P D + + EP+ + E + +A A ER+
Sbjct: 192 GSYDKTRCRCNGSSSVMIQPLLDSWIMGKNFKDFKEPSFS--ETLELVKKAFDAASERDV 249
Query: 180 VSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +Y+IE+D ++ + R D
Sbjct: 250 KTKDYLEIYVIEKDSMSHELIPLRKD 275
>gi|315231929|ref|YP_004072365.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315184957|gb|ADT85142.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 181
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 27 RFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKENRKMSPKV 86
R I ++ N KIFQ+ H+ + G D ++ + +R LY + R+MS K
Sbjct: 2 RATIGNMVMSKNVTKIFQIDEHLALAGAGNVGDILSLVRMLRAETKLYRARVGREMSVKA 61
Query: 87 LLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQL 146
L + +N+L ++ PYF ++ G D +P + ++D+ G + + +V G +
Sbjct: 62 LATLTANILNGTKYFPYFGWFLIGGYDE---KPNLYSVDMAGGMTEDK-YVSAGSGMEFA 117
Query: 147 YGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
Y + E ++ ++ D+ + +A+ A +R+ +G G +V I ++
Sbjct: 118 YAVLENEYKEDMSVDEGVKLAVKAINTAIKRDVFTGDGILVVKITKE 164
>gi|409078890|gb|EKM79252.1| hypothetical protein AGABI1DRAFT_113835 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 256
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTV 63
T NGG+I+A+ G + IA D R +G ++ + K+F++ + + G A D
Sbjct: 21 TENGGTILAIAGADFSVIAGDTRQS-EGYSIQTRYAPKVFRLTDKAVLAVNGFAADGNMF 79
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+K+R R Y + M + + +I MLY RRF PY+V ++ G++ E + +
Sbjct: 80 VKKVRQRLEWYRHAHAKDMPIRAIARLIQTMLYSRRFFPYYVYNILGGIE-EDGTGAVYS 138
Query: 124 MDLIGCVNQPSDFVVGGPCS-------DQLYGMCE-----TLWEPNLEPDDLFETIAQAL 171
D +G + + G S +Q+Y + T + +L + + +
Sbjct: 139 FDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPAPGTSFPGHLSLSTVLSLVIDSF 198
Query: 172 VNACERNAVSGWGAVVYII 190
+A ER+ G G +YI+
Sbjct: 199 TSATERHIEVGDGLEMYIV 217
>gi|289582997|ref|YP_003481463.1| proteasome endopeptidase complex subunit beta [Natrialba magadii
ATCC 43099]
gi|448283541|ref|ZP_21474815.1| proteasome endopeptidase complex subunit beta [Natrialba magadii
ATCC 43099]
gi|302595777|sp|D3SSQ6.1|PSB_NATMM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|289532550|gb|ADD06901.1| proteasome endopeptidase complex, beta subunit [Natrialba magadii
ATCC 43099]
gi|445573860|gb|ELY28374.1| proteasome endopeptidase complex subunit beta [Natrialba magadii
ATCC 43099]
Length = 243
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 17 KNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYE 75
++ V IA D R + G +++ N QK+ Q+ + + G Q+ +R NLYE
Sbjct: 57 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTMVGSVGGAQSFIGSLRAEVNLYE 116
Query: 76 LKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPS 134
+ +S L + N R GP+F + P++ G+D E + + ++D G V +
Sbjct: 117 ARRGEPISMDALATLAGNFA---RGGPFFAIHPILGGVDEEGSH--VYSIDPAGGVME-D 170
Query: 135 DFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
D+ V G YG+ E +E +L D+ A+A+ +A ER+ SG G + I +
Sbjct: 171 DYTVTGSGMQLAYGLLEQEFEEDLSNDEATTVAARAIKSAAERDTGSGNGVFLCEITDEG 230
Query: 195 VTVR 198
V +
Sbjct: 231 VDIH 234
>gi|14594933|emb|CAC43327.1| putative beta6 proteasome subunit [Nicotiana tabacum]
Length = 192
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + IA D R L ++ KI ++ + G D + + +
Sbjct: 6 NGGTCVAVAGADYCVIAADTRMSSGYNILTRDYSKIIKLADKCVLASSGFQADVKALQKV 65
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI-----I 121
+ R +Y+ + N++MS + ++SN LY +RF PY+ ++ GLD E + +
Sbjct: 66 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYDAV 125
Query: 122 GNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPN------LEPDDLFETIAQALVNAC 175
G+ +G +Q S + P D L P L + + + V+A
Sbjct: 126 GSYGRVGYSSQGSGSTLIMPFLDYQLKSPSPLLLPAKDAVTPLSESEAIDLVKTCFVSAT 185
Query: 176 ERNAVSG 182
ER+ +G
Sbjct: 186 ERDIYTG 192
>gi|426195798|gb|EKV45727.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 256
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTV 63
T NGG+I+A+ G + IA D R +G ++ + K+F++ + + G A D
Sbjct: 21 TENGGTILAIAGADFSVIAGDTRQS-EGYSIQTRYAPKVFRLTDKAVLAVNGFAADGNMF 79
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+K+R R Y + M + + +I MLY RRF PY+V ++ G++ E + +
Sbjct: 80 VKKVRQRLEWYRHAHAKDMPIRAIARLIQTMLYSRRFFPYYVYNILGGIE-EDGTGAVYS 138
Query: 124 MDLIGCVNQPSDFVVGGPCS-------DQLYGMCE-----TLWEPNLEPDDLFETIAQAL 171
D +G + + G S +Q+Y + T + +L + + +
Sbjct: 139 FDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPAPGTSFPGHLSLSTVLSLVIDSF 198
Query: 172 VNACERNAVSGWGAVVYII 190
+A ER+ G G +YI+
Sbjct: 199 TSATERHIEVGDGLEMYIV 217
>gi|448395976|ref|ZP_21569070.1| proteasome endopeptidase complex subunit beta [Haloterrigena salina
JCM 13891]
gi|445660557|gb|ELZ13353.1| proteasome endopeptidase complex subunit beta [Haloterrigena salina
JCM 13891]
Length = 227
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 42 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISSLRAEVNLYES 101
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ +MS L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 102 RRGEQMSIDALATLAGNFA---RGGPFFAIHPILGGVDEEGSH--VYSIDPAGGVME-DD 155
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG E +E ++ ++ A + +A ER+ SG G + I + V
Sbjct: 156 YTVTGSGMQLAYGHLEQAYEEDMSNEEAVSVAAHGIKSAVERDTGSGNGVFLCEITDEGV 215
Query: 196 TVR 198
+
Sbjct: 216 DIH 218
>gi|295672922|ref|XP_002797007.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282379|gb|EEH37945.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 266
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVG--------SHMYVGLPG 55
T NGGS + + G++ +A D R + G ++ + K+F++G +H+ + + G
Sbjct: 38 TDNGGSTLGIAGEDYAILAGDTR-SVTGYSINTRYSPKLFKIGEDDEGGEGAHLVLSVVG 96
Query: 56 LATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
A D + + +++ +Y+ K + MS K +S +LY +RF PY+V ++ G+D E
Sbjct: 97 FAADGRALKERLDAVVKMYKYKHGKPMSVKACAQRLSTILYSKRFFPYYVHAILGGID-E 155
Query: 116 TAEPIIGNMDLIGC-----------------------VNQPSDFVVGGPCSDQLYGMCET 152
+ + + D +G VN + +V G + + + +
Sbjct: 156 DGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYVAG---TGEGNALDKQ 212
Query: 153 LWEPNLEP-DDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
EP +P +D + + A +A ER+ G G + +I +D +
Sbjct: 213 PREPQPQPAEDALQLVNDAFTSAVERHIEVGDGLQIMLITKDGI 256
>gi|17380265|sp|Q9P992.1|PSB_METTE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|790625|gb|AAA91642.1| beta-type proteasome subunit [Methanosarcina thermophila TM-1]
Length = 210
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + + + +A ++R + + +K++Q+ + + G D Q + + +
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
LY+++ + M+ K + ++SN L R+ P V+ ++ G+D P I ++D +
Sbjct: 69 SVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNG--PGIYSLDAM 126
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + G S YG+ E + N+ + + +A+ NA +R++ SG V
Sbjct: 127 GGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENIDV 186
Query: 188 YIIEQD---KVTVRHVKTR 203
+I ++ ++ VK+R
Sbjct: 187 VVITKEAFKRLDPEEVKSR 205
>gi|384497220|gb|EIE87711.1| hypothetical protein RO3G_12422 [Rhizopus delemar RA 99-880]
Length = 232
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGG+ VA+ GK+ +A D R G + F K +++ + + G D T+ +
Sbjct: 26 NGGTSVAIAGKDFCIVAADTRQST-GYNINSRFSPKAYKLSETSVIAMNGFHADGLTLKK 84
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPI----- 120
+ R Y+ ++ MS L M+S LY++RF PY+ ++ G+D E +
Sbjct: 85 VLDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYSFCVLGGVDEEGKGAVYCYDA 144
Query: 121 IGNMDLIGCVNQPSDFVVGGPCSDQLYGM--CETLWEPNLEPDDLFETIAQALVNACERN 178
IG+ + C S + P D + + ++E D+ + + A +A ER+
Sbjct: 145 IGSYEREKCRASGSAAALIQPFLDNQVSKKNMQNVSLEDIELDEAIKVVKDAFTSATERD 204
Query: 179 AVSGWGAVVYIIEQDK 194
+G ++II +D+
Sbjct: 205 IYTGDNLQIFIIRKDQ 220
>gi|223993685|ref|XP_002286526.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977841|gb|EED96167.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 280
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 10/208 (4%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+ +A++G + +A D R L+ N K+ + +G G TD +
Sbjct: 75 FNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTEKCVLGSAGCKTDVDQLRS 134
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ + +Y + M+ + M+ N LY +RF PY+ ++ G+D E + + + D
Sbjct: 135 VLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSE-GKGAVYSYD 193
Query: 126 LIGCVNQPSDFVVGG-------PCSDQLYGMCETL-WEPNLEPDDLFETIAQALVNACER 177
IG + + F G P D + L + L +++ E + A + A ER
Sbjct: 194 AIGSFER-TPFSASGSGQAFLIPLMDNVISHKNRLDQKRELGSEEVVEIVKDAFLTAGER 252
Query: 178 NAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ +G + +I + K + D
Sbjct: 253 DIYTGDAVEIMVITAKGIESETFKLKAD 280
>gi|325184015|emb|CCA18472.1| proteasome subunit beta putative [Albugo laibachii Nc14]
Length = 247
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 8/207 (3%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+NGG+ +A+ G + V IA D R + L+ N +K+ Q+ S + PG D +
Sbjct: 42 FNGGTALAIAGPDYVVIAGDSRLSTGYSILSRNEKKLQQLTSTSVLASPGSHNDVIQLRG 101
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
++ + +Y +S + L ++ N LY RRF PY+ ++ G+D + + + + D
Sbjct: 102 MLQLQIQMYMHDNQAIISTENLSQVLMNTLYSRRFFPYYAFCVLAGIDKD-GKGAVYSYD 160
Query: 126 LIGCVNQPSDFVVGG------PCSDQLY-GMCETLWEPNLEPDDLFETIAQALVNACERN 178
IG ++ S VG P D L T + + E I A + A ER+
Sbjct: 161 AIGSYDRVSRGAVGSGGHLMIPLLDNLVEHYSRTDPKREFTQQETKEIIKDAFITAGERD 220
Query: 179 AVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+G + I + H + + D
Sbjct: 221 IYTGDCVEIMTITASGIEKEHFELKKD 247
>gi|284164848|ref|YP_003403127.1| proteasome endopeptidase complex subunit beta [Haloterrigena
turkmenica DSM 5511]
gi|302595690|sp|D2RQX3.1|PSB1_HALTV RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|284014503|gb|ADB60454.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
turkmenica DSM 5511]
Length = 243
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISSLRAEVNLYES 117
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ +MS L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 118 RRGEQMSIDALATLAGNFA---RGGPFFAIHPILGGVDEEGSH--VYSIDPAGGVME-DD 171
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG E +E ++ ++ A + +A ER+ SG G + I + V
Sbjct: 172 YTVTGSGMQLAYGHLEQAYEEDMSNEEAVSVAAHGIKSAVERDTGSGNGVFLCEITDEGV 231
Query: 196 TVR 198
+
Sbjct: 232 DIH 234
>gi|402466187|gb|EJW01728.1| hypothetical protein EDEG_03753 [Edhazardia aedis USNM 41457]
Length = 225
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+N G+ +A+ + + +A D R + N KI+ + +Y+ + G D VY
Sbjct: 19 FNAGTSLAINMNDYLILATDTRHSSEMGINTRNISKIYFLDD-LYLIVTGFYADGYEVYI 77
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ ++ YE K N+KM + ++ N+LY +RF PY+ ++ G D ++ + ++ + D
Sbjct: 78 NLLYQLIEYESKNNKKMGIRSAAHLLHNLLYRKRFFPYYSYCILGGFDKKSQKFLLFSFD 137
Query: 126 LIGCVNQPSDFVVGG------PCSDQLYGMCETLWEPN----LEPDDLFETIAQALVNAC 175
++G + V G P D + + WE N + ++ E + A +A
Sbjct: 138 VVGSYGETVCRVDGSGTTMIQPLLDS--RISKLNWENNDTKVTDCKEVCELVKIAFKSAA 195
Query: 176 ERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
ER+ +G + ++++D + K R D
Sbjct: 196 ERDVKTGDYLDLVVVKKDGIERTLHKLRHD 225
>gi|68065946|ref|XP_674957.1| proteasome subunit beta type 1 [Plasmodium berghei strain ANKA]
gi|56493858|emb|CAI00630.1| proteasome subunit beta type 1, putative [Plasmodium berghei]
Length = 267
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 33/218 (15%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ- 65
NGG+++ +TG N V +A D R + + N KI ++ +G G+ +D +T++
Sbjct: 38 NGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSL 97
Query: 66 -----KIRFRQN-------------------LYELKENRKMSPKVLLAMISNMLYERRFG 101
KI N L+ L+ + S V+ ++ LY RRF
Sbjct: 98 LQVLLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFF 157
Query: 102 PYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCS-------DQLYGMCETLW 154
PY+ ++ G+D E + ++ + D IG Q + G S +++ + +
Sbjct: 158 PYYTFNILAGID-ENGKGVLYSYDAIGSYYQSTHACTGSGSSLILPILDNRVEQKNQLIK 216
Query: 155 EPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQ 192
+ D + A+ +A ER+ +G A +YII+
Sbjct: 217 NMDFNLRDDINFVKDAMTSATERDIYTGDKAEIYIIDN 254
>gi|414886157|tpg|DAA62171.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 228
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+ VA+ G + +A D R + + L + KI + + G D + +++
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALHKN 71
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFV 105
+ R+ LY+ + N++MS + ++SN LY +RF PY+
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYA 110
>gi|448706042|ref|ZP_21700886.1| proteasome endopeptidase complex subunit beta [Halobiforma
nitratireducens JCM 10879]
gi|445794984|gb|EMA45521.1| proteasome endopeptidase complex subunit beta [Halobiforma
nitratireducens JCM 10879]
Length = 242
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 17 KNCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYE 75
++ V IA D R + G +++ N QK+ Q+ + L G Q+ +R NLYE
Sbjct: 56 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRAEVNLYE 115
Query: 76 LKENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPS 134
+ MS + L + N R GP+F + P++ G+D + + + ++D G V +
Sbjct: 116 SRRGEDMSIEALANLAGNFA---RGGPFFAIHPILGGVDEDGSH--VYSIDPAGGVME-D 169
Query: 135 DFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDK 194
D+ V G YG E +E +L D+ A+++ +A ER+ SG G + I +
Sbjct: 170 DYTVTGSGMQLAYGHLEQSYEDDLTNDEATTIAARSIKSAAERDTGSGNGVFLCEITDEG 229
Query: 195 VTVR 198
V +
Sbjct: 230 VDIH 233
>gi|410075834|ref|XP_003955499.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
gi|372462082|emb|CCF56364.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
Length = 241
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQK 66
NGG+I+ + G++ +A D R + + K+F G ++ + G A D + + ++
Sbjct: 27 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKR 86
Query: 67 IRFRQNLYELKEN-RKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+ Y N +K+S K I ++LY +RF PY+V ++ GLD E + + + D
Sbjct: 87 FKNSIKWYHFDHNDKKLSIKSAARNIQHLLYGKRFFPYYVHTIIAGLD-EEGKGAVYSFD 145
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCE------TLWEPN-----------LEPDDLFETIA 168
+G + GG + + + +EP L D++ +
Sbjct: 146 PVGSYEREQ-CRAGGAAASLIMPFLDNQVNFKNQYEPGSDGKVKRPLKYLNIDEVISLVR 204
Query: 169 QALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
A +A ER+ G G + I+ ++ V + + D
Sbjct: 205 DAFTSATERHIHVGDGLEILIVTKEGVRKEYYDLKRD 241
>gi|329766105|ref|ZP_08257664.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137376|gb|EGG41653.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 167
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 41 KIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRF 100
KI ++ H + L G D Q + +R+ NL+ +++ +S L + S + ++ R
Sbjct: 2 KIQKIDEHAGLTLAGGVADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRG 61
Query: 101 GPYFVEPMVVGLDPETAEPIIGNMDLIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEP 160
P+ + +V G D P + N+D+ G V + S +V G S YG+ E + P+L
Sbjct: 62 YPFMADILVGGYDANG--PALFNIDMFGSVEKKS-YVTTGSGSPVAYGLLEEEYRPDLTV 118
Query: 161 DDLFETIAQALVNACERNAVSGWGAVVYIIEQD 193
++ + +A+ A RN +G G + ++++D
Sbjct: 119 EEAKKVALRAVKAAIVRNIGTGDGINIAVMDKD 151
>gi|392592203|gb|EIW81530.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 257
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTV 63
T NGG+I+A+ G + IA D R +G + + K+F++ + + G A D
Sbjct: 23 TENGGTILAIAGADFSVIAGDTRQS-EGYNIQTRYAPKVFRLTDRAVLAVNGFAADGNMF 81
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+K++ R Y + M + + +I MLY RRF PY+V ++ G++ E + +
Sbjct: 82 VKKVKQRLEWYRHAHGKDMPLRAIARLIQTMLYARRFFPYYVYNILGGIE-EDGTGAVYS 140
Query: 124 MDLIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPNLEPDDL-----FETIAQAL 171
D +G + + G S +Q+Y +T + P L + +
Sbjct: 141 FDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTAPPDSAHPTHLPLPTVLSIVIDSF 200
Query: 172 VNACERNAVSGWGAVVYII 190
+A ER+ G G +YI+
Sbjct: 201 TSATERHIEVGDGLEMYIV 219
>gi|41614998|ref|NP_963496.1| hypothetical protein NEQ203 [Nanoarchaeum equitans Kin4-M]
gi|74579825|sp|Q74MP5.1|PSB_NANEQ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|40068722|gb|AAR39057.1| NEQ203 [Nanoarchaeum equitans Kin4-M]
Length = 196
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 10 SIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRF 69
+I+ + ++ V +A DK+ + QKI + ++ + G D Q + + ++
Sbjct: 3 TIIGIKARDGVVLASDKQASMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILKT 62
Query: 70 RQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEP--MVVGLDPETAEPIIGNMDLI 127
L EL R M+ ++S++LY+ RF ++ P +++ + E I ++D I
Sbjct: 63 ELKLRELYSRRTMNVIEAANLLSHLLYQNRF---YLNPLGLLIAGPINSKEFGIYSLDGI 119
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G +++ D+ G G E + P++ D + +AL ++ R+ SG+G +
Sbjct: 120 GAISEIKDYFAEGSGGVIALGTLEAEYNPDITVRDAIKLAEKALKSSIARDVFSGYGIEI 179
Query: 188 YIIEQDKV 195
Y I + V
Sbjct: 180 YTITKKGV 187
>gi|391863506|gb|EIT72814.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
[Aspergillus oryzae 3.042]
Length = 261
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 100/230 (43%), Gaps = 32/230 (13%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVG--------SHMYVGLPG 55
T NGGS + +TG + +A D R + G + + K+F++G +H+ + + G
Sbjct: 35 TDNGGSTLGITGADFAILAGDTR-SVAGYNINSRYAPKVFKIGGDDDTGEGAHIILSVVG 93
Query: 56 LATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
A D Q + +++ +Y+ + + MS + +S +LY++RF PY+V ++ GLD E
Sbjct: 94 FAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLD-E 152
Query: 116 TAEPIIGNMDLIGCVNQPSDFVVGG--------------------PCSDQLYGMCETLWE 155
E + + D +G + G P S + + E
Sbjct: 153 EGEGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPSSGDGHALEPKKPE 212
Query: 156 PNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
P L + + + + A +A ER+ G G + +I Q+ + + + D
Sbjct: 213 P-LPRETVEQLVRDAFTSAVERHIEVGDGLQMMVITQNGIEEIYTPLKKD 261
>gi|126458649|ref|YP_001054927.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595741|sp|A3MS44.1|PSB1_PYRCJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126248370|gb|ABO07461.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum calidifontis
JCM 11548]
Length = 201
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Query: 10 SIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKIRF 69
+ V + K+ V +A DKR +KI+++ H+ + G D Q+V +
Sbjct: 3 TTVGIVAKDGVVLATDKRVTAGYYIAHKAGEKIWKIDDHVAATMSGGVADLQSVLSFLSL 62
Query: 70 RQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLIGC 129
R Y ++ R + + L+ +S +L+ R Y V +V G+D E P++ +D +G
Sbjct: 63 RAREYRVEHKRPIPIRALVNYVSLLLFYSRPYIYLVHSIVGGVDAEEG-PVLYMVDWLGT 121
Query: 130 VNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA-VVY 188
V + ++ G S G E + +L D+ E +A+ A + SG G VV
Sbjct: 122 VTK-EKYIATGSGSPYAKGALEVAYREDLTIDEAVELAIRAVKAAIRNDPGSGEGIDVVT 180
Query: 189 IIEQD 193
I + D
Sbjct: 181 ITKSD 185
>gi|448358238|ref|ZP_21546923.1| proteasome endopeptidase complex subunit beta [Natrialba
chahannaoensis JCM 10990]
gi|445646809|gb|ELY99793.1| proteasome endopeptidase complex subunit beta [Natrialba
chahannaoensis JCM 10990]
Length = 243
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + + G Q+ +R NLYE
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTMVGSVGGAQSFIGSLRAEVNLYEA 117
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ +S L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 118 RRGEPISMDALATLAGNFA---RGGPFFAIHPILGGVDEEGSH--VYSIDPAGGVME-DD 171
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG+ E +E +L D+ A+A+ +A ER+ SG G + I + V
Sbjct: 172 YTVTGSGMQLAYGLLEQEFEEDLSNDEATTIAARAIKSAAERDTGSGNGVFLCEITDEGV 231
Query: 196 TVR 198
+
Sbjct: 232 DIH 234
>gi|67526597|ref|XP_661360.1| hypothetical protein AN3756.2 [Aspergillus nidulans FGSC A4]
gi|40740774|gb|EAA59964.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259481696|tpe|CBF75458.1| TPA: putative proteasome core beta subunit (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 233
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVGSHMYVGLPGLATDTQTVYQK 66
G SI+A+ K+ V + D R G +A+ K+ QV ++ G A DTQ V
Sbjct: 31 GTSIMAINFKDGVILGADSRT-TTGAYIANRVTDKLTQVHDTIWCCRSGSAADTQAVADI 89
Query: 67 IRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDL 126
+ + N+Y + N S +V A+ + YE + ++ G DP + ++ L
Sbjct: 90 VSYHLNMYSIVNNEPPSTQVAAALFQELCYENK-DMLSAGIIIAGYDPRHGGQVY-SIPL 147
Query: 127 IGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAV 186
G +++ + + +GG S +YG C+ W+ N+ ++ E + AL A + + SG G +
Sbjct: 148 GGSLHKQA-YSIGGSGSTYIYGYCDANWKENMTEEEGVEFVRGALREAIKWDGSSG-GVI 205
Query: 187 VYIIEQDKVTVRHV 200
++ RH+
Sbjct: 206 RMVVLTKNGAQRHL 219
>gi|448355944|ref|ZP_21544693.1| proteasome endopeptidase complex subunit beta [Natrialba
hulunbeirensis JCM 10989]
gi|445634652|gb|ELY87831.1| proteasome endopeptidase complex subunit beta [Natrialba
hulunbeirensis JCM 10989]
Length = 243
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 18 NCVAIACDKRFGIQGTALAD-NFQKIFQVGSHMYVGLPGLATDTQTVYQKIRFRQNLYEL 76
+ V IA D R + G +++ N QK+ Q+ + + G Q+ +R NLYE
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTMVGSVGGAQSFIGSLRAEVNLYEA 117
Query: 77 KENRKMSPKVLLAMISNMLYERRFGPYF-VEPMVVGLDPETAEPIIGNMDLIGCVNQPSD 135
+ +S L + N R GP+F + P++ G+D E + + ++D G V + D
Sbjct: 118 RRGEPISMDALATLAGNFA---RGGPFFAIHPILGGVDEEGSH--VYSIDPAGGVME-DD 171
Query: 136 FVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVVYIIEQDKV 195
+ V G YG+ E +E +L D+ A+A+ +A ER+ SG G + I + V
Sbjct: 172 YTVTGSGMQLAYGLLEQEFEEDLSNDEATTIAARAIKSAAERDTGSGNGVFLCEITDEGV 231
Query: 196 TVR 198
+
Sbjct: 232 DIH 234
>gi|67539228|ref|XP_663388.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
gi|40743687|gb|EAA62877.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
gi|259484727|tpe|CBF81196.1| TPA: putative proteasome core component, beta 6 subunit (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 261
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVG--------SHMYVGLPG 55
T NGGS++ +TGK+ +A D R G + + K+F++G +H+ + + G
Sbjct: 35 TDNGGSVLGITGKDFAVLAGDTR-STSGYNINSRYVPKVFKIGGEDETGKGAHILLSVVG 93
Query: 56 LATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
A D + +++ +Y+ + + MS + +S +LY++RF PY+V+ ++ GLD E
Sbjct: 94 FAADGLALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVQAILAGLDEE 153
Query: 116 TAEPIIG 122
+ G
Sbjct: 154 GKGALYG 160
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Query: 6 YNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQ 65
+ G + V + K+ V +A D+R + A N KI ++ H+ + G D + +
Sbjct: 5 FKGTTTVGIVCKDGVVLAADRRASLGNIVYARNVTKIHKIDEHLAIAGAGDVGDILNLVR 64
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMD 125
+R LY + R+MS + L +++N+L ++ PY +V G D + + ++D
Sbjct: 65 LLRAEAKLYYAQFGREMSARALATLLANILNGYKYFPYMAWFLVGGYDEKAR---LYSVD 121
Query: 126 LIGCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGA 185
+G + + ++ G + Y + + + ++ + + +A+ A +R+ SG G
Sbjct: 122 AVGGITEDK-YMAAGSGMEFAYSILDAEYSDDITVKEGVKLAVKAINTAIKRDVFSGDGI 180
Query: 186 VVYIIEQD 193
+V I ++
Sbjct: 181 LVVTITKE 188
>gi|388851426|emb|CCF54828.1| probable PRE7-20S proteasome subunit(beta6) [Ustilago hordei]
Length = 291
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 7 NGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTVYQ 65
NGGSI A+ G + IA D R G + ++ K+F++ + G A D + +
Sbjct: 36 NGGSIAAVCGTDFCVIASDTRQST-GYNIQTRYKPKVFRLNDKATLATNGFAADAEALVS 94
Query: 66 KIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
++R R +Y R M + MIS +LY +RF PY+V ++ GLD E
Sbjct: 95 RVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVYNILGGLDEE 144
>gi|367011887|ref|XP_003680444.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
gi|359748103|emb|CCE91233.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
Length = 241
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 20/219 (9%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVY 64
T NGG+I+ + G++ +A D R + + + K+F G ++ + G A D + +
Sbjct: 25 TDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRHESKVFDCGDNIVMSANGFAADGEALV 84
Query: 65 QKIRFRQNLYELKEN-RKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
++ + Y N +K+S I ++LY +RF PY+V ++ GLD E + + +
Sbjct: 85 KRFKNSVKWYHFDHNDKKLSLSSAARNIQHLLYGKRFFPYYVHTIIAGLDEE-GKGAVYS 143
Query: 124 MDLIGCVNQPSDFVVGGPCSDQLYGMCE------TLWEPN-----------LEPDDLFET 166
D +G + GG + + + +EP L +++ +
Sbjct: 144 FDPVGSYEREQ-CRAGGAAASLIMPFLDNQVNFKNQFEPGTNGKVRRPQTYLSIEEVIKL 202
Query: 167 IAQALVNACERNAVSGWGAVVYIIEQDKVTVRHVKTRMD 205
+ A +A ER+ G G + I+ +D V + + D
Sbjct: 203 VRDAFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 241
>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
gi|452209277|ref|YP_007489391.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
gi|74550648|sp|Q8PZ04.1|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
gi|452099179|gb|AGF96119.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
Length = 210
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 8 GGSIVAMTGKNCVAIACDKRFGIQGTALADNFQKIFQVGSHMYVGLPGLATDTQTVYQKI 67
G + V + + + +A ++R + + +K++Q+ + + G D Q + + +
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68
Query: 68 RFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGNMDLI 127
LY+++ N M+ K + ++SN L R+ P V+ ++ G+D P I ++D +
Sbjct: 69 SVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGVDKNG--PAIYSLDPM 126
Query: 128 GCVNQPSDFVVGGPCSDQLYGMCETLWEPNLEPDDLFETIAQALVNACERNAVSGWGAVV 187
G + + G S YG+ E + ++ + + +A+ NA +R++ SG V
Sbjct: 127 GGSIEETRISATGSGSPMAYGVLEDQYREDIAVKEGLDLAIRAIHNATKRDSASGENIDV 186
Query: 188 YIIEQD---KVTVRHVKTR 203
+I ++ ++ VK+R
Sbjct: 187 VVITKEAFKRLDPEEVKSR 205
>gi|392559294|gb|EIW52479.1| proteasome subunit [Trametes versicolor FP-101664 SS1]
Length = 252
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNFQ-KIFQVGSHMYVGLPGLATDTQTV 63
T NGG+I+A+ G + IA D R +G ++ + K+F++ + + G A D
Sbjct: 18 TDNGGTILAIAGADFTVIAGDTRQS-EGYSIQTRYAPKVFRLTDRAVLAVNGFAADGNMF 76
Query: 64 YQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPETAEPIIGN 123
+K++ R Y + M + + +I MLY +RF PY+V ++ G++ E + +
Sbjct: 77 VKKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYAQRFFPYYVYNILGGIE-EDGSGAVYS 135
Query: 124 MDLIGCVNQPSDFVVGGPCS-------DQLYGMCETLWEPNLEPD-----DLFETIAQAL 171
D +G + + G S +Q+Y +T P D+ + +
Sbjct: 136 FDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTAAVGQSHPTHLPLPDVLAIVIDSF 195
Query: 172 VNACERNAVSGWGAVVYII 190
+A ER+ G G +Y++
Sbjct: 196 TSATERHIEVGDGLEIYVV 214
>gi|119467908|ref|XP_001257760.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
gi|119405912|gb|EAW15863.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
Length = 261
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 5 TYNGGSIVAMTGKNCVAIACDKRFGIQGTALADNF-QKIFQVG--------SHMYVGLPG 55
T NGGS + +TG + +A D R + G + + K+F++G +H+ + + G
Sbjct: 35 TDNGGSTLGITGSDFAILAGDTR-SVAGYNINSRYVPKVFKIGGDAETGEGAHILLSVVG 93
Query: 56 LATDTQTVYQKIRFRQNLYELKENRKMSPKVLLAMISNMLYERRFGPYFVEPMVVGLDPE 115
A D Q + +++ +Y+ + + MS + +S +LY++RF PY+V ++ GLD E
Sbjct: 94 FAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDEE 153
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,179,174,614
Number of Sequences: 23463169
Number of extensions: 128612048
Number of successful extensions: 257671
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 1809
Number of HSP's that attempted gapping in prelim test: 255209
Number of HSP's gapped (non-prelim): 3119
length of query: 205
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 69
effective length of database: 9,168,204,383
effective search space: 632606102427
effective search space used: 632606102427
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 73 (32.7 bits)