Query psy15286
Match_columns 707
No_of_seqs 294 out of 2237
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 17:12:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15286.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15286hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tll_A Nitric-oxide synthase, 100.0 1.7E-80 6E-85 726.0 41.6 511 1-705 161-677 (688)
2 3qe2_A CPR, P450R, NADPH--cyto 100.0 5.6E-79 1.9E-83 705.9 45.0 476 1-682 132-618 (618)
3 2bpo_A CPR, P450R, NADPH-cytoc 100.0 4.4E-76 1.5E-80 688.6 39.4 489 1-681 161-682 (682)
4 1f20_A Nitric-oxide synthase; 100.0 2.2E-74 7.4E-79 642.5 36.6 430 61-683 2-435 (435)
5 3qfs_A CPR, P450R, NADPH--cyto 100.0 7.4E-74 2.5E-78 639.8 41.0 397 81-682 54-458 (458)
6 2qtl_A MSR;, methionine syntha 100.0 7.1E-72 2.4E-76 635.9 39.1 411 82-682 107-539 (539)
7 4dql_A Bifunctional P-450/NADP 100.0 7.7E-72 2.6E-76 614.2 35.8 385 88-682 5-392 (393)
8 1ddg_A Sulfite reductase (NADP 100.0 2.7E-66 9.4E-71 566.9 33.7 366 83-681 5-374 (374)
9 1fnb_A Ferredoxin-NADP+ reduct 100.0 4.2E-31 1.4E-35 281.3 20.4 274 85-681 33-314 (314)
10 3vo2_A Putative uncharacterize 100.0 8.9E-31 3E-35 278.6 21.6 275 84-681 28-310 (310)
11 2bmw_A Ferredoxin--NADP reduct 100.0 1.5E-30 5.2E-35 275.4 22.0 278 85-681 17-304 (304)
12 2b5o_A FNR, ferredoxin--NADP r 100.0 2.1E-29 7.1E-34 277.9 22.5 275 85-681 118-402 (402)
13 2rc5_A Ferredoxin-NADP reducta 100.0 1.1E-27 3.8E-32 254.7 22.1 112 562-681 196-314 (314)
14 3jqq_A Ferredoxin NADP reducta 99.9 5.8E-27 2E-31 250.3 18.6 298 84-681 10-316 (316)
15 3lo8_A Ferredoxin--NADP reduct 99.9 1.1E-26 3.9E-31 246.6 12.8 113 562-681 193-311 (311)
16 2r6h_A NADH:ubiquinone oxidore 99.7 3.2E-18 1.1E-22 179.2 6.8 100 562-682 185-290 (290)
17 1tvc_A Methane monooxygenase c 99.7 3.4E-17 1.2E-21 168.0 11.2 97 562-683 145-246 (250)
18 1qfj_A Protein (flavin reducta 99.7 1.8E-17 6.3E-22 167.8 5.4 95 562-682 130-230 (232)
19 1fdr_A Flavodoxin reductase; f 99.7 5E-17 1.7E-21 166.3 8.1 106 562-681 134-247 (248)
20 1umk_A B5R, NADH-cytochrome B5 99.7 3.4E-17 1.2E-21 170.2 6.8 83 561-651 174-265 (275)
21 4eh1_A Flavohemoprotein; struc 99.7 3.2E-17 1.1E-21 167.0 5.5 91 565-683 144-237 (243)
22 1cqx_A Flavohemoprotein; globi 99.6 1.3E-16 4.6E-21 175.0 9.2 98 562-683 293-398 (403)
23 4fk8_A Ferredoxin--NADP reduct 99.6 3.4E-17 1.2E-21 170.0 4.0 105 562-681 150-268 (271)
24 1krh_A Benzoate 1,2-dioxygenas 99.6 8.5E-17 2.9E-21 172.5 7.0 97 562-683 238-337 (338)
25 2bgi_A Ferredoxin-NADP(H) redu 99.6 1.6E-16 5.4E-21 165.5 8.8 107 562-682 148-267 (272)
26 1gvh_A Flavohemoprotein; oxido 99.6 8.4E-17 2.9E-21 176.2 6.0 97 562-683 287-392 (396)
27 2qdx_A Ferredoxin reductase; o 99.6 1.3E-16 4.5E-21 164.3 6.4 108 562-682 134-254 (257)
28 4g1v_A Flavohemoglobin; three 99.6 2.4E-16 8.1E-21 173.0 8.5 92 562-683 300-392 (399)
29 2eix_A NADH-cytochrome B5 redu 99.6 5.9E-16 2E-20 157.8 8.9 83 562-651 145-233 (243)
30 2cnd_A NADH-dependent nitrate 99.6 4.7E-16 1.6E-20 161.0 4.8 81 562-650 166-258 (270)
31 1ep3_B Dihydroorotate dehydrog 99.5 2.2E-15 7.4E-20 156.0 5.0 73 563-650 137-211 (262)
32 2pia_A Phthalate dioxygenase r 99.5 1.2E-14 4E-19 155.2 4.8 88 563-683 139-227 (321)
33 3a1f_A Cytochrome B-245 heavy 99.0 5.3E-11 1.8E-15 115.4 0.7 90 561-651 51-169 (186)
34 2gpj_A Siderophore-interacting 98.9 3.8E-10 1.3E-14 116.1 3.2 96 563-688 138-233 (252)
35 3lrx_A Putative hydrogenase; a 98.8 2.7E-10 9.2E-15 109.4 -1.0 78 563-651 50-135 (158)
36 3lyu_A Putative hydrogenase; t 98.7 7.7E-10 2.6E-14 104.4 -1.4 77 563-651 45-130 (142)
37 3qfs_A CPR, P450R, NADPH--cyto 98.6 2.5E-08 8.6E-13 111.3 5.9 81 308-388 197-278 (458)
38 1f20_A Nitric-oxide synthase; 98.5 6.7E-08 2.3E-12 107.3 5.0 106 441-547 63-168 (435)
39 3qe2_A CPR, P450R, NADPH--cyto 98.5 8E-08 2.7E-12 111.2 5.7 82 307-388 356-438 (618)
40 4dql_A Bifunctional P-450/NADP 98.5 1.3E-07 4.4E-12 103.7 6.3 79 310-388 136-216 (393)
41 3hr4_A Nitric oxide synthase, 98.5 9.4E-08 3.2E-12 96.6 4.8 69 1-69 148-216 (219)
42 2qtl_A MSR;, methionine syntha 98.4 2.2E-07 7.7E-12 105.8 5.8 83 306-388 252-337 (539)
43 1tll_A Nitric-oxide synthase, 98.3 3E-07 1E-11 107.7 5.1 106 441-547 284-389 (688)
44 2bpo_A CPR, P450R, NADPH-cytoc 98.0 1.7E-06 5.9E-11 101.2 3.3 83 307-389 387-477 (682)
45 1ddg_A Sulfite reductase (NADP 98.0 6.7E-06 2.3E-10 89.5 6.6 71 316-387 132-202 (374)
46 1bvy_F Protein (cytochrome P45 92.7 0.053 1.8E-06 53.1 3.0 38 1-38 130-167 (191)
47 3lo8_A Ferredoxin--NADP reduct 72.5 7.8 0.00027 39.9 7.8 50 84-134 23-72 (311)
48 4fk8_A Ferredoxin--NADP reduct 37.2 44 0.0015 33.2 6.0 39 88-132 18-56 (271)
49 2qdx_A Ferredoxin reductase; o 36.9 51 0.0018 32.5 6.4 39 89-133 3-41 (257)
50 1qfj_A Protein (flavin reducta 34.1 48 0.0016 32.0 5.5 39 90-134 3-41 (232)
51 2r6h_A NADH:ubiquinone oxidore 33.5 66 0.0022 32.2 6.6 41 88-134 8-50 (290)
52 2bgi_A Ferredoxin-NADP(H) redu 31.9 63 0.0021 32.2 6.1 37 90-132 17-53 (272)
53 1tvc_A Methane monooxygenase c 30.4 55 0.0019 32.1 5.3 42 86-133 7-54 (250)
54 2pia_A Phthalate dioxygenase r 29.6 86 0.0029 32.2 6.8 42 87-134 6-50 (321)
55 1fdr_A Flavodoxin reductase; f 28.5 89 0.003 30.4 6.5 37 89-132 4-40 (248)
56 1umk_A B5R, NADH-cytochrome B5 28.0 1E+02 0.0034 30.6 6.8 53 269-349 65-117 (275)
57 4eh1_A Flavohemoprotein; struc 27.4 97 0.0033 29.9 6.5 40 89-134 3-45 (243)
58 2eix_A NADH-cytochrome B5 redu 27.2 1E+02 0.0035 29.8 6.6 41 87-133 9-52 (243)
59 2cnd_A NADH-dependent nitrate 25.9 94 0.0032 30.6 6.2 40 87-132 10-52 (270)
60 1ep3_B Dihydroorotate dehydrog 23.5 87 0.003 31.0 5.4 39 90-134 6-45 (262)
61 1krh_A Benzoate 1,2-dioxygenas 22.4 1.1E+02 0.0039 31.3 6.2 41 88-134 107-150 (338)
62 3vo2_A Putative uncharacterize 21.6 47 0.0016 34.0 3.0 45 344-388 87-135 (310)
No 1
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=100.00 E-value=1.7e-80 Score=725.98 Aligned_cols=511 Identities=38% Similarity=0.689 Sum_probs=425.3
Q ss_pred ChhccCceecccceeccCCCCcHHHHHHHHHHHHHHHHHHcCCCCCCccccc--ccccccccccCceeeeccCCCccccc
Q psy15286 1 MLGELGGERLLKLRAGDEMCGQEQAFRSWAPEVFNVACETFCLDDDETLSDA--TQVISSVTLNASTVRFLPMTTADSLV 78 (707)
Q Consensus 1 ~l~~lGa~r~~~~g~gD~~~g~e~~f~~W~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (707)
+|++|||+|++++|+||+++|+|++|+.|.+++|+++++.|+++.......+ ........|....+++........+.
T Consensus 161 ~L~~lGa~rl~~~~~~D~~~g~e~~f~~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (688)
T 1tll_A 161 LLEELGGERILKMREGDELCGQEEAFRTWAKKVFKAACDVFCVGDDVNIEKPNNSLISNDRSWKRNKFRLTYVAEAPDLT 240 (688)
T ss_dssp HHHHTTCEESSCCEEEETTTTHHHHHHHHHHHHHHHHHHHHTCCSSSCCC-------CCSSSCCTTTEEEEECSCCCCHH
T ss_pred HHHHcCCceeecceeeccCCCcHHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcceEEeccccccccc
Confidence 4789999999999999999999999999999999999999987654322110 00001112333344443322111121
Q ss_pred ccccccCCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeCC--CCCCCCCCCeeEEcccCCHHHHHHHHHHhcCCCCCCCC
Q psy15286 79 TGLSKVHSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRKP--HDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDE 156 (707)
Q Consensus 79 ~~~~~~~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~--~~l~Y~pGD~l~I~P~N~~~~V~~lL~~L~L~~~d~d~ 156 (707)
...+.++.++++.|+|+.|++||+ .+++|+++||+|++. .+++|+|||+|+|+|.|+++.|+++|++|++ ..++|+
T Consensus 241 ~~~~~~~~~~~~~a~v~~~~~Lt~-~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l~~-~~~~d~ 318 (688)
T 1tll_A 241 QGLSNVHKKRVSAARLLSRQNLQS-PKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLED-APPANH 318 (688)
T ss_dssp HHHHHHTTSCCEEEEEEEEEECSC-TTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTCSS-CCCSCS
T ss_pred ccccccccCCceEEEEEeeeecCC-CCCCceEEEEEEecCCCCCCccCCCCEEEEecCCCHHHHHHHHHHhCC-CCCCCe
Confidence 222345677899999999999999 889999999999983 3799999999999999999999999999985 368999
Q ss_pred ceEecccccccccccccccCCCCCCCCcccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHHHHHHHHhhhchHHHHHHh
Q psy15286 157 PMELQVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATDSAAYEDWR 236 (707)
Q Consensus 157 ~i~l~~~~~~~~~~~~~~~~~~~~~~Pp~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~ek~~L~~L~s~~~~y~~~~ 236 (707)
.|++...++..+..+..+.|....++|++|++++|++|+||+++|++.||+.||+|++|+.+|++|++|+++.+.|.+|+
T Consensus 319 ~v~~~~~~~~~~p~~~~~~~~~~~~~p~~tl~~~l~~~lDi~~~p~~~~l~~la~~a~~~~ek~~L~~l~~~~~~~~~~~ 398 (688)
T 1tll_A 319 VVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSKGLQEYEEWK 398 (688)
T ss_dssp CEEEEEEEECCCSSSCCEEEEECCSSCSBCHHHHHHHTBCCSSCCCHHHHHHHHTTBCCHHHHHHHHHHTTCSHHHHHHH
T ss_pred EEEEeccccccCCCcccccccccCCCCCccHHHHHHhheeCCCCCCHHHHHHHHHHcCCHHHHHHHHHHhcCHHHHHHHH
Confidence 99987543322112323456666778899999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCHHHHHhhCCCCCCChHHHHHHhCCCCCCcccccCCCCCCCCeEEEEEEEEEeeccCCCCCcccccccccccccc
Q psy15286 237 HWRFPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGASIHSDSAAYEDWRHWRF 316 (707)
Q Consensus 237 ~~~~~slldvL~~f~s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~~p~~i~ltvavv~y~t~~~~~~~r~GlcS~~~~~~~ 316 (707)
...+++++|+|.+||++++|+++++..+|+++||.|||||+|..+++.++|+|++++|.++.|.++.+.|+||+|
T Consensus 399 ~~~~~~i~evl~~fps~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~~G~~S~~----- 473 (688)
T 1tll_A 399 WGKNPTMVEVLEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSW----- 473 (688)
T ss_dssp HHHCCCHHHHHHHSTTBCCCHHHHHHHSCBCCCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEEECHHHHH-----
T ss_pred hhcCCCHHHHHHhCCCcCCCHHHHHHhCcccceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcCCCchhHH-----
Confidence 999999999999999999999999999999999999999999988999999999999998876677899999999
Q ss_pred ccHHHHhhhCCCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeecccccCccCccccccccccccccccC
Q psy15286 317 PHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKVHSRKVWQCPLIKKWNLYG 396 (707)
Q Consensus 317 ~~~~d~l~~fps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (707)
|..+.+|+.+.+++
T Consensus 474 --------------------L~~l~~Gd~v~v~~---------------------------------------------- 487 (688)
T 1tll_A 474 --------------------LNRIQADDVVPCFV---------------------------------------------- 487 (688)
T ss_dssp --------------------HTTCCTTSEEEEEE----------------------------------------------
T ss_pred --------------------HHhCCCCCEEEEEe----------------------------------------------
Confidence 87788777665554
Q ss_pred CCCCCCCcEEEeeccCCCCCCCCCCCCCCceeeecccccCCCCCcccCCCCcccccccCchhhhhhhhhhccCCCCCCCc
Q psy15286 397 SQPVAFAPVTVQFRSDQKDSSRESDGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDE 476 (707)
Q Consensus 397 ~~~~~~~~~~~~~r~~~~~f~lp~~~~~Piim~~~~~~~~~~~~~~i~~Gt~~~~~~~~~~~~~~~~~~~~~~~GiAPfr 476 (707)
+++ ..|++|.++..|+|| ||+|| ||||||
T Consensus 488 -------------~p~-g~F~lp~~~~~piIl--------------IagGt-----------------------GIAP~~ 516 (688)
T 1tll_A 488 -------------RGA-PSFHLPRNPQVPCIL--------------VGPGT-----------------------GIAPFR 516 (688)
T ss_dssp -------------ECC-GGGSCCSCTTSCEEE--------------EEEGG-----------------------GGTTHH
T ss_pred -------------ccC-CCcccCcCCCCCEEE--------------EEcCc-----------------------chHHHH
Confidence 221 138899888899999 99999 999999
Q ss_pred hhhhhhhccccCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhhcccCCcchHHHHHHHHHhhhhhhhhh
Q psy15286 477 PMELQVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATKMQNSRVIK 556 (707)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (707)
+|+| +|. ... +
T Consensus 517 -----------------s~l~--~~~---~~~-----------------------------------------------~ 527 (688)
T 1tll_A 517 -----------------SFWQ--QRQ---FDI-----------------------------------------------Q 527 (688)
T ss_dssp -----------------HHHH--HHH---HHH-----------------------------------------------H
T ss_pred -----------------HHHH--HHH---Hhh-----------------------------------------------h
Confidence 9999 655 210 0
Q ss_pred cccccCCceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCCCCccchhhHHHhh-HHHHHHHhhcCCcEEEE
Q psy15286 557 FGLQELGKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPTIPKTYVQDLMKKE-ASMLYRELIKEGGHFYV 634 (707)
Q Consensus 557 ~~~~~~g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~~~k~YVQd~L~~~-~~~l~~~L~~~ga~iYV 634 (707)
..+...++++||||||+++.| +|.+||++|.+.+.+++++++|||++.+.++||||+|.++ .+.+++++.+.+++|||
T Consensus 528 ~~~~~~~~v~L~~G~R~~~~D~ly~dEL~~~~~~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~l~~~l~~~l~~~~~~vYv 607 (688)
T 1tll_A 528 HKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYV 607 (688)
T ss_dssp HSCCCCCCEEEEEEESCTTTTCTTHHHHHHHHHTTSEEEEEEEESSCTTSCCCCHHHHHHHSSHHHHHHHHHTSCCEEEE
T ss_pred hccCCCCCEEEEEEeccchhhhhHHHHHHHHHHcCCceEEEEEECCCCCCCccchhhhhHHhHHHHHHHhhccCCcEEEE
Confidence 013456899999999999878 9999999999888777899999999754589999999988 78888877567899999
Q ss_pred eCChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEecccccchhhhhhhHHHHHHhhhhc
Q psy15286 635 CGDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFGITLRTAEVHKSSRESARIRMYQS 705 (707)
Q Consensus 635 CGp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~~~~~~~~~~~~~~~~~~~~~~~~ 705 (707)
|||++|+++|.++|.+++++++|+++++|++|+++|++++|||.|+|+..++++++|.++|++| +||+.+
T Consensus 608 CGp~~M~~~V~~~L~~i~~~~gg~~~~~a~~~l~~l~~~~ry~~Evf~~~~~~~~~~~~~~~~~-~~~~~~ 677 (688)
T 1tll_A 608 CGDVTMAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNRYHEDIFGVTLRTYEVTNRLRSES-IAFIEE 677 (688)
T ss_dssp EEEHHHHHHHHHHHHHHHHTTTCCCTTHHHHHHHHHHHTTCEEEEEEESCSSHHHHHHHHHHHT-C-----
T ss_pred eCCHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhhcCCEEEEecCCcccchhhhhhhHHHH-HHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999 777754
No 2
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=100.00 E-value=5.6e-79 Score=705.89 Aligned_cols=476 Identities=28% Similarity=0.466 Sum_probs=390.7
Q ss_pred ChhccCceecccceeccCCCCcHHHHHHHHHHHHHHHHHHcCCCCCCcc-cccccccccc-cccCceeeeccCCCccccc
Q psy15286 1 MLGELGGERLLKLRAGDEMCGQEQAFRSWAPEVFNVACETFCLDDDETL-SDATQVISSV-TLNASTVRFLPMTTADSLV 78 (707)
Q Consensus 1 ~l~~lGa~r~~~~g~gD~~~g~e~~f~~W~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 78 (707)
+|++|||++++++|+||++.++|++|++|++.+|++|++.|+++..... ..+.+.+... ......+............
T Consensus 132 ~L~~lGa~~~~~~g~~D~~~~~~~~~~~W~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (618)
T 3qe2_A 132 RLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWLAVCEHFGVEATGEESSIRQYELVVHTDIDAAKVYMGEMGRLKSYE 211 (618)
T ss_dssp HHHHTTCEESSCCEEEETTSCHHHHHHHHHHHHHHHHHHHHTCCCC---CCCCSEEEEECTTCCGGGSBCSCCSSTTTTT
T ss_pred HHHhCCCCEeecccccccCCCcHHHHHHHHHHHHHHHHHHhCCCcccccccccceeEEeccccccccccccccccccccc
Confidence 4789999999999999999999999999999999999999987542110 0000000000 0000000000000000000
Q ss_pred ccccccCCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeC-CCCCCCCCCCeeEEcccCCHHHHHHHHHHhcCCCCCCCCc
Q psy15286 79 TGLSKVHSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRK-PHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEP 157 (707)
Q Consensus 79 ~~~~~~~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l-~~~l~Y~pGD~l~I~P~N~~~~V~~lL~~L~L~~~d~d~~ 157 (707)
.....+..++++.|+|+.|++||. +++|+++||+|++ +++++|+|||+|+|+|.|+++.|+++|++|| +++|+.
T Consensus 212 ~~~~~~~~~~~~~a~v~~n~~Lt~--~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~---l~~d~~ 286 (618)
T 3qe2_A 212 NQKPPFDAKNPFLAAVTTNRKLNQ--GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILG---ADLDVV 286 (618)
T ss_dssp SCCSCCSSSSCEEEEEEEEEECSC--CSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTT---CCTTCE
T ss_pred ccCCCcccCCcEEEEEEeEEEcCC--CCCCcEEEEEEEcCCCCcccccCCEEEEEcCCCHHHHHHHHHHhC---cCCCce
Confidence 112234567789999999999997 5689999999999 6689999999999999999999999999999 478999
Q ss_pred eEecccccccccccccccCCCCCCCC-cccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHHHHHHHHhhh----chHHH
Q psy15286 158 MELQVLSETHTSTEVIKSWKPHERLP-RASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLAT----DSAAY 232 (707)
Q Consensus 158 i~l~~~~~~~~~~~~~~~~~~~~~~P-p~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~ek~~L~~L~s----~~~~y 232 (707)
|++...++.. ....++| |+|++++|++|+||+++|+++||+.||+|++|+.+|++|++|++ +++.|
T Consensus 287 v~~~~~~~~~---------~~~~~~p~~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~ 357 (618)
T 3qe2_A 287 MSLNNLDEES---------NKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELY 357 (618)
T ss_dssp EEEEESCTTC---------SCCSSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHHTTCSSSHHHHHH
T ss_pred EEEecCCccc---------cCCCCCCCceEHHHhhhhEeecCCCCcHHHHHHHHHHcCCHHHHHHHHHhhccChhhHHHH
Confidence 9987543321 1234677 89999999999999999999999999999999999999999983 46789
Q ss_pred HHHhhcCCCCHHHHHhhCCCCCCChHHHHHHhCCCCCCcccccCCCCCCCCeEEEEEEEEEeeccCCCCCcccccccccc
Q psy15286 233 EDWRHWRFPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGASIHSDSAAYEDWR 312 (707)
Q Consensus 233 ~~~~~~~~~slldvL~~f~s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~~p~~i~ltvavv~y~t~~~~~~~r~GlcS~~~ 312 (707)
.+|+..++++++|+|++||++++|++.|++.+|+++||+|||||||..+|+.++|+|++|+|.+.. ++.+.|+||+|
T Consensus 358 ~~~~~~~~~~i~dvL~~fps~~~p~~~l~~~lp~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~--~~~~~G~~S~~- 434 (618)
T 3qe2_A 358 LSWVVEARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKA--GRINKGVATNW- 434 (618)
T ss_dssp HHHTTTTTCCHHHHHHHSTTBCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTT--SCEEECHHHHH-
T ss_pred HHHHhhcCCCHHHHHHhCCccCCCHHHHHHhccccccceeccccCCcCCCCEEEEEEEEEEEecCC--CCCCCCcccHH-
Confidence 999999999999999999999999999999999999999999999999999999999999999876 56899999999
Q ss_pred ccccccHHHHhhhCCCCCCChHHHHhccCC-CCceeEEecCCCCCCCCcceeEEEEEeecccccCccCcccccccccccc
Q psy15286 313 HWRFPHLLEVLEQFPSIHLPPALLVAQLTP-LQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKVHSRKVWQCPLIKK 391 (707)
Q Consensus 313 ~~~~~~~~d~l~~fps~~~~~~~lL~~L~~-g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~~~~~~~~~~~~~~ 391 (707)
|..+.+ |+.-
T Consensus 435 ------------------------L~~l~~~Gd~~--------------------------------------------- 445 (618)
T 3qe2_A 435 ------------------------LRAKEPVGENG--------------------------------------------- 445 (618)
T ss_dssp ------------------------HHTCCCC-------------------------------------------------
T ss_pred ------------------------HHhhcccCCCC---------------------------------------------
Confidence 877655 4310
Q ss_pred ccccCCCCCCCCcEEEeeccCCCCCCCCCCCCCCceeeecccccCCCCCcccCCCCcccccccCchhhhhhhhhhccCCC
Q psy15286 392 WNLYGSQPVAFAPVTVQFRSDQKDSSRESDGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGG 471 (707)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~r~~~~~f~lp~~~~~Piim~~~~~~~~~~~~~~i~~Gt~~~~~~~~~~~~~~~~~~~~~~~G 471 (707)
....|.|+++.+ .|++|.++.+|+|| ||+|| |
T Consensus 446 ---------~~~~v~v~~p~g--~F~lp~~~~~piim--------------Ig~Gt-----------------------G 477 (618)
T 3qe2_A 446 ---------GRALVPMFVRKS--QFRLPFKATTPVIM--------------VGPGT-----------------------G 477 (618)
T ss_dssp ----------CCEEEEEEECC--SCCCCSSTTSCEEE--------------ECCGG-----------------------G
T ss_pred ---------cceEEEEEEecC--cccCCCCCCCCeEE--------------EcCCc-----------------------c
Confidence 001344555543 48999988999999 99999 9
Q ss_pred CCCCchhhhhhhccccCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhhcccCCcchHHHHHHHHHhhhh
Q psy15286 472 IDPDEPMELQVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATKMQN 551 (707)
Q Consensus 472 iAPfr~~~~~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (707)
||||| +|+| +|. ..
T Consensus 478 IAPfr-----------------s~l~--~r~---~~-------------------------------------------- 491 (618)
T 3qe2_A 478 VAPFI-----------------GFIQ--ERA---WL-------------------------------------------- 491 (618)
T ss_dssp GHHHH-----------------HHHH--HHH---HH--------------------------------------------
T ss_pred hhhHH-----------------HHHH--HHH---HH--------------------------------------------
Confidence 99999 9999 766 31
Q ss_pred hhhhhcccccCCceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCCCCccchhhHHHhhHHHHHHHhhcCCc
Q psy15286 552 SRVIKFGLQELGKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPTIPKTYVQDLMKKEASMLYRELIKEGG 630 (707)
Q Consensus 552 ~~~~~~~~~~~g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~~~k~YVQd~L~~~~~~l~~~L~~~ga 630 (707)
...+...++++||||||+++.| +|++||++|.+.|.++++++||||++. .++||||+|.++.+.+++++ ..++
T Consensus 492 ----~~~g~~~~~~~L~~G~R~~~~D~ly~~el~~~~~~g~l~~l~~a~Srd~~-~k~yVqd~l~~~~~~l~~~l-~~~a 565 (618)
T 3qe2_A 492 ----RQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQS-HKVYVQHLLKQDREHLWKLI-EGGA 565 (618)
T ss_dssp ----HHTTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHHTSSSEEEEEETTSSS-SCCCHHHHHHHTHHHHHHHH-HHTC
T ss_pred ----HhcCCCCCCEEEEEecCCCccccchHHHHHHHHhcCCCcEEEEEEcCCCC-CCCcHHHHHHHhHHHHHHHH-hCCc
Confidence 0113346899999999999778 999999999998888789999999975 69999999999999999988 7789
Q ss_pred EEEEeCCh-hhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEec
Q psy15286 631 HFYVCGDC-TMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFG 682 (707)
Q Consensus 631 ~iYVCGp~-~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~ 682 (707)
+||||||+ .|+++|+++|.+++++++++++++|++|+++|+++|||++|||+
T Consensus 566 ~vYvCGp~~~M~~~V~~~L~~i~~~~g~~~~~~a~~~~~~l~~~~RY~~Dv~s 618 (618)
T 3qe2_A 566 HIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVWS 618 (618)
T ss_dssp EEEEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEEC
T ss_pred EEEEECCchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCeEEeecC
Confidence 99999997 89999999999999999999999999999999999999999996
No 3
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=100.00 E-value=4.4e-76 Score=688.60 Aligned_cols=489 Identities=24% Similarity=0.379 Sum_probs=393.6
Q ss_pred ChhccCceecccceeccCCC-CcHHHHHHHHHHHHHHHHHHcCCCCCCcccccccccccc-cccCceeeeccCCC----c
Q psy15286 1 MLGELGGERLLKLRAGDEMC-GQEQAFRSWAPEVFNVACETFCLDDDETLSDATQVISSV-TLNASTVRFLPMTT----A 74 (707)
Q Consensus 1 ~l~~lGa~r~~~~g~gD~~~-g~e~~f~~W~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~ 74 (707)
+|+++||++++++|+||++. +++++|+.|.+++|++|++.+++++......+.+.+... .+. ..+....... .
T Consensus 161 ~L~~lGa~~l~~~~~~D~~~~~~~~~~~~W~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 239 (682)
T 2bpo_A 161 HLSAAGAIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDEQEAKFTSQFQYTVLNEIT-DSMSLGEPSAHYLPS 239 (682)
T ss_dssp HHHHTTCEECSCCEEEETTTTCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCSBCCEECSSCC-TTSCSSCSSGGGSTT
T ss_pred HHHHCCCeEeECcEEEecCCcccHHHHHHHHHHHHHHHHhhcCCcccccccCCcceeEecccCC-ccccccCcccccccc
Confidence 47899999999999999985 889999999999999999999875432221111111000 000 0010000000 0
Q ss_pred c-----cccccccccCCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeC-CCCCCCCCCCeeEEcccCCHHHHHHHHHHhc
Q psy15286 75 D-----SLVTGLSKVHSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRK-PHDCAYEPGDHVGIFASNKWDLVSGILARLN 148 (707)
Q Consensus 75 ~-----~~~~~~~~~~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l-~~~l~Y~pGD~l~I~P~N~~~~V~~lL~~L~ 148 (707)
. ........++.++++.|+|+.|++|++ +++|+++||+|++ +++++|+|||+|+|+|.|+++.|+++|++||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~p~~a~v~~~~~L~~--~~~~~~~hie~d~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l~ 317 (682)
T 2bpo_A 240 HQLNRNADGIQLGPFDLSQPYIAPIVKSRELFS--SNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFN 317 (682)
T ss_dssp SCCCCCTTCCBCSCCBTTBCCCEEEEEEEECCC--CSSCCEEEEEEECTTBTCCCCTTCEEEECCCCCHHHHHHHHHHHT
T ss_pred ccccccccccccCcccCCCceEEEEEEEEEccC--CCCCCEEEEEEEcCCCCceecCCCEEEEEcCCCHHHHHHHHHHhh
Confidence 0 000112345567889999999999997 6789999999998 6789999999999999999999999999999
Q ss_pred CCCCCCCCceEecccccccccccccccCCCCCCCC-cccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHHHHHHHHhhh
Q psy15286 149 LGGIDPDEPMELQVLSETHTSTEVIKSWKPHERLP-RASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLAT 227 (707)
Q Consensus 149 L~~~d~d~~i~l~~~~~~~~~~~~~~~~~~~~~~P-p~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~ek~~L~~L~s 227 (707)
| ++|+.|++....+. ...++| ++|++++|++|+||+++|++.||+.||+|++|+.+|++|++|++
T Consensus 318 l---~~d~~v~~~~~~~~-----------~~~p~p~~~tl~~~l~~~ldi~~~p~~~~l~~la~~a~~~~~k~~L~~l~~ 383 (682)
T 2bpo_A 318 L---DPETIFDLKPLDPT-----------VKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLSK 383 (682)
T ss_dssp C---CTTCEEECCBSSTT-----------CCCSSCSSEEHHHHHHHTBCCSSCCCHHHHHHHSTTCSSHHHHHHHHHHTT
T ss_pred c---cCCcEEEEecCCcc-----------cCCCCCCCccHHHHHHHhhhccCCCCHHHHHHHHHHCCCHHHHHHHHHhcc
Confidence 4 67999988754322 124678 99999999999999999999999999999999999999999999
Q ss_pred chHHHHHHhhcCCCCHHHHHhhCC----CCCCChHHHHHHhCCCCCCcccccCCCCCCCCeEEEEEEEEEeeccCC-CCC
Q psy15286 228 DSAAYEDWRHWRFPHLLEVLEQFP----SIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGA-SIH 302 (707)
Q Consensus 228 ~~~~y~~~~~~~~~slldvL~~f~----s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~~p~~i~ltvavv~y~t~~~-~~~ 302 (707)
+++.|.+|+..++++++|+|++|| ++++|+++|+..+|+++||+|||||||..+|+.++|+|++++|.++.+ .++
T Consensus 384 ~~~~~~~~~~~~~~~i~dvL~~fp~~~~s~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~ 463 (682)
T 2bpo_A 384 DKDQFAVEITSKYFNIADALKYLSDGAKWDTVPMQFLVESVPQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAP 463 (682)
T ss_dssp CHHHHHHHTGGGTCCHHHHHHHHHTTCCCTTSCHHHHHHHSCBCCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSC
T ss_pred CHHHHHHHHhcCCCCHHHHHHhccCcccccCCCHHHHHHhCcccccccccccCCcccCCCeEEEEEEEEEEecCcccCCc
Confidence 999999999999999999999999 899999999999999999999999999988999999999999998742 246
Q ss_pred ccccccccccccccccHHHHhhhCCCCCCChHHHHhccCC------------CCceeEEecCCCCCCCCcceeEEEEEee
Q psy15286 303 SDSAAYEDWRHWRFPHLLEVLEQFPSIHLPPALLVAQLTP------------LQPRFYSISSSPLAHPNEIHLTVAVVTY 370 (707)
Q Consensus 303 ~r~GlcS~~~~~~~~~~~d~l~~fps~~~~~~~lL~~L~~------------g~~~~~sIsSs~~~~p~~i~l~v~~V~~ 370 (707)
.+.|+||+| |..+.+ |+.+. |
T Consensus 464 ~~~G~~S~~-------------------------L~~l~~g~~~~~~~~~~~G~~v~--i-------------------- 496 (682)
T 2bpo_A 464 PVVGVTTNL-------------------------LRNIQLAQNNVNIAETNLPVHYD--L-------------------- 496 (682)
T ss_dssp CEECHHHHH-------------------------HHHHHHHHTTCCTTTSCCCCCCC--S--------------------
T ss_pred ccCccccHH-------------------------HHhccccccccccccccccccee--e--------------------
Confidence 789999999 655544 22221 1
Q ss_pred cccccCccCccccccccccccccccCCCCCCCCcEEEeeccCCCCCCCCCCCCCCceeeecccccCCCCCcccCCCCccc
Q psy15286 371 RTQGLSKVHSRKVWQCPLIKKWNLYGSQPVAFAPVTVQFRSDQKDSSRESDGSQPVARTTLGIQMRKPHDCAYEPGDHVG 450 (707)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~f~lp~~~~~Piim~~~~~~~~~~~~~~i~~Gt~~~ 450 (707)
. .++|. + .+..|+|++|++ .|+||.++.+|+|| ||+||
T Consensus 497 --~--GP~G~--------------f-----~~~~v~v~vr~~--~F~Lp~~~~~piIm--------------Ig~GT--- 534 (682)
T 2bpo_A 497 --N--GPRKL--------------F-----ANYKLPVHVRRS--NFRLPSNPSTPVIM--------------IGPGT--- 534 (682)
T ss_dssp --S--CGGGT--------------T-----TTTEECEEEECC--SCCCCSSTTSCEEE--------------EEEGG---
T ss_pred --c--cCcCc--------------c-----cCceEEEEEecC--cccCCCCCCCCEEE--------------EecCc---
Confidence 1 11110 0 124788999974 59999998999999 99999
Q ss_pred ccccCchhhhhhhhhhccCCCCCCCchhhhhhhccccCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhh
Q psy15286 451 IFASNKWDLVSGILARLNLGGIDPDEPMELQVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFA 530 (707)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~GiAPfr~~~~~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 530 (707)
|||||| +|+| +|. ...
T Consensus 535 --------------------GIAPfr-----------------s~lq--~r~---~~~---------------------- 550 (682)
T 2bpo_A 535 --------------------GVAPFR-----------------GFIR--ERV---AFL---------------------- 550 (682)
T ss_dssp --------------------GGHHHH-----------------HHHH--HHH---HHH----------------------
T ss_pred --------------------ChHHHH-----------------HHHH--HHH---Hhh----------------------
Confidence 999999 9999 766 310
Q ss_pred cccCCcchHHHHHHHHHhhhhhhhhhcccccCCceEEEEecCCCCCc-ccHHHHHHHH-hcCCCceEEEEEecCCCCCcc
Q psy15286 531 TFATAPDDQEILTLLATKMQNSRVIKFGLQELGKMTLFFGCQLKTMD-LYSDEKSKML-DQKVLTKSFLALSREPTIPKT 608 (707)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~LffG~R~~~~D-ly~dELe~~~-~~g~l~~l~~AfSRe~~~~k~ 608 (707)
....+ +..+...+++|||||||++ .| +|++||++|. +.|.++++++||||++++.++
T Consensus 551 ---------------~~~~~-----~~~g~~~~~~~L~fG~R~~-~D~ly~dEl~~~~~~~g~~~~l~~afSr~d~~~k~ 609 (682)
T 2bpo_A 551 ---------------ESQKK-----GGNNVSLGKHILFYGSRNT-DDFLYQDEWPEYAKKLDGSFEMVVAHSRLPNTKKV 609 (682)
T ss_dssp ---------------HTCC---------CCCCCCEEEEEEESSS-SSCTTTTTHHHHHHHHGGGEEEEEEESCCTTSCCC
T ss_pred ---------------ccccc-----ccccCCcCCEEEEEecCCh-hhhhhHHHHHHHHHhcCCceEEEEEECCCCCCCCc
Confidence 00000 0013346899999999999 68 9999999995 446666899999995434799
Q ss_pred chhhHHHhhHHHHHHHhhcCCcEEEEeCC-hhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy15286 609 YVQDLMKKEASMLYRELIKEGGHFYVCGD-CTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIF 681 (707)
Q Consensus 609 YVQd~L~~~~~~l~~~L~~~ga~iYVCGp-~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw 681 (707)
||||+|.++.+.+++++ +++++|||||| ++|+++|.++|.+++++++++++++|++|+++|+++|||++|||
T Consensus 610 yVqd~l~e~~~~l~~~l-~~~~~vYvCGpa~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~Dvw 682 (682)
T 2bpo_A 610 YVQDKLKDYEDQVFEMI-NNGAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 682 (682)
T ss_dssp CHHHHHHHTHHHHHHHH-TTTCEEEEEECSTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred chHHHHHhhHHHHHHHH-hCCcEEEEeCCchHhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEEEeC
Confidence 99999999999999988 67899999999 59999999999999999999999999999999999999999999
No 4
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=100.00 E-value=2.2e-74 Score=642.54 Aligned_cols=430 Identities=36% Similarity=0.648 Sum_probs=375.3
Q ss_pred ccCceeeeccCCCcccccccccccCCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeC-CC-CCCCCCCCeeEEcccCCHH
Q psy15286 61 LNASTVRFLPMTTADSLVTGLSKVHSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRK-PH-DCAYEPGDHVGIFASNKWD 138 (707)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l-~~-~l~Y~pGD~l~I~P~N~~~ 138 (707)
|...++|+.+.....++..+++.++.++++.|+|+.|++||+ .+++|+++||+|++ ++ +++|+|||+|+|+|.|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~~~~~l~~-~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~p~N~~~ 80 (435)
T 1f20_A 2 WKRNKFRLTYVAEAPDLTQGLSNVHKKRVSAARLLSRQNLQS-PKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHED 80 (435)
T ss_dssp CCTTSEEEEECSCCCCHHHHHHHHHTSCCEEEEEEEEEECSC-TTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHH
T ss_pred CCcCcEEEccCcCCcChhhhccccccCCcEEEEEEeEEECCC-CCCCceEEEEEEECCCCCCCcCCCCCEEEEEecCCHH
Confidence 556778888765544677777888999999999999999999 88999999999998 33 7999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCceEecccccccccccccccCCCCCCCCcccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHH
Q psy15286 139 LVSGILARLNLGGIDPDEPMELQVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDD 218 (707)
Q Consensus 139 ~V~~lL~~L~L~~~d~d~~i~l~~~~~~~~~~~~~~~~~~~~~~Pp~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~e 218 (707)
.|+++|++|++ ..++|+.|+++...+..+.++..+.|....++|++|++++|++|+||+++|++.||+.||+|++|+.+
T Consensus 81 ~V~~~l~~l~~-~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~p~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~ 159 (435)
T 1f20_A 81 LVNALIERLED-APPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKE 159 (435)
T ss_dssp HHHHHHTTBSS-CCCTTSCEEEEEEEEESSSTTCEEEEEECCSSCSBCHHHHHHHTBCCSSCCCHHHHHHHHTTBCCHHH
T ss_pred HHHHHHHHhCC-CCCCCeEEEEeccccccCCCCccccccccCCCCCccHHHHHHhceecCCCCCHHHHHHHHHHCCCHHH
Confidence 99999999984 36889999987543222112323456666788899999999999999999999999999999999999
Q ss_pred HHHHHHhhhchHHHHHHhhcCCCCHHHHHhhCCCCCCChHHHHHHhCCCCCCcccccCCCCCCCCeEEEEEEEEEeeccC
Q psy15286 219 QEILTLLATDSAAYEDWRHWRFPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQG 298 (707)
Q Consensus 219 k~~L~~L~s~~~~y~~~~~~~~~slldvL~~f~s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~~p~~i~ltvavv~y~t~~ 298 (707)
|++|++|+++.+.|.+|+...+++++|+|.+||++++|+++++..+|+++||.|||||||..+++.++|+|++++|.++.
T Consensus 160 k~~L~~l~~~~~~~~~~~~~~~~~i~~vl~~fps~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~ 239 (435)
T 1f20_A 160 KQRLLVLSKGLQEYEEWKWGKNPTMVEVLEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRD 239 (435)
T ss_dssp HHHHHHHTTCSHHHHHHHHHHCCCHHHHHHHSTTBCBCHHHHHHHSCBCCCEEEECCSCTTTSTTEEEEEEECCEEECGG
T ss_pred HHHHHHhhcCHHHHHHHHhccCCCHHHHHHhCCcCCCCHHHHHHhCCCCCCccccccCCcccCCCeEEEEEEEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999998899999999999999887
Q ss_pred CCCCccccccccccccccccHHHHhhhCCCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeecccccCcc
Q psy15286 299 ASIHSDSAAYEDWRHWRFPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKV 378 (707)
Q Consensus 299 ~~~~~r~GlcS~~~~~~~~~~~d~l~~fps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~ 378 (707)
|.++.+.|+||+| |+.+.+|+.+.+++
T Consensus 240 g~~~~~~G~~S~~-------------------------L~~l~~Gd~v~v~~---------------------------- 266 (435)
T 1f20_A 240 GEGPVHHGVCSSW-------------------------LNRIQADDVVPCFV---------------------------- 266 (435)
T ss_dssp GTSCEEECHHHHH-------------------------HTTCCTTCEEEEEE----------------------------
T ss_pred CCCcccCCccchh-------------------------HhhCCCCCEEEEEE----------------------------
Confidence 6677899999999 88787777665544
Q ss_pred CccccccccccccccccCCCCCCCCcEEEeeccCCCCCCCCCCCCCCceeeecccccCCCCCcccCCCCcccccccCchh
Q psy15286 379 HSRKVWQCPLIKKWNLYGSQPVAFAPVTVQFRSDQKDSSRESDGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWD 458 (707)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~f~lp~~~~~Piim~~~~~~~~~~~~~~i~~Gt~~~~~~~~~~~ 458 (707)
+++ +.|++|.+...|+|| ||+||
T Consensus 267 -------------------------------~~~-g~F~lp~~~~~piil--------------IagGt----------- 289 (435)
T 1f20_A 267 -------------------------------RGA-PSFHLPRNPQVPCIL--------------VGPGT----------- 289 (435)
T ss_dssp -------------------------------ECC-TTSSCCSCTTSCEEE--------------ECCGG-----------
T ss_pred -------------------------------ecC-CCccCCCCCCCCEEE--------------EECCc-----------
Confidence 221 138999888899999 99999
Q ss_pred hhhhhhhhccCCCCCCCchhhhhhhccccCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhhcccCCcch
Q psy15286 459 LVSGILARLNLGGIDPDEPMELQVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDD 538 (707)
Q Consensus 459 ~~~~~~~~~~~~GiAPfr~~~~~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 538 (707)
|||||| +|+| +|. ...
T Consensus 290 ------------GIAP~~-----------------s~l~--~~~---~~~------------------------------ 305 (435)
T 1f20_A 290 ------------GIAPFR-----------------SFWQ--QRQ---FDI------------------------------ 305 (435)
T ss_dssp ------------GGHHHH-----------------HHHH--HHH---HHH------------------------------
T ss_pred ------------CcHHHH-----------------HHHH--HHH---Hhh------------------------------
Confidence 999999 9999 665 210
Q ss_pred HHHHHHHHHhhhhhhhhhcccccCCceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCCCCccchhhHHHhh
Q psy15286 539 QEILTLLATKMQNSRVIKFGLQELGKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPTIPKTYVQDLMKKE 617 (707)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~~~k~YVQd~L~~~ 617 (707)
+..+...++++||||||+++.| +|.+||++|.+.+.+++++++|||++.+.++||||+|.++
T Consensus 306 -----------------~~~~~~~~~~~L~~G~R~~~~d~ly~~El~~~~~~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~ 368 (435)
T 1f20_A 306 -----------------QHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQ 368 (435)
T ss_dssp -----------------HHHCCCCCCEEEEEEESCTTTSCTTHHHHHHHHHTTSEEEEEEEESSCTTSCCCCHHHHHHHH
T ss_pred -----------------hhccCCCCCEEEEEeecccccchhHHHHHHHHHHcCCccEEEEEECCCCCCCCcchhhHHHhh
Confidence 0012356899999999999878 9999999999988777899999999754589999999988
Q ss_pred -HHHHHHHhhcCCcEEEEeCChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEecc
Q psy15286 618 -ASMLYRELIKEGGHFYVCGDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFGI 683 (707)
Q Consensus 618 -~~~l~~~L~~~ga~iYVCGp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~~ 683 (707)
.+.+++++.+.+++||||||++|+++|.++|.+++.+++++++++|++|+++|+++|||++||||+
T Consensus 369 l~~~~~~~l~~~~~~vYvCGp~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~RY~~Dv~~~ 435 (435)
T 1f20_A 369 LAESVYRALKEQGGHIYVCGDVTMAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNRYHEDIFGV 435 (435)
T ss_dssp SHHHHHHHHHTSCCEEEEEECHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred hHHHHHHHHhcCCcEEEEeCChhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCEEEEecCC
Confidence 788888876678999999999999999999999999999999999999999999999999999985
No 5
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=100.00 E-value=7.4e-74 Score=639.85 Aligned_cols=397 Identities=30% Similarity=0.498 Sum_probs=347.8
Q ss_pred ccccCCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeC-CCCCCCCCCCeeEEcccCCHHHHHHHHHHhcCCCCCCCCceE
Q psy15286 81 LSKVHSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRK-PHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPME 159 (707)
Q Consensus 81 ~~~~~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l-~~~l~Y~pGD~l~I~P~N~~~~V~~lL~~L~L~~~d~d~~i~ 159 (707)
.+.+..++|+.|+|+.|++||+ +++|+|+||||++ +++++|+|||+|+|||.|+++.|+++|++|| +++|+.|+
T Consensus 54 ~~~~~~~~p~~a~v~~n~~Lt~--~~~r~~~hie~dl~~s~l~Y~~GD~l~V~p~N~~~~V~~~l~~l~---~~~d~~v~ 128 (458)
T 3qfs_A 54 KPPFDAKNPFLAAVTTNRKLNQ--GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILG---ADLDVVMS 128 (458)
T ss_dssp CSCCCSSSCEEEEEEEEEECCS--SSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHHT---CCTTCEEE
T ss_pred CCCCCCCCCEEEEEEEEEEcCC--CCCCCEEEEEEEeCCCCcccCCCCEEEEEeeCCHHHHHHHHHHhC---cCCCceEE
Confidence 3456788999999999999997 4689999999999 6789999999999999999999999999999 58999998
Q ss_pred ecccccccccccccccCCCCCCCC-cccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHHHHHHHHhhh----chHHHHH
Q psy15286 160 LQVLSETHTSTEVIKSWKPHERLP-RASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLAT----DSAAYED 234 (707)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~P-p~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~ek~~L~~L~s----~~~~y~~ 234 (707)
+....+.. ....++| |+|++++|++|+||+++|+++||+.||+|++|+.+|++|++|++ +++.|.+
T Consensus 129 ~~~~~~~~---------~~~~p~~~~~tl~~~l~~~~di~~~p~~~~l~~la~~a~~~~ek~~L~~l~~~~~~~~~~~~~ 199 (458)
T 3qfs_A 129 LNNLDEES---------NKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLS 199 (458)
T ss_dssp EEESSTTC---------SCCCSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHHHHSCSHHHHHHHHH
T ss_pred ecCCCccc---------ccCCCCCCCeeHHHHHHhcEeccCCCCHHHHHHHHHHcCCHHHHHHHHHHhccCcccHHHHHH
Confidence 87543221 1234677 89999999999999999999999999999999999999999986 4568999
Q ss_pred HhhcCCCCHHHHHhhCCCCCCChHHHHHHhCCCCCCcccccCCCCCCCCeEEEEEEEEEeeccCCCCCcccccccccccc
Q psy15286 235 WRHWRFPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGASIHSDSAAYEDWRHW 314 (707)
Q Consensus 235 ~~~~~~~slldvL~~f~s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~~p~~i~ltvavv~y~t~~~~~~~r~GlcS~~~~~ 314 (707)
|+..++++++|+|++||++++|++.|++.+|+++||+|||||||..+++.++|+|++|+|.+.. ++.+.|+||+|
T Consensus 200 ~~~~~~~~ildvL~~fps~~~p~~~ll~~lp~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~--~r~~~G~~S~~--- 274 (458)
T 3qfs_A 200 WVVEARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKA--GRINKGVATNW--- 274 (458)
T ss_dssp HTTTTTCCHHHHHHHSTTBCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTT--SCEEECHHHHH---
T ss_pred HHhhcCCCHHHHHHhCCccCCCHHHHHhhCCCCcceeEeeccCcccCCCEEEEEEEEEEecCCC--CCCCCCchhHH---
Confidence 9999999999999999999999999999999999999999999999999999999999999876 57899999999
Q ss_pred ccccHHHHhhhCCCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeecccccCccCccccccccccccccc
Q psy15286 315 RFPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKVHSRKVWQCPLIKKWNL 394 (707)
Q Consensus 315 ~~~~~~d~l~~fps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (707)
|+.+.++... +
T Consensus 275 ----------------------L~~l~~gg~~---------------------------~-------------------- 285 (458)
T 3qfs_A 275 ----------------------LRAKEPVGEN---------------------------G-------------------- 285 (458)
T ss_dssp ----------------------HHTCCSSCSS---------------------------C--------------------
T ss_pred ----------------------HHhhccCCcc---------------------------C--------------------
Confidence 7766543210 0
Q ss_pred cCCCCCCCCcEEEeeccCCCCCCCCCCCCCCceeeecccccCCCCCcccCCCCcccccccCchhhhhhhhhhccCCCCCC
Q psy15286 395 YGSQPVAFAPVTVQFRSDQKDSSRESDGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDP 474 (707)
Q Consensus 395 ~~~~~~~~~~~~~~~r~~~~~f~lp~~~~~Piim~~~~~~~~~~~~~~i~~Gt~~~~~~~~~~~~~~~~~~~~~~~GiAP 474 (707)
....|.|+++.+ .|++|.++.+|+|| ||+|| ||||
T Consensus 286 ------~~~~v~v~~p~g--~F~lp~~~~~piIm--------------IggGT-----------------------GIAP 320 (458)
T 3qfs_A 286 ------GRALVPMFVRKS--QFRLPFKATTPVIM--------------VGPGT-----------------------GVAP 320 (458)
T ss_dssp ------CCCEEEEEEECC--SCCCCSSTTSCEEE--------------ECCGG-----------------------GGHH
T ss_pred ------CceEEEEEecCC--CcccCCCCCCceEE--------------EcCCc-----------------------chhh
Confidence 001345555543 48999988999999 99999 9999
Q ss_pred CchhhhhhhccccCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhhcccCCcchHHHHHHHHHhhhhhhh
Q psy15286 475 DEPMELQVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATKMQNSRV 554 (707)
Q Consensus 475 fr~~~~~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (707)
|| +|+| +|. .+.
T Consensus 321 fr-----------------s~lq--~r~---~l~---------------------------------------------- 332 (458)
T 3qfs_A 321 FI-----------------GFIQ--ERA---WLR---------------------------------------------- 332 (458)
T ss_dssp HH-----------------HHHH--HHH---HHH----------------------------------------------
T ss_pred HH-----------------HHHH--HHH---HHH----------------------------------------------
Confidence 99 9999 765 321
Q ss_pred hhcccccCCceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCCCCccchhhHHHhhHHHHHHHhhcCCcEEE
Q psy15286 555 IKFGLQELGKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPTIPKTYVQDLMKKEASMLYRELIKEGGHFY 633 (707)
Q Consensus 555 ~~~~~~~~g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~~~k~YVQd~L~~~~~~l~~~L~~~ga~iY 633 (707)
..+...++++||||||++..| +|++||++|.+.|.++++++||||+++ .++||||+|.++.+.||+++ +++++||
T Consensus 333 --~~g~~~~~~~Lf~G~R~~~~D~ly~dEl~~l~~~g~l~~l~~a~SRd~~-~k~yVqd~l~~~~~~l~~~l-~~~~~vY 408 (458)
T 3qfs_A 333 --QQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQS-HKVYVQHLLKQDREHLWKLI-EGGAHIY 408 (458)
T ss_dssp --HHTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHHTSSSEEEEEETTSSS-SCCCHHHHHHHTHHHHHHHH-HTTCEEE
T ss_pred --hcCCCCCCEEEEEEeCCchHhhhHHHHHHHHHHcCCCCEEEEEEECCCC-CcccHhHHHHHhHHHHHHHh-cCCCEEE
Confidence 113345899999999998668 999999999998887789999999975 79999999999999999988 7899999
Q ss_pred EeCCh-hhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEec
Q psy15286 634 VCGDC-TMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFG 682 (707)
Q Consensus 634 VCGp~-~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~ 682 (707)
||||+ .|+++|+++|.+|+++++++++++|++|+++|+++|||++|||+
T Consensus 409 vCGp~~~M~~~V~~~L~~i~~~~g~~~~~~A~~~~~~l~~~~RY~~Dvws 458 (458)
T 3qfs_A 409 VCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVWS 458 (458)
T ss_dssp EEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEEC
T ss_pred EECCCHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCeEEEecC
Confidence 99997 79999999999999999999999999999999999999999996
No 6
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=100.00 E-value=7.1e-72 Score=635.95 Aligned_cols=411 Identities=28% Similarity=0.458 Sum_probs=347.2
Q ss_pred cccCCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeC-CCCCCCCCCCeeEEcccCCHHHHHHHHHHhcCCCCCCCCceEe
Q psy15286 82 SKVHSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRK-PHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMEL 160 (707)
Q Consensus 82 ~~~~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l-~~~l~Y~pGD~l~I~P~N~~~~V~~lL~~L~L~~~d~d~~i~l 160 (707)
..+..++++.|+|+.|++||+ .+++|+|+||+|++ +++++|+|||+|+|+|.|+++.|+++|++|||. .+.+..|.+
T Consensus 107 ~~~~~~~~~~a~v~~~~~Lt~-~~~~r~v~hield~~~~~l~Y~~GD~l~V~P~N~~~~V~~~l~~lgl~-~~~~~~v~~ 184 (539)
T 2qtl_A 107 SVTSADPVFQVPISKAVQLTT-NDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLE-DKREHCVLL 184 (539)
T ss_dssp ------CCEEEEEEEEEECSC-TTCSSCEEEEEEECTTSCCCCCTTCEEEEECCCCHHHHHHHHHHTTCG-GGTTSEEEE
T ss_pred CCCCCCCCEEEEEEeeEEcCC-CCCCCcEEEEEEecCCCCcCcCCCCEEEEEeCCCHHHHHHHHHHhCCC-ccCCeEEEE
Confidence 345678899999999999999 89999999999998 567899999999999999999999999999963 456777887
Q ss_pred cccccccccccccccCCCCCCCC-cccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHHHHHHHHhhh--chHHHHHHhh
Q psy15286 161 QVLSETHTSTEVIKSWKPHERLP-RASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLAT--DSAAYEDWRH 237 (707)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~P-p~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~ek~~L~~L~s--~~~~y~~~~~ 237 (707)
...++... ..+..+.++| ++|++++|++|+||+++|++.||+.||+||+|+.+|++|.+|++ +.+.|.+|+.
T Consensus 185 ~~~~~~~~-----~~~~~p~~~p~~~tl~~~L~~~lDi~~~p~~~~l~~la~~a~d~~ek~~L~~l~s~~~~~~~~~~~~ 259 (539)
T 2qtl_A 185 KIKADTKK-----KGATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVR 259 (539)
T ss_dssp EECTTCCC-----TTCCCCTTSCTTCBHHHHHHHTBCTTSCCCHHHHHHHHTTBCSHHHHHHHHHHHSSTTHHHHHHHTT
T ss_pred eccccccC-----CCccCCCCCCCcccHHHHHHHHhhhcCCCCHHHHHHHHHHcCCHHHHHHHHHHhChhhHHHHHHHHh
Confidence 65433211 1123345677 99999999999999999999999999999999999999999996 6788999999
Q ss_pred cCCCCHHHHHhhCCCCCCChHHHHHHhCCCCCCcccccCCCCCCCCeEEEEEEEEEeeccCCCCCccccccccccccccc
Q psy15286 238 WRFPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGASIHSDSAAYEDWRHWRFP 317 (707)
Q Consensus 238 ~~~~slldvL~~f~s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~~p~~i~ltvavv~y~t~~~~~~~r~GlcS~~~~~~~~ 317 (707)
..+++++|+|++||++++|+++|++.+|+++||+|||||||..+++.++|+|++|+|.+..+.++.+.|+||+|
T Consensus 260 ~~~~~lldvL~~fps~~~p~~~ll~~lp~l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~------ 333 (539)
T 2qtl_A 260 DACACLLDLLLAFPSCQPPLSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGW------ 333 (539)
T ss_dssp TTTCCHHHHHHHSTTBCCCHHHHHHHSCBCCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHH------
T ss_pred hcCCCHHHHHHhCCCcCCCHHHHHHhCcCCcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhH------
Confidence 99999999999999999999999999999999999999999888999999999999987766677899999999
Q ss_pred cHHHHhhhCCCCCCChHHHHhcc-----------CCCCceeEEecCCCCCCCCcceeEEEEEeecccccCccCccccccc
Q psy15286 318 HLLEVLEQFPSIHLPPALLVAQL-----------TPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKVHSRKVWQC 386 (707)
Q Consensus 318 ~~~d~l~~fps~~~~~~~lL~~L-----------~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~~~~~~~~~ 386 (707)
|..+ ++|+...
T Consensus 334 -------------------L~~l~~~~~~~~~~~~~Gd~~~--------------------------------------- 355 (539)
T 2qtl_A 334 -------------------LALLVASVLQPNIHASHEDSGK--------------------------------------- 355 (539)
T ss_dssp -------------------HHHHTTTTC----------------------------------------------------
T ss_pred -------------------HHHhhhhhccccccCCCCCccc---------------------------------------
Confidence 6554 2222000
Q ss_pred cccccccccCCCCCCCCcEEEeeccCCCCCCCCCCCCCCceeeecccccCCCCCcccCCCCcccccccCchhhhhhhhhh
Q psy15286 387 PLIKKWNLYGSQPVAFAPVTVQFRSDQKDSSRESDGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILAR 466 (707)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~f~lp~~~~~Piim~~~~~~~~~~~~~~i~~Gt~~~~~~~~~~~~~~~~~~~ 466 (707)
.....|.|+++.+. .|++|.++.+|+|| ||+||
T Consensus 356 -------------~~~~~V~v~~p~g~-~F~Lp~~~~~piIm--------------Ig~GT------------------- 388 (539)
T 2qtl_A 356 -------------ALAPKISIFPRTTN-SFHLPDDPSIPIIM--------------VGPGT------------------- 388 (539)
T ss_dssp --------------CCCEEEEEECSCC-CCCCCSSTTSCEEE--------------ECCGG-------------------
T ss_pred -------------cCceEEEEEeeeCC-CccCCccCCCCEEE--------------EEcCc-------------------
Confidence 00115667776542 49999988999999 99999
Q ss_pred ccCCCCCCCchhhhhhhccccCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhhcccCCcchHHHHHHHH
Q psy15286 467 LNLGGIDPDEPMELQVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLA 546 (707)
Q Consensus 467 ~~~~GiAPfr~~~~~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (707)
|||||| +|+| +|. .+.
T Consensus 389 ----GIAPfr-----------------sflq--~r~---~~~-------------------------------------- 404 (539)
T 2qtl_A 389 ----GIAPFI-----------------GFLQ--HRE---KLQ-------------------------------------- 404 (539)
T ss_dssp ----GGHHHH-----------------HHHH--HHH---HHH--------------------------------------
T ss_pred ----cHHHHH-----------------HHHH--HHH---HHH--------------------------------------
Confidence 999999 9999 776 321
Q ss_pred HhhhhhhhhhcccccCCceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCC-----CCccchhhHHHhhHHH
Q psy15286 547 TKMQNSRVIKFGLQELGKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPT-----IPKTYVQDLMKKEASM 620 (707)
Q Consensus 547 ~~~~~~~~~~~~~~~~g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~-----~~k~YVQd~L~~~~~~ 620 (707)
. ...+...+++|||||||+++.| +|++||++|.+.|.++++++||||++. +.++||||+|.++.+.
T Consensus 405 ~--------~~~~~~~~~v~LffG~R~~~~D~ly~dEL~~~~~~g~~~~l~~afSRd~~~~~~~g~k~yVqd~l~e~~~~ 476 (539)
T 2qtl_A 405 E--------QHPDGNFGAMWLFFGCRHKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQ 476 (539)
T ss_dssp H--------HCTTCCCCCEEEEEEESCTTTCCTTHHHHHHHHHTTSSCEEEEEESSSCC------CCCSHHHHHHHTHHH
T ss_pred h--------ccccCCCCCEEEEEEECCcchhhHHHHHHHHHHHhCCCcEEEEEEccCCCccccCCCccchhHHHHHhHHH
Confidence 0 0011246899999999999768 999999999998877799999999874 2689999999999999
Q ss_pred HHHHhhcCCcEEEEeCCh-hhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEec
Q psy15286 621 LYRELIKEGGHFYVCGDC-TMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFG 682 (707)
Q Consensus 621 l~~~L~~~ga~iYVCGp~-~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~ 682 (707)
+|+++.+.+++||||||+ +|+++|.++|.+++++++++++++|++|+++|+++|||++|||+
T Consensus 477 l~~~l~~~~a~vYVCGp~~~M~~~V~~~L~~i~~~~~~~~~~~A~~~l~~l~~~~RY~~Dvw~ 539 (539)
T 2qtl_A 477 VARILLQENGHIYVCGDAKNMAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIWS 539 (539)
T ss_dssp HHHHHHHSCCEEEEEESCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC-
T ss_pred HHHhhccCCcEEEEECCCHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCcEEEEcCC
Confidence 999885678999999998 99999999999999999999999999999999999999999996
No 7
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=100.00 E-value=7.7e-72 Score=614.19 Aligned_cols=385 Identities=27% Similarity=0.445 Sum_probs=336.4
Q ss_pred CcEEEEEeEEeeccCCCCCCCcEEEEEeeCCCCCCCCCCCeeEEcccCCHHHHHHHHHHhcCCCCCCCCceEeccccccc
Q psy15286 88 KVWQCPLIKKWNLYGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMELQVLSETH 167 (707)
Q Consensus 88 ~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~~l~Y~pGD~l~I~P~N~~~~V~~lL~~L~L~~~d~d~~i~l~~~~~~~ 167 (707)
+++.|+|++|++||+ .+++|+++||||+++++++|+|||+|+|+|.|+++.|+++|++|| +++|+.|++......
T Consensus 5 ~~~~a~v~~n~~Lt~-~~~~~~~~hie~~l~~~~~Y~~GD~l~v~p~N~~~~V~~~l~~l~---l~~~~~v~~~~~~~~- 79 (393)
T 4dql_A 5 GAFSTNVVASKELQQ-PGSARSTRHLEIELPKEASYQEGDHLGVIPRNYEGIVNRVTARFG---LDASQQIRLEAEEEK- 79 (393)
T ss_dssp CCEEEEEEEEEECSC-TTCSCCEEEEEEECCTTCCCCTTCEEEECCCCCHHHHHHHHHHHT---CCTTCEECCCC-----
T ss_pred CcEEEEEEeEEEcCC-CCCCceEEEEEEECCCCCccCCCCEEEEEccCCHHHHHHHHHHhC---cCCCCeEEEeCCCCc-
Confidence 468899999999999 899999999999998899999999999999999999999999999 478888876532111
Q ss_pred ccccccccCCCCCCCC-cccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHHHHHHHHhhhchHHHHHHhhcCCCCHHHH
Q psy15286 168 TSTEVIKSWKPHERLP-RASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATDSAAYEDWRHWRFPHLLEV 246 (707)
Q Consensus 168 ~~~~~~~~~~~~~~~P-p~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~ek~~L~~L~s~~~~y~~~~~~~~~slldv 246 (707)
....+++ |+|++++|++ +||+++|+++||+.||+|++|+.+|++|++|+++. .|.+|+..++++++|+
T Consensus 80 ---------~~~~p~~~~~tl~~~l~~-~di~~~~~~~~l~~la~~~~~~~~~~~L~~l~~~~-~~~~~~~~~~~~~ldv 148 (393)
T 4dql_A 80 ---------LAHLPLAKTVSVEELLQY-VELQDPVTRTQLRAMAAKTVCPPHKVELEALLEKQ-AYKEQVLAKRLTMLEL 148 (393)
T ss_dssp ----------------CCEEHHHHTTS-BCSSSBCCHHHHHHHHHTCCSHHHHHHHHHTTSHH-HHHHHTTTTTCBHHHH
T ss_pred ---------cccCCCCCcEEHHHHHHh-ccccCCCCHHHHHHHHHhCCCHHHHHHHHHHhCch-HHHHHHhccCCCHHHH
Confidence 0112345 8999999999 99999999999999999999999999999998864 7899998888999999
Q ss_pred HhhCCCCCCChHHHHHHhCCCCCCcccccCCCCCCCCeEEEEEEEEEeeccCCCCCccccccccccccccccHHHHhhhC
Q psy15286 247 LEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGASIHSDSAAYEDWRHWRFPHLLEVLEQF 326 (707)
Q Consensus 247 L~~f~s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~~p~~i~ltvavv~y~t~~~~~~~r~GlcS~~~~~~~~~~~d~l~~f 326 (707)
|++||++++|++.|++++|+++||.|||||||..+++.++|+|+++++.+..|.+ .+.|+||+|
T Consensus 149 L~~fps~~~p~~~~l~~lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~-~~~G~~S~~--------------- 212 (393)
T 4dql_A 149 LEKYPACEMKFSEFIALLPSIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYG-EYKGIASNY--------------- 212 (393)
T ss_dssp HHHCTTCCCCHHHHHHTSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSS-EEECHHHHH---------------
T ss_pred HHhCCCCCCCHHHHHHhCCCCcceeeeccccccccCceEEEEEEEEecccCCCCc-ccCCccchh---------------
Confidence 9999999999999999999999999999999999899999999999998876532 578999999
Q ss_pred CCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeecccccCccCccccccccccccccccCCCCCCCCcEE
Q psy15286 327 PSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKVHSRKVWQCPLIKKWNLYGSQPVAFAPVT 406 (707)
Q Consensus 327 ps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (707)
|+.+.+|+.+.++| ++
T Consensus 213 ----------L~~l~~Gd~v~v~v----------------------~~-------------------------------- 228 (393)
T 4dql_A 213 ----------LAELQEGDTITCFI----------------------ST-------------------------------- 228 (393)
T ss_dssp ----------HHHCCTTCEEEEEE----------------------EC--------------------------------
T ss_pred ----------HHhCCCcCEEEEEE----------------------Ec--------------------------------
Confidence 88888887776665 11
Q ss_pred EeeccCCCCCCCCCCCCCCceeeecccccCCCCCcccCCCCcccccccCchhhhhhhhhhccCCCCCCCchhhhhhhccc
Q psy15286 407 VQFRSDQKDSSRESDGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMELQVLSET 486 (707)
Q Consensus 407 ~~~r~~~~~f~lp~~~~~Piim~~~~~~~~~~~~~~i~~Gt~~~~~~~~~~~~~~~~~~~~~~~GiAPfr~~~~~~~~~~ 486 (707)
..+.|++|.++.+|+|| ||+|| ||||||
T Consensus 229 -----P~g~F~lp~~~~~piIm--------------Ig~Gt-----------------------GIAPf~---------- 256 (393)
T 4dql_A 229 -----PQSEFTLPKDPETPLIM--------------VGPGT-----------------------GVAPFR---------- 256 (393)
T ss_dssp -----CSSCCCCCSSTTSCEEE--------------ECCGG-----------------------GGHHHH----------
T ss_pred -----CCCCcccCccCCCCeEE--------------EccCc-----------------------eechHH----------
Confidence 11248999888999999 99999 999999
Q ss_pred cCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhhcccCCcchHHHHHHHHHhhhhhhhhhcccccCCceE
Q psy15286 487 HTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATKMQNSRVIKFGLQELGKMT 566 (707)
Q Consensus 487 ~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~ 566 (707)
+|+| +|. .+. ..+...++++
T Consensus 257 -------s~l~--~r~---~~~------------------------------------------------~~g~~~~~v~ 276 (393)
T 4dql_A 257 -------GFVQ--ARK---QLK------------------------------------------------EQGQSLGEAH 276 (393)
T ss_dssp -------HHHH--HHH---HHH------------------------------------------------HTTCCCCCEE
T ss_pred -------HHHH--HHH---HHH------------------------------------------------hcCCCCCCEE
Confidence 9999 765 321 1234568999
Q ss_pred EEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCCCCccchhhHHHhhHHHHHHHhhcCCcEEEEeCCh-hhHHHH
Q psy15286 567 LFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPTIPKTYVQDLMKKEASMLYRELIKEGGHFYVCGDC-TMAEHV 644 (707)
Q Consensus 567 LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~~~k~YVQd~L~~~~~~l~~~L~~~ga~iYVCGp~-~M~~~V 644 (707)
||||||++..| +|.+||+++.+.|.+ ++++||||++...++||||+++++.+.+++++ +++++||||||+ .|.++|
T Consensus 277 L~~G~R~~~~d~ly~~el~~~~~~~~l-~l~~a~Sr~~~~~k~yVq~~l~~~~~~l~~~l-~~~~~vYvCGp~~~M~~~V 354 (393)
T 4dql_A 277 LYFGCRSPHEDYLYQEELENAQSEGII-TLHTAFSRMPNQPKTYVQHVMEQDGKKLIELL-DQGAHFYICGDGSQMAPAV 354 (393)
T ss_dssp EEEEESCTTTCCTTHHHHHHHHHTTSC-EEEEEESSCTTSCCCCHHHHHHHTHHHHHHHH-HTTCEEEEEEETTTHHHHH
T ss_pred EEEEECCcchhhHHHHHHHHHHhCCCe-EEEEEEeCCCCCCCcchhhHHHhCHHHHHHHH-hCCcEEEEECCchhhHHHH
Confidence 99999997668 999999999988888 79999999654579999999999999999977 678999999996 688899
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEec
Q psy15286 645 YQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFG 682 (707)
Q Consensus 645 ~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~ 682 (707)
+++|.+++++++|+++++|++|+++|+++|||++|||+
T Consensus 355 ~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dv~s 392 (393)
T 4dql_A 355 EATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVWA 392 (393)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 99999999999999999999999999999999999996
No 8
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=100.00 E-value=2.7e-66 Score=566.88 Aligned_cols=366 Identities=28% Similarity=0.427 Sum_probs=327.4
Q ss_pred ccCCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeC-CCCCCCCCCCeeEEcccCCHHHHHHHHHHhcCCCCCCCCceEec
Q psy15286 83 KVHSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRK-PHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMELQ 161 (707)
Q Consensus 83 ~~~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l-~~~l~Y~pGD~l~I~P~N~~~~V~~lL~~L~L~~~d~d~~i~l~ 161 (707)
.++.++++.|+|++|++||+ .+++|+++||+|++ +++++|+|||+|+|+|.|+++.|+++|++|| +++|+.|++.
T Consensus 5 ~~~~~~~~~a~v~~~~~lt~-~~~~~~~~hi~~~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~---~~~~~~v~~~ 80 (374)
T 1ddg_A 5 PYSKDAPLVASLSVNQKITG-RNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLW---LKGDEPVTVE 80 (374)
T ss_dssp CCBTTBCEEEEEEEEEECSC-TTCSSEEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTT---CCSCSEEEET
T ss_pred CCCCCCCEEEEEEEEEEeCC-CCCCceEEEEEEEcCCCCcccCCCCEEEEEcCCCHHHHHHHHHHhC---CCCCceEEEC
Confidence 45678899999999999999 89999999999998 6789999999999999999999999999999 4788888764
Q ss_pred ccccccccccccccCCCCCCCCcccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHHHHHHHHhhhchHHHHHHhhcCCC
Q psy15286 162 VLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATDSAAYEDWRHWRFP 241 (707)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~Pp~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~ek~~L~~L~s~~~~y~~~~~~~~~ 241 (707)
. .++|++++|++|+||+ +|+++||+.||+|++|+. |.+|+++++.|.+|+. ++
T Consensus 81 ~--------------------~~~tl~~~l~~~~di~-~p~~~~l~~la~~~~~~~----L~~l~~~~~~~~~~~~--~~ 133 (374)
T 1ddg_A 81 G--------------------KTLPLNEALQWHFELT-VNTANIVENYATLTRSET----LLPLVGDKAKLQHYAA--TT 133 (374)
T ss_dssp T--------------------EEEEHHHHHHHHBCCS-CCCHHHHHHHHHHHTCTT----TGGGTTCTHHHHHHHH--HS
T ss_pred C--------------------CCccHHHHHHhcccCC-CCCHHHHHHHHHHCCCHH----HHHHhcChHHHHHHHc--CC
Confidence 1 1789999999999999 889999999999999974 8889888888999986 47
Q ss_pred CHHHHHhhCCCCCCChHHHHHHhCCCCCCcccccCCCCCCCCeEEEEEEEEEeeccCCCCCccccccccccccccccHHH
Q psy15286 242 HLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGASIHSDSAAYEDWRHWRFPHLLE 321 (707)
Q Consensus 242 slldvL~~f~s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~~p~~i~ltvavv~y~t~~~~~~~r~GlcS~~~~~~~~~~~d 321 (707)
+++|+|.+||+ ++++..++.++++++||.|||||||..+++.++|+|++++|.+. ++.+.|+||+|
T Consensus 134 ~~~~vl~~~p~-~~~~Gq~v~l~~~~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~---~~~~~G~~S~~---------- 199 (374)
T 1ddg_A 134 PIVDMVRFSPA-QLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVE---GRARAGGASSF---------- 199 (374)
T ss_dssp CHHHHHHHSCC-CCCHHHHHHHSCBCCCEEEEBCCCTTTSCSEEEEEEEECEEEET---TEEEECHHHHH----------
T ss_pred CHHHHHHHCCC-CCCHHHHHhhccCCCCccceecCCCCCCCCEEEEEEEEEEeecC---CCCCCCCchHH----------
Confidence 99999999998 99999999999999999999999998889999999999999986 56789999999
Q ss_pred HhhhCCCCCCChHHHHhc-cCCCCceeEEecCCCCCCCCcceeEEEEEeecccccCccCccccccccccccccccCCCCC
Q psy15286 322 VLEQFPSIHLPPALLVAQ-LTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKVHSRKVWQCPLIKKWNLYGSQPV 400 (707)
Q Consensus 322 ~l~~fps~~~~~~~lL~~-L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (707)
|.. +++|+.+.+++
T Consensus 200 ---------------L~~~l~~Gd~v~v~~-------------------------------------------------- 214 (374)
T 1ddg_A 200 ---------------LADRVEEEGEVRVFI-------------------------------------------------- 214 (374)
T ss_dssp ---------------HHHSCCSSCEEEEEE--------------------------------------------------
T ss_pred ---------------HHhcCCCCCEEEEEE--------------------------------------------------
Confidence 766 88887765554
Q ss_pred CCCcEEEeeccCCCCCCCCCCCCCCceeeecccccCCCCCcccCCCCcccccccCchhhhhhhhhhccCCCCCCCchhhh
Q psy15286 401 AFAPVTVQFRSDQKDSSRESDGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMEL 480 (707)
Q Consensus 401 ~~~~~~~~~r~~~~~f~lp~~~~~Piim~~~~~~~~~~~~~~i~~Gt~~~~~~~~~~~~~~~~~~~~~~~GiAPfr~~~~ 480 (707)
+++ +.|++|.++..|+|| ||+|| ||||||
T Consensus 215 ---------~~~-g~F~lp~~~~~piim--------------Ia~Gt-----------------------GIAP~~---- 243 (374)
T 1ddg_A 215 ---------EHN-DNFRLPANPETPVIM--------------IGPGT-----------------------GIAPFR---- 243 (374)
T ss_dssp ---------ECC-TTSCCCSSTTSCEEE--------------ECCGG-----------------------GGHHHH----
T ss_pred ---------eeC-CCccCCCCCCCCEEE--------------EECCc-----------------------cHHHHH----
Confidence 111 138899888899999 99999 999999
Q ss_pred hhhccccCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhhcccCCcchHHHHHHHHHhhhhhhhhhcccc
Q psy15286 481 QVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATKMQNSRVIKFGLQ 560 (707)
Q Consensus 481 ~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (707)
+|+| +|. . .+
T Consensus 244 -------------s~l~--~~~---~----------------------------------------------------~~ 253 (374)
T 1ddg_A 244 -------------AFMQ--QRA---A----------------------------------------------------DE 253 (374)
T ss_dssp -------------HHHH--HHH---H----------------------------------------------------HT
T ss_pred -------------HHHH--HHH---h----------------------------------------------------cC
Confidence 9999 655 2 11
Q ss_pred cCCceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCCCCccchhhHHHhhHHHHHHHhhcCCcEEEEeC-Ch
Q psy15286 561 ELGKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPTIPKTYVQDLMKKEASMLYRELIKEGGHFYVCG-DC 638 (707)
Q Consensus 561 ~~g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~~~k~YVQd~L~~~~~~l~~~L~~~ga~iYVCG-p~ 638 (707)
..++++||||||+++.| +|.+||+++.+.+.++++++||||++. .++||||+|.++.+.+++++ +++++||||| |+
T Consensus 254 ~~~~~~L~~G~R~~~~d~ly~~El~~~~~~~~~~~l~~a~Srd~~-~k~yVq~~l~~~~~~l~~~l-~~~~~vYvCG~p~ 331 (374)
T 1ddg_A 254 APGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQK-EKVYVQDKLREQGAELWRWI-NDGAHIYVCGDAN 331 (374)
T ss_dssp CCSCEEEEEEESCHHHHCTTHHHHHHHHHTTSCCEEEEEETTSSS-SCCCHHHHHHHTHHHHHHHH-HTTCEEEEEECTT
T ss_pred CCCCEEEEEEeCCchhhhhHHHHHHHHHHhCCCcEEEEEEecCCC-CCccHHHHHHHhHHHHHHHH-hCCcEEEEECCCH
Confidence 34789999999998557 999999999998877789999999975 68999999999988999887 5689999999 67
Q ss_pred hhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy15286 639 TMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIF 681 (707)
Q Consensus 639 ~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw 681 (707)
+|+++|.++|.+++++++++++++|++|+++|+++|||++|||
T Consensus 332 ~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dv~ 374 (374)
T 1ddg_A 332 RMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 374 (374)
T ss_dssp THHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCeEEecC
Confidence 9999999999999999999999999999999999999999999
No 9
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=99.97 E-value=4.2e-31 Score=281.27 Aligned_cols=274 Identities=20% Similarity=0.276 Sum_probs=213.2
Q ss_pred CCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeCCCCCCCCCCCeeEEcccCCHHHHHHHHHHhcCCCCCCCCceEecccc
Q psy15286 85 HSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMELQVLS 164 (707)
Q Consensus 85 ~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~~l~Y~pGD~l~I~P~N~~~~V~~lL~~L~L~~~d~d~~i~l~~~~ 164 (707)
.++.++.++|++++++++ .++.+++++++|+.+..+.|+||+++.|.+.|..
T Consensus 33 ~~~~~~~~~V~~~~~lt~-~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~--------------------------- 84 (314)
T 1fnb_A 33 KPKTPYVGRCLLNTKITG-DDAPGETWHMVFSHEGEIPYREGQSVGVIPDGED--------------------------- 84 (314)
T ss_dssp BTTBCEEEEEEEEEECSC-SSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBC---------------------------
T ss_pred CCCCCEEEEEEEEEEecC-CCCCCcEEEEEEecCCCCCcCCCCEEEEecCCCC---------------------------
Confidence 456678999999999998 7888999999999866689999999999876410
Q ss_pred cccccccccccCCCCCCCCcccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHHHHHHHHhhhchHHHHHHhhcCCCCHH
Q psy15286 165 ETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATDSAAYEDWRHWRFPHLL 244 (707)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~Pp~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~ek~~L~~L~s~~~~y~~~~~~~~~sll 244 (707)
.+ +
T Consensus 85 ~~----g------------------------------------------------------------------------- 87 (314)
T 1fnb_A 85 KN----G------------------------------------------------------------------------- 87 (314)
T ss_dssp TT----S-------------------------------------------------------------------------
T ss_pred cC----C-------------------------------------------------------------------------
Confidence 00 0
Q ss_pred HHHhhCCCCCCChHHHHHHhCCCCCCcccccCCCCC---CCCeEEEEEEEEEeeccCCCCCccccccccccccccccHHH
Q psy15286 245 EVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLA---HPNEIHLTVAVVTYRTQGASIHSDSAAYEDWRHWRFPHLLE 321 (707)
Q Consensus 245 dvL~~f~s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~---~p~~i~ltvavv~y~t~~~~~~~r~GlcS~~~~~~~~~~~d 321 (707)
.++.+|.|||+|+|.. .++.++|+|..+.|.+.. ++.+.|.||+|
T Consensus 88 --------------------~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~~y~~~~--g~~~~G~~S~~---------- 135 (314)
T 1fnb_A 88 --------------------KPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDA--GETIKGVCSNF---------- 135 (314)
T ss_dssp --------------------SBCCCEEEECCSCSSCTTSSSCEEEEEEECCEEECTT--SCEEECHHHHH----------
T ss_pred --------------------CcCCceeEecCCCCcccCCCCCEEEEEEEEEEeccCC--CCcCCCchhhH----------
Confidence 0136799999999864 468999999999998765 44678999999
Q ss_pred HhhhCCCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeecccccCccCccccccccccccccccCCCCCC
Q psy15286 322 VLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKVHSRKVWQCPLIKKWNLYGSQPVA 401 (707)
Q Consensus 322 ~l~~fps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (707)
|..+.+|+.+.+.. ....
T Consensus 136 ---------------L~~l~~Gd~v~v~g-----------------------P~G~------------------------ 153 (314)
T 1fnb_A 136 ---------------LCDLKPGAEVKLTG-----------------------PVGK------------------------ 153 (314)
T ss_dssp ---------------HHHCCTTCEEEEEE-----------------------EECS------------------------
T ss_pred ---------------hhcCCCCCEEEEEe-----------------------ccCC------------------------
Confidence 88888888765443 0111
Q ss_pred CCcEEEeeccCCCCCCCCCCCCCCceeeecccccCCCCCcccCCCCcccccccCchhhhhhhhhhccCCCCCCCchhhhh
Q psy15286 402 FAPVTVQFRSDQKDSSRESDGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMELQ 481 (707)
Q Consensus 402 ~~~~~~~~r~~~~~f~lp~~~~~Piim~~~~~~~~~~~~~~i~~Gt~~~~~~~~~~~~~~~~~~~~~~~GiAPfr~~~~~ 481 (707)
.|.+|.+...|+|| ||.|| |||||+
T Consensus 154 -------------~~~~~~~~~~~~vl--------------IagGt-----------------------GIaP~~----- 178 (314)
T 1fnb_A 154 -------------EMLMPKDPNATIIM--------------LGTGT-----------------------GIAPFR----- 178 (314)
T ss_dssp -------------TTCCBSCTTCEEEE--------------EEEGG-----------------------GGHHHH-----
T ss_pred -------------ceeCCCCCCCCEEE--------------EeCCc-----------------------cHHHHH-----
Confidence 13556555789999 99999 999999
Q ss_pred hhccccCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhhcccCCcchHHHHHHHHHhhhhhhhhhccccc
Q psy15286 482 VLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATKMQNSRVIKFGLQE 561 (707)
Q Consensus 482 ~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (707)
++++ ++. .. . ......
T Consensus 179 ------------s~l~--~~~---~~-----------------------------------------~------~~~~~~ 194 (314)
T 1fnb_A 179 ------------SFLW--KMF---FE-----------------------------------------K------HDDYKF 194 (314)
T ss_dssp ------------HHHH--HHH---TC-----------------------------------------C------BTTBCC
T ss_pred ------------HHHH--HHH---Hh-----------------------------------------c------cccccC
Confidence 8888 322 10 0 000112
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhcCC-CceEEEEEecCCC---CCccchhhHHHhhHHHHHHHhhcCCcEEEEeC
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQKV-LTKSFLALSREPT---IPKTYVQDLMKKEASMLYRELIKEGGHFYVCG 636 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~g~-l~~l~~AfSRe~~---~~k~YVQd~L~~~~~~l~~~L~~~ga~iYVCG 636 (707)
.++++||||||+++ | +|.+||+++.+.+. .+++++++||+++ +.++|||++|.+..+.+++.+...+++||+||
T Consensus 195 ~~~v~L~~g~R~~~-d~~~~~el~~l~~~~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~~vyvCG 273 (314)
T 1fnb_A 195 NGLAWLFLGVPTSS-SLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYVYMCG 273 (314)
T ss_dssp CSEEEEEEEESSGG-GCCSHHHHHHHHHHCTTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHTTSTTEEEEEEE
T ss_pred CCCEEEEEecCCHH-HhhhHHHHHHHHHhCCCcEEEEEEECCCCcccCCCceechHHHHHhHHHHHHHHhcCCeEEEEEC
Confidence 46899999999985 7 99999999987642 2389999999753 24789999999877777765533678999999
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy15286 637 DCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIF 681 (707)
Q Consensus 637 p~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw 681 (707)
|++|+++|+++|.+++.+.+ . +|++++++|+++|||++|||
T Consensus 274 p~~m~~~v~~~L~~~~~~~g-~---~~~~~~~~l~~~~r~~~d~~ 314 (314)
T 1fnb_A 274 LKGMEKGIDDIMVSLAAAEG-I---DWIEYKRQLKKAEQWNVEVY 314 (314)
T ss_dssp CTTHHHHHHHHHHHHHHTTT-C---CHHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHhC-c---hHHHHHHHHHHCCcEEEecC
Confidence 99999999999999988764 3 57899999999999999999
No 10
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=99.97 E-value=8.9e-31 Score=278.60 Aligned_cols=275 Identities=20% Similarity=0.285 Sum_probs=217.3
Q ss_pred cCCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeCCCCCCCCCCCeeEEcccCCHHHHHHHHHHhcCCCCCCCCceEeccc
Q psy15286 84 VHSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMELQVL 163 (707)
Q Consensus 84 ~~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~~l~Y~pGD~l~I~P~N~~~~V~~lL~~L~L~~~d~d~~i~l~~~ 163 (707)
+.++.++.++|+.++.+++ ++...++++++|+.+..+.|.||.++.|.++..
T Consensus 28 ~~p~~~~~~~V~~~~~l~~-~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~--------------------------- 79 (310)
T 3vo2_A 28 YKPKEPYVGRCLSNTRITG-DDAPGETWHMVFSTEGEIPYREGQSIGIIADGE--------------------------- 79 (310)
T ss_dssp BBTTBCEEEEEEEEEECSC-SSSSSCEEEEEEECTTCCCCCTTCEEEEECSSB---------------------------
T ss_pred ecCCCCEEEEEEEEEEccC-CCCCccEEEEEEeCCCCCcccCCCEEEEECCCc---------------------------
Confidence 4567789999999999998 667778999999987778999999999875420
Q ss_pred ccccccccccccCCCCCCCCcccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHHHHHHHHhhhchHHHHHHhhcCCCCH
Q psy15286 164 SETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATDSAAYEDWRHWRFPHL 243 (707)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~Pp~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~ek~~L~~L~s~~~~y~~~~~~~~~sl 243 (707)
+..+
T Consensus 80 --------------------------------~~~g-------------------------------------------- 83 (310)
T 3vo2_A 80 --------------------------------DKNG-------------------------------------------- 83 (310)
T ss_dssp --------------------------------CTTS--------------------------------------------
T ss_pred --------------------------------CCCC--------------------------------------------
Confidence 0000
Q ss_pred HHHHhhCCCCCCChHHHHHHhCCCCCCcccccCCCCC---CCCeEEEEEEEEEeeccCCCCCccccccccccccccccHH
Q psy15286 244 LEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLA---HPNEIHLTVAVVTYRTQGASIHSDSAAYEDWRHWRFPHLL 320 (707)
Q Consensus 244 ldvL~~f~s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~---~p~~i~ltvavv~y~t~~~~~~~r~GlcS~~~~~~~~~~~ 320 (707)
-++++|.|||+|+|.. .++.++|+|.++.|.+.. ++.+.|.||+|
T Consensus 84 ---------------------~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~--~~~~~G~~S~~--------- 131 (310)
T 3vo2_A 84 ---------------------KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQ--GEIVKGVCSNF--------- 131 (310)
T ss_dssp ---------------------CBCCCEEEECCSCTTTTTTSSSEEEEEEECCEEECTT--SCEEECHHHHH---------
T ss_pred ---------------------CcCcceeeecCCCCcccCCCCCEEEEEEEEEEeccCC--CCcCCcchhhH---------
Confidence 0124689999999974 578999999999998765 55688999999
Q ss_pred HHhhhCCCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeecccccCccCccccccccccccccccCCCCC
Q psy15286 321 EVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKVHSRKVWQCPLIKKWNLYGSQPV 400 (707)
Q Consensus 321 d~l~~fps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (707)
|..+.+|+.+.+.. ++|
T Consensus 132 ----------------L~~l~~Gd~v~v~g--------------------------P~G--------------------- 148 (310)
T 3vo2_A 132 ----------------LCDLKPGADVKITG--------------------------PVG--------------------- 148 (310)
T ss_dssp ----------------HHTCCTTCEEEEEE--------------------------EEC---------------------
T ss_pred ----------------HhcCCCCCEEEEEe--------------------------ccC---------------------
Confidence 88899888765542 111
Q ss_pred CCCcEEEeeccCCCCCCCCCCCCCCceeeecccccCCCCCcccCCCCcccccccCchhhhhhhhhhccCCCCCCCchhhh
Q psy15286 401 AFAPVTVQFRSDQKDSSRESDGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMEL 480 (707)
Q Consensus 401 ~~~~~~~~~r~~~~~f~lp~~~~~Piim~~~~~~~~~~~~~~i~~Gt~~~~~~~~~~~~~~~~~~~~~~~GiAPfr~~~~ 480 (707)
+.|.+|.+...|+|| ||.|| |||||+
T Consensus 149 -------------~~~~~~~~~~~~~vl--------------IagGt-----------------------GIaP~~---- 174 (310)
T 3vo2_A 149 -------------KEMLMPKDPNATVIM--------------LATGT-----------------------GIAPFR---- 174 (310)
T ss_dssp -------------STTCCBSCTTCEEEE--------------EEEGG-----------------------GGHHHH----
T ss_pred -------------CcccCCCCCCCCEEE--------------EeCCc-----------------------chhHHH----
Confidence 014566666789999 99999 999999
Q ss_pred hhhccccCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhhcccCCcchHHHHHHHHHhhhhhhhhhcccc
Q psy15286 481 QVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATKMQNSRVIKFGLQ 560 (707)
Q Consensus 481 ~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (707)
++++ ++. .. . .....
T Consensus 175 -------------s~l~--~~~---~~----------------------------------------~-------~~~~~ 189 (310)
T 3vo2_A 175 -------------SFLW--KMF---LE----------------------------------------E-------HEDYK 189 (310)
T ss_dssp -------------HHHH--HHH---SS----------------------------------------C-------CTTCC
T ss_pred -------------HHHH--HHH---Hh----------------------------------------h-------ccccc
Confidence 9988 322 10 0 00112
Q ss_pred cCCceEEEEecCCCCCc-ccHHHHHHHHhcCC-CceEEEEEecCCC---CCccchhhHHHhhHHHHHHHhhcCCcEEEEe
Q psy15286 561 ELGKMTLFFGCQLKTMD-LYSDEKSKMLDQKV-LTKSFLALSREPT---IPKTYVQDLMKKEASMLYRELIKEGGHFYVC 635 (707)
Q Consensus 561 ~~g~i~LffG~R~~~~D-ly~dELe~~~~~g~-l~~l~~AfSRe~~---~~k~YVQd~L~~~~~~l~~~L~~~ga~iYVC 635 (707)
..++++||||||+.+ | +|.+||+++.+++. .+++++++||++. +.++|||++|.+..+.+++.+...++.||+|
T Consensus 190 ~~~~v~L~~g~r~~~-d~~~~~el~~l~~~~~~~~~v~~~~sr~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvC 268 (310)
T 3vo2_A 190 FSGLAWLFLGVPTSD-SLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYVYMC 268 (310)
T ss_dssp CCSEEEEEEEESSGG-GCCSHHHHHHHHHHCTTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHHTSTTEEEEEE
T ss_pred CCCcEEEEEEecChh-hcccHHHHHHHHHhCCCCEEEEEEECCCCCCCCCcceehHHHHHHHHHHHHHhcccCCcEEEEe
Confidence 247899999999986 7 99999999988742 3389999999864 2578999999998888888775578899999
Q ss_pred CChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy15286 636 GDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIF 681 (707)
Q Consensus 636 Gp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw 681 (707)
||++|+++|+++|.+++.+.+ + ++++|+++|+++|||++|||
T Consensus 269 Gp~~M~~~v~~~L~~~~~~~g-~---~~~~~~~~l~~~~r~~~e~y 310 (310)
T 3vo2_A 269 GLKGMEKGIDDIMLNLAAKDG-I---DWMQYKKQLKKGEQWNVEVY 310 (310)
T ss_dssp ESTTHHHHHHHHHHHHHHHTT-C---CHHHHHHHHHHTTSEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHcC-c---CHHHHHHHHHHCCceEEecC
Confidence 999999999999999998864 4 58999999999999999998
No 11
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=99.97 E-value=1.5e-30 Score=275.38 Aligned_cols=278 Identities=20% Similarity=0.261 Sum_probs=213.3
Q ss_pred CCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeCC-CCCCCCCCCeeEEcccCCHHHHHHHHHHhcCCCCCCCCceEeccc
Q psy15286 85 HSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRKP-HDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMELQVL 163 (707)
Q Consensus 85 ~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~-~~l~Y~pGD~l~I~P~N~~~~V~~lL~~L~L~~~d~d~~i~l~~~ 163 (707)
....++.++|+++++|++ .++++++++++|+++ ..+.|+||+++.|.+.|..
T Consensus 17 ~~~~~~~~~V~~~~~l~~-~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~-------------------------- 69 (304)
T 2bmw_A 17 RPNAPFIGKVISNEPLVK-EGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVD-------------------------- 69 (304)
T ss_dssp BTTBCEEEEEEEEEECSC-TTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBC--------------------------
T ss_pred CCCCCEEEEEEEEEEecC-CCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCc--------------------------
Confidence 456678999999999999 788999999999985 3589999999999876520
Q ss_pred ccccccccccccCCCCCCCCcccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHHHHHHHHhhhchHHHHHHhhcCCCCH
Q psy15286 164 SETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATDSAAYEDWRHWRFPHL 243 (707)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~Pp~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~ek~~L~~L~s~~~~y~~~~~~~~~sl 243 (707)
.+ +
T Consensus 70 -~~----g------------------------------------------------------------------------ 72 (304)
T 2bmw_A 70 -KN----G------------------------------------------------------------------------ 72 (304)
T ss_dssp -TT----S------------------------------------------------------------------------
T ss_pred -cc----C------------------------------------------------------------------------
Confidence 00 0
Q ss_pred HHHHhhCCCCCCChHHHHHHhCCCCCCcccccCCCCC---CCCeEEEEEEEEEeeccCCCCCccccccccccccccccHH
Q psy15286 244 LEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLA---HPNEIHLTVAVVTYRTQGASIHSDSAAYEDWRHWRFPHLL 320 (707)
Q Consensus 244 ldvL~~f~s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~---~p~~i~ltvavv~y~t~~~~~~~r~GlcS~~~~~~~~~~~ 320 (707)
.++++|.|||+|+|.. .++.++|+|..+.|.++.. +..+.|.||+|
T Consensus 73 ---------------------~~~~~R~ySias~~~~~~~~~~~l~l~Vk~~~y~~~~~-~~~~~G~~S~~--------- 121 (304)
T 2bmw_A 73 ---------------------KPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPES-GETVYGVCSTY--------- 121 (304)
T ss_dssp ---------------------CBCCCEEEEBCSCTTTTTTSSSEEEEEEECCEECSSSS-SSCEECHHHHH---------
T ss_pred ---------------------CCCCCcceecCCCCcccCCCCCEEEEEEEEEEeecccc-CcCCCcchhhH---------
Confidence 0136799999999863 4689999999988876531 34568999999
Q ss_pred HHhhhCCCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeecccccCccCccccccccccccccccCCCCC
Q psy15286 321 EVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKVHSRKVWQCPLIKKWNLYGSQPV 400 (707)
Q Consensus 321 d~l~~fps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (707)
|..+.+|+.+.+.. ++|
T Consensus 122 ----------------L~~l~~Gd~v~v~g--------------------------P~G--------------------- 138 (304)
T 2bmw_A 122 ----------------LTHIEPGSEVKITG--------------------------PVG--------------------- 138 (304)
T ss_dssp ----------------HHTCCTTCEEEEEE--------------------------EEC---------------------
T ss_pred ----------------HhcCCCCCEEEEEe--------------------------ccC---------------------
Confidence 88888888665443 111
Q ss_pred CCCcEEEeeccCCCCCCCCCCCCCCceeeecccccCCCCCcccCCCCcccccccCchhhhhhhhhhccCCCCCCCchhhh
Q psy15286 401 AFAPVTVQFRSDQKDSSRESDGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMEL 480 (707)
Q Consensus 401 ~~~~~~~~~r~~~~~f~lp~~~~~Piim~~~~~~~~~~~~~~i~~Gt~~~~~~~~~~~~~~~~~~~~~~~GiAPfr~~~~ 480 (707)
+.|.+|.+...|+|| ||.|| |||||+
T Consensus 139 -------------~~~~~~~~~~~~~vl--------------IagGt-----------------------GIaP~~---- 164 (304)
T 2bmw_A 139 -------------KEMLLPDDPEANVIM--------------LAGGT-----------------------GITPMR---- 164 (304)
T ss_dssp -------------SSSCCCSCTTCEEEE--------------EEEGG-----------------------GHHHHH----
T ss_pred -------------CceeCCCCCCCCEEE--------------EecCc-----------------------cHHHHH----
Confidence 014566556789999 99999 999999
Q ss_pred hhhccccCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhhcccCCcchHHHHHHHHHhhhhhhhhhcccc
Q psy15286 481 QVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATKMQNSRVIKFGLQ 560 (707)
Q Consensus 481 ~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (707)
++++ +.. .. . .+.......
T Consensus 165 -------------s~l~--~~~---~~----------------------------------------~---~~~~~~~~~ 183 (304)
T 2bmw_A 165 -------------TYLW--RMF---KD----------------------------------------A---ERAANPEYQ 183 (304)
T ss_dssp -------------HHHH--HHH---CH----------------------------------------H---HHHHCTTCC
T ss_pred -------------HHHH--HHH---Hh----------------------------------------h---hhhcccccc
Confidence 9888 322 10 0 000000011
Q ss_pred cCCceEEEEecCCCCCc-ccHHHHHHHHhcC--CCceEEEEEecCCC---CCccchhhHHHhhHHHHHHHhhcCCcEEEE
Q psy15286 561 ELGKMTLFFGCQLKTMD-LYSDEKSKMLDQK--VLTKSFLALSREPT---IPKTYVQDLMKKEASMLYRELIKEGGHFYV 634 (707)
Q Consensus 561 ~~g~i~LffG~R~~~~D-ly~dELe~~~~~g--~l~~l~~AfSRe~~---~~k~YVQd~L~~~~~~l~~~L~~~ga~iYV 634 (707)
..++++||||||+.+ | +|.+||+++.+.+ .+ ++++++||+++ +.++|||++|.++.+.+++++.+.++.||+
T Consensus 184 ~~~~v~l~~g~r~~~-d~~~~~el~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~v~~~l~~~~~~l~~~~~~~~~~vyv 261 (304)
T 2bmw_A 184 FKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDNF-RLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYI 261 (304)
T ss_dssp CCSCEEEEEEESSGG-GCTTHHHHHHHHHHCTTTE-EEEEEETTTCBCTTSSBCCHHHHHHHTHHHHHHHHTSTTEEEEE
T ss_pred cCCCEEEEEEeCChH-hcchHHHHHHHHHhCCCcE-EEEEEEcCCCCCCCCCcceehHHHHHhHHHHHHHhhcCCcEEEE
Confidence 247899999999974 7 9999999998763 45 89999999853 247899999998888888776556789999
Q ss_pred eCChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy15286 635 CGDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIF 681 (707)
Q Consensus 635 CGp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw 681 (707)
|||++|+++|+++|.+++.+. |++ |++++++|+++|||++|||
T Consensus 262 CGp~~m~~~v~~~l~~~~~~~-g~~---~~~~~~~m~~~~ry~~e~~ 304 (304)
T 2bmw_A 262 CGPPPMEEGIDAALSAAAAKE-GVT---WSDYQKDLKKAGRWHVETY 304 (304)
T ss_dssp EECTTHHHHHHHHHHHHHHTT-TCC---HHHHHHHHHHTTCEEEEEC
T ss_pred ECCHHHHHHHHHHHHHHHHHc-Ccc---HHHHHHHHHHcCCeEEecC
Confidence 999999999999999998875 454 7889999999999999999
No 12
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=99.97 E-value=2.1e-29 Score=277.86 Aligned_cols=275 Identities=21% Similarity=0.286 Sum_probs=213.6
Q ss_pred CCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeCCC-CCCCCCCCeeEEcccCCHHHHHHHHHHhcCCCCCCCCceEeccc
Q psy15286 85 HSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRKPH-DCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMELQVL 163 (707)
Q Consensus 85 ~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~-~l~Y~pGD~l~I~P~N~~~~V~~lL~~L~L~~~d~d~~i~l~~~ 163 (707)
.++.++.++|++++++++ +.+.+++++++|+.+. .+.|+||+++.|.+.+..
T Consensus 118 ~~~~~~~~~V~~~~~lt~-~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~-------------------------- 170 (402)
T 2b5o_A 118 RPKTPFLGKCIENYELVD-EGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGED-------------------------- 170 (402)
T ss_dssp CSSSCEEEEEEEEEECSC-TTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEE--------------------------
T ss_pred cCCCCEEEEEEEEEEcCC-CCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCC--------------------------
Confidence 455678999999999998 7888899999999854 489999999999865310
Q ss_pred ccccccccccccCCCCCCCCcccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHHHHHHHHhhhchHHHHHHhhcCCCCH
Q psy15286 164 SETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATDSAAYEDWRHWRFPHL 243 (707)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~Pp~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~ek~~L~~L~s~~~~y~~~~~~~~~sl 243 (707)
..+
T Consensus 171 ---------------------------------~~g-------------------------------------------- 173 (402)
T 2b5o_A 171 ---------------------------------KNG-------------------------------------------- 173 (402)
T ss_dssp ---------------------------------TTT--------------------------------------------
T ss_pred ---------------------------------cCC--------------------------------------------
Confidence 000
Q ss_pred HHHHhhCCCCCCChHHHHHHhCCCCCCcccccCCCCC---CCCeEEEEEEEEEeeccCCCCCccccccccccccccccHH
Q psy15286 244 LEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLA---HPNEIHLTVAVVTYRTQGASIHSDSAAYEDWRHWRFPHLL 320 (707)
Q Consensus 244 ldvL~~f~s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~---~p~~i~ltvavv~y~t~~~~~~~r~GlcS~~~~~~~~~~~ 320 (707)
.++++|.|||+|+|.. .++.++|+|.++.|.++.. ++...|.||+|
T Consensus 174 ---------------------~~~~~R~ySIas~p~~~~~~~~~l~l~Vk~~~y~~~~~-~~~~~G~~S~~--------- 222 (402)
T 2b5o_A 174 ---------------------KPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPES-GETVYGVCSTY--------- 222 (402)
T ss_dssp ---------------------EECCCEEEEBCSCTTTTTTSSCEEEEEEECCEEECTTT-CCEEECHHHHH---------
T ss_pred ---------------------CccCceeeeccCCCccccCCCCEEEEEEEEeeeccccc-CcCCCCchhHH---------
Confidence 0135799999999864 3689999999999977432 34568999999
Q ss_pred HHhhhCCCCCCChHHHHhccCCC-CceeEEecCCCCCCCCcceeEEEEEeecccccCccCccccccccccccccccCCCC
Q psy15286 321 EVLEQFPSIHLPPALLVAQLTPL-QPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKVHSRKVWQCPLIKKWNLYGSQP 399 (707)
Q Consensus 321 d~l~~fps~~~~~~~lL~~L~~g-~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (707)
|..+.+| +.+.+.. ++|
T Consensus 223 ----------------L~~l~~G~d~v~v~g--------------------------P~G-------------------- 240 (402)
T 2b5o_A 223 ----------------LCNLPVGTDDVKITG--------------------------PVG-------------------- 240 (402)
T ss_dssp ----------------HHTCCTTCCCEEEEE--------------------------EEC--------------------
T ss_pred ----------------HhhCCCCCceEEEEc--------------------------ccC--------------------
Confidence 8888888 8765532 111
Q ss_pred CCCCcEEEeeccCCCCCCCCCCCCCCceeeecccccCCCCCcccCCCCcccccccCchhhhhhhhhhccCCCCCCCchhh
Q psy15286 400 VAFAPVTVQFRSDQKDSSRESDGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPME 479 (707)
Q Consensus 400 ~~~~~~~~~~r~~~~~f~lp~~~~~Piim~~~~~~~~~~~~~~i~~Gt~~~~~~~~~~~~~~~~~~~~~~~GiAPfr~~~ 479 (707)
+.|.+|.+...|+|| ||.|| |||||+
T Consensus 241 --------------~~~~l~~~~~~~vvl--------------IAgGt-----------------------GIaP~~--- 266 (402)
T 2b5o_A 241 --------------KEMLLPDDEDATVVM--------------LATGT-----------------------GIAPFR--- 266 (402)
T ss_dssp --------------STTCCCSCTTCEEEE--------------EEEGG-----------------------GGHHHH---
T ss_pred --------------CcccCCccCCCCEEE--------------EEccc-----------------------CHHHHH---
Confidence 014566666789999 99999 999999
Q ss_pred hhhhccccCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhhcccCCcchHHHHHHHHHhhhhhhhhhccc
Q psy15286 480 LQVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATKMQNSRVIKFGL 559 (707)
Q Consensus 480 ~~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (707)
++++ ++. .. . ....
T Consensus 267 --------------s~l~--~l~---~~-----------------------------------------~------~~~~ 280 (402)
T 2b5o_A 267 --------------AFLW--RMF---KE-----------------------------------------Q------HEDY 280 (402)
T ss_dssp --------------HHHH--HHH---TC-----------------------------------------C------CSSC
T ss_pred --------------HHHH--HHH---Hh-----------------------------------------c------cccc
Confidence 9888 322 10 0 0001
Q ss_pred ccCCceEEEEecCCCCCc-ccHHHHHHHHhcCC-CceEEEEEecCCC---CCccchhhHHHhhHHHHHHHhhcCCcEEEE
Q psy15286 560 QELGKMTLFFGCQLKTMD-LYSDEKSKMLDQKV-LTKSFLALSREPT---IPKTYVQDLMKKEASMLYRELIKEGGHFYV 634 (707)
Q Consensus 560 ~~~g~i~LffG~R~~~~D-ly~dELe~~~~~g~-l~~l~~AfSRe~~---~~k~YVQd~L~~~~~~l~~~L~~~ga~iYV 634 (707)
...++++||||||+.+ | +|.+||+++.+.+. .++++++|||+++ +.++|||++|.+..+.+++++...+++||+
T Consensus 281 ~~~~~v~L~~g~R~~~-d~~~~~eL~~l~~~~~~~~~v~~~~S~~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyv 359 (402)
T 2b5o_A 281 KFKGKAWLIFGVPYTA-NILYKDDFEKMAAENPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYM 359 (402)
T ss_dssp CCCSEEEEEEEESSGG-GCTTHHHHHHHHHHCTTTEEEEEEETTTCBCTTSCBCCHHHHHHHTHHHHHHHHTSTTEEEEE
T ss_pred cccCCEEEEEecCCHH-HhHHHHHHHHHHHhCCCcEEEEEEECCCCcccCCCccchHHHHHHhHHHHHHHhccCCcEEEE
Confidence 1247899999999985 7 99999999988742 3389999999853 257899999998888888876445789999
Q ss_pred eCChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy15286 635 CGDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIF 681 (707)
Q Consensus 635 CGp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw 681 (707)
|||++|+++|+++|.++..+.+. ++.+++++|+++|||++|||
T Consensus 360 CGP~~M~~~v~~~L~~~g~~~g~----~~~~~~~~m~~~~Ry~~e~~ 402 (402)
T 2b5o_A 360 CGLKGMQPPIDETFTAEAEKRGL----NWEEMRRSMKKEHRWHVEVY 402 (402)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTC----CHHHHHHHHHHTTCEEEEEC
T ss_pred ECCHHHHHHHHHHHHHHHHHcCc----hHHHHHHHHHHCCCEEEecC
Confidence 99999999999999999887753 57899999999999999999
No 13
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=99.95 E-value=1.1e-27 Score=254.69 Aligned_cols=112 Identities=20% Similarity=0.341 Sum_probs=93.0
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhc-CCCceEEEEEecCCC----CCccchhhHHHhhHHHHHHHhhcCCcEEEEe
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQ-KVLTKSFLALSREPT----IPKTYVQDLMKKEASMLYRELIKEGGHFYVC 635 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~-g~l~~l~~AfSRe~~----~~k~YVQd~L~~~~~~l~~~L~~~ga~iYVC 635 (707)
.++++||||||+++ | +|.+||+++.++ +.+ ++++++||++. +.++|||++|.+..+.+++.+.+.+++ |||
T Consensus 196 ~~~v~l~~g~r~~~-d~~~~~el~~l~~~~~~~-~~~~~~s~~~~~~~~g~~~~v~~~l~~~~~~l~~~~~~~~~~-yvC 272 (314)
T 2rc5_A 196 TGNITLVYGAPYSD-ELVMMDYLKGLESKHKNF-KLITAISREEKNSFDGGRMYISHRVREQAEAVKKILNGGGRF-YIC 272 (314)
T ss_dssp CSCEEEEEEESSGG-GSCSHHHHHHHHHHHSSE-EEEEEETTTCBCTTTSSBCCHHHHHHHTHHHHHHHHHHTCEE-EEE
T ss_pred CCcEEEEEEeCCHH-HHhHHHHHHHHHHhCCcE-EEEEEECCCCCcccCCCceehhHHHHHhHHHHHHHhhcCCeE-EEe
Confidence 47899999999986 7 999999999876 545 89999999853 247899999998777777665334555 999
Q ss_pred -CChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy15286 636 -GDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIF 681 (707)
Q Consensus 636 -Gp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw 681 (707)
||++|+++|++.|.++.. .++ .++.++..|+++|||++|+|
T Consensus 273 GGp~~m~~~v~~~L~~~g~--~~i---~~e~f~~~l~~~gr~~~e~~ 314 (314)
T 2rc5_A 273 GGPKGMEKGVIEEIQKISG--NTG---TYEEFKHHLEGAHQLFVETY 314 (314)
T ss_dssp ESSTTTHHHHHHHHHHHHT--CCS---CHHHHHHHHHHTTCEEEEEC
T ss_pred CCcHHHHHHHHHHHHHHHh--ccc---hHHHHHHHHHHCCCEEEecC
Confidence 999999999999999754 233 47889999999999999999
No 14
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=99.95 E-value=5.8e-27 Score=250.27 Aligned_cols=298 Identities=16% Similarity=0.226 Sum_probs=200.9
Q ss_pred cCCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeCCCCCCCCCCCeeEEcccCCHHHHHHHHHHhcCCCCCCCCceEeccc
Q psy15286 84 VHSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMELQVL 163 (707)
Q Consensus 84 ~~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~~l~Y~pGD~l~I~P~N~~~~V~~lL~~L~L~~~d~d~~i~l~~~ 163 (707)
+.+++++.|+|+++.+|+. ++...+|+||+|+.+..+.|.+|..++|.|+..+.. +..+ ...
T Consensus 10 ~~~~~p~~~~v~~~~~l~~-~~~~~~v~~~~~~~~~~~~~~~GQ~~~i~~~~~~~~-----~~~~-------~~~----- 71 (316)
T 3jqq_A 10 YTVKNPLKCKIVDKINLVR-PNSPNEVYHLEINHNGLFKYLEGHTCGIIPYYNELD-----NNPN-------NQI----- 71 (316)
T ss_dssp SCSSSCEEEEEEEEEECSC-TTCSCCEEEEEEECTTCCCCCTTCEEEECTTCC---------------------------
T ss_pred ecCCCCEEEEEEeeEEccC-CCCCCceEEEEEeCCCCcceecCcEeEEECCCcccc-----cccc-------ccc-----
Confidence 4567899999999999998 788889999999998789999999999999865421 0000 000
Q ss_pred ccccccccccccCCCCCCCCcccHHHHHHHhhccCCCCCHHHHHHHHhhcCCHHHHHHHHHhhhchHHHHHHhhcCCCCH
Q psy15286 164 SETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATDSAAYEDWRHWRFPHL 243 (707)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~Pp~tl~~ll~~~lDl~~~p~~~~l~~La~~a~d~~ek~~L~~L~s~~~~y~~~~~~~~~sl 243 (707)
+ ..+ .++-++.-+ ..+ ++
T Consensus 72 -~---~~~---------------------~~~~~~~~~--~h~-----------------------------------~~ 89 (316)
T 3jqq_A 72 -N---KDH---------------------NIINTTNHT--NHN-----------------------------------NI 89 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -c---ccc---------------------ccccccccc--ccc-----------------------------------cc
Confidence 0 000 000000000 000 00
Q ss_pred HHHHhhCCCCCCChHHHHHHhCCCCCCcccccCCCCCCCCeEEEEEEEEEeecc-CCCCCccccccccccccccccHHHH
Q psy15286 244 LEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQ-GASIHSDSAAYEDWRHWRFPHLLEV 322 (707)
Q Consensus 244 ldvL~~f~s~~~pl~~Ll~~lp~l~PR~YSIsSSp~~~p~~i~ltvavv~y~t~-~~~~~~r~GlcS~~~~~~~~~~~d~ 322 (707)
+ -...-+...+|.|||||+|.. +.++|+|.++.|.+. .+.++.+.|.||+|
T Consensus 90 ~---------------~~~~~g~~~~R~ySIaS~p~~--~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~----------- 141 (316)
T 3jqq_A 90 A---------------LSHIKKQRCARLYSISSSNNM--ENLSVAIKIHKYEQTENAPNITNYGYCSGF----------- 141 (316)
T ss_dssp ----------------------CCCCEEEEBCSCTTS--SSEEEEEECCBC---------CCBCHHHHH-----------
T ss_pred c---------------cccCCCcccceeeecccCCCC--CeEEEEEEEEEecccccccCcCCCCchhHH-----------
Confidence 0 001113467999999999864 689999999988763 23356688999999
Q ss_pred hhhCCCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeecccccCccCccccccccccccccccCCCCCCC
Q psy15286 323 LEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKVHSRKVWQCPLIKKWNLYGSQPVAF 402 (707)
Q Consensus 323 l~~fps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (707)
|+.+.+|+.+.+.. ++|
T Consensus 142 --------------L~~l~~Gd~v~v~g--------------------------P~G----------------------- 158 (316)
T 3jqq_A 142 --------------IKNLKINDDIYLTG--------------------------AHG----------------------- 158 (316)
T ss_dssp --------------HHTCCTTCEEEEEE--------------------------EEC-----------------------
T ss_pred --------------HhhCCCCCEEEEEe--------------------------cCC-----------------------
Confidence 88899888765432 111
Q ss_pred CcEEEeeccCCCCCCCCCC---CCCCceeeecccccCCCCCcccCCCCcccccccCchhhhhhhhhhccCCCCCCCchhh
Q psy15286 403 APVTVQFRSDQKDSSRESD---GSQPVARTTLGIQMRKPHDCAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPME 479 (707)
Q Consensus 403 ~~~~~~~r~~~~~f~lp~~---~~~Piim~~~~~~~~~~~~~~i~~Gt~~~~~~~~~~~~~~~~~~~~~~~GiAPfr~~~ 479 (707)
.|.+|.+ ...|+|| ||.|| |||||+
T Consensus 159 ------------~f~l~~~~~~~~~~vvl--------------IAgGt-----------------------GIaP~~--- 186 (316)
T 3jqq_A 159 ------------YFNLPNDAIQKNTNFIF--------------IATGT-----------------------GISPYI--- 186 (316)
T ss_dssp ------------CCCCCTTHHHHTCCEEE--------------EEEGG-----------------------GGHHHH---
T ss_pred ------------ceEcCCcccCCCCcEEE--------------EeCCc-----------------------eechHH---
Confidence 2677765 3689999 99999 999999
Q ss_pred hhhhccccCCcccccccccccCCChhhHhhhhhhccccCCCCChhhhhhhhcccCCcchHHHHHHHHHhhhhhhhhhccc
Q psy15286 480 LQVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTPPPPALLQFFATFATAPDDQEILTLLATKMQNSRVIKFGL 559 (707)
Q Consensus 480 ~~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (707)
++++ ++. ... ..+. .+...
T Consensus 187 --------------sil~--~l~---~~~----------------------------------------~~~~--~~~~~ 205 (316)
T 3jqq_A 187 --------------SFLK--KLF---AYD----------------------------------------KNNL--YNRNS 205 (316)
T ss_dssp --------------HHHH--HHT---TCC----------------------------------------GGGT--TCCCC
T ss_pred --------------HHHH--HHH---Hhc----------------------------------------cccc--ccccc
Confidence 9988 433 100 0000 00011
Q ss_pred ccCCceEEEEecCCCCCc-ccHHHHHHHHhc--CCCceEEEEEecCCC--CCccchhhHHHhhHHHHHHHhhcCCcEEEE
Q psy15286 560 QELGKMTLFFGCQLKTMD-LYSDEKSKMLDQ--KVLTKSFLALSREPT--IPKTYVQDLMKKEASMLYRELIKEGGHFYV 634 (707)
Q Consensus 560 ~~~g~i~LffG~R~~~~D-ly~dELe~~~~~--g~l~~l~~AfSRe~~--~~k~YVQd~L~~~~~~l~~~L~~~ga~iYV 634 (707)
...++++||||||+++ | +|.+||+++.++ +.+ ++++++||++. +.++|||+.+.+..+.+++++...++.||+
T Consensus 206 ~~~~~v~L~~g~R~~~-d~~~~~eL~~l~~~~~~~~-~~~~~~s~~~~~~g~~g~V~~~l~~~~~~~~~~l~~~~~~vyv 283 (316)
T 3jqq_A 206 NYTGYITIYYGVYNED-SILYLNELEYFQKMYPNNI-NIHYVFSYKQNSDATSFYVQDEIYKRKTEFLNLFNNYKCELYI 283 (316)
T ss_dssp CCCCCEEEEEEESSGG-GCTTHHHHHHHHHHCTTTE-EEEEEEGGGCC---CBCCHHHHHHHTHHHHHHHHHHTCCEEEE
T ss_pred CCCCcEEEEEEecCHH-HhhcHHHHHHHHHhCCCcE-EEEEEECCCcccCCCccchhHHHHHhHHHHHHhhccCCeEEEE
Confidence 2457899999999996 6 999999999887 345 89999999853 368999999999888888877567899999
Q ss_pred eCChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy15286 635 CGDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIF 681 (707)
Q Consensus 635 CGp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw 681 (707)
|||++|+++|+++|.+. +++++ ...+|+|.|+|
T Consensus 284 CGP~~m~~~v~~~l~~~----G~~~~----------v~~~rih~E~f 316 (316)
T 3jqq_A 284 CGKKSIRYKVMDILKSH----DQFDE----------KKKKRVHVEVY 316 (316)
T ss_dssp EECSTHHHHHHHHHHC--------CH----------HHHTTEEEEEC
T ss_pred eCCHHHHHHHHHHHHHc----CCCcc----------cccccEEEEeC
Confidence 99999999999888765 33332 35679999987
No 15
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=99.94 E-value=1.1e-26 Score=246.62 Aligned_cols=113 Identities=30% Similarity=0.481 Sum_probs=96.9
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhcC--CCceEEEEEecCCCC---CccchhhHHHhhHHHHHHHhhcCCcEEEEe
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQK--VLTKSFLALSREPTI---PKTYVQDLMKKEASMLYRELIKEGGHFYVC 635 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~g--~l~~l~~AfSRe~~~---~k~YVQd~L~~~~~~l~~~L~~~ga~iYVC 635 (707)
.++++||||||+.+ | +|.+||+++.+.+ .+ ++++++||++.. .++||++.|.+..+.+++++ ..++.||+|
T Consensus 193 ~~~v~l~~g~r~~~-d~~~~~el~~l~~~~~~~~-~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~-~~~~~vyvC 269 (311)
T 3lo8_A 193 GGLAWLFLGVANSD-SLLYDEEFTSYLKQYPDNF-RYDKALSREQKNRSGGKMYVQDKIEEYSDEIFKLL-DGGAHIYFC 269 (311)
T ss_dssp CSEEEEEEEESSGG-GCSSHHHHHHHHHHCTTTE-EEEEEETTTC-------CCHHHHHHHTHHHHHHHH-HTTCEEEEE
T ss_pred CCCEEEEEecCChH-HhhHHHHHHHHHHhCCCcE-EEEEEECCCCcccCCCcceehHHHHHHHHHHHHhh-cCCcEEEEE
Confidence 36899999999985 7 9999999998874 45 899999998642 47899999998887777765 578899999
Q ss_pred CChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy15286 636 GDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIF 681 (707)
Q Consensus 636 Gp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw 681 (707)
||++|+++|+++|.+++.+.+ ++|++|+++|+++|||++|||
T Consensus 270 Gp~~m~~~v~~~L~~~~~~~g----~~~~~~~~~l~~~~ry~~e~y 311 (311)
T 3lo8_A 270 GLKGMMPGIQDTLKKVAERRG----ESWDQKLAQLKKNKQWHVEVY 311 (311)
T ss_dssp ECGGGHHHHHHHHHHHHHHTT----CCHHHHHHHHHHTTCEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHhcc----HHHHHHHHHHHHCCcEEEecC
Confidence 999999999999999998764 368899999999999999999
No 16
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.72 E-value=3.2e-18 Score=179.17 Aligned_cols=100 Identities=21% Similarity=0.308 Sum_probs=73.8
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCC-----CCccchhhHHHhhHHHHHHHhhcCCcEEEEe
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPT-----IPKTYVQDLMKKEASMLYRELIKEGGHFYVC 635 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~-----~~k~YVQd~L~~~~~~l~~~L~~~ga~iYVC 635 (707)
.++++||||||+.+ | +|.+||+++.+.+...++++++||++. +.++||++.+.+.. +.+.....++++|+|
T Consensus 185 ~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~~g~~g~v~~~~~~~~--l~~~~~~~~~~vyvC 261 (290)
T 2r6h_A 185 GRKVSYWYGARSKN-EIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIHQVIYDNY--LKDHDAPEDIEYYMC 261 (290)
T ss_dssp CSCEEEEEEESSGG-GCCSHHHHHHHHHHCTTEEEEEEESSCCGGGCCCSCBSCHHHHHHHHT--TTTCSCGGGEEEEEE
T ss_pred CCcEEEEEEcCCHH-HHHHHHHHHHHHHhCCCeEEEEEEccCCcccCCCCeeEecCHHHHHhH--HhhccCcCCcEEEEE
Confidence 47899999999995 7 999999999876433489999998742 24678987764321 111111245689999
Q ss_pred CChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEec
Q psy15286 636 GDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFG 682 (707)
Q Consensus 636 Gp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~ 682 (707)
||++|+++|++.|.+. |++ ..+++.|.||
T Consensus 262 Gp~~m~~~v~~~l~~~-----G~~-------------~~~i~~e~F~ 290 (290)
T 2r6h_A 262 GPGPMANAVKGMLENL-----GVP-------------RNMLFFDDFG 290 (290)
T ss_dssp CCHHHHHHHHHHHHHH-----TCC-------------GGGEEEECCC
T ss_pred CCHHHHHHHHHHHHHc-----CCC-------------HHHEEecccC
Confidence 9999999999998765 553 4588988885
No 17
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.70 E-value=3.4e-17 Score=168.02 Aligned_cols=97 Identities=13% Similarity=0.236 Sum_probs=75.8
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhc-CCCceEEEEEecCCC---CCccchhhHHHhhHHHHHHHhhcCCcEEEEeC
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQ-KVLTKSFLALSREPT---IPKTYVQDLMKKEASMLYRELIKEGGHFYVCG 636 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~-g~l~~l~~AfSRe~~---~~k~YVQd~L~~~~~~l~~~L~~~ga~iYVCG 636 (707)
.++++||||+|+.+ | +|.+||+++.+. +.+ ++++++||+++ +.++||++.+.+. +.+. ..++.+|+||
T Consensus 145 ~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~-~~~~~~s~~~~~~~g~~g~v~~~l~~~---~~~~--~~~~~vyvCG 217 (250)
T 1tvc_A 145 PNETRIYFGVNTEP-ELFYIDELKSLERSMRNL-TVKACVWHPSGDWEGEQGSPIDALRED---LESS--DANPDIYLCG 217 (250)
T ss_dssp CSCEEEEEECSSST-TCCCHHHHHHHHHHSSSC-EEEECCSSCSSCCSSSSSSSSHHHHHH---HHHS--SSSSEEEEES
T ss_pred CceEEEEEEeCCHH-HhhhHHHHHHHHHhCCCe-EEEEEeccCCCCcCCccceehHHHHhh---hhcc--cCCcEEEEeC
Confidence 47899999999996 6 999999999865 445 79999998643 2578999877642 1111 2577999999
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEecc
Q psy15286 637 DCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFGI 683 (707)
Q Consensus 637 p~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~~ 683 (707)
|++|+++|++.|.+. |+ ...|++.|.|+.
T Consensus 218 p~~m~~~v~~~l~~~-----G~-------------~~~~i~~e~F~~ 246 (250)
T 1tvc_A 218 PPGMIDAACELVRSR-----GI-------------PGEQVFFEKFLP 246 (250)
T ss_dssp SHHHHHHHHHHHHHH-----CC-------------CCSEEEECCCSS
T ss_pred CHHHHHHHHHHHHHc-----CC-------------CHHHEEEEeccC
Confidence 999999999988754 55 357999999974
No 18
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.67 E-value=1.8e-17 Score=167.83 Aligned_cols=95 Identities=15% Similarity=0.145 Sum_probs=72.2
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhc-CCCceEEEEEecCCCC---CccchhhHHHhhHHHHHHHhhcCCcEEEEeC
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQ-KVLTKSFLALSREPTI---PKTYVQDLMKKEASMLYRELIKEGGHFYVCG 636 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~-g~l~~l~~AfSRe~~~---~k~YVQd~L~~~~~~l~~~L~~~ga~iYVCG 636 (707)
.++++||||+|+.+ | +|.+||+++.++ +.+ +++.++|+++++ .++||++.+.+. +....++.+|+||
T Consensus 130 ~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~-~~~~~~s~~~~~~~g~~g~v~~~~~~~------~~~~~~~~vyvCG 201 (232)
T 1qfj_A 130 NRDITIYWGGREEQ-HLYDLCELEALSLKHPGL-QVVPVVEQPEAGWRGRTGTVLTAVLQD------HGTLAEHDIYIAG 201 (232)
T ss_dssp TCCEEEEEEESSGG-GCTTHHHHHHHHHHCTTE-EEEEEESSCCTTCCSEESCHHHHHHHH------CSCCTTCEEEEES
T ss_pred CCcEEEEEeeCCHH-HhhhHHHHHHHHHHCCCe-EEEEEEcCCCCCcCCceeeHHHHHHHh------cCCccccEEEEEC
Confidence 47899999999996 7 999999999876 445 899999987542 467888766542 1123567999999
Q ss_pred ChhhHHHHHHHH-HHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEec
Q psy15286 637 DCTMAEHVYQTL-KYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFG 682 (707)
Q Consensus 637 p~~M~~~V~~~L-~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~ 682 (707)
|++|+++|++.| .+. |++ ..|++.|.|+
T Consensus 202 p~~m~~~v~~~l~~~~-----g~~-------------~~~i~~E~F~ 230 (232)
T 1qfj_A 202 RFEMAKIARDLFCSER-----NAR-------------EDRLFGDAFA 230 (232)
T ss_dssp CHHHHHHHHHHHHHHS-----CCC-------------GGGEECTHHH
T ss_pred CHHHHHHHHHHHHHHc-----CCC-------------HHHEEEeeec
Confidence 999999999888 443 553 4577777775
No 19
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.67 E-value=5e-17 Score=166.25 Aligned_cols=106 Identities=17% Similarity=0.235 Sum_probs=75.7
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhc--CCCceEEEEEecCCCC--CccchhhHHHhhH-HHHHHH-hhcCCcEEEE
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQ--KVLTKSFLALSREPTI--PKTYVQDLMKKEA-SMLYRE-LIKEGGHFYV 634 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~--g~l~~l~~AfSRe~~~--~k~YVQd~L~~~~-~~l~~~-L~~~ga~iYV 634 (707)
.++++||||+|+.+ | +|.+||+++.++ +.+ ++++++||++.. .++||++.+.+.. +.+... +...++.+|+
T Consensus 134 ~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~-~~~~~~s~~~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~vy~ 211 (248)
T 1fdr_A 134 FKNLVLVHAARYAA-DLSYLPLMQELEKRYEGKL-RIQTVVSRETAAGSLTGRIPALIESGELESTIGLPMNKETSHVML 211 (248)
T ss_dssp CSEEEEEEEESSGG-GCTTHHHHHHHHHHTTTSE-EEEEEESSSCCTTEEESCHHHHHHTSHHHHHHTSCCCTTTEEEEE
T ss_pred CCcEEEEEEcCCHH-HhhHHHHHHHHHHhCcCcE-EEEEEEecCCCCCCcceeeChHHHhhhHHHhhccCCCccCCEEEE
Confidence 47899999999985 6 999999999875 355 799999998642 3689998876542 221111 1135679999
Q ss_pred eCChhhHHHHHHHH-HHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy15286 635 CGDCTMAEHVYQTL-KYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIF 681 (707)
Q Consensus 635 CGp~~M~~~V~~~L-~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw 681 (707)
|||++|+++|++.| .+. |++. +++...++++.|-|
T Consensus 212 CGp~~m~~~v~~~l~~~~-----G~~~-------~~i~~~~~~~~E~~ 247 (248)
T 1fdr_A 212 CGNPQMVRDTQQLLKETR-----QMTK-------HLRRRPGHMTAEHY 247 (248)
T ss_dssp EECHHHHHHHHHHHHHHH-----CCCB-------CBTTBCCSEEEEEC
T ss_pred eCCHHHHHHHHHHHHHHc-----CCCh-------HHcCCCccEEEEec
Confidence 99999999999998 654 4431 12234567777765
No 20
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.67 E-value=3.4e-17 Score=170.21 Aligned_cols=83 Identities=23% Similarity=0.360 Sum_probs=63.5
Q ss_pred cCCceEEEEecCCCCCc-ccHHHHHHHHhcC--CCceEEEEEecCCCC---CccchhhHHHhhHHHHHHHhh--cCCcEE
Q psy15286 561 ELGKMTLFFGCQLKTMD-LYSDEKSKMLDQK--VLTKSFLALSREPTI---PKTYVQDLMKKEASMLYRELI--KEGGHF 632 (707)
Q Consensus 561 ~~g~i~LffG~R~~~~D-ly~dELe~~~~~g--~l~~l~~AfSRe~~~---~k~YVQd~L~~~~~~l~~~L~--~~ga~i 632 (707)
..++++||||+|+.+ | +|.+||+++.++. .+ ++++++||++.+ .++||++.+.+ +.+. ..++.+
T Consensus 174 ~~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~-~~~~~~s~~~~~~~~~~g~v~~~~l~------~~l~~~~~~~~v 245 (275)
T 1umk_A 174 DHTVCHLLFANQTEK-DILLRPELEELRNKHSARF-KLWYTLDRAPEAWDYGQGFVNEEMIR------DHLPPPEEEPLV 245 (275)
T ss_dssp CCCEEEEEEEESSGG-GCTTHHHHHHHHHHCTTTE-EEEEEESSCCSSCSSEESSCCHHHHH------HHSCCGGGCCEE
T ss_pred CCcEEEEEEEcCCHH-HhhHHHHHHHHHHhCcCcE-EEEEEEcCCCccccCccCccCHHHHH------HhcCCCCCCeEE
Confidence 357899999999975 7 9999999998763 45 799999997532 36788865322 1221 256799
Q ss_pred EEeCChhhHH-HHHHHHHHH
Q psy15286 633 YVCGDCTMAE-HVYQTLKYV 651 (707)
Q Consensus 633 YVCGp~~M~~-~V~~~L~~i 651 (707)
|+|||++|++ +|++.|.+.
T Consensus 246 yvCGp~~m~~~~v~~~L~~~ 265 (275)
T 1umk_A 246 LMCGPPPMIQYACLPNLDHV 265 (275)
T ss_dssp EEESCHHHHHHTTHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHHc
Confidence 9999999999 999988765
No 21
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.66 E-value=3.2e-17 Score=167.03 Aligned_cols=91 Identities=21% Similarity=0.364 Sum_probs=71.4
Q ss_pred eEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCCC--CccchhhHHHhhHHHHHHHhhcCCcEEEEeCChhhH
Q psy15286 565 MTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPTI--PKTYVQDLMKKEASMLYRELIKEGGHFYVCGDCTMA 641 (707)
Q Consensus 565 i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~~--~k~YVQd~L~~~~~~l~~~L~~~ga~iYVCGp~~M~ 641 (707)
++||||+|+.+ | +|.+||+++.+.+.+ ++++++|++... .++++++.+. .+...+..+|+|||++|+
T Consensus 144 v~l~~~~r~~~-~~~~~~el~~l~~~~~~-~~~~~~s~~~~~~~~~g~~~~~~~--------~~~~~~~~vyvCGp~~m~ 213 (243)
T 4eh1_A 144 VTYLYACNSAK-EHTFAQETAQLIAQQGW-MQQVWYRDESADDVLQGEMQLAEL--------ILPIEDGDFYLCGPIGFM 213 (243)
T ss_dssp EEEEEEESSGG-GCTTHHHHHHHHHHHTC-EEEEEESSCCCTTCEESSCCCTTS--------CCCTTTCEEEEEECHHHH
T ss_pred EEEEEEeCChh-hhhHHHHHHHHHHhCCe-EEEEEEccCCCcccccCCccHHHe--------eccCCCcEEEEECCHHHH
Confidence 99999999986 7 999999999877645 799999987542 2566654332 122467899999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEecc
Q psy15286 642 EHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFGI 683 (707)
Q Consensus 642 ~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~~ 683 (707)
++|++.|.+. |++ ..+++.|.|+.
T Consensus 214 ~~v~~~l~~~-----g~~-------------~~~i~~E~F~~ 237 (243)
T 4eh1_A 214 QYVVKQLLAL-----GVD-------------KARIHYEVFGP 237 (243)
T ss_dssp HHHHHHHHHH-----TCC-------------GGGEEEEECCC
T ss_pred HHHHHHHHHc-----CCC-------------HHHEEEeccCC
Confidence 9999998865 553 46899999985
No 22
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.65 E-value=1.3e-16 Score=174.99 Aligned_cols=98 Identities=14% Similarity=0.258 Sum_probs=70.8
Q ss_pred CCceEEEEecCCCCCcccHHHHHHHHhcCCCceEEEEEecCCCCC--------ccchhhHHHhhHHHHHHHhhcCCcEEE
Q psy15286 562 LGKMTLFFGCQLKTMDLYSDEKSKMLDQKVLTKSFLALSREPTIP--------KTYVQDLMKKEASMLYRELIKEGGHFY 633 (707)
Q Consensus 562 ~g~i~LffG~R~~~~Dly~dELe~~~~~g~l~~l~~AfSRe~~~~--------k~YVQd~L~~~~~~l~~~L~~~ga~iY 633 (707)
.++++||||+|+.+..+|.+||+++.++....++++++|+++... .++++.. .+.+.+...++.+|
T Consensus 293 ~~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~~~~~~~~G~i~~~------~l~~~~~~~~~~vy 366 (403)
T 1cqx_A 293 PRQVVFVHGARNSAVHAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVK------QIEKSILLPDADYY 366 (403)
T ss_dssp CCCEEEEEEESCSSSCHHHHHHHHHHHHCTTEEEEEEESSCCTTCCBTTTBSEESSCCGG------GSHHHHCCTTCEEE
T ss_pred CCcEEEEEEeCChhhCcHHHHHHHHHHhCCCcEEEEEECCCCcccccccccCcCCCcCHH------HHhhccCCCCCEEE
Confidence 468999999999973399999999987643348999999975421 2344321 11121112378999
Q ss_pred EeCChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEecc
Q psy15286 634 VCGDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFGI 683 (707)
Q Consensus 634 VCGp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~~ 683 (707)
+|||++||++|++.|.+. |++ ..|++.|.||.
T Consensus 367 vCGp~~m~~~v~~~L~~~-----Gv~-------------~~~i~~E~F~~ 398 (403)
T 1cqx_A 367 ICGPIPFMRMQHDALKNL-----GIH-------------EARIHYEVFGP 398 (403)
T ss_dssp EESSHHHHHHHHHHHHHT-----TCC-------------GGGEEECCCSS
T ss_pred EeCCHHHHHHHHHHHHHc-----CCC-------------HHHeEEeeecC
Confidence 999999999999988654 563 56899999985
No 23
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.65 E-value=3.4e-17 Score=169.98 Aligned_cols=105 Identities=22% Similarity=0.302 Sum_probs=73.3
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhcCC--------CceEEEEEecCCCCCccchhhHHHhhHHHHHHHh-----hc
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQKV--------LTKSFLALSREPTIPKTYVQDLMKKEASMLYREL-----IK 627 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~g~--------l~~l~~AfSRe~~~~k~YVQd~L~~~~~~l~~~L-----~~ 627 (707)
.++++||||+|+.+ | +|.+||+++.++.. ..++++++||++.+.++||++.+.+. .+.+.+ ..
T Consensus 150 ~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~G~v~~~~~~~--~l~~~~~~~~~~~ 226 (271)
T 4fk8_A 150 FDKVVLTHTCRLKG-ELAYMDYIKHDLPGHEYLGDVIREKLVYYPTVTREEFENEGRITDLIASG--KLFTDLDMPPFSP 226 (271)
T ss_dssp CSEEEEEECCCSHH-HHHHHHHHHTCCTTCTTHHHHHHHHEEEEECC-------CCHHHHHHHHS--HHHHHTTCCCCCT
T ss_pred CCCEEEEEecCCHH-HHhHHHHHHHHHHhCccccccccceEEEEEEecCCccccccccChHHhcc--hhhhhcccccCCC
Confidence 36899999999995 7 99999999877642 12788999998755678999877653 122221 23
Q ss_pred CCcEEEEeCChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy15286 628 EGGHFYVCGDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIF 681 (707)
Q Consensus 628 ~ga~iYVCGp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw 681 (707)
+++.+|+|||++|+++|++.|.+. |++. +++...|+|+.|.|
T Consensus 227 ~~~~v~vCGp~~m~~~v~~~l~~~-----gv~~-------~~i~~~~~~~~E~y 268 (271)
T 4fk8_A 227 EQDRVMLCGSTAMLKDTTELLKKA-----GLVE-------GKNSAPGHYVIERA 268 (271)
T ss_dssp TTEEEEEEECHHHHHHHHHHHHHT-----TCCB-------CBTTBCBSEEEEES
T ss_pred CCCEEEEECCHHHHHHHHHHHHHc-----CCch-------hhcCCCCcEEEEEe
Confidence 577999999999999999999765 4431 13455789999988
No 24
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.65 E-value=8.5e-17 Score=172.52 Aligned_cols=97 Identities=16% Similarity=0.211 Sum_probs=75.7
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCCC--CccchhhHHHhhHHHHHHHhhcCCcEEEEeCCh
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPTI--PKTYVQDLMKKEASMLYRELIKEGGHFYVCGDC 638 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~~--~k~YVQd~L~~~~~~l~~~L~~~ga~iYVCGp~ 638 (707)
.++++||||+|+.+ | +|.+||+++.+....+++++++|+++.. .++||++.+.+. .+.+.+..+|+|||+
T Consensus 238 ~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~~g~v~~~l~~~------~~~~~~~~vy~CGp~ 310 (338)
T 1krh_A 238 EHPVRLVFGVTQDC-DLVALEQLDALQQKLPWFEYRTVVAHAESQHERKGYVTGHIEYD------WLNGGEVDVYLCGPV 310 (338)
T ss_dssp SSCEEEEEEESSGG-GCCCHHHHHHHHHHCTTEEEEEEETTCCSSSSEESCSGGGCCGG------GGGGGCSEEEEEEEH
T ss_pred CCeEEEEEEeCCHH-HhhhHHHHHHHHHhCCCeEEEEEEecCCCCCCccCccCHHHHHh------hcccCCcEEEEECCH
Confidence 47899999999985 7 9999999998763333899999997542 368999877632 122356799999999
Q ss_pred hhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEecc
Q psy15286 639 TMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFGI 683 (707)
Q Consensus 639 ~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~~ 683 (707)
+|+++|++.|.+. |++ ..+++.|.|+.
T Consensus 311 ~m~~~v~~~l~~~-----G~~-------------~~~i~~e~F~~ 337 (338)
T 1krh_A 311 PMVEAVRSWLDTQ-----GIQ-------------PANFLFEKFSA 337 (338)
T ss_dssp HHHHHHHHHHHHH-----TCC-------------CSEEEEEEECC
T ss_pred HHHHHHHHHHHHc-----CCC-------------HHHEEEEeecC
Confidence 9999999988764 553 56999999974
No 25
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.65 E-value=1.6e-16 Score=165.46 Aligned_cols=107 Identities=14% Similarity=0.169 Sum_probs=76.4
Q ss_pred CCceEEEEecCCCCCc-ccHHHHH-HHHh-----c---CCCceEEEEEecCCCCCccchhhHHHhhH-HHHHHH--hhcC
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKS-KMLD-----Q---KVLTKSFLALSREPTIPKTYVQDLMKKEA-SMLYRE--LIKE 628 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe-~~~~-----~---g~l~~l~~AfSRe~~~~k~YVQd~L~~~~-~~l~~~--L~~~ 628 (707)
.++++||||+|+.+ | +|.+||+ .+.+ + +.+ +++.++||++.+.++||++.+.+.. +....+ +...
T Consensus 148 ~~~v~l~~~~r~~~-~~~~~~el~~~l~~~~~~~~~~~~~~-~~~~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~ 225 (272)
T 2bgi_A 148 FDEVIMMHACRTVA-ELEYGRQLVEALQEDPLIGELVEGKL-KYYPTTTREEFHHMGRITDNLASGKVFEDLGIAPMNPE 225 (272)
T ss_dssp CSEEEEEEEESSSG-GGHHHHHHHHHHHHCTTTTTTSTTTE-EEEEEESSSCCSSBCCHHHHHHSCHHHHHHTCCCCCTT
T ss_pred CCcEEEEEEeCCHH-HhhHHHHHHHHHHhcchhhcccCCcE-EEEEEecCCccccCceechHHHhhhHhhhcccccCCCC
Confidence 46899999999995 7 9999999 8876 2 455 7899999985445889998876532 111100 1125
Q ss_pred CcEEEEeCChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEec
Q psy15286 629 GGHFYVCGDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFG 682 (707)
Q Consensus 629 ga~iYVCGp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~ 682 (707)
++.+|+|||++|+++|++.|.+. |++. +++...++++.|-|.
T Consensus 226 ~~~vyvCGp~~m~~~v~~~l~~~-----G~~~-------~~i~~~~~i~~E~f~ 267 (272)
T 2bgi_A 226 TDRAMVCGSLAFNVDVMKVLESY-----GLRE-------GANSEPREFVVEKAF 267 (272)
T ss_dssp TEEEEEEECHHHHHHHHHHHHTT-----TCCB-------CBTTBCBSEEEEESS
T ss_pred CcEEEEECCHHHHHHHHHHHHHc-----CCCh-------HHcCCccceEeeeee
Confidence 67999999999999999988653 4431 112234788888875
No 26
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.64 E-value=8.4e-17 Score=176.22 Aligned_cols=97 Identities=12% Similarity=0.188 Sum_probs=70.7
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCCC--------CccchhhHHHhhHHHHHHHhhcCCcEE
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPTI--------PKTYVQDLMKKEASMLYRELIKEGGHF 632 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~~--------~k~YVQd~L~~~~~~l~~~L~~~ga~i 632 (707)
.++++||||+|+.+ | +|.+||+++.++....++++++|+++.. ..++++... +.+.+...++.+
T Consensus 287 ~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~~~~~~~~G~~~~~~------l~~~~~~~~~~v 359 (396)
T 1gvh_A 287 TAQVNWFHAAENGD-VHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSEGLMDLSK------LEGAFSDPTMQF 359 (396)
T ss_dssp CSCEEEEEEESCTT-TCCSHHHHHHHHHTSSSEEEEEEESSCCHHHHHHTCCSEESSCCGGG------SSSCCCCTTCEE
T ss_pred CCcEEEEEEeCCHH-HhhhHHHHHHHHHHCCCeEEEEEECCCCccccccCccCccCcCCHHH------HhhccCCCCCEE
Confidence 47899999999996 6 9999999998874434899999997521 234454211 111101137899
Q ss_pred EEeCChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEecc
Q psy15286 633 YVCGDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFGI 683 (707)
Q Consensus 633 YVCGp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~~ 683 (707)
|+|||++|+++|++.|.+. |++ ..|++.|.||.
T Consensus 360 yvCGp~~m~~~v~~~L~~~-----Gv~-------------~~~i~~E~F~~ 392 (396)
T 1gvh_A 360 YLCGPVGFMQFTAKQLVDL-----GVK-------------QENIHYECFGP 392 (396)
T ss_dssp EEESCHHHHHHHHHHHHHT-----TCC-------------GGGEEEECSSS
T ss_pred EEeCCHHHHHHHHHHHHHc-----CCC-------------HHHEEEeccCC
Confidence 9999999999999988753 553 56899999985
No 27
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.63 E-value=1.3e-16 Score=164.29 Aligned_cols=108 Identities=19% Similarity=0.227 Sum_probs=74.5
Q ss_pred CCceEEEEecCCCCCc-ccHHHHH-HHHh--------cCCCceEEEEEecCCCCCccchhhHHHhhH-HHHHHH--hhcC
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKS-KMLD--------QKVLTKSFLALSREPTIPKTYVQDLMKKEA-SMLYRE--LIKE 628 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe-~~~~--------~g~l~~l~~AfSRe~~~~k~YVQd~L~~~~-~~l~~~--L~~~ 628 (707)
.++++||||+|+.+ | +|.+||+ ++.+ .+.+ ++++++||++.+.++||++.+.+.. +..... +...
T Consensus 134 ~~~v~l~~~~r~~~-~~~~~~el~~~l~~~~~~~~~~~~~~-~~~~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~ 211 (257)
T 2qdx_A 134 YEKVILVHGVRWVS-ELAYADFITKVLPEHEYFGDQVKEKL-IYYPLVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQ 211 (257)
T ss_dssp CSEEEEEEEESSGG-GCTTHHHHHTTGGGCTTTHHHHHHHE-EEEEEESSSCCSSBSCHHHHHHHSHHHHHHTCCCCCTT
T ss_pred CCeEEEEEEcCCHH-HhHhHHHHHHHHHhchhhhccCCCcE-EEEEEecCCCcccCceechhhhhhhHHHhcccccCCcC
Confidence 36899999999995 6 9999999 8865 2345 7899999985445789998876532 111110 1125
Q ss_pred CcEEEEeCChhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEec
Q psy15286 629 GGHFYVCGDCTMAEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFG 682 (707)
Q Consensus 629 ga~iYVCGp~~M~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~ 682 (707)
++.+|+|||++|+++|++.|.+. |++.+ ......++++.|-|-
T Consensus 212 ~~~vyvCGp~~m~~~v~~~l~~~-----G~~~~------~~~~~~~~i~~E~~w 254 (257)
T 2qdx_A 212 DDRAMICGSPSMLEETSAVLDSF-----GLKIS------PRMGEPGDYLIERAF 254 (257)
T ss_dssp TEEEEEEECHHHHHHHHHHHHHT-----TCCBC------SSTTSCBSEEEEESC
T ss_pred CCEEEEECCHHHHHHHHHHHHHc-----CCChH------HhcCCCCcEEEeeee
Confidence 67999999999999999988753 55311 001123578877763
No 28
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.63 E-value=2.4e-16 Score=173.00 Aligned_cols=92 Identities=11% Similarity=0.205 Sum_probs=71.2
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCCCCccchhhHHHhhHHHHHHHhhcCCcEEEEeCChhh
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPTIPKTYVQDLMKKEASMLYRELIKEGGHFYVCGDCTM 640 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~~~k~YVQd~L~~~~~~l~~~L~~~ga~iYVCGp~~M 640 (707)
.++++||||+|+.+ + +|.+||+++.++....++++++|+++ ++++. +.+.+.+ ..++.+|+|||++|
T Consensus 300 ~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~s~~~----g~~~~------~~l~~~~-~~~~~vyvCGp~~m 367 (399)
T 4g1v_A 300 NRPIYWIQSSYDEK-TQAFKKHVDELLAECANVDKIIVHTDTE----PLINA------AFLKEKS-PAHADVYTCGSLAF 367 (399)
T ss_dssp TSCEEEEEEESSST-TSTTHHHHHHHHTTCSSEEEEEEETTTS----CCCCH------HHHHHHS-CSSCEEEEEECHHH
T ss_pred CCCEEEEEecCCHH-HhhhHHHHHHHHHhCCCcEEEEEEeCCC----CcccH------HHHHhhC-CCCCEEEEECCHHH
Confidence 47899999999985 6 99999999987744348999999864 35542 1222333 34789999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEecc
Q psy15286 641 AEHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFGI 683 (707)
Q Consensus 641 ~~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~~ 683 (707)
+++|++.|.+. |++ ..|++.|.||.
T Consensus 368 ~~~v~~~L~~~-----Gv~-------------~~~i~~E~Fgp 392 (399)
T 4g1v_A 368 MQAMIGHLKEL-----EHR-------------DDMIHYEPFGP 392 (399)
T ss_dssp HHHHHHHHHHT-----TCC-------------GGGEEEEESSC
T ss_pred HHHHHHHHHHc-----CCC-------------HHHeeeeccCC
Confidence 99999998654 553 56999999985
No 29
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.61 E-value=5.9e-16 Score=157.80 Aligned_cols=83 Identities=19% Similarity=0.227 Sum_probs=62.7
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCCC---CccchhhHHHhhHHHHHHHhh--cCCcEEEEe
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPTI---PKTYVQDLMKKEASMLYRELI--KEGGHFYVC 635 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~~---~k~YVQd~L~~~~~~l~~~L~--~~ga~iYVC 635 (707)
.++++||||+|+.+ | +|.+||+++.++....++++++||++++ .++||++.+.+ +.+. ..++.+|+|
T Consensus 145 ~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~g~~g~v~~~~l~------~~~~~~~~~~~vy~C 217 (243)
T 2eix_A 145 KTIINLIFANVNED-DILLRTELDDMAKKYSNFKVYYVLNNPPAGWTGGVGFVSADMIK------QHFSPPSSDIKVMMC 217 (243)
T ss_dssp CCEEEEEEEEEEGG-GCTTHHHHHHHHHHCTTEEEEEEEEECCTTCCSEESSCCHHHHH------HHSCCTTSSEEEEEE
T ss_pred CcEEEEEEEcCCHH-HhhHHHHHHHHHHHCCCeEEEEEeCCCCccccCcCCccCHHHHH------HhcCCCCCCeEEEEE
Confidence 47899999999985 6 9999999998763333899999986432 46788854321 2232 245689999
Q ss_pred CChhhHHHHHHHHHHH
Q psy15286 636 GDCTMAEHVYQTLKYV 651 (707)
Q Consensus 636 Gp~~M~~~V~~~L~~i 651 (707)
||++|+++|++.|.+.
T Consensus 218 Gp~~m~~~v~~~l~~~ 233 (243)
T 2eix_A 218 GPPMMNKAMQGHLETL 233 (243)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc
Confidence 9999999999998765
No 30
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.59 E-value=4.7e-16 Score=161.03 Aligned_cols=81 Identities=16% Similarity=0.284 Sum_probs=59.9
Q ss_pred CCceEEEEecCCCCCc-ccHHHHHHHHhcC--CCceEEEEEecC---CC---CCccchhhHHHhhHHHHHHHhhc--CCc
Q psy15286 562 LGKMTLFFGCQLKTMD-LYSDEKSKMLDQK--VLTKSFLALSRE---PT---IPKTYVQDLMKKEASMLYRELIK--EGG 630 (707)
Q Consensus 562 ~g~i~LffG~R~~~~D-ly~dELe~~~~~g--~l~~l~~AfSRe---~~---~~k~YVQd~L~~~~~~l~~~L~~--~ga 630 (707)
.++++||||+|+.+ | +|.+||+++.++. .+ ++++++|++ ++ +.++||++.+.+ +.+.. .++
T Consensus 166 ~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~-~~~~~~s~~~~~~~~~~~~~g~v~~~~l~------~~l~~~~~~~ 237 (270)
T 2cnd_A 166 HTEMHLVYANRTED-DILLRDELDRWAAEYPDRL-KVWYVIDQVKRPEEGWKYSVGFVTEAVLR------EHVPEGGDDT 237 (270)
T ss_dssp CCEEEEEEEESCGG-GCTTHHHHHHHHHHCTTTE-EEEEEESCCSCGGGCCCSEESSCCHHHHH------HHSCCCSSSE
T ss_pred CcEEEEEEEcCCHH-HcchHHHHHHHHHHCcCcE-EEEEEECCCCCCCCCcccccccCCHHHHH------HhcCCCcCCE
Confidence 47899999999996 7 9999999998763 35 788999983 21 136788875432 22222 356
Q ss_pred EEEEeCChhhHHH-HHHHHHH
Q psy15286 631 HFYVCGDCTMAEH-VYQTLKY 650 (707)
Q Consensus 631 ~iYVCGp~~M~~~-V~~~L~~ 650 (707)
.+|+|||++|+++ +++.|.+
T Consensus 238 ~vyvCGp~~m~~~~~~~~L~~ 258 (270)
T 2cnd_A 238 LALACGPPPMIQFAISPNLEK 258 (270)
T ss_dssp EEEEECCHHHHHTTTHHHHHT
T ss_pred EEEEECCHHHHHHHHHHHHHH
Confidence 8999999999997 5777764
No 31
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.54 E-value=2.2e-15 Score=155.98 Aligned_cols=73 Identities=22% Similarity=0.221 Sum_probs=54.5
Q ss_pred CceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCC-CCccchhhHHHhhHHHHHHHhhcCCcEEEEeCChhh
Q psy15286 563 GKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPT-IPKTYVQDLMKKEASMLYRELIKEGGHFYVCGDCTM 640 (707)
Q Consensus 563 g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~-~~k~YVQd~L~~~~~~l~~~L~~~ga~iYVCGp~~M 640 (707)
.+++||||+|+++ | +|.+||+++... +++++ ++++. +.++||++.+.+. + ..++.+|+|||++|
T Consensus 137 ~~v~l~~~~r~~~-~~~~~~el~~l~~~----~~~~~-~~~~~~~~~g~v~~~l~~~-------~-~~~~~vyvCGp~~m 202 (262)
T 1ep3_B 137 CQMTILLGFASEN-VKILENEFSNLKNV----TLKIA-TDDGSYGTKGHVGMLMNEI-------D-FEVDALYTCGAPAM 202 (262)
T ss_dssp CEEEEEEEESSGG-GCCCHHHHHTSTTE----EEEEE-ETTCSSSEESCHHHHHHHC-------C-SCCSEEEEESCHHH
T ss_pred CeEEEEEEcCCHH-HhhhHHHHhhhccC----cEEEE-ECCCCCcceeehHHHHHhh-------c-cCCCEEEEECCHHH
Confidence 6799999999996 7 999999987543 34444 44432 2478999866532 2 34689999999999
Q ss_pred HHHHHHHHHH
Q psy15286 641 AEHVYQTLKY 650 (707)
Q Consensus 641 ~~~V~~~L~~ 650 (707)
+++|++ |.+
T Consensus 203 ~~~v~~-l~~ 211 (262)
T 1ep3_B 203 LKAVAK-KYD 211 (262)
T ss_dssp HHHHHH-HTT
T ss_pred HHHHHH-HHh
Confidence 999998 754
No 32
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.48 E-value=1.2e-14 Score=155.18 Aligned_cols=88 Identities=15% Similarity=0.178 Sum_probs=65.1
Q ss_pred CceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCCCCccchhhHHHhhHHHHHHHhhcCCcEEEEeCChhhH
Q psy15286 563 GKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPTIPKTYVQDLMKKEASMLYRELIKEGGHFYVCGDCTMA 641 (707)
Q Consensus 563 g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~~~k~YVQd~L~~~~~~l~~~L~~~ga~iYVCGp~~M~ 641 (707)
.+++||||+|+.+ + +|.+||+++.... ++++.++++..+.+.++++.+.. . ..+.++|+|||++|+
T Consensus 139 ~~v~l~~~~r~~~-~~~~~~el~~l~~~~---~~~~~~~~~~~~g~~~~~~ll~~--------~-~~~~~vyvCGP~~m~ 205 (321)
T 2pia_A 139 RSFRLYYLTRDPE-GTAFFDELTSDEWRS---DVKIHHDHGDPTKAFDFWSVFEK--------S-KPAQHVYCCGPQALM 205 (321)
T ss_dssp SEEEEEEEESCGG-GCTTHHHHHSTTTTT---TEEEEECTTCTTSCCCHHHHHSS--------C-CTTEEEEEESCHHHH
T ss_pred CcEEEEEEECChh-hhHHHHHHhcCccCC---eEEEEECCCcccCccCHHHHhcc--------c-CCCCEEEEECCHHHH
Confidence 6899999999996 6 9999999885222 45666777643335566654432 1 356799999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEecc
Q psy15286 642 EHVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFGI 683 (707)
Q Consensus 642 ~~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~~ 683 (707)
++|++.|.+ + ...|+|.|.|+.
T Consensus 206 ~~v~~~l~~-------~-------------~~~~i~~E~F~~ 227 (321)
T 2pia_A 206 DTVRDMTGH-------W-------------PSGTVHFESFGA 227 (321)
T ss_dssp HHHHHHTTT-------S-------------CTTCEEEECCCC
T ss_pred HHHHHHHHh-------C-------------CHhhEEEEecCC
Confidence 999988876 1 246899999974
No 33
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=98.99 E-value=5.3e-11 Score=115.40 Aligned_cols=90 Identities=13% Similarity=0.172 Sum_probs=56.6
Q ss_pred cCCceEEEEecCCCCCcc-cHHHHHHHHhc------C-CCceEEEEEecCCCC--Cccchhh-----HH----------H
Q psy15286 561 ELGKMTLFFGCQLKTMDL-YSDEKSKMLDQ------K-VLTKSFLALSREPTI--PKTYVQD-----LM----------K 615 (707)
Q Consensus 561 ~~g~i~LffG~R~~~~Dl-y~dELe~~~~~------g-~l~~l~~AfSRe~~~--~k~YVQd-----~L----------~ 615 (707)
..++++||||+|+.+..+ |.+||+++.+. + .+ ++++++|++... .+.|++. .+ +
T Consensus 51 ~~~~v~l~~~~r~~~~~~w~~~~l~~l~~~~~~~~~~~~~-~~~~~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gR 129 (186)
T 3a1f_A 51 KLKKIYFYWLCRDTHAFEWFADLLQLLESQMQERNNAGFL-SYNIYLTGWDESQANHFAVHHDEEKDVITGLKQKTLYGR 129 (186)
T ss_dssp CCCEEEEEEEESCTTTTHHHHHHHHHHHHHHHHTTCTTSE-EEEEEETTC-----------------------CCEEESC
T ss_pred CCcEEEEEEEECCcchHHHHHHHHHHHHHHHhhccCCCeE-EEEEEEcCCCCCcccceeeccccccccCCCCccccccCC
Confidence 457899999999996446 99999999774 2 45 789999986321 1122221 00 0
Q ss_pred hhHHHHHHHhh----cCCcEEEEeCChhhHHHHHHHHHHH
Q psy15286 616 KEASMLYRELI----KEGGHFYVCGDCTMAEHVYQTLKYV 651 (707)
Q Consensus 616 ~~~~~l~~~L~----~~ga~iYVCGp~~M~~~V~~~L~~i 651 (707)
-+.+.+.+.+. ..+..||+|||++|+++|++++.+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~v~~CGP~~m~~~v~~~l~~~ 169 (186)
T 3a1f_A 130 PNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISN 169 (186)
T ss_dssp CCHHHHHHHHHHHSTTCEEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCCcEEEEEeCCHHHHHHHHHHHHHh
Confidence 01111212111 2356899999999999999998775
No 34
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=98.90 E-value=3.8e-10 Score=116.13 Aligned_cols=96 Identities=4% Similarity=0.001 Sum_probs=54.7
Q ss_pred CceEEEEecCCCCCcccHHHHHHHHhcCCCceEEEEEecCCCCCccchhhHHHhhHHHHHHHhhcCCcEEEEeCChhhHH
Q psy15286 563 GKMTLFFGCQLKTMDLYSDEKSKMLDQKVLTKSFLALSREPTIPKTYVQDLMKKEASMLYRELIKEGGHFYVCGDCTMAE 642 (707)
Q Consensus 563 g~i~LffG~R~~~~Dly~dELe~~~~~g~l~~l~~AfSRe~~~~k~YVQd~L~~~~~~l~~~L~~~ga~iYVCGp~~M~~ 642 (707)
.++.+|+|+|+.+ |++ +|+ ....+ +++.+++.+.......+.+.+.+. .+...+.++|+|||++||+
T Consensus 138 ~~~~~~~~~~~~~-d~~--~l~---~~~~~-~v~~~~~~~~~~~g~~~~~~l~~~------~~~~~~~~vy~CGP~~m~~ 204 (252)
T 2gpj_A 138 AVGYAVIEVLSEA-DIQ--PLV---HPEHV-ELHWVINPEADPEGRPLVERIAQL------PWLAGEPAVWIACEFNSMR 204 (252)
T ss_dssp CEEEEEEEESSGG-GCC--CCC---CCTEE-EEEEEECSSCCTTCHHHHHHHTTS------CCCSSCEEEEEEEEHHHHH
T ss_pred CcEEEEEEECCHH-Hhh--ccc---CCCCc-EEEEEeCCCCCcccHHHHHHHHhc------cCCCCCcEEEEEcCHHHHH
Confidence 3678889999874 532 121 11223 566666654321012233322210 0112356899999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCcEEEEEecccccch
Q psy15286 643 HVYQTLKYVFQHEGNLTEQNAEKLLLRLRDENRYHEDIFGITLRTA 688 (707)
Q Consensus 643 ~V~~~L~~il~~~~~~~~~~a~~~l~~L~~~gRy~~Dvw~~~~~~~ 688 (707)
+|++.|.. +.|++ ..|++.|.|...=++.
T Consensus 205 av~~~l~~----~~G~~-------------~~~i~~e~fw~~g~~~ 233 (252)
T 2gpj_A 205 ALRRHFKQ----AHALP-------------KSHFYTSSYWKIGCNE 233 (252)
T ss_dssp HHHHHHHH----HCCCC-------------GGGEEEEEEECTTCCH
T ss_pred HHHHHHHH----hcCCC-------------HHHeEEEEEcCCCCCc
Confidence 99988862 13563 5689999986433333
No 35
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=98.83 E-value=2.7e-10 Score=109.38 Aligned_cols=78 Identities=9% Similarity=0.106 Sum_probs=52.3
Q ss_pred CceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCC-------CCccchhhHHHhhHHHHHHHhhcCCcEEEE
Q psy15286 563 GKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPT-------IPKTYVQDLMKKEASMLYRELIKEGGHFYV 634 (707)
Q Consensus 563 g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~-------~~k~YVQd~L~~~~~~l~~~L~~~ga~iYV 634 (707)
.+++|| |+|+++ | +|.+||+++.++ + .+..+++++.. +.+++|++.+.+. + . ..+...||+
T Consensus 50 ~~v~l~-g~r~~~-d~~~~~el~~l~~~--~-~~~~v~~~~~~~~~~~~~g~~G~v~~~l~~~---l-~--~~~~~~vy~ 118 (158)
T 3lrx_A 50 NDVTTL-HVTFEP-MVILKEELEKAVTR--H-IVEPVPLNPNQDFLANMKNVSQRLKEKVREL---L-E--SEDWDLVFM 118 (158)
T ss_dssp CEEEEE-EECBGG-GCCSHHHHHHHSSE--E-EECCBCCCTTSCHHHHHHHHHHHHHHHHHHH---H-H--HSCCSEEEE
T ss_pred CcEEEE-EeCCHH-HhhHHHHHHHHHhc--e-EEEEeeccccccCCCCCCCCcccccHHHHHh---h-c--cCCCCEEEE
Confidence 378999 999996 6 999999998642 2 23333444321 1246676654331 1 1 124568999
Q ss_pred eCChhhHHHHHHHHHHH
Q psy15286 635 CGDCTMAEHVYQTLKYV 651 (707)
Q Consensus 635 CGp~~M~~~V~~~L~~i 651 (707)
|||++|+++|.+.+.+.
T Consensus 119 CGP~~mm~~v~~~l~~~ 135 (158)
T 3lrx_A 119 VGPVGDQKQVFEVVKEY 135 (158)
T ss_dssp ESCHHHHHHHHHHHGGG
T ss_pred ECCHHHHHHHHHHHHHc
Confidence 99999999999887654
No 36
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=98.73 E-value=7.7e-10 Score=104.37 Aligned_cols=77 Identities=9% Similarity=0.102 Sum_probs=52.8
Q ss_pred CceEEEEecCCCCCc-ccHHHHHHHHhcCCCceEEEEEecCCC-------CCccchhhHHHhhHHHHHHHhh-cCCcEEE
Q psy15286 563 GKMTLFFGCQLKTMD-LYSDEKSKMLDQKVLTKSFLALSREPT-------IPKTYVQDLMKKEASMLYRELI-KEGGHFY 633 (707)
Q Consensus 563 g~i~LffG~R~~~~D-ly~dELe~~~~~g~l~~l~~AfSRe~~-------~~k~YVQd~L~~~~~~l~~~L~-~~ga~iY 633 (707)
.++.|+ |+|+++ | +|.+||+++.++ + .+..+++++.. +.+++|.+.+.+ .+. .+...+|
T Consensus 45 ~~v~l~-g~R~~~-~~~~~~el~~l~~~--~-~~~~~~~~~~~~~~d~~~g~~G~v~~~l~~-------~~~~~~~~~vy 112 (142)
T 3lyu_A 45 NDVTTL-HVTFEP-MVILKEELEKAVTR--H-IVEPVPLNPNQDFLANMKNVSQRLKEKVRE-------LLESEDWDLVF 112 (142)
T ss_dssp CEEEEE-EEEEGG-GCCSHHHHHTTSSE--E-EEEEECCCTTSCHHHHHHHHHHHHHHHHHH-------HHHSSCCSEEE
T ss_pred CcEEEE-EeCCHH-HhhHHHHHHHHHhh--e-EEEEeecccccCCCCCCCCCccchhHHHHH-------hcccCCCCEEE
Confidence 368999 999995 6 999999987542 2 34444555321 124566655433 222 2446899
Q ss_pred EeCChhhHHHHHHHHHHH
Q psy15286 634 VCGDCTMAEHVYQTLKYV 651 (707)
Q Consensus 634 VCGp~~M~~~V~~~L~~i 651 (707)
+|||++|+++|.+.+.+.
T Consensus 113 ~CGP~~Mm~av~~~l~~~ 130 (142)
T 3lyu_A 113 MVGPVGDQKQVFEVVKEY 130 (142)
T ss_dssp EESCHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHc
Confidence 999999999999988775
No 37
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=98.61 E-value=2.5e-08 Score=111.34 Aligned_cols=81 Identities=35% Similarity=0.559 Sum_probs=71.4
Q ss_pred cccccccccccHHHHhhhCCCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeeccc-ccCccCccccccc
Q psy15286 308 YEDWRHWRFPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQ-GLSKVHSRKVWQC 386 (707)
Q Consensus 308 cS~~~~~~~~~~~d~l~~fps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~-~~~~~~~~~~~~~ 386 (707)
+..|+...+++++|||.+||||++|++.|++.+++.++|.|||+||+..+|+++||+|++|.|.+. +....|.++.|++
T Consensus 197 ~~~~~~~~~~~ildvL~~fps~~~p~~~ll~~lp~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~~r~~~G~~S~~L~ 276 (458)
T 3qfs_A 197 YLSWVVEARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLR 276 (458)
T ss_dssp HHHHTTTTTCCHHHHHHHSTTBCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHH
T ss_pred HHHHHhhcCCCHHHHHHhCCccCCCHHHHHhhCCCCcceeEeeccCcccCCCEEEEEEEEEEecCCCCCCCCCchhHHHH
Confidence 446677778999999999999999999999999999999999999999999999999999999864 3455677888877
Q ss_pred cc
Q psy15286 387 PL 388 (707)
Q Consensus 387 ~~ 388 (707)
.+
T Consensus 277 ~l 278 (458)
T 3qfs_A 277 AK 278 (458)
T ss_dssp TC
T ss_pred hh
Confidence 54
No 38
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=98.48 E-value=6.7e-08 Score=107.33 Aligned_cols=106 Identities=38% Similarity=0.678 Sum_probs=81.6
Q ss_pred cccCCCCcccccccCchhhhhhhhhhccCCCCCCCchhhhhhhccccCCcccccccccccCCChhhHhhhhhhccccCCC
Q psy15286 441 CAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMELQVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTP 520 (707)
Q Consensus 441 ~~i~~Gt~~~~~~~~~~~~~~~~~~~~~~~GiAPfr~~~~~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p 520 (707)
..+.||.|++|+|.|..+.|..+|.+++. +..+..+++++..+++.++.+....|..+.+.|++.++++|++|+||+.|
T Consensus 63 ~~Y~~GD~l~V~p~N~~~~V~~~l~~l~~-~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~p~~tl~~~l~~~~di~~~ 141 (435)
T 1f20_A 63 LQYQPGDHLGVFPGNHEDLVNALIERLED-APPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTP 141 (435)
T ss_dssp GCCCTTCEEEECCCCCHHHHHHHHTTBSS-CCCTTSCEEEEEEEEESSSTTCEEEEEECCSSCSBCHHHHHHHTBCCSSC
T ss_pred CcCCCCCEEEEEecCCHHHHHHHHHHhCC-CCCCCeEEEEeccccccCCCCccccccccCCCCCccHHHHHHhceecCCC
Confidence 45999999999999999999999999942 22344444454444433333221233333566778899999999999999
Q ss_pred CChhhhhhhhcccCCcchHHHHHHHHH
Q psy15286 521 PPPALLQFFATFATAPDDQEILTLLAT 547 (707)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (707)
|+..++..+|.|++++.+++++..+++
T Consensus 142 p~~~~l~~la~~~~~~~~k~~L~~l~~ 168 (435)
T 1f20_A 142 PTPLQLQQFASLATNEKEKQRLLVLSK 168 (435)
T ss_dssp CCHHHHHHHHTTBCCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHCCCHHHHHHHHHhhc
Confidence 999999999999999999999988875
No 39
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=98.48 E-value=8e-08 Score=111.24 Aligned_cols=82 Identities=34% Similarity=0.547 Sum_probs=71.9
Q ss_pred ccccccccccccHHHHhhhCCCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeeccc-ccCccCcccccc
Q psy15286 307 AYEDWRHWRFPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQ-GLSKVHSRKVWQ 385 (707)
Q Consensus 307 lcS~~~~~~~~~~~d~l~~fps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~-~~~~~~~~~~~~ 385 (707)
.+..|+...+++++|||.+||++++|++.|+..+++.++|.|||+||+..+|+++||+|++|.|++. +....|.++.|+
T Consensus 356 ~~~~~~~~~~~~i~dvL~~fps~~~p~~~l~~~lp~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L 435 (618)
T 3qe2_A 356 LYLSWVVEARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWL 435 (618)
T ss_dssp HHHHHTTTTTCCHHHHHHHSTTBCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHH
T ss_pred HHHHHHhhcCCCHHHHHHhCCccCCCHHHHHHhccccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHH
Confidence 3456777788999999999999999999999999999999999999999999999999999999863 344567788887
Q ss_pred ccc
Q psy15286 386 CPL 388 (707)
Q Consensus 386 ~~~ 388 (707)
+.+
T Consensus 436 ~~l 438 (618)
T 3qe2_A 436 RAK 438 (618)
T ss_dssp HTC
T ss_pred Hhh
Confidence 754
No 40
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=98.45 E-value=1.3e-07 Score=103.75 Aligned_cols=79 Identities=27% Similarity=0.381 Sum_probs=66.6
Q ss_pred cccccccccHHHHhhhCCCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeecccc-c-CccCcccccccc
Q psy15286 310 DWRHWRFPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQG-L-SKVHSRKVWQCP 387 (707)
Q Consensus 310 ~~~~~~~~~~~d~l~~fps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~-~-~~~~~~~~~~~~ 387 (707)
.|+...+++++|||.+||++++|+++|+..++++++|+|||+||+..+|+++||+|.+|.+++.. . ...|.++.|++.
T Consensus 136 ~~~~~~~~~~ldvL~~fps~~~p~~~~l~~lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~ 215 (393)
T 4dql_A 136 EQVLAKRLTMLELLEKYPACEMKFSEFIALLPSIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAE 215 (393)
T ss_dssp HHTTTTTCBHHHHHHHCTTCCCCHHHHHHTSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHH
T ss_pred HHHhccCCCHHHHHHhCCCCCCCHHHHHHhCCCCcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHh
Confidence 45556678999999999999999999999999999999999999999999999999999997532 1 223667777765
Q ss_pred c
Q psy15286 388 L 388 (707)
Q Consensus 388 ~ 388 (707)
+
T Consensus 216 l 216 (393)
T 4dql_A 216 L 216 (393)
T ss_dssp C
T ss_pred C
Confidence 3
No 41
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=98.45 E-value=9.4e-08 Score=96.58 Aligned_cols=69 Identities=38% Similarity=0.646 Sum_probs=47.4
Q ss_pred ChhccCceecccceeccCCCCcHHHHHHHHHHHHHHHHHHcCCCCCCcccccccccccccccCceeeec
Q psy15286 1 MLGELGGERLLKLRAGDEMCGQEQAFRSWAPEVFNVACETFCLDDDETLSDATQVISSVTLNASTVRFL 69 (707)
Q Consensus 1 ~l~~lGa~r~~~~g~gD~~~g~e~~f~~W~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (707)
+|++|||++++|+|+||++.|+|++|++|.+.+|++|++.|++++......+...-+...|.+.+||+.
T Consensus 148 ~L~~lGa~~l~~~g~~D~~~~~e~~~~~W~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 216 (219)
T 3hr4_A 148 KLSHLGASQLTPMGEGDELSGQEDAFRSWAVQTFKAACETFDVRGKQHIQIPKLYTSNVTWDPHHYRLV 216 (219)
T ss_dssp HHHHHTCEESSCCEEEETTSCHHHHHHHHHHHHHHHHHHHTTCTTGGGCCCCSTTC-------------
T ss_pred HHHHCCCCEeeCCEEEecCCCcHHHHHHHHHHHHHHHHHHcCCCcccccccCCcccCcCCCCcceeEee
Confidence 478999999999999999999999999999999999999999877654443332222346777777764
No 42
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=98.37 E-value=2.2e-07 Score=105.75 Aligned_cols=83 Identities=33% Similarity=0.522 Sum_probs=71.1
Q ss_pred cccccccccccccHHHHhhhCCCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeecccc---cCccCccc
Q psy15286 306 AAYEDWRHWRFPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQG---LSKVHSRK 382 (707)
Q Consensus 306 GlcS~~~~~~~~~~~d~l~~fps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~---~~~~~~~~ 382 (707)
..+..|+...+++++|||.+||||++|++.|+..++++++|+|||+|++..+++.+||+|.+|.|.+.. ....|.++
T Consensus 252 ~~~~~~~~~~~~~lldvL~~fps~~~p~~~ll~~lp~l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S 331 (539)
T 2qtl_A 252 ADYSRFVRDACACLLDLLLAFPSCQPPLSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCT 331 (539)
T ss_dssp HHHHHHTTTTTCCHHHHHHHSTTBCCCHHHHHHHSCBCCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHH
T ss_pred HHHHHHHhhcCCCHHHHHHhCCCcCCCHHHHHHhCcCCcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchh
Confidence 345567777889999999999999999999999999999999999999988999999999999996432 22457788
Q ss_pred cccccc
Q psy15286 383 VWQCPL 388 (707)
Q Consensus 383 ~~~~~~ 388 (707)
.|++.+
T Consensus 332 ~~L~~l 337 (539)
T 2qtl_A 332 GWLALL 337 (539)
T ss_dssp HHHHHH
T ss_pred hHHHHh
Confidence 888875
No 43
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=98.31 E-value=3e-07 Score=107.71 Aligned_cols=106 Identities=38% Similarity=0.678 Sum_probs=82.4
Q ss_pred cccCCCCcccccccCchhhhhhhhhhccCCCCCCCchhhhhhhccccCCcccccccccccCCChhhHhhhhhhccccCCC
Q psy15286 441 CAYEPGDHVGIFASNKWDLVSGILARLNLGGIDPDEPMELQVLSETHTSTEVIKSWKPHERLPRASLRTLLSRYLDITTP 520 (707)
Q Consensus 441 ~~i~~Gt~~~~~~~~~~~~~~~~~~~~~~~GiAPfr~~~~~~~~~~~~~~~~~~f~q~~~R~~~~~~~~~~~~~~~~~~p 520 (707)
..+.||.||+|+|.|..++|..+|.+++. +..+..+++++..+++.++.+...-|..+.+.|++.++++|++|+||+.|
T Consensus 284 ~~Y~~GD~l~V~P~N~~~~V~~~l~~l~~-~~~~d~~v~~~~~~~~~~p~~~~~~~~~~~~~p~~tl~~~l~~~lDi~~~ 362 (688)
T 1tll_A 284 LQYQPGDHLGVFPGNHEDLVNALIERLED-APPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTP 362 (688)
T ss_dssp GCCCTTCEEEECCCCCHHHHHHHHTTCSS-CCCSCSCEEEEEEEECCCSSSCCEEEEECCSSCSBCHHHHHHHTBCCSSC
T ss_pred CccCCCCEEEEecCCCHHHHHHHHHHhCC-CCCCCeEEEEeccccccCCCcccccccccCCCCCccHHHHHHhheeCCCC
Confidence 44999999999999999999999999941 22444444454444443333322234434566778999999999999999
Q ss_pred CChhhhhhhhcccCCcchHHHHHHHHH
Q psy15286 521 PPPALLQFFATFATAPDDQEILTLLAT 547 (707)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (707)
|+..++..+|.|++++.+++++..+++
T Consensus 363 p~~~~l~~la~~a~~~~ek~~L~~l~~ 389 (688)
T 1tll_A 363 PTPLQLQQFASLATNEKEKQRLLVLSK 389 (688)
T ss_dssp CCHHHHHHHHTTBCCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcCCHHHHHHHHHHhc
Confidence 999999999999999999999998875
No 44
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=98.02 E-value=1.7e-06 Score=101.19 Aligned_cols=83 Identities=20% Similarity=0.293 Sum_probs=73.1
Q ss_pred ccccccccccccHHHHhhhCC----CCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeecccc----cCcc
Q psy15286 307 AYEDWRHWRFPHLLEVLEQFP----SIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQG----LSKV 378 (707)
Q Consensus 307 lcS~~~~~~~~~~~d~l~~fp----s~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~----~~~~ 378 (707)
.+..|+...+++++|||.+|| ++++|+..|+..+++.++|+|||+||+..+|+++||+|++|.|++.. ....
T Consensus 387 ~~~~~~~~~~~~i~dvL~~fp~~~~s~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~ 466 (682)
T 2bpo_A 387 QFAVEITSKYFNIADALKYLSDGAKWDTVPMQFLVESVPQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVV 466 (682)
T ss_dssp HHHHHTGGGTCCHHHHHHHHHTTCCCTTSCHHHHHHHSCBCCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEE
T ss_pred HHHHHHhcCCCCHHHHHHhccCcccccCCCHHHHHHhCcccccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccC
Confidence 445677778899999999999 99999999999999999999999999998999999999999998652 4456
Q ss_pred Ccccccccccc
Q psy15286 379 HSRKVWQCPLI 389 (707)
Q Consensus 379 ~~~~~~~~~~~ 389 (707)
|.++.|++.+.
T Consensus 467 G~~S~~L~~l~ 477 (682)
T 2bpo_A 467 GVTTNLLRNIQ 477 (682)
T ss_dssp CHHHHHHHHHH
T ss_pred ccccHHHHhcc
Confidence 88999998754
No 45
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=97.97 E-value=6.7e-06 Score=89.51 Aligned_cols=71 Identities=31% Similarity=0.533 Sum_probs=64.1
Q ss_pred cccHHHHhhhCCCCCCChHHHHhccCCCCceeEEecCCCCCCCCcceeEEEEEeecccccCccCcccccccc
Q psy15286 316 FPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFYSISSSPLAHPNEIHLTVAVVTYRTQGLSKVHSRKVWQCP 387 (707)
Q Consensus 316 ~~~~~d~l~~fps~~~~~~~lL~~L~~g~~~~~sIsSs~~~~p~~i~l~v~~V~~~~~~~~~~~~~~~~~~~ 387 (707)
.++++|+|.+||+ ++++++++..++++++|+|||+|++..+++.++|+|.+|.|++.+....|.++.|++.
T Consensus 132 ~~~~~~vl~~~p~-~~~~Gq~v~l~~~~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~G~~S~~L~~ 202 (374)
T 1ddg_A 132 TTPIVDMVRFSPA-QLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLAD 202 (374)
T ss_dssp HSCHHHHHHHSCC-CCCHHHHHHHSCBCCCEEEEBCCCTTTSCSEEEEEEEECEEEETTEEEECHHHHHHHH
T ss_pred CCCHHHHHHHCCC-CCCHHHHHhhccCCCCccceecCCCCCCCCEEEEEEEEEEeecCCCCCCCCchHHHHh
Confidence 5899999999999 9999999999889999999999999888999999999999988765566778888875
No 46
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=92.74 E-value=0.053 Score=53.13 Aligned_cols=38 Identities=16% Similarity=0.317 Sum_probs=33.9
Q ss_pred ChhccCceecccceeccCCCCcHHHHHHHHHHHHHHHH
Q psy15286 1 MLGELGGERLLKLRAGDEMCGQEQAFRSWAPEVFNVAC 38 (707)
Q Consensus 1 ~l~~lGa~r~~~~g~gD~~~g~e~~f~~W~~~l~~~l~ 38 (707)
+|+++||+++.+++.+|+..+.+++|+.|.+.+|++|.
T Consensus 130 ~L~~~Ga~~v~~~~~~d~~~d~e~~~~~w~~~l~~~l~ 167 (191)
T 1bvy_F 130 TLAAKGAENIADRGEADASDDFEGTYEEWREHMWSDVA 167 (191)
T ss_dssp HHHTTTCCCCEEEEEEETTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCeEeeccEEEecCCChHHHHHHHHHHHHHHhc
Confidence 47899999999999999855778889999999999985
No 47
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=72.52 E-value=7.8 Score=39.90 Aligned_cols=50 Identities=14% Similarity=0.269 Sum_probs=41.6
Q ss_pred cCCCCcEEEEEeEEeeccCCCCCCCcEEEEEeeCCCCCCCCCCCeeEEccc
Q psy15286 84 VHSRKVWQCPLIKKWNLYGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFAS 134 (707)
Q Consensus 84 ~~~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~~l~Y~pGD~l~I~P~ 134 (707)
+.+..++.++|++++.++. ++...+++++.|+.+..+.|+||.++.|...
T Consensus 23 ~~~~~~~~~~V~~~~~~t~-~~~~~~v~~~~l~~~~~~~~~pGQ~v~l~~~ 72 (311)
T 3lo8_A 23 YKPKEPFTATIVSVESLVG-PKAPGETCHIVIDHGGNVPYWEGQSYGVIPP 72 (311)
T ss_dssp BBTTBCEEEEEEEEEECSC-TTSSSCEEEEEEECTTSSCCCTTCEEEEECS
T ss_pred cCCCCCeEEEEEeeEeccC-CCCCCccEEEEEeCCCCCcccCCCEEEEeCC
Confidence 3456778999999999996 5555789999999877799999999988753
No 48
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=37.22 E-value=44 Score=33.23 Aligned_cols=39 Identities=8% Similarity=0.110 Sum_probs=33.0
Q ss_pred CcEEEEEeEEeeccCCCCCCCcEEEEEeeCCCCCCCCCCCeeEEc
Q psy15286 88 KVWQCPLIKKWNLYGSQPVARTTLGIQMRKPHDCAYEPGDHVGIF 132 (707)
Q Consensus 88 ~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~~l~Y~pGD~l~I~ 132 (707)
+...++|++++.+++ +++.++|..+....|+||.++.|.
T Consensus 18 ~~~~~~V~~~~~~~~------~~~~~~l~~~~~~~~~pGQ~v~l~ 56 (271)
T 4fk8_A 18 KFDTATVLSVHHWTD------TLFSFTCTRDQALRFNNGEFTMVG 56 (271)
T ss_dssp CEEEEEEEEEEEEET------TEEEEEECCCTTCCCCTTCEEEEE
T ss_pred cceeEEEEEEEEcCC------CEEEEEEEcCCCCCcCCCCEEEEE
Confidence 456899999999997 588888987777899999999875
No 49
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=36.92 E-value=51 Score=32.46 Aligned_cols=39 Identities=10% Similarity=0.162 Sum_probs=32.1
Q ss_pred cEEEEEeEEeeccCCCCCCCcEEEEEeeCCCCCCCCCCCeeEEcc
Q psy15286 89 VWQCPLIKKWNLYGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFA 133 (707)
Q Consensus 89 ~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~~l~Y~pGD~l~I~P 133 (707)
...++|++++.+++ +++.++|..+....|+||.++.|..
T Consensus 3 ~~~~~V~~~~~~~~------~~~~l~l~~~~~~~~~pGq~v~l~~ 41 (257)
T 2qdx_A 3 LYTERVLSVHHWND------TLFSFKTTRNPGLRFKTGQFVMIGL 41 (257)
T ss_dssp SEEEEEEEEEEEET------TEEEEEEECCTTCCCCTTCEEEEEE
T ss_pred eEEEEEEEEEEcCC------CeEEEEEeCCCCCccCCCCEEEEEe
Confidence 45789999999996 5788888877678899999998853
No 50
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=34.14 E-value=48 Score=32.01 Aligned_cols=39 Identities=8% Similarity=0.201 Sum_probs=31.4
Q ss_pred EEEEEeEEeeccCCCCCCCcEEEEEeeCCCCCCCCCCCeeEEccc
Q psy15286 90 WQCPLIKKWNLYGSQPVARTTLGIQMRKPHDCAYEPGDHVGIFAS 134 (707)
Q Consensus 90 ~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~~l~Y~pGD~l~I~P~ 134 (707)
+.++|++++.+++ +++.++|+.+..+.|+||.++.|...
T Consensus 3 ~~~~V~~~~~~~~------~~~~l~l~~~~~~~~~pGq~v~l~~~ 41 (232)
T 1qfj_A 3 LSCKVTSVEAITD------TVYRVRIVPDAAFSFRAGQYLMVVMD 41 (232)
T ss_dssp EEEEEEEEEESSS------SCEEEEEEESSCCCCCTTCEEEEESS
T ss_pred eEEEEEEEEecCC------CEEEEEEecCCCCCcCCCCEEEEECC
Confidence 4688999999986 46778887666789999999998743
No 51
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=33.48 E-value=66 Score=32.19 Aligned_cols=41 Identities=17% Similarity=0.380 Sum_probs=33.3
Q ss_pred CcEEEEEeEEeeccCCCCCCCcEEEEEeeCCC--CCCCCCCCeeEEccc
Q psy15286 88 KVWQCPLIKKWNLYGSQPVARTTLGIQMRKPH--DCAYEPGDHVGIFAS 134 (707)
Q Consensus 88 ~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~--~l~Y~pGD~l~I~P~ 134 (707)
+.+.++|++++.+++ +++.++|..+. .+.|+||.++.|.-+
T Consensus 8 ~~~~~~V~~~~~~t~------~~~~l~l~~~~~~~~~~~pGQ~v~l~~p 50 (290)
T 2r6h_A 8 KEWECEVLSNKNVST------FIKEFVVKLPEGETMNFKSGSYAQIKIP 50 (290)
T ss_dssp CEEEEEEEEEEESSS------SEEEEEEECSTTCCCCCCTTCEEEEEEC
T ss_pred eEEEEEEEEeeecCC------CeEEEEEEcCCCCccccCCCceEEEEcc
Confidence 346799999999997 58888998743 678999999999754
No 52
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=31.88 E-value=63 Score=32.25 Aligned_cols=37 Identities=14% Similarity=0.179 Sum_probs=31.5
Q ss_pred EEEEEeEEeeccCCCCCCCcEEEEEeeCCCCCCCCCCCeeEEc
Q psy15286 90 WQCPLIKKWNLYGSQPVARTTLGIQMRKPHDCAYEPGDHVGIF 132 (707)
Q Consensus 90 ~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~~l~Y~pGD~l~I~ 132 (707)
+.++|++++.+++ +++.++|..+....|+||.++.|.
T Consensus 17 ~~~~V~~~~~~~~------~~~~l~l~~~~~~~~~pGQ~v~l~ 53 (272)
T 2bgi_A 17 DAQTVTSVRHWTD------TLFSFRVTRPQTLRFRSGEFVMIG 53 (272)
T ss_dssp EEEEEEEEEEEET------TEEEEEEECCTTCCCCTTCEEEEE
T ss_pred EEEEEEEEEEcCC------CEEEEEEeCCCCCccCCCCEEEEE
Confidence 5799999999997 578888887767889999999885
No 53
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=30.42 E-value=55 Score=32.06 Aligned_cols=42 Identities=14% Similarity=0.317 Sum_probs=33.9
Q ss_pred CCCcEEEEEeEEeeccCCCCCCCcEEEEEeeC-C-C----CCCCCCCCeeEEcc
Q psy15286 86 SRKVWQCPLIKKWNLYGSQPVARTTLGIQMRK-P-H----DCAYEPGDHVGIFA 133 (707)
Q Consensus 86 ~~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l-~-~----~l~Y~pGD~l~I~P 133 (707)
+.+.+.++|++++.+++ +++.++|.. + . ...|+||.++.|..
T Consensus 7 ~~~~~~~~V~~~~~~~~------~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~ 54 (250)
T 1tvc_A 7 EVGSFEAEVVGLNWVSS------NTVQFLLQKRPDECGNRGVKFEPGQFMDLTI 54 (250)
T ss_dssp CSSEEEEEBCCCEEEET------TEEEEEECSSTTSSSSSCCSCCSCCEEEECT
T ss_pred CcceEEEEEEEEEEcCC------CeEEEEEEecCCCCcccccCcCCCcEEEEEe
Confidence 34457899999999986 588899987 6 4 47899999999875
No 54
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=29.62 E-value=86 Score=32.20 Aligned_cols=42 Identities=10% Similarity=0.226 Sum_probs=33.7
Q ss_pred CCcEEEEEeEEeeccCCCCCCCcEEEEEeeCCCC---CCCCCCCeeEEccc
Q psy15286 87 RKVWQCPLIKKWNLYGSQPVARTTLGIQMRKPHD---CAYEPGDHVGIFAS 134 (707)
Q Consensus 87 ~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~~---l~Y~pGD~l~I~P~ 134 (707)
.....++|++++.+++ +++.++|..+.+ ..|+||.++.|...
T Consensus 6 ~~~~~~~V~~~~~~t~------~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~ 50 (321)
T 2pia_A 6 DGFLRLKIASKEKIAR------DIWSFELTDPQGAPLPPFEAGANLTVAVP 50 (321)
T ss_dssp TTCEEEEEEEEEEEET------TEEEEEEECTTCCCCCCCCTTCEEEEECT
T ss_pred CCcEEEEEEEEEEcCC------CEEEEEEEcCCCCcCCCCCCCCEEEEECC
Confidence 4457899999999997 588899987543 37999999999754
No 55
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=28.52 E-value=89 Score=30.37 Aligned_cols=37 Identities=8% Similarity=0.043 Sum_probs=30.0
Q ss_pred cEEEEEeEEeeccCCCCCCCcEEEEEeeCCCCCCCCCCCeeEEc
Q psy15286 89 VWQCPLIKKWNLYGSQPVARTTLGIQMRKPHDCAYEPGDHVGIF 132 (707)
Q Consensus 89 ~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~~l~Y~pGD~l~I~ 132 (707)
...++|++++.+++ +++.++|. +....|+||.++.|.
T Consensus 4 ~~~~~V~~~~~~~~------~~~~l~l~-~~~~~~~pGq~v~l~ 40 (248)
T 1fdr_A 4 WVTGKVTKVQNWTD------ALFSLTVH-APVLPFTAGQFTKLG 40 (248)
T ss_dssp EEEEEEEEEEECSS------SEEEEEEE-CCCCCCCTTCEEEEE
T ss_pred eEEEEEEEEEEcCC------CEEEEEEe-CCCCCcCCCCcEEEE
Confidence 45789999999986 47788886 556789999999875
No 56
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=27.96 E-value=1e+02 Score=30.57 Aligned_cols=53 Identities=13% Similarity=0.070 Sum_probs=40.4
Q ss_pred CCcccccCCCCCCCCeEEEEEEEEEeeccCCCCCccccccccccccccccHHHHhhhCCCCCCChHHHHhccCCCCceeE
Q psy15286 269 PRFYSISSSPLAHPNEIHLTVAVVTYRTQGASIHSDSAAYEDWRHWRFPHLLEVLEQFPSIHLPPALLVAQLTPLQPRFY 348 (707)
Q Consensus 269 PR~YSIsSSp~~~p~~i~ltvavv~y~t~~~~~~~r~GlcS~~~~~~~~~~~d~l~~fps~~~~~~~lL~~L~~g~~~~~ 348 (707)
+|.|||+|+|. .++.++|+|.++.+.+.. +....|.+|+| |..+++|+.+.+
T Consensus 65 ~R~ySi~s~~~-~~~~~~l~vk~~~~~~~~--~~~~~G~~S~~-------------------------L~~l~~Gd~v~v 116 (275)
T 1umk_A 65 VRPYTPISSDD-DKGFVDLVIKVYFKDTHP--KFPAGGKMSQY-------------------------LESMQIGDTIEF 116 (275)
T ss_dssp EEEECCSSCTT-CCSEEEEEEECCCSSSBT--TBTTCCHHHHH-------------------------HHHCCTTCEEEE
T ss_pred EeccccCCccC-CCCeEEEEEEEeccCccc--ccCCCChhHHH-------------------------HhcCCCCCEEEE
Confidence 47899999875 457899999888776543 33456999999 888999987654
Q ss_pred E
Q psy15286 349 S 349 (707)
Q Consensus 349 s 349 (707)
.
T Consensus 117 ~ 117 (275)
T 1umk_A 117 R 117 (275)
T ss_dssp E
T ss_pred E
Confidence 3
No 57
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=27.36 E-value=97 Score=29.92 Aligned_cols=40 Identities=15% Similarity=0.118 Sum_probs=31.6
Q ss_pred cEEEEEeEEeeccCCCCCCCcEEEEEeeCCC---CCCCCCCCeeEEccc
Q psy15286 89 VWQCPLIKKWNLYGSQPVARTTLGIQMRKPH---DCAYEPGDHVGIFAS 134 (707)
Q Consensus 89 ~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~---~l~Y~pGD~l~I~P~ 134 (707)
...++|++++.+++ +++.++|+.+. ...|+||.++.|.-.
T Consensus 3 ~~~~~V~~~~~~~~------~~~~~~l~~~~~~~~~~~~pGq~v~l~~~ 45 (243)
T 4eh1_A 3 GRTFVVREKQVESA------YVTSFVLVPADGGAVLDYQPGQYIGIEVT 45 (243)
T ss_dssp CEEEEEEEEEECSS------SEEEEEEEESSCSCCCCCCTTCEEEEEEC
T ss_pred cEEEEEEEEEEcCC------CeEEEEEEeCCCCcCCCcCCCCEEEEEEe
Confidence 35689999999987 57888888643 378999999998754
No 58
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=27.24 E-value=1e+02 Score=29.83 Aligned_cols=41 Identities=17% Similarity=0.096 Sum_probs=31.7
Q ss_pred CCcEEEEEeEEeeccCCCCCCCcEEEEEeeCCC---CCCCCCCCeeEEcc
Q psy15286 87 RKVWQCPLIKKWNLYGSQPVARTTLGIQMRKPH---DCAYEPGDHVGIFA 133 (707)
Q Consensus 87 ~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~---~l~Y~pGD~l~I~P 133 (707)
.....++|++++.+++ +++.++|.++. ...|+||.++.|..
T Consensus 9 ~~~~~~~v~~~~~~t~------~~~~~~l~~~~~~~~~~~~pGq~v~l~~ 52 (243)
T 2eix_A 9 NEYKKFMLREKQIINH------NTRLFRFNLHHPEDVVGLPIGQHMSVKA 52 (243)
T ss_dssp SSCEEEEEEEEEEEET------TEEEEEEECSSTTCCCCCCTTCEEEEEE
T ss_pred CceEEEEEEEEEEeCC------CeEEEEEEcCCCCcccCcCCceEEEEEE
Confidence 4456899999999997 47778888743 46899999987753
No 59
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=25.91 E-value=94 Score=30.64 Aligned_cols=40 Identities=20% Similarity=0.243 Sum_probs=31.2
Q ss_pred CCcEEEEEeEEeeccCCCCCCCcEEEEEeeCCC---CCCCCCCCeeEEc
Q psy15286 87 RKVWQCPLIKKWNLYGSQPVARTTLGIQMRKPH---DCAYEPGDHVGIF 132 (707)
Q Consensus 87 ~~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~---~l~Y~pGD~l~I~ 132 (707)
.....++|++++.+++ +++.++|..+. ...|+||.++.|.
T Consensus 10 ~~~~~~~v~~~~~~~~------~~~~~~l~~~~~~~~~~~~pGQ~v~l~ 52 (270)
T 2cnd_A 10 RGRIHCRLVAKKELSR------DVRLFRFSLPSPDQVLGLPIGKHIFVC 52 (270)
T ss_dssp -CCEEEEEEEEEEEET------TEEEEEEECSSTTCCCCCCTTCEEEEE
T ss_pred CceEEEEEEEEEEeCC------CeEEEEEECCCCccccCCCCCCEEEEE
Confidence 3457899999999997 57888888743 4679999998874
No 60
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=23.51 E-value=87 Score=30.96 Aligned_cols=39 Identities=8% Similarity=0.103 Sum_probs=31.3
Q ss_pred EEEEEeEEeeccCCCCCCCcEEEEEeeCCC-CCCCCCCCeeEEccc
Q psy15286 90 WQCPLIKKWNLYGSQPVARTTLGIQMRKPH-DCAYEPGDHVGIFAS 134 (707)
Q Consensus 90 ~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~-~l~Y~pGD~l~I~P~ 134 (707)
+.++|++++.+++ +++.++|+.+. ...|+||.++.|...
T Consensus 6 ~~~~V~~~~~~t~------~~~~l~l~~~~~~~~~~pGQ~v~l~~~ 45 (262)
T 1ep3_B 6 EMMTVVSQREVAY------NIFEMVLKGTLVDEMDLPGQFLHLAVP 45 (262)
T ss_dssp EEEEEEEEEEEET------TEEEEEEESGGGGGCCSTTCEEEECCS
T ss_pred cceEEEEEEEecC------CEEEEEEEcCcccccCCCCceEEEEcC
Confidence 3689999999997 57888888754 468999999988643
No 61
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=22.44 E-value=1.1e+02 Score=31.31 Aligned_cols=41 Identities=17% Similarity=0.259 Sum_probs=33.1
Q ss_pred CcEEEEEeEEeeccCCCCCCCcEEEEEeeCCC---CCCCCCCCeeEEccc
Q psy15286 88 KVWQCPLIKKWNLYGSQPVARTTLGIQMRKPH---DCAYEPGDHVGIFAS 134 (707)
Q Consensus 88 ~~~~a~V~~n~~Lt~~~~~~r~v~hiel~l~~---~l~Y~pGD~l~I~P~ 134 (707)
..+.++|++++.+++ +++.++|+.+. ...|+||.++.|...
T Consensus 107 ~~~~~~V~~~~~~~~------~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~ 150 (338)
T 1krh_A 107 HHFEGTLARVENLSD------STITFDIQLDDGQPDIHFLAGQYVNVTLP 150 (338)
T ss_dssp EEEEEEEEEEEESSS------SEEEEEEEECTTCCCCCCCTTCEEEEECT
T ss_pred eEEEEEEEEEEEcCC------CEEEEEEEeCCCCCCCCcCCCCeEEEEcC
Confidence 346789999999996 58888888754 588999999998743
No 62
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=21.62 E-value=47 Score=33.96 Aligned_cols=45 Identities=27% Similarity=0.379 Sum_probs=32.0
Q ss_pred CceeEEecCCCCC---CCCcceeEEEEEeecccc-cCccCccccccccc
Q psy15286 344 QPRFYSISSSPLA---HPNEIHLTVAVVTYRTQG-LSKVHSRKVWQCPL 388 (707)
Q Consensus 344 ~~~~~sIsSs~~~---~p~~i~l~v~~V~~~~~~-~~~~~~~~~~~~~~ 388 (707)
..|+|||+|++.. +++.++|+|..+.|.+.. ....|.++.|+|.+
T Consensus 87 ~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~G~~S~~L~~l 135 (310)
T 3vo2_A 87 KLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDL 135 (310)
T ss_dssp CCEEEECCSCTTTTTTSSSEEEEEEECCEEECTTSCEEECHHHHHHHTC
T ss_pred cceeeecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCcchhhHHhcC
Confidence 4689999998764 577899999988886532 22346677777753
Done!