Query psy15287
Match_columns 186
No_of_seqs 117 out of 483
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 17:14:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15287.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15287hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ut1_A Lethal(3)malignant brai 100.0 8.7E-58 3E-62 396.9 14.7 159 1-184 65-223 (324)
2 2biv_A SCML2 protein, sex COMB 100.0 2.8E-57 9.6E-62 380.0 16.1 150 1-175 91-242 (243)
3 2r58_A Polycomb protein SCM; M 100.0 6.3E-57 2.2E-61 381.7 16.4 155 1-180 63-219 (265)
4 1oz2_A Lethal(3)malignant brai 100.0 3.7E-57 1.3E-61 394.1 14.5 160 1-185 70-229 (331)
5 3ut1_A Lethal(3)malignant brai 100.0 4.3E-57 1.5E-61 392.5 14.4 151 1-179 172-322 (324)
6 1oz2_A Lethal(3)malignant brai 100.0 3.7E-56 1.3E-60 387.8 14.5 152 1-180 177-328 (331)
7 3feo_A MBT domain-containing p 100.0 6.6E-53 2.3E-57 378.7 14.7 146 2-175 285-433 (437)
8 3f70_A Lethal(3)malignant brai 100.0 1.5E-52 5.2E-57 377.7 15.1 154 1-182 288-444 (456)
9 3h6z_A Polycomb protein SFMBT; 100.0 2.3E-52 7.9E-57 375.8 16.0 146 2-175 298-447 (447)
10 3feo_A MBT domain-containing p 100.0 1.9E-46 6.5E-51 336.8 11.5 153 1-178 74-230 (437)
11 3f70_A Lethal(3)malignant brai 100.0 8.3E-46 2.8E-50 333.9 12.1 148 1-174 72-223 (456)
12 3h6z_A Polycomb protein SFMBT; 100.0 6.4E-46 2.2E-50 333.9 8.3 149 1-177 76-227 (447)
13 2biv_A SCML2 protein, sex COMB 100.0 2.5E-43 8.5E-48 295.4 11.5 136 22-184 6-141 (243)
14 2r58_A Polycomb protein SCM; M 100.0 1.6E-36 5.5E-41 256.7 11.6 112 50-184 2-113 (265)
15 1wjq_A KIAA1798 protein; MBT d 100.0 4.1E-35 1.4E-39 217.2 8.6 80 98-180 10-89 (107)
16 1wjr_A KIAA1617 protein; MBT d 100.0 5.8E-33 2E-37 211.9 4.9 87 97-184 7-94 (127)
17 2eqm_A PHD finger protein 20-l 99.9 6.3E-25 2.1E-29 157.6 9.2 73 97-172 15-87 (88)
18 1wjr_A KIAA1617 protein; MBT d 99.9 2.5E-24 8.5E-29 164.1 5.8 75 1-77 40-120 (127)
19 3sd4_A PHD finger protein 20; 99.9 3E-22 1E-26 137.5 7.9 60 96-160 7-68 (69)
20 1wjq_A KIAA1798 protein; MBT d 99.7 1.1E-18 3.6E-23 129.1 4.3 45 1-45 42-86 (107)
21 2eqm_A PHD finger protein 20-l 99.4 2.5E-13 8.7E-18 97.1 3.5 40 1-40 48-87 (88)
22 3sd4_A PHD finger protein 20; 98.8 1.9E-09 6.4E-14 73.4 3.0 28 1-28 41-68 (69)
23 3h8z_A FragIle X mental retard 97.7 7E-05 2.4E-09 56.6 6.9 58 99-160 58-117 (128)
24 2eko_A Histone acetyltransfera 97.5 0.00046 1.6E-08 48.7 8.0 65 97-164 5-75 (87)
25 2lcc_A AT-rich interactive dom 97.1 0.001 3.4E-08 45.8 5.4 54 100-155 4-61 (76)
26 2f5k_A MORF-related gene 15 is 97.0 0.0015 5.2E-08 47.4 5.8 51 97-153 18-72 (102)
27 1wgs_A MYST histone acetyltran 96.9 0.0035 1.2E-07 47.4 8.0 56 98-158 9-70 (133)
28 2ro0_A Histone acetyltransfera 96.9 0.003 1E-07 45.0 7.1 56 97-158 19-78 (92)
29 2rnz_A Histone acetyltransfera 96.5 0.01 3.6E-07 42.3 7.2 56 97-158 21-80 (94)
30 2lrq_A Protein MRG15, NUA4 com 95.0 0.0011 3.7E-08 46.6 0.0 51 97-153 8-62 (85)
31 3m9q_A Protein MALE-specific l 95.9 0.017 5.7E-07 41.7 6.0 54 97-153 15-79 (101)
32 3oa6_A MALE-specific lethal 3 95.8 0.02 6.9E-07 41.9 5.9 56 96-153 14-79 (110)
33 3m9p_A MALE-specific lethal 3 95.4 0.032 1.1E-06 40.9 5.7 54 96-152 14-78 (110)
34 3dlm_A Histone-lysine N-methyl 94.0 0.18 6E-06 40.9 7.4 55 98-160 155-209 (213)
35 2bud_A Males-absent on the fir 93.5 0.51 1.7E-05 33.4 8.2 45 105-154 18-69 (92)
36 2k3y_A Chromatin modification- 92.1 0.31 1.1E-05 36.8 5.9 49 99-153 7-97 (136)
37 4hcz_A PHD finger protein 1; p 91.2 1.1 3.6E-05 29.0 6.8 45 100-152 2-48 (58)
38 2equ_A PHD finger protein 20-l 91.2 0.77 2.6E-05 31.0 6.6 41 97-140 5-46 (74)
39 2e5q_A PHD finger protein 19; 90.2 1.1 3.9E-05 29.3 6.3 47 98-152 4-52 (63)
40 2xk0_A Polycomb protein PCL; t 90.0 1.9 6.6E-05 28.7 7.5 48 98-153 12-59 (69)
41 3e9g_A Chromatin modification- 89.0 0.97 3.3E-05 33.8 6.1 48 100-153 6-95 (130)
42 2m0o_A PHD finger protein 1; t 88.3 2 7E-05 29.2 6.7 48 98-153 23-72 (79)
43 2eqj_A Metal-response element- 87.9 3 0.0001 27.5 7.3 48 97-152 9-58 (66)
44 2e5p_A Protein PHF1, PHD finge 86.9 4.2 0.00014 26.9 7.5 53 98-160 6-60 (68)
45 1g5v_A SurviVal motor neuron p 86.4 2.6 8.8E-05 29.3 6.7 43 97-141 6-50 (88)
46 4a4f_A SurviVal of motor neuro 85.2 3.9 0.00013 26.3 6.8 43 97-141 4-48 (64)
47 3p8d_A Medulloblastoma antigen 84.4 3.1 0.00011 27.5 6.0 38 99-139 4-42 (67)
48 2jz2_A SSL0352 protein; SH3-li 83.8 1.8 6.1E-05 28.5 4.4 38 102-140 2-39 (66)
49 3qii_A PHD finger protein 20; 83.2 3.1 0.00011 28.8 5.8 39 98-139 18-57 (85)
50 3h8z_A FragIle X mental retard 83.0 2.9 9.8E-05 31.1 6.0 33 104-139 4-36 (128)
51 1mhn_A SurviVal motor neuron p 81.3 5.8 0.0002 24.9 6.3 40 100-141 2-43 (59)
52 2kfw_A FKBP-type peptidyl-prol 76.6 2.7 9.1E-05 33.3 4.2 34 101-138 89-122 (196)
53 2eko_A Histone acetyltransfera 72.3 4.5 0.00015 28.0 4.0 30 2-31 45-74 (87)
54 3s6w_A Tudor domain-containing 70.0 16 0.00054 22.3 5.9 38 102-141 2-41 (54)
55 4dt4_A FKBP-type 16 kDa peptid 64.6 12 0.00043 28.7 5.5 35 101-138 112-146 (169)
56 3cgm_A SLYD, peptidyl-prolyl C 62.9 14 0.00048 27.9 5.5 35 101-138 84-118 (158)
57 2kr7_A FKBP-type peptidyl-prol 62.0 16 0.00055 27.2 5.7 35 101-138 93-127 (151)
58 2d9t_A Tudor domain-containing 61.6 32 0.0011 22.7 6.8 43 97-141 5-49 (78)
59 4he6_A Peptidase family U32; u 58.7 7.2 0.00025 26.4 2.9 29 97-125 25-53 (89)
60 2l1t_A Uncharacterized protein 58.0 13 0.00043 26.9 4.2 41 99-139 10-51 (109)
61 2k8i_A SLYD, peptidyl-prolyl C 56.8 14 0.00047 28.4 4.5 34 101-138 89-122 (171)
62 2lcc_A AT-rich interactive dom 54.9 7.7 0.00026 26.0 2.4 21 3-23 41-61 (76)
63 2e6z_A Transcription elongatio 52.0 21 0.00071 22.5 4.1 38 98-138 4-41 (59)
64 1qp2_A Protein (PSAE protein); 50.2 20 0.00068 23.8 3.8 38 102-140 2-43 (70)
65 1wgs_A MYST histone acetyltran 49.8 11 0.00039 27.8 2.9 25 2-26 46-70 (133)
66 2ro0_A Histone acetyltransfera 47.4 13 0.00046 25.8 2.8 24 2-25 54-77 (92)
67 2lcs_A NAP1-binding protein 2; 45.3 21 0.00072 22.9 3.4 19 97-115 19-37 (73)
68 2f5k_A MORF-related gene 15 is 43.7 11 0.00036 26.9 1.8 19 2-20 53-71 (102)
69 3m9q_A Protein MALE-specific l 42.8 9.5 0.00033 27.1 1.4 20 2-21 60-79 (101)
70 2ldm_A Uncharacterized protein 48.8 5.2 0.00018 27.4 0.0 38 99-139 4-42 (81)
71 1ix5_A FKBP; ppiase, isomerase 40.8 25 0.00087 26.1 3.7 31 101-139 103-133 (151)
72 2rnz_A Histone acetyltransfera 40.6 22 0.00077 24.8 3.1 24 2-25 56-79 (94)
73 1u3o_A Huntingtin-associated p 40.0 43 0.0015 22.8 4.4 29 96-125 30-59 (82)
74 3pnw_C Tudor domain-containing 39.7 79 0.0027 20.8 6.4 41 99-141 15-57 (77)
75 3oa6_A MALE-specific lethal 3 39.2 13 0.00043 26.9 1.6 19 3-21 61-79 (110)
76 2dig_A Lamin-B receptor; tudor 35.2 94 0.0032 20.3 7.6 57 95-160 6-64 (68)
77 2bud_A Males-absent on the fir 35.0 27 0.00094 24.3 2.8 21 2-22 49-69 (92)
78 4e8b_A Ribosomal RNA small sub 34.8 66 0.0023 25.9 5.5 37 99-138 31-67 (251)
79 3m9p_A MALE-specific lethal 3 34.5 17 0.00058 26.3 1.6 18 3-20 61-78 (110)
80 3kw2_A Probable R-RNA methyltr 31.1 75 0.0026 25.7 5.3 37 99-138 30-66 (257)
81 1vhk_A Hypothetical protein YQ 29.8 94 0.0032 25.2 5.7 39 98-139 33-71 (268)
82 1ixd_A Cylindromatosis tumour- 28.5 1.2E+02 0.0041 21.3 5.3 40 97-137 13-54 (104)
83 1vhy_A Hypothetical protein HI 28.1 98 0.0034 25.0 5.5 39 98-139 32-70 (257)
84 1neg_A Spectrin alpha chain, b 27.6 93 0.0032 20.4 4.4 19 97-115 31-49 (83)
85 2k3y_A Chromatin modification- 27.2 25 0.00084 26.3 1.5 20 2-21 78-97 (136)
86 1z85_A Hypothetical protein TM 25.9 1.1E+02 0.0036 24.5 5.3 37 99-138 38-74 (234)
87 3mea_A SAGA-associated factor 25.5 1.6E+02 0.0055 22.8 6.0 40 99-140 114-156 (180)
88 2dm1_A Protein VAV-2; RHO fami 25.1 1.2E+02 0.0043 18.8 4.6 19 97-115 21-39 (73)
89 3pr9_A FKBP-type peptidyl-prol 25.0 70 0.0024 23.9 3.8 29 102-138 103-131 (157)
90 2o9s_A Ponsin; SH3 domain, sig 23.3 79 0.0027 19.3 3.3 19 97-115 20-38 (67)
91 3e9g_A Chromatin modification- 22.4 51 0.0018 24.4 2.4 19 2-20 76-94 (130)
92 2egv_A UPF0088 protein AQ_165; 20.9 1.3E+02 0.0043 23.8 4.8 37 99-139 26-62 (229)
No 1
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=100.00 E-value=8.7e-58 Score=396.91 Aligned_cols=159 Identities=38% Similarity=0.783 Sum_probs=148.3
Q ss_pred CceEEEEcCCCCCCcEEEeCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHhhCCCCCCCCCcccCCCccc
Q psy15287 1 PRIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHVTKSMAAPPHCFTSSHSSKY 80 (186)
Q Consensus 1 ~r~~lhfdG~~~~~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~~~~~~aP~~~F~~~~~~~~ 80 (186)
.||||||||+++++|||||++|++|||||||++||+.|+||+||. +..|+|++||+++++++||.++|++...
T Consensus 65 ~rl~l~~dg~~~~~dFW~~~~S~~IhPvGwc~~~g~~L~pP~g~~----~~~f~W~~yL~~~~a~~aP~~lF~~~~~--- 137 (324)
T 3ut1_A 65 YRIKLHFDGYSDCYDFWVNADALDIHPVGWCEKTGHKLHPPKGYK----EEEFNWQTYLKTCKAQAAPKSLFENQNI--- 137 (324)
T ss_dssp TEEEEEETTSCGGGCEEEETTCSSEECTTHHHHHTCCEECCTTCC----TTTCCHHHHHHHTTCCBCCGGGCTTTTC---
T ss_pred CEEEEEECCCCCCCCEEEeCCCCCeeccchhHhcCeeccCCCCCc----CCCCCHHHHHHHhCcccCChHHcccCCC---
Confidence 489999999999999999999999999999999999999999999 7899999999999999999999998643
Q ss_pred ccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCeeee
Q psy15287 81 CACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPV 160 (186)
Q Consensus 81 ~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~Pv 160 (186)
....|+|++||||||+|+++ +.+||||||++|.|++|+|||||| ++++||||+++|++||||
T Consensus 138 ---------------~~~~~~F~vGMKLEavDp~~-p~~icvATV~~V~g~~l~v~~Dg~--~~~~d~w~~~~Sp~I~PV 199 (324)
T 3ut1_A 138 ---------------TVIPSGFRVGMKLEAVDKKN-PSFICVATVTDMVDNRFLVHFDNW--DESYDYWCEASSPHIHPV 199 (324)
T ss_dssp ---------------CCCCCSCCTTCEEEEEETTE-EEEEEEEEEEEEETTEEEEEETTS--CGGGCEEECTTCTTEECT
T ss_pred ---------------ccCccccccCCEEEEecCCC-CCcEEEEEEEEEECCEEEEEECCC--CCcCCEEEECCCCCcccC
Confidence 24578999999999999999 999999999999999999999999 888999999999999999
Q ss_pred eceeccCCcccCCCCCCCCCCccc
Q psy15287 161 GWCRRNKVKLVPPASGKRVSPLFF 184 (186)
Q Consensus 161 Gwc~~~g~~L~pP~~~~~~~~~~~ 184 (186)
|||++||++|+||++|+....|.|
T Consensus 200 GWCe~~g~~L~pP~gy~~~~~f~W 223 (324)
T 3ut1_A 200 GWCKEHRRTLITPPGYPNVKHFSW 223 (324)
T ss_dssp THHHHTTCCEECCTTC--CCSCCH
T ss_pred cHHHhcCCCCCCCCCCCCCCcccH
Confidence 999999999999999997666666
No 2
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=100.00 E-value=2.8e-57 Score=380.01 Aligned_cols=150 Identities=38% Similarity=0.609 Sum_probs=142.3
Q ss_pred CceEEEEcCCCCCCcEEEeCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHhh--CCCCCCCCCcccCCCc
Q psy15287 1 PRIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHVT--KSMAAPPHCFTSSHSS 78 (186)
Q Consensus 1 ~r~~lhfdG~~~~~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~~--~~~~aP~~~F~~~~~~ 78 (186)
.||+|||||+++++||||+++|++|||||||++||+.|+||.||. .+.|+|++||++| ++++||.++|+....
T Consensus 91 ~~l~l~~dG~d~~~DfW~~~~S~~I~PvGwc~~~g~~L~pP~g~~----~~~f~W~~yL~~tl~ga~~aP~~lF~~~~~- 165 (243)
T 2biv_A 91 ARLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQPPLGYQ----MNTSSWPMFLLKTLNGSEMASATLFKKEPP- 165 (243)
T ss_dssp TEEEEEETTSCSSSCEEEETTCTTEECTTHHHHTTCCCCCCTTCS----SCGGGHHHHHHHHHTTCCBCCGGGSCCCCC-
T ss_pred CEEEEEECCCCCCCCEeecCCCCccccChhHHhcCCccCCCcccc----cccchHHHHHHHhccCCccCCHHHhccCCC-
Confidence 489999999999999999999999999999999999999999998 6889999999996 999999999998643
Q ss_pred ccccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCee
Q psy15287 79 KYCACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIR 158 (186)
Q Consensus 79 ~~~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~ 158 (186)
....++|++||||||+|+++ |.+||||||++|.|+||+|||||| ++++||||+.+|++||
T Consensus 166 -----------------~~~~~~F~~GmKLEavD~~~-p~~icvATV~~v~g~rl~v~fDgw--~~~~D~W~~~dSp~I~ 225 (243)
T 2biv_A 166 -----------------KPPLNNFKVGMKLEAIDKKN-PYLICPATIGDVKGDEVHITFDGW--SGAFDYWCKYDSRDIF 225 (243)
T ss_dssp -----------------CCSSCCCCTTCEEEEECTTS-TTCEEEEEEEEEETTEEEEEETTS--CGGGCEEEETTCTTEE
T ss_pred -----------------CCccccccCCCEEEEEccCC-CCeEEEEEEEEecCCEEEEEECCC--CCcCCEEEeCCCCCee
Confidence 35678999999999999999 999999999999999999999999 8899999999999999
Q ss_pred eeeceeccCCcccCCCC
Q psy15287 159 PVGWCRRNKVKLVPPAS 175 (186)
Q Consensus 159 PvGwc~~~g~~L~pP~~ 175 (186)
|||||+++|++|+||..
T Consensus 226 PvGWc~~~g~~L~pP~~ 242 (243)
T 2biv_A 226 PAGWCRLTGDVLQPPGT 242 (243)
T ss_dssp CTTHHHHHTCCBCCCCC
T ss_pred cCchHHhhCCCCCCcCC
Confidence 99999999999999963
No 3
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=100.00 E-value=6.3e-57 Score=381.66 Aligned_cols=155 Identities=31% Similarity=0.569 Sum_probs=144.5
Q ss_pred CceEEEEcCCCCCCcEEEeCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHhh--CCCCCCCCCcccCCCc
Q psy15287 1 PRIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHVT--KSMAAPPHCFTSSHSS 78 (186)
Q Consensus 1 ~r~~lhfdG~~~~~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~~--~~~~aP~~~F~~~~~~ 78 (186)
.||+|||||+++.+|||||++|++|||||||++||+.|+||.||. .+.|+|.+||+++ ++.+||.++|.....
T Consensus 63 ~~l~l~~DG~d~~~DfW~~~~S~~I~PvGwc~~~g~~L~pP~g~~----~~~f~W~~yL~ktl~ga~~aP~~lF~~~~~- 137 (265)
T 2r58_A 63 SRLRLRLDGSDSQNDFWRLVDSTEIHAIGHCEKNGGMLQPPLGFC----MNASSWPGYLCKILNNAMVAPEEIFQPEPP- 137 (265)
T ss_dssp TEEEEEETTSCSSCCEEEETTCTTEECTTHHHHTTCCCCCCTTCS----SCGGGHHHHHHHHHTTCCBCCGGGSCCCCC-
T ss_pred CEEEEEeCCCCCcCCEeEeCCCCCeeccccHHhcCCcccCccccc----cCcCCHHHHHHHhhcCCccCCHHHhcccCC-
Confidence 489999999999999999999999999999999999999999998 6889999999996 999999999998753
Q ss_pred ccccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCee
Q psy15287 79 KYCACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIR 158 (186)
Q Consensus 79 ~~~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~ 158 (186)
....++|++||||||+|+++ +.+||||||++|.|+||+|||||| ++.+||||+++|++||
T Consensus 138 -----------------~~~~~~F~vGMKLEavD~~n-p~~icvATV~~v~g~rl~v~fDGw--~~~~D~W~~~~Sp~I~ 197 (265)
T 2r58_A 138 -----------------EPEENLFKVGQKLEAVDKKN-PQLICCATVDAIKDDQIHVTFDGW--RGAFDYWCNYRSRDIF 197 (265)
T ss_dssp -----------------CCSSCCCCTTCEEEEECTTS-TTCEEEEEEEEEETTEEEEEETTS--CGGGCEEEETTCTTEE
T ss_pred -----------------CCcccccccCcEEEeccCCC-CCCEEEEEEEEecCCEEEEEeCCC--CCcCCEEEECCCCCee
Confidence 35688999999999999999 999999999999999999999999 7889999999999999
Q ss_pred eeeceeccCCcccCCCCCCCCC
Q psy15287 159 PVGWCRRNKVKLVPPASGKRVS 180 (186)
Q Consensus 159 PvGwc~~~g~~L~pP~~~~~~~ 180 (186)
|||||+++||+|+||.++....
T Consensus 198 PvGWc~~~g~~L~pP~~~~~~~ 219 (265)
T 2r58_A 198 PAGWCARSCHPMQPPGHKSRMD 219 (265)
T ss_dssp CTTHHHHHTCCCBCCCCCC---
T ss_pred cCchHHhcCCcCCCCCCcCcCC
Confidence 9999999999999998886543
No 4
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=100.00 E-value=3.7e-57 Score=394.14 Aligned_cols=160 Identities=42% Similarity=0.828 Sum_probs=150.8
Q ss_pred CceEEEEcCCCCCCcEEEeCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHhhCCCCCCCCCcccCCCccc
Q psy15287 1 PRIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHVTKSMAAPPHCFTSSHSSKY 80 (186)
Q Consensus 1 ~r~~lhfdG~~~~~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~~~~~~aP~~~F~~~~~~~~ 80 (186)
.||||||||+++++|||||++|++|||||||++||+.|+||+||. ...|+|++||++|++++||.++|++...
T Consensus 70 ~rl~l~~dg~~~~~dFW~~~~S~~IhPvGwc~~~g~~L~pP~~~~----~~~f~W~~yL~~t~a~~aP~~lF~~~~~--- 142 (331)
T 1oz2_A 70 YRLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQPPKGYK----EEEFSWSQYLRSTRAQAAPKHLFVSQSH--- 142 (331)
T ss_dssp TEEEEEETTSCGGGCEEEETTCTTEECTTHHHHHTCCEECCTTCC----GGGCCHHHHHHHHTCCBCCGGGCSCSSC---
T ss_pred CEEEEEECCCCCCCCEEEcCCCCCcccCchHHhcCCcccCccccc----cccCcHHHHHHhcCCCCCChHHhcccCC---
Confidence 489999999999999999999999999999999999999999999 6899999999999999999999998543
Q ss_pred ccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCeeee
Q psy15287 81 CACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPV 160 (186)
Q Consensus 81 ~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~Pv 160 (186)
....++|++||||||+|+++ +.+||||||++|.|.||+|||||| ++++||||+.+|++||||
T Consensus 143 ---------------~~~~~~F~vGmKLEavD~~n-p~~icvATV~~v~g~r~~v~~Dg~--~~~~D~w~~~~S~~I~PV 204 (331)
T 1oz2_A 143 ---------------SPPPLGFQVGMKLEAVDRMN-PSLVCVASVTDVVDSRFLVHFDNW--DDTYDYWCDPSSPYIHPV 204 (331)
T ss_dssp ---------------SCCCTTCCTTCEEEEECTTS-TTCEEEEEEEEEETTEEEEEETTS--CGGGCEEECTTCTTEECT
T ss_pred ---------------CCCccccccccEEEeccCCC-CCcEEEEEEEEeeCCEEEEEeCCC--CCccCEEEecCCCCccCC
Confidence 35689999999999999999 999999999999999999999999 889999999999999999
Q ss_pred eceeccCCcccCCCCCCCCCCcccc
Q psy15287 161 GWCRRNKVKLVPPASGKRVSPLFFI 185 (186)
Q Consensus 161 Gwc~~~g~~L~pP~~~~~~~~~~~~ 185 (186)
|||+++|++|+||.+|.....+.|.
T Consensus 205 Gwc~~~g~~L~pP~gy~~~~~f~W~ 229 (331)
T 1oz2_A 205 GWCQKQGKPLTPPQDYPDPDNFCWE 229 (331)
T ss_dssp THHHHHTCCEECSTTCSSGGGCCHH
T ss_pred chHHhcCCCCCCCCCCCcCCcccHH
Confidence 9999999999999999877767663
No 5
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=100.00 E-value=4.3e-57 Score=392.54 Aligned_cols=151 Identities=37% Similarity=0.772 Sum_probs=139.6
Q ss_pred CceEEEEcCCCCCCcEEEeCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHhhCCCCCCCCCcccCCCccc
Q psy15287 1 PRIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHVTKSMAAPPHCFTSSHSSKY 80 (186)
Q Consensus 1 ~r~~lhfdG~~~~~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~~~~~~aP~~~F~~~~~~~~ 80 (186)
.||+|||||+++.+|||||++|++|||||||++||+.|+||.||.. ...|+|++||++|++++||.++|+..
T Consensus 172 ~~l~v~~Dg~~~~~d~w~~~~Sp~I~PVGWCe~~g~~L~pP~gy~~---~~~f~W~~YL~~t~a~aaP~~~F~~~----- 243 (324)
T 3ut1_A 172 NRFLVHFDNWDESYDYWCEASSPHIHPVGWCKEHRRTLITPPGYPN---VKHFSWDKYLEETNSLPAPARAFKVK----- 243 (324)
T ss_dssp TEEEEEETTSCGGGCEEECTTCTTEECTTHHHHTTCCEECCTTC-----CCSCCHHHHHHHTTCCBCCGGGCCCC-----
T ss_pred CEEEEEECCCCCcCCEEEECCCCCcccCcHHHhcCCCCCCCCCCCC---CCcccHHHHHHhhCCCCCCHHHhccc-----
Confidence 4899999999999999999999999999999999999999999982 36899999999999999999999864
Q ss_pred ccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCeeee
Q psy15287 81 CACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPV 160 (186)
Q Consensus 81 ~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~Pv 160 (186)
..++|++||||||+|+++ |.+||||||++|.|++|+|||||| ++.+|||+|++|++||||
T Consensus 244 -----------------~~~~F~~gmkLEAvD~~~-p~licvATV~~v~g~~l~v~fDgw--~~~~d~w~~~~S~dI~Pv 303 (324)
T 3ut1_A 244 -----------------PPHGFQKKMKLEVVDKRN-PMFIRVATVADTDDHRVKVHFDGW--NNCYDYWIDADSPDIHPV 303 (324)
T ss_dssp -----------------CCCCCCTTCEEEEECSSS-TTCEEEEEEEEECSSEEEEEETTS--CGGGCEEEETTCTTEECT
T ss_pred -----------------ccccCCCCCeeeccCCCC-CCceeEEEEEEecCCEEEEEeCCC--CCCCCEEEeCCCCCeece
Confidence 368999999999999999 999999999999999999999999 788999999999999999
Q ss_pred eceeccCCcccCCCCCCCC
Q psy15287 161 GWCRRNKVKLVPPASGKRV 179 (186)
Q Consensus 161 Gwc~~~g~~L~pP~~~~~~ 179 (186)
|||+++||+||||.++++.
T Consensus 304 GWC~~~g~~LqpP~~~~~~ 322 (324)
T 3ut1_A 304 GWCSKTGHPLQPPLSPLEL 322 (324)
T ss_dssp THHHHHTCCCBCSCC----
T ss_pred ehHhhcCCCCcCcCCCccc
Confidence 9999999999999998764
No 6
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=100.00 E-value=3.7e-56 Score=387.84 Aligned_cols=152 Identities=36% Similarity=0.748 Sum_probs=144.2
Q ss_pred CceEEEEcCCCCCCcEEEeCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHhhCCCCCCCCCcccCCCccc
Q psy15287 1 PRIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHVTKSMAAPPHCFTSSHSSKY 80 (186)
Q Consensus 1 ~r~~lhfdG~~~~~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~~~~~~aP~~~F~~~~~~~~ 80 (186)
.||+||||||++++|||||++|++|||||||++||+.|+||.||.. .+.|+|++||++|++.+||.++|+..
T Consensus 177 ~r~~v~~Dg~~~~~D~w~~~~S~~I~PVGwc~~~g~~L~pP~gy~~---~~~f~W~~yL~~~ga~~aP~~~F~~~----- 248 (331)
T 1oz2_A 177 SRFLVHFDNWDDTYDYWCDPSSPYIHPVGWCQKQGKPLTPPQDYPD---PDNFCWEKYLEETGASAVPTWAFKVR----- 248 (331)
T ss_dssp TEEEEEETTSCGGGCEEECTTCTTEECTTHHHHHTCCEECSTTCSS---GGGCCHHHHHHHHTCCBCCGGGCCCC-----
T ss_pred CEEEEEeCCCCCccCEEEecCCCCccCCchHHhcCCCCCCCCCCCc---CCcccHHHHHHhcCCCcCCHHHcccc-----
Confidence 4899999999999999999999999999999999999999999972 47799999999999999999999864
Q ss_pred ccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCeeee
Q psy15287 81 CACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPV 160 (186)
Q Consensus 81 ~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~Pv 160 (186)
..++|++||||||+|+++ |.+||||||++|.|++|+|+|||| ++.+|||||++|++||||
T Consensus 249 -----------------~~~~F~~gmKLEavD~~~-p~~ic~AtV~~v~~~~l~v~fDgw--~~~~d~w~~~dS~~I~Pv 308 (331)
T 1oz2_A 249 -----------------PPHSFLVNMKLEAVDRRN-PALIRVASVEDVEDHRIKIHFDGW--SHGYDFWIDADHPDIHPA 308 (331)
T ss_dssp -----------------CCCCCCTTCEEEEECSSS-TTCEEEEEEEEECSSEEEEEETTB--CGGGCEEEETTCTTEECT
T ss_pred -----------------cccccccCceeEeecccC-CCcEEeeEEEEEcCCEEEEEeCCC--CCcCCEEEECCCCCcccc
Confidence 368999999999999999 999999999999999999999999 788999999999999999
Q ss_pred eceeccCCcccCCCCCCCCC
Q psy15287 161 GWCRRNKVKLVPPASGKRVS 180 (186)
Q Consensus 161 Gwc~~~g~~L~pP~~~~~~~ 180 (186)
|||+++||+|+||.+++++.
T Consensus 309 GWc~~~g~~L~pP~~~~~~~ 328 (331)
T 1oz2_A 309 GWCSKTGHPLQPPLGPREPS 328 (331)
T ss_dssp THHHHHTCCCBCCCCTTCTT
T ss_pred chHHhcCCCCCCcCCCCcCC
Confidence 99999999999999998765
No 7
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=100.00 E-value=6.6e-53 Score=378.68 Aligned_cols=146 Identities=34% Similarity=0.605 Sum_probs=137.7
Q ss_pred ceEEEEcCCCCC--CcEEE-eCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHhhCCCCCCCCCcccCCCc
Q psy15287 2 RIRLHFDGYPDR--FDFWV-NCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHVTKSMAAPPHCFTSSHSS 78 (186)
Q Consensus 2 r~~lhfdG~~~~--~dfW~-~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~~~~~~aP~~~F~~~~~~ 78 (186)
|++|||||+++. +|||| |++||+|||||||++||+.|+||.||. ...|+|++||++|++++||.++|++.
T Consensus 285 ~l~l~~Dg~~~~~~~d~~~~h~~Sp~I~PVGwc~~ng~~L~pP~g~~----~~~f~W~~yL~~t~~~~aP~~lF~~~--- 357 (437)
T 3feo_A 285 FLMIGIDGSEAADGSDWFCYHATSPSIFPVGFCEINMIELTPPRGYT----KLPFKWFDYLRETGSIAAPVKLFNKD--- 357 (437)
T ss_dssp EEEEEETTCCC-CCTTCEEEETTCTTEECTTHHHHHTCCEECCTTCC----SSSCCHHHHHHHHTCCBCCGGGGCCC---
T ss_pred EEEEEeCCCCCCCCCCeEEeeCCCCCcccchhHhhcCccccCCCCcc----cCcchHHHHHHhhCCccCCHHHcCCC---
Confidence 789999999865 49999 999999999999999999999999999 56899999999999999999999975
Q ss_pred ccccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCee
Q psy15287 79 KYCACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIR 158 (186)
Q Consensus 79 ~~~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~ 158 (186)
.+.|+|++||||||+|++| |.+||||||++|.|++|+|||||| ++.+|+|+|++|++||
T Consensus 358 ------------------~~~~~F~~GMKLEAvD~~n-p~~IcvATV~~v~~~~l~v~fDgw--~~~~d~w~~~~S~~I~ 416 (437)
T 3feo_A 358 ------------------VPNHGFRVGMKLEAVDLME-PRLICVATVTRIIHRLLRIHFDGW--EEEYDQWVDCESPDLY 416 (437)
T ss_dssp ------------------CCCCCCCTTCEEEEECTTS-TTCEEEEEEEEEETTEEEEEETTS--CGGGCEEEETTCTTEE
T ss_pred ------------------CccccCccCCEEEeecCCC-CCcEEEEEEeEEcCCEEEEEECCC--CCcCCeEEeCCCCCcc
Confidence 3578999999999999999 999999999999999999999999 8889999999999999
Q ss_pred eeeceeccCCcccCCCC
Q psy15287 159 PVGWCRRNKVKLVPPAS 175 (186)
Q Consensus 159 PvGwc~~~g~~L~pP~~ 175 (186)
|||||++||++|+||.+
T Consensus 417 PvGwC~~~g~~L~pP~g 433 (437)
T 3feo_A 417 PVGWCQLTGYQLQPPAS 433 (437)
T ss_dssp CTTHHHHHTCCEECCC-
T ss_pred cCcHHHhcCCCCcCCCC
Confidence 99999999999999987
No 8
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=100.00 E-value=1.5e-52 Score=377.71 Aligned_cols=154 Identities=34% Similarity=0.570 Sum_probs=137.3
Q ss_pred CceEEEEcCCCCC---CcEEEeCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHhhCCCCCCCCCcccCCC
Q psy15287 1 PRIRLHFDGYPDR---FDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHVTKSMAAPPHCFTSSHS 77 (186)
Q Consensus 1 ~r~~lhfdG~~~~---~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~~~~~~aP~~~F~~~~~ 77 (186)
.+++|||||+++. .+||||++|++|||||||++||+.|+||+||. ...|+|.+||++|++++||.++|++..
T Consensus 288 ~~l~l~~Dg~~~~~~~d~f~~h~~Sp~I~PVGwce~ng~~L~pP~gy~----~~~f~W~~yL~~~~~~~aP~~lF~~~~- 362 (456)
T 3f70_A 288 GYLMICVDGGPSTDGLDWFCYHASSHAIFPATFCQKNDIELTPPKGYE----AQTFNWENYLEKTKSKAAPSRLFNMDC- 362 (456)
T ss_dssp TEEEEEEC--------CCEEEETTCTTEECTTHHHHTTCCEECCTTCC----SSSCCHHHHHHHHTCCBCCGGGSCCCC-
T ss_pred CEEEEEecCCCccCCCCcEEEeCCCCCccccchHHHcCccccCCcccc----cccccHHHHHHhhCCccCCHHHhCcCC-
Confidence 3789999999653 34999999999999999999999999999999 688999999999999999999998753
Q ss_pred cccccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCe
Q psy15287 78 SKYCACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYI 157 (186)
Q Consensus 78 ~~~~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I 157 (186)
..++|++||||||+|++| |.+||||||++|.|++|+|||||| ++.+|+|++++|++|
T Consensus 363 --------------------~~~~F~~GMKLEAvD~~n-p~~icvATV~~v~~~~l~i~fDgw--~~~~d~w~~~~S~~I 419 (456)
T 3f70_A 363 --------------------PNHGFKVGMKLEAVDLME-PRLICVATVKRVVHRLLSIHFDGW--DSEYDQWVDCESPDI 419 (456)
T ss_dssp --------------------CCCCCCTTCEEEEECTTS-TTCEEEEEEEEEETTEEEEEETTS--CGGGCEEEETTCTTE
T ss_pred --------------------CccccccCCEEEeecCCC-CCcEEEEEEEEecCCEEEEEeCCC--CCCCCeEeecCCCCc
Confidence 468999999999999999 999999999999999999999999 888999999999999
Q ss_pred eeeeceeccCCcccCCCCCCCCCCc
Q psy15287 158 RPVGWCRRNKVKLVPPASGKRVSPL 182 (186)
Q Consensus 158 ~PvGwc~~~g~~L~pP~~~~~~~~~ 182 (186)
||||||+++|++|+||.+....+|.
T Consensus 420 ~PvGwCe~~g~~L~pP~~~~~~~~~ 444 (456)
T 3f70_A 420 YPVGWCELTGYQLQPPVAAEPATPL 444 (456)
T ss_dssp ECTTHHHHHTCCEECSSSSCC----
T ss_pred ccccHHHhcCCCCCCcCCCCCCCcc
Confidence 9999999999999999997666654
No 9
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=100.00 E-value=2.3e-52 Score=375.78 Aligned_cols=146 Identities=33% Similarity=0.534 Sum_probs=137.6
Q ss_pred ceEEEEcCCCCC----CcEEEeCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHhhCCCCCCCCCcccCCC
Q psy15287 2 RIRLHFDGYPDR----FDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHVTKSMAAPPHCFTSSHS 77 (186)
Q Consensus 2 r~~lhfdG~~~~----~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~~~~~~aP~~~F~~~~~ 77 (186)
+++|||||+++. ..||||++|++|||||||++||+.|+||.||. ...|+|++||++|++++||.++|++..
T Consensus 298 ~~~v~~Dg~~~~~~~~d~f~~~~~S~~I~PvGwce~ng~~L~pP~gy~----~~~f~W~~yl~~~~a~~aP~~lF~~~~- 372 (447)
T 3h6z_A 298 YMMIRIDSYQPDASGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYD----SRTFTWEGYLSDTGAVAAGQHLFHDII- 372 (447)
T ss_dssp EEEEEETTSCTTCTTTTCEEEETTCTTEECTTHHHHTTCCCCCCTTCC----TTTCCHHHHHHHHTCCBCCGGGSCCCC-
T ss_pred EEEEEECCCCcccCCCccEEEeCCCCCcCccchHHhcCccCCCCCCcc----ccCCcHHHHHHhhCCCcCcHHHcCCCC-
Confidence 689999999653 34899999999999999999999999999998 789999999999999999999998863
Q ss_pred cccccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCe
Q psy15287 78 SKYCACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYI 157 (186)
Q Consensus 78 ~~~~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I 157 (186)
..++|++||||||+|++| |.+||||||++|.|++|+|||||| ++.+|||+|++|++|
T Consensus 373 --------------------~~~~F~~gmkLEAvD~~n-p~~icvATV~~v~~~~~~i~fDgw--~~~~d~w~~~~S~dI 429 (447)
T 3h6z_A 373 --------------------PDHGFEVGMSLECADLMD-PRLVCVATVARVVGRLLKVHFDGW--TDEYDQWLDCESADI 429 (447)
T ss_dssp --------------------CCCCCCTTCEEEEECTTS-TTCEEEEEEEEEETTEEEEECTTS--CGGGCEEEETTCTTE
T ss_pred --------------------CCCccccCCEEEeecCCC-CCcEEEEEEeEecCCEEEEEeCCC--CCcCCEEEecCCCCc
Confidence 478999999999999999 999999999999999999999999 889999999999999
Q ss_pred eeeeceeccCCcccCCCC
Q psy15287 158 RPVGWCRRNKVKLVPPAS 175 (186)
Q Consensus 158 ~PvGwc~~~g~~L~pP~~ 175 (186)
||||||+++||+|+||+.
T Consensus 430 ~PvGWC~~~g~~L~~P~~ 447 (447)
T 3h6z_A 430 YPVGWCVLVNHKLEGPPR 447 (447)
T ss_dssp ECTTHHHHHTCCEECCCC
T ss_pred cccchhhhcCCCCCCCCC
Confidence 999999999999999973
No 10
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.9e-46 Score=336.75 Aligned_cols=153 Identities=25% Similarity=0.497 Sum_probs=136.0
Q ss_pred CceEEEEcCCCC--CCcEEEeCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHh--hCCCCCCCCCcccCC
Q psy15287 1 PRIRLHFDGYPD--RFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHV--TKSMAAPPHCFTSSH 76 (186)
Q Consensus 1 ~r~~lhfdG~~~--~~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~--~~~~~aP~~~F~~~~ 76 (186)
.||||||+|+++ ++|||||+.|++|||||||+++|+.|+||.++. ...++|++||++ +++.+||..+|+++.
T Consensus 74 ~rllLry~G~~~d~~~DFW~~~~s~~ihpvGwc~~~~~~l~PP~~i~----~~~~~W~~yL~~~ltga~t~P~~~f~~~~ 149 (437)
T 3feo_A 74 YNALLRYEGFENDSGLDFWCNICGSDIHPVGWCAASGKPLVPPRTIQ----HKYTNWKAFLVKRLTGAKTLPPDFSQKVS 149 (437)
T ss_dssp TEEEEEETTCTTCCTTCEEEETTSTTCEETTHHHHHTCCBCCCGGGT----TTCSCHHHHHHHHHTTCCCCCTTHHHHHH
T ss_pred eEEEEEecccCCCCCCCcceeCCCccccccccHhhcCCEecCCcccc----cccccHHHHHHHHhhcCccCChhHhhccc
Confidence 389999999964 589999999999999999999999999999998 577899999999 799999999999875
Q ss_pred CcccccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCC
Q psy15287 77 SSKYCACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAY 156 (186)
Q Consensus 77 ~~~~~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~ 156 (186)
. ...+.|++|||||++|+.+ +..+|||||++|+|+||+|+|+|.+ +.+.||||+++|++
T Consensus 150 ~-------------------~~~~~F~~GmkLEv~d~~~-~~~~~vAtV~~v~G~rl~Lry~g~~-d~~~dFW~~~~S~~ 208 (437)
T 3feo_A 150 E-------------------SMQYPFKPCMRVEVVDKRH-LCRTRVAVVESVIGGRLRLVYEESE-DRTDDFWCHMHSPL 208 (437)
T ss_dssp H-------------------HTCCSCCTTEEEEEEETTE-EEEEEEEEEEEEETTEEEEEESSCS-STTCEEEEETTCTT
T ss_pred c-------------------ccCCCCCCCCEEEEecCCC-CcceEEEEEEEEECCEEEEEEeCCC-CCCCCeEEeCCCCC
Confidence 3 4568899999999999999 9999999999999999999999984 55689999999999
Q ss_pred eeeeeceeccCCcccCCCCCCC
Q psy15287 157 IRPVGWCRRNKVKLVPPASGKR 178 (186)
Q Consensus 157 I~PvGwc~~~g~~L~pP~~~~~ 178 (186)
|||||||+++|+.|+||..++.
T Consensus 209 IhPvGWc~~~g~~L~pP~~~~~ 230 (437)
T 3feo_A 209 IHHIGWSRSIGHRFKRSDITKK 230 (437)
T ss_dssp EECTTHHHHHTCCBC-------
T ss_pred ccccchHHhcCCcccCchhhhh
Confidence 9999999999999999987764
No 11
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=100.00 E-value=8.3e-46 Score=333.87 Aligned_cols=148 Identities=28% Similarity=0.526 Sum_probs=128.7
Q ss_pred CceEEEEcCCC--CCCcEEEeCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHh--hCCCCCCCCCcccCC
Q psy15287 1 PRIRLHFDGYP--DRFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHV--TKSMAAPPHCFTSSH 76 (186)
Q Consensus 1 ~r~~lhfdG~~--~~~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~--~~~~~aP~~~F~~~~ 76 (186)
.||||||||++ +++||||+++|++|||||||+++|+.|+||.++. ...++|.+||++ +++.++|.++|+...
T Consensus 72 ~rL~Lry~G~~~d~~~DFW~~~~s~~ihPvGWc~~~g~~L~PP~~i~----~~~~~W~~~L~k~l~ga~~~P~~f~~~~~ 147 (456)
T 3f70_A 72 YRVLLRYEGFENDASHDFWCNLGTVDVHPIGWCAINSKILVPPRTIH----AKFTDWKGYLMKRLVGSRTLPVDFHIKMV 147 (456)
T ss_dssp TEEEEEETTCTTCCTTCEEEETTSTTEECTTHHHHTTCCBCCCTTTG----GGCSCHHHHHHHHHTTCCBCCTTHHHHHH
T ss_pred eeEEEEecccCCCCcCCcceeCCCCceeecccHHhcCcEecCCcccc----cCcccHHHHHHHHhccCccCCHHHhhccc
Confidence 38999999996 4699999999999999999999999999999998 678999999987 689999999887654
Q ss_pred CcccccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCC
Q psy15287 77 SSKYCACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAY 156 (186)
Q Consensus 77 ~~~~~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~ 156 (186)
. ...+.|++||||||+|+.+ +..||||||++|.|+|++|+|+|+ ++.+||||+++|++
T Consensus 148 ~-------------------~~~~~F~~GmkLE~vD~~~-~~~~~vAtV~~v~g~rl~l~~~~~--~~~~dfWc~~~Sp~ 205 (456)
T 3f70_A 148 E-------------------SMKYPFRQGMRLEVVDKSQ-VSRTRMAVVDTVIGGRLRLLYEDG--DSDDDFWCHMWSPL 205 (456)
T ss_dssp H-------------------HTSCSSCTTCEEEEECTTC-TTCEEEEEEEEEETTEEEEEECC------CCEEEETTCTT
T ss_pred c-------------------ccCCCCCCCCEEEEECCCC-CcceEEEEEEEEECCEEEEEEcCC--CCCCceEEeCCCCC
Confidence 2 3578899999999999999 999999999999999999999999 78899999999999
Q ss_pred eeeeeceeccCCcccCCC
Q psy15287 157 IRPVGWCRRNKVKLVPPA 174 (186)
Q Consensus 157 I~PvGwc~~~g~~L~pP~ 174 (186)
|||||||++||++|+||.
T Consensus 206 IhPVGW~~~~G~~L~pP~ 223 (456)
T 3f70_A 206 IHPVGWSRRVGHGIKMSE 223 (456)
T ss_dssp EEETTHHHHHTC------
T ss_pred eeccccHhhcCCccCCCc
Confidence 999999999999999997
No 12
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=100.00 E-value=6.4e-46 Score=333.90 Aligned_cols=149 Identities=24% Similarity=0.525 Sum_probs=137.2
Q ss_pred CceEEEEcCCCC-CCcEEEeCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHh--hCCCCCCCCCcccCCC
Q psy15287 1 PRIRLHFDGYPD-RFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHV--TKSMAAPPHCFTSSHS 77 (186)
Q Consensus 1 ~r~~lhfdG~~~-~~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~--~~~~~aP~~~F~~~~~ 77 (186)
.||||||+|+++ ++|||||++|++|||||||+++|+.|+||.++. ...++|.+||++ +++.++|.++|+....
T Consensus 76 ~rLlLry~G~~~d~~DFW~~~~S~~ihPvGWc~~~g~~L~PP~~i~----~~~~dW~~~L~~~l~ga~~~P~~lf~~~~~ 151 (447)
T 3h6z_A 76 YKALMSYEGFDTDSHDFWVNLCNAEVHSVGWCATRGKPLIPPRTIE----HKYKDWKDFLVGRLSGARTLPSNFYNKIND 151 (447)
T ss_dssp TEEEEEETTCSSGGGCEEEETTTSSCBCTTHHHHHTCCBCCCGGGG----GGCSCCHHHHHHHHTTCCCSCTTHHHHHHH
T ss_pred cEEEEEEccCCCCCCCccccCCCCceecCchHhhcCceecCCcccc----ccccCHHHHHHHHhcCCcCCCHHHhhhccc
Confidence 389999999974 699999999999999999999999999999998 678999999987 5889999999988653
Q ss_pred cccccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCe
Q psy15287 78 SKYCACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYI 157 (186)
Q Consensus 78 ~~~~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I 157 (186)
...+.|++||||||+|+.+ +..||||||++|+|+|++|+|++ ..+||||+.+|++|
T Consensus 152 -------------------~~~~~F~~GmkLE~vD~~~-~~~i~vAtV~~v~g~rl~l~~~d----~~~dfwc~~~Sp~I 207 (447)
T 3h6z_A 152 -------------------SLQSRFRLGLNLECVDKDR-ISQVRLATVTKIVGDRLFLRYFD----SDDGFWCHEDSPII 207 (447)
T ss_dssp -------------------HTSCSSCTTCEEEEECTTC-TTEEEEEEEEEEETTEEEEEETT----CSCEEEEETTCTTE
T ss_pred -------------------ccccccCCCCEEEEEcCCC-CccEEEEEEEEEECCcEEEEEEC----CCCCEEEeCCCCCc
Confidence 3578899999999999999 99999999999999999999963 35799999999999
Q ss_pred eeeeceeccCCcccCCCCCC
Q psy15287 158 RPVGWCRRNKVKLVPPASGK 177 (186)
Q Consensus 158 ~PvGwc~~~g~~L~pP~~~~ 177 (186)
||||||+++|++|+||.+|.
T Consensus 208 ~PVGW~~~~g~~L~pP~~y~ 227 (447)
T 3h6z_A 208 HPVGWATTVGHNLAAPQDYL 227 (447)
T ss_dssp ECTTHHHHHTCEEECCHHHH
T ss_pred cccchHHhcCccccCChhhh
Confidence 99999999999999999885
No 13
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=100.00 E-value=2.5e-43 Score=295.42 Aligned_cols=136 Identities=30% Similarity=0.502 Sum_probs=102.7
Q ss_pred CCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHhhCCCCCCCCCcccCCCcccccccCCCCCcccccCCCCCCC
Q psy15287 22 HPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHVTKSMAAPPHCFTSSHSSKYCACATQPGSHCFTSSHMPPSV 101 (186)
Q Consensus 22 S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~~~~~~aP~~~F~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 101 (186)
+.+..|||||+.+++.|.||+|+. ...|+|++||++|++.+||.++|++... ...++
T Consensus 6 ~~~~~~v~w~~~~~~~~~pp~~~~----~~~f~W~~yL~~t~~~aaP~~lF~~~~~-------------------~~~~~ 62 (243)
T 2biv_A 6 NEDSMDVKKENQEKTPQSSTSSVQ----RDDFHWEEYLKETGSISAPSECFRQSQI-------------------PPVND 62 (243)
T ss_dssp ------------------------------CCCHHHHHHHHTCCBCCGGGSSSCSS-------------------CCCCC
T ss_pred cCCccccceeecCCccCCCCCccc----cCCCCHHHHHHHcCCccCCHHHHcCCCC-------------------CCccc
Confidence 567789999999999999999999 8999999999999999999999998753 56799
Q ss_pred CCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCeeeeeceeccCCcccCCCCCCCCCC
Q psy15287 102 FKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPVGWCRRNKVKLVPPASGKRVSP 181 (186)
Q Consensus 102 F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~PvGwc~~~g~~L~pP~~~~~~~~ 181 (186)
|++||||||+|+++ +.+||||||++|.|+||+|+|||| ++++|||++++|++|||||||+++|++|+||.+|.. ..
T Consensus 63 f~vGmKLEa~D~~~-~~~~~vATV~~v~g~~l~l~~dG~--d~~~DfW~~~~S~~I~PvGwc~~~g~~L~pP~g~~~-~~ 138 (243)
T 2biv_A 63 FKVGMKLEARDPRN-ATSVCIATVIGITGARLRLRLDGS--DNRNDFWRLVDSPDIQPVGTCEKEGDLLQPPLGYQM-NT 138 (243)
T ss_dssp CCTTCEEEEEETTE-EEEEEEEEEEEEETTEEEEEETTS--CSSSCEEEETTCTTEECTTHHHHTTCCCCCCTTCSS-CG
T ss_pred ccCCCEEEEecCCC-CCcEEEEEEEEEeCCEEEEEECCC--CCCCCEeecCCCCccccChhHHhcCCccCCCccccc-cc
Confidence 99999999999999 999999999999999999999999 788999999999999999999999999999999974 44
Q ss_pred ccc
Q psy15287 182 LFF 184 (186)
Q Consensus 182 ~~~ 184 (186)
+.|
T Consensus 139 f~W 141 (243)
T 2biv_A 139 SSW 141 (243)
T ss_dssp GGH
T ss_pred chH
Confidence 444
No 14
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=100.00 E-value=1.6e-36 Score=256.73 Aligned_cols=112 Identities=35% Similarity=0.613 Sum_probs=102.4
Q ss_pred CCCCCHHHHHHhhCCCCCCCCCcccCCCcccccccCCCCCcccccCCCCCCCCCcccEEEeecCCCCCccEEEEEEEeee
Q psy15287 50 TAWFSWGKYLHVTKSMAAPPHCFTSSHSSKYCACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVI 129 (186)
Q Consensus 50 ~~~f~W~~YL~~~~~~~aP~~~F~~~~~~~~~~~~~~~g~~~~~~~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~ 129 (186)
...|+|++||+++++.+||.++|++... ...|.|++||||||+|+++ +.+||||||++|+
T Consensus 2 ~~~f~W~~yL~~~~a~~aP~~~Fk~~~~-------------------~~~~~F~vGMKLEavDp~~-~~~icvATV~~v~ 61 (265)
T 2r58_A 2 AMAFDWDAYLEETGSEAAPAKCFKQAQN-------------------PPNNDFKIGMKLEALDPRN-VTSTCIATVVGVL 61 (265)
T ss_dssp --CCCHHHHHHHTTCCBCCGGGSSSCSS-------------------CCCCCCCTTCEEEEEETTE-EEEEEEEEEEEEE
T ss_pred CccccHHHHHHhcCCccCCHHHhcCCCC-------------------CCccccccCCEeEEecCCC-CCCEEEEEEEEEe
Confidence 3579999999999999999999999863 5689999999999999999 9999999999999
Q ss_pred CCeEEEEecCCCCCCCCCeEEeCCCCCeeeeeceeccCCcccCCCCCCCCCCccc
Q psy15287 130 GTRLHIHIDSAGSSDRMDYWTDIGSAYIRPVGWCRRNKVKLVPPASGKRVSPLFF 184 (186)
Q Consensus 130 g~~l~v~~dg~~~d~~~d~W~d~~S~~I~PvGwc~~~g~~L~pP~~~~~~~~~~~ 184 (186)
|.+|+|+|||| ++++||||+++|++|||||||+++|++|+||.+|.. ..+.|
T Consensus 62 g~~l~l~~DG~--d~~~DfW~~~~S~~I~PvGwc~~~g~~L~pP~g~~~-~~f~W 113 (265)
T 2r58_A 62 GSRLRLRLDGS--DSQNDFWRLVDSTEIHAIGHCEKNGGMLQPPLGFCM-NASSW 113 (265)
T ss_dssp TTEEEEEETTS--CSSCCEEEETTCTTEECTTHHHHTTCCCCCCTTCSS-CGGGH
T ss_pred CCEEEEEeCCC--CCcCCEeEeCCCCCeeccccHHhcCCcccCcccccc-CcCCH
Confidence 99999999999 888999999999999999999999999999999974 33444
No 15
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=100.00 E-value=4.1e-35 Score=217.24 Aligned_cols=80 Identities=39% Similarity=0.692 Sum_probs=77.1
Q ss_pred CCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCeeeeeceeccCCcccCCCCCC
Q psy15287 98 PPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPVGWCRRNKVKLVPPASGK 177 (186)
Q Consensus 98 ~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~PvGwc~~~g~~L~pP~~~~ 177 (186)
+.++|++||||||+|+++ +.+||||||++|.|.||+|||||| ++++||||+++|++|||||||+++|++|+||.+|.
T Consensus 10 p~~~F~~GMKLEAvD~~~-p~~icvATV~~v~g~rl~v~fDGw--~~~~D~W~~~dSpdIhPVGWc~~~g~~LqpP~~~~ 86 (107)
T 1wjq_A 10 PPHGFQKKMKLEVVDKRN-PMFIRVATVADTDDHRVKVHFDGW--NNCYDYWIDADSPDIHPVGWCSKTGHPLQPPLSPL 86 (107)
T ss_dssp CSSSCCSSCEEEEECTTC-TTCEEEEEEEEECSSCEEEECSSS--CGGGCEEECTTCSSCEETTHHHHHTCCCBCCSCTT
T ss_pred CcccCCCCCEEEEEcCCC-CCcEEeEEEEEecCCEEEEEeCCC--CCcCCEEEECCCCCcccCcHHHhcCCCCCCCCCcC
Confidence 478999999999999999 999999999999999999999999 88899999999999999999999999999999998
Q ss_pred CCC
Q psy15287 178 RVS 180 (186)
Q Consensus 178 ~~~ 180 (186)
++.
T Consensus 87 ~~~ 89 (107)
T 1wjq_A 87 ELM 89 (107)
T ss_dssp TTC
T ss_pred ccc
Confidence 774
No 16
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=99.97 E-value=5.8e-33 Score=211.89 Aligned_cols=87 Identities=23% Similarity=0.462 Sum_probs=79.9
Q ss_pred CCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCeeeeeceeccCCcccCCCCC
Q psy15287 97 MPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPVGWCRRNKVKLVPPASG 176 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~PvGwc~~~g~~L~pP~~~ 176 (186)
.+.+.|++||||||+|+++ +.+||||||++|+|+||+||||||++++++||||+++|++|||||||+++|++|+||.+|
T Consensus 7 ~p~~~f~~GmKLEa~D~~~-p~~~~vAtV~~v~g~rl~l~~dG~~~~~~~D~W~~~~s~~I~PvGWc~~~g~~L~pP~~~ 85 (127)
T 1wjr_A 7 GPIDLITVGSLIELQDSQN-PFQYWIVSVIENVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMDPPSEI 85 (127)
T ss_dssp SHHHHCCTTCEEEEECSSC-SSCEEEEECCCEETTEEEECBTTCSSCCSSCEEEETTCSSCBCTTTHHHHCCCBCCCTTT
T ss_pred CchhhccCCCEeEEecCCC-CCcEEEEEEeeeeCCEEEEEecCCCCCCCCCEeEeCCCCCccccCcHHhhCCccCCcccc
Confidence 5678999999999999999 999999999999999999999999655589999999999999999999999999999999
Q ss_pred CCC-CCccc
Q psy15287 177 KRV-SPLFF 184 (186)
Q Consensus 177 ~~~-~~~~~ 184 (186)
... +.+-|
T Consensus 86 ~~~~~~~~W 94 (127)
T 1wjr_A 86 YPLKMASEW 94 (127)
T ss_dssp TTTSCHHHH
T ss_pred cCCCCcCCH
Confidence 864 44555
No 17
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=99.92 E-value=6.3e-25 Score=157.63 Aligned_cols=73 Identities=26% Similarity=0.284 Sum_probs=69.7
Q ss_pred CCCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCeeeeeceeccCCcccC
Q psy15287 97 MPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPVGWCRRNKVKLVP 172 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~PvGwc~~~g~~L~p 172 (186)
.+.+.|++||||||+|..+ +..+|+|||+++.|.+++|||||| ++++|+|++.+|++|||+|||..+++.|+.
T Consensus 15 ~~~~~F~vGmkLEA~D~~~-~~~~a~i~~v~~~~~~v~VHfdGW--~~~yDeWv~~dS~~I~P~g~~~~~~~~l~~ 87 (88)
T 2eqm_A 15 RPGITFEIGARLEALDYLQ-KWYPSRIEKIDYEEGKMLVHFERW--SHRYDEWIYWDSNRLRPLERPALRKEGLKD 87 (88)
T ss_dssp CSSCCCCSSCEEEEECTTS-CEEEEEEEEEETTTTEEEEEESSS--TTTEEEEEETTSCCEECCCCCCTTCTTCCC
T ss_pred CCcCcCCCCCEEEEEcCCC-CeeEEEEEEEeccCCEEEEEECCC--CCcccEEeeCCCCcEeccccccccccccCC
Confidence 5689999999999999999 999999999999999999999999 899999999999999999999999999974
No 18
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=99.90 E-value=2.5e-24 Score=164.11 Aligned_cols=75 Identities=24% Similarity=0.475 Sum_probs=66.8
Q ss_pred CceEEEEcCCCC--CCcEEEeCCCCCcccCchhHhhCCccCCCCCCCCCCCCCCCCHHHHHHhh--CC--CCCCCCCccc
Q psy15287 1 PRIRLHFDGYPD--RFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHVT--KS--MAAPPHCFTS 74 (186)
Q Consensus 1 ~r~~lhfdG~~~--~~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~~~~~~~~f~W~~YL~~~--~~--~~aP~~~F~~ 74 (186)
.||+||||||++ ++||||+++|++|||||||+++|+.|+||.+|... ...|+|++||+++ ++ .+||.++|+.
T Consensus 40 ~rl~l~~dG~~~~~~~D~W~~~~s~~I~PvGWc~~~g~~L~pP~~~~~~--~~~~~W~~yL~~~l~~a~~~~~P~~lFk~ 117 (127)
T 1wjr_A 40 GRLRLRYVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMDPPSEIYPL--KMASEWKCTLEKSLIDAAKFPLPMEVFKD 117 (127)
T ss_dssp TEEEECBTTCSSCCSSCEEEETTCSSCBCTTTHHHHCCCBCCCTTTTTT--SCHHHHHHHHHHHHHHHHHSCCCGGGGCC
T ss_pred CEEEEEecCCCCCCCCCEeEeCCCCCccccCcHHhhCCccCCcccccCC--CCcCCHHHHHHHHhcccccccCCHHHhCC
Confidence 489999999998 78999999999999999999999999999999731 2569999999993 55 8999999999
Q ss_pred CCC
Q psy15287 75 SHS 77 (186)
Q Consensus 75 ~~~ 77 (186)
.+.
T Consensus 118 ~~~ 120 (127)
T 1wjr_A 118 HAD 120 (127)
T ss_dssp CCC
T ss_pred CCC
Confidence 763
No 19
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=99.87 E-value=3e-22 Score=137.51 Aligned_cols=60 Identities=28% Similarity=0.442 Sum_probs=56.1
Q ss_pred CCCCCCCCcccEEEeecCCCCCccEEEEEEEee--eCCeEEEEecCCCCCCCCCeEEeCCCCCeeee
Q psy15287 96 HMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDV--IGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPV 160 (186)
Q Consensus 96 ~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v--~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~Pv 160 (186)
....+.|++||||||+|+++ +. |+|||++| .|.+++|||||| ++++|+||+.+|++||||
T Consensus 7 ~~~~~~F~vGmkLEa~d~~~-p~--~~AtV~~v~~~~~~~~VhfdGw--~~~~D~W~~~dS~~i~Pv 68 (69)
T 3sd4_A 7 NRRGISFEVGAQLEARDRLK-NW--YPAHIEDIDYEEGKVLIHFKRW--NHRYDEWFCWDSPYLRPL 68 (69)
T ss_dssp CCTTCCCSTTCEEEEECTTS-CE--EEEEEEEEETTTTEEEEEETTS--CGGGCEEEETTCTTEECC
T ss_pred CCCCCCcCCCCEEEEEECCC-Cc--cccEEEEEeccCCEEEEEeCCC--CCCCCEEEcCCCCCeeEC
Confidence 35688999999999999999 74 99999998 799999999999 889999999999999998
No 20
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=99.73 E-value=1.1e-18 Score=129.15 Aligned_cols=45 Identities=33% Similarity=0.949 Sum_probs=43.8
Q ss_pred CceEEEEcCCCCCCcEEEeCCCCCcccCchhHhhCCccCCCCCCC
Q psy15287 1 PRIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPPASTP 45 (186)
Q Consensus 1 ~r~~lhfdG~~~~~dfW~~~~S~~IhPvGw~~~~g~~L~pP~g~~ 45 (186)
.||+||||||++.+||||+++|++|||||||+++|+.|+||.+|.
T Consensus 42 ~rl~v~fDGw~~~~D~W~~~dSpdIhPVGWc~~~g~~LqpP~~~~ 86 (107)
T 1wjq_A 42 HRVKVHFDGWNNCYDYWIDADSPDIHPVGWCSKTGHPLQPPLSPL 86 (107)
T ss_dssp SCEEEECSSSCGGGCEEECTTCSSCEETTHHHHHTCCCBCCSCTT
T ss_pred CEEEEEeCCCCCcCCEEEECCCCCcccCcHHHhcCCCCCCCCCcC
Confidence 489999999999999999999999999999999999999999998
No 21
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=99.36 E-value=2.5e-13 Score=97.06 Aligned_cols=40 Identities=20% Similarity=0.420 Sum_probs=37.6
Q ss_pred CceEEEEcCCCCCCcEEEeCCCCCcccCchhHhhCCccCC
Q psy15287 1 PRIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYP 40 (186)
Q Consensus 1 ~r~~lhfdG~~~~~dfW~~~~S~~IhPvGw~~~~g~~L~p 40 (186)
.|++||||||++.+||||+++|++|||+|||+.++..|+.
T Consensus 48 ~~v~VHfdGW~~~yDeWv~~dS~~I~P~g~~~~~~~~l~~ 87 (88)
T 2eqm_A 48 GKMLVHFERWSHRYDEWIYWDSNRLRPLERPALRKEGLKD 87 (88)
T ss_dssp TEEEEEESSSTTTEEEEEETTSCCEECCCCCCTTCTTCCC
T ss_pred CEEEEEECCCCCcccEEeeCCCCcEeccccccccccccCC
Confidence 4899999999999999999999999999999999988874
No 22
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=98.81 E-value=1.9e-09 Score=73.41 Aligned_cols=28 Identities=29% Similarity=0.692 Sum_probs=26.7
Q ss_pred CceEEEEcCCCCCCcEEEeCCCCCcccC
Q psy15287 1 PRIRLHFDGYPDRFDFWVNCNHPDLYPC 28 (186)
Q Consensus 1 ~r~~lhfdG~~~~~dfW~~~~S~~IhPv 28 (186)
.|++||||||++.+||||+++|++||||
T Consensus 41 ~~~~VhfdGw~~~~D~W~~~dS~~i~Pv 68 (69)
T 3sd4_A 41 GKVLIHFKRWNHRYDEWFCWDSPYLRPL 68 (69)
T ss_dssp TEEEEEETTSCGGGCEEEETTCTTEECC
T ss_pred CEEEEEeCCCCCCCCEEEcCCCCCeeEC
Confidence 4899999999999999999999999998
No 23
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=97.75 E-value=7e-05 Score=56.60 Aligned_cols=58 Identities=17% Similarity=0.200 Sum_probs=44.5
Q ss_pred CCCCCcccEEEeecCCC--CCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCeeee
Q psy15287 99 PSVFKIGRKLEAIDKKG--GSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPV 160 (186)
Q Consensus 99 ~~~F~vGmkLEa~d~~~--~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~Pv 160 (186)
...|.+||++|+..+.+ .|.-.|.|+|+++.|....|.|+|| +..++-|+. ...|.|+
T Consensus 58 ~~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg~f~~V~y~~~--~~~~~EiV~--~~rlR~~ 117 (128)
T 3h8z_A 58 NKEITEGDEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAAC--DATYNEIVT--LERLRPV 117 (128)
T ss_dssp --CCCTTCEEEEEECC---CCCEEEEEEEEEEETTEEEEEETTC------CEEEC--GGGEEEC
T ss_pred ccCCCCCCEEEEEecCCCCCcCccEEEEEEEeeCCEEEEEEcCC--CCCcceEEe--hhheEeC
Confidence 36799999999999864 2677999999999999999999999 788899997 4456665
No 24
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.51 E-value=0.00046 Score=48.74 Aligned_cols=65 Identities=12% Similarity=0.238 Sum_probs=53.2
Q ss_pred CCCCCCCcccEEEeecCC--CCCccEEEEEEEeeeC----CeEEEEecCCCCCCCCCeEEeCCCCCeeeeecee
Q psy15287 97 MPPSVFKIGRKLEAIDKK--GGSNLFHVATVRDVIG----TRLHIHIDSAGSSDRMDYWTDIGSAYIRPVGWCR 164 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~--~~~~~i~vAtV~~v~g----~~l~v~~dg~~~d~~~d~W~d~~S~~I~PvGwc~ 164 (186)
.....|++|.||.+.... . ...++.|.|+++.. ....|||.|| +.+.|.|+..+.-++-.+.|-.
T Consensus 5 ~~~~~~~vG~kv~v~~~~~~~-~~~~y~AkIl~i~~~~~~~~YyVHY~g~--NkRlDEWV~~~rl~~~~~~~p~ 75 (87)
T 2eko_A 5 SSGGEIIEGCRLPVLRRNQDN-EDEWPLAEILSVKDISGRKLFYVHYIDF--NRRLDEWVTHERLDLKKIQFPK 75 (87)
T ss_dssp CSSCSCCTTCEEEBCEECTTC-CEECCEEEEEEECCSSSCCCEEEEECSS--CSCCCEEECTTTBCGGGCCCCC
T ss_pred cccccccCCCEEEEEEcccCC-CCeEEEEEEEEEEEcCCCcEEEEEeCCC--CcccccccCHhHcccccccCCC
Confidence 456789999999999852 3 34789999999984 3699999999 8999999999988887766643
No 25
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=97.06 E-value=0.001 Score=45.77 Aligned_cols=54 Identities=15% Similarity=0.160 Sum_probs=43.4
Q ss_pred CCCCcccEEEeecCCCCCccEEEEEEEeeeCC----eEEEEecCCCCCCCCCeEEeCCCC
Q psy15287 100 SVFKIGRKLEAIDKKGGSNLFHVATVRDVIGT----RLHIHIDSAGSSDRMDYWTDIGSA 155 (186)
Q Consensus 100 ~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~----~l~v~~dg~~~d~~~d~W~d~~S~ 155 (186)
..|++|.|+.+.........++.|.|++|... ...|||.|| +.+.|.|+..+.-
T Consensus 4 ~~~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY~gw--nkr~DEWV~~~ri 61 (76)
T 2lcc_A 4 EPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGW--NVRYDEWVKADRI 61 (76)
T ss_dssp CCSSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETTS--CCSSCEEEEGGGE
T ss_pred cccCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEeCCc--CCCceEecChhhc
Confidence 46899999999987421347999999999722 479999999 8899999986653
No 26
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=96.95 E-value=0.0015 Score=47.36 Aligned_cols=51 Identities=22% Similarity=0.352 Sum_probs=42.4
Q ss_pred CCCCCCCcccEEEeecCCCCCccEEEEEEEeee----CCeEEEEecCCCCCCCCCeEEeCC
Q psy15287 97 MPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVI----GTRLHIHIDSAGSSDRMDYWTDIG 153 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~----g~~l~v~~dg~~~d~~~d~W~d~~ 153 (186)
.+...|++|.++.+.+ . + .++.|.|++|. +....|||.|| ..+.|.|+..+
T Consensus 18 ~~~~~f~vGekVl~~~--~-~-~~YeAkIl~v~~~~~~~~Y~VHY~Gw--NkR~DEWV~~~ 72 (102)
T 2f5k_A 18 DPKPKFQEGERVLCFH--G-P-LLYEAKCVKVAIKDKQVKYFIHYSGW--NKNWDEWVPES 72 (102)
T ss_dssp CCSCSCCTTCEEEEES--S-S-SEEEEEEEEEEEETTEEEEEEEETTS--CGGGCEEEEGG
T ss_pred CCCcccCCCCEEEEEE--C-C-EEEEEEEEEEEEcCCCcEEEEEeCCc--CCCceeeccHh
Confidence 3456799999999988 2 2 79999999998 33699999999 88999999844
No 27
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=96.94 E-value=0.0035 Score=47.41 Aligned_cols=56 Identities=21% Similarity=0.349 Sum_probs=46.1
Q ss_pred CCCCCCcccEEEeecCCCCCccEEEEEEEeee-----CC-eEEEEecCCCCCCCCCeEEeCCCCCee
Q psy15287 98 PPSVFKIGRKLEAIDKKGGSNLFHVATVRDVI-----GT-RLHIHIDSAGSSDRMDYWTDIGSAYIR 158 (186)
Q Consensus 98 ~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~-----g~-~l~v~~dg~~~d~~~d~W~d~~S~~I~ 158 (186)
....|++|.++-+..... .++.|.|++|. |. ...|||.|| +.+.|.|+..+.-++-
T Consensus 9 ~~~~~~vGe~v~~~~~d~---~~y~AkIl~i~~~~~~~~~~YyVHY~gw--NkR~DEWV~~~ri~~~ 70 (133)
T 1wgs_A 9 PEVTVEIGETYLCRRPDS---TWHSAEVIQSRVNDQEGREEFYVHYVGF--NRRLDEWVDKNRLALT 70 (133)
T ss_dssp CCCCCCTTSEEEEEETTT---EEEEEEEEEEEEETTTTEEEEEEECTTT--CSSCCEEECTTTSCCT
T ss_pred cccccCCCCEEEEEeCCC---CEEEEEEEEEEeccCCCceEEEEeccCc--CCCceeecChhhcccc
Confidence 456799999999998744 79999999987 22 599999999 8899999987766544
No 28
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.003 Score=44.95 Aligned_cols=56 Identities=11% Similarity=0.112 Sum_probs=45.8
Q ss_pred CCCCCCCcccEEEeecCCCCCccEEEEEEEeeeC----CeEEEEecCCCCCCCCCeEEeCCCCCee
Q psy15287 97 MPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIG----TRLHIHIDSAGSSDRMDYWTDIGSAYIR 158 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g----~~l~v~~dg~~~d~~~d~W~d~~S~~I~ 158 (186)
.....|++|.++-+.. . . .++.|.|+++.. ....|||.|| +.+.|.|+..+.-++-
T Consensus 19 ~~~~~~~vG~kv~v~~--~-~-~~y~AkIl~ir~~~~~~~YyVHY~g~--NkRlDEWV~~~rl~l~ 78 (92)
T 2ro0_A 19 NSVDDIIIKCQCWVQK--N-D-EERLAEILSINTRKAPPKFYVHYVNY--NKRLDEWITTDRINLD 78 (92)
T ss_dssp SCTTSCCTTCEEEEEE--T-T-EEEEEEEEEEECSSSSCEEEEEETTS--CTTSCEEEEGGGEETT
T ss_pred cccccccCCCEEEEEE--C-C-EEEEEEEEEEEEcCCCcEEEEEeCCc--CcccccccCHhHcccc
Confidence 3566799999999985 3 2 799999999872 4699999999 8999999987765543
No 29
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=96.48 E-value=0.01 Score=42.31 Aligned_cols=56 Identities=13% Similarity=0.150 Sum_probs=45.7
Q ss_pred CCCCCCCcccEEEeecCCCCCccEEEEEEEeeeC----CeEEEEecCCCCCCCCCeEEeCCCCCee
Q psy15287 97 MPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIG----TRLHIHIDSAGSSDRMDYWTDIGSAYIR 158 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g----~~l~v~~dg~~~d~~~d~W~d~~S~~I~ 158 (186)
.....|++|.|+=+.. . + .++.|+|+++.. ....|||.|| +.+.|.|+..+.-++-
T Consensus 21 ~~~~~~~vG~kv~v~~--~-~-~~yeAeIl~ir~~~g~~~YYVHY~g~--NkRlDEWV~~~RI~l~ 80 (94)
T 2rnz_A 21 MSVDDIIIKCQCWVQK--N-D-EERLAEILSINTRKAPPKFYVHYVNY--NKRLDEWITTDRINLD 80 (94)
T ss_dssp SCGGGCCTTEEEEEEC--S-S-CEEEEEEEEEECSSSSCEEEEECTTS--CSTTCEEEETTTBCSS
T ss_pred cccccccCCCEEEEEE--C-C-EEEEEEEEEEEEcCCCcEEEEEeCCc--CcccccccCHHHcccc
Confidence 3456699999999985 3 3 799999999872 4699999999 8999999998776553
No 30
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=95.02 E-value=0.0011 Score=46.59 Aligned_cols=51 Identities=20% Similarity=0.209 Sum_probs=42.0
Q ss_pred CCCCCCCcccEEEeecCCCCCccEEEEEEEeee----CCeEEEEecCCCCCCCCCeEEeCC
Q psy15287 97 MPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVI----GTRLHIHIDSAGSSDRMDYWTDIG 153 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~----g~~l~v~~dg~~~d~~~d~W~d~~ 153 (186)
.+...|++|.++.+.+. + .++.|.|++|. .....|||.|| +.+.|.|+..+
T Consensus 8 ~~~~~~~~Gekv~~~~~---~-~~y~AkIl~i~~~~~~~~YyVHY~Gw--NkR~DEWV~~~ 62 (85)
T 2lrq_A 8 DANTLFVDGERVLCFHG---P-LIYEAKVLKTKPDATPVEYYIHYAGW--SKNWDEWVPEN 62 (85)
Confidence 45667999999999883 2 46999999987 24699999999 88999999854
No 31
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=95.94 E-value=0.017 Score=41.75 Aligned_cols=54 Identities=13% Similarity=0.152 Sum_probs=43.3
Q ss_pred CCCCCCCcccEEEeecCC--CCCccEEEEEEEeeeC---------CeEEEEecCCCCCCCCCeEEeCC
Q psy15287 97 MPPSVFKIGRKLEAIDKK--GGSNLFHVATVRDVIG---------TRLHIHIDSAGSSDRMDYWTDIG 153 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~--~~~~~i~vAtV~~v~g---------~~l~v~~dg~~~d~~~d~W~d~~ 153 (186)
.....|++|.++-+.... . -.+++-|.|++|.. ..-.|||.|| ..+.|.|+..+
T Consensus 15 ~~~~~f~~GEkVLc~h~d~~k-g~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GW--n~rwDEWV~ed 79 (101)
T 3m9q_A 15 DETPLFHKGEIVLCYEPDKSK-ARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGW--RPSYDRAVRAT 79 (101)
T ss_dssp CCCCCCCTTCEEEEECCCTTS-CCCEEEEEEEEEEEEECTTSCEEEEEEEEETTS--CGGGCEEECGG
T ss_pred cCCCcccCCCEEEEEecCCCC-CCcceEeEEEEEEecCCccccCceEEEEEeCCC--CcCceeecCHH
Confidence 346679999999998852 3 23799999999974 2689999999 88899999754
No 32
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=95.76 E-value=0.02 Score=41.92 Aligned_cols=56 Identities=20% Similarity=0.266 Sum_probs=42.0
Q ss_pred CCCCCCCCcccEEEeecCCCC-CccEEEEEEEeee---C------CeEEEEecCCCCCCCCCeEEeCC
Q psy15287 96 HMPPSVFKIGRKLEAIDKKGG-SNLFHVATVRDVI---G------TRLHIHIDSAGSSDRMDYWTDIG 153 (186)
Q Consensus 96 ~~~~~~F~vGmkLEa~d~~~~-~~~i~vAtV~~v~---g------~~l~v~~dg~~~d~~~d~W~d~~ 153 (186)
......|++|.||=+..+... ..+++-|.|++|. + ..-.|||.|| ..+.|.|+..+
T Consensus 14 ~~~k~~F~~gEkVLc~h~d~~kg~llYeAKIl~v~~~~~~~~~~~~~Y~VHY~GW--n~~WDEWV~~d 79 (110)
T 3oa6_A 14 EGMKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGW--NRSWDRWAAED 79 (110)
T ss_dssp ----CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTS--CGGGCEEEEGG
T ss_pred CCCCcccCCCCEEEEEecCCCCCcccEEEEEEEEEeccCCcCCcccEEEEEECCc--CcchhhccChh
Confidence 456788999999999776540 2389999999985 1 1489999999 88899999755
No 33
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=95.38 E-value=0.032 Score=40.87 Aligned_cols=54 Identities=20% Similarity=0.265 Sum_probs=40.6
Q ss_pred CCCCCCCCcccEEEeecCC--CCCccEEEEEEEeeeC---------CeEEEEecCCCCCCCCCeEEeC
Q psy15287 96 HMPPSVFKIGRKLEAIDKK--GGSNLFHVATVRDVIG---------TRLHIHIDSAGSSDRMDYWTDI 152 (186)
Q Consensus 96 ~~~~~~F~vGmkLEa~d~~--~~~~~i~vAtV~~v~g---------~~l~v~~dg~~~d~~~d~W~d~ 152 (186)
+-....|++|.+|=+.... . ..+++-|.|++|.. ..-.|||.|| ..+.|.|+..
T Consensus 14 ~~~~~~F~~GEkVLc~hgd~~k-~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~GW--n~~wDEWV~e 78 (110)
T 3m9p_A 14 EGMKFKFHSGEKVLCFEPDPTK-ARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGW--NRSWDRWAAE 78 (110)
T ss_dssp ----CCSCTTCEEEEECSCTTS-CCCEEEEEEEEEEEEECTTCCEEEEEEEEETTS--CGGGCEEEEG
T ss_pred cCCCCcccCCCEEEEEcCCCCC-CCCceeeEEEEEEeccCcccccceEEEEEECCC--CcchhhccCH
Confidence 4556779999999887553 2 24899999999962 2589999999 8889999964
No 34
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=93.97 E-value=0.18 Score=40.91 Aligned_cols=55 Identities=22% Similarity=0.387 Sum_probs=45.1
Q ss_pred CCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCCCCCeeee
Q psy15287 98 PPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPV 160 (186)
Q Consensus 98 ~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~S~~I~Pv 160 (186)
+.-.+++||++.+ +.+ ...+-|||++|.+..+.|.|+ ++....|+.-.|+.|.|+
T Consensus 155 pmv~~~~GQ~i~~-E~~---g~w~~~~V~~vD~SLv~v~f~----~dkr~EWIYRGS~Rl~pl 209 (213)
T 3dlm_A 155 PMVLLKSGQLIKT-EWE---GTWWKSRVEEVDGSLVRILFL----DDKRCEWIYRGSTRLEPM 209 (213)
T ss_dssp CCCCCCTTCEEEE-EET---TEEEEEEEEEEETTEEEEEET----TTTEEEEEETTCTTBCC-
T ss_pred ceEEcCCCCEEEE-Eec---CcEEEEEEEEEcceeEEEEEc----CCCeeEEEEcCCccchhc
Confidence 4556899999998 333 368999999999999999998 444579999999999986
No 35
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=93.45 E-value=0.51 Score=33.36 Aligned_cols=45 Identities=16% Similarity=0.183 Sum_probs=33.9
Q ss_pred ccEEEeecCCCCCccEEEEEEEeeeC-------CeEEEEecCCCCCCCCCeEEeCCC
Q psy15287 105 GRKLEAIDKKGGSNLFHVATVRDVIG-------TRLHIHIDSAGSSDRMDYWTDIGS 154 (186)
Q Consensus 105 GmkLEa~d~~~~~~~i~vAtV~~v~g-------~~l~v~~dg~~~d~~~d~W~d~~S 154 (186)
|-++=+..... .++.|.|+++.. ....|||.|| +.+.|.|+..+.
T Consensus 18 ~e~vlc~~~dg---~~yeAeIl~ir~~~~~~~~~~YYVHY~g~--NkRlDEWV~~~R 69 (92)
T 2bud_A 18 DKIYFIRREDG---TVHRGQVLQSRTTENAAAPDEYYVHYVGL--NRRLDGWVGRHR 69 (92)
T ss_dssp TSCEEEECTTS---CEEEEEEEEEECTTTCSSCCEEEEECSSS--CTTTCEEEETTT
T ss_pred CCEEEEEeCCC---CEEEEEEEEEeeccCCCCCcEEEEEeCCc--ccccccccCHHH
Confidence 33554444323 799999999872 2699999999 889999998765
No 36
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=92.11 E-value=0.31 Score=36.83 Aligned_cols=49 Identities=20% Similarity=0.381 Sum_probs=40.4
Q ss_pred CCCCCcccEEEeecCCCCCccEEEEEEEeeeC------------------------------C------------eEEEE
Q psy15287 99 PSVFKIGRKLEAIDKKGGSNLFHVATVRDVIG------------------------------T------------RLHIH 136 (186)
Q Consensus 99 ~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g------------------------------~------------~l~v~ 136 (186)
...|++|.++=+.+ . + +++-|.|++|.. . ...||
T Consensus 7 ~~~f~~gekvl~~h--g-~-llYeAKVl~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VH 82 (136)
T 2k3y_A 7 EQEFALGGRVLAFH--G-P-LMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKSFFIH 82 (136)
T ss_dssp GGSCCTTSEEEEEC--S-S-CEEEEEEEEEEETTTTEEEECSSCCCTTCSCCCSSBCCCCSCSSCCCCHHHHTSCEEEEC
T ss_pred ccccCCCCEEEEEE--C-C-eeEEEEEEEEEeccccccccccccccccccccccccccccccccccCcccccccceEEEE
Confidence 34699999998888 3 5 599999998772 1 68999
Q ss_pred ecCCCCCCCCCeEEeCC
Q psy15287 137 IDSAGSSDRMDYWTDIG 153 (186)
Q Consensus 137 ~dg~~~d~~~d~W~d~~ 153 (186)
|.|| ..+.|.|+..+
T Consensus 83 Y~GW--n~rwDEWV~~d 97 (136)
T 2k3y_A 83 YQGW--KSSWDEWVGYD 97 (136)
T ss_dssp CTTS--CGGGCEEEETT
T ss_pred eCCc--CCcceeeecHh
Confidence 9999 88899999875
No 37
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=91.22 E-value=1.1 Score=29.02 Aligned_cols=45 Identities=13% Similarity=0.152 Sum_probs=35.2
Q ss_pred CCCCcccEEEeecCCCCCccEEEEEEEeeeCC--eEEEEecCCCCCCCCCeEEeC
Q psy15287 100 SVFKIGRKLEAIDKKGGSNLFHVATVRDVIGT--RLHIHIDSAGSSDRMDYWTDI 152 (186)
Q Consensus 100 ~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~--~l~v~~dg~~~d~~~d~W~d~ 152 (186)
.+|++|+.+=|..... +++++||++|... .-.|+|+ | ...+|+..
T Consensus 2 ~~f~~GedVLarwsDG---~fYlGtI~~V~~~~~~clV~F~----D-~s~~W~~~ 48 (58)
T 4hcz_A 2 PRLWEGQDVLARWTDG---LLYLGTIKKVDSAREVCLVQFE----D-DSQFLVLW 48 (58)
T ss_dssp CSCCTTCEEEEECTTS---CEEEEEEEEEETTTTEEEEEET----T-SCEEEEEG
T ss_pred CccccCCEEEEEecCC---CEEeEEEEEEecCCCEEEEEEc----C-CCeEEEEh
Confidence 3588998887777666 9999999999844 7999995 2 24789864
No 38
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.20 E-value=0.77 Score=30.97 Aligned_cols=41 Identities=12% Similarity=0.079 Sum_probs=34.2
Q ss_pred CCCCCCCcccEEEeecCCCCCccEEEEEEEeeeC-CeEEEEecCC
Q psy15287 97 MPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIG-TRLHIHIDSA 140 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g-~~l~v~~dg~ 140 (186)
.....|++|.++.|.=..+ .++.|+|++|.+ +...|.|+++
T Consensus 5 ~~~~~~kvGd~clA~wsDg---~~Y~A~I~~v~~~~~~~V~f~Dy 46 (74)
T 2equ_A 5 SSGFDFKAGEEVLARWTDC---RYYPAKIEAINKEGTFTVQFYDG 46 (74)
T ss_dssp CSCCCCCTTCEEEEECSSS---SEEEEEEEEESTTSSEEEEETTS
T ss_pred cCCCCCCCCCEEEEECCCC---CEEEEEEEEECCCCEEEEEEecC
Confidence 3466799999999997633 799999999987 5799999755
No 39
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.19 E-value=1.1 Score=29.27 Aligned_cols=47 Identities=15% Similarity=0.274 Sum_probs=36.8
Q ss_pred CCCCCCcccEEEeecCCCCCccEEEEEEEeee--CCeEEEEecCCCCCCCCCeEEeC
Q psy15287 98 PPSVFKIGRKLEAIDKKGGSNLFHVATVRDVI--GTRLHIHIDSAGSSDRMDYWTDI 152 (186)
Q Consensus 98 ~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~--g~~l~v~~dg~~~d~~~d~W~d~ 152 (186)
-...|++|+-+=|..... +++++||++|. ..+-.|+|. |+ ..+|+..
T Consensus 4 g~~~f~eGqdVLarWsDG---lfYlgtV~kV~~~~~~ClV~Fe----D~-s~~wv~~ 52 (63)
T 2e5q_A 4 GSSGLTEGQYVLCRWTDG---LYYLGKIKRVSSSKQSCLVTFE----DN-SKYWVLW 52 (63)
T ss_dssp SCCCCCTTCEEEEECTTS---CEEEEEECCCCSTTSEEEEEET----TS-CEEEEEG
T ss_pred CccceecCCEEEEEecCC---CEEEEEEEEEecCCCEEEEEEc----cC-ceeEEEe
Confidence 356799999987666666 99999999999 456899985 33 4799864
No 40
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=90.01 E-value=1.9 Score=28.70 Aligned_cols=48 Identities=19% Similarity=0.381 Sum_probs=38.3
Q ss_pred CCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCCCCCCCCCeEEeCC
Q psy15287 98 PPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIG 153 (186)
Q Consensus 98 ~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~~~d~~~d~W~d~~ 153 (186)
+...|++|+-+=+-.... +++.+||++....+-+|+|+ |...+|+...
T Consensus 12 pa~~~~~geDVL~rw~DG---~fYLGtIVd~~~~~ClV~Fe-----D~S~~Wv~~k 59 (69)
T 2xk0_A 12 PAVTYALQEDVFIKCNDG---RFYLGTIIDQTSDQYLIRFD-----DQSEQWCEPD 59 (69)
T ss_dssp CCCCCCTTCEEEEECTTS---CEEEEEEEEECSSCEEEEET-----TCCEEEECTT
T ss_pred cccccccCCeEEEEecCC---CEEEEEEEecCCceEEEEec-----CCcceeeeHH
Confidence 347899999887775555 99999999999999999996 3357998643
No 41
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=89.05 E-value=0.97 Score=33.80 Aligned_cols=48 Identities=21% Similarity=0.342 Sum_probs=36.9
Q ss_pred CCCCcccEEEeecCCCCCccEEEEEEEeee------------------------------------------CCeEEEEe
Q psy15287 100 SVFKIGRKLEAIDKKGGSNLFHVATVRDVI------------------------------------------GTRLHIHI 137 (186)
Q Consensus 100 ~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~------------------------------------------g~~l~v~~ 137 (186)
-.|++|-++-+.+.- +++-|.|++|. +..-.|||
T Consensus 6 p~f~~gE~VlcfHg~----~~YeAKIl~i~d~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY 81 (130)
T 3e9g_A 6 QEFALGGRCLAFHGP----LMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKCFFIHY 81 (130)
T ss_dssp -CCCTTCEEEEEETT----EEEEEEEEEEEETTTTEEEECC--------------CCBCCCTTCCCCTTTTTSCEEEEEE
T ss_pred ccccCCCEEEEEeCC----cceeeEEEEeeCCCcceeecccccccccccccccccccccccccccCchhhccCceEEEEe
Confidence 368999998888762 47888888883 12578999
Q ss_pred cCCCCCCCCCeEEeCC
Q psy15287 138 DSAGSSDRMDYWTDIG 153 (186)
Q Consensus 138 dg~~~d~~~d~W~d~~ 153 (186)
.|| ..+.|-|+..+
T Consensus 82 ~GW--n~~WDEWV~e~ 95 (130)
T 3e9g_A 82 QGW--KSSWDEWVGYD 95 (130)
T ss_dssp TTS--CGGGCEEEETT
T ss_pred CCC--CCChhhccCHh
Confidence 999 78889999654
No 42
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=88.25 E-value=2 Score=29.21 Aligned_cols=48 Identities=17% Similarity=0.196 Sum_probs=37.9
Q ss_pred CCCCCCcccEEEeecCCCCCccEEEEEEEeee--CCeEEEEecCCCCCCCCCeEEeCC
Q psy15287 98 PPSVFKIGRKLEAIDKKGGSNLFHVATVRDVI--GTRLHIHIDSAGSSDRMDYWTDIG 153 (186)
Q Consensus 98 ~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~--g~~l~v~~dg~~~d~~~d~W~d~~ 153 (186)
+...|.+|+-+=+..... +++.+||++|. +.+-+|+|+ +...+|+...
T Consensus 23 p~~~f~eGeDVLarwsDG---lfYLGTI~kV~~~~e~ClV~F~-----D~S~~W~~~k 72 (79)
T 2m0o_A 23 PRPRLWEGQDVLARWTDG---LLYLGTIKKVDSAREVCLVQFE-----DDSQFLVLWK 72 (79)
T ss_dssp CCCCCCTTCEEEBCCTTS---CCCEEEEEEEETTTTEEEEEET-----TSCEEEEETT
T ss_pred CcceeccCCEEEEEecCC---CEEeEEEEEeccCCCEEEEEEc-----CCCeEEEEee
Confidence 457899999877766666 89999999998 667999995 3357998754
No 43
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=87.91 E-value=3 Score=27.54 Aligned_cols=48 Identities=21% Similarity=0.321 Sum_probs=37.8
Q ss_pred CCCCCCCcccEEEeecCCCCCccEEEEEEEeeeC--CeEEEEecCCCCCCCCCeEEeC
Q psy15287 97 MPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIG--TRLHIHIDSAGSSDRMDYWTDI 152 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g--~~l~v~~dg~~~d~~~d~W~d~ 152 (186)
.....|++|+-+=|.-... +++.|||++|.. ..-.|+|. |+ ..+|+..
T Consensus 9 ~~~~~f~vGddVLA~wtDG---l~Y~gtI~~V~~~~gtC~V~F~----D~-s~~w~~~ 58 (66)
T 2eqj_A 9 KPACKFEEGQDVLARWSDG---LFYLGTIKKINILKQSCFIIFE----DS-SKSWVLW 58 (66)
T ss_dssp CCCCCSCTTCEEEEECTTS---CEEEEEEEEEETTTTEEEEEET----TT-EEEEEET
T ss_pred cccccccCCCEEEEEEccC---cEEEeEEEEEccCCcEEEEEEc----cC-CEEEEEe
Confidence 4566899999998888555 999999999995 57889984 22 4788864
No 44
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.95 E-value=4.2 Score=26.93 Aligned_cols=53 Identities=17% Similarity=0.188 Sum_probs=39.3
Q ss_pred CCCCCCcccEEEeecCCCCCccEEEEEEEeee--CCeEEEEecCCCCCCCCCeEEeCCCCCeeee
Q psy15287 98 PPSVFKIGRKLEAIDKKGGSNLFHVATVRDVI--GTRLHIHIDSAGSSDRMDYWTDIGSAYIRPV 160 (186)
Q Consensus 98 ~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~--g~~l~v~~dg~~~d~~~d~W~d~~S~~I~Pv 160 (186)
....|++|+-+=|..... +++++||++|. ..+-+|+|. |+ ..||+... +|++.
T Consensus 6 ~~~~f~eGqdVLarWsDG---lfYlGtV~kV~~~~~~ClV~Fe----D~-s~~wv~~k--di~~~ 60 (68)
T 2e5p_A 6 SGPRLWEGQDVLARWTDG---LLYLGTIKKVDSAREVCLVQFE----DD-SQFLVLWK--DISPA 60 (68)
T ss_dssp CCCCCCTTCEEEEECTTS---SEEEEEEEEEETTTTEEEEEET----TT-EEEEEETT--TEECC
T ss_pred CCcccccCCEEEEEecCC---cEEEeEEEEEecCCcEEEEEEc----cC-Ceeeeeee--ccccc
Confidence 356799999886666666 99999999999 456899995 33 47998653 44444
No 45
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=86.42 E-value=2.6 Score=29.26 Aligned_cols=43 Identities=19% Similarity=0.127 Sum_probs=34.4
Q ss_pred CCCCCCCcccEEEeecCCCCCccEEEEEEEeeeC--CeEEEEecCCC
Q psy15287 97 MPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIG--TRLHIHIDSAG 141 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g--~~l~v~~dg~~ 141 (186)
.+...+++|+.+-|.=..+ ..++-|+|.+|.+ ..+.|.|.+++
T Consensus 6 ~~~~~~kvGd~C~A~ys~D--g~wYrA~I~~i~~~~~~~~V~fiDYG 50 (88)
T 1g5v_A 6 ASLQQWKVGDKCSAIWSED--GCIYPATIASIDFKRETCVVVYTGYG 50 (88)
T ss_dssp ---CCCCSSCEEEEECTTT--CCEEEEEEEEEETTTTEEEEEETTTC
T ss_pred CccCCCCCCCEEEEEECCC--CCEEEEEEEEecCCCCEEEEEEecCC
Confidence 4556799999999987644 2799999999985 78999999984
No 46
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=85.23 E-value=3.9 Score=26.27 Aligned_cols=43 Identities=19% Similarity=0.234 Sum_probs=35.5
Q ss_pred CCCCCCCcccEEEeecCCCCCccEEEEEEEeeeC--CeEEEEecCCC
Q psy15287 97 MPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIG--TRLHIHIDSAG 141 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g--~~l~v~~dg~~ 141 (186)
++...+++|+++-|.=..+ ..++-|+|++|.+ ..+.|.|.+++
T Consensus 4 ~~~~~~~vGd~c~A~~s~D--g~wYrA~I~~v~~~~~~~~V~fvdYG 48 (64)
T 4a4f_A 4 QPTHSWKVGDKCMAVWSED--GQCYEAEIEEIDEENGTAAITFAGYG 48 (64)
T ss_dssp CCSSCCCTTCEEEEECTTT--SSEEEEEEEEEETTTTEEEEEETTTT
T ss_pred CcCCCCCCCCEEEEEECCC--CCEEEEEEEEEcCCCCEEEEEEEecC
Confidence 4567799999999986544 2799999999996 58999999884
No 47
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=84.40 E-value=3.1 Score=27.50 Aligned_cols=38 Identities=21% Similarity=0.154 Sum_probs=31.6
Q ss_pred CCCCCcccEEEeecCCCCCccEEEEEEEeeeCC-eEEEEecC
Q psy15287 99 PSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGT-RLHIHIDS 139 (186)
Q Consensus 99 ~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~-~l~v~~dg 139 (186)
...|++|.++-|.= . -..+++|+|++|.+. ...|.|++
T Consensus 4 ~~~~~vGd~vmArW--~-D~~yYpA~I~si~~~~~Y~V~F~d 42 (67)
T 3p8d_A 4 SSEFQINEQVLACW--S-DCRFYPAKVTAVNKDGTYTVKFYD 42 (67)
T ss_dssp -CCCCTTCEEEEEC--T-TSCEEEEEEEEECTTSEEEEEETT
T ss_pred CcccccCCEEEEEc--C-CCCEeeEEEEEECCCCeEEEEEeC
Confidence 34699999999996 3 458999999999985 68899974
No 48
>2jz2_A SSL0352 protein; SH3-like, synechocystis SP. PCC 6803, targe PSI, protein structure initiative, northeast structural GEN consortium, NESG; NMR {Synechocystis SP} PDB: 3c4s_A
Probab=83.76 E-value=1.8 Score=28.45 Aligned_cols=38 Identities=8% Similarity=0.093 Sum_probs=35.2
Q ss_pred CCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecCC
Q psy15287 102 FKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSA 140 (186)
Q Consensus 102 F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg~ 140 (186)
+-+||-+-+.|+.+ +..-.-..|++|.++++-|.|+|-
T Consensus 2 ilPG~~V~V~np~~-~Yy~y~G~VQRvsdgkaaVLFEGG 39 (66)
T 2jz2_A 2 IFPGATVRVTNVDD-TYYRFEGLVQRVSDGKAAVLFENG 39 (66)
T ss_dssp CCTTCEEEECCTTS-TTBTCEEEEEEEETTEEEEEEESS
T ss_pred ccCCCEEEEeCCCC-cccceeEEEEEecCCcEEEEecCC
Confidence 45899999999999 999999999999999999999984
No 49
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=83.21 E-value=3.1 Score=28.84 Aligned_cols=39 Identities=21% Similarity=0.136 Sum_probs=31.1
Q ss_pred CCCCCCcccEEEeecCCCCCccEEEEEEEeeeCC-eEEEEecC
Q psy15287 98 PPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGT-RLHIHIDS 139 (186)
Q Consensus 98 ~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~-~l~v~~dg 139 (186)
....|++|.++.|.= . -..+++|+|++|.+. ...|.|++
T Consensus 18 ~~~~f~vGd~VlArW--~-D~~yYPAkI~sV~~~~~YtV~F~D 57 (85)
T 3qii_A 18 GSSEFQINEQVLACW--S-DCRFYPAKVTAVNKDGTYTVKFYD 57 (85)
T ss_dssp ---CCCTTCEEEEEC--T-TSCEEEEEEEEECTTSEEEEEETT
T ss_pred CCcccccCCEEEEEe--C-CCCEeeEEEEEECCCCeEEEEEeC
Confidence 456799999999988 3 458999999999985 68899973
No 50
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=83.05 E-value=2.9 Score=31.11 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=29.4
Q ss_pred cccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecC
Q psy15287 104 IGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDS 139 (186)
Q Consensus 104 vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg 139 (186)
.+|.+|+.+... .+.-|+|++|....+.|.|+.
T Consensus 4 ~~~~VEV~~~~G---~~y~a~V~~v~~d~~~V~f~n 36 (128)
T 3h8z_A 4 QGLPVEVRGSNG---AFYKGFVKDVHEDSVTIFFEN 36 (128)
T ss_dssp TTCEEEEECTTS---CEEEEEEEEECSSEEEEEETT
T ss_pred cccEEEEecCCC---CEEEEEEEEEeCCcEEEEEcc
Confidence 589999999665 799999999999999999964
No 51
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=81.32 E-value=5.8 Score=24.93 Aligned_cols=40 Identities=20% Similarity=0.158 Sum_probs=32.7
Q ss_pred CCCCcccEEEeecCCCCCccEEEEEEEeeeC--CeEEEEecCCC
Q psy15287 100 SVFKIGRKLEAIDKKGGSNLFHVATVRDVIG--TRLHIHIDSAG 141 (186)
Q Consensus 100 ~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g--~~l~v~~dg~~ 141 (186)
+.+++|+.+-|.=..+ ..++-|+|+++.+ ..+.|.|.+++
T Consensus 2 ~~~~~G~~c~A~~s~D--g~wYrA~I~~i~~~~~~~~V~f~DYG 43 (59)
T 1mhn_A 2 QQWKVGDKCSAIWSED--GCIYPATIASIDFKRETCVVVYTGYG 43 (59)
T ss_dssp CCCCTTCEEEEECTTT--SCEEEEEEEEEETTTTEEEEEETTTT
T ss_pred CcCCcCCEEEEEECCC--CCEEEEEEEEEcCCCCEEEEEEEcCC
Confidence 3589999999986543 2799999999985 78999999884
No 52
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=76.57 E-value=2.7 Score=33.29 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=27.8
Q ss_pred CCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEec
Q psy15287 101 VFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHID 138 (186)
Q Consensus 101 ~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~d 138 (186)
..++||++++.++.. ..+++|++|.+..|.|-|.
T Consensus 89 ~~~~G~~~~~~~~~G----~~~~~V~~v~~~~V~vD~N 122 (196)
T 2kfw_A 89 ELQVGMRFLAETDQG----PVPVEITAVEDDHVVVDGN 122 (196)
T ss_dssp CCCTTCEEEEEETTE----EEEEEBCCCCSSSEEECCC
T ss_pred CcccCCEEEEECCCC----cEEEEEEEEcCCEEEEeCC
Confidence 478999999876654 4689999999999988764
No 53
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.30 E-value=4.5 Score=28.03 Aligned_cols=30 Identities=23% Similarity=0.448 Sum_probs=24.5
Q ss_pred ceEEEEcCCCCCCcEEEeCCCCCcccCchh
Q psy15287 2 RIRLHFDGYPDRFDFWVNCNHPDLYPCGWN 31 (186)
Q Consensus 2 r~~lhfdG~~~~~dfW~~~~S~~IhPvGw~ 31 (186)
...|||.||....|=|+..+.-.+-.+-|-
T Consensus 45 ~YyVHY~g~NkRlDEWV~~~rl~~~~~~~p 74 (87)
T 2eko_A 45 LFYVHYIDFNRRLDEWVTHERLDLKKIQFP 74 (87)
T ss_dssp CEEEEECSSCSCCCEEECTTTBCGGGCCCC
T ss_pred EEEEEeCCCCcccccccCHhHcccccccCC
Confidence 468999999999999999988777655443
No 54
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=69.97 E-value=16 Score=22.30 Aligned_cols=38 Identities=24% Similarity=0.219 Sum_probs=30.4
Q ss_pred CCcccEEEeecCCCCCccEEEEEEEeee--CCeEEEEecCCC
Q psy15287 102 FKIGRKLEAIDKKGGSNLFHVATVRDVI--GTRLHIHIDSAG 141 (186)
Q Consensus 102 F~vGmkLEa~d~~~~~~~i~vAtV~~v~--g~~l~v~~dg~~ 141 (186)
+++|+.+-|.=..+ ..++-|+|+++. +..+.|.|.+++
T Consensus 2 wk~G~~c~A~~s~D--g~wYrA~I~~i~~~~~~~~V~fvDYG 41 (54)
T 3s6w_A 2 WKPGDECFALYWED--NKFYRAEVEALHSSGMTAVVKFIDYG 41 (54)
T ss_dssp CCTTCEEEEEETTT--TEEEEEEEEEC--CCSEEEEEETTTC
T ss_pred CCCCCEEEEEECCC--CCEEEEEEEEEeCCCCEEEEEEEccC
Confidence 78999999986544 279999999997 457999999884
No 55
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=64.57 E-value=12 Score=28.67 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=29.3
Q ss_pred CCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEec
Q psy15287 101 VFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHID 138 (186)
Q Consensus 101 ~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~d 138 (186)
..++||.+++-++.. ...+++|++|.+..+.|-|.
T Consensus 112 ~~~~G~~~~~~~~~G---~~~~~~V~~v~~~~V~vD~N 146 (169)
T 4dt4_A 112 EPEIGAIMLFTAMDG---SEMPGVIREINGDSITVDFN 146 (169)
T ss_dssp CCCTTCEEEEECTTS---CEEEEEEEEEETTEEEEECS
T ss_pred CCCCCcEEEEECCCC---CEEEEEEEEEcCCEEEEeCC
Confidence 478999999988766 46789999999999988763
No 56
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=62.89 E-value=14 Score=27.92 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=29.7
Q ss_pred CCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEec
Q psy15287 101 VFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHID 138 (186)
Q Consensus 101 ~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~d 138 (186)
..++||.+++.++.. ...+++|++|.+..+.|-|.
T Consensus 84 ~~~~G~~~~~~~~~G---~~~~~~V~~v~~~~v~vD~N 118 (158)
T 3cgm_A 84 EVVPGAQFYAQDMEG---NPMPLTVVAVEGEEVTVDFN 118 (158)
T ss_dssp CCCTTCEEEEEETTT---EEEEEEEEEEETTEEEEECS
T ss_pred CCccCCEEEEECCCC---CEEEEEEEEECCCEEEEeCC
Confidence 478999999987765 56789999999999998774
No 57
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=61.98 E-value=16 Score=27.19 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=29.9
Q ss_pred CCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEec
Q psy15287 101 VFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHID 138 (186)
Q Consensus 101 ~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~d 138 (186)
..++||.+++.++.. ...+++|++|.+..+.|-|.
T Consensus 93 ~~~~G~~~~~~~~~G---~~~~~~V~~v~~~~v~vD~N 127 (151)
T 2kr7_A 93 ELEKGMSVFGQTEDN---QTIQAIIKDFSATHVMVDYN 127 (151)
T ss_dssp CCCTTCEEEEEETTT---EEEEEEEEEECSSEEEEEEC
T ss_pred CCccCCEEEEECCCC---CEEEEEEEEECCCEEEEECC
Confidence 578999999988776 45689999999999998874
No 58
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=61.56 E-value=32 Score=22.74 Aligned_cols=43 Identities=21% Similarity=0.183 Sum_probs=34.7
Q ss_pred CCCCCCCcccEEEeecCCCCCccEEEEEEEeeeC--CeEEEEecCCC
Q psy15287 97 MPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIG--TRLHIHIDSAG 141 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g--~~l~v~~dg~~ 141 (186)
.....+++|+.+-|.=..+ ..++-|+|+++.+ ..+.|.|..++
T Consensus 5 ~~~~~~~~G~~c~A~~s~D--g~wYRA~I~~i~~~~~~~~V~fiDYG 49 (78)
T 2d9t_A 5 SSGKVWKPGDECFALYWED--NKFYRAEVEALHSSGMTAVVKFTDYG 49 (78)
T ss_dssp CCCCCCCTTCEEEEECTTT--CCEEEEEEEEECSSSSEEEEEETTTT
T ss_pred CCccCCCcCCEEEEEECCC--CCEEEEEEEEEeCCCCEEEEEEEcCC
Confidence 4566789999999986543 2699999999986 78999998873
No 59
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=58.70 E-value=7.2 Score=26.42 Aligned_cols=29 Identities=10% Similarity=0.107 Sum_probs=20.2
Q ss_pred CCCCCCCcccEEEeecCCCCCccEEEEEE
Q psy15287 97 MPPSVFKIGRKLEAIDKKGGSNLFHVATV 125 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~~~~~i~vAtV 125 (186)
...|.|.+|..||++.|...+..+.|..+
T Consensus 25 e~rN~f~~GD~iEi~~P~g~~~~~~v~~m 53 (89)
T 4he6_A 25 QQRNHFRPGDEVEFFGPEIENFTQVIEKI 53 (89)
T ss_dssp EESSCBCTTCEEEEESTTSCCEEEECCCE
T ss_pred EEcCCcCCCCEEEEEcCCCCcEEEEeHHe
Confidence 35899999999999998762323333333
No 60
>2l1t_A Uncharacterized protein; putative C-DI-GMP binding, GSU3033, PILZ, structural genomic biology, protein structure initiative; NMR {Geobacter sulfurreducens}
Probab=57.98 E-value=13 Score=26.90 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=32.1
Q ss_pred CCCCCcccEEEeecCCCCCccE-EEEEEEeeeCCeEEEEecC
Q psy15287 99 PSVFKIGRKLEAIDKKGGSNLF-HVATVRDVIGTRLHIHIDS 139 (186)
Q Consensus 99 ~~~F~vGmkLEa~d~~~~~~~i-~vAtV~~v~g~~l~v~~dg 139 (186)
.+-|++|||+|+-=|+.+...+ -=|-|+++.++.++|.+.+
T Consensus 10 ~~yF~~gqrv~V~ipL~~~~~F~dwAiIt~~~~dli~lqLsr 51 (109)
T 2l1t_A 10 GRYFEQLQKVNLTVRLGDTGSFDGTAAITSLKGSLAWLELFG 51 (109)
T ss_dssp GGTCCTTCEEEEEEEETTTEEEEEEEEEEEEETTEEEECCSS
T ss_pred HHhcCCCcEEEEEEEcCCCCeEcCceEEEEecCCEEEEEeec
Confidence 4569999999998877633333 4588999999999999864
No 61
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=56.83 E-value=14 Score=28.37 Aligned_cols=34 Identities=12% Similarity=0.212 Sum_probs=28.6
Q ss_pred CCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEec
Q psy15287 101 VFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHID 138 (186)
Q Consensus 101 ~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~d 138 (186)
..++||.+++.++.. . .+++|++|.+..+.|-|.
T Consensus 89 ~~~~G~~~~~~~~~G-~---~~~~V~~v~~~~V~vD~N 122 (171)
T 2k8i_A 89 ELQVGMRFLAETDQG-P---VPVEITAVEDDHVVVDGN 122 (171)
T ss_dssp CCCTTCEEEEEETTE-E---EEEEEEEECSSEEEEESC
T ss_pred CccCCcEEEEECCCC-c---EEEEEEEEcCCEEEEeCC
Confidence 578999999988776 3 599999999999888763
No 62
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=54.93 E-value=7.7 Score=26.03 Aligned_cols=21 Identities=29% Similarity=0.695 Sum_probs=18.0
Q ss_pred eEEEEcCCCCCCcEEEeCCCC
Q psy15287 3 IRLHFDGYPDRFDFWVNCNHP 23 (186)
Q Consensus 3 ~~lhfdG~~~~~dfW~~~~S~ 23 (186)
.+|||.||....|=|+..+.-
T Consensus 41 Y~VHY~gwnkr~DEWV~~~ri 61 (76)
T 2lcc_A 41 YLVHYYGWNVRYDEWVKADRI 61 (76)
T ss_dssp EEEEETTSCCSSCEEEEGGGE
T ss_pred EEEEeCCcCCCceEecChhhc
Confidence 589999999999999987543
No 63
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.04 E-value=21 Score=22.48 Aligned_cols=38 Identities=18% Similarity=0.215 Sum_probs=30.7
Q ss_pred CCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEec
Q psy15287 98 PPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHID 138 (186)
Q Consensus 98 ~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~d 138 (186)
....|++|..+|+++--- .=-.|+|+++.+.++.|..+
T Consensus 4 ~~~~f~~GD~V~V~~Gpf---~g~~G~V~evd~e~v~V~v~ 41 (59)
T 2e6z_A 4 GSSGFQPGDNVEVCEGEL---INLQGKILSVDGNKITIMPK 41 (59)
T ss_dssp CCSSCCTTSEEEECSSTT---TTCEEEECCCBTTEEEEEEC
T ss_pred ccccCCCCCEEEEeecCC---CCCEEEEEEEeCCEEEEEEE
Confidence 456699999999998543 33469999999999888886
No 64
>1qp2_A Protein (PSAE protein); mainly beta, roll, pleckstrin topology, SH3-like, electron T; NMR {Nostoc SP} SCOP: b.34.4.2 PDB: 1qp3_A
Probab=50.19 E-value=20 Score=23.80 Aligned_cols=38 Identities=16% Similarity=0.212 Sum_probs=28.4
Q ss_pred CCcccEEEeecCCCCCccEEEEEEEeeeCCe----EEEEecCC
Q psy15287 102 FKIGRKLEAIDKKGGSNLFHVATVRDVIGTR----LHIHIDSA 140 (186)
Q Consensus 102 F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~----l~v~~dg~ 140 (186)
++.|+++-++.+.. -.-=-+.+|+.|.... +.|+||+-
T Consensus 2 i~rGs~VrIlr~eS-ywy~~vG~V~~Vd~~~~~ypV~VrFekv 43 (70)
T 1qp2_A 2 VQRGSKVRILRPES-YWFQDVGTVASVDQSGIKYPVIVRFEKV 43 (70)
T ss_dssp CCTTCEEEECCTTS-TTTTCEEEEEEECCSSCSCSEEEECSSC
T ss_pred cCCCCEEEEcCccc-eeecceeEEEEEeCCCcEeeEEEEeccc
Confidence 57899999999887 4444467777776544 99999875
No 65
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=49.82 E-value=11 Score=27.83 Aligned_cols=25 Identities=32% Similarity=0.647 Sum_probs=20.4
Q ss_pred ceEEEEcCCCCCCcEEEeCCCCCcc
Q psy15287 2 RIRLHFDGYPDRFDFWVNCNHPDLY 26 (186)
Q Consensus 2 r~~lhfdG~~~~~dfW~~~~S~~Ih 26 (186)
..+|||.||....|=|+..+.-.+-
T Consensus 46 ~YyVHY~gwNkR~DEWV~~~ri~~~ 70 (133)
T 1wgs_A 46 EFYVHYVGFNRRLDEWVDKNRLALT 70 (133)
T ss_dssp EEEEECTTTCSSCCEEECTTTSCCT
T ss_pred EEEEeccCcCCCceeecChhhcccc
Confidence 3689999999999999988765443
No 66
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=47.39 E-value=13 Score=25.82 Aligned_cols=24 Identities=25% Similarity=0.707 Sum_probs=19.5
Q ss_pred ceEEEEcCCCCCCcEEEeCCCCCc
Q psy15287 2 RIRLHFDGYPDRFDFWVNCNHPDL 25 (186)
Q Consensus 2 r~~lhfdG~~~~~dfW~~~~S~~I 25 (186)
...|||.||....|=|+..+.-++
T Consensus 54 ~YyVHY~g~NkRlDEWV~~~rl~l 77 (92)
T 2ro0_A 54 KFYVHYVNYNKRLDEWITTDRINL 77 (92)
T ss_dssp EEEEEETTSCTTSCEEEEGGGEET
T ss_pred EEEEEeCCcCcccccccCHhHccc
Confidence 468999999999999998765433
No 67
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=45.30 E-value=21 Score=22.93 Aligned_cols=19 Identities=16% Similarity=-0.041 Sum_probs=13.6
Q ss_pred CCCCCCCcccEEEeecCCC
Q psy15287 97 MPPSVFKIGRKLEAIDKKG 115 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~ 115 (186)
...-.|+.|..|++++..+
T Consensus 19 ~~eLs~~~Gd~i~v~~~~~ 37 (73)
T 2lcs_A 19 DNELRLAEGDIVFISYKHG 37 (73)
T ss_dssp TTBCCBCTTCEEEEEEEET
T ss_pred CCccCCcCCCEEEEEEEcC
Confidence 3455688888888877655
No 68
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=43.66 E-value=11 Score=26.90 Aligned_cols=19 Identities=26% Similarity=0.735 Sum_probs=16.6
Q ss_pred ceEEEEcCCCCCCcEEEeC
Q psy15287 2 RIRLHFDGYPDRFDFWVNC 20 (186)
Q Consensus 2 r~~lhfdG~~~~~dfW~~~ 20 (186)
..+|||.||....|=|+..
T Consensus 53 ~Y~VHY~GwNkR~DEWV~~ 71 (102)
T 2f5k_A 53 KYFIHYSGWNKNWDEWVPE 71 (102)
T ss_dssp EEEEEETTSCGGGCEEEEG
T ss_pred EEEEEeCCcCCCceeeccH
Confidence 3689999999999999974
No 69
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=42.82 E-value=9.5 Score=27.13 Aligned_cols=20 Identities=25% Similarity=0.595 Sum_probs=16.7
Q ss_pred ceEEEEcCCCCCCcEEEeCC
Q psy15287 2 RIRLHFDGYPDRFDFWVNCN 21 (186)
Q Consensus 2 r~~lhfdG~~~~~dfW~~~~ 21 (186)
.-+|||.||..+.|=|+..+
T Consensus 60 ~Y~VHY~GWn~rwDEWV~ed 79 (101)
T 3m9q_A 60 EYKIHFQGWRPSYDRAVRAT 79 (101)
T ss_dssp EEEEEETTSCGGGCEEECGG
T ss_pred EEEEEeCCCCcCceeecCHH
Confidence 35799999999999999643
No 70
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=48.75 E-value=5.2 Score=27.42 Aligned_cols=38 Identities=21% Similarity=0.155 Sum_probs=30.1
Q ss_pred CCCCCcccEEEeecCCCCCccEEEEEEEeeeC-CeEEEEecC
Q psy15287 99 PSVFKIGRKLEAIDKKGGSNLFHVATVRDVIG-TRLHIHIDS 139 (186)
Q Consensus 99 ~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g-~~l~v~~dg 139 (186)
...|++|.++-|.=..+ .++.|+|++|.+ ....|.|+.
T Consensus 4 ~~~~kvGd~clAkwsDg---~wY~A~I~~v~~~~~y~V~F~D 42 (81)
T 2ldm_A 4 SSEFQINEQVLASWSDS---RFYPAKVTAVNKDGTYTVKFYD 42 (81)
Confidence 44589999999975533 799999999975 468889864
No 71
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=40.83 E-value=25 Score=26.08 Aligned_cols=31 Identities=16% Similarity=0.150 Sum_probs=25.8
Q ss_pred CCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecC
Q psy15287 101 VFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDS 139 (186)
Q Consensus 101 ~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg 139 (186)
..++||.+++-+ .+++|++|.+.++.|-|..
T Consensus 103 ~~~~G~~~~~~~--------~~~~V~~v~~~~v~vD~NH 133 (151)
T 1ix5_A 103 EPEEGMVILAEG--------IPATITEVTDNEVTLDFNH 133 (151)
T ss_dssp CCCTTEEEESSS--------CEEEEEEEETTEEEEECCC
T ss_pred cccccCEEEECC--------eEEEEEEEcCCEEEEeCCC
Confidence 478999999765 4789999999999998753
No 72
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=40.58 E-value=22 Score=24.83 Aligned_cols=24 Identities=25% Similarity=0.707 Sum_probs=19.7
Q ss_pred ceEEEEcCCCCCCcEEEeCCCCCc
Q psy15287 2 RIRLHFDGYPDRFDFWVNCNHPDL 25 (186)
Q Consensus 2 r~~lhfdG~~~~~dfW~~~~S~~I 25 (186)
...|||.||....|=|+..+.-++
T Consensus 56 ~YYVHY~g~NkRlDEWV~~~RI~l 79 (94)
T 2rnz_A 56 KFYVHYVNYNKRLDEWITTDRINL 79 (94)
T ss_dssp EEEEECTTSCSTTCEEEETTTBCS
T ss_pred EEEEEeCCcCcccccccCHHHccc
Confidence 357999999999999998865444
No 73
>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}
Probab=40.01 E-value=43 Score=22.77 Aligned_cols=29 Identities=10% Similarity=0.305 Sum_probs=20.0
Q ss_pred CCCCCCCCcccEEEeecCCC-CCccEEEEEE
Q psy15287 96 HMPPSVFKIGRKLEAIDKKG-GSNLFHVATV 125 (186)
Q Consensus 96 ~~~~~~F~vGmkLEa~d~~~-~~~~i~vAtV 125 (186)
....-.|+.|++||+++... .+ -+|.|+-
T Consensus 30 ~~~ELS~~kGd~vevle~~~~~p-eW~lvr~ 59 (82)
T 1u3o_A 30 HSSELSIQVGQTVELLERPSERP-GWCLVRT 59 (82)
T ss_dssp STTCCCBCTTCEEEESSCTTSST-TEEEEEE
T ss_pred CCCeeeEcCCCEEEEEecCCCCC-CEEEEEE
Confidence 34455699999999999763 13 3666654
No 74
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=39.71 E-value=79 Score=20.78 Aligned_cols=41 Identities=20% Similarity=0.170 Sum_probs=33.0
Q ss_pred CCCCCcccEEEeecCCCCCccEEEEEEEeeeC--CeEEEEecCCC
Q psy15287 99 PSVFKIGRKLEAIDKKGGSNLFHVATVRDVIG--TRLHIHIDSAG 141 (186)
Q Consensus 99 ~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g--~~l~v~~dg~~ 141 (186)
...+++|+.+-|.=..+ ..++-|+|++|.+ ..+.|.|.+++
T Consensus 15 ~~~~kvGd~C~A~ys~D--g~wYRA~I~~i~~~~~~~~V~fvDYG 57 (77)
T 3pnw_C 15 AKMWKPGDECFALYWED--NKFYRAEVEALHSSGMTAVVKFIDYG 57 (77)
T ss_dssp HTTCCTTCEEEEEETTT--TEEEEEEEEEECTTSSEEEEEETTTC
T ss_pred cCCCCcCCEEEEEECCC--CCEEEEEEEEEeCCCCEEEEEEEcCC
Confidence 45689999999986444 2799999999974 57999999884
No 75
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=39.24 E-value=13 Score=26.91 Aligned_cols=19 Identities=26% Similarity=0.749 Sum_probs=16.7
Q ss_pred eEEEEcCCCCCCcEEEeCC
Q psy15287 3 IRLHFDGYPDRFDFWVNCN 21 (186)
Q Consensus 3 ~~lhfdG~~~~~dfW~~~~ 21 (186)
-+|||.||....|=|+..+
T Consensus 61 Y~VHY~GWn~~WDEWV~~d 79 (110)
T 3oa6_A 61 YLIHFNGWNRSWDRWAAED 79 (110)
T ss_dssp EEEEETTSCGGGCEEEEGG
T ss_pred EEEEECCcCcchhhccChh
Confidence 5899999999999999654
No 76
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=35.16 E-value=94 Score=20.35 Aligned_cols=57 Identities=16% Similarity=0.142 Sum_probs=42.6
Q ss_pred CCCCCCCCCcccEEEeecCCCCCccEEEEEEEeee--CCeEEEEecCCCCCCCCCeEEeCCCCCeeee
Q psy15287 95 SHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVI--GTRLHIHIDSAGSSDRMDYWTDIGSAYIRPV 160 (186)
Q Consensus 95 ~~~~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~--g~~l~v~~dg~~~d~~~d~W~d~~S~~I~Pv 160 (186)
+.++...|++|..+=|.=+ . ..++++|.|+.+. .+.-.|.|-. +--.++..-+|.|+
T Consensus 6 ~~mp~~~f~vgd~VmaRW~-G-d~~yYparItSits~~~~Y~VkfKd-------gT~e~L~~kDIKp~ 64 (68)
T 2dig_A 6 SGMPSRKFADGEVVRGRWP-G-SSLYYEVEILSHDSTSQLYTVKYKD-------GTELELKENDIKSG 64 (68)
T ss_dssp CSSCCCSSCSSCEEEEECT-T-TCCEEEEEEEEEETTTTEEEEECTT-------SCEEEEETTTEECC
T ss_pred CCCCceEeecCCEEEEEcc-C-CccceEEEEEEeccCCceEEEEecC-------CCEEEechhccccC
Confidence 4678899999999999888 4 7899999999998 4457788741 22345566666665
No 77
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=35.03 E-value=27 Score=24.33 Aligned_cols=21 Identities=29% Similarity=0.589 Sum_probs=17.9
Q ss_pred ceEEEEcCCCCCCcEEEeCCC
Q psy15287 2 RIRLHFDGYPDRFDFWVNCNH 22 (186)
Q Consensus 2 r~~lhfdG~~~~~dfW~~~~S 22 (186)
...|||.||....|=|+..+.
T Consensus 49 ~YYVHY~g~NkRlDEWV~~~R 69 (92)
T 2bud_A 49 EYYVHYVGLNRRLDGWVGRHR 69 (92)
T ss_dssp EEEEECSSSCTTTCEEEETTT
T ss_pred EEEEEeCCcccccccccCHHH
Confidence 467999999999999997754
No 78
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=34.82 E-value=66 Score=25.88 Aligned_cols=37 Identities=11% Similarity=0.116 Sum_probs=31.1
Q ss_pred CCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEec
Q psy15287 99 PSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHID 138 (186)
Q Consensus 99 ~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~d 138 (186)
--+.++|.++++.|-.. ..+.|+|+++....+.+...
T Consensus 31 VLR~~~Gd~v~l~dg~g---~~~~a~I~~i~~~~~~~~i~ 67 (251)
T 4e8b_A 31 VLRMGPGQALQLFDGSN---QVFDAEITSASKKSVEVKVL 67 (251)
T ss_dssp TSCCCSCCEEEEECSSS---EEEEEEEEEECSSCEEEEEE
T ss_pred hCcCCCCCEEEEEeCCC---cEEEEEEEEeecceEEEEEe
Confidence 45678999999999877 78999999999887776653
No 79
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=34.45 E-value=17 Score=26.26 Aligned_cols=18 Identities=28% Similarity=0.750 Sum_probs=15.7
Q ss_pred eEEEEcCCCCCCcEEEeC
Q psy15287 3 IRLHFDGYPDRFDFWVNC 20 (186)
Q Consensus 3 ~~lhfdG~~~~~dfW~~~ 20 (186)
-+|||.||....|=|+..
T Consensus 61 Y~VHY~GWn~~wDEWV~e 78 (110)
T 3m9p_A 61 YLIHFNGWNRSWDRWAAE 78 (110)
T ss_dssp EEEEETTSCGGGCEEEEG
T ss_pred EEEEECCCCcchhhccCH
Confidence 589999999999999953
No 80
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=31.06 E-value=75 Score=25.72 Aligned_cols=37 Identities=16% Similarity=0.209 Sum_probs=31.1
Q ss_pred CCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEec
Q psy15287 99 PSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHID 138 (186)
Q Consensus 99 ~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~d 138 (186)
--+.++|.++++.|-.. ..+.|+|+++....+.+...
T Consensus 30 VLRl~~Gd~v~l~dg~g---~~~~a~I~~i~~~~~~~~i~ 66 (257)
T 3kw2_A 30 VLRMQAGDRLRLTDGRG---SFFDAVIETADRKSCYVSVC 66 (257)
T ss_dssp TSCCCTTCEEEEECSBS---EEEEEEEEEECSSCEEEEEE
T ss_pred hccCCCCCEEEEEECCC---CEEEEEEEEeeCCEEEEEEE
Confidence 45688999999999887 78999999999887777654
No 81
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=29.82 E-value=94 Score=25.23 Aligned_cols=39 Identities=8% Similarity=0.097 Sum_probs=32.2
Q ss_pred CCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecC
Q psy15287 98 PPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDS 139 (186)
Q Consensus 98 ~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg 139 (186)
.--+.++|..+++.|-.. ..+.|+|+++....+.+....
T Consensus 33 ~VLRl~~Gd~i~l~dg~G---~~~~a~I~~~~~~~~~~~i~~ 71 (268)
T 1vhk_A 33 NVMRMNEGDQIICCSQDG---FEAKCELQSVSKDKVSCLVIE 71 (268)
T ss_dssp TTTCCCTTCEEEEECTTS---CEEEEEEEEECSSEEEEEEEE
T ss_pred HhhcCCCCCEEEEEeCCC---CEEEEEEEEecCCEEEEEEEE
Confidence 356689999999999777 799999999998887776643
No 82
>1ixd_A Cylindromatosis tumour-suppressor CYLD; structural genomics, riken structural genomics/proteomics initiative, RSGI, antitumor protein; NMR {Homo sapiens} SCOP: b.34.10.1
Probab=28.48 E-value=1.2e+02 Score=21.35 Aligned_cols=40 Identities=5% Similarity=-0.022 Sum_probs=26.2
Q ss_pred CCCCCCCcccEEEeecC--CCCCccEEEEEEEeeeCCeEEEEe
Q psy15287 97 MPPSVFKIGRKLEAIDK--KGGSNLFHVATVRDVIGTRLHIHI 137 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~--~~~~~~i~vAtV~~v~g~~l~v~~ 137 (186)
.....|++|+++|+.+. +. -.+-+|..|.-..|..+=|.+
T Consensus 13 ~~~~~l~VG~RV~V~~~~~~~-GtVryvG~v~~~~G~wvGVEl 54 (104)
T 1ixd_A 13 GNSHGLEVGSLAEVKENPPFY-GVIRWIGQPPGLNEVLAGLEL 54 (104)
T ss_dssp TSSSCCCTTSEEEECSSSCCC-EEEEEEECCSSSCCCEEEEEE
T ss_pred CCCcccccCCEEEECcCCCcE-EEEEEecccCCCCceEEEEEe
Confidence 44677999999999753 22 223445555555577777778
No 83
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research CEN structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=28.12 E-value=98 Score=24.95 Aligned_cols=39 Identities=15% Similarity=0.126 Sum_probs=32.6
Q ss_pred CCCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecC
Q psy15287 98 PPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDS 139 (186)
Q Consensus 98 ~~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg 139 (186)
.--+.++|..+++.|-.. ..+.|+|+++....+.+....
T Consensus 32 ~VLRl~~Gd~v~l~dg~g---~~~~a~I~~~~~~~~~~~i~~ 70 (257)
T 1vhy_A 32 RVLRMTEGEQLELFDGSN---HIYPAKIIESNKKSVKVEILG 70 (257)
T ss_dssp TTSCCCTTCEEEEECSSS---EEEEEEEEEECSSCEEEEECC
T ss_pred HHhccCCCCEEEEEcCCC---CEEEEEEEEeeCCeEEEEEEE
Confidence 356689999999998877 799999999998888777753
No 84
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=27.59 E-value=93 Score=20.42 Aligned_cols=19 Identities=16% Similarity=0.184 Sum_probs=15.5
Q ss_pred CCCCCCCcccEEEeecCCC
Q psy15287 97 MPPSVFKIGRKLEAIDKKG 115 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~ 115 (186)
...-.|+.|..|+++...+
T Consensus 31 ~~eLsf~~Gd~i~Vl~~~~ 49 (83)
T 1neg_A 31 PREVTMKKGDILTLLNSTN 49 (83)
T ss_dssp TTBCCBCTTCEEEEEECCS
T ss_pred CCccccCCCCEEEEEEecC
Confidence 4556699999999999876
No 85
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=27.24 E-value=25 Score=26.31 Aligned_cols=20 Identities=25% Similarity=0.782 Sum_probs=17.3
Q ss_pred ceEEEEcCCCCCCcEEEeCC
Q psy15287 2 RIRLHFDGYPDRFDFWVNCN 21 (186)
Q Consensus 2 r~~lhfdG~~~~~dfW~~~~ 21 (186)
.-+|||.||....|-|+..+
T Consensus 78 ~Y~VHY~GWn~rwDEWV~~d 97 (136)
T 2k3y_A 78 SFFIHYQGWKSSWDEWVGYD 97 (136)
T ss_dssp EEEECCTTSCGGGCEEEETT
T ss_pred eEEEEeCCcCCcceeeecHh
Confidence 56899999999999999764
No 86
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=25.92 E-value=1.1e+02 Score=24.48 Aligned_cols=37 Identities=19% Similarity=0.189 Sum_probs=30.8
Q ss_pred CCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEec
Q psy15287 99 PSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHID 138 (186)
Q Consensus 99 ~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~d 138 (186)
--+.++|..+++.|-.. ..+.|+|+++....+.+...
T Consensus 38 VLRl~~Gd~v~l~dg~G---~~~~a~I~~~~~~~~~~~i~ 74 (234)
T 1z85_A 38 VVRLKEGDVIEATDGNG---FSYTCILKSLKKKTAAAKIV 74 (234)
T ss_dssp HTTCCTTCEEEEECSBS---EEEEEEEEEECSSCEEEEEE
T ss_pred hhcCCCCCEEEEEeCCC---CEEEEEEEEecCCEEEEEEE
Confidence 45678999999998877 79999999999887766654
No 87
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=25.55 E-value=1.6e+02 Score=22.79 Aligned_cols=40 Identities=10% Similarity=0.135 Sum_probs=33.7
Q ss_pred CCCCCcccEEEeecCCCCCccEEEEEEEeeeC---CeEEEEecCC
Q psy15287 99 PSVFKIGRKLEAIDKKGGSNLFHVATVRDVIG---TRLHIHIDSA 140 (186)
Q Consensus 99 ~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g---~~l~v~~dg~ 140 (186)
...|..|.+|=|+=+.. . .++.|+|..... +..+|.|||-
T Consensus 114 ~~~f~~G~~VLAlYP~T-T-~FY~A~V~~~p~~~~~~y~L~FEdd 156 (180)
T 3mea_A 114 EALFQKEQLVLALYPQT-T-CFYRALIHAPPQRPQDDYSVLFEDT 156 (180)
T ss_dssp GGSCCTTCEEEEECTTS-S-EEEEEEEEECCSSTTCCEEEEEBCT
T ss_pred cccCCCCCEEEEeCCCC-c-eeeEEEEecCCCCCCCcEEEEEcCC
Confidence 45699999999999987 4 799999999864 4699999975
No 88
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.12 E-value=1.2e+02 Score=18.82 Aligned_cols=19 Identities=16% Similarity=0.261 Sum_probs=15.5
Q ss_pred CCCCCCCcccEEEeecCCC
Q psy15287 97 MPPSVFKIGRKLEAIDKKG 115 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~ 115 (186)
...-.|+.|..|+++...+
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~ 39 (73)
T 2dm1_A 21 MRELSLREGDVVRIYSRIG 39 (73)
T ss_dssp TTBCCBCTTCEEECCBSSS
T ss_pred CCcCCCCCCCEEEEEEecC
Confidence 4566799999999998875
No 89
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=25.02 E-value=70 Score=23.94 Aligned_cols=29 Identities=10% Similarity=0.125 Sum_probs=23.2
Q ss_pred CCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEec
Q psy15287 102 FKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHID 138 (186)
Q Consensus 102 F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~d 138 (186)
.++||.+++- . + .++|++|.+.++.|-|.
T Consensus 103 ~~~G~~~~~~---~-~----~~~V~~v~~~~V~vD~N 131 (157)
T 3pr9_A 103 PIKGLTITID---G-I----PGKIVSINSGRVLVDFN 131 (157)
T ss_dssp CCTTCEEEET---T-E----EEEEEEEETTEEEEECS
T ss_pred cCCCcEEEec---C-C----CeEEEEEcCCEEEEECC
Confidence 5789999983 2 2 47999999999988764
No 90
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=23.29 E-value=79 Score=19.34 Aligned_cols=19 Identities=11% Similarity=0.274 Sum_probs=14.8
Q ss_pred CCCCCCCcccEEEeecCCC
Q psy15287 97 MPPSVFKIGRKLEAIDKKG 115 (186)
Q Consensus 97 ~~~~~F~vGmkLEa~d~~~ 115 (186)
...-.|+.|..++++...+
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~ 38 (67)
T 2o9s_A 20 QVEMSFRKGERITLLRQVD 38 (67)
T ss_dssp TTBCCBCTTCEEEEEEECS
T ss_pred cCccCCCCCCEEEEEEecC
Confidence 4456689999999988655
No 91
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=22.37 E-value=51 Score=24.39 Aligned_cols=19 Identities=26% Similarity=0.749 Sum_probs=16.2
Q ss_pred ceEEEEcCCCCCCcEEEeC
Q psy15287 2 RIRLHFDGYPDRFDFWVNC 20 (186)
Q Consensus 2 r~~lhfdG~~~~~dfW~~~ 20 (186)
.-+|||.||....|=|+..
T Consensus 76 ~Y~VHY~GWn~~WDEWV~e 94 (130)
T 3e9g_A 76 CFFIHYQGWKSSWDEWVGY 94 (130)
T ss_dssp EEEEEETTSCGGGCEEEET
T ss_pred eEEEEeCCCCCChhhccCH
Confidence 4589999999999999955
No 92
>2egv_A UPF0088 protein AQ_165; RSME, methyltransferase, rRNA modification, PUA domain, M3U, SAM, structural genomics, NPPSFA; HET: SAM; 1.45A {Aquifex aeolicus} PDB: 2egw_A*
Probab=20.87 E-value=1.3e+02 Score=23.79 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=30.7
Q ss_pred CCCCCcccEEEeecCCCCCccEEEEEEEeeeCCeEEEEecC
Q psy15287 99 PSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDS 139 (186)
Q Consensus 99 ~~~F~vGmkLEa~d~~~~~~~i~vAtV~~v~g~~l~v~~dg 139 (186)
-.+.++|..+++ |-.. ..+.|+|+++....+.+....
T Consensus 26 VlRl~~Gd~v~l-dg~g---~~~~a~i~~~~~~~~~~~i~~ 62 (229)
T 2egv_A 26 VRRIEKDEEFGV-IHEG---KIYVCKVRREDKREISCEIVE 62 (229)
T ss_dssp HTTCCTTCCEEE-EETT---EEEEEEEEEECSSEEEEEEEE
T ss_pred hhcCCCCCEEEE-eCCC---CEEEEEEEEecCCEEEEEEEE
Confidence 356789999999 8776 799999999998888777653
Done!