RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15287
(186 letters)
>d1oz2a1 b.34.9.3 (A:204-313) Lethal(3)malignant brain tumor-like
protein {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 100 bits (251), Expect = 1e-28
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 20/121 (16%)
Query: 53 FSWGKYLHVTKSMAAPPHCFTSSHSSKYCACATQPGSHCFTSSHMPPSVFKIGRKLEAID 112
+SW YL K++ AP F S + + FK+G KLE ID
Sbjct: 3 WSWESYLEEQKAITAPVSLFQDSQAVT-----------------HNKNGFKLGMKLEGID 45
Query: 113 KKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPVGWCRRNKVKLVP 172
+ +++ + TV +V G RL +H D G S+ D+W + S I P GW + KL P
Sbjct: 46 PQH-PSMYFILTVAEVCGYRLRLHFD--GYSECHDFWVNANSPDIHPAGWFEKTGHKLQP 102
Query: 173 P 173
P
Sbjct: 103 P 103
Score = 51.8 bits (124), Expect = 9e-10
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 2 RIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPP 41
R+RLHFDGY + DFWVN N PD++P GW ++ PP
Sbjct: 64 RLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQPP 103
>d1oz2a3 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumor-like
protein {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 98.0 bits (244), Expect = 1e-27
Identities = 40/121 (33%), Positives = 49/121 (40%), Gaps = 25/121 (20%)
Query: 53 FSWGKYLHVTKSMAAPPHCFTSSHSSKYCACATQPGSHCFTSSHMPPSVFKIGRKLEAID 112
F W KYL T + A P F PP F + KLEA+D
Sbjct: 1 FCWEKYLEETGASAVPTWAFK----------------------VRPPHSFLVNMKLEAVD 38
Query: 113 KKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPVGWCRRNKVKLVP 172
++ L VA+V DV R+ IH D G S D+W D I P GWC + L P
Sbjct: 39 RRN-PALIRVASVEDVEDHRIKIHFD--GWSHGYDFWIDADHPDIHPAGWCSKTGHPLQP 95
Query: 173 P 173
P
Sbjct: 96 P 96
Score = 51.4 bits (123), Expect = 1e-09
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 2 RIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPP 41
RI++HFDG+ +DFW++ +HPD++P GW + + PP
Sbjct: 57 RIKIHFDGWSHGYDFWIDADHPDIHPAGWCSKTGHPLQPP 96
>d1oi1a1 b.34.9.3 (A:33-135) Scml2 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 96.1 bits (239), Expect = 6e-27
Identities = 41/121 (33%), Positives = 57/121 (47%), Gaps = 22/121 (18%)
Query: 53 FSWGKYLHVTKSMAAPPHCFTSSHSSKYCACATQPGSHCFTSSHMPPSVFKIGRKLEAID 112
F W +YL T S++AP CF S P + FK+G KLEA D
Sbjct: 1 FHWEEYLKETGSISAPSECFRQSQIP-------------------PVNDFKVGMKLEARD 41
Query: 113 KKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPVGWCRRNKVKLVP 172
+ + +ATV + G RL + +D GS +R D+W + S I+PVG C + L P
Sbjct: 42 PRN-ATSVCIATVIGITGARLRLRLD--GSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQP 98
Query: 173 P 173
P
Sbjct: 99 P 99
Score = 50.2 bits (120), Expect = 3e-09
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 2 RIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPP 41
R+RL DG +R DFW + PD+ P G + PP
Sbjct: 60 RLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQPP 99
>d1oz2a2 b.34.9.3 (A:314-421) Lethal(3)malignant brain tumor-like
protein {Human (Homo sapiens) [TaxId: 9606]}
Length = 108
Score = 95.0 bits (236), Expect = 2e-26
Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 21/121 (17%)
Query: 53 FSWGKYLHVTKSMAAPPHCFTSSHSSKYCACATQPGSHCFTSSHMPPSVFKIGRKLEAID 112
FSW +YL T++ AAP H F S S PP F++G KLEA+D
Sbjct: 1 FSWSQYLRSTRAQAAPKHLFVS------------------QSHSPPPLGFQVGMKLEAVD 42
Query: 113 KKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPVGWCRRNKVKLVP 172
+ +L VA+V DV+ +R +H D D DYW D S YI PVGWC++ L P
Sbjct: 43 RMN-PSLVCVASVTDVVDSRFLVHFD--NWDDTYDYWCDPSSPYIHPVGWCQKQGKPLTP 99
Query: 173 P 173
P
Sbjct: 100 P 100
Score = 50.7 bits (121), Expect = 2e-09
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 2 RIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRN 49
R +HFD + D +D+W + + P ++P GW + + PP P+ N
Sbjct: 61 RFLVHFDNWDDTYDYWCDPSSPYIHPVGWCQKQGKPLTPPQDYPDPDN 108
>d1oi1a2 b.34.9.3 (A:140-243) Scml2 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 91.5 bits (227), Expect = 5e-25
Identities = 42/124 (33%), Positives = 49/124 (39%), Gaps = 23/124 (18%)
Query: 54 SWGKYL--HVTKSMAAPPHCFTSSHSSKYCACATQPGSHCFTSSHMPPSVFKIGRKLEAI 111
SW +L + S A F P + FK+G KLEAI
Sbjct: 1 SWPMFLLETLNGSEMASATLFKK------------------EPPKPPLNNFKVGMKLEAI 42
Query: 112 DKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPVGWCRRNKVKLV 171
DKK L AT+ DV G +HI D G S DYW S I P GWCR L
Sbjct: 43 DKKN-PYLICPATIGDVKGDEVHITFD--GWSGAFDYWCKYDSRDIFPAGWCRLTGDVLQ 99
Query: 172 PPAS 175
PP +
Sbjct: 100 PPGT 103
Score = 51.8 bits (124), Expect = 8e-10
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 2 RIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPPAST 44
+ + FDG+ FD+W + D++P GW + PP ++
Sbjct: 62 EVHITFDGWSGAFDYWCKYDSRDIFPAGWCRLTGDVLQPPGTS 104
>d1wjra_ b.34.9.3 (A:) Scm-like with four MBT domains protein 2,
SFMBT2 (KIAA1617) {Human (Homo sapiens) [TaxId: 9606]}
Length = 127
Score = 85.0 bits (210), Expect = 3e-22
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 93 TSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDI 152
+ S P + +G +E D + + + +V + +G RL + ++ D W
Sbjct: 3 SGSSGPIDLITVGSLIELQDSQNPF-QYWIVSVIENVGGRLRLRYVGLEDTESYDQWLFY 61
Query: 153 GSAYIRPVGWCRRNKVKLVPP 173
+RPVGWC+ NK ++ PP
Sbjct: 62 LDYRLRPVGWCQENKYRMDPP 82
Score = 62.2 bits (151), Expect = 2e-13
Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 8/77 (10%)
Query: 2 RIRLHFDGYPD--RFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYL 59
R+RL + G D +D W+ L P GW R+ PP+ ++ W L
Sbjct: 41 RLRLRYVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMDPPSEIYPLKMA--SEWKCTL 98
Query: 60 HVTKSMA----APPHCF 72
+ A P F
Sbjct: 99 EKSLIDAAKFPLPMEVF 115
>d1wjqa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3
protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 107
Score = 80.7 bits (199), Expect = 6e-21
Identities = 33/82 (40%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 94 SSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIG 153
S PP F+ KLE +DK+ VATV D R+ +H D G ++ DYW D
Sbjct: 6 SGVKPPHGFQKKMKLEVVDKRNPM-FIRVATVADTDDHRVKVHFD--GWNNCYDYWIDAD 62
Query: 154 SAYIRPVGWCRRNKVKLVPPAS 175
S I PVGWC + L PP S
Sbjct: 63 SPDIHPVGWCSKTGHPLQPPLS 84
Score = 51.8 bits (124), Expect = 9e-10
Identities = 15/50 (30%), Positives = 31/50 (62%)
Query: 2 RIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTA 51
R+++HFDG+ + +D+W++ + PD++P GW + + PP S + +
Sbjct: 43 RVKVHFDGWNNCYDYWIDADSPDIHPVGWCSKTGHPLQPPLSPLELMEAS 92
>d1wjsa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3
protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 127
Score = 79.9 bits (197), Expect = 2e-20
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 93 TSSHMPPSVFKIGRKLEAIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDI 152
+S + FK+G KLE +D + +++ V TV +V G R+ +H D G SD D+W +
Sbjct: 5 SSGPYNKNGFKVGMKLEGVDPEH-QSVYCVLTVAEVCGYRIKLHFD--GYSDCYDFWVNA 61
Query: 153 GSAYIRPVGWCRRNKVKLVPPA 174
+ I PVGWC + KL PP
Sbjct: 62 DALDIHPVGWCEKTGHKLHPPK 83
Score = 68.0 bits (166), Expect = 1e-15
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 2 RIRLHFDGYPDRFDFWVNCNHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGKYLHV 61
RI+LHFDGY D +DFWVN + D++P GW +++PP F+W YL
Sbjct: 43 RIKLHFDGYSDCYDFWVNADALDIHPVGWCEKTGHKLHPPKGYKEEE----FNWQTYLKT 98
Query: 62 TKSMAAPPHCFTSSHSSKYCACATQPGS 89
K+ AAP F + + + + + P S
Sbjct: 99 CKAQAAPKSLFENQNITVIPSGFSGPSS 126
>d2ajfa1 d.92.1.5 (A:19-615) Angiotensin converting enzyme 2, ACE2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 597
Score = 28.6 bits (63), Expect = 0.44
Identities = 15/114 (13%), Positives = 30/114 (26%), Gaps = 15/114 (13%)
Query: 12 DRFDFWVNCNHPDLYPCGWNANF--HRRIYPPASTPNMRNTAWFSWGKYLHVTKSMAAPP 69
+++ + V ++ W + +R P + + HV S
Sbjct: 439 EKWRWMVF--KGEIPKDQWMKKWWEMKREIVGVVEPVPHDETYCDPASLFHV--SNDYSF 494
Query: 70 HCFTSSHS------SKYCACATQPGSHCFTSSHMPPSVFKIGRKLEAIDKKGGS 117
+ + C A G G+KL + + G S
Sbjct: 495 IRYYTRTLYQFQFQEALCQAAKHEGPLHKCDISNSTEA---GQKLFNMLRLGKS 545
>d2i9ca1 a.118.1.25 (A:3-123) Hypothetical protein RPA1889
{Rhodopseudomonas palustris [TaxId: 1076]}
Length = 121
Score = 25.6 bits (56), Expect = 2.3
Identities = 4/37 (10%), Positives = 10/37 (27%)
Query: 21 NHPDLYPCGWNANFHRRIYPPASTPNMRNTAWFSWGK 57
+P++ A + P + + W
Sbjct: 65 EYPNMQVRLQAAKLTLAVAPVKAREQLEAIVSSKWFP 101
>d1wgsa_ b.34.13.3 (A:) Probable histone acetyltransferase MYST1
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 133
Score = 25.3 bits (55), Expect = 2.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 6 HFDGYPDRFDFWVNCNHPDLYP 27
H+ G+ R D WV+ N L
Sbjct: 50 HYVGFNRRLDEWVDKNRLALTK 71
>d1irue_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 234
Score = 25.4 bits (55), Expect = 5.0
Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 110 AIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYIRPVGWCRRNKVK 169
A++K+ S L +++ ++ HI +G D +
Sbjct: 42 AVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQN--HWFTYNET 99
Query: 170 LVPPASGKRVSPLFF 184
+ + + VS L
Sbjct: 100 MTVESVTQAVSNLAL 114
>d1j2pa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 243
Score = 24.6 bits (53), Expect = 6.9
Identities = 10/48 (20%), Positives = 15/48 (31%)
Query: 110 AIDKKGGSNLFHVATVRDVIGTRLHIHIDSAGSSDRMDYWTDIGSAYI 157
DK+ GS L T+ + HI ++G D
Sbjct: 46 IADKRVGSKLLEKDTIEKIYKIDEHICAATSGLVADARVLIDRARIEA 93
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.138 0.481
Gapped
Lambda K H
0.267 0.0619 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 805,736
Number of extensions: 36087
Number of successful extensions: 181
Number of sequences better than 10.0: 1
Number of HSP's gapped: 158
Number of HSP's successfully gapped: 37
Length of query: 186
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 106
Effective length of database: 1,309,196
Effective search space: 138774776
Effective search space used: 138774776
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.3 bits)