Query psy1529
Match_columns 175
No_of_seqs 116 out of 788
Neff 7.6
Searched_HMMs 13730
Date Fri Aug 16 17:18:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1529.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1529hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1o5za1 c.59.1.2 (A:294-430) F 27.6 33 0.0024 21.7 4.0 52 2-54 20-71 (137)
2 d2r8oa2 c.36.1.10 (A:2-332) Tr 18.8 36 0.0026 25.7 3.0 40 17-58 204-248 (331)
3 d1yara1 d.153.1.4 (A:13-233) P 13.9 82 0.006 21.5 3.8 36 31-66 6-42 (221)
4 d1iruf_ d.153.1.4 (F:) Proteas 13.4 52 0.0038 23.1 2.5 36 30-65 12-48 (238)
5 d1irua_ d.153.1.4 (A:) Proteas 13.1 66 0.0048 22.6 3.1 55 31-97 18-74 (244)
6 d1rypc_ d.153.1.4 (C:) Proteas 12.8 93 0.0068 21.6 3.9 38 30-67 14-52 (244)
7 d1k12a_ b.18.1.15 (A:) Fucose 12.1 59 0.0043 20.7 2.4 13 162-174 140-152 (158)
8 d1r7ha_ c.47.1.1 (A:) Glutared 11.1 1.1E+02 0.0083 16.6 3.2 31 34-68 38-69 (74)
9 d1h8ba_ a.39.1.7 (A:) alpha-Ac 10.7 1.6E+02 0.011 17.0 4.5 38 1-45 33-70 (73)
10 d1irue_ d.153.1.4 (E:) Proteas 10.6 1.2E+02 0.0089 20.8 3.9 35 31-65 11-46 (234)
No 1
>d1o5za1 c.59.1.2 (A:294-430) Folylpolyglutamate synthetase, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=27.55 E-value=33 Score=21.65 Aligned_cols=52 Identities=10% Similarity=0.008 Sum_probs=32.0
Q ss_pred CHHHHHHHHHcCCccccCCCceEEEecccccccHHHHHHhhcCCCCEEEEEEc
Q psy1529 2 NPKKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKT 54 (175)
Q Consensus 2 ~~~~~~~L~~~lP~~~~~~~~~llyss~~hG~S~~~f~~~~~~~gptllvik~ 54 (175)
||+-++.|..++.......++.+++.... +.....+.+.+....-.++++..
T Consensus 20 N~~a~~~l~~~l~~~~~~~~~~~i~g~~~-dkd~~~~l~~l~~~~~~i~~~~~ 71 (137)
T d1o5za1 20 NPHGAESLVRSLKLYFNGEPLSLVIGILD-DKNREDILRKYTGIFERVIVTRV 71 (137)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEEEECCCT-TSCHHHHHGGGTTTCSEEEECCC
T ss_pred CHHHHHHHHHHHHhhhccccceeeecccc-cccHHHHHHHHHhhcceeeeeec
Confidence 66777776666665545566777776654 35566676666655444555443
No 2
>d2r8oa2 c.36.1.10 (A:2-332) Transketolase (TK), PP module {Escherichia coli [TaxId: 562]}
Probab=18.79 E-value=36 Score=25.70 Aligned_cols=40 Identities=20% Similarity=0.232 Sum_probs=27.3
Q ss_pred ccCCCceEEEecccccccHHHHHHh---hc--CCCCEEEEEEcCCCc
Q psy1529 17 ITMYQPVLLYTTEEHGCSLTTFYYR---VE--QHEPTLLMIKTTNNE 58 (175)
Q Consensus 17 ~~~~~~~llyss~~hG~S~~~f~~~---~~--~~gptllvik~~~g~ 58 (175)
++..-|..+- ..||..+..+.+. +. ...|++|+++|..|.
T Consensus 204 f~afGw~vi~--~~dghd~~~i~~A~~~a~~~~~kP~~Ii~~TikGk 248 (331)
T d2r8oa2 204 FEAYGWHVIR--DIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGF 248 (331)
T ss_dssp HHHTTCEEEE--EEETTCHHHHHHHHHHHHHCCSSCEEEEEECCTTT
T ss_pred HHHcCCeeec--ccccchHHHHHHHHHHHHhhcCCCccceeeeeeec
Confidence 4445687653 3688887776543 32 256999999998763
No 3
>d1yara1 d.153.1.4 (A:13-233) Proteasome alpha subunit (non-catalytic) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=13.93 E-value=82 Score=21.55 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=26.2
Q ss_pred ccccHH-HHHHhhcCCCCEEEEEEcCCCcEEEeeccC
Q psy1529 31 HGCSLT-TFYYRVEQHEPTLLMIKTTNNEVFGAYCST 66 (175)
Q Consensus 31 hG~S~~-~f~~~~~~~gptllvik~~~g~vfGay~~~ 66 (175)
||.=+| ..-.++-.+|.|++-|+.++|.|+++-...
T Consensus 6 ~G~l~QvEYa~~av~~G~t~vgi~~~dgVvlaad~r~ 42 (221)
T d1yara1 6 DGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKV 42 (221)
T ss_dssp TSCCHHHHHHHHHHTTSCCEEEEEETTEEEEEECCCC
T ss_pred CCcchHHHHHHHHHhcCCcEEEEEeCCEEEEEEeccc
Confidence 455444 233445578999999999999999998643
No 4
>d1iruf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=13.36 E-value=52 Score=23.09 Aligned_cols=36 Identities=11% Similarity=0.125 Sum_probs=26.7
Q ss_pred cccccHH-HHHHhhcCCCCEEEEEEcCCCcEEEeecc
Q psy1529 30 EHGCSLT-TFYYRVEQHEPTLLMIKTTNNEVFGAYCS 65 (175)
Q Consensus 30 ~hG~S~~-~f~~~~~~~gptllvik~~~g~vfGay~~ 65 (175)
-+|.=++ ..-.++-.+|.|++-|+.++|.|++|-..
T Consensus 12 p~Grl~QvEYA~kav~~G~t~vgik~~dgVvlaad~~ 48 (238)
T d1iruf_ 12 PQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKR 48 (238)
T ss_dssp TTSCCHHHHHHHHHHHHSCCEEEEECSSEEEEEEECC
T ss_pred CCCcchHHHHHHHHHhcCCCEEEEEeCCEEEEEEecc
Confidence 3555555 34555556799999999999999999754
No 5
>d1irua_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=13.11 E-value=66 Score=22.57 Aligned_cols=55 Identities=13% Similarity=0.145 Sum_probs=33.5
Q ss_pred ccccHHH-H-HHhhcCCCCEEEEEEcCCCcEEEeeccCCcccCCccccCCCCCceecCCCeeEEEEcCC
Q psy1529 31 HGCSLTT-F-YYRVEQHEPTLLMIKTTNNEVFGAYCSTKWGERNQKDERGNRTAYFGTGETFLFSLYPE 97 (175)
Q Consensus 31 hG~S~~~-f-~~~~~~~gptllvik~~~g~vfGay~~~~w~~~~~~~~~~~~~~~~G~~~~FLF~l~p~ 97 (175)
+|.=+|- . .+.+...|+|++-|+.++|.|+++-.... ......+...-+|.+.+.
T Consensus 18 ~Grl~QvEYA~kav~~gg~t~igIk~~dgVVlaad~r~~------------~~~~~~~~~~KI~~I~~~ 74 (244)
T d1irua_ 18 EGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVP------------DKLLDSSTVTHLFKITEN 74 (244)
T ss_dssp TSCCHHHHHHHHHHHTTCCEEEEEECSSEEEEEEECCCC------------CSSBCGGGCCSEEESSSS
T ss_pred CCeEhHHHHHHHHHHhCCccEEEEEcCCEEEEEEecccc------------cccccCCccceEEEecCC
Confidence 4444443 1 22344457899999999999999976532 112222233467877775
No 6
>d1rypc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=12.78 E-value=93 Score=21.64 Aligned_cols=38 Identities=16% Similarity=0.134 Sum_probs=28.4
Q ss_pred cccccHH-HHHHhhcCCCCEEEEEEcCCCcEEEeeccCC
Q psy1529 30 EHGCSLT-TFYYRVEQHEPTLLMIKTTNNEVFGAYCSTK 67 (175)
Q Consensus 30 ~hG~S~~-~f~~~~~~~gptllvik~~~g~vfGay~~~~ 67 (175)
-+|.=+| ..-.++-.+|.|+|-|+..+|.|++|-....
T Consensus 14 p~G~~~Qveya~~ai~~G~T~vgi~~~dgVvlaad~r~s 52 (244)
T d1rypc_ 14 PEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVT 52 (244)
T ss_dssp TTSCBHHHHHHHHHHTTSCCEEEEEETTEEEEEEECSSC
T ss_pred CCCcChHHHHHHHHHhcCCCEEEEEeCCEEEEEEeCCcc
Confidence 3565555 3445566789999999999999999977543
No 7
>d1k12a_ b.18.1.15 (A:) Fucose binding lectin {European eel (Anguilla anguilla) [TaxId: 7936]}
Probab=12.08 E-value=59 Score=20.70 Aligned_cols=13 Identities=15% Similarity=0.138 Sum_probs=10.3
Q ss_pred CCceEEeEEEEEe
Q psy1529 162 GGDFEIRVLEVYG 174 (175)
Q Consensus 162 ~~~F~i~~iEVw~ 174 (175)
...+.|.+||||+
T Consensus 140 ~~~lsl~EveVY~ 152 (158)
T d1k12a_ 140 SESLHLCEVEVNV 152 (158)
T ss_dssp SSCCCEEEEEEEE
T ss_pred CceEEEEEEEEec
Confidence 3456799999996
No 8
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=11.10 E-value=1.1e+02 Score=16.63 Aligned_cols=31 Identities=6% Similarity=0.238 Sum_probs=19.3
Q ss_pred cHHHHHHhhcCCC-CEEEEEEcCCCcEEEeeccCCc
Q psy1529 34 SLTTFYYRVEQHE-PTLLMIKTTNNEVFGAYCSTKW 68 (175)
Q Consensus 34 S~~~f~~~~~~~g-ptllvik~~~g~vfGay~~~~w 68 (175)
....+++....++ |++++ +|..+|+|.++.+
T Consensus 38 ~~~~~~~~~g~~tvP~i~i----~g~~igGf~~d~l 69 (74)
T d1r7ha_ 38 EARDYVMALGYVQAPVVEV----DGEHWSGFRPERI 69 (74)
T ss_dssp HHHHHHHHTTCBCCCEEEE----TTEEEESCCHHHH
T ss_pred HHHHHHHHhCCCCcCEEEE----CCEEEeCCCHhHH
Confidence 3445555544443 87765 6789999975543
No 9
>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.74 E-value=1.6e+02 Score=17.02 Aligned_cols=38 Identities=11% Similarity=0.115 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHcCCccccCCCceEEEecccccccHHHHHHhhcCC
Q psy1529 1 MNPKKLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQH 45 (175)
Q Consensus 1 ~~~~~~~~L~~~lP~~~~~~~~~llyss~~hG~S~~~f~~~~~~~ 45 (175)
|.|++++-+...+|+.. .+ ....+|+.+..|.+.+.+.
T Consensus 33 L~peqaeyc~~~M~~y~---~~----~~~~~ayDY~sF~~~l~ge 70 (73)
T d1h8ba_ 33 LPPDQAQYCIKRMPAYS---GP----GSVPGALDYAAFSSALYGE 70 (73)
T ss_dssp SCHHHHHHHHHHSCSCC---CS----SCCTTCBCHHHHHHHHTCC
T ss_pred cCHHHHHHHHHHCcccC---CC----CCCCCcccHHHHHHHHhcc
Confidence 67899999999999752 22 2467899999999887654
No 10
>d1irue_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=10.56 E-value=1.2e+02 Score=20.79 Aligned_cols=35 Identities=11% Similarity=0.094 Sum_probs=25.1
Q ss_pred ccccHH-HHHHhhcCCCCEEEEEEcCCCcEEEeecc
Q psy1529 31 HGCSLT-TFYYRVEQHEPTLLMIKTTNNEVFGAYCS 65 (175)
Q Consensus 31 hG~S~~-~f~~~~~~~gptllvik~~~g~vfGay~~ 65 (175)
+|.=+| ..-.++-.+|.|++-|+.++|.|+++-..
T Consensus 11 ~G~l~QvEYa~kav~~G~t~vgik~~dgVvlaad~~ 46 (234)
T d1irue_ 11 EGRLFQVEYDIEAIKLGSTAIGIQTSEGVCLAVEKR 46 (234)
T ss_dssp TSCBHHHHHHHHHHTTSCCEEEEEETTEEEEEEECC
T ss_pred CCcchHHHHHHHHHHcCCCEEEEEeCCEEEEEEecC
Confidence 444444 23344556899999999999999999653
Done!