RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15292
(132 letters)
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation,
pyroglutamation, eight-membered R peptide bond,
hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Length = 238
Score = 84.2 bits (209), Expect = 3e-21
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
FV+ Y P+ NDV++IK + F ++ P+C PD V + + +GWG
Sbjct: 78 FVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGV 137
Query: 70 LSSAI 74
A+
Sbjct: 138 CCPAV 142
Score = 69.2 bits (170), Expect = 1e-15
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 75 PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
Y ++ NDV++IK + F ++ P+C PD V + + +GWG G
Sbjct: 81 ENYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGG 136
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate
immunity, melanin, immune system binding complex; HET:
NAG FUC; 2.00A {Holotrichia diomphalia}
Length = 394
Score = 85.3 bits (211), Expect = 7e-21
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
+H ++P NDVAL+ +D+ +V +I +CLP Q+ +GWG+ S
Sbjct: 218 IIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSR 277
Query: 70 LSSA 73
+
Sbjct: 278 HRYS 281
Score = 69.9 bits (171), Expect = 3e-15
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
++ NDVAL+ +D+ +V +I +CLP Q+ +GWG+
Sbjct: 227 TVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGS 276
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase,
innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila
melanogaster}
Length = 408
Score = 84.2 bits (208), Expect = 2e-20
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTR 65
+H +Y +D+AL+K+++ V F++HI P+CLP + + V GWG T
Sbjct: 210 LIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTE 269
Query: 66 HASS 69
+ SS
Sbjct: 270 NGSS 273
Score = 67.6 bits (165), Expect = 2e-14
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRH 126
I +D+AL+K+++ V F++HI P+CLP + + V GWG T +
Sbjct: 219 HIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTEN 270
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating
factor-I, PPAF-I, serine proteas hydrolase; HET: NAG;
1.70A {Holotrichia diomphalia}
Length = 278
Score = 81.6 bits (202), Expect = 5e-20
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 10 FVHPQYSPS--DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 66
HP Y D +D+ALI++++ V F +I PVCLP ++ VG+ TV GWGRT
Sbjct: 118 IQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTET 177
Query: 67 ASS 69
Sbjct: 178 GQY 180
Score = 68.9 bits (169), Expect = 3e-15
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 75 PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
+D+ALI++++ V F +I PVCLP ++ VG+ TV GWGRT
Sbjct: 125 DGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTET 177
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate
conformations, alternative splicing, glycoprotein,
hydrolase, protease, secreted; HET: K7J; 1.00A {Homo
sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Length = 224
Score = 78.0 bits (193), Expect = 7e-19
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
+SF HP YS ND+ L+K++ + V LP + G + TV+GWG T
Sbjct: 67 SKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSRCEP-PGTTCTVSGWGTTTS 125
Query: 67 ASSLSSAIPTYVS---ISNDV 84
+ V IS
Sbjct: 126 PDVTFPSDLMCVDVKLISPQD 146
Score = 59.5 bits (145), Expect = 6e-12
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 77 YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
+ ND+ L+K++ + V LP + G + TV+GWG T
Sbjct: 77 TQTHVNDLMLVKLNSQARLSSMVKKVRLPSRCEP-PGTTCTVSGWGTTTSPD 127
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B*
1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B
1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Length = 131
Score = 74.1 bits (183), Expect = 2e-18
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRH 66
F + +Y+ ND+ L+K+ F Q + VCLP + G + GWG TR+
Sbjct: 74 FKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRY 131
Score = 59.9 bits (146), Expect = 9e-13
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 75 PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRH 126
Y ++I+ND+ L+K+ F Q + VCLP + G + GWG TR+
Sbjct: 77 SKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRY 131
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase;
1.90A {Homo sapiens} PDB: 1ekb_B
Length = 235
Score = 76.5 bits (189), Expect = 2e-18
Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
++P Y+ ND+A++ ++ V + +I P+ LP++ G++ ++AGWG +
Sbjct: 79 VINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQG 138
Query: 69 SLSS 72
+ +
Sbjct: 139 TTAD 142
Score = 61.8 bits (151), Expect = 7e-13
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 75 PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
P Y ND+A++ ++ V + +I P+ LP++ G++ ++AGWG + G
Sbjct: 82 PHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQG 138
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS;
1.70A {Solenopsis invicta} SCOP: b.47.1.2
Length = 222
Score = 76.0 bits (188), Expect = 3e-18
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
V+ Y RNDVAL+ + + F + P+ L L T+ GWG TR +
Sbjct: 74 VVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGN 133
Query: 70 LSS 72
+
Sbjct: 134 TPN 136
Score = 63.3 bits (155), Expect = 2e-13
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
+ NDVAL+ + + F + P+ L L T+ GWG TR G
Sbjct: 83 LLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGG 132
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease,
inhibitor, complex, protease-substrate interactions,
collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Length = 226
Score = 75.6 bits (187), Expect = 4e-18
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG 62
+ + VH Y+ ND+A+I++ V I V LP V VG T GWG
Sbjct: 67 TIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDVG-VGTVVTPTGWG 125
Query: 63 RTRHASSLSSAIPTYVS---ISNDV 84
++ S + V +SN
Sbjct: 126 LPSDSALGISDVLRQVDVPIMSNAD 150
Score = 57.5 bits (140), Expect = 3e-11
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
ISND+A+I++ V I V LP V VG T GWG +
Sbjct: 84 ISNDIAVIRLPVPVTLTAAIATVGLPSTDVG-VGTVVTPTGWGLPSDSA 131
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation,
hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG;
2.30A {Homo sapiens} PDB: 2psy_A*
Length = 227
Score = 75.3 bits (186), Expect = 7e-18
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
+S HP YS ND+ LIK+++ + + + P+ + G V+GWG T+
Sbjct: 71 VKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSSHCPS-AGTKCLVSGWGTTKS 129
Query: 67 ASSLSSAIPTYVSI 80
+ ++I
Sbjct: 130 PQVHFPKVLQCLNI 143
Score = 57.9 bits (141), Expect = 2e-11
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 77 YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
+ SND+ LIK+++ + + + P+ + G V+GWG T+
Sbjct: 81 HPGHSNDLMLIKLNRRIRPTKDVRPINVSSHCPS-AGTKCLVSGWGTTKSPQ 131
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor;
mutagenically deglycosyalted human plasma kallikrein
protease domain; HET: BAM; 1.40A {Homo sapiens} PDB:
2anw_A*
Length = 241
Score = 75.3 bits (186), Expect = 7e-18
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
+H Y S+ +D+ALIK+ + + + P+ LP + + + V GWG ++
Sbjct: 80 IIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKG 139
Query: 69 SLSS 72
+ +
Sbjct: 140 EIQN 143
Score = 61.1 bits (149), Expect = 2e-12
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
Y ++D+ALIK+ + + + P+ LP + + + V GWG ++ G
Sbjct: 83 QNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKG 139
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine
esterase, glycosylation, extracellular; HET: NAG; 1.75A
{Agkistrodon halys}
Length = 238
Score = 74.9 bits (185), Expect = 1e-17
Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGW 61
++ + F + + + D+ LI++D V +HI P LP VG + GW
Sbjct: 67 TRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLPSSPPS-VGSVCRIMGW 125
Query: 62 GRTRHASSLSSAIPTYVS---ISNDV 84
GR +P V+ + ++
Sbjct: 126 GRISPTEGTYPDVPHCVNINLLEYEM 151
Score = 58.3 bits (142), Expect = 2e-11
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 76 TYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
Y D+ LI++D V +HI P LP VG + GWGR
Sbjct: 81 NYTLWDKDIMLIRLDSPVKNSKHIAPFSLPSSPPS-VGSVCRIMGWGRISPTE 132
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor
complex, serine proteinase, benzamidine phosphonate,
serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens}
PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A*
3p8g_A* 3p8f_A*
Length = 241
Score = 74.9 bits (185), Expect = 1e-17
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
HP ++ F D+AL++++K + + P+ LPD + GK+ V GWG T++
Sbjct: 84 ISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGG 143
Query: 69 SLSS 72
+ +
Sbjct: 144 TGAL 147
Score = 61.1 bits (149), Expect = 1e-12
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 75 PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
P + + D+AL++++K + + P+ LPD + GK+ V GWG T++ G
Sbjct: 87 PFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGG 143
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus}
PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A
1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A*
1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A
...
Length = 223
Score = 74.5 bits (184), Expect = 1e-17
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 8 QSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA 67
+S VHP Y+ + ND+ LIK+ + + LP G ++GWG T+ +
Sbjct: 69 KSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGNTKSS 127
Query: 68 SSLSSAIPTYVSI 80
+ + +
Sbjct: 128 GTSYPDVLKCLKA 140
Score = 57.5 bits (140), Expect = 3e-11
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 77 YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
+++ND+ LIK+ + + LP G ++GWG T+ +G
Sbjct: 78 SNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGNTKSSG 128
>1fxy_A Coagulation factor XA-trypsin chimera; protease,
chloromethylketone, hydrolase-hydrolase I complex; HET:
0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Length = 228
Score = 74.5 bits (184), Expect = 1e-17
Identities = 12/74 (16%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
H +++ + D+A++++ + F+ ++ P LP G ++GWG T
Sbjct: 72 EVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPA-TGTKCLISGWGNTAS 130
Query: 67 ASSLSSAIPTYVSI 80
+ + +
Sbjct: 131 SGADYPDELQCLDA 144
Score = 58.3 bits (142), Expect = 2e-11
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
+ D+A++++ + F+ ++ P LP G ++GWG T +G
Sbjct: 78 NRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPA-TGTKCLISGWGNTASSG 132
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 76.4 bits (188), Expect = 1e-17
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
+H QY ++ D+AL+K++ V + P+CLP + + + V GWG +
Sbjct: 467 IIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRD 526
Query: 69 SLSS 72
+ +
Sbjct: 527 KIQN 530
Score = 61.8 bits (150), Expect = 2e-12
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
Y D+AL+K++ V + P+CLP + + + V GWG +
Sbjct: 470 DQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDK 527
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex,
hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2
PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H
1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H*
1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H*
...
Length = 254
Score = 74.6 bits (184), Expect = 2e-17
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTR 65
+ Y P +D+AL+++ + VV H++P+CLP++T + + V+GWG+
Sbjct: 77 IIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLL 136
Query: 66 HASSLSS 72
+ +
Sbjct: 137 DRGATAL 143
Score = 61.9 bits (151), Expect = 1e-12
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHAG 128
TYV ++D+AL+++ + VV H++P+CLP++T + + V+GWG+ G
Sbjct: 80 STYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRG 139
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine
proteinases, trypsin-like serine protease, tumor marker,
hydrolase; 1.61A {Homo sapiens}
Length = 232
Score = 74.1 bits (183), Expect = 2e-17
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
VH +Y D++L ++ V + + VCLPD + + G V G+G ++
Sbjct: 73 IVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDG 132
Query: 69 SLSS 72
+
Sbjct: 133 YSQN 136
Score = 61.0 bits (149), Expect = 2e-12
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 77 YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
+ S D++L ++ V + + VCLPD + + G V G+G ++ G+
Sbjct: 80 HPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGY 133
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic
resolution, hydrolase/hydrolase inhibitor complex; 1.20A
{Pontastacus leptodactylus} SCOP: b.47.1.2
Length = 237
Score = 74.2 bits (183), Expect = 2e-17
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
+H + + ND++L+K+ + F ++ P+ LP+Q V GWG T +
Sbjct: 83 ILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHT-ATGDVIVTGWGTTSEGGN 141
Query: 70 LSS 72
Sbjct: 142 TPD 144
Score = 60.3 bits (147), Expect = 3e-12
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 77 YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
Y + ND++L+K+ + F ++ P+ LP+Q V GWG T G
Sbjct: 90 YNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHT-ATGDVIVTGWGTTSEGG 140
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase;
HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP:
b.47.1.2 PDB: 1fiz_A*
Length = 290
Score = 75.1 bits (185), Expect = 2e-17
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV--GKSATVAGWGRTRHA 67
+H +YS S ND+AL+KI V I P CLP ++ VAGWG +
Sbjct: 88 IIHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQEN 147
Query: 68 SSLSSAI 74
+ +S +
Sbjct: 148 ARRTSPM 154
Score = 60.1 bits (146), Expect = 5e-12
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 75 PTYVSIS--NDVALIKIDKDVVFKQHIIPVCLPDQTVKLV--GKSATVAGWGRTRHAG 128
Y + S ND+AL+KI V I P CLP ++ VAGWG +
Sbjct: 91 EKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENA 148
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA
inhibitor complex, covalent inhibitor, alternative
splicing, blood coagulation; HET: INH; 1.60A {Homo
sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A*
1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A*
1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A*
2fda_A* ...
Length = 238
Score = 74.2 bits (183), Expect = 2e-17
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
+H QY ++ D+AL+K++ V + P+ LP + + + V GWG +
Sbjct: 80 IIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRD 139
Query: 69 SLSS 72
+ +
Sbjct: 140 KIQN 143
Score = 60.3 bits (147), Expect = 3e-12
Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
Y D+AL+K++ V + P+ LP + + + V GWG +
Sbjct: 83 DQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDK 140
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation,
hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC;
1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A*
2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A*
3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Length = 245
Score = 74.2 bits (183), Expect = 2e-17
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
VHPQ+ D+AL+++++ V + V LP + G V GWG +
Sbjct: 78 IVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDE 137
Query: 69 SLSSA 73
L
Sbjct: 138 PLPPP 142
Score = 59.2 bits (144), Expect = 9e-12
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
P + D+AL+++++ V + V LP + G V GWG +
Sbjct: 81 PQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDE 137
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
SCOP: b.47.1.2
Length = 242
Score = 74.2 bits (183), Expect = 2e-17
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 7 RQSFVHPQYSPSD---FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWG 62
R+ VHP Y + F D+AL++++ V +++P+CLPD +G V+G+G
Sbjct: 75 RRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFG 134
Query: 63 RTRHASS 69
+
Sbjct: 135 VMEEKIA 141
Score = 62.3 bits (152), Expect = 7e-13
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
+ D+AL++++ V +++P+CLPD +G V+G+G
Sbjct: 90 NFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE 138
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 75.2 bits (185), Expect = 3e-17
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 10 FVHPQYSPSD---FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
VHP Y + F D+AL++++ V +++P+CLPD +G V+G+G
Sbjct: 235 SVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVME 294
Query: 66 HASS 69
+
Sbjct: 295 EKIA 298
Score = 62.5 bits (152), Expect = 1e-12
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 125
+ D+AL++++ V +++P+CLPD +G V+G+G
Sbjct: 247 NFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVME 294
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET:
NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB:
2aip_A*
Length = 231
Score = 73.3 bits (181), Expect = 4e-17
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
+ F + + + D+ LI++++ V HI P+ LP VG + GWG
Sbjct: 69 EKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPSNPPS-VGSVCRIMGWGTITS 127
Query: 67 ASSLSSAIP 75
++ +P
Sbjct: 128 PNATLPDVP 136
Score = 57.9 bits (141), Expect = 2e-11
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 77 YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
D+ LI++++ V HI P+ LP VG + GWG
Sbjct: 79 DTIWDKDIMLIRLNRPVRNSAHIAPLSLPSNPPS-VGSVCRIMGWGTITSPN 129
>1aut_C Activated protein C; serine proteinase, plasma calcium binding,
glycoprotein, HYD hydrolase inhibitor complex, blood
clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2
PDB: 3f6u_H*
Length = 250
Score = 73.4 bits (181), Expect = 4e-17
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-----VGKSATVAGW 61
++ FVHP YS S ND+AL+ + + Q I+P+CLPD + G+ V GW
Sbjct: 72 KEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGW 131
Query: 62 GRTRHASSLSSAIPTYV 78
G + T+V
Sbjct: 132 GYHSSREKEAKRNRTFV 148
Score = 59.6 bits (145), Expect = 6e-12
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-----VGKSATVAGWGRTRHA 127
P Y ND+AL+ + + Q I+P+CLPD + G+ V GWG
Sbjct: 78 PNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSR 137
Query: 128 GH 129
Sbjct: 138 EK 139
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6,
benzamidine, protease, brain serine protease,
myelencephalon specific protease, MSP, ZYME; 1.56A {Homo
sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Length = 223
Score = 73.0 bits (180), Expect = 5e-17
Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
++ +HP Y + D+ L+++ + + I P+ L S + GWG+T
Sbjct: 69 VRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCSA-NTTSCHILGWGKTAD 127
Score = 56.0 bits (136), Expect = 1e-10
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 126
S D+ L+++ + + I P+ L S + GWG+T
Sbjct: 81 SHDQDIMLLRLARPAKLSELIQPLPLERDCSA-NTTSCHILGWGKTAD 127
>1md8_A C1R complement serine protease; innate immunity, activation,
substrate specificity, hydrolase; 2.80A {Homo sapiens}
SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Length = 329
Score = 74.4 bits (183), Expect = 5e-17
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 7 RQSFVHPQYSPSD---FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWG 62
R+ VHP Y + F D+AL++++ V +++P+CLPD +G V+G+G
Sbjct: 164 RRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFG 223
Query: 63 RTRHASS 69
+
Sbjct: 224 VMEEKIA 230
Score = 62.1 bits (151), Expect = 1e-12
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 125
+ D+AL++++ V +++P+CLPD +G V+G+G
Sbjct: 179 NFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVME 226
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine
proteinase, C-terminal peptidase; 2.35A {Bos taurus}
SCOP: b.47.1.2
Length = 251
Score = 73.0 bits (180), Expect = 6e-17
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
FVH +++ RND+ALIK+ + V I CLP + L V GWGR
Sbjct: 92 FVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNG 151
Query: 69 SLSS 72
+++
Sbjct: 152 PIAA 155
Score = 58.4 bits (142), Expect = 2e-11
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
+ ND+ALIK+ + V I CLP + L V GWGR G
Sbjct: 101 LVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNG 151
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_B
Length = 251
Score = 73.1 bits (180), Expect = 6e-17
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
+HPQY P+ F NDVAL+++ + V ++P+CLP+ + G V+GWG+
Sbjct: 91 TLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQQ-EGAMVIVSGWGKQFLQRF 149
Score = 58.8 bits (143), Expect = 1e-11
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTR 125
P Y NDVAL+++ + V ++P+CLP+ + G V+GWG+
Sbjct: 94 PQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQQ-EGAMVIVSGWGKQF 145
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage,
salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar}
SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A
2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A
2eek_A
Length = 222
Score = 72.5 bits (179), Expect = 7e-17
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
+ HP YS + ND+ LIK+ K ++ PV LP G TV+GWG T
Sbjct: 68 SRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMS 126
Query: 67 ASSLSS 72
+++ S+
Sbjct: 127 STADSN 132
Score = 56.4 bits (137), Expect = 7e-11
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 77 YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
+I ND+ LIK+ K ++ PV LP G TV+GWG T +
Sbjct: 78 SYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMSST 128
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen,
secreted, protease, hydrolase, polymorphism,
glycoprotein, gamma-carboxyglutamic acid; HET: BI7;
1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A*
2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D
2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B*
1lqd_B* 1nfu_A* 1nfw_A* ...
Length = 241
Score = 72.6 bits (179), Expect = 7e-17
Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWG 62
H +++ + D+A++++ + F+ ++ P CLP++ + K+ V+G+G
Sbjct: 72 EVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFG 131
Query: 63 RTRHASSLSS 72
RT S+
Sbjct: 132 RTHEKGEQST 141
Score = 61.1 bits (149), Expect = 2e-12
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHAG 128
+ D+A++++ + F+ ++ P CLP++ + K+ V+G+GRT G
Sbjct: 78 NRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKG 137
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase;
2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Length = 240
Score = 72.6 bits (179), Expect = 7e-17
Identities = 14/66 (21%), Positives = 26/66 (39%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
++ + + ND+ L+K+ +H+ + + +T G V GWG T
Sbjct: 76 KKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDP 135
Query: 67 ASSLSS 72
S S
Sbjct: 136 DSLRPS 141
Score = 56.0 bits (136), Expect = 1e-10
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 75 PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
SND+ L+K+ +H+ + + +T G V GWG T
Sbjct: 82 SRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDS 137
>2bdy_A Thrombin; thrombin, complex structure, hydrolase,
hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo
sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E*
1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A*
1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A*
1zgi_A* 1zgv_A* 1zrb_A* ...
Length = 289
Score = 73.2 bits (180), Expect = 8e-17
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 7 RQSFVHPQYSPSD-FRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGW 61
+ ++HP+Y+ + D+AL+K+ K V F +I PVCLPD+ G V GW
Sbjct: 112 EKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGW 171
Query: 62 GRTRHASSLSSAIPT 76
G + + +
Sbjct: 172 GNLKETWTANVGKGQ 186
Score = 62.0 bits (151), Expect = 1e-12
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 75 PTY---VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHA 127
P Y ++ D+AL+K+ K V F +I PVCLPD+ G V GWG +
Sbjct: 118 PRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET 177
Query: 128 G 128
Sbjct: 178 W 178
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease
(elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Length = 241
Score = 72.7 bits (179), Expect = 8e-17
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 10 FVHPQYSPS--DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 66
+H Y + ND+A++ + + +I LP G + ++GWGRT
Sbjct: 78 TMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDG 137
Query: 67 ASSLSS 72
++L
Sbjct: 138 TNNLPD 143
Score = 60.0 bits (146), Expect = 4e-12
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 75 PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
S SND+A++ + + +I LP G + ++GWGRT
Sbjct: 85 AGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTN 139
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine
protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Length = 424
Score = 73.7 bits (181), Expect = 1e-16
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 7 RQSFVHPQYSPSD-FRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGW 61
+ ++HP+Y+ + D+AL+K+ K V F +I PVCLPD+ G V GW
Sbjct: 247 EKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGW 306
Query: 62 GRTRHASSLSSAIPT 76
G + + +
Sbjct: 307 GNLKETWTANVGKGQ 321
Score = 62.6 bits (152), Expect = 9e-13
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 75 PTY---VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHA 127
P Y ++ D+AL+K+ K V F +I PVCLPD+ G V GWG +
Sbjct: 253 PRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET 312
Query: 128 G 128
Sbjct: 313 W 313
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood
coagulation, BLOO clotting, convertion of fibrinogen to
fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB:
1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H*
1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H*
1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Length = 259
Score = 72.3 bits (178), Expect = 1e-16
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 7 RQSFVHPQYSPSD-FRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGW 61
+ ++HP+Y+ + D+AL+K+ K V F +I PVCLPD+ G V GW
Sbjct: 82 EKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGW 141
Query: 62 GRTRHASSLSSAIPT 76
G + + +
Sbjct: 142 GNLKETWTANVGKGQ 156
Score = 61.6 bits (150), Expect = 1e-12
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 75 PTY---VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHA 127
P Y ++ D+AL+K+ K V F +I PVCLPD+ G V GWG +
Sbjct: 88 PRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET 147
Query: 128 G 128
Sbjct: 148 W 148
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin
binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2
PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Length = 225
Score = 71.8 bits (177), Expect = 1e-16
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
S Y P ND+ L+++D++ + + LP Q + G VAGWG R
Sbjct: 73 ISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQR 132
Query: 66 HASSLSS 72
LS
Sbjct: 133 SGGRLSR 139
Score = 53.7 bits (130), Expect = 6e-10
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
ND+ L+++D++ + + LP Q + G VAGWG R G
Sbjct: 85 QNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGG 135
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double
six-stranded beta-barrels, hydrola glycosylation; HET:
NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB:
3s9b_A* 3s9a_A* 3sbk_A*
Length = 234
Score = 71.8 bits (177), Expect = 2e-16
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGW 61
++ + F P+ D+ LI++ + V + HI PV LP ++ VG + GW
Sbjct: 67 IRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSRSRG-VGSRCRIMGW 125
Query: 62 GRTRHASS 69
G+ +
Sbjct: 126 GKISTTTY 133
Score = 56.4 bits (137), Expect = 8e-11
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 124
+ D+ LI++ + V + HI PV LP ++ VG + GWG+
Sbjct: 84 GLDKDIMLIRLRRPVTYSTHIAPVSLPSRSRG-VGSRCRIMGWGKI 128
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 73.4 bits (180), Expect = 2e-16
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVF----KQHIIPVCLPDQTVKL-VGKSATVAGWGRT 64
H Y+ ++ND+ALI++ KD IP C+P + V+GWGR
Sbjct: 398 IFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGRE 457
Query: 65 RHASSLSS 72
+ + S
Sbjct: 458 KDNERVFS 465
Score = 57.2 bits (138), Expect = 8e-11
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 79 SISNDVALIKIDKDVVF----KQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
+ ND+ALI++ KD IP C+P + V+GWGR +
Sbjct: 407 TYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNE 461
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin
membrane, disulfide bond, glycoprotein, hydrolase,
membrane protease, secreted; 1.30A {Homo sapiens} PDB:
3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A
3dfl_A*
Length = 261
Score = 71.9 bits (177), Expect = 2e-16
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
HP Y + D+AL+++ + + F ++I P+ LP G TV GWG +
Sbjct: 77 IPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSV 136
Query: 69 SLSSA 73
SL +
Sbjct: 137 SLLTP 141
Score = 58.1 bits (141), Expect = 2e-11
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
P+Y+ D+AL+++ + + F ++I P+ LP G TV GWG +
Sbjct: 80 PSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVS 137
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI,
protein-protein interaction, non-cognate binding, S1
pocket, primary specificity; 1.70A {Bos taurus} SCOP:
b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E
1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A
1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Length = 245
Score = 71.8 bits (177), Expect = 2e-16
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
F + +Y+ ND+ L+K+ F Q + VCLP + G + GWG TR+ +
Sbjct: 89 FKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTN 148
Query: 69 SLSSAI 74
+ +
Sbjct: 149 ANTPDR 154
Score = 58.4 bits (142), Expect = 2e-11
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 75 PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
Y ++I+ND+ L+K+ F Q + VCLP + G + GWG TR+
Sbjct: 92 SKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTN 148
>2xw9_A Complement factor D; immune system, hydrolase, serine protease,
alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB:
2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A
1fdp_A 2xwa_A 1dst_A 4d9q_A
Length = 228
Score = 71.4 bits (176), Expect = 2e-16
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
++ HP P +D+ L+++ + + P+ + G VAGWG
Sbjct: 73 LRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVN 132
Query: 66 HASSLS 71
HA
Sbjct: 133 HAGRRP 138
Score = 54.9 bits (133), Expect = 3e-10
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
+I +D+ L+++ + + P+ + G VAGWG HAG
Sbjct: 85 TIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGR 136
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural
proteo europe, spine, structural genomics, hydrolase;
HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Length = 223
Score = 71.0 bits (175), Expect = 2e-16
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
S HP+Y+ ND+ LIK+D+ V I + + Q G S V+GWG +
Sbjct: 70 SLSVRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIASQCPT-AGNSCLVSGWGLLAN 128
Score = 55.6 bits (135), Expect = 1e-10
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 126
P Y ++ND+ LIK+D+ V I + + Q G S V+GWG +
Sbjct: 76 PEYNRPLLANDLMLIKLDESVSESDTIRSISIASQCPT-AGNSCLVSGWGLLAN 128
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease,
fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Length = 252
Score = 71.6 bits (176), Expect = 2e-16
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRT 64
VH ++ + ND+AL+++ D + VCLP ++L ++G+G+
Sbjct: 83 IVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKH 142
Query: 65 RHASSLSSAI 74
S S
Sbjct: 143 EALSPFYSER 152
Score = 55.8 bits (135), Expect = 2e-10
Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 79 SISNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
+ ND+AL+++ D + VCLP ++L ++G+G+
Sbjct: 92 TYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALS 146
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG;
0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A
1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A*
1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E
1pqa_A*
Length = 224
Score = 71.0 bits (175), Expect = 3e-16
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
VHP YS ++ ND+A++K+ + +I L G SATVAGWG T
Sbjct: 73 RVHPSYSGNN--NDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGG 130
Query: 69 SLSSAI 74
S +
Sbjct: 131 SSTPVN 136
Score = 62.2 bits (152), Expect = 5e-13
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 75 PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
P+Y +ND+A++K+ + +I L G SATVAGWG T G
Sbjct: 76 PSYSGNNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGG 130
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 72.1 bits (177), Expect = 4e-16
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 10 FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV---GKSATVAGWGRTR 65
F+H Y+ + F ND+ALIK++ VV +I P+CLP + + T +GWG T+
Sbjct: 235 FIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ 294
Score = 59.4 bits (144), Expect = 1e-11
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 75 PTY---VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV---GKSATVAGWGRTR 125
Y ND+ALIK++ VV +I P+CLP + + T +GWG T+
Sbjct: 238 EGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ 294
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor
complex, blood coagulation, CL PAIR of basic residues,
disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A
{Homo sapiens}
Length = 317
Score = 71.3 bits (175), Expect = 6e-16
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWG 62
VH +Y ND++L++++ + +PVC P++ + ++GW
Sbjct: 162 THVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWA 221
Query: 63 RTRHASS 69
R
Sbjct: 222 RNGTDLG 228
Score = 56.6 bits (137), Expect = 1e-10
Identities = 11/57 (19%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTR 125
Y + ND++L++++ + +PVC P++ + ++GW R
Sbjct: 168 MRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNG 224
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes
scabiei type hominis}
Length = 235
Score = 69.9 bits (172), Expect = 8e-16
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 8 QSFVHPQYSPSDFRNDVALIKIDKDVVFKQHII-PVCLPDQTVKL-VGKSATVAGWGRTR 65
+ +Y P +N+ A+I+ + + + LP S V+GWG T
Sbjct: 70 KKIYIVRYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTN 129
Query: 66 HASSLSSAI 74
S S
Sbjct: 130 FKSLEYSGD 138
Score = 55.3 bits (134), Expect = 2e-10
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 4/59 (6%)
Query: 74 IPTYVS--ISNDVALIKIDKDVVFKQHII-PVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
I Y + N+ A+I+ + + + LP S V+GWG T
Sbjct: 74 IVRYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKS 132
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 242
Score = 70.0 bits (172), Expect = 9e-16
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 7 RQSFVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV---GKSATVAGWG 62
F+H Y+ + F ND+ALIK++ VV +I P+CLP + + T +GWG
Sbjct: 71 EAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWG 130
Query: 63 RTRH 66
T+
Sbjct: 131 LTQR 134
Score = 58.8 bits (143), Expect = 1e-11
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 75 PTY---VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV---GKSATVAGWGRTRH 126
Y ND+ALIK++ VV +I P+CLP + + T +GWG T+
Sbjct: 77 EGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQR 134
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor,
disease mutation glycoprotein, hydrolase, zymogen,
secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP:
b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A*
1hne_E 2rg3_A* 1b0f_A*
Length = 218
Score = 69.1 bits (170), Expect = 1e-15
Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 8 QSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 66
Q Y P + ND+ +++++ ++ LP Q +L G GWG
Sbjct: 73 QRIFENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGR 132
Query: 67 ASSLSS 72
++S
Sbjct: 133 NRGIAS 138
Score = 54.1 bits (131), Expect = 5e-10
Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
++ ND+ +++++ ++ LP Q +L G GWG
Sbjct: 84 NLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNR 134
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation;
1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Length = 230
Score = 69.5 bits (171), Expect = 1e-15
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLP---DQTVKLVGKSATV 58
+N+ + H ++P + NDVALIKI V + +I P+ LP + K ATV
Sbjct: 67 AVVNSERIISHSMFNPDTYLNDVALIKIPH-VEYTDNIQPIRLPSGEELNNKFENIWATV 125
Query: 59 AGWGRTRHASSL 70
+GWG++ + +
Sbjct: 126 SGWGQSNTDTVI 137
Score = 52.6 bits (127), Expect = 2e-09
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLP---DQTVKLVGKSATVAGWGRT 124
+ NDVALIKI V + +I P+ LP + K ATV+GWG++
Sbjct: 78 SMFNPDTYLNDVALIKIPH-VEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQS 131
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Length = 234
Score = 69.1 bits (170), Expect = 1e-15
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
++ F +P Y P+ D+ L+++ + +++ + LP + + G VAGWGRT
Sbjct: 70 KKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTH 129
Query: 66 HASSLSS 72
+++S S
Sbjct: 130 NSASWSD 136
Score = 51.8 bits (125), Expect = 4e-09
Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
+ D+ L+++ + +++ + LP + + G VAGWGRT ++
Sbjct: 82 TREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSA 132
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus
musculus} SCOP: b.47.1.2
Length = 225
Score = 69.1 bits (170), Expect = 1e-15
Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 7 RQSFVHPQYS---PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
QS HP Y+ P D +D+ LI++ + PV L + K VG+ ++GWG
Sbjct: 69 AQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCPK-VGQKCIISGWGT 127
Query: 64 TRHASSLSSAIPTYVSIS 81
+
Sbjct: 128 VTSPQENFPNTLNCAEVK 145
Score = 57.6 bits (140), Expect = 2e-11
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 75 PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
S+D+ LI++ + PV L + K VG+ ++GWG
Sbjct: 80 SNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCPK-VGQKCIISGWGTVTSPQ 132
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC
MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB:
1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Length = 227
Score = 69.1 bits (170), Expect = 2e-15
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
++ HP Y+P +F ND+ L+++++ + + P+ LP ++ G++ +VAGWG+T
Sbjct: 72 KRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTA 131
Query: 66 HASSLS 71
S
Sbjct: 132 PLGKHS 137
Score = 51.0 bits (123), Expect = 6e-09
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
+ SND+ L+++++ + + P+ LP ++ G++ +VAGWG+T G
Sbjct: 84 NFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLG 134
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease;
1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Length = 240
Score = 69.2 bits (170), Expect = 2e-15
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 2 FKLNTRQSFVHPQYSPSDFR--NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATV 58
+N FVHP ++ + ND+AL+K+ + + LP L +
Sbjct: 70 IPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYI 129
Query: 59 AGWGRTRHASSLSS 72
+GWGR L
Sbjct: 130 SGWGRLYTGGPLPD 143
Score = 58.4 bits (142), Expect = 1e-11
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 75 PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
V+ ND+AL+K+ + + LP L ++GWGR G
Sbjct: 85 SNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGG 139
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes
scabiei type hominis}
Length = 228
Score = 68.8 bits (169), Expect = 2e-15
Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVF-KQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHA 67
Y ND+A++++ + + P LPD + G V+G+G +
Sbjct: 76 VYLSFYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTM 135
Query: 68 SSLSS 72
Sbjct: 136 DPKDH 140
Score = 55.7 bits (135), Expect = 2e-10
Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 79 SISNDVALIKIDKDVVF-KQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
++ ND+A++++ + + P LPD + G V+G+G +
Sbjct: 85 TMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMD 136
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen,
hydrolase, glycoprotein, hydroxylation, phosphoprotein,
sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo
sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S
3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Length = 235
Score = 68.8 bits (169), Expect = 2e-15
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 10 FVHPQYSPSD--FRNDVALIKIDKDVVFKQHIIPVCLPDQTVK---LVGKSATVAGWGRT 64
H ++ + + +D+AL+++D+ +V ++ P+C+ D+ L S V+GWGR
Sbjct: 74 IPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRV 133
Query: 65 RHASSLSS 72
H +
Sbjct: 134 FHKGRSAL 141
Score = 60.7 bits (148), Expect = 2e-12
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 75 PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVK---LVGKSATVAGWGRTRHAG 128
+ ++D+AL+++D+ +V ++ P+C+ D+ L S V+GWGR H G
Sbjct: 81 AAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKG 137
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease
inhibitor, protease, GLYC secreted, serine protease
inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo
sapiens}
Length = 283
Score = 69.3 bits (170), Expect = 2e-15
Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQT----VKLVGKSATVAGWG 62
VH +Y ND++L++++ + +PVC P++ + + ++GW
Sbjct: 121 THVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWA 180
Query: 63 RTRHASS 69
R
Sbjct: 181 RNGTDLG 187
Score = 55.9 bits (135), Expect = 2e-10
Identities = 11/57 (19%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQT----VKLVGKSATVAGWGRTR 125
Y + ND++L++++ + +PVC P++ + + ++GW R
Sbjct: 127 MRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNG 183
>1z8g_A Serine protease hepsin; serine protease hepsin, protease,
hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A
{Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A
1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Length = 372
Score = 70.2 bits (172), Expect = 2e-15
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 10 FVHPQYSPSD------FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWG 62
H Y P ND+AL+ + + ++I PVCLP LV GK TV GWG
Sbjct: 193 VYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWG 252
Query: 63 RTRHASSLSS 72
T++ +
Sbjct: 253 NTQYYGQQAG 262
Score = 63.2 bits (154), Expect = 5e-13
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 66 HASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRT 124
H L P SND+AL+ + + ++I PVCLP LV GK TV GWG T
Sbjct: 195 HGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNT 254
Query: 125 RHAG 128
++ G
Sbjct: 255 QYYG 258
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR
sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo
sapiens} SCOP: b.47.1.2 g.18.1.1
Length = 333
Score = 69.4 bits (170), Expect = 3e-15
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 7 RQSFVHPQYS-------PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV---GKSA 56
F+HP + ++F ND+AL+++ V + P+CLP + G
Sbjct: 151 EHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLG 210
Query: 57 TVAGWGRTRH 66
++GWGRT
Sbjct: 211 LISGWGRTEK 220
Score = 59.4 bits (144), Expect = 1e-11
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV---GKSATVAGWGRTRHAG 128
+ ND+AL+++ V + P+CLP + G ++GWGRT
Sbjct: 170 NFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRD 222
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A*
4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A*
2hvx_A* 3s0n_A* 2rdl_A
Length = 226
Score = 67.5 bits (166), Expect = 5e-15
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
+ F HP+Y+ S +D+ L+K+ + + + P Q + G+ VAGWGRT
Sbjct: 73 IKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTG 132
Query: 66 HASSLS 71
S
Sbjct: 133 VLKPGS 138
Score = 50.6 bits (122), Expect = 1e-08
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 75 PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
P Y ++ +D+ L+K+ + + + P Q + G+ VAGWGRT
Sbjct: 79 PKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLK 135
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase,
secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A
2zgj_A
Length = 240
Score = 67.6 bits (166), Expect = 5e-15
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 7 RQSFVHPQYSPSD-FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRT 64
+ + HP+Y P ND+AL+++D V + I P+ LP + + G ++AGWG T
Sbjct: 69 KAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLT 128
Query: 65 RHASSLS 71
LS
Sbjct: 129 HQGGRLS 135
Score = 56.1 bits (136), Expect = 1e-10
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 77 YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
++ ND+AL+++D V + I P+ LP + + G ++AGWG T G
Sbjct: 80 VPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGR 133
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease,
zymogen; 2.50A {Mus musculus} PDB: 3g01_A
Length = 227
Score = 67.5 bits (166), Expect = 5e-15
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
++ HP Y+P D ND+ L+K+ ++ + + P+ LP + + G VAGWG+
Sbjct: 73 AKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVT 132
Query: 66 HASSLS 71
Sbjct: 133 PDGEFP 138
Score = 49.8 bits (120), Expect = 2e-08
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 75 PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
P Y SND+ L+K+ ++ + + P+ LP + + G VAGWG+ G
Sbjct: 79 PDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDG 135
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes,
fibrinogen binding, glycosylati hydrolase; 1.43A
{Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A*
Length = 234
Score = 67.6 bits (166), Expect = 6e-15
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 8 QSFVHP-QYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
+ F+ P + + D+ LIK+D V +HI+P+ LP VG + GWG
Sbjct: 70 EKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPSSPPS-VGSVCHIMGWGSITP 128
Query: 67 ASSLSSAIPTYVSI 80
+P I
Sbjct: 129 IKVTYPDVPYCAYI 142
Score = 57.6 bits (140), Expect = 3e-11
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 77 YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
+ D+ LIK+D V +HI+P+ LP VG + GWG
Sbjct: 80 DEVLDKDIMLIKLDSRVSNSEHIVPLSLPSSPPS-VGSVCHIMGWGSITPIK 130
>1cgh_A Cathepsin G; inflammation, specificity, serine protease,
hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A*
1kyn_A*
Length = 224
Score = 67.5 bits (166), Expect = 6e-15
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
R++ HPQY+ +ND+ L+++ + V +++ PV LP L G TVAGWGR
Sbjct: 72 RRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVS 131
Query: 66 H 66
Sbjct: 132 M 132
Score = 50.6 bits (122), Expect = 9e-09
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 75 PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
P Y +I ND+ L+++ + V +++ PV LP L G TVAGWGR
Sbjct: 78 PQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSM 132
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen;
HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A
3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Length = 224
Score = 67.2 bits (165), Expect = 6e-15
Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
P ++ + D ALIK+ + + P T + TVAGWG R S
Sbjct: 71 LQAPGFTKETYGKDWALIKLAQPINQ-----PTLKIATTTAYNQGTFTVAGWGANREGGS 125
Query: 70 LSS 72
Sbjct: 126 QQR 128
Score = 54.1 bits (131), Expect = 5e-10
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 7/56 (12%)
Query: 75 PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
P + D ALIK+ + + P T + TVAGWG R G
Sbjct: 74 PGFTKETYGKDWALIKLAQPINQ-----PTLKIATTTAYNQGTFTVAGWGANREGG 124
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus}
SCOP: b.47.1.2
Length = 224
Score = 67.1 bits (165), Expect = 6e-15
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
+ +H Y+ +D+ L+K++K V + V LP + + G AGWG+T
Sbjct: 73 EKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTG 132
Query: 66 HASSLS 71
S
Sbjct: 133 VRDPTS 138
Score = 50.2 bits (121), Expect = 1e-08
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 75 PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
+Y V +D+ L+K++K V + V LP + + G AGWG+T
Sbjct: 79 ESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRD 135
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase -
serine proteinase (GAM inactive serine proteinase
(alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP:
b.47.1.2
Length = 240
Score = 67.2 bits (165), Expect = 8e-15
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 7 RQSFVHPQYSPS-----------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS 55
++ HP ++ S D+ ND+ L+++ K + P+ LP + K +G +
Sbjct: 72 SKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPK-LGST 130
Query: 56 ATVAGWGRTRHASSLSSAIPTYVSIS 81
+GWG T V++
Sbjct: 131 CLASGWGSTTPIKFKYPDDLQCVNLK 156
Score = 56.5 bits (137), Expect = 8e-11
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 71 SSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
SND+ L+++ K + P+ LP + K +G + +GWG T
Sbjct: 87 EHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPK-LGSTCLASGWGSTTPIK 143
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG;
2.40A {Bos taurus} SCOP: b.47.1.2
Length = 227
Score = 67.1 bits (165), Expect = 8e-15
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
R+ HP Y+ ND+ L+K+ + + P+ LP ++ G +VAGWGR
Sbjct: 72 RRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLG 131
Query: 66 HASSLS 71
+
Sbjct: 132 VNMPST 137
Score = 49.8 bits (120), Expect = 2e-08
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
+++ND+ L+K+ + + P+ LP ++ G +VAGWGR
Sbjct: 84 TLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNM 134
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Length = 236
Score = 67.2 bits (165), Expect = 8e-15
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 10 FVHPQYSPSDFR--NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 66
F+H ++ D D+AL++++ + LP L + GWG+T
Sbjct: 78 FIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTST 137
Query: 67 ASSLSS 72
LS
Sbjct: 138 GGPLSD 143
Score = 55.7 bits (135), Expect = 2e-10
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 78 VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
V+ D+AL++++ + LP L + GWG+T G
Sbjct: 88 VAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGP 140
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease,
catalytic intermediate, atomic resolution,
hydrolase-hydrolase inhibitor complex; 0.94A {Sus
scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B*
1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A*
1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A*
1esa_A 1esb_A* 1est_A* ...
Length = 240
Score = 67.2 bits (165), Expect = 8e-15
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 10 FVHPQYSPSDFR--NDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRH 66
VHP ++ D D+AL+++ + V ++ LP L + GWG TR
Sbjct: 78 VVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRT 137
Query: 67 ASSLSS 72
L+
Sbjct: 138 NGQLAQ 143
Score = 56.0 bits (136), Expect = 1e-10
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 75 PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRHAG 128
V+ D+AL+++ + V ++ LP L + GWG TR G
Sbjct: 85 TDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNG 139
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus
scrofa} SCOP: b.47.1.2
Length = 241
Score = 66.8 bits (164), Expect = 1e-14
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 10 FVHPQYSPSDF--RNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 66
VH ++ + ND+AL+K+ V I CLP L V GWGR +
Sbjct: 78 VVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQT 137
Query: 67 ASSLSS 72
+
Sbjct: 138 NGASPD 143
Score = 57.6 bits (140), Expect = 3e-11
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 75 PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
+S ND+AL+K+ V I CLP L V GWGR + G
Sbjct: 85 SNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNG 139
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP:
b.47.1.2
Length = 235
Score = 66.5 bits (163), Expect = 2e-14
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
Query: 7 RQSFVHPQYSPS-----------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS 55
RQSF HP Y P D ND+ L+ + + + + LP + K VG +
Sbjct: 67 RQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTKEPK-VGST 125
Query: 56 ATVAGWGRTRHASSLSSAIPTYVSI 80
+GWG T + + S V+I
Sbjct: 126 CLASGWGSTNPSEMVVSHDLQCVNI 150
Score = 55.7 bits (135), Expect = 1e-10
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 81 SNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
SND+ L+ + + + + LP + K VG + +GWG T +
Sbjct: 92 SNDLMLLHLSEPADITGGVKVIDLPTKEPK-VGSTCLASGWGSTNPSE 138
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET:
NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Length = 237
Score = 66.1 bits (162), Expect = 2e-14
Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 7 RQSFVHPQYSPS-----------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS 55
+SF HP ++ S DF +D+ L+++ K + P+ LP + K G
Sbjct: 69 SKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEPK-PGSK 127
Query: 56 ATVAGWGRTRHASSLSSAIPTYVSIS 81
+GWG V I+
Sbjct: 128 CLASGWGSITPTRWQKPDDLQCVFIT 153
Score = 56.4 bits (137), Expect = 8e-11
Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 71 SSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
IP S+D+ L+++ K + P+ LP + K G +GWG
Sbjct: 84 LQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEPK-PGSKCLASGWGSITPTR 140
>2zch_P Prostate-specific antigen; human PSA, kallikrein related
peptidases, antibodies, prostate cancer, glycoprotein,
hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens}
PDB: 2zck_P* 2zcl_P* 3qum_P*
Length = 237
Score = 65.7 bits (161), Expect = 2e-14
Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 12/86 (13%)
Query: 7 RQSFVHPQYSPS-----------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS 55
SF HP Y S D +D+ L+++ + + + LP Q +G +
Sbjct: 69 SHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPTQEPA-LGTT 127
Query: 56 ATVAGWGRTRHASSLSSAIPTYVSIS 81
+GWG L+ V +
Sbjct: 128 CYASGWGSIEPEEFLTPKKLQCVDLH 153
Score = 54.9 bits (133), Expect = 3e-10
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 81 SNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
S+D+ L+++ + + + LP Q +G + +GWG
Sbjct: 94 SHDLMLLRLSEPAELTDAVKVMDLPTQEPA-LGTTCYASGWGSIEPEE 140
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor,
hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB:
1ybw_A 2r0k_A
Length = 283
Score = 66.2 bits (162), Expect = 3e-14
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 7 RQSFVHPQYSPSD-FRNDVALIKI----DKDVVFKQHIIPVCLPDQTVKL-VGKSATVAG 60
+ + YS + +D+ LI++ D+ Q + P+CLP+ G +AG
Sbjct: 108 EKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAG 167
Query: 61 WGRTRHASSLSSAI 74
WG S S+
Sbjct: 168 WGHLDENVSGYSSS 181
Score = 54.2 bits (131), Expect = 6e-10
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 76 TYVSISNDVALIKI----DKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
+ +D+ LI++ D+ Q + P+CLP+ G +AGWG
Sbjct: 118 VFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENV 175
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody,
allosteric inhibitor, EGF-like DO glycoprotein,
hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo
sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Length = 248
Score = 65.7 bits (161), Expect = 3e-14
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 7 RQSFVHPQYSPSD-FRNDVALIKI----DKDVVFKQHIIPVCLPDQTVKLV-GKSATVAG 60
+ + YS + +D+ LI++ D+ Q + P+CLP+ G +AG
Sbjct: 73 EKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAG 132
Query: 61 WGRTRHASSLSSAI 74
WG S S+
Sbjct: 133 WGHLDENVSGYSSS 146
Score = 53.4 bits (129), Expect = 1e-09
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 79 SISNDVALIKI----DKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRHAG 128
+D+ LI++ D+ Q + P+CLP+ G +AGWG
Sbjct: 86 PSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENV 140
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation,
fibrinolysis, plasminogen activation; HET: ABV; 1.45A
{Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U*
1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U*
2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U*
1vj9_U* 1sc8_U* ...
Length = 247
Score = 65.4 bits (160), Expect = 5e-14
Identities = 17/75 (22%), Positives = 25/75 (33%), Gaps = 7/75 (9%)
Query: 7 RQSFVHPQYSPS--DFRNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVA 59
+H YS ND+AL+KI + I + LP G S +
Sbjct: 79 ENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEIT 138
Query: 60 GWGRTRHASSLSSAI 74
G+G+ L
Sbjct: 139 GFGKENSTDYLYPEQ 153
Score = 52.3 bits (126), Expect = 2e-09
Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Query: 81 SNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
ND+AL+KI + I + LP G S + G+G+
Sbjct: 95 HNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTD 147
>2jde_A Urokinase-type plasminogen activator; plasminogen activation,
EGF-like domain, blood coagulation, inhibitor complex,
UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Length = 276
Score = 65.8 bits (161), Expect = 5e-14
Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Query: 7 RQSFVHPQYSPS--DFRNDVALIKIDK----DVVFKQHIIPVCLPDQTVKL-VGKSATVA 59
+H YS ND+AL+KI + I +CLP G S +
Sbjct: 102 ENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEIT 161
Query: 60 GWGRTRHASSLSSAI 74
G+G+ L
Sbjct: 162 GFGKENSTDYLYPEQ 176
Score = 53.1 bits (128), Expect = 2e-09
Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Query: 81 SNDVALIKIDK----DVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
ND+AL+KI + I +CLP G S + G+G+
Sbjct: 118 HNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTD 170
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase;
1.42A {Equus caballus} SCOP: b.47.1.2
Length = 237
Score = 63.8 bits (156), Expect = 1e-13
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 12/85 (14%)
Query: 7 RQSFVHPQYSPS-----------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS 55
SF+ PQ+ S D +D+ L+++ + + + LP Q K +G +
Sbjct: 69 SDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEPK-LGST 127
Query: 56 ATVAGWGRTRHASSLSSAIPTYVSI 80
+GWG ++ S V +
Sbjct: 128 CYTSGWGLISTFTNRGSGTLQCVEL 152
Score = 54.9 bits (133), Expect = 3e-10
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 71 SSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
+ Y IS+D+ L+++ + + + LP Q K +G + +GWG
Sbjct: 84 KKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEPK-LGSTCYTSGWGLISTFT 140
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP:
b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Length = 497
Score = 64.5 bits (157), Expect = 2e-13
Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 10/98 (10%)
Query: 3 KLNTRQSFVHPQYS---------PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-V 52
L HP Y+ P + DVALIK+ + + Q I P+CLP
Sbjct: 280 DLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRA 339
Query: 53 GKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKID 90
+ + + + I + L + +
Sbjct: 340 LRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKE 377
Score = 54.1 bits (130), Expect = 8e-10
Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Query: 68 SSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
+ DVALIK+ + + Q I P+CLP + + +
Sbjct: 294 INGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKE 353
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B
1qrz_A
Length = 247
Score = 63.4 bits (155), Expect = 3e-13
Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
F+ P D+AL+K+ V +IP CLP + + GWG T+
Sbjct: 95 FLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTF 148
Query: 69 S 69
Sbjct: 149 G 149
Score = 56.9 bits (138), Expect = 5e-11
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 82 NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
D+AL+K+ V +IP CLP + + GWG T+
Sbjct: 101 KDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQG 146
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL
SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Length = 791
Score = 63.5 bits (154), Expect = 5e-13
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
F+ P D+AL+K+ V +IP CLP + + GWG T+
Sbjct: 639 FLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQ 689
Score = 58.1 bits (140), Expect = 4e-11
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 82 NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 125
D+AL+K+ V +IP CLP + + GWG T+
Sbjct: 645 KDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQ 689
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein,
zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo
sapiens} SCOP: b.47.1.2
Length = 221
Score = 62.2 bits (152), Expect = 6e-13
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
Q F++ Y + ND+ LI++ + V LP Q + G GWGR
Sbjct: 76 AQVFLNN-YDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVG 134
Query: 66 HASSLSS 72
+
Sbjct: 135 AHDPPAQ 141
Score = 50.6 bits (122), Expect = 9e-09
Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
+ ND+ LI++ + V LP Q + G GWGR
Sbjct: 87 NKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDP 138
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG;
1.70A {Homo sapiens}
Length = 238
Score = 60.7 bits (148), Expect = 2e-12
Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 13/86 (15%)
Query: 7 RQSFVHPQYSPS-----------DFRNDVALIKIDKDV-VFKQHIIPVCLPDQTVKLVGK 54
+SF HP ++ S D+ +D+ L+++ + + V LP + + VG
Sbjct: 69 SESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPTEEPE-VGS 127
Query: 55 SATVAGWGRTRHASSLSSAIPTYVSI 80
+ +GWG + V +
Sbjct: 128 TCLASGWGSIEPENFSFPDDLQCVDL 153
Score = 51.4 bits (124), Expect = 5e-09
Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 81 SNDVALIKIDKDV-VFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
S+D+ L+++ + + V LP + + VG + +GWG
Sbjct: 94 SHDLMLLRLTEPADTITDAVKVVELPTEEPE-VGSTCLASGWGSIEPEN 141
>2asu_B Hepatocyte growth factor-like protein; serine proteinase,
beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Length = 234
Score = 60.7 bits (148), Expect = 2e-12
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Query: 10 FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
P + + L+K+++ V Q + +CLP + + G +AGWG T+
Sbjct: 78 VCGPSG------SQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTG 131
Query: 69 S 69
+
Sbjct: 132 N 132
Score = 57.2 bits (139), Expect = 4e-11
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 82 NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
+ + L+K+++ V Q + +CLP + + G +AGWG T+ G
Sbjct: 84 SQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTG 131
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A,
LUNG; chymotrypsin homology, hormone/growth factor
complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Length = 240
Score = 59.9 bits (146), Expect = 4e-12
Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 6 TRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRT 64
+Q Q +D+ L+K+ + V + + LP+ + S +V GWG T
Sbjct: 67 CKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYT 126
Query: 65 RHASS 69
+
Sbjct: 127 GLINY 131
Score = 54.5 bits (132), Expect = 3e-10
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 82 NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
+D+ L+K+ + V + + LP+ + S +V GWG T +
Sbjct: 83 SDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLINY 131
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP:
b.47.1.2 PDB: 2kai_B 1hia_B
Length = 152
Score = 57.9 bits (141), Expect = 6e-12
Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 17 PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
D+ +D+ L+++ + + LP Q + +G + +GWG
Sbjct: 3 GKDYSHDLMLLRLQSPAKITDAVKVLELPTQEPE-LGSTCEASGWGSIEPGPD 54
Score = 57.9 bits (141), Expect = 7e-12
Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 77 YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGHK 130
S+D+ L+++ + + LP Q + +G + +GWG
Sbjct: 3 GKDYSHDLMLLRLQSPAKITDAVKVLELPTQEPE-LGSTCEASGWGSIEPGPDD 55
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 59.3 bits (143), Expect = 1e-11
Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 10/98 (10%)
Query: 3 KLNTRQSFVHPQYS---------PSDFRNDVALIKIDKDVVFKQHIIPVCLPD-QTVKLV 52
L HP Y+ P + DVALIK+ + + Q I P+CLP +
Sbjct: 522 DLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRA 581
Query: 53 GKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKID 90
+ + + + I + L + +
Sbjct: 582 LRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKE 619
Score = 49.3 bits (117), Expect = 4e-08
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 82 NDVALIKIDKDVVFKQHIIPVCLPD-QTVKLVGKSATVAGWGRT 124
DVALIK+ + + Q I P+CLP + + +
Sbjct: 550 YDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQ 593
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human
complement system, glycoprotein, SP, VWFA,; HET: NAG;
1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Length = 509
Score = 59.2 bits (143), Expect = 2e-11
Identities = 15/106 (14%), Positives = 34/106 (32%), Gaps = 15/106 (14%)
Query: 3 KLNTRQSFVHPQYS---------PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV- 52
+ ++ + P + + +D+AL+K+ + V H P+CLP +
Sbjct: 289 EFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLA 348
Query: 53 -----GKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKIDKDV 93
G + S + + S N + ++
Sbjct: 349 LRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTS 394
Score = 50.3 bits (120), Expect = 2e-08
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 6/56 (10%)
Query: 79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV------GKSATVAGWGRTRHAG 128
+D+AL+K+ + V H P+CLP + G +
Sbjct: 314 FYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQS 369
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 31.6 bits (71), Expect = 0.068
Identities = 23/114 (20%), Positives = 33/114 (28%), Gaps = 42/114 (36%)
Query: 5 NTRQSFV---HPQ--YS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATV 58
N ++ V PQ Y R A +D Q IP ++ +K
Sbjct: 372 NGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLD------QSRIP--FSERKLKFS------ 417
Query: 59 AGWGRTR--------HASSLSSAIPTYVSISNDVALIKIDKDVVFKQH--IIPV 102
R H+ L A I+ D+ +V F IPV
Sbjct: 418 -----NRFLPVASPFHSHLLVPASDL---INKDLV----KNNVSFNAKDIQIPV 459
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus
intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Length = 215
Score = 30.7 bits (69), Expect = 0.084
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 5 NTRQSFVHPQY-SPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
N + +V Y + + D A+IK D ++ + + T L G + ++G+
Sbjct: 78 NMTEFYVPSGYINTGASQYDFAVIKTDTNI--GNTVGYRSIRQVT-NLTGTTIKISGYPG 134
Query: 64 TR 65
+
Sbjct: 135 DK 136
>3ess_A Cholix toxin; ADP-ribosyl transferase, domain III (C-terminal
catalytic domain), alpha-beta complex, transferase,
transferase,toxin; HET: 18N; 1.19A {Vibrio cholerae}
PDB: 2q6m_A* 3ki3_A* 3ki1_A* 3ki0_A* 3ki2_A* 3ki4_A*
3ki5_A* 3ki6_A* 3ki7_A* 3ny6_A*
Length = 230
Score = 27.9 bits (61), Expect = 0.93
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 53 GKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPD 106
G+ TV GW HA ++ S IP N + ID++ V K+ I P
Sbjct: 175 GEDETVIGWDMAIHAVAIPSTIPG-----NAYEELAIDEEAVAKEQSIST-KPP 222
>3q9o_A Exotoxin A, cholix toxin; receptor binding domain, beta barrel,
translocation, six ALP bundle, alpha-beta complex,
ADP-ribosylating factor; HET: NAD; 1.79A {Vibrio
cholerae} PDB: 2q5t_A*
Length = 642
Score = 27.2 bits (59), Expect = 2.1
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 53 GKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPD 106
G+ TV GW HA ++ S IP N + ID++ V K+ I P
Sbjct: 586 GEDETVIGWDMAIHAVAIPSTIPG-----NAYEELAIDEEAVAKEQSIST-KPP 633
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase;
2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Length = 246
Score = 26.8 bits (59), Expect = 2.1
Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Query: 15 YSPSDFRNDVALIKIDKDVVFK---QHIIPVCLPDQTVKLVGKSATVAG 60
SP D+A+IK+ + + I P +PD G ++ G
Sbjct: 106 ESPYGQGLDLAIIKLKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLG 154
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural
genomics/proteomics initiative, structural genomics,
lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP:
c.79.1.1 PDB: 1wdw_B*
Length = 388
Score = 26.4 bits (59), Expect = 2.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 44 LPDQTVKLVGKSATVAGWGRTRHASSLSSAIP 75
+ D+ VKLVG A G +H++SL++
Sbjct: 240 VNDKKVKLVGVEAGGKGLESGKHSASLNAGQV 271
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan
biosynthesis, structural genomics; 2.20A {Mycobacterium
tuberculosis} PDB: 2o2j_A
Length = 422
Score = 26.4 bits (59), Expect = 3.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 44 LPDQTVKLVGKSATVAGWGRTRHASSLSSAIP 75
L D V+LVG A G RHA++ ++ P
Sbjct: 271 LDDPGVRLVGFEAAGDGVETGRHAATFTAGSP 302
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken
structural genomics/proteomics initiative, RSGI, NPPSFA;
2.50A {Thermus thermophilus}
Length = 418
Score = 26.4 bits (59), Expect = 3.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 44 LPDQTVKLVGKSATVAGWGRTRHASSLSSAIP 75
LP+ KL+G A G RHA+S+ +
Sbjct: 269 LPEGRPKLIGVEAAGEGLSTGRHAASIGAGKR 300
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila
melanogaster}
Length = 381
Score = 26.4 bits (57), Expect = 3.7
Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Query: 8 QSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVA-GWGRTRH 66
+ ++I+ + F+QH + + +P + V+ G T+
Sbjct: 116 LALYKSNEYCLQVDEACSMIRFSEFTDFEQHYLELKIPSLLLLDHSLPDCVSLGEMLTKS 175
Query: 67 ASSLSSAIPTY 77
A +L A+ +
Sbjct: 176 AGNLEEALNLF 186
Score = 26.0 bits (56), Expect = 4.4
Identities = 5/32 (15%), Positives = 16/32 (50%)
Query: 78 VSISNDVALIKIDKDVVFKQHIIPVCLPDQTV 109
+ + ++I+ + F+QH + + +P +
Sbjct: 126 LQVDEACSMIRFSEFTDFEQHYLELKIPSLLL 157
>2ciu_A TIM21P, import inner membrane translocase subunit TIM21
mitochondrial; mitochondrial import, mitochondrion,
protein transport; 1.6A {Saccharomyces cerevisiae}
Length = 127
Score = 25.4 bits (55), Expect = 4.3
Identities = 11/50 (22%), Positives = 20/50 (40%)
Query: 20 FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
F V++++ +KD+ + +K G+ T W R R S
Sbjct: 11 FNRAVSMVEKNKDIRSLLQCDDGITGKERLKAYGELITNDKWTRNRPIVS 60
Score = 25.4 bits (55), Expect = 5.0
Identities = 9/49 (18%), Positives = 20/49 (40%)
Query: 84 VALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGHKER 132
V++++ +KD+ + +K G+ T W R R ++
Sbjct: 15 VSMVEKNKDIRSLLQCDDGITGKERLKAYGELITNDKWTRNRPIVSTKK 63
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase
family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A
{Hypocrea jecorina} PDB: 2vn7_A*
Length = 599
Score = 26.0 bits (56), Expect = 5.3
Identities = 13/72 (18%), Positives = 19/72 (26%), Gaps = 2/72 (2%)
Query: 52 VGKSATV--AGWGRTRHASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTV 109
G S + T S + V H + QTV
Sbjct: 454 SGASVVGSYSRPTATSFPPSQTPKPGVPSGTPYTPLPCATPTSVAVTFHELVSTQFGQTV 513
Query: 110 KLVGKSATVAGW 121
K+ G +A + W
Sbjct: 514 KVAGNAAALGNW 525
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint
center for structural genomics, J protein structure
initiative; HET: MSE UNL MES; 1.60A {Burkholderia
thailandensis E264}
Length = 122
Score = 25.0 bits (54), Expect = 5.9
Identities = 8/41 (19%), Positives = 12/41 (29%)
Query: 23 DVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
D L +I + + +L GK A W
Sbjct: 27 DAILSHYADGFEMSSPMIVQIAGEPSGRLRGKEQVGAYWRE 67
Score = 25.0 bits (54), Expect = 5.9
Identities = 8/41 (19%), Positives = 12/41 (29%)
Query: 83 DVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 123
D L +I + + +L GK A W
Sbjct: 27 DAILSHYADGFEMSSPMIVQIAGEPSGRLRGKEQVGAYWRE 67
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell
WALL, peptidoglycan synthesis, vancomycin, ADP binding;
HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2
d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Length = 306
Score = 25.6 bits (57), Expect = 5.9
Identities = 8/35 (22%), Positives = 10/35 (28%), Gaps = 7/35 (20%)
Query: 37 QHIIPVCLPDQTVKLVGKSATVA-------GWGRT 64
Q+ P L + A GWGR
Sbjct: 222 QYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRI 256
Score = 25.6 bits (57), Expect = 5.9
Identities = 8/35 (22%), Positives = 10/35 (28%), Gaps = 7/35 (20%)
Query: 97 QHIIPVCLPDQTVKLVGKSATVA-------GWGRT 124
Q+ P L + A GWGR
Sbjct: 222 QYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRI 256
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A
Length = 317
Score = 25.6 bits (57), Expect = 6.4
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 7/35 (20%)
Query: 37 QHIIPVCLPDQTVKLVGKSATVA-------GWGRT 64
Q++IP LP + + + A A WGR
Sbjct: 231 QYLIPCGLPAEQETELKRIARRAFDVLGCTDWGRA 265
Score = 25.6 bits (57), Expect = 6.4
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 7/35 (20%)
Query: 97 QHIIPVCLPDQTVKLVGKSATVA-------GWGRT 124
Q++IP LP + + + A A WGR
Sbjct: 231 QYLIPCGLPAEQETELKRIARRAFDVLGCTDWGRA 265
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase,
tryptophan biosynthesis, pyridoxal phosphate; HET: IPL
PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB:
1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B*
2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B*
1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Length = 396
Score = 25.5 bits (57), Expect = 6.4
Identities = 7/32 (21%), Positives = 11/32 (34%)
Query: 44 LPDQTVKLVGKSATVAGWGRTRHASSLSSAIP 75
+ D +V L+G G H + L
Sbjct: 244 INDTSVGLIGVEPGGHGIETGEHGAPLKHGRV 275
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain
dehydrogenase/reductase, rossmann fold, BIO protein;
HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2
PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Length = 404
Score = 25.5 bits (56), Expect = 6.8
Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Query: 6 TRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR-T 64
Q V+ + ++ ++D D VF + C+ Q VG TV G G T
Sbjct: 217 LNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV--QA--AVGHPLTVYGKGGQT 272
Query: 65 R 65
R
Sbjct: 273 R 273
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids,
nonmevalonate, transferase; HET: C GPP; 2.3A
{Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB:
1w57_A*
Length = 371
Score = 25.3 bits (56), Expect = 7.7
Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 5/64 (7%)
Query: 25 ALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS---LSSAIPTYVSIS 81
A + FK+ ++ K + G G TR S L +V +S
Sbjct: 37 ATKNLSSFYPFKKIVVTSSNITYMKKFTKNYEFIEG-GDTRAESLKKALELIDSEFVMVS 95
Query: 82 NDVA 85
DVA
Sbjct: 96 -DVA 98
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis,
hydrolyase/translation complex; HET: ADP; 1.90A
{Pyrococcus furiosus}
Length = 538
Score = 24.9 bits (55), Expect = 9.3
Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 11/59 (18%)
Query: 24 VALIKIDKDVV-------FKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIP 75
+ ++++D V F + +PV V +VG + G G++ L+ +
Sbjct: 18 SHMEQLEEDCVHRYGVNAFVLYRLPVVKEGMVVGIVGPN----GTGKSTAVKILAGQLI 72
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.135 0.407
Gapped
Lambda K H
0.267 0.0812 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,907,366
Number of extensions: 100498
Number of successful extensions: 612
Number of sequences better than 10.0: 1
Number of HSP's gapped: 398
Number of HSP's successfully gapped: 215
Length of query: 132
Length of database: 6,701,793
Length adjustment: 83
Effective length of query: 49
Effective length of database: 4,384,350
Effective search space: 214833150
Effective search space used: 214833150
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (23.7 bits)