Query psy15304
Match_columns 96
No_of_seqs 172 out of 916
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 17:38:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15304.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15304hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fl0_A Endothelial-monocyte ac 100.0 2.5E-33 8.5E-38 200.2 7.5 95 1-96 69-163 (171)
2 1ntg_A Tyrrs, tyrosyl-tRNA syn 100.0 1.2E-32 4.2E-37 196.8 7.6 94 1-96 73-170 (172)
3 3ers_X TRNA-binding protein YG 99.0 1.5E-10 5E-15 78.0 2.2 39 1-39 74-114 (118)
4 3g48_A Chaperone CSAA; structu 98.8 1.3E-09 4.6E-14 72.6 1.8 34 1-34 77-111 (112)
5 1pxf_A Hypothetical protein YG 98.8 2.1E-09 7.1E-14 71.5 2.6 35 1-35 74-110 (111)
6 1mkh_A Metrs;, C-terminal doma 98.8 2.7E-09 9.3E-14 70.5 3.0 35 1-35 73-107 (107)
7 1pyb_A Methionyl-tRNA syntheta 98.7 5.4E-09 1.9E-13 69.4 2.8 35 1-35 77-111 (111)
8 1gd7_A CSAA protein; oligonucl 98.7 3.8E-09 1.3E-13 70.0 2.0 35 1-35 74-109 (109)
9 2q2i_A AGR_C_4014P, secretion 98.7 6.3E-09 2.2E-13 69.6 2.0 35 1-35 81-116 (116)
10 2nzh_A Protein CSAA; beta barr 98.7 7.6E-09 2.6E-13 69.0 2.0 35 1-35 78-113 (113)
11 2e8g_A Hypothetical protein PH 98.6 1.7E-09 5.7E-14 80.6 -1.8 49 1-59 192-240 (241)
12 2cwp_A Metrs related protein; 98.6 1.2E-08 4.2E-13 67.9 2.2 35 1-35 77-112 (112)
13 2q2h_A AGR_C_4014P, secretion 98.6 1.1E-08 3.9E-13 69.8 2.0 35 1-35 96-131 (131)
14 1rqg_A Methionyl-tRNA syntheta 97.9 1.3E-06 4.3E-11 72.6 0.0 35 1-35 688-722 (722)
15 3bu2_A Putative tRNA-binding p 97.6 3.5E-06 1.2E-10 61.1 -1.5 34 1-34 157-196 (199)
16 1b7y_B Phers, protein (phenyla 95.8 0.0012 4E-08 55.7 -0.9 34 1-34 108-146 (785)
17 2rhq_B Phenylalanyl-tRNA synth 95.1 0.0018 6.1E-08 54.5 -1.9 34 1-34 106-149 (795)
18 3pco_B Phenylalanyl-tRNA synth 94.9 0.0031 1.1E-07 53.1 -0.9 34 1-34 110-147 (795)
19 1op4_A Neural-cadherin; beta s 37.3 22 0.00075 24.4 2.5 49 18-73 39-91 (159)
20 1eci_A Ectatomin; pore-forming 35.9 3.8 0.00013 21.5 -1.2 12 51-62 5-16 (37)
21 4afm_A Endoglucanase CEL5A; hy 27.4 21 0.0007 23.4 1.0 22 50-73 68-89 (134)
22 1ok0_A Tendamistat, alpha-amyl 20.6 48 0.0017 20.0 1.6 15 28-42 48-63 (74)
23 1c3g_A Heat shock protein 40; 20.5 69 0.0023 21.4 2.6 18 22-39 40-57 (170)
No 1
>1fl0_A Endothelial-monocyte activating polypeptide II; RNA-binding domain, OB-fold, tRNA synthetase complex, RNA binding protein; 1.50A {Homo sapiens} SCOP: b.40.4.4 PDB: 1e7z_A 1euj_A
Probab=100.00 E-value=2.5e-33 Score=200.25 Aligned_cols=95 Identities=54% Similarity=0.894 Sum_probs=90.7
Q ss_pred CCcccccceEEEEeCCCcEEEEcCCCCCCCCcEEEecCCCCCCCCCCCccchhhhhhCCCcEECCCeeEEECCeEEEEec
Q psy15304 1 MRGVTSEAMVMCASTPDKVEILAPPSAAKPGDLIQVEGYTRNPDPVLNPKKKIFETVAPDLKTNDSNQATYKGKVWTVEN 80 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~~~v~ll~p~~~~~~G~rv~~~g~~~~p~~~l~~Kkk~we~v~~~l~t~~~g~a~~~~~~l~~~~ 80 (96)
|||++||||||||.+++.+.++.+|+++++|++|.|+||+++|++++|||||+||++|++|+|+++|+|+|+|.||++++
T Consensus 69 lrGv~SeGMvLcs~~~~~~~il~~~~~~~~G~~v~~~g~~~~p~~~l~~kkk~~e~~~~~l~t~~~~va~~k~~~~~~~~ 148 (171)
T 1fl0_A 69 MRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKG 148 (171)
T ss_dssp SSSCEECCEECEEEETTEEEECBCCTTCCTTCBCCCTTSCCCCCSSCCTTTCTHHHHGGGEEECTTSBEEETTEECEETT
T ss_pred EccEeccCEEEEEecCCCEEEEECCCCCCCCCEEEeCCCCCCCccccCchhhhHHhhCCCcEECCCeEEEECCEEEEECC
Confidence 79999999999999878899999999999999999999999999999999999999999999999999999999998865
Q ss_pred ccceEEeeecCCeeeC
Q psy15304 81 VEGFVTSQSLANVNIK 96 (96)
Q Consensus 81 ~~g~~~~~~l~~~~ik 96 (96)
+ |+|++++|+|+.||
T Consensus 149 ~-g~~~~~~l~~~~~~ 163 (171)
T 1fl0_A 149 K-GVCRAQTMSNSGIK 163 (171)
T ss_dssp T-EECBCSSCCSCEEC
T ss_pred C-ccEEeeecCCCeEe
Confidence 4 99999999999986
No 2
>1ntg_A Tyrrs, tyrosyl-tRNA synthetase; beta barrel, ligase; 2.21A {Homo sapiens} SCOP: b.40.4.4
Probab=99.97 E-value=1.2e-32 Score=196.76 Aligned_cols=94 Identities=39% Similarity=0.689 Sum_probs=88.5
Q ss_pred CCcccccceEEEEeCCC---cEEEEcCCCCCCCCcEEEecCC-CCCCCCCCCccchhhhhhCCCcEECCCeeEEECCeEE
Q psy15304 1 MRGVTSEAMVMCASTPD---KVEILAPPSAAKPGDLIQVEGY-TRNPDPVLNPKKKIFETVAPDLKTNDSNQATYKGKVW 76 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~~---~v~ll~p~~~~~~G~rv~~~g~-~~~p~~~l~~Kkk~we~v~~~l~t~~~g~a~~~~~~l 76 (96)
|||++||||||||.+++ .++++.+|.++++|++|.|+|| +++|+++||||||+||++|++|+|+++|+|+|+|.+|
T Consensus 73 lrGv~S~GMvLcs~~e~~~~~v~il~~~~~~~~G~~v~~~g~~~~~p~~~l~~kkk~~e~~~~~l~t~~~~~a~~k~~~~ 152 (172)
T 1ntg_A 73 MRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNF 152 (172)
T ss_dssp ETTEEECCEECEEEEESSSEEEEECBCCBTCCTTCEEEETTCSSCCCCSSBCGGGCHHHHHHTTEEECTTSBEEETTEEE
T ss_pred ecceecCCEEeEecccccCCCeEEEECCCCCCCCCEEEeCCcCCCCCccccCcchhhHHhhCCCcEECCCCEEEECCEEE
Confidence 69999999999998754 6899999999999999999999 7899999999999999999999999999999999999
Q ss_pred EEecccceEEeeecCCeeeC
Q psy15304 77 TVENVEGFVTSQSLANVNIK 96 (96)
Q Consensus 77 ~~~~~~g~~~~~~l~~~~ik 96 (96)
+++. |+|++++|+|+.||
T Consensus 153 ~~~~--g~~~~~~l~~~~i~ 170 (172)
T 1ntg_A 153 MTKL--GSISCKSLKGGNIS 170 (172)
T ss_dssp EETT--EECBCSSCTTCEEE
T ss_pred EeCC--CCEEeeecCCCEEE
Confidence 8864 99999999999985
No 3
>3ers_X TRNA-binding protein YGJH; oligonucleotide-oligosaccharide binding fold; 1.87A {Escherichia coli}
Probab=98.98 E-value=1.5e-10 Score=78.00 Aligned_cols=39 Identities=36% Similarity=0.572 Sum_probs=33.5
Q ss_pred CCcccccceEEEEeCCC--cEEEEcCCCCCCCCcEEEecCC
Q psy15304 1 MRGVTSEAMVMCASTPD--KVEILAPPSAAKPGDLIQVEGY 39 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~~--~v~ll~p~~~~~~G~rv~~~g~ 39 (96)
|||++||||||||.+++ .+.|+.|+.++++|+||.||.+
T Consensus 74 irGv~S~GMll~a~~~d~~~~~ll~p~~~~~~G~rv~~e~~ 114 (118)
T 3ers_X 74 MRGETSECMLLCAETDDGSESVLLTPERMMPAGVRVVLDHH 114 (118)
T ss_dssp ETTEEECCEECEEECTTSSCEEECCCSSCCCTTCBCCCC--
T ss_pred ECCeeceEEEEEEEcCCCCcEEEEcCCCCCCCCCEEEEeee
Confidence 69999999999998765 4889999999999999999864
No 4
>3g48_A Chaperone CSAA; structural genomics, niaid structural centers for infectious diseases, center for structural GENO infectious diseases; 1.50A {Bacillus anthracis} SCOP: b.40.4.4
Probab=98.79 E-value=1.3e-09 Score=72.62 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=31.0
Q ss_pred CCcccccceEEEEeCCC-cEEEEcCCCCCCCCcEE
Q psy15304 1 MRGVTSEAMVMCASTPD-KVEILAPPSAAKPGDLI 34 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~~-~v~ll~p~~~~~~G~rv 34 (96)
|||++||||||||++++ +++|+.|+.++++|+||
T Consensus 77 irGv~S~GMl~s~~~~~~~~~ll~p~~~~~~G~~i 111 (112)
T 3g48_A 77 VAGFKSEVLVLGGVPEAGDVVLLQPNMELPNGTKI 111 (112)
T ss_dssp ETTEEECSEECEEEEETTEEEECCCSSCCCTTCBC
T ss_pred ECCeecCcEEeEeecCCCCEEEEeCCCCCCCCCCc
Confidence 69999999999997654 69999999999999997
No 5
>1pxf_A Hypothetical protein YGJH; oligonucleotide-oligosaccharide binding fold, OB fold, beta- barrel; 1.87A {Escherichia coli} PDB: 3ers_X
Probab=98.79 E-value=2.1e-09 Score=71.51 Aligned_cols=35 Identities=40% Similarity=0.629 Sum_probs=30.6
Q ss_pred CCcccccceEEEEeCCC--cEEEEcCCCCCCCCcEEE
Q psy15304 1 MRGVTSEAMVMCASTPD--KVEILAPPSAAKPGDLIQ 35 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~~--~v~ll~p~~~~~~G~rv~ 35 (96)
|||++||||||||.+++ .+.|+.|+.++++|+||.
T Consensus 74 lrGv~S~GMlL~a~~ed~~~~~l~~p~~~~~~G~~vv 110 (111)
T 1pxf_A 74 MRGETSECMLLCAETDDGSESVLLTPERMMPAGVRVV 110 (111)
T ss_dssp BTTBCCCCCBCEEECTTSCCEEECCCSSCCCTTCBCC
T ss_pred CCCEecceEEEEecccCCCcEEEEcCCCCCCCCCEec
Confidence 69999999999998754 488999998899999974
No 6
>1mkh_A Metrs;, C-terminal domain of methionyl-tRNA synthetase; beta barrel, dimerization domain, ligase; 2.01A {Pyrococcus abyssi} SCOP: b.40.4.4
Probab=98.78 E-value=2.7e-09 Score=70.50 Aligned_cols=35 Identities=29% Similarity=0.600 Sum_probs=30.8
Q ss_pred CCcccccceEEEEeCCCcEEEEcCCCCCCCCcEEE
Q psy15304 1 MRGVTSEAMVMCASTPDKVEILAPPSAAKPGDLIQ 35 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~~~v~ll~p~~~~~~G~rv~ 35 (96)
|||++||||||||++.+.+.++.||+++++|+++.
T Consensus 73 lrGv~S~GMl~s~~~~~gi~~l~p~~~~~~G~~i~ 107 (107)
T 1mkh_A 73 LRGIGSQGMLLAADDGERVALLMPDKEVKLGAKVR 107 (107)
T ss_dssp C-CCEECCCBCEEECSSCEEECCCSSCCCTTCEEC
T ss_pred EcCeeeccEEEEccCCCcEEEEeCCCCCCCCCCCC
Confidence 79999999999998666799999999999999973
No 7
>1pyb_A Methionyl-tRNA synthetase beta subunit; oligonucleotide, oligosaccharide-binding fold, OB-fold, beta-barrel, RNA binding protein; 2.50A {Aquifex aeolicus} SCOP: b.40.4.4
Probab=98.71 E-value=5.4e-09 Score=69.43 Aligned_cols=35 Identities=23% Similarity=0.524 Sum_probs=31.7
Q ss_pred CCcccccceEEEEeCCCcEEEEcCCCCCCCCcEEE
Q psy15304 1 MRGVTSEAMVMCASTPDKVEILAPPSAAKPGDLIQ 35 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~~~v~ll~p~~~~~~G~rv~ 35 (96)
|||++||||||||++++++.++.+|+++++|+++.
T Consensus 77 lrGv~S~GMl~sa~e~~~~~il~~~~~~~~G~~v~ 111 (111)
T 1pyb_A 77 IFGIESQGMILAASDGENLSVIVPDRDVKEGAKLS 111 (111)
T ss_dssp TTSCCBSSEECEEECSSCEEEEEESSCCCTTEECC
T ss_pred EccEeeccEEEEeccCCceEEEECCCCCCCCCCCC
Confidence 79999999999998766799999999999999863
No 8
>1gd7_A CSAA protein; oligonucleotide-binding fold, functional dimer, hydrophobic cavity, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: b.40.4.4
Probab=98.71 E-value=3.8e-09 Score=70.01 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=30.8
Q ss_pred CCcccccceEEEEeCCC-cEEEEcCCCCCCCCcEEE
Q psy15304 1 MRGVTSEAMVMCASTPD-KVEILAPPSAAKPGDLIQ 35 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~~-~v~ll~p~~~~~~G~rv~ 35 (96)
|||++||||||||++++ .+.++.||+++++|++++
T Consensus 74 lrGv~S~GMl~sa~~~~~~i~~l~~~~~~~~G~~i~ 109 (109)
T 1gd7_A 74 VAGFLSEVLVLGVPDEAGRVVLLAPDREVPLGGKVF 109 (109)
T ss_dssp ETTEEECSEECEEECTTSCEEEEEESSCCCTTCBCC
T ss_pred eccEeecCEEEEeecCCCcEEEEeCCCCCCCCCCCC
Confidence 69999999999998653 699999999999999863
No 9
>2q2i_A AGR_C_4014P, secretion chaperone; beta barrel, OB fold, homodimer, protein secretio; 1.55A {Agrobacterium tumefaciens str}
Probab=98.67 E-value=6.3e-09 Score=69.63 Aligned_cols=35 Identities=11% Similarity=0.172 Sum_probs=30.8
Q ss_pred CCcccccceEEEEeCC-CcEEEEcCCCCCCCCcEEE
Q psy15304 1 MRGVTSEAMVMCASTP-DKVEILAPPSAAKPGDLIQ 35 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~-~~v~ll~p~~~~~~G~rv~ 35 (96)
|||++||||||||+++ +.+.++.||+++++|++++
T Consensus 81 irGv~S~GMl~sa~~~~~~i~ll~p~~~~~~G~~i~ 116 (116)
T 2q2i_A 81 IGPFRSEVLTLGFADANGDIVLAAVERPVPNGEKMC 116 (116)
T ss_dssp ETTEEECCEECEEECTTSCEEEEEESSCCCTTCBCC
T ss_pred ECCEEeCCEEEEeecCCCcEEEEeCCCCCCCCCCCC
Confidence 6999999999999865 4699999999999999863
No 10
>2nzh_A Protein CSAA; beta barrel, oligonucleotide/oligosaccharide binding fold, H chaperone; 1.90A {Bacillus subtilis} PDB: 2nzo_A
Probab=98.65 E-value=7.6e-09 Score=68.97 Aligned_cols=35 Identities=26% Similarity=0.392 Sum_probs=30.8
Q ss_pred CCcccccceEEEEeCC-CcEEEEcCCCCCCCCcEEE
Q psy15304 1 MRGVTSEAMVMCASTP-DKVEILAPPSAAKPGDLIQ 35 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~-~~v~ll~p~~~~~~G~rv~ 35 (96)
|||++||||||||+++ +.+.++.+|.++++|++++
T Consensus 78 irGv~S~GMl~sa~~~~~~i~ll~~~~~~~~G~~i~ 113 (113)
T 2nzh_A 78 IAGFKSEVLVLGGIPGQGDVVLLQPDQPVPNGTKIG 113 (113)
T ss_dssp ETTEEECSEECEEEEETTEEEEEEESSCCCTTCEEC
T ss_pred ECCEEeCCEEEEeecCCCCEEEEECCCCCCCCCCCC
Confidence 6999999999999764 4699999999999999974
No 11
>2e8g_A Hypothetical protein PH0536; oligonucleotide/oligosaccharide-binding fold, alpha-helices bundle, structural genomics, NPPSFA; 1.70A {Pyrococcus horikoshii}
Probab=98.63 E-value=1.7e-09 Score=80.58 Aligned_cols=49 Identities=22% Similarity=0.308 Sum_probs=35.1
Q ss_pred CCcccccceEEEEeCCCcEEEEcCCCCCCCCcEEEecCCCCCCCCCCCccchhhhhhCC
Q psy15304 1 MRGVTSEAMVMCASTPDKVEILAPPSAAKPGDLIQVEGYTRNPDPVLNPKKKIFETVAP 59 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~~~v~ll~p~~~~~~G~rv~~~g~~~~p~~~l~~Kkk~we~v~~ 59 (96)
|||++|||||+|++. .+...+ .|+.+.+. ++.|..+||||||+||+++.
T Consensus 192 lrGv~SeGMlcsa~E----gl~~~~----~G~I~~Lp--~~~p~~~lnpkkk~~e~~~~ 240 (241)
T 2e8g_A 192 FFGIVSEGMFLGAGE----GVLKNV----KGEIGGLP--KGIPLEALNETRNAVEAFLK 240 (241)
T ss_dssp ETTEEECCEECEETT----EECCBC----BSCTTSCC--BSCCGGGGHHHHHHHHHHHC
T ss_pred cCCcccCcEEeECcc----CCCCCC----CCcEEECC--CCCchhhcCchhhHHHHHhc
Confidence 699999999999974 233322 24222222 46788999999999999864
No 12
>2cwp_A Metrs related protein; structural GEN riken structural genomics/proteomics initiative, RSGI; 2.10A {Pyrococcus horikoshii}
Probab=98.61 E-value=1.2e-08 Score=67.87 Aligned_cols=35 Identities=31% Similarity=0.478 Sum_probs=30.9
Q ss_pred CCcccccceEEEEeCCC-cEEEEcCCCCCCCCcEEE
Q psy15304 1 MRGVTSEAMVMCASTPD-KVEILAPPSAAKPGDLIQ 35 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~~-~v~ll~p~~~~~~G~rv~ 35 (96)
|||++||||||||++++ .+.++.+|+++++|+++.
T Consensus 77 lrGv~S~GMl~sa~~~~~~~~il~~~~~~~~G~~i~ 112 (112)
T 2cwp_A 77 FSGVESQGMLILAETEDGKVYLIPVPEEVPVGARVW 112 (112)
T ss_dssp ETTEEECSEECCEECTTSCEECCBCCTTSCTTCEEC
T ss_pred eCCEecccEEEEeecCCCcEEEEECCCCCCCCCCCC
Confidence 69999999999998644 689999999999999973
No 13
>2q2h_A AGR_C_4014P, secretion chaperone, phage-display derived peptid; beta barrel, OB fold, homodimer, protein secretio; HET: CIT; 1.65A {Agrobacterium tumefaciens str}
Probab=98.61 E-value=1.1e-08 Score=69.83 Aligned_cols=35 Identities=11% Similarity=0.172 Sum_probs=30.8
Q ss_pred CCcccccceEEEEeCC-CcEEEEcCCCCCCCCcEEE
Q psy15304 1 MRGVTSEAMVMCASTP-DKVEILAPPSAAKPGDLIQ 35 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~-~~v~ll~p~~~~~~G~rv~ 35 (96)
|||++||||||||+++ +.+.+|.||+++++|++++
T Consensus 96 irGv~SeGMl~sa~~~~~gi~lL~p~~~~~~G~~i~ 131 (131)
T 2q2h_A 96 IGPFRSEVLTLGFADANGDIVLAAVERPVPNGEKMC 131 (131)
T ss_dssp ETTEEECCEECEEECTTSCEEEEEESSCCCTTCBCC
T ss_pred ECCEEeCcEEEEeecCCCcEEEEeCCCCCCCCCCCC
Confidence 6999999999999865 4699999999999999863
No 14
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1
Probab=97.93 E-value=1.3e-06 Score=72.62 Aligned_cols=35 Identities=29% Similarity=0.600 Sum_probs=0.0
Q ss_pred CCcccccceEEEEeCCCcEEEEcCCCCCCCCcEEE
Q psy15304 1 MRGVTSEAMVMCASTPDKVEILAPPSAAKPGDLIQ 35 (96)
Q Consensus 1 mrGv~S~gMlL~a~~~~~v~ll~p~~~~~~G~rv~ 35 (96)
|||++||||||||++++.+.+|.|+.++++|++|.
T Consensus 688 ~~g~~S~gM~~~~~~~~~i~~l~~~~~~~~G~~~~ 722 (722)
T 1rqg_A 688 LRGIGSQGMLLAADDGERVALLMPDKEVKLGAKVR 722 (722)
T ss_dssp -----------------------------------
T ss_pred eCCcccCeEEEEeeCCCcEEEeCCCCCCCCCCCCC
Confidence 79999999999997666799999988999999874
No 15
>3bu2_A Putative tRNA-binding protein; structural genomics, PSI-2, protein structure initiative; 2.70A {Staphylococcus saprophyticus subsp}
Probab=97.65 E-value=3.5e-06 Score=61.06 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=25.2
Q ss_pred CCcccccceEEEEeC----C--CcEEEEcCCCCCCCCcEE
Q psy15304 1 MRGVTSEAMVMCAST----P--DKVEILAPPSAAKPGDLI 34 (96)
Q Consensus 1 mrGv~S~gMlL~a~~----~--~~v~ll~p~~~~~~G~rv 34 (96)
|||++|||||++++. + ++..++..|+++++|+++
T Consensus 157 lrGv~S~GMlcSa~ELGl~~~~~~~gI~~l~~~~~~G~~v 196 (199)
T 3bu2_A 157 LRGVASSGMICSMKELGLPNAPQEKGIMVLSDDYTVGQSF 196 (199)
T ss_dssp ETTEEEESEECCTTTTTCSSCBSCCSCCEECTTSCTTSBS
T ss_pred EcCceeccEEeehhhcCCCcccCCCeEEECCCCCCCCCcc
Confidence 699999999988863 2 233444557789999987
No 16
>1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B*
Probab=95.76 E-value=0.0012 Score=55.68 Aligned_cols=34 Identities=26% Similarity=0.378 Sum_probs=25.1
Q ss_pred CCcccccceEEEEeC----CCcEEEEcCCCCC-CCCcEE
Q psy15304 1 MRGVTSEAMVMCAST----PDKVEILAPPSAA-KPGDLI 34 (96)
Q Consensus 1 mrGv~S~gMlL~a~~----~~~v~ll~p~~~~-~~G~rv 34 (96)
|||++|||||++++. +++..++..|+++ ++|+++
T Consensus 108 lrGv~S~GMlcs~~eLgl~~~~~gi~~l~~~~~~~G~~~ 146 (785)
T 1b7y_B 108 IQGVRSFGMALSPRELGVGEYGGGLLEFPEDALPPGTPL 146 (785)
T ss_dssp CSSSEECSEECCHHHHTSCSCCSSCCCBCTTSSCTTCBG
T ss_pred eccccccceeeeHHHhCCCCCCCceEECccccccCCCcH
Confidence 799999999977742 2333456667778 899988
No 17
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B*
Probab=95.11 E-value=0.0018 Score=54.51 Aligned_cols=34 Identities=26% Similarity=0.459 Sum_probs=24.4
Q ss_pred CCcccccceEEEEeC----CC------cEEEEcCCCCCCCCcEE
Q psy15304 1 MRGVTSEAMVMCAST----PD------KVEILAPPSAAKPGDLI 34 (96)
Q Consensus 1 mrGv~S~gMlL~a~~----~~------~v~ll~p~~~~~~G~rv 34 (96)
|||++|+|||+++.. ++ .--++..|+++++|+.+
T Consensus 106 lrG~~S~GMlcs~~elGl~~~~~~~~~~~gi~~l~~~~~~G~~~ 149 (795)
T 2rhq_B 106 LRGERSEGMICSLQEIGISSNVVPKAYENGIFVFPTEVEPGTDA 149 (795)
T ss_dssp ETTEEECSEECCSGGGTCCGGGSCHHHHTSCCBCSSCCCTTSBH
T ss_pred ecCccccceeeeHHHcCCCcccccccCCCeEEECCCCCcCCCch
Confidence 699999999987752 22 12345557788999877
No 18
>3pco_B Phenylalanyl-tRNA synthetase, beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli}
Probab=94.94 E-value=0.0031 Score=53.15 Aligned_cols=34 Identities=35% Similarity=0.444 Sum_probs=22.6
Q ss_pred CCcccccceEEEEeC----CCcEEEEcCCCCCCCCcEE
Q psy15304 1 MRGVTSEAMVMCAST----PDKVEILAPPSAAKPGDLI 34 (96)
Q Consensus 1 mrGv~S~gMlL~a~~----~~~v~ll~p~~~~~~G~rv 34 (96)
|||++|+|||+++.. +++--++..|+++++|+.+
T Consensus 110 ~rG~~S~GMlcs~~elgl~~~~~gi~~l~~~~~~G~~~ 147 (795)
T 3pco_B 110 LRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDI 147 (795)
T ss_dssp SSSSEESSEECCSGGGTSCCCCSSCCEECSSCCTTSBH
T ss_pred cCCeecCcEecchhhcCCCCCCCeEEECCccccCCCCH
Confidence 799999999766652 2221233335678999876
No 19
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=37.26 E-value=22 Score=24.36 Aligned_cols=49 Identities=16% Similarity=0.281 Sum_probs=34.2
Q ss_pred cEEEEcCCCCCCCCc---EEEecCCCCCCCCCCCccchhhhhhCC-CcEECCCeeEEECC
Q psy15304 18 KVEILAPPSAAKPGD---LIQVEGYTRNPDPVLNPKKKIFETVAP-DLKTNDSNQATYKG 73 (96)
Q Consensus 18 ~v~ll~p~~~~~~G~---rv~~~g~~~~p~~~l~~Kkk~we~v~~-~l~t~~~g~a~~~~ 73 (96)
++.++.+|.....|. +|.|++..+.+.-. ++.--| +|++++||.+.-+-
T Consensus 39 ~~~~~~vp~~l~~g~~lgkV~F~dC~g~~~~~-------~~ssDp~dFkV~~DGtVya~r 91 (159)
T 1op4_A 39 DVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQ-------YESSEPADFKVDEDGTVYAVR 91 (159)
T ss_dssp CEEEECCCCSSCSSCCEEECCCBCCSSCCCEE-------EECCCSSEEEEETTTEEEEES
T ss_pred ceeEEeccccccCCceeceeecccCCCCCcee-------EEcCCCCCeEEeCCCcEEEec
Confidence 455888888899999 66778776554322 344347 99999999876544
No 20
>1eci_A Ectatomin; pore-forming toxins, ANT venoms; NMR {Ectatomma tuberculatum} SCOP: a.33.1.1
Probab=35.86 E-value=3.8 Score=21.54 Aligned_cols=12 Identities=58% Similarity=0.960 Sum_probs=9.5
Q ss_pred chhhhhhCCCcE
Q psy15304 51 KKIFETVAPDLK 62 (96)
Q Consensus 51 kk~we~v~~~l~ 62 (96)
||+||.|.|-+.
T Consensus 5 kkiweticpt~~ 16 (37)
T 1eci_A 5 KKIWETVCPTVE 16 (37)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhCcchH
Confidence 689999987653
No 21
>4afm_A Endoglucanase CEL5A; hydrolase, carbohydrate binding module, family 5 glycoside H; HET: MSE; 1.25A {Eubacterium cellulosolvens}
Probab=27.45 E-value=21 Score=23.44 Aligned_cols=22 Identities=18% Similarity=0.427 Sum_probs=17.6
Q ss_pred cchhhhhhCCCcEECCCeeEEECC
Q psy15304 50 KKKIFETVAPDLKTNDSNQATYKG 73 (96)
Q Consensus 50 Kkk~we~v~~~l~t~~~g~a~~~~ 73 (96)
|..+|.+|.|...++ |.|+|-.
T Consensus 68 kp~iwaqispyyvvd--gtavftk 89 (134)
T 4afm_A 68 KPQIWAQISPYYVVD--GTAVFTK 89 (134)
T ss_dssp BCCEEEEECCSEEET--TEEEEEH
T ss_pred cccceeeecceEEEc--ceEEecH
Confidence 667899999999984 7888753
No 22
>1ok0_A Tendamistat, alpha-amylase inhibitor HOE-467A; 0.93A {Streptomyces tendae} SCOP: b.5.1.1 PDB: 1bvn_T 1hoe_A 2ait_A 3ait_A 4ait_A
Probab=20.57 E-value=48 Score=20.03 Aligned_cols=15 Identities=33% Similarity=0.818 Sum_probs=11.6
Q ss_pred CCCCcEEEe-cCCCCC
Q psy15304 28 AKPGDLIQV-EGYTRN 42 (96)
Q Consensus 28 ~~~G~rv~~-~g~~~~ 42 (96)
++||+++.| +||-++
T Consensus 48 ~~PG~~~Tfg~gy~g~ 63 (74)
T 1ok0_A 48 VAPGQITTVGDGYIGS 63 (74)
T ss_dssp ECTTCEEEEEECTTST
T ss_pred eCCCceEEeccccccc
Confidence 478999999 677653
No 23
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=20.51 E-value=69 Score=21.37 Aligned_cols=18 Identities=17% Similarity=0.146 Sum_probs=14.8
Q ss_pred EcCCCCCCCCcEEEecCC
Q psy15304 22 LAPPSAAKPGDLIQVEGY 39 (96)
Q Consensus 22 l~p~~~~~~G~rv~~~g~ 39 (96)
+..|.++..|++++|.|.
T Consensus 40 V~Ip~G~~~G~~ir~~g~ 57 (170)
T 1c3g_A 40 IQLKPGWKAGTKITYKNQ 57 (170)
T ss_dssp EECCTTCCTTCEEEESSC
T ss_pred EEeCCCccCCCEEEEecc
Confidence 456678999999999875
Done!