RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15307
(499 letters)
>d1bf5a2 b.2.5.5 (A:317-568) STAT-1, DNA-binding domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 252
Score = 255 bits (652), Expect = 7e-83
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 21/227 (9%)
Query: 138 SVKAQIICESQANALLKNEKIGKSDASGEILNNMGVMEY-NTHSKVLSISLRNMQLKKIK 196
++K +++ + N +N G + + VM + + L+ R++QLK+ K
Sbjct: 41 NLKVKVLFDKDVNE--RNTVKGFRK-FNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQK 97
Query: 197 RRPEKRGTES---VMDEKFSLYFSSTFSIGGGELVFQVWTLSLPVVVIVHGNQEPNAHAT 253
R E V +E SL F + G LV + T SLPVVVI + +Q P+ A+
Sbjct: 98 N-AGTRTNEGPLIVTEELHSLSFETQLCQPG--LVIDLETTSLPVVVISNVSQLPSGWAS 154
Query: 254 ITWDNAFAEPGR--SPFVVPDKRPWKMIADVLMMKFESATGRTLDAENLNFLAEKAFRQA 311
I W N R S F+ P W +++VL +F S T R L+ + LN L EK
Sbjct: 155 ILWYNMLVAEPRNLSFFLTPPCARWAQLSEVLSWQFSSVTKRGLNVDQLNMLGEKLLGP- 213
Query: 312 TDIKMAECADYSNMLLNWSQFCKEPLPDRSFTFWDWFYAVMKLTREH 358
+ L+ W++FCKE + D++F FW W ++++L ++H
Sbjct: 214 --------NASPDGLIPWTRFCKENINDKNFPFWLWIESILELIKKH 252
Score = 34.8 bits (80), Expect = 0.018
Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Query: 384 QVKGTFLLRFSDSELGGITIAWKGGPEKRGTVSVMDEKFSLYFSSTFSIGGGELVFQL 441
G+ F +L A E G + V +E SL F + G LV L
Sbjct: 79 STNGSLAAEFRHLQLKEQKNAGTRTNE--GPLIVTEELHSLSFETQLCQPG--LVIDL 132
>d1bg1a2 b.2.5.5 (A:322-575) STAT3b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 254
Score = 250 bits (640), Expect = 5e-81
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 22/228 (9%)
Query: 138 SVKAQIICESQANALLKNEKIGKSDASGEILNNMGVMEY-NTHSKVLSISLRNMQLKKIK 196
+K I +S A L+ + + N VM +++ LS +++ L++ +
Sbjct: 42 KIKVCIDKDSGDVAALRGSR-----KFNILGTNTKVMNMEESNNGSLSAEFKHLTLREQR 96
Query: 197 R----RPEKRGTESVMDEKFSLYFSSTFSIGGGELVFQVWTLSLPVVVIVHGNQEPNAHA 252
R + V +E + F + G L + T SLPVVVI + Q PNA A
Sbjct: 97 CGNGGRANCDASLIVTEELHLITFETEVYHQG--LKIDLETHSLPVVVISNICQMPNAWA 154
Query: 253 TITWDNAFAEPGRSP--FVVPDKRPWKMIADVLMMKFESATGRTLDAENLNFLAEKAFRQ 310
+I W N ++ F P W +A+VL +F S T R L E L LAEK
Sbjct: 155 SILWYNMLTNNPKNVNFFTKPPIGTWDQVAEVLSWQFSSTTKRGLSIEQLTTLAEKLLGP 214
Query: 311 ATDIKMAECADYSNMLLNWSQFCKEPLPDRSFTFWDWFYAVMKLTREH 358
+YS + W++FCKE + + F+FW W ++ L +++
Sbjct: 215 G--------VNYSGCQITWAKFCKENMAGKGFSFWVWLDNIIDLVKKY 254
Score = 42.5 bits (100), Expect = 4e-05
Identities = 13/66 (19%), Positives = 19/66 (28%), Gaps = 3/66 (4%)
Query: 376 KAEEMLASQVKGTFLLRFSDSELGGITIAWKGGPEKRGTVSVMDEKFSLYFSSTFSIGGG 435
K M S G+ F L G ++ V +E + F + G
Sbjct: 71 KVMNMEESN-NGSLSAEFKHLTLREQRCGNGGRANCDASLIVTEELHLITFETEVYHQG- 128
Query: 436 ELVFQL 441
L L
Sbjct: 129 -LKIDL 133
>d1bf5a3 d.93.1.1 (A:569-710) STAT-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 142
Score = 128 bits (323), Expect = 5e-36
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 22/119 (18%)
Query: 1 MLASQVKGTFLLRFSDSEL-GGITIAW-----KGDNTEVFMLQPFTSKDFQIRNLADRIS 54
+L Q GTFLLRFS+S G IT W G + ++P+T K+ D I
Sbjct: 22 LLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIR 81
Query: 55 DL----------PHLVYLYPDKPKDQAFSKYYTPFQDSQ------PMGTNGYVKPVLVT 97
+ L YLYP+ KD AF KYY+ +++ GY+K L++
Sbjct: 82 NYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDGPKGTGYIKTELIS 140
Score = 82.6 bits (204), Expect = 2e-19
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 359 LKNVWTDGHIMGFVRKRKAEEMLASQVKGTFLLRFSDSEL-GGITIAWKGGPEKRGTVSV 417
L +W DG IMGF+ K + +L Q GTFLLRFS+S G IT W + G
Sbjct: 1 LLPLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDF 60
>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 141
Score = 109 bits (275), Expect = 3e-29
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 1 MLASQVKGTFLLRFSD-SELGGITIAWKGDN----TEVFMLQPFTSKDFQIRNLADRISD 55
+L+++ GTFLLRFS+ S+ GG+T W + T++ ++P+T + + A+ I
Sbjct: 22 ILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEPYTKQQLNNMSFAEIIMG 81
Query: 56 ----------LPHLVYLYPDKPKDQAFSKYYTPFQDSQPMGTNGYVKPVLVTHV 99
+ LVYLYPD PK++AF KY P P G P L T
Sbjct: 82 YKIMDATNILVSPLVYLYPDIPKEEAFGKYCRPESQEHPEADPGSAAPYLKTKF 135
Score = 65.7 bits (160), Expect = 2e-13
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 359 LKNVWTDGHIMGFVRKRKAEEMLASQVKGTFLLRFSD-SELGGITIAWKGG 408
+ +W +G+IMGF+ K + +L+++ GTFLLRFS+ S+ GG+T W
Sbjct: 1 ILALWNEGYIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEK 51
>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium
discoideum [TaxId: 44689]}
Length = 131
Score = 83.9 bits (207), Expect = 4e-20
Identities = 23/106 (21%), Positives = 33/106 (31%), Gaps = 17/106 (16%)
Query: 1 MLASQVKGTFLLRFSDSELGGITIAWKG--DNTEV-FMLQPFTSKDFQIRNLADRISDLP 57
L +Q GTF++RFS+ G IA+ G + L + D +S+
Sbjct: 24 ALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTAAAKKTFPDFLSEHS 83
Query: 58 HLVYLYP------------DKPKDQAFSKYYTPFQDSQPMGTNGYV 91
V L KD A + P GY
Sbjct: 84 QFVNLLQWTKDTNGAPRFLKLHKDTALGSFAPKRTAPVP--VGGYE 127
Score = 66.1 bits (161), Expect = 7e-14
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 358 HLKNVWTDGHIMGFVRKRKAEEMLASQVKGTFLLRFSDSELGGITIAWKGGPEK 411
H+ +W +G I G++ +++ + L +Q GTF++RFS+ G IA+ G
Sbjct: 2 HISTLWQEGIIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMP 55
>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4,
SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}
Length = 112
Score = 38.9 bits (90), Expect = 2e-04
Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
Query: 370 GFVRKRKAEEMLASQVKGTFLLRFSDSELGGITIA-WKGGPEKRGTVSVMDEKFSLYFSS 428
G + K AE +L + +GTFLLR S E +++ + + + FS
Sbjct: 16 GVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHD 75
Query: 429 TFSIGGGELVFQLFISMNTSRIGEDIEPLLLVPTPRN 465
+ + L EPLL P R
Sbjct: 76 P-CVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRT 111
Score = 31.9 bits (72), Expect = 0.048
Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Query: 1 MLASQVKGTFLLRFSDSELGGITIAWKGDNTEVFMLQPFTSKDFQI---RNLADRISDLP 57
+L + +GTFLLR S E +++++ + + + +F D+
Sbjct: 26 LLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDIT 85
Query: 58 HLVYLYPDKPKDQAFSKYYT 77
L+ Y D F +
Sbjct: 86 GLLEHYKDPSACMFFEPLLS 105
>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 97
Score = 33.3 bits (76), Expect = 0.011
Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 370 GFVRKRKAEEMLASQVKGTFLLRFSDSELGGITIA-WKGGPEKRGTVSVMDEKFSLYFSS 428
+ + +AE +L + G F++R S S G +I+ + V + ++
Sbjct: 11 EGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTE 70
Query: 429 TFS 431
F
Sbjct: 71 KFP 73
Score = 27.9 bits (62), Expect = 0.88
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 1 MLASQVKGTFLLRFSDSELGGITIA-WKGDNTEVFMLQPFTSKDFQIRNLADRISDLPHL 59
+L + G F++R S S G +I+ D+ + F + T ++ + ++ L L
Sbjct: 21 LLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWT--EKFPSLNKL 78
Query: 60 VYLY 63
V Y
Sbjct: 79 VDYY 82
>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha
subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 111
Score = 32.7 bits (74), Expect = 0.021
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 370 GFVRKRKAEEMLASQVKGTFLLRFSDSELGG--ITIAWKGGPEKRGTVSVMDEKFSLYFS 427
G + + + E L GTFL+R + +++ G KGG K + D K+
Sbjct: 16 GDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDP 75
Query: 428 STF-SIGGGELVFQLFISMNTSRIGEDIEPLLLVPTPR 464
TF S+ EL+ + + + ++ ++ LL P +
Sbjct: 76 LTFNSV--VELI-NHYRNESLAQYNPKLDVKLLYPVSK 110
Score = 25.7 bits (56), Expect = 6.8
Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 1 MLASQVKGTFLLRFSDSELGG-ITIAWKGDNTEVFMLQPFTSKDFQIRNLADRISDLPHL 59
L GTFL+R + +++ G T+ + + + + + + L
Sbjct: 26 KLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSD-PLTFNSVVEL 84
Query: 60 VYLY 63
+ Y
Sbjct: 85 INHY 88
>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens)
[TaxId: 9606]}
Length = 109
Score = 32.4 bits (73), Expect = 0.026
Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 10/105 (9%)
Query: 370 GFVRKRKAEEMLASQVKGTFLLRFSDSELGGITIAWKGGPE-KRGTVSVMDEKFSLYFSS 428
G + +++A +L Q G FL+R S + G ++ ++ + + S
Sbjct: 5 GRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSP 64
Query: 429 TFSIGGGELVFQLFISMNTSRIGEDIE---------PLLLVPTPR 464
G + +E L+ P R
Sbjct: 65 AQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVSR 109
Score = 26.3 bits (57), Expect = 3.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 1 MLASQVKGTFLLRFSDSELGGITIAWKGDN 30
+L Q G FL+R S + G ++ ++
Sbjct: 15 LLQGQRHGVFLVRDSSTSPGDYVLSVSENS 44
>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 32.6 bits (74), Expect = 0.028
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 13/87 (14%)
Query: 358 HLKNVWTDGHIMGFVRKRKAEEMLASQVK--GTFLLRFSDSELGG--ITIAWKGGPEKRG 413
H +W G I + +++ ++ Q G FL+R S G +++ K
Sbjct: 7 HRTQLWFHGRI----SREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKV-KHY 61
Query: 414 TVSVMDEKFSLYFSSTFSIGGGELVFQ 440
+ +E+ LY FS+ G+ F
Sbjct: 62 LILPSEEEGRLY----FSMDDGQTRFT 84
Score = 26.1 bits (57), Expect = 4.6
Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Query: 1 MLASQVKGTFLLRFSDSELGGITI-AWKGDNTEVFMLQPFTSKD---FQIRNLADRISDL 56
V G FL+R S G + + +++ P + F + + R +DL
Sbjct: 27 GQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDL 86
Query: 57 PHLVYLY 63
LV +
Sbjct: 87 LQLVEFH 93
>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 101
Score = 32.3 bits (73), Expect = 0.028
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 370 GFVRKRKAEEMLASQVKGTFLLRFSDSELGGITI 403
G V + AE +L+S + G+FL+R S+S G +I
Sbjct: 10 GPVSRNAAEYLLSSGINGSFLVRESESSPGQRSI 43
Score = 29.6 bits (66), Expect = 0.24
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 1 MLASQVKGTFLLRFSDSELGGITIAWKGDNTEVFMLQPFTSKDFQIRNLADRISDLPHLV 60
+L+S + G+FL+R S+S G +I+ + + S + R + L LV
Sbjct: 20 LLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELV 79
Query: 61 YLY 63
+ +
Sbjct: 80 HHH 82
>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing
protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 32.0 bits (72), Expect = 0.043
Identities = 19/69 (27%), Positives = 29/69 (42%)
Query: 1 MLASQVKGTFLLRFSDSELGGITIAWKGDNTEVFMLQPFTSKDFQIRNLADRISDLPHLV 60
+L SQ G+FL+R S S +G + FM++ F I + L LV
Sbjct: 24 LLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALV 83
Query: 61 YLYPDKPKD 69
+ KP +
Sbjct: 84 TFHQQKPIE 92
Score = 30.0 bits (67), Expect = 0.20
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 370 GFVRKRKAEEMLASQVKGTFLLRFSDSELG 399
G + + AE +L SQ G+FL+R S S +G
Sbjct: 14 GAISREDAENLLESQPLGSFLIRVSHSHVG 43
>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 114
Score = 32.0 bits (72), Expect = 0.043
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 370 GFVRKRKAEEMLASQVK--GTFLLRFSDSELGGITIAWKGGPEKRGTV 415
+ ++ AE L + + G+FL+R S+S G +++ K + V
Sbjct: 17 RTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVV 64
>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10,
GRB10 {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 31.5 bits (71), Expect = 0.054
Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 9/84 (10%)
Query: 358 HLKNVWTDGHIMGFVRKRKAEEMLASQVK--GTFLLRFSDSELGGITIAWKGGPEKRGTV 415
H W G I + ++ ++ Q G FLLR S S + + +
Sbjct: 2 HRTQHWFHGRI----SREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQ 57
Query: 416 SVMDEKFSLYFSSTFSIGGGELVF 439
+ E F FS+ G F
Sbjct: 58 ILPCEDDGQTF---FSLDDGNTKF 78
Score = 29.2 bits (65), Expect = 0.42
Identities = 16/67 (23%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Query: 1 MLASQVKGTFLLRFSDSELGGITIAWKGDNTEVFMLQPFTSKD----FQIRNLADRISDL 56
V G FLLR S S + D F + + + SDL
Sbjct: 22 KQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDL 81
Query: 57 PHLVYLY 63
LV Y
Sbjct: 82 IQLVDFY 88
>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 31.5 bits (71), Expect = 0.059
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 370 GFVRKRKAEEMLASQVKGTFLLRFSDSELGGITI-AWKGGPEKRGTVSVMDEKFSLYFSS 428
G + + +AE +L G FL+R S + G T+ G + + K S+
Sbjct: 9 GKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEV 68
Query: 429 TFS 431
F
Sbjct: 69 YFE 71
Score = 25.4 bits (55), Expect = 8.0
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Query: 1 MLASQVKGTFLLRFSDSELGGITI-AWKGDNTEVFMLQPFTSKDFQIRNLADRISDLPHL 59
+L G FL+R S + G T+ E + + SK + +L L
Sbjct: 19 LLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEV--YFENLMQL 76
Query: 60 VYLY 63
V Y
Sbjct: 77 VEHY 80
>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 31.2 bits (70), Expect = 0.074
Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 370 GFVRKRKAEEMLASQ-VKGTFLLRFSDSELGGITIAWKGGPEKRGTVSVMDEKFSLYFSS 428
G + + E++L + + G++LLR S+S G + E S +
Sbjct: 9 GKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAET 68
Query: 429 TFSIGG 434
+
Sbjct: 69 APGVHK 74
Score = 26.9 bits (59), Expect = 2.0
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 5/68 (7%)
Query: 1 MLASQVKGTFLLRFSDSELGGITIAWKGDNTEVFMLQPFTSKDFQIRNLADRI-----SD 55
+LA+ + G++LLR S+S G + T A +
Sbjct: 20 LLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRK 79
Query: 56 LPHLVYLY 63
+ +L+ +
Sbjct: 80 IKNLISAF 87
>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 141
Score = 31.1 bits (70), Expect = 0.13
Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 360 KNVWTDGHIMGFVRKRKAEEMLASQVKGTFLLRFSDSELGGITIA--WKGGP-----EKR 412
+ + G + + +A+E+L +G ++LR S + G T+A +
Sbjct: 30 RPKYYGREFHGIISREQADELLGGV-EGAYILRESQRQPGCYTLALRFGNQTLNYRLFHD 88
Query: 413 GTVSVMDEKFS 423
G V +++F
Sbjct: 89 GKHFVGEKRFE 99
Score = 26.9 bits (59), Expect = 3.2
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 8 GTFLLRFSDSELGGITIA-WKGDNTEVFMLQP---FTSKDFQIRNLADRISDLPHLVYLY 63
G ++LR S + G T+A G+ T + L + + ++ D ++D L+ LY
Sbjct: 56 GAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRFESIHDLVTD--GLITLY 113
Query: 64 PDKPKDQAFSKYYT 77
+ + SK T
Sbjct: 114 IETKAAEYISKMTT 127
>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 109
Score = 30.4 bits (68), Expect = 0.14
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 370 GFVRKRKAEEMLASQ-VKGTFLLRFSDSELGGITIAWK-GGPEKRGTVSVMDEKFSLYFS 427
+ +AE +L ++ V G+FL R S S G +T++ + G + + + LY
Sbjct: 8 PNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGG 67
Query: 428 STFS 431
F+
Sbjct: 68 EKFA 71
Score = 29.6 bits (66), Expect = 0.30
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 1 MLASQVKGTFLLRFSDSELGGITIAWKGDNTEVFMLQPFTSKDFQIRNLADRISDLPHLV 60
+L V G+FL R S S G +T++ + + + T + + ++ + L LV
Sbjct: 19 LLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYG-GEKFATLAELV 77
Query: 61 YLY 63
Y
Sbjct: 78 QYY 80
>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2,
SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 30.4 bits (68), Expect = 0.15
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 357 EHLKNVWTDGHIMGFVRKRKAEEMLASQVKGTFLLRFSDSELGGITIAWK-GGPEKRGTV 415
+ L+ + G G + +A+E L +GTFL+R S +TI+ K +
Sbjct: 7 KALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRI 66
Query: 416 SVMDEKFSLYFSSTFSIGGGELVF 439
D KF S + F
Sbjct: 67 EYQDGKF--RLDSIICVKSKLKQF 88
>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 30.0 bits (67), Expect = 0.17
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 370 GFVRKRKAEEMLASQVKGTFLLRFSDSE 397
G + ++A + L G FL+R S
Sbjct: 9 GKISGQEAVQQLQPPEDGLFLVRESARH 36
>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 30.0 bits (67), Expect = 0.20
Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 370 GFVRKRKAEEMLASQVK--GTFLLRFSDSELGGITIAWKGGPEKRG 413
+ ++ AE L + G+FL+R S+S G +++ + + +G
Sbjct: 9 KNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQG 54
>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo
sapiens) [TaxId: 9606]}
Length = 104
Score = 29.7 bits (66), Expect = 0.27
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 370 GFVRKRKAEEMLASQVK--GTFLLRFSDSELGGITIAWKGGPEKRG 413
G + ++ AE L S GTFL+R S++ G +++ + + +G
Sbjct: 11 GKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKG 56
>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 29.5 bits (66), Expect = 0.31
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 10/62 (16%)
Query: 370 GFVRKRKAEEMLASQVKGTFLLRFSDSELGGITIAWKGGP--------EKRGTVSVMDEK 421
G + +R+AE +L Q+ G FL+R S + G + + G V D +
Sbjct: 12 GKLSRREAEALL--QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHR 69
Query: 422 FS 423
F
Sbjct: 70 FE 71
Score = 28.4 bits (63), Expect = 0.74
Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 8 GTFLLRFSDSELGGITIAWKGDNTEVFMLQPFTSKDFQIRNLADRISDLPHLVYLY 63
G FL+R S + G + +L + ++ R + HL+ +
Sbjct: 27 GDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKD--HRFESVSHLISYH 80
>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 106
Score = 29.3 bits (65), Expect = 0.31
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 370 GFVRKRKAEEMLASQ--VKGTFLLRFSDSELGGITIAWK 406
G + +R++E +L + +GTFL+R S++ G ++
Sbjct: 10 GKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVS 48
Score = 25.4 bits (55), Expect = 8.2
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 1 MLASQVKGTFLLRFSDSELGGITIAW------KGDNTEVFMLQPFTSKDFQIRNLADRIS 54
+ A +GTFL+R S++ G ++ KG N + + ++ S F I + + +
Sbjct: 22 LNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITS-RTQFN 80
Query: 55 DLPHLVYLY 63
L LV Y
Sbjct: 81 SLQQLVAYY 89
>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 103
Score = 29.2 bits (65), Expect = 0.33
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 370 GFVRKRKAEEMLASQ-VKGTFLLRFSDSELGGITIAWKGGPEKRGTVSVMDEKFSLYFS 427
G + KR+ E +L V G FL+R S+S G + + ++
Sbjct: 8 GCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIE 66
Score = 26.5 bits (58), Expect = 2.8
Identities = 13/72 (18%), Positives = 20/72 (27%), Gaps = 5/72 (6%)
Query: 1 MLASQVKGTFLLRFSDSELGGITIAWKGDNTEVFMLQPFTSK-----DFQIRNLADRISD 55
+L V G FL+R S+S G + + + +
Sbjct: 19 LLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPN 78
Query: 56 LPHLVYLYPDKP 67
L LV Y
Sbjct: 79 LQELVSKYGKPG 90
>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 29.1 bits (65), Expect = 0.37
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 370 GFVRKRKAEEMLASQVK-GTFLLRFSDSELGGITIAWKGGPEKR 412
G + + KAEEML+ Q G FL+R S+S G +++ K G + +
Sbjct: 8 GKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQ 51
>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 28.9 bits (64), Expect = 0.49
Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 370 GFVRKRKAEEMLASQVK--GTFLLRFSDSELGGITI-AWKGGPEKRGTV 415
+ ++ AE L + G+F++R S++ G ++ P + TV
Sbjct: 6 KGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTV 54
>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha
subunit {Cow (Bos taurus) [TaxId: 9913]}
Length = 107
Score = 28.8 bits (64), Expect = 0.53
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 370 GFVRKRKAEEMLASQVKGTFLLRFSD 395
G + KAE +L + GTFL+R S
Sbjct: 14 GSSNRNKAENLLRGKRDGTFLVRESS 39
Score = 28.1 bits (62), Expect = 1.1
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Query: 1 MLASQVKGTFLLRFSDSELGGITIAWKGDNTEVFMLQPFTSKDFQIRNLADRISDLPHLV 60
+L + GTFL+R S S+ G + D + T+ + + S L LV
Sbjct: 24 LLRGKRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELV 82
Query: 61 YLYPDKP 67
Y
Sbjct: 83 LHYQHTS 89
>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 108
Score = 28.9 bits (64), Expect = 0.55
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 370 GFVRKRKAEEMLASQVK-GTFLLRFSDSELGGITIA 404
G + ++AE++L + K G+FL+R S S G ++
Sbjct: 5 GHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLS 40
Score = 25.5 bits (55), Expect = 8.3
Identities = 16/69 (23%), Positives = 22/69 (31%), Gaps = 9/69 (13%)
Query: 8 GTFLLRFSDSELGGITIA-WKGDNTEVFMLQPFTSKDFQIRNLADRI--------SDLPH 58
G+FL+R S S G ++ GD+ IR + L
Sbjct: 23 GSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTD 82
Query: 59 LVYLYPDKP 67
LV Y P
Sbjct: 83 LVEHYKKNP 91
>d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId:
1905]}
Length = 260
Score = 28.4 bits (62), Expect = 1.9
Identities = 14/121 (11%), Positives = 29/121 (23%), Gaps = 9/121 (7%)
Query: 236 LPVVVIVHGNQEPNAHATITWDNAFAEPG--------RSPFVVPDKRPWKMIADVLMMKF 287
VVI G + A G + PD R ++++ + +
Sbjct: 52 FGAVVISPGFTAYQSSIA-WLGPRLASQGFVVFTIDTNTTLDQPDSRGRQLLSALDYLTQ 110
Query: 288 ESATGRTLDAENLNFLAEKAFRQATDIKMAECADYSNMLLNWSQFCKEPLPDRSFTFWDW 347
S+ +DA L + + + + P+
Sbjct: 111 RSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTSLKAAIPLTGWNTDKTWPELRTPTLVV 170
Query: 348 F 348
Sbjct: 171 G 171
>d2fcra_ c.23.5.1 (A:) Flavodoxin {Chondrus crispus [TaxId: 2769]}
Length = 173
Score = 27.7 bits (61), Expect = 2.1
Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 11/92 (11%)
Query: 287 FESATGRTLD-AENLNFLAEKAFRQATDIKMAECAD----YSNMLLNWSQFCKEPLPDRS 341
F ++TG T + A+ + D+ Y + L + +RS
Sbjct: 6 FSTSTGNTTEVADFIGKTLGAKADAPIDVDDVTDPQALKDYDLLFLGAPTWNTGADTERS 65
Query: 342 FTFWDWFYAVMKLTREHLKNVWTDGHIMGFVR 373
T WD F + L V +
Sbjct: 66 GTSWDEFL------YDKLPEVDMKDLPVAIFG 91
>d1hkva1 b.49.2.3 (A:2-45,A:311-447) Diaminopimelate decarboxylase
LysA {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 181
Score = 27.6 bits (61), Expect = 2.4
Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 13/101 (12%)
Query: 111 GGMNSYPSTP----QNMFHPHSPPDHTRDTASVKAQIICESQANALLKNEKIGKSDASGE 166
GGM+ T Q S + CES + ++++ + G+
Sbjct: 71 GGMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCES-GDIIVRDTWVPDDIRPGD 129
Query: 167 ILN--NMG----VM--EYNTHSKVLSISLRNMQLKKIKRRP 199
++ G + YN + +++ + + RR
Sbjct: 130 LVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRE 170
>d1tlla2 c.23.5.2 (A:750-951) Nitric oxide (NO) synthase FMN domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 202
Score = 27.9 bits (61), Expect = 2.5
Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 13/72 (18%)
Query: 287 FESATGRTLD-AENLNFLAEKAFRQATDIKMAECADYSNMLLNWSQFC--------KEPL 337
+ + TG++ A+ L + F+ A D K +Y + L
Sbjct: 10 YATETGKSQAYAKTL----CEIFKHAFDAKAMSMEEYDIVHLEHEALVLVVTSTFGNGDP 65
Query: 338 PDRSFTFWDWFY 349
P+ F
Sbjct: 66 PENGEKFGCALM 77
>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 86
Score = 26.1 bits (57), Expect = 3.6
Identities = 11/66 (16%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 370 GFVRKRKAEEMLASQ---VKGTFLLRFSDSELGGITIAWKGGPE-KRGTVSVMDEKFSLY 425
G + + KA +++ + G F++R S++ G + + + K +S+
Sbjct: 10 GTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQCHV 69
Query: 426 FSSTFS 431
F
Sbjct: 70 QHLWFQ 75
>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 25.5 bits (55), Expect = 7.9
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Query: 355 TREHLKNVWTDGHIMGFVRKRKAEEMLASQVK--GTFLLRFSDS 396
T H K W G I + ++E+++ K G FL+R D+
Sbjct: 23 TTAHEKMPWFHGKI----SREESEQIVLIGSKTNGKFLIRARDN 62
>d1nz8a_ d.58.42.1 (A:) N-utilization substance G protein NusG,
N-terminal domain {Thermus thermophilus [TaxId: 274]}
Length = 119
Score = 25.4 bits (55), Expect = 8.1
Identities = 17/86 (19%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Query: 193 KKIKRRPEKRGTESVMDEKFSLYFSST---FSIGGGELVFQVWTLSLPVVVIVHGNQEPN 249
+K K EKR + +K T + G V P + + +
Sbjct: 15 EKAKANLEKRIKAFGLQDKIFQVLIPTEEVVELREGGKKEVVRKKLFPGYLFIQMDLGDE 74
Query: 250 AHATITWDNAFAEPGRSPFVVPDKRP 275
W+ PG + FV RP
Sbjct: 75 EEPNEAWEVVRGTPGITGFVGAGMRP 100
>d2c42a2 c.36.1.12 (A:786-1232) Pyruvate-ferredoxin oxidoreductase,
PFOR, domains VI {Desulfovibrio africanus [TaxId: 873]}
Length = 447
Score = 26.5 bits (58), Expect = 8.3
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 256 WDNAFAEPGRSPFVVPDKRPWKMIADVLMM 285
+D A G++PF + K P + + LM
Sbjct: 316 YDPRLAAQGKNPFQLDSKAPDGSVEEFLMA 345
>d1uura2 b.2.5.5 (A:360-576) STAT homologue {Dictyostelium
discoideum [TaxId: 44689]}
Length = 217
Score = 26.1 bits (57), Expect = 9.1
Identities = 26/151 (17%), Positives = 40/151 (26%), Gaps = 37/151 (24%)
Query: 213 SLYFSSTFSIGGGELVFQVWTLSLPVVVIVHGNQEPNAHATITWDNAFAEPGRSPFVVPD 272
+L F S P VVI + Q + + +AF
Sbjct: 95 NLKFGVNIRDLDNVTTTVESDASNPFVVITNECQWEGSAGVLLKKDAFDGQ--------L 146
Query: 273 KRPWKMIADVLMMKFESAT-------GRTLDAENLNFLAEKAFRQATDIKMAECADYSNM 325
+ W + L F AT R L + +L ++ F + I +
Sbjct: 147 EITWAQFINTLQRHFLIATKQDPVRPKRPLSSYDLKYIQTHFFGNRSIIHQQDFD----- 201
Query: 326 LLNWSQFCKEPLPDRSFTFWDWFYAVMKLTR 356
FW WF M+ R
Sbjct: 202 -----------------KFWVWFGKSMQTLR 215
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.135 0.415
Gapped
Lambda K H
0.267 0.0447 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,917,661
Number of extensions: 91370
Number of successful extensions: 302
Number of sequences better than 10.0: 1
Number of HSP's gapped: 284
Number of HSP's successfully gapped: 68
Length of query: 499
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 410
Effective length of database: 1,185,626
Effective search space: 486106660
Effective search space used: 486106660
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.7 bits)