Query psy15308
Match_columns 270
No_of_seqs 177 out of 1154
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 17:42:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15308.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15308hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1olm_A SEC14-like protein 2; l 95.8 0.11 3.8E-06 47.3 12.4 87 78-183 281-384 (403)
2 4dzg_A PLIG; lysozyme inhibito 89.5 0.3 1E-05 36.6 3.6 72 78-164 21-95 (114)
3 2d7n_A Filamin-C; beta-sandwic 83.8 3.3 0.00011 29.6 6.4 43 122-164 22-67 (93)
4 4g9s_B Inhibitor of G-type lys 83.5 2.1 7.2E-05 31.5 5.5 74 75-164 16-92 (111)
5 2ee9_A Filamin-B; beta-sandwic 83.3 3.3 0.00011 29.7 6.3 43 122-164 30-75 (95)
6 3cnk_A Filamin-A; FLNA24, X-RA 77.9 9.1 0.00031 26.5 7.0 42 123-164 31-75 (89)
7 2ds4_A Tripartite motif protei 76.9 18 0.00061 25.9 9.4 43 122-164 49-96 (113)
8 2d7m_A Filamin-C; beta-sandwic 76.5 15 0.00052 26.7 8.3 42 123-164 45-89 (115)
9 2dmb_A Filamin-B; beta-sandwic 75.6 17 0.00059 27.0 8.4 43 122-164 43-88 (124)
10 3d33_A Domain of unknown funct 74.4 11 0.00036 27.7 6.7 55 96-164 37-96 (108)
11 2dlg_A Filamin-B; beta-sandwic 74.3 5.2 0.00018 28.9 5.0 43 122-164 31-76 (102)
12 3rgh_A Filamin-A; cell adhesio 74.0 12 0.0004 26.7 6.9 42 123-164 40-84 (100)
13 2dj4_A Filamin-B; beta-sandwic 72.5 9.4 0.00032 27.6 6.1 43 122-164 43-88 (108)
14 2p9r_A Alpha-2-M, alpha-2-macr 72.3 23 0.00077 25.0 11.4 64 95-164 15-85 (102)
15 1v05_A Filamin C; actin-bindin 71.0 12 0.00041 26.3 6.3 42 123-164 38-82 (96)
16 3sd2_A Putative member of DUF3 69.8 22 0.00076 25.7 7.3 68 79-164 20-90 (101)
17 2nqc_A Filamin-C; immunoglobul 69.5 35 0.0012 25.9 9.4 41 123-164 77-118 (138)
18 2ee6_A Filamin-B; beta-sandwic 69.1 28 0.00097 24.8 8.1 41 123-164 43-85 (105)
19 3isy_A Bsupi, intracellular pr 68.2 25 0.00087 26.2 7.7 44 95-140 16-60 (120)
20 1qfh_A Protein (gelation facto 66.7 30 0.001 27.9 8.7 43 121-164 134-179 (212)
21 1jcd_A Major outer membrane li 66.4 22 0.00075 22.5 6.8 45 196-240 4-48 (52)
22 2dia_A Filamin-B; beta-sandwic 65.7 33 0.0011 24.8 7.9 42 123-164 43-87 (113)
23 2d7p_A Filamin-C; beta-sandwic 65.7 13 0.00045 27.2 5.7 42 123-164 42-86 (112)
24 2e9j_A Filamin-B; beta-sandwic 65.0 30 0.001 25.3 7.6 43 122-164 54-99 (119)
25 2w0p_A Filamin-A; alternative 63.0 35 0.0012 23.7 8.1 41 123-164 35-77 (94)
26 3irp_X URO-adherence factor A; 60.7 14 0.00049 33.8 6.1 43 122-164 330-372 (429)
27 2dic_A Filamin-B; beta-sandwic 58.2 28 0.00095 24.9 6.2 41 123-164 43-85 (105)
28 1wlh_A Gelation factor; ABP-12 57.6 55 0.0019 27.9 9.2 42 122-164 234-278 (311)
29 2dmc_A Filamin-B; beta-sandwic 56.8 23 0.00079 26.0 5.7 43 122-164 45-90 (116)
30 2k7p_A Filamin-A; IG-like, ABP 56.4 41 0.0014 26.7 7.6 42 122-164 128-171 (188)
31 3osv_A Flagellar basal-BODY RO 55.2 55 0.0019 24.6 7.8 43 122-164 37-90 (138)
32 2bp3_A Filamin A; structural p 55.0 50 0.0017 22.9 8.3 41 123-164 38-80 (97)
33 2eea_A Filamin-B; beta-sandwic 54.7 57 0.002 23.5 8.9 41 123-164 53-95 (115)
34 3hd7_B Syntaxin-1A; membrane p 54.6 58 0.002 23.6 9.1 21 195-215 20-40 (109)
35 2eec_A Filamin-B; beta-sandwic 52.4 29 0.001 25.8 5.7 42 122-164 52-94 (125)
36 2k9u_A Gamma filamin; cytoskel 50.1 71 0.0024 23.2 9.7 42 122-164 49-92 (119)
37 2k7p_A Filamin-A; IG-like, ABP 49.3 22 0.00075 28.4 4.8 43 122-164 34-79 (188)
38 1gl2_D Syntaxin 8, vesicle tra 48.3 53 0.0018 21.2 6.8 46 195-240 8-53 (65)
39 3c12_A FLGD, flagellar protein 48.1 84 0.0029 23.5 8.7 42 122-163 39-91 (138)
40 4b7l_A Filamin-B; structural p 47.7 45 0.0015 29.4 7.0 80 74-164 245-334 (347)
41 2k7q_A Filamin-A; IG-like, ABP 44.9 90 0.0031 24.6 7.9 42 122-164 128-171 (191)
42 1qfh_A Protein (gelation facto 44.8 90 0.0031 25.0 8.0 43 122-164 44-89 (212)
43 2nps_D Syntaxin-6; vesicle fus 44.3 73 0.0025 21.7 7.0 46 195-240 18-63 (82)
44 4fxk_A Complement C4 beta chai 41.8 1.4E+02 0.0049 28.0 10.1 82 75-163 109-200 (656)
45 2di9_A Filamin-B; beta-sandwic 40.5 1.1E+02 0.0037 22.6 8.8 41 123-164 63-105 (131)
46 1wlh_A Gelation factor; ABP-12 38.2 1E+02 0.0035 26.2 7.8 43 122-164 143-188 (311)
47 2dib_A Filamin-B; beta-sandwic 37.8 28 0.00097 25.7 3.5 43 122-164 57-102 (128)
48 2x5p_A FBA2, fibronectin bindi 36.3 50 0.0017 24.5 4.7 39 122-162 43-81 (121)
49 2k7q_A Filamin-A; IG-like, ABP 36.0 50 0.0017 26.1 5.0 43 122-164 31-76 (191)
50 2d7o_A Filamin-C; beta-sandwic 34.7 72 0.0024 22.9 5.3 41 123-164 43-85 (111)
51 2j3s_A Filamin-A; cytoskeleton 34.4 99 0.0034 26.1 6.9 42 122-164 228-271 (288)
52 1qle_D Cytochrome AA3, ccytoch 32.6 82 0.0028 18.9 4.4 28 229-256 13-40 (43)
53 1sfc_D Protein (SNAP-25B), pro 32.3 1.2E+02 0.0042 20.8 6.9 47 194-240 27-73 (87)
54 3ogl_Q JAZ1 incomplete degron 31.8 12 0.00042 19.0 0.4 10 261-270 9-18 (21)
55 2hr0_A Complement C3 beta chai 30.9 1.8E+02 0.0061 27.5 8.8 63 95-164 119-189 (645)
56 2j3s_A Filamin-A; cytoskeleton 30.1 39 0.0013 28.7 3.6 43 122-164 131-176 (288)
57 2q0z_X Protein Pro2281; SEC63, 29.7 2.2E+02 0.0076 24.5 8.6 103 73-183 218-330 (339)
58 2pn5_A TEP1R, thioester-contai 29.2 5E+02 0.017 26.9 12.6 83 77-164 91-184 (1325)
59 3hrz_A Cobra venom factor; ser 29.2 90 0.0031 29.8 6.3 63 95-164 117-182 (627)
60 1m56_D Cytochrome C oxidase; m 28.9 1.1E+02 0.0037 19.1 4.8 27 231-257 23-49 (51)
61 3swy_A Cyclic nucleotide-gated 28.8 1E+02 0.0035 18.8 6.1 28 196-223 5-32 (46)
62 2di8_A Filamin-B; beta-sandwic 27.7 1.7E+02 0.0057 20.9 7.7 41 123-164 43-85 (111)
63 3gf8_A Putative polysaccharide 26.9 45 0.0015 28.7 3.4 39 122-160 37-80 (296)
64 2w6b_A RHO guanine nucleotide 25.1 1.3E+02 0.0046 18.9 7.1 41 200-240 7-50 (56)
65 3ol0_A De novo designed monome 25.1 21 0.00073 22.1 0.7 15 4-19 12-26 (48)
66 1l4a_D S-SNAP25 fusion protein 25.1 1.6E+02 0.0056 20.2 5.5 46 195-240 29-74 (87)
67 3swf_A CGMP-gated cation chann 24.7 1.6E+02 0.0056 19.8 6.1 31 196-226 7-37 (74)
68 1n7s_D SNAP-25A; neuronal snar 24.6 1.4E+02 0.0049 19.1 7.3 47 194-240 8-54 (66)
69 3erx_A Pseudoazurin; copper pr 24.0 2E+02 0.007 20.9 6.2 19 143-161 60-79 (123)
70 2lsj_B DNA polymerase kappa; R 29.7 16 0.00056 19.4 0.0 9 262-270 6-14 (26)
71 1gd2_E Transcription factor PA 23.3 1.7E+02 0.0057 19.5 5.0 35 194-228 27-61 (70)
72 2k8e_A UPF0339 protein YEGP; p 23.3 2.2E+02 0.0077 21.2 6.3 62 92-164 10-89 (130)
73 2yko_A LINE-1 ORF1P; RNA-bindi 23.0 2.5E+02 0.0084 23.3 7.0 30 196-225 6-35 (233)
74 3l4f_A RHO guanine nucleotide 22.0 1.7E+02 0.0058 18.9 6.9 40 201-240 5-47 (61)
75 2pnv_A Small conductance calci 21.9 1.3E+02 0.0043 18.1 3.7 20 199-218 19-38 (43)
76 1kd8_B GABH BLL, GCN4 acid bas 21.2 1.3E+02 0.0044 17.3 4.5 26 198-223 3-28 (36)
77 3jqw_A COLH protein, collagena 20.0 2.6E+02 0.009 20.4 11.1 69 83-164 35-104 (121)
No 1
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=95.77 E-value=0.11 Score=47.29 Aligned_cols=87 Identities=17% Similarity=0.208 Sum_probs=58.7
Q ss_pred EEEEcCCCceeEEEEcc-CCcEEEEEEEEEEeecCCCccccCCCCceeEEEEE-C----CC---C--CEEEeeeec----
Q psy15308 78 YFHISETERKCFIEEIP-EETQVIINYKTELFDTRTGGYMQSSPGVGMHVQIS-N----PD---S--KIILSRLYS---- 142 (270)
Q Consensus 78 ~f~i~~g~~~Cf~e~v~-~~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~-d----P~---g--~~v~~~~~~---- 142 (270)
++.|.+|+....-..+. +|..+...|.+. +.+|.+.|+ . ++ | ..+....+.
T Consensus 281 ~~~V~~g~~~~v~~~v~~~g~~l~W~f~~~--------------~~DI~F~v~~~~~~~~~~~~~~~~~v~p~~r~~~~~ 346 (403)
T 1olm_A 281 SVQISRGSSHQVEYEILFPGCVLRWQFMSD--------------GADVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHL 346 (403)
T ss_dssp EEEECTTCEEEEEEEECSTTCEEEEEEEES--------------SSCEEEEEEEC----CCCCGGGSEEEEEEEEECTTT
T ss_pred EEEEcCCCEEEEEEEEcCCCCEEEEEEEec--------------CCcEEEEEEEecccccccCCCcceEEeeeeeecCcc
Confidence 48999999999999887 689999999874 125666654 1 11 2 123332221
Q ss_pred --ccceEEEEeeCCccEEEEeecCCCCccccceeEEEEEEEeC
Q psy15308 143 --YEGRISFTSHMPGEHVICLYSNSTKWVGASQLRVHLDIQVG 183 (270)
Q Consensus 143 --~eg~f~f~a~~~G~Y~iCf~n~~~~~~~~~~~~V~f~i~~g 183 (270)
.+| ++.+.++|.|.++|+|+ .+|+.+ ++|.+.+.+.
T Consensus 347 ~~~~G--~~~~~~~G~y~l~fdNs-~S~~~~--k~l~y~v~v~ 384 (403)
T 1olm_A 347 VPEDG--TLTCSDPGIYVLRFDNT-YSFIHA--KKVNFTVEVL 384 (403)
T ss_dssp SCEEE--EEECCSCEEEEEEEECT-TCCCCS--EEEEEEEEEE
T ss_pred ccccC--EEEcCCCeEEEEEEecc-ccceec--eEEEEEEEEe
Confidence 234 46789999999999987 457654 4566666654
No 2
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=89.48 E-value=0.3 Score=36.56 Aligned_cols=72 Identities=7% Similarity=0.031 Sum_probs=50.7
Q ss_pred EEEEcCCCceeEEEEccCCcEEEEEEEEEEeecCCCccccCCCCceeEEEEECCCCCE---EEeeeecccceEEEEeeCC
Q psy15308 78 YFHISETERKCFIEEIPEETQVIINYKTELFDTRTGGYMQSSPGVGMHVQISNPDSKI---ILSRLYSYEGRISFTSHMP 154 (270)
Q Consensus 78 ~f~i~~g~~~Cf~e~v~~~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~dP~g~~---v~~~~~~~eg~f~f~a~~~ 154 (270)
.=.|.+++...+.-.+.+|+.+.+.. -. +..+-+.|.+|+|+. ++..+....+.++-+.+.+
T Consensus 21 ~G~I~g~~~~~Y~~~a~aGQ~l~V~l-s~--------------~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~s 85 (114)
T 4dzg_A 21 XGSFTGYDTIHYTLVAXAGQTMTVXI-GG--------------SSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPAS 85 (114)
T ss_dssp -CCCBTTCCEEEECCC-CCCEEEC-C-EE--------------STTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSC
T ss_pred eEEecCCCceEEEEEecCCCEEEEEe-CC--------------CCcEEEEEECCCCCcccceeccccCCcceEEEEecCC
Confidence 33577888899999999999988776 21 124667899999973 3444334446888899999
Q ss_pred ccEEEEeecC
Q psy15308 155 GEHVICLYSN 164 (270)
Q Consensus 155 G~Y~iCf~n~ 164 (270)
|.|+|=+...
T Consensus 86 G~Y~i~V~~~ 95 (114)
T 4dzg_A 86 GXYLIQVYQM 95 (114)
T ss_dssp C-CEEEEECC
T ss_pred CcEEEEEEec
Confidence 9999999854
No 3
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=83.77 E-value=3.3 Score=29.57 Aligned_cols=43 Identities=12% Similarity=0.203 Sum_probs=30.8
Q ss_pred ceeEEEEECCCCCEEEee-eecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSR-LYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~-~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.++.+.|.+|+|+.+.-. .....| ..+|++++.|.|++++.-+
T Consensus 22 ~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~ 67 (93)
T 2d7n_A 22 GELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYD 67 (93)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEES
T ss_pred CCEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEEC
Confidence 468899999999864321 112334 5678889999999998855
No 4
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=83.52 E-value=2.1 Score=31.49 Aligned_cols=74 Identities=7% Similarity=0.025 Sum_probs=52.3
Q ss_pred eeEEEEEcCCCceeEEEEccCCcEEEEEEEEEEeecCCCccccCCCCceeEEEEECCCCCEEEeee---ecccceEEEEe
Q psy15308 75 YALYFHISETERKCFIEEIPEETQVIINYKTELFDTRTGGYMQSSPGVGMHVQISNPDSKIILSRL---YSYEGRISFTS 151 (270)
Q Consensus 75 ~~l~f~i~~g~~~Cf~e~v~~~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~dP~g~~v~~~~---~~~eg~f~f~a 151 (270)
..+.=.|.+++...+...+.+|+.+.+.... ....+.|..|.+....... .....+++.+.
T Consensus 16 a~v~G~I~g~~~~~Y~~~a~aGQ~l~v~l~s----------------~~~~~~i~~pg~~~~~~~~~~~~~~~~~~~~~L 79 (111)
T 4g9s_B 16 AQYSGEIKGYDYDTYTFYAKKGQKVHVSISN----------------EGADTYLFGPGIDDSVDLSRYSPELDSHGQYSL 79 (111)
T ss_dssp EEEEEEEETTCCEEEEEEECTTCEEEEEESC----------------TTCEEEEECTTCSSCEECSTTCTTCCTTSCEEC
T ss_pred eEEEEEEeCCCceEEEEEecCCCEEEEEEec----------------CCccEEEECCCCccccccccccccCCceEEEEe
Confidence 4456678899999999999999998876521 1245668888776533221 12234678889
Q ss_pred eCCccEEEEeecC
Q psy15308 152 HMPGEHVICLYSN 164 (270)
Q Consensus 152 ~~~G~Y~iCf~n~ 164 (270)
+.+|.|+|=+...
T Consensus 80 P~sG~Y~I~V~~~ 92 (111)
T 4g9s_B 80 PASGKYELRVLQT 92 (111)
T ss_dssp SSSEEEEEEEECC
T ss_pred cCCccEEEEEEec
Confidence 9999999998743
No 5
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.29 E-value=3.3 Score=29.70 Aligned_cols=43 Identities=12% Similarity=0.200 Sum_probs=30.5
Q ss_pred ceeEEEEECCCCCEEEeee-ecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRL-YSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~-~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.++.+.|.+|+|+.+.-.- ....| ..+|++++.|.|++++.-+
T Consensus 30 ~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~ 75 (95)
T 2ee9_A 30 GEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYM 75 (95)
T ss_dssp TSEEEEEECTTSCEECCEEEECSSSCEEEECCCCSSEEEEEEEEES
T ss_pred CCEEEEEECCCCCccccEEEeCCCCeEEEEEEecCCEeEEEEEEEC
Confidence 4689999999997643221 12334 5677889999999998855
No 6
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=77.89 E-value=9.1 Score=26.51 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=27.6
Q ss_pred eeEEEEECCCCCEEE---eeeecccceEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIIL---SRLYSYEGRISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~---~~~~~~eg~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|+|..+. .+.....-..+|++.+.|.|.+.+.-+
T Consensus 31 ~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 75 (89)
T 3cnk_A 31 MLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWG 75 (89)
T ss_dssp CEEEEEECSSSCCSEEEEEEEETTEEEEEEECCSCEEEEEEEEET
T ss_pred cEEEEEECCCCCceeEEEEECCCCEEEEEEEECCCccEEEEEEEC
Confidence 577888899885321 112222335567888999999998754
No 7
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.90 E-value=18 Score=25.93 Aligned_cols=43 Identities=19% Similarity=0.243 Sum_probs=27.4
Q ss_pred ceeEEEEECCCC--CEEE-eeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDS--KIIL-SRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g--~~v~-~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|++ ..+. .-.+...| ..+|++.+.|.|++++.-+
T Consensus 49 ~~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~ 96 (113)
T 2ds4_A 49 DNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIK 96 (113)
T ss_dssp CCEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEES
T ss_pred ceEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEEC
Confidence 467888888876 2211 11223344 4567888999999998754
No 8
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=76.51 E-value=15 Score=26.73 Aligned_cols=42 Identities=24% Similarity=0.318 Sum_probs=29.1
Q ss_pred eeEEEEECCCCCEEEee-eecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSR-LYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~-~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|+|..+..+ .....| ..+|++.+.|.|++.+.-+
T Consensus 45 ~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 89 (115)
T 2d7m_A 45 LLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYG 89 (115)
T ss_dssp CEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEEEES
T ss_pred EEEEEEECCCCCeeeeEEEECCCCEEEEEEEeCCCceEEEEEEEC
Confidence 58888999998643222 122344 4567888999999998754
No 9
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=75.63 E-value=17 Score=27.03 Aligned_cols=43 Identities=21% Similarity=0.281 Sum_probs=29.6
Q ss_pred ceeEEEEECCCCCEEEeee-ecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRL-YSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~-~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|+|..+.-+- +...| ..+|++.+.|.|++.+.-+
T Consensus 43 ~~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~ 88 (124)
T 2dmb_A 43 GKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFG 88 (124)
T ss_dssp CCEEEEEECTTSCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEES
T ss_pred CcEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEEC
Confidence 3688888999886432221 12344 5578899999999998754
No 10
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=74.39 E-value=11 Score=27.74 Aligned_cols=55 Identities=9% Similarity=0.113 Sum_probs=40.4
Q ss_pred CcEEEEEEEEEEeecCCCccccCCCCceeEEEEE-CCCCCEEEeeeeccc--ceEEEEee--CCccEEEEeecC
Q psy15308 96 ETQVIINYKTELFDTRTGGYMQSSPGVGMHVQIS-NPDSKIILSRLYSYE--GRISFTSH--MPGEHVICLYSN 164 (270)
Q Consensus 96 ~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~-dP~g~~v~~~~~~~e--g~f~f~a~--~~G~Y~iCf~n~ 164 (270)
|..+.++|.. +..++.+.|+ |.+|++||++.-... ..+.+... .+|.|.+=+.+.
T Consensus 37 ~~~L~I~F~~--------------~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~ 96 (108)
T 3d33_A 37 GYLLTLKNAS--------------PDRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGT 96 (108)
T ss_dssp TTEEEEEESS--------------CCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEE
T ss_pred CCEEEEEECC--------------cCCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeC
Confidence 5677777732 2347999999 899999999876444 35555554 689999999876
No 11
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=74.26 E-value=5.2 Score=28.94 Aligned_cols=43 Identities=12% Similarity=0.274 Sum_probs=31.0
Q ss_pred ceeEEEEECCCCCEEEeee-ecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRL-YSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~-~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.++.+.|.+|+|..+.-.- ....| ..+|++++.|.|.+.+.-+
T Consensus 31 ~~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~e~G~h~v~V~~~ 76 (102)
T 2dlg_A 31 SDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYR 76 (102)
T ss_dssp GGCEEEEECTTSCEEECEEEECSSSEEEEEBCCCTTCEEEEEEESS
T ss_pred CCEEEEEECCCCCEeeeEEEECCCCEEEEEEEecCCEeEEEEEEEC
Confidence 4688999999997644322 22344 4567889999999998855
No 12
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=74.02 E-value=12 Score=26.74 Aligned_cols=42 Identities=12% Similarity=0.176 Sum_probs=27.9
Q ss_pred eeEEEEECCCCCEEEee-eecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSR-LYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~-~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|+|..+.-+ .+..+| ..+|++...|.|.+.+.-+
T Consensus 40 ~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~~~ 84 (100)
T 3rgh_A 40 ELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYG 84 (100)
T ss_dssp CEEEEEECTTSCBCEEEEEECSSSEEEEEEECCSSEEEEEEEEET
T ss_pred eEEEEEECCCCCEeEEEEEeCCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 58888889988643322 122344 4577888889999887643
No 13
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=72.54 E-value=9.4 Score=27.59 Aligned_cols=43 Identities=12% Similarity=0.258 Sum_probs=29.5
Q ss_pred ceeEEEEECCCCCEEEee-eecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSR-LYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~-~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|+|..+.-+ .....| ..+|++.+.|.|.+.+.-+
T Consensus 43 ~~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 88 (108)
T 2dj4_A 43 APLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYA 88 (108)
T ss_dssp CCEEEEEECSSSCEECCCCEECSSSEEEEEECCSSCEEEEEEEEES
T ss_pred ceEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 368889999999654322 122344 4567888899999998754
No 14
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=72.32 E-value=23 Score=24.97 Aligned_cols=64 Identities=16% Similarity=0.110 Sum_probs=39.5
Q ss_pred CCcEEEEEEEEEEeecCCCccccCCCCceeEEEEECCCCCEEEeeee--cccceE--EEEee---CCccEEEEeecC
Q psy15308 95 EETQVIINYKTELFDTRTGGYMQSSPGVGMHVQISNPDSKIILSRLY--SYEGRI--SFTSH---MPGEHVICLYSN 164 (270)
Q Consensus 95 ~~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~dP~g~~v~~~~~--~~eg~f--~f~a~---~~G~Y~iCf~n~ 164 (270)
.|+++.+..-+. |.. ..+ ..+..+.+.+.||+|+.+..+.. ...|.+ +|..+ ..|.|++.....
T Consensus 15 PGetV~~~~~~~--~~~---~~p-~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~ 85 (102)
T 2p9r_A 15 PGQTVKFRVVSM--DEN---FHP-LNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 85 (102)
T ss_dssp TTCEEEEEEEEE--CGG---GCB-CCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred CCCEEEEEEEEE--CCC---CcC-CCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEEC
Confidence 577777665554 321 111 22334788999999999887533 234544 44442 469999999754
No 15
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=71.03 E-value=12 Score=26.25 Aligned_cols=42 Identities=12% Similarity=0.098 Sum_probs=27.1
Q ss_pred eeEEEEECCCCCEEE-eeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIIL-SRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~-~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|+|..+. .-....+| ..+|++.+.|.|.+.+.-+
T Consensus 38 ~l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 82 (96)
T 1v05_A 38 MMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWG 82 (96)
T ss_dssp CEEEEEECSSSCCSEEEEEECSTTEEEEEEECSSCEEEEEEEEET
T ss_pred cEEEEEECCCCCeeEEEEEeCCCCEEEEEEEeCCCEEEEEEEEEC
Confidence 577788888875321 11122344 4567888899999988754
No 16
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=69.77 E-value=22 Score=25.68 Aligned_cols=68 Identities=19% Similarity=0.246 Sum_probs=46.9
Q ss_pred EEEcCCCceeEEEEccCCcEEEEEEEEEEeecCCCccccCCCCceeEEEEECC-CCCEEEeeeecccceEEEEe--eCCc
Q psy15308 79 FHISETERKCFIEEIPEETQVIINYKTELFDTRTGGYMQSSPGVGMHVQISNP-DSKIILSRLYSYEGRISFTS--HMPG 155 (270)
Q Consensus 79 f~i~~g~~~Cf~e~v~~~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~dP-~g~~v~~~~~~~eg~f~f~a--~~~G 155 (270)
+.+.|-.++|-+.+ | .+.+.|.-. -..+.+.|.|. +|++||+.....-...++.. ..+|
T Consensus 20 I~i~P~~~~~A~I~---n-vlsV~F~~~--------------~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG 81 (101)
T 3sd2_A 20 IPIQPTYEKCAILS---N-ILNVSFGRA--------------KDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKG 81 (101)
T ss_dssp CCCCCSSEEEEEET---T-EEEEEESSC--------------CSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSE
T ss_pred eeecccccccEEEe---C-EEEEEeccC--------------CCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCc
Confidence 34456667888865 5 888888421 23588999986 89999998654444455444 5589
Q ss_pred cEEEEeecC
Q psy15308 156 EHVICLYSN 164 (270)
Q Consensus 156 ~Y~iCf~n~ 164 (270)
+|.+=+...
T Consensus 82 ~Y~IeI~~~ 90 (101)
T 3sd2_A 82 EYTIHIILN 90 (101)
T ss_dssp EEEEEEEET
T ss_pred eEEEEEEeC
Confidence 999988754
No 17
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=69.45 E-value=35 Score=25.94 Aligned_cols=41 Identities=22% Similarity=0.346 Sum_probs=29.2
Q ss_pred eeEEEEECCCCCEEEeeeeccc-ceEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSRLYSYE-GRISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~~~~~e-g~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|++..+.-.+. .+ -..+|++.++|.|.+-+.-+
T Consensus 77 ~l~v~I~gPs~~~~~~~d~-~dGy~V~YtP~~~G~y~I~Vk~~ 118 (138)
T 2nqc_A 77 ALSVTIDGPSKVQLDCREC-PEGHVVTYTPMAPGNYLIAIKYG 118 (138)
T ss_dssp CEEEEEESSSCCEEEEEEE-TTEEEEEEECCSCEEEEEEEEES
T ss_pred cEEEEEECCCCCeeeEEEC-CCcEEEEEEcCCCEEEEEEEEEC
Confidence 5888889999865433322 33 45678889999999998744
No 18
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.07 E-value=28 Score=24.78 Aligned_cols=41 Identities=20% Similarity=0.361 Sum_probs=29.8
Q ss_pred eeEEEEECCCCCEEEeeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|.+..+.- .....| ..+|++...|.|++.+.-+
T Consensus 43 ~l~v~v~~p~~~~v~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (105)
T 2ee6_A 43 GLSIAVEGPSKAEITF-DDHKNGSCGVSYIAQEPGNYEVSIKFN 85 (105)
T ss_dssp CEEEEEESSSCEEEEE-CCCCSSCCCEEEEESSCEEEEEEEEET
T ss_pred cEEEEEECCCCCEEEE-EECCCCEEEEEEEECCCceEEEEEEEC
Confidence 5788888998865422 223344 6788999999999999854
No 19
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=68.20 E-value=25 Score=26.19 Aligned_cols=44 Identities=14% Similarity=0.105 Sum_probs=25.9
Q ss_pred CCcEEEEEEEEEEeecCCCcccc-CCCCceeEEEEECCCCCEEEeee
Q psy15308 95 EETQVIINYKTELFDTRTGGYMQ-SSPGVGMHVQISNPDSKIILSRL 140 (270)
Q Consensus 95 ~~~~i~~~y~v~~~d~~~g~~~~-~~~~~~i~~~V~dP~g~~v~~~~ 140 (270)
+|..+.+.+.+. |+.+....- -+.+...++.|+|++|+.+|.++
T Consensus 16 ~g~~v~~~ltv~--N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS 60 (120)
T 3isy_A 16 EPEQIKFNMSLK--NQSERAIEFQFSTGQKFELVVYDSEHKERYRYS 60 (120)
T ss_dssp CSSCEEEEEEEE--ECSSSCEEEEESSSCCEEEEEECTTCCEEEETT
T ss_pred CCCeEEEEEEEE--cCCCCcEEEEeCCCCEEEEEEECCCCCEEEEcc
Confidence 455666666666 221110000 02245688999999999999654
No 20
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=66.69 E-value=30 Score=27.89 Aligned_cols=43 Identities=19% Similarity=0.239 Sum_probs=31.2
Q ss_pred CceeEEEEECCCCCEEEee-eecccc--eEEEEeeCCccEEEEeecC
Q psy15308 121 GVGMHVQISNPDSKIILSR-LYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 121 ~~~i~~~V~dP~g~~v~~~-~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
...+.+.|.+|+| .+... .....| ..+|++.+.|.|.+++.-+
T Consensus 134 ~~~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~ 179 (212)
T 1qfh_A 134 GDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLN 179 (212)
T ss_dssp CCCEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEET
T ss_pred CCcEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEEC
Confidence 3468999999999 33221 233455 5688999999999999865
No 21
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=66.40 E-value=22 Score=22.47 Aligned_cols=45 Identities=18% Similarity=0.216 Sum_probs=28.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHH
Q psy15308 196 DKLSELQLRVRQLLDQCDQITKEQNYQRYREERFRATSESTNQRV 240 (270)
Q Consensus 196 ~~l~~l~~~l~~L~~~l~~I~~eq~~~r~re~~~r~~~est~~rV 240 (270)
.+++.|...++.|..++..+..+...++.--..-.+-....|.|+
T Consensus 4 aki~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~Rl 48 (52)
T 1jcd_A 4 AKADQASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRA 48 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 356677777777777777777777776654444444445555554
No 22
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=65.69 E-value=33 Score=24.76 Aligned_cols=42 Identities=5% Similarity=0.115 Sum_probs=28.5
Q ss_pred eeEEEEECCCCCEEEee-eecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSR-LYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~-~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|+|..+.-. .+..+| ..+|++.+.|.|++.+.-+
T Consensus 43 ~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 87 (113)
T 2dia_A 43 ALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYG 87 (113)
T ss_dssp CEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEEET
T ss_pred cEEEEEECCCCCEeeEEEEECCCCEEEEEEEeCCCccEEEEEEEC
Confidence 57778888877543322 223444 4578889999999998754
No 23
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=65.67 E-value=13 Score=27.17 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=29.1
Q ss_pred eeEEEEECCCCCEEEeee-ecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSRL-YSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~~-~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|+|..+.-.- ....| ..+|++++.|.|.+.+.-+
T Consensus 42 ~l~v~V~~P~g~~~~~~v~d~~~gty~v~ytP~~~G~h~v~V~~~ 86 (112)
T 2d7p_A 42 VIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFN 86 (112)
T ss_dssp CEEEEEECSSSCBCCCEECSCBTTEEEEEECCSSCEEEEEEEEES
T ss_pred CEEEEEECCCCCeeeeEEEeCCCCeEEEEEEcCCCEeEEEEEEEC
Confidence 688888999987532221 12233 5678889999999998755
No 24
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.04 E-value=30 Score=25.30 Aligned_cols=43 Identities=16% Similarity=0.189 Sum_probs=28.8
Q ss_pred ceeEEEEECCCCCEEEee-eecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSR-LYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~-~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|+|..+.-+ .....| ..+|++.+.|.|++.+.-+
T Consensus 54 ~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 99 (119)
T 2e9j_A 54 GLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYG 99 (119)
T ss_dssp CCEECCEECTTCCCCCEEEEECCSSEEEEEECCCSCSEEEECCEES
T ss_pred CeEEEEEECCCCCEEEEEEEECCCCEEEEEEEeCCCEEEEEEEEEC
Confidence 357888899998643221 122344 4567888899999998754
No 25
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=62.97 E-value=35 Score=23.68 Aligned_cols=41 Identities=17% Similarity=0.375 Sum_probs=28.0
Q ss_pred eeEEEEECCCCCEEEeeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|.+..+.-.+ ...| ..+|++.+.|.|.+.+.-+
T Consensus 35 ~~~v~v~gp~~~~~~v~d-~~dGty~v~Y~p~~~G~y~I~V~~~ 77 (94)
T 2w0p_A 35 GLAIAVEGPSKAEISFED-RKDGSCGVAYVVQEPGDYEVSVKFN 77 (94)
T ss_dssp CEEEEEEESSCCEEEEEE-CTTSCEEEEEECSSCEEEEEEEEET
T ss_pred cEEEEEECCCCCeEEEEE-CCCCEEEEEEEECCCceEEEEEEEC
Confidence 467777888875443222 2344 5678889999999998754
No 26
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=60.72 E-value=14 Score=33.80 Aligned_cols=43 Identities=14% Similarity=0.284 Sum_probs=37.3
Q ss_pred ceeEEEEECCCCCEEEeeeecccceEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRLYSYEGRISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~~~~eg~f~f~a~~~G~Y~iCf~n~ 164 (270)
.++.+.+.+++|.++....-...|.|.|.-..+|.|.+-|..+
T Consensus 330 ~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 330 AGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp TTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred CCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 3588889999999887777778999999999999999999765
No 27
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=58.23 E-value=28 Score=24.88 Aligned_cols=41 Identities=17% Similarity=0.382 Sum_probs=28.3
Q ss_pred eeEEEEECCCCCEEEeeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|.+..+.-.+ ...| ..+|++.+.|.|.+.+.-+
T Consensus 43 ~l~v~v~gp~~~~~~v~d-~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (105)
T 2dic_A 43 GLGITVEGPSESKINCRD-NKDGSCSAEYIPFAPGDYDVNITYG 85 (105)
T ss_dssp CEEEEEESSSCCCCEEEE-CSSSCEEEEECCSSCEEEEEEEEET
T ss_pred ceEEEEECCCCCeEEEEE-CCCCeEEEEEEeCCCeEEEEEEEEC
Confidence 477788888875432222 3444 5678888999999998754
No 28
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=57.55 E-value=55 Score=27.93 Aligned_cols=42 Identities=17% Similarity=0.192 Sum_probs=30.9
Q ss_pred ceeEEEEECCCCCEEEee-eecccce--EEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSR-LYSYEGR--ISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~-~~~~eg~--f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|+| .+... .....|. .+|++.+.|.|.+++.-+
T Consensus 234 ~~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~ 278 (311)
T 1wlh_A 234 DKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLN 278 (311)
T ss_dssp SCEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEET
T ss_pred CcEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEEC
Confidence 358899999999 43322 2334555 688999999999999865
No 29
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=56.80 E-value=23 Score=26.02 Aligned_cols=43 Identities=21% Similarity=0.258 Sum_probs=30.1
Q ss_pred ceeEEEEECCCCCEEEee-eecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSR-LYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~-~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|+|..+--. .....| ..+|++++.|+|.+.+.-+
T Consensus 45 ~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~e~G~h~v~V~~~ 90 (116)
T 2dmc_A 45 SSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKN 90 (116)
T ss_dssp TTBCCEEECTTSCBCCEEEEEETTTEEEEEECCCSCEEEEEECBBS
T ss_pred CCEEEEEECCCCCEEeeEEEeCCCCeEEEEEEeCCCeeEEEEEEEC
Confidence 357888999999742221 112334 5688999999999998855
No 30
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=56.40 E-value=41 Score=26.73 Aligned_cols=42 Identities=24% Similarity=0.419 Sum_probs=30.5
Q ss_pred ceeEEEEECCCCCEEEeeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|.+..+.-. ...+| ..+|++...|.|++++.-+
T Consensus 128 g~l~v~I~gp~~~~~~~~-d~~dGty~v~Y~p~~~G~y~i~V~~~ 171 (188)
T 2k7p_A 128 GGLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKYN 171 (188)
T ss_dssp SCEEEEEECSSCCEEEEE-ECTTSEEEEEEECCSSEEEEEEEEET
T ss_pred CCeEEEEeCCCCCeEEEE-ECCCCEEEEEEEeCCCEEEEEEEEEC
Confidence 357888899988554322 33455 6788899999999999854
No 31
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=55.20 E-value=55 Score=24.58 Aligned_cols=43 Identities=14% Similarity=0.162 Sum_probs=29.2
Q ss_pred ceeEEEEECCCCCEEEeee--ecccceEEEEe---------eCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRL--YSYEGRISFTS---------HMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~--~~~eg~f~f~a---------~~~G~Y~iCf~n~ 164 (270)
..+.+.|+|.+|++|..-. ..+.|.+.|+- -.+|.|++-+.-.
T Consensus 37 ~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~ 90 (138)
T 3osv_A 37 SNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTS 90 (138)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred cEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEEE
Confidence 3688999999999988754 23556444433 2357898887643
No 32
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=55.00 E-value=50 Score=22.95 Aligned_cols=41 Identities=24% Similarity=0.455 Sum_probs=27.6
Q ss_pred eeEEEEECCCCCEEEeeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|.+..+.-. ....| ..+|++.+.|.|.+.+.-+
T Consensus 38 ~l~v~v~~p~~~~~~v~-d~~dGty~v~Y~p~~~G~y~i~V~~~ 80 (97)
T 2bp3_A 38 GLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKYN 80 (97)
T ss_dssp EEEEEEEESSCCEEEEE-ECSSSEEEEEEECSSCEEEEEEEEET
T ss_pred cEEEEEECCCCCEEEEE-ECCCCEEEEEEEeCCCCcEEEEEEEC
Confidence 57777788877544222 22344 5678888999999998744
No 33
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.70 E-value=57 Score=23.51 Aligned_cols=41 Identities=22% Similarity=0.471 Sum_probs=29.0
Q ss_pred eeEEEEECCCCCEEEeeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|++..+. -.+...| ..+|++++.|.|.+.+.-+
T Consensus 53 ~l~v~v~~p~~~~~~-v~d~~dGty~v~Y~p~~~G~y~I~V~~~ 95 (115)
T 2eea_A 53 GLDLAIEGPSKAEIS-CIDNKDGTCTVTYLPTLPGDYSILVKYN 95 (115)
T ss_dssp CEEEEEESSSCCEEC-CBCCSSSEEEEEEECSSCSCEEEEEEES
T ss_pred ceEEEEECCCCceEE-EEECCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 578888899885432 2223445 5678889999999998754
No 34
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=54.64 E-value=58 Score=23.55 Aligned_cols=21 Identities=19% Similarity=0.349 Sum_probs=11.6
Q ss_pred hcchhHHHHHHHHHHHHHHHH
Q psy15308 195 KDKLSELQLRVRQLLDQCDQI 215 (270)
Q Consensus 195 ~~~l~~l~~~l~~L~~~l~~I 215 (270)
.+++..++..+..|++...++
T Consensus 20 ~~eI~~Ie~~I~eL~~iF~dl 40 (109)
T 3hd7_B 20 HSEIIKLENSIRELHDMFMDM 40 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 445666666665555554444
No 35
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.40 E-value=29 Score=25.78 Aligned_cols=42 Identities=21% Similarity=0.350 Sum_probs=28.4
Q ss_pred ceeEEEEECCCCCEEEeeeecccc-eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRLYSYEG-RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~~~~eg-~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|++..+--.+ ..+| ..+|++.+.|.|.+.+.-+
T Consensus 52 ~~l~v~i~gp~~~~~~~~d-~~dGy~V~Y~P~~~G~y~I~V~~~ 94 (125)
T 2eec_A 52 GTLSVTIEGPSKVKMDCQE-TPEGYKVMYTPMAPGNYLISVKYG 94 (125)
T ss_dssp CCEEEEEESSSCCCCEEEE-CSSSEEEEECCSSCEEEEEEEEES
T ss_pred CcEEEEEECCCCCcceeEE-CCCCEEEEEEcCCCeEEEEEEEEC
Confidence 3688888999875432222 2334 5567888999999998744
No 36
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=50.11 E-value=71 Score=23.20 Aligned_cols=42 Identities=19% Similarity=0.353 Sum_probs=28.8
Q ss_pred ceeEEEEECCCCCEEEeeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|.+-.+.- .+..+| ..+|++.+.|.|.+.+.-+
T Consensus 49 ~~l~v~v~~p~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~ 92 (119)
T 2k9u_A 49 GGLSIAVEGPSKAEIAF-EDRKDGSCGVSYVVQEPGDYEVSIKFN 92 (119)
T ss_dssp EEEEEEEESSSCCEEEE-ECCSSSEEEEEEECCSSEEEEEEEEET
T ss_pred CcEEEEEeCCCCCeEEE-EECCCCEEEEEEEECCCceEEEEEEEC
Confidence 35777888888743322 223444 5678899999999998854
No 37
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=49.28 E-value=22 Score=28.36 Aligned_cols=43 Identities=12% Similarity=0.260 Sum_probs=30.9
Q ss_pred ceeEEEEECCCCCEEEeee-ecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRL-YSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~-~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|+|+...-.- ....| ..+|++.+.|.|++.+.-+
T Consensus 34 ~~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~ 79 (188)
T 2k7p_A 34 GEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYD 79 (188)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEET
T ss_pred ceEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEEC
Confidence 3688899999998643221 12345 5678889999999998765
No 38
>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=48.27 E-value=53 Score=21.22 Aligned_cols=46 Identities=15% Similarity=0.158 Sum_probs=37.5
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHH
Q psy15308 195 KDKLSELQLRVRQLLDQCDQITKEQNYQRYREERFRATSESTNQRV 240 (270)
Q Consensus 195 ~~~l~~l~~~l~~L~~~l~~I~~eq~~~r~re~~~r~~~est~~rV 240 (270)
++.++.+...+.++...-..|-.|.+.+-..-++....++++..|+
T Consensus 8 D~~Ld~L~~~v~~lk~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~l 53 (65)
T 1gl2_D 8 DAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKL 53 (65)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678889999999999999999998888877777777777777665
No 39
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=48.07 E-value=84 Score=23.50 Aligned_cols=42 Identities=17% Similarity=0.171 Sum_probs=29.7
Q ss_pred ceeEEEEECCCCCEEEeee--ecccceEEEEe--e-------CCccEEEEeec
Q psy15308 122 VGMHVQISNPDSKIILSRL--YSYEGRISFTS--H-------MPGEHVICLYS 163 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~--~~~eg~f~f~a--~-------~~G~Y~iCf~n 163 (270)
..+.+.|+|.+|++|..-. ..+.|.+.|.- + .+|.|++.+.-
T Consensus 39 ~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a 91 (138)
T 3c12_A 39 GFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQ 91 (138)
T ss_dssp EEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEE
T ss_pred CEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEE
Confidence 4688999999999987754 24455555543 2 35899999863
No 40
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=47.70 E-value=45 Score=29.42 Aligned_cols=80 Identities=8% Similarity=0.151 Sum_probs=49.0
Q ss_pred ceeEEEEEcCCCceeEEEEccC-----CcEEEEEEEEEEeecCCCccccCCCCceeEEEEECCCCCEEEee---eecccc
Q psy15308 74 SYALYFHISETERKCFIEEIPE-----ETQVIINYKTELFDTRTGGYMQSSPGVGMHVQISNPDSKIILSR---LYSYEG 145 (270)
Q Consensus 74 a~~l~f~i~~g~~~Cf~e~v~~-----~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~dP~g~~v~~~---~~~~eg 145 (270)
...+.-..+|..-+|+---+.. |.. ..|.|...+ . ....+.+.|.+|+|..+--. .....|
T Consensus 245 ~~~l~~k~~pskv~a~GpGle~~g~~vg~p--~~F~Vdt~~---A------G~g~l~v~V~~P~G~~~~~~v~~~~~~~g 313 (347)
T 4b7l_A 245 GAPLKPKLNPKKARAYGRGIEPTGNMVKQP--AKFTVDTIS---A------GQGDVMVFVEDPEGNKEEAQVTPDSDKNK 313 (347)
T ss_dssp TCCCCCSCCGGGCEEESGGGSSSCCCTTSC--EEEEEECTT---T------CSCCEEEEEECTTSCEEECEEEESSTTCS
T ss_pred cccccccccccceeEEeccccccCceeCCE--EEEEEEeCC---C------CCCceEEEEECCCCCeecCEEEEEcCCCC
Confidence 4445555667777777665643 333 345554211 1 12468999999999764322 122345
Q ss_pred --eEEEEeeCCccEEEEeecC
Q psy15308 146 --RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 146 --~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+|++++.|.|.+-+.-+
T Consensus 314 ty~v~y~P~~~G~~~I~V~~~ 334 (347)
T 4b7l_A 314 TYSVEYLPKVTGLHKVTVLFA 334 (347)
T ss_dssp EEEEEECCCSSSEEEEEEEET
T ss_pred EEEEEEEECCCEeEEEEEEEC
Confidence 4578889999999988744
No 41
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=44.92 E-value=90 Score=24.57 Aligned_cols=42 Identities=21% Similarity=0.354 Sum_probs=29.6
Q ss_pred ceeEEEEECCCCCEEEeeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|.+..+.- .....| ..+|++.+.|.|.+++.-+
T Consensus 128 g~l~v~V~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~i~V~~~ 171 (191)
T 2k7q_A 128 GGLSLSIEGPSKVDINT-EDLEDGTCRVTYCPTEPGNYIINIKFA 171 (191)
T ss_dssp EEEEEEEEESSCEEEEE-EECTTSCEEEEEEESSCEEEEEEEEET
T ss_pred CceEEEEECCCCceEEE-EECCCCEEEEEEEeCCCceEEEEEEEC
Confidence 35778888888754322 223445 6788999999999999854
No 42
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=44.78 E-value=90 Score=24.96 Aligned_cols=43 Identities=14% Similarity=0.313 Sum_probs=29.1
Q ss_pred ceeEEEEECCCCCEEEeee-ecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRL-YSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~-~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|+|..+.-.- ....| ..+|++.+.|.|++-+.-+
T Consensus 44 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~ 89 (212)
T 1qfh_A 44 DPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLR 89 (212)
T ss_dssp CCEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEET
T ss_pred CeEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEEC
Confidence 4688889999986433221 22344 4567888899999988754
No 43
>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens}
Probab=44.26 E-value=73 Score=21.68 Aligned_cols=46 Identities=24% Similarity=0.226 Sum_probs=35.9
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHH
Q psy15308 195 KDKLSELQLRVRQLLDQCDQITKEQNYQRYREERFRATSESTNQRV 240 (270)
Q Consensus 195 ~~~l~~l~~~l~~L~~~l~~I~~eq~~~r~re~~~r~~~est~~rV 240 (270)
++.++.+...+.++...-..|-.|.+..-.--++....++++..|+
T Consensus 18 D~~Ld~L~~~v~~LK~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~L 63 (82)
T 2nps_D 18 DEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRL 63 (82)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999998888887766666666666666654
No 44
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=41.76 E-value=1.4e+02 Score=27.96 Aligned_cols=82 Identities=12% Similarity=0.083 Sum_probs=49.3
Q ss_pred eeEEEEEcCCCceeEEEE---c-cCCcEEEEEEEEEEeecCCCccccCCCCceeEEEEECCCCCEEEeeeec-ccceEEE
Q psy15308 75 YALYFHISETERKCFIEE---I-PEETQVIINYKTELFDTRTGGYMQSSPGVGMHVQISNPDSKIILSRLYS-YEGRISF 149 (270)
Q Consensus 75 ~~l~f~i~~g~~~Cf~e~---v-~~~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~dP~g~~v~~~~~~-~eg~f~f 149 (270)
....+.+....--.|.+. + .+|+++.+..-+ .|.+ .. +.+..+.+.|.||+|+.+..+... ..|-|+.
T Consensus 109 ~~~~v~~~~~~~~vFIqTDr~iYrPGqtV~~r~i~--~d~~---~~--p~~~~~~v~i~dp~g~~v~~~~~~~~~G~~~~ 181 (656)
T 4fxk_A 109 QGINLLFSSRRGHLFLQTDQPIYNPGQRVRYRVFA--LDQK---MR--PSTDTITVMVENSHGLRVRKKEVYMPSSIFQD 181 (656)
T ss_dssp EEEEEEECCCCSEEEEEESCSEECTTCEEEEEEEE--ECSS---SS--BCCCCEEEEEECTTCCEEEEEEECCTTSEEEE
T ss_pred eeeEEEEeccCccEEEECCCCCcCCCCEEEEEEEE--ECCc---cC--cCcccceEEEECCCCcEEeeeEEecCCceEEE
Confidence 444556666555566431 1 357887755444 3421 11 223468899999999998776532 3454443
Q ss_pred --Eee---CCccEEEEeec
Q psy15308 150 --TSH---MPGEHVICLYS 163 (270)
Q Consensus 150 --~a~---~~G~Y~iCf~n 163 (270)
..+ ..|.|++-+..
T Consensus 182 ~f~Lp~~~~~G~w~i~v~~ 200 (656)
T 4fxk_A 182 DFVIPDISEPGTWKISARF 200 (656)
T ss_dssp EEECCTTCCSEEEEEEEEE
T ss_pred EecCCCCCCCcCEEEEEEE
Confidence 332 45999999874
No 45
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=40.51 E-value=1.1e+02 Score=22.62 Aligned_cols=41 Identities=20% Similarity=0.372 Sum_probs=28.3
Q ss_pred eeEEEEECCCCCEEEeeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|.+..+.-. +..+| ..+|++.+.|.|.+.+.-+
T Consensus 63 ~l~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~ 105 (131)
T 2di9_A 63 GLGLTVEGPCEAKIECS-DNGDGTCSVSYLPTKPGEYFVNILFE 105 (131)
T ss_dssp CEEEEECSSSCCEEEEE-ECSSSEEEEEEECSSSSEEEEEEEES
T ss_pred eeEEEEEecCCceEEEE-ECCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 57777888887543222 23345 5578889999999998754
No 46
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=38.17 E-value=1e+02 Score=26.16 Aligned_cols=43 Identities=14% Similarity=0.289 Sum_probs=30.0
Q ss_pred ceeEEEEECCCCCEEEee-eecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSR-LYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~-~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|+|..+... .....| ..+|++.+.|.|++++.-+
T Consensus 143 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~ 188 (311)
T 1wlh_A 143 DPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLR 188 (311)
T ss_dssp CCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEET
T ss_pred CcEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEEC
Confidence 468899999998632211 122344 5678889999999999855
No 47
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=37.80 E-value=28 Score=25.69 Aligned_cols=43 Identities=19% Similarity=0.283 Sum_probs=29.0
Q ss_pred ceeEEEEECCCCCEEEee-eecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSR-LYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~-~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|+|..+.-+ .....| ..+|++.+.|.|++.+.-+
T Consensus 57 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~~~i~V~~~ 102 (128)
T 2dib_A 57 DHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYD 102 (128)
T ss_dssp SCCCEECCCSSSCCCCCEEEECSSSEEEEEECCSSCSEEEEEEBSS
T ss_pred ccEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCEeEEEEEEEC
Confidence 357788899988642221 122344 4567889999999999855
No 48
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=36.32 E-value=50 Score=24.47 Aligned_cols=39 Identities=18% Similarity=0.324 Sum_probs=31.6
Q ss_pred ceeEEEEECCCCCEEEeeeecccceEEEEeeCCccEEEEee
Q psy15308 122 VGMHVQISNPDSKIILSRLYSYEGRISFTSHMPGEHVICLY 162 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~~~~eg~f~f~a~~~G~Y~iCf~ 162 (270)
.+..|.+++.+|+.+..+. +.|.+.+.--..|.|.+.=.
T Consensus 43 ~GA~F~l~~~~g~~v~~~~--sdG~~~~~~L~~G~Y~l~Et 81 (121)
T 2x5p_A 43 AGATMELRDSSGKTISTWI--SDGQVKDFYLMPGKYTFVET 81 (121)
T ss_dssp CCCEEEEECTTSCEEEEEE--CCSSCEEEEECSEEEEEEEE
T ss_pred CCCEEEEEECCCCEEEEEE--eCCEEEEcccCCcEEEEEEE
Confidence 3577889999999875543 57888888888999999865
No 49
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=35.99 E-value=50 Score=26.14 Aligned_cols=43 Identities=23% Similarity=0.314 Sum_probs=31.0
Q ss_pred ceeEEEEECCCCCEEEeee-ecccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRL-YSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~-~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|+|+.+.-.- ...+| ..+|++++.|.|.+-+..+
T Consensus 31 ~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~ 76 (191)
T 2k7q_A 31 SLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKN 76 (191)
T ss_dssp SSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEET
T ss_pred CcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEEC
Confidence 3689999999998643322 23344 4578899999999888765
No 50
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=34.74 E-value=72 Score=22.90 Aligned_cols=41 Identities=20% Similarity=0.407 Sum_probs=27.3
Q ss_pred eeEEEEECCCCCEEEeeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|.+..+.- .+...| ..+|++.+.|.|.+.+.-+
T Consensus 43 ~l~v~v~gp~~~~~~v-~d~~dGty~V~Y~p~~~G~y~I~V~~~ 85 (111)
T 2d7o_A 43 GLSLAVEGPSKAEITC-KDNKDGTCTVSYLPTAPGDYSIIVRFD 85 (111)
T ss_dssp CBCCEEESSSCCCBCC-CCCSSSEEEEEECCSSCEEEEEECBBS
T ss_pred cEEEEEECCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEEC
Confidence 4667778887643311 223445 4578889999999998754
No 51
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=34.44 E-value=99 Score=26.10 Aligned_cols=42 Identities=17% Similarity=0.331 Sum_probs=28.7
Q ss_pred ceeEEEEECCCCCEEEeeeecccce--EEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRLYSYEGR--ISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~~~~eg~--f~f~a~~~G~Y~iCf~n~ 164 (270)
..+.+.|.+|.+..+.- .+...|. .+|++.+.|.|.+++.-+
T Consensus 228 g~l~v~v~gp~~~~~~~-~d~~dGt~~v~y~p~~~G~y~i~V~~~ 271 (288)
T 2j3s_A 228 GGLAIAVEGPSKAEISF-EDRKDGSCGVAYVVQEPGDYEVSVKFN 271 (288)
T ss_dssp EEEEEEEEESSCEEEEE-EECTTSEEEEEEEESSCEEEEEEEEET
T ss_pred CceEEEEeCCCCcceeE-EECCCCEEEEEEEcCCCeeEEEEEEEC
Confidence 35778888887644322 2334554 578889999999998744
No 52
>1qle_D Cytochrome AA3, ccytochrome C oxidase; oxidoreductase/immune system, complex (oxidoreductase/antibody), electron transport; HET: HEA PC1; 3.0A {Paracoccus denitrificans} SCOP: f.23.8.1
Probab=32.59 E-value=82 Score=18.90 Aligned_cols=28 Identities=21% Similarity=0.341 Sum_probs=16.5
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHHHHHhh
Q psy15308 229 FRATSESTNQRVFWWSLAQLGILVCMGV 256 (270)
Q Consensus 229 ~r~~~est~~rV~~~silqi~vli~~s~ 256 (270)
|.++-+.--+-+.|-+++-+++++.+++
T Consensus 13 hE~Ty~gFi~~~k~gt~~~~~~ll~mai 40 (43)
T 1qle_D 13 QQATFAGFIKGATWVSILSIAVLVFLAL 40 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444566667777777777665
No 53
>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=32.33 E-value=1.2e+02 Score=20.79 Aligned_cols=47 Identities=15% Similarity=0.226 Sum_probs=38.8
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHH
Q psy15308 194 QKDKLSELQLRVRQLLDQCDQITKEQNYQRYREERFRATSESTNQRV 240 (270)
Q Consensus 194 ~~~~l~~l~~~l~~L~~~l~~I~~eq~~~r~re~~~r~~~est~~rV 240 (270)
.++.++.|...+.+|...-..|-.|.+.+-..-++....++++..|+
T Consensus 27 qD~~Ld~Ls~~v~rLk~la~~ig~Eld~Qn~~Ld~i~~~~D~~~~rl 73 (87)
T 1sfc_D 27 MDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRI 73 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 45678889999999999999999998888887777777777777776
No 54
>3ogl_Q JAZ1 incomplete degron peptide; leucine-rich repeats, ubiquitin ligase, SCF, protein binding; HET: 7JA; 3.18A {Arabidopsis thaliana} PDB: 3ogm_Q*
Probab=31.80 E-value=12 Score=19.00 Aligned_cols=10 Identities=40% Similarity=0.743 Sum_probs=7.1
Q ss_pred HHHHhhcccC
Q psy15308 261 HLKSFFEAKK 270 (270)
Q Consensus 261 ~LKrfF~~KK 270 (270)
.|.||++++|
T Consensus 9 SLqRFleKRk 18 (21)
T 3ogl_Q 9 SLHRFLEKRK 18 (26)
T ss_pred HHHHHHHHhh
Confidence 5677887765
No 55
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=30.86 E-value=1.8e+02 Score=27.53 Aligned_cols=63 Identities=21% Similarity=0.221 Sum_probs=39.8
Q ss_pred CCcEEEEEEEEEEeecCCCccccCCCCceeEEEEECCCCCEEEeeeec---ccceE--EEEee---CCccEEEEeecC
Q psy15308 95 EETQVIINYKTELFDTRTGGYMQSSPGVGMHVQISNPDSKIILSRLYS---YEGRI--SFTSH---MPGEHVICLYSN 164 (270)
Q Consensus 95 ~~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~dP~g~~v~~~~~~---~eg~f--~f~a~---~~G~Y~iCf~n~ 164 (270)
+|+++.+..-+. |. ...+ .+..+.+.|.||+|+.+...... ..|.+ +|..+ ..|.|++-....
T Consensus 119 PGqtV~~r~i~~--d~---~~~p--~~~~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 119 PGSTVLYRIFTV--NH---KLLP--VGRTVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp TTSEEEEEEEEE--CT---TSCB--CCCEEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CCCEEEEEEEEE--CC---CCcc--cCceEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEEC
Confidence 477777555444 42 1112 22468999999999998875433 35644 44443 459999998753
No 56
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=30.10 E-value=39 Score=28.72 Aligned_cols=43 Identities=19% Similarity=0.277 Sum_probs=29.2
Q ss_pred ceeEEEEECCCCCEEEeeee-cccc--eEEEEeeCCccEEEEeecC
Q psy15308 122 VGMHVQISNPDSKIILSRLY-SYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~~-~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.++.+.|.+|+|+.+.-.-. ...| ..+|++.+.|.|++++.-+
T Consensus 131 ~~l~~~V~~psG~~~~~~v~~~~~g~y~v~f~P~e~G~h~v~V~~~ 176 (288)
T 2j3s_A 131 QDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYK 176 (288)
T ss_dssp CCEEEEEECTTCCEEEEBC-------CCCBCCCCSCEEEEEEEEET
T ss_pred CceEEEEECCCCCeeeeEEEeCCCCEEEEEEecccceeeEEEEEEC
Confidence 35788899999987543221 1223 4678889999999998754
No 57
>2q0z_X Protein Pro2281; SEC63, SEC, NESG, HR1979, structural genomics, translocase, northeast structural genomics consortium, PSI-2; 2.00A {Homo sapiens} SCOP: a.289.1.1 b.1.18.22
Probab=29.71 E-value=2.2e+02 Score=24.53 Aligned_cols=103 Identities=17% Similarity=0.279 Sum_probs=57.5
Q ss_pred cceeEEEEEcCCCceeEEEEccCCcEEEEEEEEEEeecCCCccc-----cCCCCceeEEEEECCCCCEEEeeee-----c
Q psy15308 73 FSYALYFHISETERKCFIEEIPEETQVIINYKTELFDTRTGGYM-----QSSPGVGMHVQISNPDSKIILSRLY-----S 142 (270)
Q Consensus 73 ~a~~l~f~i~~g~~~Cf~e~v~~~~~i~~~y~v~~~d~~~g~~~-----~~~~~~~i~~~V~dP~g~~v~~~~~-----~ 142 (270)
+.-.+.+++.+.+ .+..++.+.+...+. ++....+.. +......--+.|.|++++.++.-+. .
T Consensus 218 P~l~v~~~v~~~~------~i~~~~~~~l~v~l~-~~~~~~~~v~aP~fp~~k~e~wwi~v~d~~~~~ll~~~r~~l~~~ 290 (339)
T 2q0z_X 218 PNIELSYEVVDKD------SIRSGGPVVVLVQLE-REEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQK 290 (339)
T ss_dssp CCEEEEEEETTGG------GCBTTSEEEEEEEEE-ECSSCCSSCCCTTCSSCCCCCEEEEEEETTTTEEEEEEEECCSSE
T ss_pred CcEEEEEEEccCc------cccCCCcEEEEEEEE-ECCCCCCceeCCCCCCCCCCcEEEEEEECCCCEEEEEEEEecccc
Confidence 4455666666432 245677666666665 221111111 1112234556778887765444221 2
Q ss_pred ccceEEEEeeCCccEEEEeecCCCCccccceeEEEEEEEeC
Q psy15308 143 YEGRISFTSHMPGEHVICLYSNSTKWVGASQLRVHLDIQVG 183 (270)
Q Consensus 143 ~eg~f~f~a~~~G~Y~iCf~n~~~~~~~~~~~~V~f~i~~g 183 (270)
..-+..|+++.+|.|.+++.--+.+|.+ ......+.+.+.
T Consensus 291 ~~~~l~f~~P~~g~~~~~v~~vSD~ylG-~D~~~~i~~~v~ 330 (339)
T 2q0z_X 291 AKVKLDFVAPATGAHNYTLYFMSDAYMG-CDQEYKFSVDVK 330 (339)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEESSCSS-CCEEEEEEEEEB
T ss_pred eEEEEEEECCCCCCeeEEEEEEcccccC-cceEEEEEEEEe
Confidence 2346889999889888887766667764 345566666654
No 58
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=29.25 E-value=5e+02 Score=26.89 Aligned_cols=83 Identities=16% Similarity=0.126 Sum_probs=49.2
Q ss_pred EEEEEcCCCceeEEEEc----cCCcEEEEEEEEEEeecCCCccccCCCCceeEEEEECCCCCEEEeeeec--ccceE--E
Q psy15308 77 LYFHISETERKCFIEEI----PEETQVIINYKTELFDTRTGGYMQSSPGVGMHVQISNPDSKIILSRLYS--YEGRI--S 148 (270)
Q Consensus 77 l~f~i~~g~~~Cf~e~v----~~~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~dP~g~~v~~~~~~--~eg~f--~ 148 (270)
..+.+.......|.+.= .+|+++.+.--+ .|.+ ..+......+.+.|.||+|+.+..+... ..|.+ +
T Consensus 91 ~~v~~~~~~~~~fi~TDr~iYrPGqtV~~r~~~--~~~~---~~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~ 165 (1325)
T 2pn5_A 91 AELVYLSKSISGLIQVDKPVFKPGDTVNFRVIV--LDTE---LKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESD 165 (1325)
T ss_dssp EEEEECSCSEEEEEEESCSEECTTCEEEEEEEE--EETT---SSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEE
T ss_pred EEEEEEcccccEEEecCCCccCCCCEEEEEEEE--ecCC---ccccccCccEEEEEECCCCCEEEEEecccCCCCeEecc
Confidence 34455555666665432 357877655444 3431 1222222468999999999998877542 34544 3
Q ss_pred EEee---CCccEEEEeecC
Q psy15308 149 FTSH---MPGEHVICLYSN 164 (270)
Q Consensus 149 f~a~---~~G~Y~iCf~n~ 164 (270)
|..+ ..|.|+|=....
T Consensus 166 f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 166 LQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp EECCSSCCCEEEEEEEEET
T ss_pred eECCCCccccceEEEEEeC
Confidence 4443 459999998754
No 59
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=29.22 E-value=90 Score=29.80 Aligned_cols=63 Identities=11% Similarity=0.054 Sum_probs=35.3
Q ss_pred CCcEEEEEEEEEEeecCCCccccCCCCceeEEEEECCCCCEEEeeeecccceEEEEee---CCccEEEEeecC
Q psy15308 95 EETQVIINYKTELFDTRTGGYMQSSPGVGMHVQISNPDSKIILSRLYSYEGRISFTSH---MPGEHVICLYSN 164 (270)
Q Consensus 95 ~~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~dP~g~~v~~~~~~~eg~f~f~a~---~~G~Y~iCf~n~ 164 (270)
+|+.+.+. ++..|.+ .. +.+..+.+.|.||+|+.+..+.....-.++|..+ ..|.|++.....
T Consensus 117 PGqtV~~r--~i~~d~~---~~--p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~ 182 (627)
T 3hrz_A 117 PGSPVLYR--VFSMDHN---TS--KMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 182 (627)
T ss_dssp TTCEECEE--EEESCC------------CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEET
T ss_pred CCCEEEEE--EEEECCC---Cc--ccCccEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEEC
Confidence 46776654 4433421 11 1245688999999999988544332223344433 358999998743
No 60
>1m56_D Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides} SCOP: f.23.8.1 PDB: 1m57_D*
Probab=28.88 E-value=1.1e+02 Score=19.10 Aligned_cols=27 Identities=15% Similarity=0.215 Sum_probs=15.6
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhhH
Q psy15308 231 ATSESTNQRVFWWSLAQLGILVCMGVW 257 (270)
Q Consensus 231 ~~~est~~rV~~~silqi~vli~~s~~ 257 (270)
++-+.--+-+.|.+++-+++++.++++
T Consensus 23 ~Ty~gFi~~~k~gt~~~~~~ll~laif 49 (51)
T 1m56_D 23 KTFAGFVRMVTWAAVVIVAALIFLALA 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444566667777777766653
No 61
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=28.85 E-value=1e+02 Score=18.80 Aligned_cols=28 Identities=18% Similarity=0.266 Sum_probs=15.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15308 196 DKLSELQLRVRQLLDQCDQITKEQNYQR 223 (270)
Q Consensus 196 ~~l~~l~~~l~~L~~~l~~I~~eq~~~r 223 (270)
+.++.++..++.|+.++..+..+..-.+
T Consensus 5 ekv~~Le~~ld~LqTr~ArLlae~~ssq 32 (46)
T 3swy_A 5 EKVEQLGSSLDTLQTRFARLLAEYNATQ 32 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666666666666555544333
No 62
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=27.66 E-value=1.7e+02 Score=20.87 Aligned_cols=41 Identities=17% Similarity=0.370 Sum_probs=27.8
Q ss_pred eeEEEEECCCCCEEEeeeecccc--eEEEEeeCCccEEEEeecC
Q psy15308 123 GMHVQISNPDSKIILSRLYSYEG--RISFTSHMPGEHVICLYSN 164 (270)
Q Consensus 123 ~i~~~V~dP~g~~v~~~~~~~eg--~f~f~a~~~G~Y~iCf~n~ 164 (270)
.+.+.|.+|.+-.+.-. +..+| ..+|++++.|.|.+.+.-+
T Consensus 43 ~l~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (111)
T 2di8_A 43 GISLAVEGPSKVDIQTE-DLEDGTCKVSYFPTVPGVYIVSTKFA 85 (111)
T ss_dssp CEEEEEESSSCCCEECC-BCTTSCEEEEECCCSCSEEEEEEEES
T ss_pred ceEEEEEcCCCceEEEE-ECCCCEEEEEEEeCCCeEEEEEEEEC
Confidence 46777888887443222 23445 5678888999999998744
No 63
>3gf8_A Putative polysaccharide binding proteins (DUF1812; NP_809975.1, joint center for structural genomics; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=26.86 E-value=45 Score=28.70 Aligned_cols=39 Identities=8% Similarity=0.081 Sum_probs=25.1
Q ss_pred ceeEEEEECCCCCEEEeeeecc----cceEEEEee-CCccEEEE
Q psy15308 122 VGMHVQISNPDSKIILSRLYSY----EGRISFTSH-MPGEHVIC 160 (270)
Q Consensus 122 ~~i~~~V~dP~g~~v~~~~~~~----eg~f~f~a~-~~G~Y~iC 160 (270)
..|.+.|+|.+|+.+....... .+.|....+ ..|.|++-
T Consensus 37 ~~V~lyvFD~~G~~v~~~~~~~~~L~~~~y~m~l~Lp~G~Y~~V 80 (296)
T 3gf8_A 37 DKVELYVFDKNGKYLFKQAEEGSALSTGNYLMEVELPVGQYQFM 80 (296)
T ss_dssp CEEEEEEECTTSBEEEEEEEESGGGGSSCCCEEECCCSEEEEEE
T ss_pred CEEEEEEEcCCCCEEEEEecchhhcccCceEEEEecCCCcEEEE
Confidence 3699999999999988754321 233333332 35777764
No 64
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=25.13 E-value=1.3e+02 Score=18.94 Aligned_cols=41 Identities=22% Similarity=0.279 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHhhHH
Q psy15308 200 ELQLRVRQLLDQCDQITKEQNYQR---YREERFRATSESTNQRV 240 (270)
Q Consensus 200 ~l~~~l~~L~~~l~~I~~eq~~~r---~re~~~r~~~est~~rV 240 (270)
.+-+.+-.|.+.+++++++.+.+. +.|.+-|.-.|.+-+|+
T Consensus 7 SlVDtVYaLkDqV~eL~qe~k~m~k~lEeEqkARk~LE~~vrk~ 50 (56)
T 2w6b_A 7 SLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKV 50 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556667777777777666655 55666666777776665
No 65
>3ol0_A De novo designed monomer trefoil-fold SUB-domain forms HOMO-trimer assembly; beta-trefoil, synthetic protein, function-COMP only; 1.48A {Synthetic construct}
Probab=25.12 E-value=21 Score=22.12 Aligned_cols=15 Identities=40% Similarity=0.640 Sum_probs=10.6
Q ss_pred CCCceeEEEecCCChh
Q psy15308 4 SPGVGMHVQISNPDSK 19 (270)
Q Consensus 4 ~~~~~~~~~~~~~~~~ 19 (270)
|-+.|+|.|| +||-+
T Consensus 12 ~~~~Gf~LqI-~PdG~ 26 (48)
T 3ol0_A 12 STETGQYLRI-NPDGT 26 (48)
T ss_dssp ETTTCCEEEE-CTTSB
T ss_pred eccCcEEeEE-CCCCC
Confidence 4567889998 66644
No 66
>1l4a_D S-SNAP25 fusion protein; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=25.08 E-value=1.6e+02 Score=20.20 Aligned_cols=46 Identities=17% Similarity=0.303 Sum_probs=37.4
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHH
Q psy15308 195 KDKLSELQLRVRQLLDQCDQITKEQNYQRYREERFRATSESTNQRV 240 (270)
Q Consensus 195 ~~~l~~l~~~l~~L~~~l~~I~~eq~~~r~re~~~r~~~est~~rV 240 (270)
++.++.+...+.+|...-.+|-.|.+-+-..-++....+++++.|+
T Consensus 29 D~~Ld~ls~~l~rLk~mA~~mg~Eld~Qn~~LD~i~~~~D~~~~rl 74 (87)
T 1l4a_D 29 ENNMKEVSSMIGNLRNMAIDMGNEIGSQNRQVDRIQQKAESNESRI 74 (87)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888888888888888888888888877777777777777765
No 67
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=24.74 E-value=1.6e+02 Score=19.81 Aligned_cols=31 Identities=16% Similarity=0.211 Sum_probs=19.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15308 196 DKLSELQLRVRQLLDQCDQITKEQNYQRYRE 226 (270)
Q Consensus 196 ~~l~~l~~~l~~L~~~l~~I~~eq~~~r~re 226 (270)
+.++.++..++.|+.++..+..+..-.+.+-
T Consensus 7 EKv~~LE~sld~LQTrfARLLaEy~ssQ~KL 37 (74)
T 3swf_A 7 EKVTRMESSVDLLQTRFARILAEYESMQQKL 37 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777777777777666544444333
No 68
>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B
Probab=24.65 E-value=1.4e+02 Score=19.09 Aligned_cols=47 Identities=15% Similarity=0.226 Sum_probs=38.2
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHH
Q psy15308 194 QKDKLSELQLRVRQLLDQCDQITKEQNYQRYREERFRATSESTNQRV 240 (270)
Q Consensus 194 ~~~~l~~l~~~l~~L~~~l~~I~~eq~~~r~re~~~r~~~est~~rV 240 (270)
..+.++.+...+.++...-..|-.|.+.+-..-++....++++..++
T Consensus 8 qD~~Ld~L~~~v~~lk~la~~ig~El~~Qn~~Ld~l~~~~d~~~~~l 54 (66)
T 1n7s_D 8 MDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRI 54 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 35678889999999999999999988888877777777777777765
No 69
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=24.01 E-value=2e+02 Score=20.94 Aligned_cols=19 Identities=21% Similarity=0.359 Sum_probs=14.4
Q ss_pred ccceEEEEeeCCccEEE-Ee
Q psy15308 143 YEGRISFTSHMPGEHVI-CL 161 (270)
Q Consensus 143 ~eg~f~f~a~~~G~Y~i-Cf 161 (270)
+...|+++..++|.|.+ |-
T Consensus 60 pg~t~s~TF~~pG~y~y~C~ 79 (123)
T 3erx_A 60 INESYTLTVTEPGLYGVKCT 79 (123)
T ss_dssp TTCCEEEEECSCEEEEEECG
T ss_pred CCCEEEEEeCCCeEEEEEeC
Confidence 34567777789999987 65
No 70
>2lsj_B DNA polymerase kappa; REV1, RIR, POL kappa, translesion synthesis, TLS, CTD, prote binding-protein binding complex; HET: DNA; NMR {Mus musculus}
Probab=29.71 E-value=16 Score=19.37 Aligned_cols=9 Identities=56% Similarity=0.944 Sum_probs=6.3
Q ss_pred HHHhhcccC
Q psy15308 262 LKSFFEAKK 270 (270)
Q Consensus 262 LKrfF~~KK 270 (270)
=++||.+||
T Consensus 6 K~SFFdKKR 14 (26)
T 2lsj_B 6 KKSFFDKKR 14 (26)
Confidence 367888775
No 71
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=23.35 E-value=1.7e+02 Score=19.45 Aligned_cols=35 Identities=23% Similarity=0.292 Sum_probs=24.9
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15308 194 QKDKLSELQLRVRQLLDQCDQITKEQNYQRYREER 228 (270)
Q Consensus 194 ~~~~l~~l~~~l~~L~~~l~~I~~eq~~~r~re~~ 228 (270)
++.++..++..+..+......+..+-..++..-..
T Consensus 27 K~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i~~ 61 (70)
T 1gd2_E 27 KEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQ 61 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788888888888888777776666666544333
No 72
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=23.29 E-value=2.2e+02 Score=21.22 Aligned_cols=62 Identities=10% Similarity=0.080 Sum_probs=41.3
Q ss_pred EccCCcEEEEEEEEEEeecCCCccccCCCCceeEEEEECCCCCEEEeeee------------------cccceEEEEeeC
Q psy15308 92 EIPEETQVIINYKTELFDTRTGGYMQSSPGVGMHVQISNPDSKIILSRLY------------------SYEGRISFTSHM 153 (270)
Q Consensus 92 ~v~~~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~dP~g~~v~~~~~------------------~~eg~f~f~a~~ 153 (270)
+..+|....+.|++.. | .+....+.++.+||++|...+. .....|......
T Consensus 10 ~~~~~~~Mag~FEi~~-~----------~~G~~rfrLka~NGeiI~sSe~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~ 78 (130)
T 2k8e_A 10 NFNQGVIMAGWFELSK-S----------SDNQFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTAS 78 (130)
T ss_dssp ----CCCCCCEEEEEE-C----------TTCCEEEEEECTTSCEEEECCCBSSHHHHHHHHHHHHHSSSCTTTEEEEEET
T ss_pred ccCccceeeeeEEEEE-c----------CCCCEEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHHhhccccchheeeecc
Confidence 3456666778888862 2 1235889999999999876531 123468877778
Q ss_pred CccEEEEeecC
Q psy15308 154 PGEHVICLYSN 164 (270)
Q Consensus 154 ~G~Y~iCf~n~ 164 (270)
.|+|.+-+...
T Consensus 79 ~G~~~f~Lka~ 89 (130)
T 2k8e_A 79 NGKFYFNLKAA 89 (130)
T ss_dssp TTEEEEEEECT
T ss_pred CCCEEEEEEeC
Confidence 88888888764
No 73
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=23.03 E-value=2.5e+02 Score=23.33 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=20.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15308 196 DKLSELQLRVRQLLDQCDQITKEQNYQRYR 225 (270)
Q Consensus 196 ~~l~~l~~~l~~L~~~l~~I~~eq~~~r~r 225 (270)
..++++++.+..|++.+.+|.+...-...|
T Consensus 6 sRvd~~EErIs~le~rleei~q~eq~~ekr 35 (233)
T 2yko_A 6 SRCDQLEERVSAAEDEINEIKREGKFREKR 35 (233)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346778888888888888887654443333
No 74
>3l4f_A RHO guanine nucleotide exchange factor 7; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=21.95 E-value=1.7e+02 Score=18.95 Aligned_cols=40 Identities=23% Similarity=0.284 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHhhHH
Q psy15308 201 LQLRVRQLLDQCDQITKEQNYQR---YREERFRATSESTNQRV 240 (270)
Q Consensus 201 l~~~l~~L~~~l~~I~~eq~~~r---~re~~~r~~~est~~rV 240 (270)
+.+.+-.+.+.+.+++++.++++ +.|.+.|...|..-.++
T Consensus 5 LVDtVYalkDev~eLk~e~k~~k~~le~eqraRk~LE~~vrk~ 47 (61)
T 3l4f_A 5 LVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKV 47 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666666777777666655 45555666666555444
No 75
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=21.91 E-value=1.3e+02 Score=18.09 Aligned_cols=20 Identities=10% Similarity=0.260 Sum_probs=14.1
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q psy15308 199 SELQLRVRQLLDQCDQITKE 218 (270)
Q Consensus 199 ~~l~~~l~~L~~~l~~I~~e 218 (270)
+.++.+|..|+.+|..+...
T Consensus 19 e~LE~Ri~~LE~KLd~L~~~ 38 (43)
T 2pnv_A 19 EDFEKRIVTLETKLETLIGS 38 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 56777777777777777654
No 76
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=21.20 E-value=1.3e+02 Score=17.26 Aligned_cols=26 Identities=12% Similarity=0.219 Sum_probs=14.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15308 198 LSELQLRVRQLLDQCDQITKEQNYQR 223 (270)
Q Consensus 198 l~~l~~~l~~L~~~l~~I~~eq~~~r 223 (270)
++++++.+..|...-.++.++...++
T Consensus 3 MnQLE~KVEeLl~~~~~Le~eV~RLk 28 (36)
T 1kd8_B 3 VKQLKAKVEELKSKLWHLKNKVARLK 28 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 45566666666555555555544433
No 77
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} SCOP: b.23.2.0 PDB: 3jqx_A
Probab=20.04 E-value=2.6e+02 Score=20.42 Aligned_cols=69 Identities=14% Similarity=0.138 Sum_probs=48.2
Q ss_pred CCCceeEEEEccCCcEEEEEEEEEEeecCCCccccCCCCceeEEEEECCCCCEEEeeee-cccceEEEEeeCCccEEEEe
Q psy15308 83 ETERKCFIEEIPEETQVIINYKTELFDTRTGGYMQSSPGVGMHVQISNPDSKIILSRLY-SYEGRISFTSHMPGEHVICL 161 (270)
Q Consensus 83 ~g~~~Cf~e~v~~~~~i~~~y~v~~~d~~~g~~~~~~~~~~i~~~V~dP~g~~v~~~~~-~~eg~f~f~a~~~G~Y~iCf 161 (270)
......|..+|++...+.+++.-. .+.++...+++.+++.+..... ...-.-+|.+.++|.|-+.+
T Consensus 35 ~dd~D~y~F~V~~~g~v~I~l~~~-------------~~~~~~w~ly~~~~nyv~y~~~~gn~~~~~~~~~~pGkYYl~V 101 (121)
T 3jqw_A 35 TSDQDYFYFDVITPGEVKIDINKL-------------GYGGATWVVYDENNNAVSYATDDGQNLSGKFKADKPGRYYIHL 101 (121)
T ss_dssp TTCCEEEEEEESSCEEEEEEEEEC-------------SSSEEEEEEECTTSCEEEECEECSSEEEEEEEECSCEEEEEEE
T ss_pred cCCeeEEEEEeCCCCeEEEEEEec-------------CCCcEEEEEEeCCCCeEEEeccCCCEEEEEEEeCCCeeEEEEE
Confidence 466899999999988888877543 1357888888887776554332 11223346676899999999
Q ss_pred ecC
Q psy15308 162 YSN 164 (270)
Q Consensus 162 ~n~ 164 (270)
..-
T Consensus 102 y~y 104 (121)
T 3jqw_A 102 YMF 104 (121)
T ss_dssp EEE
T ss_pred EEe
Confidence 853
Done!