Query psy15309
Match_columns 258
No_of_seqs 280 out of 1441
Neff 6.8
Searched_HMMs 46136
Date Fri Aug 16 17:43:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15309.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15309hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3730|consensus 100.0 4.5E-51 9.7E-56 380.0 18.9 232 14-257 21-255 (685)
2 PTZ00374 dihydroxyacetone phos 100.0 2.6E-46 5.6E-51 374.5 23.2 217 27-257 513-733 (1108)
3 PRK03355 glycerol-3-phosphate 100.0 1.3E-44 2.7E-49 361.7 22.4 195 49-257 175-370 (783)
4 PRK04974 glycerol-3-phosphate 100.0 6.2E-44 1.4E-48 359.2 22.3 195 48-257 210-405 (818)
5 TIGR03703 plsB glycerol-3-phos 100.0 1.6E-43 3.4E-48 356.0 22.0 195 48-257 200-395 (799)
6 COG2937 PlsB Glycerol-3-phosph 100.0 8.4E-44 1.8E-48 344.4 17.5 194 49-257 206-399 (810)
7 PRK11915 glycerol-3-phosphate 100.0 1.9E-42 4.2E-47 337.4 22.4 189 53-257 30-218 (621)
8 KOG3729|consensus 100.0 7.3E-33 1.6E-37 261.3 11.0 245 3-257 10-267 (715)
9 cd07993 LPLAT_DHAPAT-like Lyso 100.0 5.9E-29 1.3E-33 215.2 10.8 124 132-257 1-125 (205)
10 KOG2848|consensus 99.9 1.6E-24 3.5E-29 190.0 11.0 115 133-257 73-187 (276)
11 PRK15018 1-acyl-sn-glycerol-3- 99.9 4.9E-24 1.1E-28 189.7 13.2 131 115-257 33-163 (245)
12 COG0204 PlsC 1-acyl-sn-glycero 99.9 1.4E-21 3.1E-26 171.4 12.3 127 119-257 36-163 (255)
13 PTZ00261 acyltransferase; Prov 99.9 4E-21 8.7E-26 177.5 11.8 107 150-257 127-240 (355)
14 PRK14014 putative acyltransfer 99.8 3.6E-20 7.9E-25 169.5 13.3 133 118-256 57-207 (301)
15 cd07991 LPLAT_LPCAT1-like Lyso 99.8 2.7E-20 5.8E-25 161.6 9.7 111 133-257 9-121 (211)
16 PLN02901 1-acyl-sn-glycerol-3- 99.8 1.3E-19 2.8E-24 157.9 12.8 112 135-257 35-146 (214)
17 cd07992 LPLAT_AAK14816-like Ly 99.8 1.2E-19 2.5E-24 156.6 10.6 120 127-257 8-134 (203)
18 PF01553 Acyltransferase: Acyl 99.8 3.8E-20 8.2E-25 147.2 3.7 113 138-257 3-115 (132)
19 TIGR00530 AGP_acyltrn 1-acyl-s 99.8 9.4E-19 2E-23 138.8 10.5 112 135-257 2-113 (130)
20 PRK08043 bifunctional acyl-[ac 99.8 1.6E-18 3.5E-23 174.2 10.8 111 130-257 11-121 (718)
21 cd07988 LPLAT_ABO13168-like Ly 99.8 3.6E-18 7.9E-23 143.1 9.5 96 151-257 20-116 (163)
22 cd07990 LPLAT_LCLAT1-like Lyso 99.7 7.3E-18 1.6E-22 144.3 8.9 112 133-251 8-122 (193)
23 PRK06814 acylglycerophosphoeth 99.7 1.2E-17 2.6E-22 174.9 11.5 108 136-257 440-547 (1140)
24 PLN02499 glycerol-3-phosphate 99.7 2.2E-17 4.8E-22 158.2 10.9 108 133-257 269-376 (498)
25 PRK08633 2-acyl-glycerophospho 99.7 3.3E-17 7.2E-22 170.8 11.5 109 135-257 427-535 (1146)
26 PLN02510 probable 1-acyl-sn-gl 99.7 9E-17 2E-21 150.8 13.2 114 132-252 76-191 (374)
27 PLN02833 glycerol acyltransfer 99.7 1.1E-16 2.4E-21 150.3 12.9 107 137-257 152-261 (376)
28 cd07986 LPLAT_ACT14924-like Ly 99.7 5.6E-17 1.2E-21 140.8 9.9 111 136-257 9-128 (210)
29 cd07985 LPLAT_GPAT Lysophospho 99.7 6.9E-17 1.5E-21 142.2 9.2 96 149-252 19-137 (235)
30 PLN02380 1-acyl-sn-glycerol-3- 99.7 5.5E-16 1.2E-20 145.6 12.8 118 130-251 62-182 (376)
31 smart00563 PlsC Phosphate acyl 99.6 2.3E-15 5E-20 116.4 10.6 99 154-257 1-99 (118)
32 PLN02588 glycerol-3-phosphate 99.6 9E-16 2E-20 147.1 9.7 107 134-257 310-416 (525)
33 PLN02783 diacylglycerol O-acyl 99.6 1.3E-15 2.8E-20 140.3 10.2 108 133-257 85-201 (315)
34 PLN02177 glycerol-3-phosphate 99.6 1.7E-15 3.8E-20 146.9 9.5 108 133-257 282-389 (497)
35 cd07987 LPLAT_MGAT-like Lysoph 99.6 1.6E-15 3.4E-20 131.4 6.3 102 136-257 9-120 (212)
36 cd06551 LPLAT Lysophospholipid 99.5 1.3E-13 2.8E-18 115.9 10.2 113 134-257 11-126 (187)
37 cd07983 LPLAT_DUF374-like Lyso 99.4 2E-13 4.4E-18 115.9 8.0 111 134-257 7-118 (189)
38 cd07989 LPLAT_AGPAT-like Lysop 99.4 6.3E-12 1.4E-16 105.5 11.4 111 134-257 11-121 (184)
39 KOG1505|consensus 99.0 1.3E-09 2.7E-14 101.7 8.8 92 150-244 69-162 (346)
40 cd07984 LPLAT_LABLAT-like Lyso 98.9 1E-08 2.2E-13 86.6 8.6 94 140-248 7-105 (192)
41 KOG2847|consensus 98.7 3E-08 6.5E-13 87.6 5.3 118 132-257 47-175 (286)
42 PLN02349 glycerol-3-phosphate 98.6 9.2E-07 2E-11 83.0 13.1 97 149-247 198-308 (426)
43 PRK08419 lipid A biosynthesis 96.8 0.026 5.7E-07 51.3 12.9 103 133-252 95-203 (298)
44 PRK07920 lipid A biosynthesis 96.7 0.027 6E-07 51.4 11.7 104 140-252 95-201 (298)
45 COG1560 HtrB Lauroyl/myristoyl 94.9 0.74 1.6E-05 42.6 13.3 98 138-249 108-210 (308)
46 PF03279 Lip_A_acyltrans: Bact 94.6 1.2 2.6E-05 40.2 13.7 94 136-244 104-202 (295)
47 PRK06946 lipid A biosynthesis 92.0 1.8 3.9E-05 39.4 10.5 137 94-252 59-200 (293)
48 COG2121 Uncharacterized protei 90.3 3.9 8.4E-05 35.8 10.2 121 114-245 9-129 (214)
49 PRK06553 lipid A biosynthesis 89.6 2.6 5.7E-05 38.6 9.3 92 138-243 118-214 (308)
50 PRK05906 lipid A biosynthesis 89.5 7 0.00015 38.2 12.5 101 137-253 124-229 (454)
51 PRK06628 lipid A biosynthesis 89.1 2.9 6.3E-05 37.9 9.2 93 134-243 99-195 (290)
52 PRK08943 lipid A biosynthesis 89.0 7.5 0.00016 35.6 11.9 103 134-253 114-222 (314)
53 TIGR02208 lipid_A_msbB lipid A 89.0 5.4 0.00012 36.4 10.9 92 134-242 105-201 (305)
54 PRK08025 lipid A biosynthesis 86.5 5.7 0.00012 36.2 9.5 89 134-241 107-200 (305)
55 PRK08734 lipid A biosynthesis 86.2 9 0.0002 35.0 10.6 89 139-242 99-192 (305)
56 TIGR02207 lipid_A_htrB lipid A 84.8 24 0.00053 32.0 12.7 89 134-241 103-196 (303)
57 PRK06860 lipid A biosynthesis 83.4 6.9 0.00015 35.8 8.5 90 134-242 109-203 (309)
58 PRK08733 lipid A biosynthesis 83.0 17 0.00037 33.2 10.9 89 134-241 109-202 (306)
59 PRK08706 lipid A biosynthesis 81.7 26 0.00056 31.6 11.5 90 134-240 89-184 (289)
60 PRK05645 lipid A biosynthesis 80.4 21 0.00046 32.2 10.5 87 140-242 99-191 (295)
61 PRK04974 glycerol-3-phosphate 80.1 5.7 0.00012 41.6 7.3 65 117-182 5-69 (818)
62 PF04028 DUF374: Domain of unk 79.2 8.3 0.00018 28.1 6.0 49 193-245 23-71 (74)
63 PRK05646 lipid A biosynthesis 77.2 13 0.00029 33.9 8.2 92 133-241 105-201 (310)
64 KOG2898|consensus 75.4 0.85 1.8E-05 43.0 -0.2 92 154-254 139-232 (354)
65 KOG4666|consensus 75.1 2.3 4.9E-05 39.8 2.5 92 153-256 8-101 (412)
66 COG3176 Putative hemolysin [Ge 71.7 18 0.00039 33.3 7.5 100 134-243 65-166 (292)
67 TIGR03703 plsB glycerol-3-phos 63.7 31 0.00067 36.2 8.2 56 126-182 4-59 (799)
68 KOG4321|consensus 62.7 10 0.00022 32.5 3.7 95 129-243 26-122 (279)
69 COG1698 Uncharacterized protei 62.3 35 0.00076 25.9 6.1 61 58-129 21-89 (93)
70 PF05696 DUF826: Protein of un 56.0 32 0.00069 25.2 4.8 42 55-109 9-50 (78)
71 PF10940 DUF2618: Protein of u 53.4 5.1 0.00011 25.3 0.3 19 152-170 12-30 (40)
72 PRK15174 Vi polysaccharide exp 42.4 1.3E+02 0.0029 30.5 8.7 84 145-243 471-555 (656)
73 PF03685 UPF0147: Uncharacteri 42.1 1.3E+02 0.0029 22.6 6.4 61 57-125 13-78 (85)
74 PRK08905 lipid A biosynthesis 41.5 2.6E+02 0.0057 25.1 13.1 88 139-241 87-179 (289)
75 PRK13397 3-deoxy-7-phosphohept 41.3 94 0.002 28.0 6.6 96 140-247 66-164 (250)
76 PF07319 DnaI_N: Primosomal pr 38.5 54 0.0012 24.7 4.0 24 55-78 21-44 (94)
77 PF10777 YlaC: Inner membrane 38.5 9.1 0.0002 31.8 -0.3 48 25-74 83-130 (155)
78 PF12651 RHH_3: Ribbon-helix-h 38.1 99 0.0021 19.9 4.6 30 65-105 10-39 (44)
79 PRK04330 hypothetical protein; 34.3 1.4E+02 0.0031 22.5 5.5 67 57-127 16-83 (88)
80 PRK13396 3-deoxy-7-phosphohept 30.6 1.9E+02 0.0041 27.4 7.0 98 139-247 151-250 (352)
81 PRK13398 3-deoxy-7-phosphohept 28.9 2.9E+02 0.0063 24.9 7.8 99 139-248 77-177 (266)
82 PRK08673 3-deoxy-7-phosphohept 27.2 3.2E+02 0.007 25.6 7.9 98 139-247 143-242 (335)
83 TIGR03569 NeuB_NnaB N-acetylne 27.1 1.6E+02 0.0034 27.5 5.9 90 135-233 71-160 (329)
84 PRK11235 bifunctional antitoxi 24.2 1.3E+02 0.0028 22.2 3.8 28 95-122 10-37 (80)
85 PF12399 BCA_ABC_TP_C: Branche 24.1 62 0.0014 18.2 1.6 12 60-71 9-20 (23)
86 PF04221 RelB: RelB antitoxin; 24.1 1.1E+02 0.0023 22.4 3.4 30 94-123 9-38 (83)
87 TIGR01361 DAHP_synth_Bsub phos 24.0 3.7E+02 0.0079 24.1 7.5 97 139-246 75-173 (260)
88 PRK12595 bifunctional 3-deoxy- 22.5 3E+02 0.0066 26.0 6.9 95 140-246 169-266 (360)
89 TIGR02384 RelB_DinJ addiction 20.5 1.8E+02 0.0039 21.4 3.9 28 95-122 11-38 (83)
No 1
>KOG3730|consensus
Probab=100.00 E-value=4.5e-51 Score=379.96 Aligned_cols=232 Identities=41% Similarity=0.690 Sum_probs=218.1
Q ss_pred CCchhhhhhhhcCCCCC-CcHHHHHHhc--cccccccccCCCCChHHHHHHHhcCHHHHHHHHHHHhhcCCCcchhhhcc
Q psy15309 14 GRSLKHFVDILEPRRHG-SDLAWVFRSM--ELTKAYDQLRSLSHPEVIKYNVLESEETASIIHEFSLELSLPKEQFSLEL 90 (258)
Q Consensus 14 ~~~~~~f~d~l~~~~~~-~d~~~~~r~~--~~~~~~~~~~~~~~~~~~~~~vl~s~~v~~~i~~~a~~~~~~~~~~~~~~ 90 (258)
..+..+|.|+||+.+.. .|..+|+.+. .+...|-.++. ++|.++++.||+|++++.+|++.+++++.+
T Consensus 21 ~~k~pe~e~~le~~kni~~p~kfa~~t~~fp~~~k~g~~p~-~~p~~ik~sVL~Se~~~sVi~~~~kes~~s-------- 91 (685)
T KOG3730|consen 21 EQKTPEAEEYLENFKNIIAPGKFASMTREFPPQVKYGFEPY-LNPQKIKQSVLRSEKLRSVIEHYAKESGTS-------- 91 (685)
T ss_pred hhcCchHHHHHHHhhccCCChhhhhhhccCCCcceeccCCC-CChHHHHHHHhccHHHHHHHHHHHHhcCCC--------
Confidence 34567999999999988 5888888664 44444445554 899999999999999999999999999988
Q ss_pred cccHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHH
Q psy15309 91 SLPKEQIRLQVLDILNEIGYGRSLTVVRWLGLLLVKILKKTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMA 170 (258)
Q Consensus 91 ~~~~~~~~~~a~~il~em~~~~~~~~~r~~~~~l~~~~~~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~ 170 (258)
.+.+++||++|||||+++.+...+|+|+..+.++++++|+|+.||+.++.++++..++.||||+|.||||+|+++++
T Consensus 92 ---~d~~r~ea~eIlDEmsh~~nl~~IR~cg~ai~ki~k~i~dg~yVNe~~~~~vr~~~~k~pV~~lPSHrsY~DFlllS 168 (685)
T KOG3730|consen 92 ---LDQMRREAREILDEMSHDRNLAIIRWCGIAITKIGKRICDGFYVNEASMANVRKDMGKCPVLYLPSHRSYMDFLLLS 168 (685)
T ss_pred ---HHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHhcceeECHHHHHHHHHHhccCCEEEeccchhHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999998999999999999999999999
Q ss_pred HHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCC
Q psy15309 171 LLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKS 250 (258)
Q Consensus 171 ~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl 250 (258)
++|+.|++++|.||||++|++|..+|.+||++||||+||++++|++||+++++|+..++.+|+.+|+||.||||||++|.
T Consensus 169 ~icy~YDi~iP~IAAGmDF~sMk~mg~~LR~sGAFFMRRsFg~d~LYWaVFsEYv~t~v~N~~~~VEFFiEgTRSR~~K~ 248 (685)
T KOG3730|consen 169 YICYYYDIEIPGIAAGMDFHSMKGMGTMLRKSGAFFMRRSFGNDELYWAVFSEYVYTLVANYHIGVEFFIEGTRSRNFKA 248 (685)
T ss_pred HHHHhccCCCchhhcccchHhhhHHHHHHHhcccceeeeccCCceehHHHHHHHHHHHHhcCCCceEEEEeecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q psy15309 251 LYPKLDT 257 (258)
Q Consensus 251 ~~pK~Gl 257 (258)
+.||.|+
T Consensus 249 L~PK~Gl 255 (685)
T KOG3730|consen 249 LVPKIGL 255 (685)
T ss_pred cCcchhh
Confidence 9999996
No 2
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional
Probab=100.00 E-value=2.6e-46 Score=374.46 Aligned_cols=217 Identities=32% Similarity=0.510 Sum_probs=196.0
Q ss_pred CCCCCcHHHHHHh-ccccccccc-cCCCCChHHHHHHHhcCHHHHHHHHHHHhhcCCCcchhhhcccccHHHHHHHHHHH
Q psy15309 27 RRHGSDLAWVFRS-MELTKAYDQ-LRSLSHPEVIKYNVLESEETASIIHEFSLELSLPKEQFSLELSLPKEQIRLQVLDI 104 (258)
Q Consensus 27 ~~~~~d~~~~~r~-~~~~~~~~~-~~~~~~~~~~~~~vl~s~~v~~~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~i 104 (258)
+..++|+.|+.+. +++.. ++. ..|..++ +++++||+||+|+++|++.|.++|.+ .++++++|.+|
T Consensus 513 ~~~~~dv~w~~~~~~~~~~-~~~~~~p~~~~-eli~~LL~Sp~V~~AI~e~Ak~~Gis-----------~~~v~~eA~~y 579 (1108)
T PTZ00374 513 RKYFDDVVWTQRVGLTANG-WRFAATPGLTP-ESLTSILAQPSIQRLMTALAKKEGAS-----------EKDVEARAKAI 579 (1108)
T ss_pred hhhhhhhHHHHhccccccc-ccccCCCCCCH-HHHHHHhcCHHHHHHHHHHHHHcCCC-----------HHHHHHHHHHH
Confidence 3456999999998 33332 221 1242444 57789999999999999999999999 89999999999
Q ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHhcccEEEccchhhhhhccC--CCCCeEEecCCCCcchHHHHHHHHhhhCCCcce
Q psy15309 105 LNEIGYGRSLTVVRWLGLLLVKILKKTRTSVYVNEEQLNKLRKQW--GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPC 182 (258)
Q Consensus 105 l~em~~~~~~~~~r~~~~~l~~~~~~~~~~i~v~~~g~e~L~~~~--~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~ 182 (258)
|+||+++++.+++|++++++.++|+++|.+|+|+..|+|+|+++. ++.|+||+||||||+|+++++++++++|+++|+
T Consensus 580 L~EIaa~~S~~~IR~~~~~L~kil~rly~gI~V~~~~lerLr~~e~~p~~pvVfVpNHRS~lDyLLLsyvL~~~GL~~P~ 659 (1108)
T PTZ00374 580 LRTCGDNLNHVQCRLFGLMVRRILFRLYDRVSLNSGAFERLHRYVAMPRVAVVLLPLHRSYIDFIIMTYLLAVMGLPLPH 659 (1108)
T ss_pred HHHHccCccHHHHHHHHHHHHHHHHHhcCCEEECcHHHHHHHHHhcCCCCcEEEEeCCccchHHHHHHHHHHhCCCCceE
Confidence 999999999999999999999999999999999998999996533 467999999999999999999999999999999
Q ss_pred eeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 183 VAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 183 iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
|++|+||+++|++|+++|++|+|||||+++++++|+++|++|+++++++|. +++|||||||||||++++||.|+
T Consensus 660 IAAGdNLL~~P~LG~LLR~~GAFFIRRsf~~d~LYsAVLreYI~~LLk~G~-sVeiFpEGTRSRTGKLLpPK~Gl 733 (1108)
T PTZ00374 660 VCAGDDFLRMGPIATLMRGSGAFFMRRSFRDDPLYAALFKEYVRHLVLRRR-PLEFFIEGTRSRTGKTMAPKLGL 733 (1108)
T ss_pred EEEchhhhcchHHHHHHHHCCeEEEeCCCCchHHHHHHHHHHHHHHHhCCC-eEEEecCcCcCCCCCcccchhhH
Confidence 999999999999999999999999999999999999999999999999997 89999999999999999999996
No 3
>PRK03355 glycerol-3-phosphate acyltransferase; Validated
Probab=100.00 E-value=1.3e-44 Score=361.72 Aligned_cols=195 Identities=29% Similarity=0.405 Sum_probs=186.3
Q ss_pred cCCCCChHHHHHHHhcCHHHHHHHHHHHhhcCCCcchhhhcccccHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHH
Q psy15309 49 LRSLSHPEVIKYNVLESEETASIIHEFSLELSLPKEQFSLELSLPKEQIRLQVLDILNEIGYGRSLTVVRWLGLLLVKIL 128 (258)
Q Consensus 49 ~~~~~~~~~~~~~vl~s~~v~~~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~il~em~~~~~~~~~r~~~~~l~~~~ 128 (258)
++.+++|+++++.||+|++|+++|++.|.++|.+ .++++++|.+||+||++++|+.++|++.+ +.++|
T Consensus 175 GP~l~~r~~l~~~ll~s~~v~~aI~~~A~~~g~~-----------~~~~~~~A~~yl~EI~a~~S~~~ir~~~~-L~r~~ 242 (783)
T PRK03355 175 GPQYKVPRLVKPEILASARFRAGLAKIAAKLGRP-----------PGATVREAGKMLDELVAGWSRVSVDLVSV-LGRLF 242 (783)
T ss_pred CCCCCCHHHHHHHHhcCHHHHHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHhcCCCHHHHHHHHH-HHHHH
Confidence 4346899999999999999999999999999998 88999999999999999999999999999 88999
Q ss_pred HHhc-ccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEE
Q psy15309 129 KKTR-TSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFM 207 (258)
Q Consensus 129 ~~~~-~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI 207 (258)
+++| .+|.|++.++++++++++++|+||||||+||+|+++++++++++|+++|+|+||+|| ++|++|+++|.+|+|||
T Consensus 243 ~r~y~~~v~v~~~~~~~lr~~~~~~~vV~vpNHrS~lD~lll~~~l~~~gl~~~~i~Ag~~L-~~~~lG~llr~~Ga~fI 321 (783)
T PRK03355 243 SRGFDPEIDYDEYELAALRALLEEHPAVLLFSHRSYIDGLVVPVAMQENRLPPVHVFGGINL-SFGPMGPIMRRSGMIFI 321 (783)
T ss_pred HHhccccceeCHHHHHHHHhccCCCCEEEEECCCcchHHHHHHHHHhhcCCCCcEEEeHHHh-ccHHHHHHHHHcCcEEe
Confidence 9999 599999999999999999999999999999999999999999999999999999998 68999999999999999
Q ss_pred EcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 208 RRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 208 ~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
+|+++++.+|++++++|++.|+++|. +++|||||||||||++++||.|+
T Consensus 322 rR~~~~~~ly~~vl~eyi~~Ll~~G~-~v~iFpEGTRSrtGkLl~pK~Gl 370 (783)
T PRK03355 322 RRNIGDDPLYKYVLREYVGYLVEKRF-NLSWYIEGTRSRTGKLLPPKLGL 370 (783)
T ss_pred cCCCCchHHHHHHHHHHHHHHHhCCC-eEEEEecCCCCCCCCCCcccccH
Confidence 99998899999999999999999997 89999999999999999999995
No 4
>PRK04974 glycerol-3-phosphate acyltransferase; Validated
Probab=100.00 E-value=6.2e-44 Score=359.21 Aligned_cols=195 Identities=26% Similarity=0.484 Sum_probs=185.1
Q ss_pred ccCCCCChHHHHHHHhcCHHHHHHHHHHHhhcCCCcchhhhcccccHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHH
Q psy15309 48 QLRSLSHPEVIKYNVLESEETASIIHEFSLELSLPKEQFSLELSLPKEQIRLQVLDILNEIGYGRSLTVVRWLGLLLVKI 127 (258)
Q Consensus 48 ~~~~~~~~~~~~~~vl~s~~v~~~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~il~em~~~~~~~~~r~~~~~l~~~ 127 (258)
.++++.++++++++|++||+|+++|++.|.++|.+ .++++++|.+|++||++++++.++|++.+++.++
T Consensus 210 ~GP~l~~r~~l~~~ll~s~~v~~aI~~~A~~~g~~-----------~~~~~~~A~~~l~Ei~~~~s~~~ir~~~~~l~~~ 278 (818)
T PRK04974 210 IGPDLPHRQALFNKLLASPAIKKAIEDEAKSKKIS-----------HEKARQNAIAYMDEIAADYSYSAIRLADRFLTWL 278 (818)
T ss_pred cCCCCCCHHHHHHHHhcCHHHHHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 34467899999999999999999999999999988 8899999999999999999999999999999999
Q ss_pred HHHhcccEEEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEE
Q psy15309 128 LKKTRTSVYVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYF 206 (258)
Q Consensus 128 ~~~~~~~i~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~Gaff 206 (258)
|+++|.+|+|+ |.|+|+++. ++.|+||||||+||+|+++++++++++|+.+|+||+|++| ++|++|+++|++|+||
T Consensus 279 ~~~ly~~i~V~--g~e~L~~~~~~~~~vI~v~NHrS~lD~llL~~~l~~~gl~~p~iAagenl-~~p~lg~llr~~Gaff 355 (818)
T PRK04974 279 WNRLYQGINVH--NAERVRQLAQDGHEIVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINL-NFWPAGPIFRRGGAFF 355 (818)
T ss_pred HHHHhCceEEc--chhhhhhcccCCCCEEEEeCCCCchHHHHHHHHHhhcCCCCceEEehHHh-cchHHHHHHHHCCceE
Confidence 99999999998 999999877 4669999999999999999999999999999999999886 8999999999999999
Q ss_pred EEcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 207 MRRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 207 I~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
|+|+++++++|+++|++|+++++++|. ++||||||||||||+++|||.|+
T Consensus 356 IrR~~~~~~ly~~vl~~yi~~ll~~G~-~v~iFpEGtRSRtGkllppK~G~ 405 (818)
T PRK04974 356 IRRSFKGNKLYSTVFREYLGELFARGY-SVEYFVEGGRSRTGRLLQPKTGM 405 (818)
T ss_pred eeCCCCchHHHHHHHHHHHHHHHhCCC-EEEEEcCCCcCCCCCCcchhhhH
Confidence 999998889999999999999999997 99999999999999999999995
No 5
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system.
Probab=100.00 E-value=1.6e-43 Score=355.98 Aligned_cols=195 Identities=29% Similarity=0.522 Sum_probs=185.0
Q ss_pred ccCCCCChHHHHHHHhcCHHHHHHHHHHHhhcCCCcchhhhcccccHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHH
Q psy15309 48 QLRSLSHPEVIKYNVLESEETASIIHEFSLELSLPKEQFSLELSLPKEQIRLQVLDILNEIGYGRSLTVVRWLGLLLVKI 127 (258)
Q Consensus 48 ~~~~~~~~~~~~~~vl~s~~v~~~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~il~em~~~~~~~~~r~~~~~l~~~ 127 (258)
.++++.+++++++.|++||+|+++|++.|.++|.+ .++++++|.+|++||++++|+.++|++++++.++
T Consensus 200 ~GP~l~~r~~l~~~ll~s~~v~~aI~~~a~~~~~~-----------~~~~~~~A~~~l~EI~~~~S~~~ir~~~~~l~~~ 268 (799)
T TIGR03703 200 IGPDLSHRRTLFNKLLASPSVRKAIRDEAKSKKIS-----------EEKARKRALKYLDEIAADYSYSLIRFLDRFLTWL 268 (799)
T ss_pred cCCCCCCHHHHHHHHhcCHHHHHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence 35567999999999999999999999999999988 8899999999999999999999999999999999
Q ss_pred HHHhcccEEEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEE
Q psy15309 128 LKKTRTSVYVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYF 206 (258)
Q Consensus 128 ~~~~~~~i~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~Gaff 206 (258)
|+++|.+|+|+ |.|+++++. ++.|+||+|||+||+|+++++++++++++.+|+||+|++| ++|++|+++|++|+||
T Consensus 269 ~~~ly~~v~V~--g~E~l~~~~~~~~pvI~vpNHrS~lD~llL~~~l~~~~l~~p~iaag~nL-~~p~~g~llr~~Gaff 345 (799)
T TIGR03703 269 WNKLYQGINVN--NADRVRKLAQKGHEIIYVPCHRSHMDYLLLSYVLYHEGLVPPHIAAGINL-NFWPAGPIFRRGGAFF 345 (799)
T ss_pred HHHHcCceEEe--chhhcccccCCCCcEEEEECCCCchHHHHHHHHHhhcCCCCceEEechhh-ccHHHHHHHHHCCceE
Confidence 99999999998 999998876 4569999999999999999999999999999999999987 7999999999999999
Q ss_pred EEcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 207 MRRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 207 I~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
|+|+++++++|++++++|++.++++|. ++||||||||||||++++||.|+
T Consensus 346 IrR~~~~~~ly~~vl~eyi~~ll~~G~-~v~iFpEGtRSrtGkll~pK~G~ 395 (799)
T TIGR03703 346 IRRSFKGNKLYSAVFREYLHELFAKGY-SVEYFVEGGRSRTGRLLPPKTGM 395 (799)
T ss_pred eecCCCcchhHHHHHHHHHHHHHhCCC-EEEEEcCCCcCCCCCccchHHHH
Confidence 999998888999999999999999997 89999999999999999999995
No 6
>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism]
Probab=100.00 E-value=8.4e-44 Score=344.45 Aligned_cols=194 Identities=27% Similarity=0.443 Sum_probs=185.1
Q ss_pred cCCCCChHHHHHHHhcCHHHHHHHHHHHhhcCCCcchhhhcccccHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHH
Q psy15309 49 LRSLSHPEVIKYNVLESEETASIIHEFSLELSLPKEQFSLELSLPKEQIRLQVLDILNEIGYGRSLTVVRWLGLLLVKIL 128 (258)
Q Consensus 49 ~~~~~~~~~~~~~vl~s~~v~~~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~il~em~~~~~~~~~r~~~~~l~~~~ 128 (258)
++.+++|+.++.++|+|+.|++||...++.+|.+ .++..++|.++++||++++|...+|+...++++.|
T Consensus 206 GP~l~~rr~l~~~lLas~~ir~aia~eak~~~is-----------~EkA~k~a~~~a~eiaa~fS~~~vr~~dr~ls~~w 274 (810)
T COG2937 206 GPRLPSRRLLFNKLLASAAIRKAIADEARSKGIS-----------VEKAQKMADELATEIAADFSYELIRVLDRILSRGW 274 (810)
T ss_pred CCCCCCHHHHHHHHhhhHHHHHHHhhHhhccCCC-----------HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence 4456999999999999999999999999999988 88899999999999999999999999999999999
Q ss_pred HHhcccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEE
Q psy15309 129 KKTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMR 208 (258)
Q Consensus 129 ~~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~ 208 (258)
+++|.++.|+ ..++.+.+..++++||||+||||+|+++++|+++.+|+++|+|+||.|| ++|++|.++|++||||||
T Consensus 275 n~ly~g~~vq--~a~r~r~a~~gheiVyvpcHRShiDylLLsy~ly~ngLvPpHiaAGINL-Nf~p~G~i~RR~GAfFIR 351 (810)
T COG2937 275 NRLYQGDEVQ--NAERRRLALDGHEIVYVPCHRSHIDYLLLSYVLYHNGLVPPHIAAGINL-NFWPMGPIFRRGGAFFIR 351 (810)
T ss_pred hhhhhhhhHH--HHHHHHhhhcCCceEEEecchhhhhHHHHHHHHHhcCCCcchhhccccc-cCccchHHHHhccceEEE
Confidence 9999999998 6666666677899999999999999999999999999999999999998 899999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 209 RTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 209 R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
|+++++++|+.+|++|+.+|...|+ ++++|+||||||||+++|||.|+
T Consensus 352 RsfKgn~LYs~VfrEYl~~Lf~rgy-sleyfIEGGRSRTGrlL~PKtGm 399 (810)
T COG2937 352 RTFKGNPLYSTVFREYLGELFSRGY-SLEYFIEGGRSRTGRLLPPKTGM 399 (810)
T ss_pred eccCCChhHHHHHHHHHHHHHhCCc-ceEEEeecCccccCCcCCCccch
Confidence 9999999999999999999999999 89999999999999999999996
No 7
>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed
Probab=100.00 E-value=1.9e-42 Score=337.44 Aligned_cols=189 Identities=25% Similarity=0.332 Sum_probs=177.1
Q ss_pred CChHHHHHHHhcCHHHHHHHHHHHhhcCCCcchhhhcccccHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhc
Q psy15309 53 SHPEVIKYNVLESEETASIIHEFSLELSLPKEQFSLELSLPKEQIRLQVLDILNEIGYGRSLTVVRWLGLLLVKILKKTR 132 (258)
Q Consensus 53 ~~~~~~~~~vl~s~~v~~~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~il~em~~~~~~~~~r~~~~~l~~~~~~~~ 132 (258)
.++.++.+ |++||.|+++|+++|.++|.+ .++++++|.+|++||++++++.++|++..+..+++ ++|
T Consensus 30 ~~~~e~~~-ll~s~~~~~~i~~~a~~~g~~-----------~~~v~~~A~~~l~EI~~~~s~~~ir~~~~~~~~l~-r~Y 96 (621)
T PRK11915 30 TDPVEVTQ-LLDARWYDERLRALADELGRD-----------PDSVRAEAAGYLREMAASLDERAVQAWRGFSRWLM-RAY 96 (621)
T ss_pred CCHHHHHH-HhcCHHHHHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH-HHH
Confidence 67777755 999999999999999999988 89999999999999999999999999987766555 778
Q ss_pred ccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCC
Q psy15309 133 TSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYG 212 (258)
Q Consensus 133 ~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~ 212 (258)
. |+|+..++++|+++.++.|+||+||||||+|+++++|+|+.+++.+|++++|+++ ++|++|.++|++|+|||+|+++
T Consensus 97 ~-v~v~~~~~~~lr~~~~~~pvIfvp~HrS~lDylllsyvL~~~~l~~~~~~ag~nl-~~~~lg~~lr~~GafFirRsf~ 174 (621)
T PRK11915 97 D-VLVDEDQITQLRKLDRKATLAFAFSHRSYLDGMLLPEVILANRLSPALTFGGANL-NFFPMGAWAKRTGAIFIRRQTK 174 (621)
T ss_pred e-EEeCHHHHHHHHHhccCCCEEEEeccccccHHHHHHHHHHHcCCCCceeehhhhh-cchhHHHHHHhCCcEEeccCCC
Confidence 4 8999999999999999999999999999999999999999999999999999776 7899999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 213 TDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 213 ~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
++++|+++|++|++.++++|. +++||||||||||||++|||.|+
T Consensus 175 ~~~LY~~vl~eYi~~ll~~G~-~le~F~EG~RSRtGkll~Pk~Gl 218 (621)
T PRK11915 175 DIPVYRFVLRAYAAQLVQNHV-NLTWSIEGGRTRTGKLRPPVFGI 218 (621)
T ss_pred CchHHHHHHHHHHHHHHhCCC-cEEEEeCCCCCCCCCCCCCchhh
Confidence 999999999999999999997 89999999999999999999996
No 8
>KOG3729|consensus
Probab=99.98 E-value=7.3e-33 Score=261.29 Aligned_cols=245 Identities=21% Similarity=0.320 Sum_probs=181.3
Q ss_pred CCCCCCCCCCCCCchhhhhhh--hcCCCCCCcHHHHHHhccccccccccCCCCChH----HHHHHHhcCHHHHHHHHHHH
Q psy15309 3 TPMSNSNKPSGGRSLKHFVDI--LEPRRHGSDLAWVFRSMELTKAYDQLRSLSHPE----VIKYNVLESEETASIIHEFS 76 (258)
Q Consensus 3 ~~~~~~~~~~~~~~~~~f~d~--l~~~~~~~d~~~~~r~~~~~~~~~~~~~~~~~~----~~~~~vl~s~~v~~~i~~~a 76 (258)
||++|...+.......+..-+ -+.+.++ .+|..+++..+. ++.++. .+-. ..-..+|++.+++.++...+
T Consensus 10 ~~q~~~~~~~~fp~~~~vvr~e~~e~~~~~--~~~~~~~~~~v~-~~q~~~-~~l~~fry~~~~~~l~~~~~~e~~~~~~ 85 (715)
T KOG3729|consen 10 ITQLRSHCETCFPLMEEVVRRERYVDLLEF--SNFNGIPYPVVD-PSRKPR-RFLADFRYSWSIPLIHHYPNVEKDVLSS 85 (715)
T ss_pred chhHHHhccCCCchhhhhhhhhhhhhHHHh--hcccCccceeec-chhhhH-HHHHHHHhhcccchhccccchhhHHHHH
Confidence 556665555544444433311 1222222 355555554444 333322 1111 12345788888888888777
Q ss_pred hhcCCCcchhhhcccccHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcccEEEccchhhhhhccCC-CCCeE
Q psy15309 77 LELSLPKEQFSLELSLPKEQIRLQVLDILNEIGYGRSLTVVRWLGLLLVKILKKTRTSVYVNEEQLNKLRKQWG-DNPVL 155 (258)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~a~~il~em~~~~~~~~~r~~~~~l~~~~~~~~~~i~v~~~g~e~L~~~~~-~~pvV 155 (258)
++.......+| +..++-+.+|.+++.+|.+..+.+...++.|++.+++.++..++.++.+..|.+..+.+ +.|.|
T Consensus 86 ~e~~~~gs~~q----~~~~~qk~ra~~~~~~~~~~l~~~~~~~~s~~lykl~~~~~~~~~~~~~~~e~l~~a~~tg~Pli 161 (715)
T KOG3729|consen 86 KRVHRVISKLK----EQNDEQKNRAVQFFTEISARLSKFICKCCSYVLYKVFRRLMDKLLVCKEEMEVLYEAEQTGIPMV 161 (715)
T ss_pred hhhcchhHHHH----HHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhHhhhHHHHHHHHHHhhcCCceE
Confidence 76332222221 11344467788888888888888888888888888888877777777777776655443 77999
Q ss_pred EecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCC------CCcHHHHHHHHHHHHHHH
Q psy15309 156 FLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTY------GTDKLYWRVFDVYVQALV 229 (258)
Q Consensus 156 ~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~------~~~~ly~~vl~~yi~~ll 229 (258)
|+|-||||+|++++.++|+++|+..|+||+|.|| ++|.+||++|.+|+|||+|.. ++|.+|++++..|+.+++
T Consensus 162 FlPlHRSHlDYlliTwIL~~~~Ik~P~iAsGNNL-nIP~Fg~Llr~LGaFFIrRriDp~~~G~KDVLYRA~LH~yi~~~L 240 (715)
T KOG3729|consen 162 FLPLHRSHLDYLLITWILWHFGIKLPHIASGNNL-NIPGFGWLLRALGAFFIRRRVDPDDEGGKDVLYRAILHSYIEQVL 240 (715)
T ss_pred EEecchhhhhHHHHHHHHHhcCcCCceeccCCcc-ccchHHHHHHhcchheeeeccCCCcccchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999776 999999999999999999974 467899999999999999
Q ss_pred HcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 230 TSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 230 ~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
++|+ +++||.||||||+||...||.|+
T Consensus 241 ~Q~~-~iEfFlEGtRsR~GK~~~pk~Gl 267 (715)
T KOG3729|consen 241 SQDM-PIEFFLEGTRSRFGKALTPKNGL 267 (715)
T ss_pred hCCC-ceEEEEeccccccCCcCCccccc
Confidence 9997 89999999999999999999997
No 9
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins.
Probab=99.96 E-value=5.9e-29 Score=215.19 Aligned_cols=124 Identities=48% Similarity=0.844 Sum_probs=112.7
Q ss_pred cccEEEccchhhhhhccCCC-CCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcC
Q psy15309 132 RTSVYVNEEQLNKLRKQWGD-NPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRT 210 (258)
Q Consensus 132 ~~~i~v~~~g~e~L~~~~~~-~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~ 210 (258)
+++|.|+..++|+|+++.++ +|+||++||+|++|++++.++++..+++.+++++++++ ..|++||+++.+|+|||+|+
T Consensus 1 ~~~i~v~~~~~~~l~~~~~~~~~~i~v~NH~S~lD~~~l~~~~~~~~~~~~~va~~e~~-~~~~~g~~l~~~g~i~I~R~ 79 (205)
T cd07993 1 FDGVQVNEGQLERLRKAAQEGHPVVLLPTHRSYLDFLLLSFILFSLGLPLPHIAAGENL-NIPILGTLLRRLGAFFIRRS 79 (205)
T ss_pred CCcEEEcHHHHHHHHHHhhcCCCEEEEecCcchhHHHHHHHHHHHCCCCCcEEEEchhh-CcHHHHHHHHHCCCEEEecC
Confidence 35799999999999988776 89999999999999999999998888888898888665 67899999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 211 YGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 211 ~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
.+++.+|++++.+++.+++++|. +++||||||||++|++++||.|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~g~-~l~iFPEGtrs~~g~~~~~k~G~ 125 (205)
T cd07993 80 FGKDPLYRAVLQEYVQELLKNGQ-PLEFFIEGTRSRTGKLLPPKLGL 125 (205)
T ss_pred CCccHHHHHHHHHHHHHHHhCCc-eEEEEcCCCCCCCCCccchHHHH
Confidence 87777788889999999999997 89999999999999999999984
No 10
>KOG2848|consensus
Probab=99.91 E-value=1.6e-24 Score=190.04 Aligned_cols=115 Identities=17% Similarity=0.213 Sum_probs=100.4
Q ss_pred ccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCC
Q psy15309 133 TSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYG 212 (258)
Q Consensus 133 ~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~ 212 (258)
.|++++++|.|+|+ +++|+|+|+||||.+|.+.+..+++. .+ .++++.+|+-.|++||++..+|.+||||..+
T Consensus 73 ~g~r~ev~g~E~L~---~~~p~ViVsNHQS~LDil~m~~i~p~---~c-vviaKr~L~yvp~~gl~m~L~gvvfIdR~r~ 145 (276)
T KOG2848|consen 73 LGLRFEVRGEENLP---KSKPAVIVSNHQSSLDILGMGSIWPK---NC-VVIAKRSLFYVPIFGLAMYLSGVVFIDRSRR 145 (276)
T ss_pred cceEEEEechhhCC---ccCCeEEEecchhHHHHHHHHhhcCC---ce-EEEEeeeeeecchHHHHHHHcCceEEecCCH
Confidence 47888888999997 57799999999999999999888754 23 3456669999999999999999999999988
Q ss_pred CcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 213 TDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 213 ~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
.+++ +++....+++.+++. .||+||||||+++|.++|||+|.
T Consensus 146 ~~Ai--~~l~~~~~~mkk~~~-kvWvFPEGTRn~~g~llPFKKGA 187 (276)
T KOG2848|consen 146 EKAI--DTLDKCAERMKKENR-KVWVFPEGTRNKEGRLLPFKKGA 187 (276)
T ss_pred HHHH--HHHHHHHHHHHhCCe-eEEEccCCccCCCCcccccccce
Confidence 7754 789999998887775 89999999999999999999994
No 11
>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional
Probab=99.91 E-value=4.9e-24 Score=189.71 Aligned_cols=131 Identities=14% Similarity=0.141 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHhcccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhH
Q psy15309 115 TVVRWLGLLLVKILKKTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFL 194 (258)
Q Consensus 115 ~~~r~~~~~l~~~~~~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ 194 (258)
...+.++.++.++.. +.|+++...|.|+++ +++|+|+++||+|++|.+++..++.. ...+.+++++++.|+
T Consensus 33 ~~~~~~~~~~~~~~~--~~g~~v~v~g~e~~p---~~~~~IivaNH~S~lD~~~l~~~~~~----~~~fvaK~el~~~P~ 103 (245)
T PRK15018 33 KHVATFGHMFGRLAP--LFGLKVECRKPADAE---SYGNAIYIANHQNNYDMVTASNIVQP----PTVTVGKKSLLWIPF 103 (245)
T ss_pred hHHHHHHHHHHHHHH--HcCeEEEEEccCCCC---CCCCEEEEECCCchHHHHHHHHHhCC----CcEEEEeHHHhhCCH
Confidence 334444444444433 357888877988875 57899999999999999887665532 134567779999999
Q ss_pred HHHHHHhCCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 195 MGNMLRGCSAYFMRRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 195 ig~llr~~GaffI~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
+||+++.+|++||||++.... .+++.+.++.+.++|. +++||||||||++|++++||.|.
T Consensus 104 ~g~~~~~~g~i~VdR~~~~~~--~~~l~~~~~~l~~~g~-sv~IFPEGTRs~~g~l~~Fk~Ga 163 (245)
T PRK15018 104 FGQLYWLTGNLLIDRNNRTKA--HGTIAEVVNHFKKRRI-SIWMFPEGTRSRGRGLLPFKTGA 163 (245)
T ss_pred HHHHHHhCCCeEEeCCCHHHH--HHHHHHHHHHHHhCCC-EEEEECCccCCCCCCCCCccHHH
Confidence 999999999999999865543 2567777777666676 89999999999999999999984
No 12
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]
Probab=99.86 E-value=1.4e-21 Score=171.42 Aligned_cols=127 Identities=28% Similarity=0.325 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHhcccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHH
Q psy15309 119 WLGLLLVKILKKTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNM 198 (258)
Q Consensus 119 ~~~~~l~~~~~~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~l 198 (258)
++......++...+.+++|. |.|+++ +++|+|+++||+|++|.++++++++..+ ...+++++++++.|++|++
T Consensus 36 ~~~~~~~~~~~~~~~r~~v~--G~e~lp---~~~~~ivvaNH~S~~D~~~l~~~~~~~~--~~~f~~k~~l~~~p~~g~~ 108 (255)
T COG0204 36 WLRFLVLLLLLLFGLRVEVE--GLENLP---KGGPALVVANHQSFLDPLLLSLALPRRG--PVRFVAKKELFKVPLLGWL 108 (255)
T ss_pred HHHHHHHHHHHHhCceEEEE--eeecCC---CCCCEEEEECchhhhhHHHHhhhcCCCc--ceEEEeehhhccCchHHHH
Confidence 33333344455555555555 999986 4699999999999999999999887755 3466778899999999999
Q ss_pred HHhCCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCC-CCCCCCCC
Q psy15309 199 LRGCSAYFMRRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGK-SLYPKLDT 257 (258)
Q Consensus 199 lr~~GaffI~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGk-l~~pK~Gl 257 (258)
++..|++||+|+..++ .++.+.++.+.++|. .++|||||||+++|. +.++|.|.
T Consensus 109 ~~~~~~i~v~r~~~~~----~~~~~~~~~~~~~g~-~l~iFPEGtr~~~~~~~~~~k~g~ 163 (255)
T COG0204 109 LRLLGAIPVDRENPDD----ETLRAAVARLKAGGR-SLVIFPEGTRSRGGEELLPFKRGA 163 (255)
T ss_pred HHHcCeeEecCCCCcH----HHHHHHHHHHHhCCc-EEEECCCcCcCCCccccCCCcchH
Confidence 9999999999998765 345666777776676 899999999999966 99999884
No 13
>PTZ00261 acyltransferase; Provisional
Probab=99.85 E-value=4e-21 Score=177.50 Aligned_cols=107 Identities=13% Similarity=0.103 Sum_probs=82.2
Q ss_pred CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCc------HHHHHHHHH
Q psy15309 150 GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTD------KLYWRVFDV 223 (258)
Q Consensus 150 ~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~------~ly~~vl~~ 223 (258)
+.+|+|+++||+|++|.+++..+++..-+.-..++++++|+++|++||+++.+|+|+|+|+.+.. .-..+.+.+
T Consensus 127 P~~~~IivsNHqS~lDi~vl~~~~p~r~~~~~~fVAKkELfkiP~fG~~l~~~G~IPVdR~~~~~g~~~vdrea~~~v~~ 206 (355)
T PTZ00261 127 SRHGCAYVGNHTSFWDVYAFIGLTPFRHLLNTRTLMKSSLRKIPIFGGVFDRVGHFPVHFKSDSDGNFEVDKEKQAQVQQ 206 (355)
T ss_pred CCCCEEEEECCCchHHHHHHHHHcccccccccEEEEHHHHhhccHHHHHHHHCCCeeeecccccccccccchHHHHHHHH
Confidence 35699999999999999998887763211123556788999999999999999999999864321 111223444
Q ss_pred HHHHHHHcCCceEEEEeCCccCCCC-CCCCCCCCC
Q psy15309 224 YVQALVTSCVAPLEFFIEGTRSRTG-KSLYPKLDT 257 (258)
Q Consensus 224 yi~~ll~~g~~~l~iFpEGtRSrtG-kl~~pK~Gl 257 (258)
.+++.+++|. +|+||||||||++| .+++||.|.
T Consensus 207 ~~~e~Lk~G~-sLvIFPEGTRS~~gg~L~pFK~Ga 240 (355)
T PTZ00261 207 AIDAHLRLGG-SLAFFPEGAINKHPQVLQTFRYGT 240 (355)
T ss_pred HHHHHHHCCC-EEEEECCcCCcCCCCcCCCCcHHH
Confidence 4556789997 99999999999986 599999983
No 14
>PRK14014 putative acyltransferase; Provisional
Probab=99.83 E-value=3.6e-20 Score=169.46 Aligned_cols=133 Identities=17% Similarity=0.103 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHhcccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHH
Q psy15309 118 RWLGLLLVKILKKTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGN 197 (258)
Q Consensus 118 r~~~~~l~~~~~~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~ 197 (258)
+.+...+..++.. +.++++.+.|.|+++ +++|+|+++||+|++|.+++..++.. .++.+.++++++|+++|++|+
T Consensus 57 ~~w~~~~~~~~~~-~~g~k~~V~G~e~l~---~~~~~IiisNHqS~~D~l~l~~~~~~-~~~~~kfv~K~eL~~iP~~G~ 131 (301)
T PRK14014 57 EAWISINNVILRL-LPRTQWDVEGLEGLS---KKGWYLVISNHQSWVDILVLQYVFNR-RIPMLKFFLKQELIWVPFLGL 131 (301)
T ss_pred HHHHHHHHHHHHH-hCCcEEEEEcCCCCC---CCCCEEEEECCCcHHHHHHHHHHHhh-ccCceEEEehHHhhhcccHHH
Confidence 3334444444444 347788778999875 57899999999999999998887754 445556778889999999999
Q ss_pred HHHhCCcEEEEcCCCCcH--------HHHHHHHHHHHHHHHcCCceEEEEeCCccCCCC----------CCCCCCCC
Q psy15309 198 MLRGCSAYFMRRTYGTDK--------LYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTG----------KSLYPKLD 256 (258)
Q Consensus 198 llr~~GaffI~R~~~~~~--------ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtG----------kl~~pK~G 256 (258)
.++.+|.+||+|+..... -..+.+++..+.+...|. ++.|||||||+.+| .+++||.|
T Consensus 132 ~~~~~~~ifi~R~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~~-~l~IFPEGTR~t~~k~~~~~~~~~~lL~pk~g 207 (301)
T PRK14014 132 AWWALDFPFMKRYSKAYLAKNPELKGKDLETTRRACEKFKRMPT-TIVNFVEGTRFTPEKHQQQQSPYQHLLKPKAG 207 (301)
T ss_pred HHHHcCCeEEeccchhhhhhchhhhhhHHHHHHHHHHHHhcCCc-EEEEeccceecCcccccccCCCcccccCCCCc
Confidence 999999999999754211 002345566666665675 89999999997655 68899987
No 15
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences.
Probab=99.82 E-value=2.7e-20 Score=161.64 Aligned_cols=111 Identities=18% Similarity=0.254 Sum_probs=88.7
Q ss_pred ccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCC
Q psy15309 133 TSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYG 212 (258)
Q Consensus 133 ~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~ 212 (258)
.++++.+.|.++++ ++|+|+++||+|++|.+++..+. + +.++++.++++.|++|++++.+|+++|+|+..
T Consensus 9 ~~~~~~v~g~~~~p----~~~~iiv~NH~S~~D~~~l~~~~-----~-~~fv~k~el~~~p~~g~~~~~~g~i~v~R~~~ 78 (211)
T cd07991 9 GFYVIKVHGKPDPP----EAPRIIVANHTSFIDPLILFSDL-----F-PSIVAKKELGKLPFIGTILRALGCIFVDRSEP 78 (211)
T ss_pred EEEEEEEECCCCCC----CCCeEEEECCCcHHHHHHHhhhc-----C-cEEEEehhhccCcHHHHHHHhCCceEEeCCCc
Confidence 35677777988874 67999999999999999987762 2 45677789999999999999999999999876
Q ss_pred CcHHHHHHHHHHHHHHHH--cCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 213 TDKLYWRVFDVYVQALVT--SCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 213 ~~~ly~~vl~~yi~~ll~--~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
.+. .+++++.. +.++ +|. +|+||||||||++|.+++||.|.
T Consensus 79 ~~~--~~~~~~~~-~~~~~~~g~-~v~iFPEGtrs~~~~l~~Fk~ga 121 (211)
T cd07991 79 KDR--KKVVEEIK-ERATDPNWP-PILIFPEGTTTNGKALIMFKKGA 121 (211)
T ss_pred hhH--HHHHHHHH-HHHhCCCCC-eEEEecCccccCCCEEEeecccc
Confidence 432 23444444 3444 466 89999999999999999999985
No 16
>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.82 E-value=1.3e-19 Score=157.92 Aligned_cols=112 Identities=20% Similarity=0.255 Sum_probs=88.5
Q ss_pred EEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCc
Q psy15309 135 VYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTD 214 (258)
Q Consensus 135 i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~ 214 (258)
++++..|.|++++ .++|+|+++||+|++|.+++..+ ..+ ..++++++++..|++|++++..|+++|+|+.+++
T Consensus 35 ~~~~v~g~e~lp~--~~~p~iiv~NH~S~~D~~~l~~~----~~~-~~~v~k~~l~~~P~~g~~~~~~~~i~v~R~~~~~ 107 (214)
T PLN02901 35 YKIEVEGLENLPS--PDEPAVYVSNHQSFLDIYTLFHL----GRP-FKFISKTSIFLIPIIGWAMYMTGHIPLKRMDRRS 107 (214)
T ss_pred eeEEEECCccCCC--CCCcEEEEECCCCchHHHHHhhc----CCc-eEEEEEHHhhhccHHHHHHHHCCcEEEecCCcHH
Confidence 4444559988852 36899999999999998776421 222 3467778999999999999999999999986544
Q ss_pred HHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 215 KLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 215 ~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
. .+.+++..+ .+++|. +++|||||||+.+|++.+++.|.
T Consensus 108 ~--~~~~~~~~~-~l~~g~-~v~IfPEGtr~~~~~~~~f~~G~ 146 (214)
T PLN02901 108 Q--LECLKRCME-LLKKGA-SVFFFPEGTRSKDGKLAAFKKGA 146 (214)
T ss_pred H--HHHHHHHHH-HHhCCC-EEEEeCCCCCCCCCcccCchhhH
Confidence 2 245667665 567997 89999999999999999999884
No 17
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins.
Probab=99.81 E-value=1.2e-19 Score=156.57 Aligned_cols=120 Identities=23% Similarity=0.200 Sum_probs=92.4
Q ss_pred HHHHhcccEEEccchhhhhhccCCCCCeEEecCCC-CcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcE
Q psy15309 127 ILKKTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHR-SYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAY 205 (258)
Q Consensus 127 ~~~~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHr-S~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~Gaf 205 (258)
+++.+|..++|. |.|+++ +++|+||++||+ |++|++++..++ +.++ .++++.+++..|++|++++.+|++
T Consensus 8 ~~~~~~~~v~v~--G~e~lp---~~~~~I~v~NH~~s~~D~~~l~~~~---~~~~-~~v~~~~~~~~p~~~~~~~~~g~i 78 (203)
T cd07992 8 ILRIYFRRITVV--GRENVP---KDGPVIFLGNHPNALIDPLLLAATL---RRPV-RFLAKADLFKNPLIGWLLESFGAI 78 (203)
T ss_pred hhhhEeeeeEEE--CCccCC---CCCCEEEEeCCccchhhHHHHHHhc---CCCc-EEEEEhhhccchHHHHHHHHcCce
Confidence 344444456665 998874 578999999999 679999887764 2243 445566888899999999999999
Q ss_pred EEEcCCCCc------HHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 206 FMRRTYGTD------KLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 206 fI~R~~~~~------~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
+|+|+.... ..+..+++... +.+++|. +++|||||||+++|++.+||.|.
T Consensus 79 pI~r~~~~~~~~~~~~~~~~~~~~~~-~~l~~G~-~l~IFPEGtr~~~~~~~~fk~G~ 134 (203)
T cd07992 79 PVYRPKDLARGGIGKISNAAVFDAVG-EALKAGG-AIGIFPEGGSHDRPRLLPLKAGA 134 (203)
T ss_pred EeEcCCCcccccccchhHHHHHHHHH-HHHhCCC-EEEEeCCCCCCCCCCccCcCccH
Confidence 999986432 12234555544 5678997 89999999999999999999985
No 18
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []. This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A.
Probab=99.79 E-value=3.8e-20 Score=147.23 Aligned_cols=113 Identities=22% Similarity=0.273 Sum_probs=68.8
Q ss_pred ccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHHH
Q psy15309 138 NEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKLY 217 (258)
Q Consensus 138 ~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ly 217 (258)
+..|.|+++ +++|+|+++||+|.+|.+++.+++...+...+.++++++++..|++|++++..|+++|+|+...+ .
T Consensus 3 ~v~g~e~l~---~~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~i~r~~~~~--~ 77 (132)
T PF01553_consen 3 EVEGLENLP---KGGGVIFVSNHQSWLDGFALMALLQRSGPRRPRFVAKDELFKIPFLGWFLRRLGFIPIDRSNRKK--N 77 (132)
T ss_dssp ---HHHHHH---TT-EEEEEE----TTHHHHHHHHHTTT-HHH-EEEEECHHHH-TTTHHHHHEEEEE--CCHHHHH--H
T ss_pred ccCccccCC---CCCCEEEEecCCCCCcchheeehhhhhccccceeEeeeccccchhhhhhhhhccceeeeeecccc--c
Confidence 344999997 48999999999999999999998865543456778888988899999999999999999943222 1
Q ss_pred HHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 218 WRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 218 ~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
...++. +.+.+++|. +++|||||||+++++++++|.|.
T Consensus 78 ~~~~~~-~~~~l~~~~-~i~ifPEG~~~~~~~~~~~~~G~ 115 (132)
T PF01553_consen 78 RKALKD-IKEILRKGG-SIVIFPEGTRSRSGELLPFKKGA 115 (132)
T ss_dssp HHHHHH-HHHHHHC----EEE-TT-S---B--B----HHH
T ss_pred chhHHH-HHHHhhhcc-eeeecCCccCcCCCccCCccHHH
Confidence 244444 445788996 79999999999999999999874
No 19
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase.
Probab=99.78 E-value=9.4e-19 Score=138.82 Aligned_cols=112 Identities=21% Similarity=0.179 Sum_probs=88.6
Q ss_pred EEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCc
Q psy15309 135 VYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTD 214 (258)
Q Consensus 135 i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~ 214 (258)
++++..|.++++ +++|+|+++||.|.+|.+++...+. .+ ..++++.++++.|+++++++..|+++|+|+...+
T Consensus 2 ~~~~v~g~~~lp---~~~~~i~v~nH~s~~D~~~~~~~~~---~~-~~~~~~~~~~~~p~~~~~~~~~g~~~i~r~~~~~ 74 (130)
T TIGR00530 2 LKVEVVGPENLP---AKSPVLVVANHQSNLDPLTLSAAFP---PP-IVFIAKKELKWIPFFGIMLWLTGAIFIDRENIRA 74 (130)
T ss_pred cEEEEECcccCC---CCCCEEEEECCCchhHHHHHHHHcC---CC-cEEEEhHHhhhCCHHHHHHHHcCCEEecCCChHH
Confidence 344555888885 4889999999999999998877663 23 3456666888999999999999999999986322
Q ss_pred HHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 215 KLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 215 ~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
. ..++++ +.+++++|. +++|||||+|+++|++.+|+.|.
T Consensus 75 ~--~~~~~~-~~~~l~~g~-~v~ifPeG~~~~~~~~~~f~~g~ 113 (130)
T TIGR00530 75 I--ATALKA-AIEVLKQGR-SIGVFPEGTRSRGRDILPFKKGA 113 (130)
T ss_pred H--HHHHHH-HHHHHhCCC-EEEEeCCCCCCCCCCCCCcchhH
Confidence 1 233444 446788997 89999999999999999999985
No 20
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.76 E-value=1.6e-18 Score=174.24 Aligned_cols=111 Identities=23% Similarity=0.160 Sum_probs=90.6
Q ss_pred HhcccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEc
Q psy15309 130 KTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRR 209 (258)
Q Consensus 130 ~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R 209 (258)
+++.+++|. |.|+++ +++|+|+++||+|++|.+++..+++. . +.++++.++++.|++|++++.+|+++|+|
T Consensus 11 ~~~~~~~v~--g~~~~~---~~~~~i~v~NH~s~~D~~~l~~~~~~---~-~~~~~k~~l~~~~~~~~~~~~~~~i~v~r 81 (718)
T PRK08043 11 RVLYRVRVT--GDTQAL---KGERVLITPNHVSFLDGILLALFLPV---R-PVFAVYTSISQQWYMRWLKPYIDFVPLDP 81 (718)
T ss_pred HHeEEEEEE--ccccCC---CCCCEEEEECCCchHHHHHHHHhCCC---C-eEEEEeHHHhhhHHHHHHHHhCCEEEecC
Confidence 333467776 888875 57899999999999999999887753 2 44566779999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 210 TYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 210 ~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
+.. ..+++.+ +.+++|. +|+||||||||++|++.+||.|.
T Consensus 82 ~~~------~~~~~~~-~~l~~g~-~~~iFPEGtr~~~~~~~~~k~G~ 121 (718)
T PRK08043 82 TKP------MAIKHLV-RLVEQGR-PVVIFPEGRITVTGSLMKIYDGA 121 (718)
T ss_pred CCH------HHHHHHH-HHHhCCC-EEEEeCCCccCCCCCccCcchHH
Confidence 743 2355555 4578997 89999999999999999999985
No 21
>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins.
Probab=99.75 E-value=3.6e-18 Score=143.07 Aligned_cols=96 Identities=21% Similarity=0.172 Sum_probs=73.0
Q ss_pred CCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHHHHHHHHHHHHHHHH
Q psy15309 151 DNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKLYWRVFDVYVQALVT 230 (258)
Q Consensus 151 ~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ly~~vl~~yi~~ll~ 230 (258)
++|+|+++||+|++|.+++...+...+.+ +.+++++++++.|+ ||+++.+|+++|+|+.... .+++..+. ++
T Consensus 20 ~~~~iiv~NH~S~~D~~~l~~~~~~~~~~-~~~vak~~l~~~p~-g~~~~~~g~i~V~r~~~~~-----~~~~~~~~-l~ 91 (163)
T cd07988 20 PKFVVIGAPHTSNWDFVLGLLAAFALGLK-ISFLGKHSLFKPPL-GPFMRWLGGIPVDRSRAGG-----LVEQVVEE-FR 91 (163)
T ss_pred CceEEEEECCCccHHHHHHHHHHHhcCCc-eEEEEEHHhhhCcH-HHHHHHcCCEEeEcCCccc-----HHHHHHHH-HH
Confidence 47999999999999999887765444433 45677789999999 9999999999999987543 23333333 34
Q ss_pred cCC-ceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 231 SCV-APLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 231 ~g~-~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
+|. .++.||||||||+++ +||.|.
T Consensus 92 ~g~~~~l~IFPEGtR~~~~---~fk~G~ 116 (163)
T cd07988 92 RREEFVLAIAPEGTRSKVD---KWKTGF 116 (163)
T ss_pred hCCCcEEEEeCCCCCCCCc---ChhhHH
Confidence 332 279999999999965 678773
No 22
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins.
Probab=99.73 E-value=7.3e-18 Score=144.26 Aligned_cols=112 Identities=20% Similarity=0.143 Sum_probs=90.4
Q ss_pred ccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCC-CcceeeechhhhhhhHHHHHHHhCCcEEEEcCC
Q psy15309 133 TSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNI-EIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTY 211 (258)
Q Consensus 133 ~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l-~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~ 211 (258)
.++++...|.+++. +++++|+++||+|++|.+++..++...+. ..+.+++++++++.|++||+++..|.+||+|+.
T Consensus 8 ~g~~i~v~G~~~~~---~~~~~iiv~NH~s~~D~~~~~~~~~~~~~~~~~~~v~K~~l~~~p~~g~~~~~~~~i~v~R~~ 84 (193)
T cd07990 8 SGVKVVVYGDEPKL---PKERALIISNHRSEVDWLVLWMLADRFGRLGRLKIVLKDSLKYPPLGGWGWQLGEFIFLKRKW 84 (193)
T ss_pred cCeEEEEEecCccC---CCccEEEEEcCCcccCHHHHHHHHHHcCccceEEeeehhhhhcCChhhHHHhhCeeEEEECCh
Confidence 46777777988762 57899999999999999999998877653 335667788999999999999999999999986
Q ss_pred CCcHHHHHHHHHHHHHHHHc--CCceEEEEeCCccCCCCCCC
Q psy15309 212 GTDKLYWRVFDVYVQALVTS--CVAPLEFFIEGTRSRTGKSL 251 (258)
Q Consensus 212 ~~~~ly~~vl~~yi~~ll~~--g~~~l~iFpEGtRSrtGkl~ 251 (258)
..+. ..+.+.++.+.+. |. ++.|||||||+.+++..
T Consensus 85 ~~d~---~~i~~~~~~l~~~~~~~-~lviFPEGTr~~~~~~~ 122 (193)
T cd07990 85 EKDE---KTIKRQLKRLKDSPEPF-WLLIFPEGTRFTEEKKE 122 (193)
T ss_pred HHhH---HHHHHHHHHHhcCCCCc-EEEEeCcccCCCHHHHH
Confidence 5442 4567777766543 76 89999999999988763
No 23
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.73 E-value=1.2e-17 Score=174.95 Aligned_cols=108 Identities=20% Similarity=0.165 Sum_probs=88.3
Q ss_pred EEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcH
Q psy15309 136 YVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDK 215 (258)
Q Consensus 136 ~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ 215 (258)
++...|.|++++ .++|+|+++||+|++|.+++..++++ .+.+++++++++.|++|++++.+|+|+|||++..
T Consensus 440 ~~~~~g~~~~~~--~~~~~i~~~nH~s~~D~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~-- 511 (1140)
T PRK06814 440 RVEVKGLENLQK--AGKKAVIAANHVSFLDGPLLAAYLPE----EPTFAIDTDIAKAWWVKPFLKLAKALPVDPTNPM-- 511 (1140)
T ss_pred EEEEeCCccccc--cCCCEEEEECCcchHHHHHHHHhCCC----CeEEEEeHHHhhhhHHHHHHHhcCeeecCCCChH--
Confidence 344449998862 24579999999999999999987753 2466777899999999999999999999997542
Q ss_pred HHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 216 LYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 216 ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
.+++.++ .+++|+ +++||||||||++|++.+||.|.
T Consensus 512 ----~~~~~~~-~l~~g~-~~~ifPeGtr~~~~~~~~f~~g~ 547 (1140)
T PRK06814 512 ----ATRTLIK-EVQKGE-KLVIFPEGRITVTGSLMKIYDGP 547 (1140)
T ss_pred ----HHHHHHH-HHHCCC-EEEEeCCCCCCCCCCccccchHH
Confidence 2445454 468997 89999999999999999999984
No 24
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=99.72 E-value=2.2e-17 Score=158.20 Aligned_cols=108 Identities=19% Similarity=0.143 Sum_probs=87.3
Q ss_pred ccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCC
Q psy15309 133 TSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYG 212 (258)
Q Consensus 133 ~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~ 212 (258)
.|+++.++|.|+++.....+++||||||+|++|+++++.++.+ ++|+++ + .++.++++++..+++.++|+..
T Consensus 269 ~G~~v~V~G~e~~P~~~~~~gvL~v~NH~S~lDp~~l~~al~R---~v~~va----y-~~~~ls~ll~~i~avrv~R~r~ 340 (498)
T PLN02499 269 FGGKVIVKGKPPPPASGGNSGVLFVCTHRTLMDPVVLSTVLGR---SIPAVT----Y-SISRLSEILSPIPTVRLTRIRD 340 (498)
T ss_pred cCceEEEEcCCCCCCcCCCCCEEEEeCCCCcccHHHHHHHcCC---ceeehH----h-hHHHHHHHhcccCeeeecCCch
Confidence 4677777799998742233799999999999999999998854 566654 3 4899999999999999999753
Q ss_pred CcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 213 TDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 213 ~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
.+. +.++++|++|. +.|||||||||+|.+++||.|.
T Consensus 341 ~d~-------~air~lL~~G~--lvIFPEGTrsreg~LlrFk~l~ 376 (498)
T PLN02499 341 VDA-------EKIKRELARGD--LVVCPEGTTCREPFLLRFSALF 376 (498)
T ss_pred hHH-------HHHHHHhhCCC--EEEcCCCCCCCCCcccccchhh
Confidence 331 23457889994 9999999999999999999875
No 25
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.71 E-value=3.3e-17 Score=170.82 Aligned_cols=109 Identities=12% Similarity=0.070 Sum_probs=88.1
Q ss_pred EEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCc
Q psy15309 135 VYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTD 214 (258)
Q Consensus 135 i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~ 214 (258)
.++...|.|+++ .++|+|+++||+|++|.+++..++++ + ..+++++++++.|++|++++..|+++|+|+...
T Consensus 427 ~~~~v~g~e~lp---~~~~~i~~~nH~s~~D~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~- 498 (1146)
T PRK08633 427 YRLRVEGRENIP---AKGGALLLGNHVSWIDWALLQAASPR---P-IRFVMERSIYEKWYLKWFFKLFGVIPISSGGSK- 498 (1146)
T ss_pred EEEEEECCcCCC---CCCCEEEEECCCchHHHHHHHHHcCC---C-eEEEeeHHhhhChhHHHHHHHCCEEEecCCChH-
Confidence 344455888875 57899999999999999888777642 2 345677799999999999999999999998632
Q ss_pred HHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 215 KLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 215 ~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
+.++... +.+++|. +|.||||||||++|++.+||.|.
T Consensus 499 ----~~~~~~~-~~l~~g~-~~~ifPeGt~~~~~~~~~~~~g~ 535 (1146)
T PRK08633 499 ----ESLEFIR-KALDDGE-VVCIFPEGAITRNGQLNEFKRGF 535 (1146)
T ss_pred ----HHHHHHH-HHHhCCC-EEEEECCcCCCCCCCccchhHHH
Confidence 3344434 5678997 99999999999999999999984
No 26
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.71 E-value=9e-17 Score=150.84 Aligned_cols=114 Identities=15% Similarity=0.132 Sum_probs=87.0
Q ss_pred cccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhC-CCcceeeechhhhhhhHHHHHHHhCCcEEEEcC
Q psy15309 132 RTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYN-IEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRT 210 (258)
Q Consensus 132 ~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~-l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~ 210 (258)
+.++++...| |+++ +++++|+++||+|++|.+++..+....+ ++...++++++|+++|++||.++.+|.+||+|+
T Consensus 76 ~~gvkv~v~G-e~l~---~~~~~IiiaNH~S~~D~l~l~~l~~r~~~~~~~kfv~K~eL~~iP~~Gw~~~~~g~I~v~R~ 151 (374)
T PLN02510 76 INKTKVVFSG-DKVP---PEERVLLIANHRTEVDWMYLWDLALRKGCLGYIKYVLKSSLMKLPVFGWAFHIFEFIPVERK 151 (374)
T ss_pred hcCeEEEEEe-ecCC---CCCcEEEEECCCchHHHHHHHHHHHhcCCCcccEEEEeHHHhhchHHHHHHHHcCCeeeeCC
Confidence 3577887778 7664 5789999999999999998877665544 234566778899999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHHHHcCC-ceEEEEeCCccCCCCCCCC
Q psy15309 211 YGTDKLYWRVFDVYVQALVTSCV-APLEFFIEGTRSRTGKSLY 252 (258)
Q Consensus 211 ~~~~~ly~~vl~~yi~~ll~~g~-~~l~iFpEGtRSrtGkl~~ 252 (258)
...|. ..+++.++.+.+.+. ..+.|||||||+.+++...
T Consensus 152 ~~~D~---~~l~~~l~~lk~~~~~~~LvIFPEGTR~t~~~~~~ 191 (374)
T PLN02510 152 WEVDE---PNIRQMLSSFKDPRDPLWLALFPEGTDYTEAKCQR 191 (374)
T ss_pred ccccH---HHHHHHHHHHhccCCCcEEEEeCCcCCCCccccch
Confidence 76553 345666665543221 2588999999998887543
No 27
>PLN02833 glycerol acyltransferase family protein
Probab=99.70 E-value=1.1e-16 Score=150.33 Aligned_cols=107 Identities=18% Similarity=0.207 Sum_probs=76.8
Q ss_pred EccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHH-HHHHHhCCcEEEEcCCCCcH
Q psy15309 137 VNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLM-GNMLRGCSAYFMRRTYGTDK 215 (258)
Q Consensus 137 v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~i-g~llr~~GaffI~R~~~~~~ 215 (258)
+...|.++. +++|+|+|+||+|++|.+++..+. +..+++++ +....+++ +++++.+|++||+|+...+.
T Consensus 152 i~v~G~e~~----~~~~~IiVaNH~S~lDi~vL~s~~-----p~~~v~kk-~~~~~~~~~~~~~~~~g~I~VdR~~~~~~ 221 (376)
T PLN02833 152 IKYHGPRPS----RRPKQVFVANHTSMIDFIVLEQMT-----PFAVIMQK-HPGWVGFLQNTILESVGCIWFNRTEAKDR 221 (376)
T ss_pred EEEECCcCC----CCCCEEEEECCCChHHHHHHHhhc-----CceEEEEe-hhhhhHHHHHHHHHHcCcEEecCCCHHHH
Confidence 343476543 467899999999999998887654 23444444 55455665 49999999999999865431
Q ss_pred HHHHHHHHHHHHHHH--cCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 216 LYWRVFDVYVQALVT--SCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 216 ly~~vl~~yi~~ll~--~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
.++.+. +++.++ +|. +|.||||||||.+|.+++||.|.
T Consensus 222 --~~~~~~-l~~~l~~~~G~-~llIFPEGTrs~~~~l~~FK~Ga 261 (376)
T PLN02833 222 --EVVAKK-LRDHVQDPDRN-PLLIFPEGTCVNNEYTVMFKKGA 261 (376)
T ss_pred --HHHHHH-HHHHHHhcCCC-EEEEEcCccccCCCcccccchhh
Confidence 122223 333333 686 99999999999999999999995
No 28
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.
Probab=99.70 E-value=5.6e-17 Score=140.79 Aligned_cols=111 Identities=14% Similarity=0.012 Sum_probs=85.0
Q ss_pred EEccchhhhhhccCCCCCeEEecCCCCc-chHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCc
Q psy15309 136 YVNEEQLNKLRKQWGDNPVLFLPSHRSY-GDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTD 214 (258)
Q Consensus 136 ~v~~~g~e~L~~~~~~~pvV~v~nHrS~-lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~ 214 (258)
++...|.|+|+ +++|+|+++||+|. +|.+++..++...+- ...++++.++++.|+++++ .++|+|.....
T Consensus 9 ~v~v~G~e~lp---~~g~~iiv~NH~s~~~D~~~l~~~~~~~~~-~~~~lak~~l~~~p~l~~~-----~i~v~r~~~~~ 79 (210)
T cd07986 9 EVDVSGLENIP---KDGPVVIVANHPFGILDGLILADLLGSVRP-DVRILANQLLSKIPELRDL-----FIPVDPLEGRA 79 (210)
T ss_pred EEecCchhcCC---CCCCEEEEEcCCccchHHHHHHHHHHHhCC-CeEEEeHHhhhhCcchHhh-----EEeccCCCCcc
Confidence 56666999985 57899999999975 999988776654332 3456777799899999887 58999986542
Q ss_pred --HHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCC------CCCCCCCC
Q psy15309 215 --KLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGK------SLYPKLDT 257 (258)
Q Consensus 215 --~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGk------l~~pK~Gl 257 (258)
....+.+++..+ .+++|. +++||||||||++|. +.++|.|.
T Consensus 80 ~~~~~~~~~~~~~~-~L~~G~-~l~IFPEGtrs~~~~~~g~~~~~~fk~G~ 128 (210)
T cd07986 80 ALAKNRESLREALR-HLKNGG-ALIIFPAGRVSTASPPFGRVSDRPWNPFV 128 (210)
T ss_pred hhhhhHHHHHHHHH-HHhCCC-EEEEECCcccccccccCCccccCCccHHH
Confidence 112356777665 578996 899999999999975 57898874
No 29
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT. Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB).
Probab=99.69 E-value=6.9e-17 Score=142.15 Aligned_cols=96 Identities=17% Similarity=0.113 Sum_probs=74.2
Q ss_pred CCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhh-------hhhHHHHHHHhCCcEEEEcCCC---------
Q psy15309 149 WGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFH-------SMFLMGNMLRGCSAYFMRRTYG--------- 212 (258)
Q Consensus 149 ~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~-------~~p~ig~llr~~GaffI~R~~~--------- 212 (258)
+++++||++|||+|++|+.++.+++.+ +.+++| ++++| ..|+++++++..|+|+|+|+..
T Consensus 19 p~~~~vIl~sNH~S~~Dp~ii~~~~~r---~~~~lA-k~~lf~ag~~~~~~pl~~~f~~~~~~~pV~r~k~~~~~P~~~~ 94 (235)
T cd07985 19 AQGHNVVLLANHQTEADPAVISLLLEK---THPYLA-ENMIYVAGDRVVSDPLCKPFSMGRNLLCVHSKKHIDDPPELKE 94 (235)
T ss_pred cCCCCEEEEECCcccccHHHHHHHhcc---ccHHHh-hhhheeccccccccHhHHHHHhhCCceeeecCcccccchhhhh
Confidence 368999999999999999999999874 334443 33444 7899999999999999999862
Q ss_pred ----CcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCC---CCCCCC
Q psy15309 213 ----TDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSR---TGKSLY 252 (258)
Q Consensus 213 ----~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSr---tGkl~~ 252 (258)
.+ .++++..+ ++|++|...+|||||||||| +|+..|
T Consensus 95 ~k~~~~---~~alk~~~-~lLk~G~~~i~IfPEGtR~r~~~~g~~~p 137 (235)
T cd07985 95 EKMKAN---LATLKEMQ-QLLNEGGQLIWVAPSGGRDRPDANGEWYP 137 (235)
T ss_pred hhhhcc---HHHHHHHH-HHHHcCCeEEEEcCCCCCCCCCCCCCccC
Confidence 22 25677755 57888863489999999998 455444
No 30
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.67 E-value=5.5e-16 Score=145.60 Aligned_cols=118 Identities=19% Similarity=0.171 Sum_probs=89.8
Q ss_pred HhcccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhC-CCcceeeechhhhhhhHHHHHHHhCCcEEEE
Q psy15309 130 KTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYN-IEIPCVAAGMDFHSMFLMGNMLRGCSAYFMR 208 (258)
Q Consensus 130 ~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~-l~~p~iaag~~l~~~p~ig~llr~~GaffI~ 208 (258)
+.+.|+++.+.|-+...+...+.++|+++||+|++|.+++..++.+.| ++-+.+++++++..+|++||.++.+|.+||+
T Consensus 62 ~~~~Gvkv~V~gd~~~~~~~g~e~~lIisNHqS~~D~l~l~~l~~r~~~l~~~~~vlKkeL~~iPv~Gw~~~~~~~IfId 141 (376)
T PLN02380 62 DWWAGVKVQLYADEETFELMGKEHALVISNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYVFLE 141 (376)
T ss_pred HHcCCeEEEEEecchhhccCCCCcEEEEECCChhHHHHHHHHHhhhcccccceeEeeHHHhhhccHHHHHHHHcCCEEec
Confidence 345688888776544322224568999999999999998877765533 3445677788999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHH--cCCceEEEEeCCccCCCCCCC
Q psy15309 209 RTYGTDKLYWRVFDVYVQALVT--SCVAPLEFFIEGTRSRTGKSL 251 (258)
Q Consensus 209 R~~~~~~ly~~vl~~yi~~ll~--~g~~~l~iFpEGtRSrtGkl~ 251 (258)
|+.+.| ...+++..+.+.+ .|. .+.|||||||...+++.
T Consensus 142 R~~~~d---~~~l~~~~~~l~~~~~~~-wllIFPEGTR~~~~k~~ 182 (376)
T PLN02380 142 RSWAKD---ENTLKSGFQRLKDFPRPF-WLALFVEGTRFTQAKLL 182 (376)
T ss_pred CCchhH---HHHHHHHHHHHhhCCCcc-EEEEecCcCCCCchhhH
Confidence 998766 3567777766543 254 69999999999998753
No 31
>smart00563 PlsC Phosphate acyltransferases. Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.
Probab=99.63 E-value=2.3e-15 Score=116.44 Aligned_cols=99 Identities=29% Similarity=0.300 Sum_probs=82.9
Q ss_pred eEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCC
Q psy15309 154 VLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKLYWRVFDVYVQALVTSCV 233 (258)
Q Consensus 154 vV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ly~~vl~~yi~~ll~~g~ 233 (258)
+|+++||.|.+|.+++.+++...+ ..+.+++++++++.|+++++++..|+++|+|+... .....++++++ .+++|.
T Consensus 1 ~i~v~NH~s~~D~~~l~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~~~~~--~~~~~~~~~~~-~l~~~~ 76 (118)
T smart00563 1 ALVVANHQSFLDPLVLSALLPRKG-GRVRFVAKKELFYVPLLGWLLRLLGAIFIDRENGR--LARAALREAVR-LLRDGG 76 (118)
T ss_pred CEEEECCCchHHHHHHHHHccccc-CceEEEeHHHHhhccHHHHHHHHCCCeEEeCCCcH--HHHHHHHHHHH-HHhCCC
Confidence 489999999999999999887654 33566777788899999999999999999997652 34567888776 567885
Q ss_pred ceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 234 APLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 234 ~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
++++||||+|++++++.+++.|.
T Consensus 77 -~~~ifPeG~~~~~~~~~~~~~g~ 99 (118)
T smart00563 77 -WLLIFPEGTRSRPGKLLPFKKGA 99 (118)
T ss_pred -EEEEeCCcccCCCCCcCCCcccH
Confidence 89999999999999999999985
No 32
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=99.63 E-value=9e-16 Score=147.11 Aligned_cols=107 Identities=18% Similarity=0.089 Sum_probs=79.9
Q ss_pred cEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCC
Q psy15309 134 SVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGT 213 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~ 213 (258)
++++...|-. .+....++|+|++|||+|++|++++.+.+... +++++ .+++|+++|+++..|+++|+|+...
T Consensus 310 Gvrl~v~g~~-p~~~~~~~gvI~V~NH~S~LDPi~L~~Al~rr--~I~~m-----tFsip~lg~lL~~i~ti~VdRdr~~ 381 (525)
T PLN02588 310 GIHLTLTVND-LISSDRKKGCLFVCNHRTLLDPLYISYALRKK--NIKAV-----TYSLSRLSELLAPIKTVRLTRDRVK 381 (525)
T ss_pred CcEEEEEeCC-CCCCCCCCCEEEEECCcchhhHHHHHHHcccC--cceEE-----EEEhHHHHHHHHhcCceeecCCCcc
Confidence 5555544332 11222457999999999999999998888421 23333 3467999999999999999998754
Q ss_pred cHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 214 DKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 214 ~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
+. +.+.+++++|. +.||||||||++|.+++||.|+
T Consensus 382 D~-------~aI~~LLk~Gd--lVIFPEGTRsr~g~LlrFk~l~ 416 (525)
T PLN02588 382 DG-------QAMEKLLSQGD--LVVCPEGTTCREPYLLRFSPLF 416 (525)
T ss_pred hH-------HHHHHHHhCCC--EEEccCccccCCCcccChhhhH
Confidence 42 22367888885 7899999999999999999875
No 33
>PLN02783 diacylglycerol O-acyltransferase
Probab=99.63 E-value=1.3e-15 Score=140.33 Aligned_cols=108 Identities=10% Similarity=-0.038 Sum_probs=80.1
Q ss_pred ccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCC--cceeeechhhhhhhHHHHHHHhCCcEEEEcC
Q psy15309 133 TSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIE--IPCVAAGMDFHSMFLMGNMLRGCSAYFMRRT 210 (258)
Q Consensus 133 ~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~--~p~iaag~~l~~~p~ig~llr~~GaffI~R~ 210 (258)
.++++..+|.|+++ +++++||++||+|++|..++.+.-...-++ ..++.++++++++|++|++++.+|+++|+|+
T Consensus 85 ~~~~v~v~g~e~l~---~~~~~I~~~nH~S~ldi~~~~~~~~~~~~p~~~~~~lak~~lf~iP~~g~~~~~~G~ipv~R~ 161 (315)
T PLN02783 85 FPVRLHVEDEEAFD---PNRAYVFGYEPHSVLPIGVIALADLSGFLPLPKIRALASSAVFYTPFLRHIWTWLGLDPASRK 161 (315)
T ss_pred cCeEEEEEchhhCC---CCCCEEEEECCCcchhhHHHhhhhhhhccCCCchHHHhhhhhccCcHHHHHHHHcCCeEEcHH
Confidence 35777777999885 688999999999999987643321110011 2345667799999999999999999999996
Q ss_pred CCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccC-------CCCCCCCCCCCC
Q psy15309 211 YGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRS-------RTGKSLYPKLDT 257 (258)
Q Consensus 211 ~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRS-------rtGkl~~pK~Gl 257 (258)
+ ..+++++|. +++|||||||+ +++..+++|.|.
T Consensus 162 ~-------------~~~~Lk~G~-sv~IfPeGtre~~~~~~~~~~~~~~~k~G~ 201 (315)
T PLN02783 162 N-------------FTSLLKAGY-SCIIVPGGVQECLYMEHGSEVAYLKSRKGF 201 (315)
T ss_pred H-------------HHHHHhCCC-EEEEEcCCchhhcccCCCccccccCCCCcH
Confidence 2 124678996 99999999983 333456788884
No 34
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=99.61 E-value=1.7e-15 Score=146.91 Aligned_cols=108 Identities=20% Similarity=0.168 Sum_probs=82.2
Q ss_pred ccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCC
Q psy15309 133 TSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYG 212 (258)
Q Consensus 133 ~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~ 212 (258)
.||++.+.|.|+++....++++||+|||+|++|++++...+.. ++++++. .+..++++++..|+++|+|+..
T Consensus 282 ~Gv~v~v~G~e~~p~~~~~~~~l~v~NHqS~lD~~~l~~al~~---~~~~v~~-----~~~~l~~~l~~i~~~~ldR~r~ 353 (497)
T PLN02177 282 LGIRLIVKGNPPPPPKKGQPGVLFVCNHRTVLDPVVTAVALGR---KISCVTY-----SISKFSELISPIKAVALSRERE 353 (497)
T ss_pred cCcEEEEEcCCCCCcccCCCCeEEEECCCCcchHHHHHHHcCC---CeEEEee-----hHHHHHHHHHhcCEEEEeCCCh
Confidence 4788888899887522124799999999999999998887742 4555541 2445799999999999999754
Q ss_pred CcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 213 TDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 213 ~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
++. . .++.++++| .+.||||||||++|.+++||.|.
T Consensus 354 ~~~---~----~~~~lL~~g--~lvIFPEGTrs~~~~l~~Fk~~f 389 (497)
T PLN02177 354 KDA---A----NIKRLLEEG--DLVICPEGTTCREPFLLRFSALF 389 (497)
T ss_pred HHH---H----HHHHHHhcC--CEEECcCcCCCCCCCcchHHHHH
Confidence 331 1 244678887 38899999999999999998763
No 35
>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.
Probab=99.59 E-value=1.6e-15 Score=131.41 Aligned_cols=102 Identities=18% Similarity=0.113 Sum_probs=79.0
Q ss_pred EEccchhhhhhccCCCCCeEEecCCCCcc-hHHHHHHH-Hh-hhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCC
Q psy15309 136 YVNEEQLNKLRKQWGDNPVLFLPSHRSYG-DFILMALL-CF-HYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYG 212 (258)
Q Consensus 136 ~v~~~g~e~L~~~~~~~pvV~v~nHrS~l-D~lll~~~-l~-~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~ 212 (258)
+|. |.|+++ .++|+|+++||.|++ |.+++..+ +. ..+.+ +++.++.+++..|+++++++.+|+++++|+.
T Consensus 9 ~v~--g~e~lp---~~~~~i~v~NH~s~~~D~~~l~~~~~~~~~~~~-~~~la~~~~~~~p~~~~~~~~~g~i~~~r~~- 81 (212)
T cd07987 9 EVR--GLENIP---DEGPALLVHPHGGLPIDGALLAAAFLLLFPGRL-PRALADHFLFPLPGLRDLLRRLGAVPGSREN- 81 (212)
T ss_pred EEe--ccccCC---CCCcEEEEECCcchhHHHHHHHHHHHHhCCCCe-eEEeecccceeCccHHHHHHHcCCcccCHHH-
Confidence 565 888885 568999999999998 99999876 21 22333 3455577888999999999999999988741
Q ss_pred CcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCC-------CCCCCCCCCC
Q psy15309 213 TDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRT-------GKSLYPKLDT 257 (258)
Q Consensus 213 ~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrt-------Gkl~~pK~Gl 257 (258)
..+++++|. +|.|||||||+.. +.++++|.|+
T Consensus 82 ------------~~~~L~~G~-~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~ 120 (212)
T cd07987 82 ------------CVRLLREGE-LVLIFPGGAREALKSKREEYYLLWKKRKGF 120 (212)
T ss_pred ------------HHHHhcCCC-EEEEEcCCHHHHhccCCCeEEEEECCCcCH
Confidence 234567996 8999999999753 2378899884
No 36
>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis. Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p
Probab=99.50 E-value=1.3e-13 Score=115.92 Aligned_cols=113 Identities=19% Similarity=0.183 Sum_probs=80.7
Q ss_pred cEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhh-hCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCC
Q psy15309 134 SVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFH-YNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYG 212 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~-~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~ 212 (258)
.++++..|.|+++ .++|+|+++||.|++|.+++.+.+.. .+.+ +.+++..... + ++++++..|+++|+|+..
T Consensus 11 ~~~~~~~g~~~~p---~~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~~~~~g~~~i~r~~~ 83 (187)
T cd06551 11 FVRLEVKGPPPPP---GGGPVLFVSNHSSWWDGLILFLLLERGLRRD-VYGLMDEELL--E-RYPFFTRLGAFSVDRDSP 83 (187)
T ss_pred eEEEEEeccccCC---CCCCEEEEEcchhhHHHHHHHHHHHhccCCC-eEEEEcHhhh--h-hChHHhhcCeEEecCCCh
Confidence 4566666999986 57899999999999999998887752 1222 3344443332 1 455556669999999765
Q ss_pred CcHHHHHHHHHHHHHHHHc-CCceEEEEeCCccCCCC-CCCCCCCCC
Q psy15309 213 TDKLYWRVFDVYVQALVTS-CVAPLEFFIEGTRSRTG-KSLYPKLDT 257 (258)
Q Consensus 213 ~~~ly~~vl~~yi~~ll~~-g~~~l~iFpEGtRSrtG-kl~~pK~Gl 257 (258)
.. ....++..+ +.+++ |. +++|||||+|++.+ ++.+++.|+
T Consensus 84 ~~--~~~~~~~~~-~~l~~~g~-~v~ifPeG~~~~~~~~~~~~~~g~ 126 (187)
T cd06551 84 RS--AAKSLKYVA-RLLSKPGS-VVWIFPEGTRTRRDKRPLQFKPGV 126 (187)
T ss_pred hh--HHHHHHHHH-HHHhcCCc-EEEEeCCcccCCCCCCcccccchH
Confidence 32 124455544 56778 86 89999999999988 888888874
No 37
>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins.
Probab=99.45 E-value=2e-13 Score=115.94 Aligned_cols=111 Identities=8% Similarity=-0.010 Sum_probs=79.8
Q ss_pred cEEEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCC
Q psy15309 134 SVYVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYG 212 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~ 212 (258)
.++++.+|.|+++++. +++|+|+++||+|.+|..++... +.++.+ ++... +..|+++++++.+|+++|+|+..
T Consensus 7 ~~~~~v~g~e~l~~~~~~~~~~I~~~~H~s~l~~~~~~~~----~~~~~~-v~~~~-~~~~~~~~~~~~~g~~~i~r~~~ 80 (189)
T cd07983 7 TLRWRVIGDESADALIAQGEPVILAFWHGRLLLMPYLFRR----RKRIAA-LISRS-KDGEIIARVLERLGIRVVRGSSS 80 (189)
T ss_pred eEeEEEeCchhhhhhccCCCCEEEEEeCchHHHhHHHhcc----CCCeEE-EEecC-cCHHHHHHHHHHhCCCEEEcCCC
Confidence 3455556999987543 36899999999999998776432 334333 34434 35799999999999999999765
Q ss_pred CcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 213 TDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 213 ~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
... ...+++.++ .+++|. +|+|||||||++. .++|.|.
T Consensus 81 ~~~--~~~~~~~~~-~lk~g~-~v~ifpeG~r~~~---~~~~~G~ 118 (189)
T cd07983 81 RGG--AAALREMLR-ALKDGY-NIAITPDGPRGPR---YKVKPGV 118 (189)
T ss_pred CcH--HHHHHHHHH-HHhCCC-EEEEcCCCCCCcc---eecchHH
Confidence 432 255777665 567896 8999999998654 4567663
No 38
>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.
Probab=99.36 E-value=6.3e-12 Score=105.50 Aligned_cols=111 Identities=24% Similarity=0.294 Sum_probs=85.4
Q ss_pred cEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCC
Q psy15309 134 SVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGT 213 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~ 213 (258)
.++++ |.++++ ++.|+|+++||.|.+|.+++..++ +.+ ..++++...++.|+++++++..|+++++|....
T Consensus 11 ~v~v~--~~~~~~---~~~~~i~~~nH~~~~D~~~~~~~~---~~~-~~~v~~~~~~~~~~~~~~~~~~g~~~v~~~~~~ 81 (184)
T cd07989 11 RVRVE--GLENLP---PKGPVIIVANHQSYLDPLVLGAAL---PRP-IRFVAKKELFKIPFLGWLLRLLGAIPIDRGNGR 81 (184)
T ss_pred EEEEE--ccccCC---CCCCEEEEECCcchHHHHHHHhhc---cCc-eEEEEhHHhhhCchHHHHHHHCCeEEEecCCch
Confidence 34544 888875 678999999999999998776654 223 345566565578999999999999999987642
Q ss_pred cHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCCCCCC
Q psy15309 214 DKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYPKLDT 257 (258)
Q Consensus 214 ~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~pK~Gl 257 (258)
.. ...+++.+ +++++|. .+++||||+++..|+..+++.|.
T Consensus 82 ~~--~~~~~~~~-~~l~~g~-~l~i~peg~~~~~~~~~~~~~g~ 121 (184)
T cd07989 82 SA--REALREAI-EALKEGE-SVVIFPEGTRSRDGELLPFKSGA 121 (184)
T ss_pred hH--HHHHHHHH-HHHHCCC-EEEEecCcccCCCCCcCCCcccH
Confidence 11 24566655 4578886 89999999999999999999884
No 39
>KOG1505|consensus
Probab=99.00 E-value=1.3e-09 Score=101.69 Aligned_cols=92 Identities=18% Similarity=0.222 Sum_probs=71.6
Q ss_pred CCCCeEEecCCCCcchHHHHHHHHhhhCC-CcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHHHHHHHHHHHHHH
Q psy15309 150 GDNPVLFLPSHRSYGDFILMALLCFHYNI-EIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKLYWRVFDVYVQAL 228 (258)
Q Consensus 150 ~~~pvV~v~nHrS~lD~lll~~~l~~~~l-~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ly~~vl~~yi~~l 228 (258)
.+.++|+++||||.+|-+.+..++-+.|. .--.++.++.|...|++||.++..|-||++|+...|. +.+.+..+.+
T Consensus 69 ~~e~alli~NH~~~~Dwl~~w~~~~~~G~l~~~~~~lK~~lk~~Pi~Gw~~~~~~fiFl~R~~~~d~---~~l~~~~k~l 145 (346)
T KOG1505|consen 69 GKERALLIANHQSEVDWLYLWTYAQRKGVLGNVKIVLKKSLKYLPIFGWGMWFHGFIFLERNWEKDE---KTLISLLKHL 145 (346)
T ss_pred CCCceEEEeccccccchhhHHHHHhcCCchhhhhHHHhhHHHhCcchheeeeecceEEEecchhhhH---HHHHHHHHHh
Confidence 46799999999999999888866666664 1234566778888999999999999999999988774 5666666665
Q ss_pred HHcCC-ceEEEEeCCcc
Q psy15309 229 VTSCV-APLEFFIEGTR 244 (258)
Q Consensus 229 l~~g~-~~l~iFpEGtR 244 (258)
..... -.+.+||||||
T Consensus 146 ~~~~~~~wLlLFPEGT~ 162 (346)
T KOG1505|consen 146 KDSPDPYWLLLFPEGTR 162 (346)
T ss_pred ccCCCceEEEEecCCCc
Confidence 43332 25899999995
No 40
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins.
Probab=98.86 E-value=1e-08 Score=86.62 Aligned_cols=94 Identities=15% Similarity=0.188 Sum_probs=67.4
Q ss_pred chhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHH----hCCcEEEEcCCCCc
Q psy15309 140 EQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLR----GCSAYFMRRTYGTD 214 (258)
Q Consensus 140 ~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr----~~GaffI~R~~~~~ 214 (258)
+|.|+++++. +++|+|+++||.|++|.+...... .+.++ .++.+ .. ..|+++++++ ..|+.+|+|+ .
T Consensus 7 ~~~e~l~~~~~~~~~~il~~~H~g~~e~~~~~~~~--~~~~~-~~v~~-~~-~~~~~~~~~~~~r~~~g~~~i~~~---~ 78 (192)
T cd07984 7 EGLEHLEAALAKGKGVILLTAHFGNWELAGLALAL--LGYPV-TVVYR-PL-KNPLLDRLITRGRERFGARLIPRG---G 78 (192)
T ss_pred cCHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHh--cCCCe-eEEEE-CC-CCHHHHHHHHHHHHhcCCeeEcCC---c
Confidence 3788876543 357999999999999987765554 23343 33444 33 5688888887 4699999986 1
Q ss_pred HHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCC
Q psy15309 215 KLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTG 248 (258)
Q Consensus 215 ~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtG 248 (258)
.+++.++ .+++|. .++|||||+|++++
T Consensus 79 -----~~~~~~~-~l~~g~-~v~i~pD~~~~~~~ 105 (192)
T cd07984 79 -----GLRELIR-ALKKGE-IVGILPDQDPGRKG 105 (192)
T ss_pred -----hHHHHHH-HHhCCC-EEEEEeCCCCCCCC
Confidence 2444454 577896 89999999999885
No 41
>KOG2847|consensus
Probab=98.66 E-value=3e-08 Score=87.59 Aligned_cols=118 Identities=18% Similarity=0.115 Sum_probs=84.9
Q ss_pred cccEEEccchhhhhhcc----CCCCCeEEecCCCCcchHHHHHHHHhh------hCCCcceeeechhhhhhhHHHHHHHh
Q psy15309 132 RTSVYVNEEQLNKLRKQ----WGDNPVLFLPSHRSYGDFILMALLCFH------YNIEIPCVAAGMDFHSMFLMGNMLRG 201 (258)
Q Consensus 132 ~~~i~v~~~g~e~L~~~----~~~~pvV~v~nHrS~lD~lll~~~l~~------~~l~~p~iaag~~l~~~p~ig~llr~ 201 (258)
+....|. +.|.+-++ +++.|.|=|+||.|.+|-.+++..|.- .++.- ..||.+--|..|+...+++.
T Consensus 47 ~Nk~~v~--n~e~l~~l~~~Rp~n~PLiTVSNH~S~vDDP~~W~~L~~~~f~~~~~~RW-tlaAhdICF~n~~~S~fFsl 123 (286)
T KOG2847|consen 47 YNKLLVH--NRETLTALLESRPPNRPLITVSNHMSCVDDPLVWGILKLRLFLNLKNIRW-TLAAHDICFTNPFHSNFFSL 123 (286)
T ss_pred ccccccc--cHHHHHHHHHcCCCCCCeEEEecchhccCCceeEEEechhhhcchhhhhe-ehhhhhchhccHHHHHHHhc
Confidence 4445555 55554433 467899999999999986555443321 11111 22444445678999999999
Q ss_pred CCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCC-CCCCCCCCC
Q psy15309 202 CSAYFMRRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTG-KSLYPKLDT 257 (258)
Q Consensus 202 ~GaffI~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtG-kl~~pK~Gl 257 (258)
..+++|-|+.+ .|...+...++. +..|. .|-|||||.+++.+ .++.+|-|+
T Consensus 124 GkclPi~RG~G---vYQ~gmd~~i~k-Ln~g~-WVHiFPEGkV~q~~~~~~rfKWGi 175 (286)
T KOG2847|consen 124 GKCLPIVRGEG---VYQKGMDFAIEK-LNDGS-WVHIFPEGKVNQMEKEMLRFKWGI 175 (286)
T ss_pred CceEeeeccCc---cccccHHHHHHh-cCCCC-eEEECCCceeeccccchhheeccc
Confidence 99999999754 577788888875 67887 99999999999655 478899886
No 42
>PLN02349 glycerol-3-phosphate acyltransferase
Probab=98.58 E-value=9.2e-07 Score=82.99 Aligned_cols=97 Identities=19% Similarity=0.136 Sum_probs=59.9
Q ss_pred CCCCCeEEecCCCCcchHHHHHHHHhhhC----CCcceeeechhhhhhhHHHHH--HHhCCcEEEEcCCCCcHHHH----
Q psy15309 149 WGDNPVLFLPSHRSYGDFILMALLCFHYN----IEIPCVAAGMDFHSMFLMGNM--LRGCSAYFMRRTYGTDKLYW---- 218 (258)
Q Consensus 149 ~~~~pvV~v~nHrS~lD~lll~~~l~~~~----l~~p~iaag~~l~~~p~ig~l--lr~~GaffI~R~~~~~~ly~---- 218 (258)
.++.+||+++||||..|+.++.+++.... -.+.+ +||+-...-|....+ -|.+=|++-++...+++-.+
T Consensus 198 ~~g~nVvllsNHQseaDp~ii~llle~~~p~iae~~iy-vAGdrv~~DpL~~PFSmGrNLlCVySKKhm~d~Pelke~K~ 276 (426)
T PLN02349 198 QQGHNVVLLSNHQSEADPAVIALLLEKSHPYLAENVTY-VAGDRVVTDPLCKPFSMGRNLICVHSKKHMNDDPELKEMKR 276 (426)
T ss_pred hcCCCEEEEeccccccchHHHHHHHhccCHHHHhhhhh-hccceEeeccccCccccCCceEEEEeccccCCChhhHHHHH
Confidence 36789999999999999999988775421 11222 344322222333322 23344677777765443221
Q ss_pred ----HHHHHHHHHHHHcCCceEEEEeCCccCCC
Q psy15309 219 ----RVFDVYVQALVTSCVAPLEFFIEGTRSRT 247 (258)
Q Consensus 219 ----~vl~~yi~~ll~~g~~~l~iFpEGtRSrt 247 (258)
..|++.. .+|++|...+||||||||+|-
T Consensus 277 ~~N~kslk~~~-~lL~~Gg~~iwIaPsGgRdR~ 308 (426)
T PLN02349 277 KANTRTLKEMA-LLLREGGQLIWIAPSGGRDRP 308 (426)
T ss_pred HHHHHHHHHHH-HHHhcCCeEEEEeCCCCCCCC
Confidence 3455544 567785558999999999983
No 43
>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed
Probab=96.82 E-value=0.026 Score=51.33 Aligned_cols=103 Identities=10% Similarity=0.187 Sum_probs=63.4
Q ss_pred ccEEEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHH----hCCcEEE
Q psy15309 133 TSVYVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLR----GCSAYFM 207 (258)
Q Consensus 133 ~~i~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr----~~GaffI 207 (258)
..+++. |.|++.++. +++++|++++|.+++|......... +.++.. ++. .+ +.|.+..++. ..|.-.|
T Consensus 95 ~~v~i~--g~e~l~~a~~~g~gvI~~t~H~GnwE~~~~~l~~~--~~~~~~-v~~-~~-~n~~~~~~~~~~R~~~g~~~i 167 (298)
T PRK08419 95 NKVTFI--NEENLLDALKKKRPIIVTTAHYGYWELFSLALAAY--YGAVSI-VGR-LL-KSAPINEMISKRREQFGIELI 167 (298)
T ss_pred CcEEEE--CHHHHHHHHHcCCCEEEEeeCccHHHHHHHHHHhc--CCCeEE-EEe-CC-CChHHHHHHHHHHHHcCCeeE
Confidence 345665 889887654 4789999999999999876544332 223323 333 33 3477766655 3565566
Q ss_pred EcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCc-cCCCCCCCC
Q psy15309 208 RRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGT-RSRTGKSLY 252 (258)
Q Consensus 208 ~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGt-RSrtGkl~~ 252 (258)
... ..+++.++ .+++|. .+++++... .+.+|...+
T Consensus 168 ~~~--------~~~r~~l~-~Lk~g~-~v~il~Dq~~~~~~gv~v~ 203 (298)
T PRK08419 168 DKK--------GAMKELLK-ALKQGR-ALGILVDQNVVPKEGVEVK 203 (298)
T ss_pred ECc--------cHHHHHHH-HHHcCC-eEEEEecCCCCCCCCeEEe
Confidence 321 12455554 567886 899999543 334555443
No 44
>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=96.66 E-value=0.027 Score=51.36 Aligned_cols=104 Identities=14% Similarity=0.064 Sum_probs=62.5
Q ss_pred chhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeec--hhhhhhhHHHHHHHhCCcEEEEcCCCCcHH
Q psy15309 140 EQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAG--MDFHSMFLMGNMLRGCSAYFMRRTYGTDKL 216 (258)
Q Consensus 140 ~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag--~~l~~~p~ig~llr~~GaffI~R~~~~~~l 216 (258)
+|.|++.++. ++.++|+++.|.+++|....... .++.++..++.. ...+. .++..+-.+.|.-.|..+.+..
T Consensus 95 ~g~e~l~~a~~~gkgvIllt~H~GnwE~~~~~l~--~~~~~~~~vyr~~~n~~~~-~~~~~~R~~~g~~~i~~~~~~~-- 169 (298)
T PRK07920 95 EGLEHLDAALAAGRGVVLALPHSGNWDMAGAWLV--QHHGPFTTVAERLKPESLY-ERFVAYRESLGFEVLPLTGGER-- 169 (298)
T ss_pred CCHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHH--HcCCCeEEEEeccCCHHHH-HHHHHHHHhcCCEEEecCCCCc--
Confidence 4888887653 46899999999999998654322 234444333322 11111 2333444456766664332211
Q ss_pred HHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCC
Q psy15309 217 YWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLY 252 (258)
Q Consensus 217 y~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~ 252 (258)
..+++.++ .+++|. .++|.|......+|...|
T Consensus 170 --~~~r~ii~-~Lk~g~-~v~il~Dq~~~~~g~~v~ 201 (298)
T PRK07920 170 --PPFEVLAE-RLRAGG-VVCLLADRDLTRSGVEVD 201 (298)
T ss_pred --hHHHHHHH-HHHcCC-eEEEEeccCccCCCCEEe
Confidence 23556665 467896 899999998766665444
No 45
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.91 E-value=0.74 Score=42.61 Aligned_cols=98 Identities=11% Similarity=0.047 Sum_probs=65.6
Q ss_pred ccchhhhhhccCC-CCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHh----CCcEEEEcCCC
Q psy15309 138 NEEQLNKLRKQWG-DNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSAYFMRRTYG 212 (258)
Q Consensus 138 ~~~g~e~L~~~~~-~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~----~GaffI~R~~~ 212 (258)
..+|+|++.++.. +.++|++.-|..++|.....+.- ++. ++++..... +.|.+-+++.. .|.=.|+++.
T Consensus 108 ~v~g~e~l~e~l~~~~gvIl~~~H~gn~E~~~~~l~~--~~~--~~~~~yrp~-~np~ld~~i~~~R~r~~~~~~~~~~- 181 (308)
T COG1560 108 EVEGLEHLEEALANGRGVILVTPHFGNWELGGRALAQ--QGP--KVTAMYRPP-KNPLLDWLITRGRERFGGRLLPRKG- 181 (308)
T ss_pred eecCHHHHHHHHHcCCCEEEEecCcchHHHHHHHHHH--hCC--CeeEEecCC-CCHHHHHHHHHHHHhcCCcccCCCc-
Confidence 3449999987754 67999999999999987765543 232 224444443 56888777654 3434455432
Q ss_pred CcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCC
Q psy15309 213 TDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGK 249 (258)
Q Consensus 213 ~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGk 249 (258)
..++..++. +++|. .+++-|+--.++.+.
T Consensus 182 ------~~ir~li~~-Lk~G~-~v~~lpDqd~~~~~~ 210 (308)
T COG1560 182 ------EGIRQLIKA-LKQGE-AVGYLPDQDYGPGES 210 (308)
T ss_pred ------hhHHHHHHH-HhcCC-eEEEecCcccCCCCC
Confidence 235566765 67997 899999877766655
No 46
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria. Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane
Probab=94.59 E-value=1.2 Score=40.23 Aligned_cols=94 Identities=11% Similarity=0.067 Sum_probs=59.3
Q ss_pred EEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHH----HhCCcEEEEcC
Q psy15309 136 YVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNML----RGCSAYFMRRT 210 (258)
Q Consensus 136 ~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~ll----r~~GaffI~R~ 210 (258)
.++.+|.|++.++. .+.++|+++.|-.++|....... ..+.++..+.. .. +.|.+..++ ...|.-.|..+
T Consensus 104 ~~~~~g~e~l~~a~~~g~gvIl~t~H~GnwE~~~~~l~--~~~~~~~~i~~--~~-~n~~~~~~~~~~R~~~g~~~i~~~ 178 (295)
T PF03279_consen 104 RVEIEGEEHLEAALAEGRGVILLTGHFGNWELAGRALA--RRGPPVAVIYR--PQ-KNPYIDRLLNKLRERFGIELIPKG 178 (295)
T ss_pred EEEEECHHHHHHHHhcCCCCEEeCcCcChHHHHHHHHH--hhCCceEEEec--CC-ccHhHHHHHHHHHHhcCCeEecch
Confidence 44455999998654 47899999999999997554333 23434333322 22 335555443 45777777754
Q ss_pred CCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCcc
Q psy15309 211 YGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTR 244 (258)
Q Consensus 211 ~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtR 244 (258)
.+ +.+.++ .+++|. .|.+.+...-
T Consensus 179 ~~--------~~~~~~-~Lk~g~-~v~~l~Dq~~ 202 (295)
T PF03279_consen 179 EG--------IRELIR-ALKEGG-IVGLLGDQDP 202 (295)
T ss_pred hh--------HHHHHH-HhccCC-EEEEEECCCC
Confidence 22 344454 568896 8999988643
No 47
>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=92.03 E-value=1.8 Score=39.38 Aligned_cols=137 Identities=12% Similarity=-0.004 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHH
Q psy15309 94 KEQIRLQVLDILNEIGYGRSLTVVRWLGLLLVKILKKTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLC 173 (258)
Q Consensus 94 ~~~~~~~a~~il~em~~~~~~~~~r~~~~~l~~~~~~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l 173 (258)
.+++++-+++....++..+-.. .+. +.... ..+-..+.+. |.+++..+ ++.++|++.-|-.++|........
T Consensus 59 ~~e~~~i~r~~~~~~~~~~~E~-~~~--~~~~~--~~l~~~~~~~--g~~~~~~~-~gkgvI~~t~H~GnWEl~~~~~~~ 130 (293)
T PRK06946 59 DARREELARRHFRHVIRSYVER-SVQ--WFGSE--KKLEKLVQVD--SAIDLTDP-DGPPTIFLGLHFVGIEAGSIWLNY 130 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHH--HcCCH--HHHcceEEEE--CHHHHHhc-CCCCEEEEecchhHHHHHHHHHHh
Confidence 4455555666666554333222 111 11111 2222335555 88888753 678999999999999986543222
Q ss_pred hhhCCCcceeeechhhhhhhHHHHHHHh----CCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCcc-CCCC
Q psy15309 174 FHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSAYFMRRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTR-SRTG 248 (258)
Q Consensus 174 ~~~~l~~p~iaag~~l~~~p~ig~llr~----~GaffI~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtR-SrtG 248 (258)
..+.++..| ...+ +.|.+..++.. .|+-.|.+. ..+++.++ .+++|. .+++-+.--= ..+|
T Consensus 131 -~~~~~~~~v--yr~~-~n~~~d~~~~~~R~~~g~~~i~~~--------~~~r~~~~-~Lk~g~-~v~~l~Dq~~~~~~g 196 (293)
T PRK06946 131 -SLRRRVGSL--YTPM-SNPLLDAIAKAARGRFGAEMVSRA--------DSARQVLR-WLRDGK-PVMLGADMDFGLRDS 196 (293)
T ss_pred -cccCCceEE--eeCC-CCHHHHHHHHHHHHhcCCCccCCC--------chHHHHHH-HHhCCC-eEEEeCCCCCCCCCC
Confidence 123333223 3344 56888877654 344444321 13555565 467886 7888765431 1345
Q ss_pred CCCC
Q psy15309 249 KSLY 252 (258)
Q Consensus 249 kl~~ 252 (258)
-..|
T Consensus 197 v~v~ 200 (293)
T PRK06946 197 TFVP 200 (293)
T ss_pred eEeC
Confidence 4444
No 48
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.33 E-value=3.9 Score=35.77 Aligned_cols=121 Identities=12% Similarity=0.106 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHHhcccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhh
Q psy15309 114 LTVVRWLGLLLVKILKKTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMF 193 (258)
Q Consensus 114 ~~~~r~~~~~l~~~~~~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p 193 (258)
.+.++++.+++..+++.++...+..-.+.+. ..+...+|+|+..=|-=+ .|+-..+..+..+ +.+.. .-..--
T Consensus 9 ~~v~~~l~~l~~~ylrlv~~T~r~~~~~~~~-~~~~~~~p~I~afWHg~l----~l~p~~~~~~~~~-~amvS-~s~DGE 81 (214)
T COG2121 9 KFVISILTSLLYGYLRLVYLTSRWKAGGADN-NALANEKPGIVAFWHGQL----ALGPFAFPKGKKI-YAMVS-PSRDGE 81 (214)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHhhhhhhc-chhhccCCeEEEEecccc----ccchhhccCCCcE-EEEEc-CCcCHH
Confidence 3455555555555555544322222112211 122357899999988543 2322333334332 22222 223445
Q ss_pred HHHHHHHhCCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccC
Q psy15309 194 LMGNMLRGCSAYFMRRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRS 245 (258)
Q Consensus 194 ~ig~llr~~GaffI~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRS 245 (258)
++..++.+.|.--||-+..+.. ..++.+.+.. |++|. ++.|-|+|-+-
T Consensus 82 liA~~l~kfG~~~IRGSs~Kgg--~~Alr~l~k~-Lk~G~-~i~itpDgPkG 129 (214)
T COG2121 82 LIARLLEKFGLRVIRGSSNKGG--ISALRALLKA-LKQGK-SIAITPDGPKG 129 (214)
T ss_pred HHHHHHHHcCceEEeccCCcch--HHHHHHHHHH-HhCCC-cEEEcCCCCCC
Confidence 7888999999999987764443 3667887765 68997 89999999763
No 49
>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=89.57 E-value=2.6 Score=38.58 Aligned_cols=92 Identities=4% Similarity=0.055 Sum_probs=56.7
Q ss_pred ccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhC----CcEEEEcCCC
Q psy15309 138 NEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGC----SAYFMRRTYG 212 (258)
Q Consensus 138 ~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~----GaffI~R~~~ 212 (258)
+.+|.|.+.++. ++.++|++.-|..++|.+.... ..++.++..+ .... +.|.+..++... |.-.|..+
T Consensus 118 ~~~g~e~l~~a~a~gkgvIllt~H~GnWE~~~~~l--~~~~~~~~~v--yr~~-~n~~~d~~i~~~R~~~g~~~i~~~-- 190 (308)
T PRK06553 118 EVRGIEIFERLRDDGKPALIFTAHLGNWELLAIAA--AAFGLDVTVL--FRPP-NNPYAARKVLEARRTTMGGLVPSG-- 190 (308)
T ss_pred EecCHHHHHHHHhcCCCEEEEeeCchHHHHHHHHH--HHcCCceEEE--EecC-CChHHHHHHHHHHHHcCCCcccCC--
Confidence 344888887654 5789999999999999865432 2345443333 3344 568887776643 33333211
Q ss_pred CcHHHHHHHHHHHHHHHHcCCceEEEEeCCc
Q psy15309 213 TDKLYWRVFDVYVQALVTSCVAPLEFFIEGT 243 (258)
Q Consensus 213 ~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGt 243 (258)
. ..+++.++. +++|. .+++.+--.
T Consensus 191 -~----~~~r~l~r~-Lk~g~-~v~il~DQ~ 214 (308)
T PRK06553 191 -A----GAAFALAGV-LERGG-HVGMLVDQK 214 (308)
T ss_pred -C----hHHHHHHHH-HHcCC-eEEEEeccc
Confidence 1 234555654 67886 798886544
No 50
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=89.53 E-value=7 Score=38.18 Aligned_cols=101 Identities=5% Similarity=-0.020 Sum_probs=59.9
Q ss_pred Eccchhhhhhcc-CCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHh----CCcEEEEcCC
Q psy15309 137 VNEEQLNKLRKQ-WGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSAYFMRRTY 211 (258)
Q Consensus 137 v~~~g~e~L~~~-~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~----~GaffI~R~~ 211 (258)
++.+|+|++.++ .++.++|++.-|..++|....... .+.++ .+....+ +.|++..++.. .|+-.|...
T Consensus 124 ~~~egle~l~~ala~gkGvIllt~H~GNWEl~~~~l~---~~~p~--~~vyRp~-kNp~ld~li~~~R~r~G~~lI~~~- 196 (454)
T PRK05906 124 SSQQELEHTFSRLDEQEGAILFCGHQANWELPFLYIT---KRYPG--LAFAKPI-KNRRLNKKIFSLRESFKGKIVPPK- 196 (454)
T ss_pred ccchhHHHHHHHHHCCCCEEEEeehhhHHHHHHHHHH---cCCCe--EEEEecC-CCHHHHHHHHHHHHhcCCeeecCc-
Confidence 345677776543 357899999999999997543222 23343 3333354 56888777654 444444321
Q ss_pred CCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCCCCC
Q psy15309 212 GTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSRTGKSLYP 253 (258)
Q Consensus 212 ~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtGkl~~p 253 (258)
..+++.++. +++|. .++|-|.-.-.+.|-..||
T Consensus 197 -------~giR~lira-Lk~G~-~vgiL~DQ~~~~~Gv~VpF 229 (454)
T PRK05906 197 -------NGINQALRA-LHQGE-VVGIVGDQALLSSSYSYPL 229 (454)
T ss_pred -------hHHHHHHHH-HhcCC-EEEEEeCCCCCCCceEeCC
Confidence 235566654 67886 7888876543234544443
No 51
>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=89.15 E-value=2.9 Score=37.91 Aligned_cols=93 Identities=9% Similarity=0.141 Sum_probs=57.6
Q ss_pred cEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHh----CCcEEEEc
Q psy15309 134 SVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSAYFMRR 209 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~----~GaffI~R 209 (258)
.+.+ +|.|.+.++ ++.++|++.-|-.++|........ ++.++. +..... +.|.+..++.. .|.-.|..
T Consensus 99 ~v~~--~g~e~l~~~-~gkgvIl~t~H~GnwE~~~~~l~~--~~~~~~--~vyr~~-~n~~~d~~~~~~R~~~g~~~i~~ 170 (290)
T PRK06628 99 RIEI--IGIENIKKL-EGQPFLLFSGHFANWDISLKILHK--FYPKVA--VIYRKA-NNPYVNKLVNESRAGDKLRLIPK 170 (290)
T ss_pred eEEE--eCHHHHHHh-cCCcEEEEEecchHHHHHHHHHHH--hCCCee--EEEecC-CCHHHHHHHHHHHHhcCCceecC
Confidence 3555 499999876 788999999999999976544333 232322 223344 55888776643 45555531
Q ss_pred CCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCc
Q psy15309 210 TYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGT 243 (258)
Q Consensus 210 ~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGt 243 (258)
+ . ..+++.++ .+++|. .+++.+.-.
T Consensus 171 ~--~-----~~~r~l~k-~Lk~g~-~v~il~Dq~ 195 (290)
T PRK06628 171 G--P-----EGSRALVR-AIKESE-SIVMLVDQK 195 (290)
T ss_pred C--C-----chHHHHHH-HHHcCC-eEEEEeccc
Confidence 1 1 12445555 467886 788886654
No 52
>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated
Probab=89.02 E-value=7.5 Score=35.64 Aligned_cols=103 Identities=12% Similarity=0.014 Sum_probs=59.8
Q ss_pred cEEEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHh----CCcEEEE
Q psy15309 134 SVYVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSAYFMR 208 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~----~GaffI~ 208 (258)
.+.+. |.|.+.++. ++.++|+++-|..++|.+... +..++.++..|. ..+ +.|.+..++.. .|.-.|.
T Consensus 114 ~~~~~--g~e~l~~a~~~gkgvI~~t~H~gnwE~~~~~--~~~~~~~~~~vy--r~~-~n~~~d~~~~~~R~~~g~~~i~ 186 (314)
T PRK08943 114 RVEWH--GLEILEEARANGENVIFLVPHGWAIDIPAML--LASQGQPMAAMF--HNQ-RNPLFDWLWNRVRRRFGGRLHA 186 (314)
T ss_pred eEEEE--CHHHHHHHHhCCCCEEEEEechhHHHHHHHH--HHhcCCCccEEE--eCC-CCHHHHHHHHHHHhhcCCeeec
Confidence 35554 888887654 478999999998888865433 323455543333 344 55777776643 4444453
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccC-CCCCCCCC
Q psy15309 209 RTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRS-RTGKSLYP 253 (258)
Q Consensus 209 R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRS-rtGkl~~p 253 (258)
+. ..+++.++ .+++|. .+++-+.-.=+ .+|-..+|
T Consensus 187 ~~--------~~~r~i~k-aLk~g~-~v~il~Dq~~~~~~gv~v~F 222 (314)
T PRK08943 187 RE--------DGIKPFIS-SVRQGY-WGYYLPDEDHGPEHSVFVDF 222 (314)
T ss_pred Cc--------hhHHHHHH-HHhCCC-eEEEeCCCCCCCCCCEEeCC
Confidence 21 22445554 467886 78888654422 34544443
No 53
>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase. This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars.
Probab=88.96 E-value=5.4 Score=36.39 Aligned_cols=92 Identities=12% Similarity=0.099 Sum_probs=55.2
Q ss_pred cEEEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHh----CCcEEEE
Q psy15309 134 SVYVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSAYFMR 208 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~----~GaffI~ 208 (258)
.+.+. |.|.+.++. ++.++|+++-|...+|.....+. ..+.++..| ...+ +.|.+..++.. .|.-.|.
T Consensus 105 ~~~i~--g~e~l~~~~~~gkgvi~~t~H~gnwE~~~~~~~--~~~~~~~~v--~r~~-~n~~~d~~~~~~R~~~g~~~i~ 177 (305)
T TIGR02208 105 RVNLM--GLEHIEAAQAAGKPVIFLVPHGWAIDYAGLRLA--SQGLPMVTM--FNNH-KNPLFDWLWNRVRSRFGGHVYA 177 (305)
T ss_pred ceEEe--CHHHHHHHHhCCCCEEEEecchhHHHHHHHHHH--hcCCCceEE--eeCC-CCHHHHHHHHHHHhcCCCceec
Confidence 35554 888887653 57899999999988996544332 234444333 3344 45888776553 3333342
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCC
Q psy15309 209 RTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEG 242 (258)
Q Consensus 209 R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEG 242 (258)
.. ..+++.++ .+++|. .|++-+--
T Consensus 178 ~~--------~~~r~i~~-aLk~g~-~v~il~Dq 201 (305)
T TIGR02208 178 RE--------AGIKALLA-SLKRGE-SGYYLPDE 201 (305)
T ss_pred Ch--------hhHHHHHH-HHhCCC-eEEEeCCC
Confidence 21 22455565 467886 78877544
No 54
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed
Probab=86.50 E-value=5.7 Score=36.20 Aligned_cols=89 Identities=12% Similarity=0.020 Sum_probs=54.2
Q ss_pred cEEEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHh----CCcEEEE
Q psy15309 134 SVYVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSAYFMR 208 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~----~GaffI~ 208 (258)
.+++. |.|.+.++. ++.++|+++-|-.++|........ + .+. .+....+ +.|++..++.. .|.-.|.
T Consensus 107 ~v~~~--g~e~l~~a~~~gkgvI~lt~H~GnwE~~~~~l~~--~-~~~--~~vyr~~-~n~~~d~~~~~~R~~~g~~~i~ 178 (305)
T PRK08025 107 WFDVE--GLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGL--C-QPM--MATYRPH-NNKLMEWVQTRGRMRSNKAMIG 178 (305)
T ss_pred eEEEE--CHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHc--c-CCC--eEEEeCC-CCHHHHHHHHHHHhccCCcCcC
Confidence 35554 888887653 578999999999999976543322 1 232 3333354 45888877643 3444453
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeC
Q psy15309 209 RTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIE 241 (258)
Q Consensus 209 R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpE 241 (258)
++ . +++.++ .+++|. .++|-+-
T Consensus 179 ~~--------~-~r~~~~-aLk~g~-~v~il~D 200 (305)
T PRK08025 179 RN--------N-LRGIVG-ALKKGE-AVWFAPD 200 (305)
T ss_pred cc--------c-HHHHHH-HHhCCC-eEEEeCC
Confidence 21 1 344454 467886 7888754
No 55
>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=86.22 E-value=9 Score=35.01 Aligned_cols=89 Identities=8% Similarity=-0.048 Sum_probs=54.6
Q ss_pred cchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHh----CCcEEEEcCCCC
Q psy15309 139 EEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSAYFMRRTYGT 213 (258)
Q Consensus 139 ~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~----~GaffI~R~~~~ 213 (258)
.+|.|.+.++. ++.++|++.-|-.++|........ ..++..| ...+ +.|.+..++.. .|.-.|..+ .
T Consensus 99 ~~g~e~l~~~~~~gkgvI~lt~H~GnwE~~~~~~~~---~~~~~~v--yr~~-~n~~~d~~~~~~R~~~g~~~i~~~--~ 170 (305)
T PRK08734 99 RHGQELYDAALASGRGVIVAAPHFGNWELLNQWLSE---RGPIAIV--YRPP-ESEAVDGFLQLVRGGDNVRQVRAE--G 170 (305)
T ss_pred ecCHHHHHHHHHcCCCEEEEccccchHHHHHHHHHc---cCCceEE--EeCC-CCHHHHHHHHHHhccCCCeeecCC--c
Confidence 34888887654 477999999999999986543322 2243222 3344 56888777663 455555211 1
Q ss_pred cHHHHHHHHHHHHHHHHcCCceEEEEeCC
Q psy15309 214 DKLYWRVFDVYVQALVTSCVAPLEFFIEG 242 (258)
Q Consensus 214 ~~ly~~vl~~yi~~ll~~g~~~l~iFpEG 242 (258)
..+++.++ .+++|. .|++-+.-
T Consensus 171 -----~~~r~li~-~Lk~g~-~v~~l~Dq 192 (305)
T PRK08734 171 -----PAVRQLFK-VLKDGG-AVGILPDQ 192 (305)
T ss_pred -----hhHHHHHH-HHhcCC-eEEEeCCC
Confidence 22455565 467886 78887654
No 56
>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase. This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis.
Probab=84.84 E-value=24 Score=31.98 Aligned_cols=89 Identities=8% Similarity=-0.013 Sum_probs=53.8
Q ss_pred cEEEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHH----hCCcEEEE
Q psy15309 134 SVYVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLR----GCSAYFMR 208 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr----~~GaffI~ 208 (258)
.+.+. |.|.+.++. ++.++|++.-|-.++|........ . .+. .+..... +.|.+..++. ..|.-.|.
T Consensus 103 ~v~i~--g~e~l~~a~~~gkgvI~lt~H~GnwE~~~~~~~~--~-~~~--~~vyr~~-~n~~~d~l~~~~R~~~g~~~i~ 174 (303)
T TIGR02207 103 WMQIE--GLEHLQRAQKQGRGVLLVGVHFLTLELGARIFGQ--Q-QPG--IGVYRPH-NNPLFDWIQTRGRLRSNKAMID 174 (303)
T ss_pred cEEEE--CHHHHHHHHhcCCCEEEEecchhHHHHHHHHHHc--c-CCC--eEEEeCC-CCHHHHHHHHHHHHhcCCcccC
Confidence 35554 888887764 578999999999999986543322 1 232 2233343 4577777653 23444443
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeC
Q psy15309 209 RTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIE 241 (258)
Q Consensus 209 R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpE 241 (258)
++ . +++.++ .+++|. .|.|-+.
T Consensus 175 ~~--------~-~r~i~~-~Lk~g~-~v~il~D 196 (303)
T TIGR02207 175 RK--------D-LRGMIK-ALKNGE-RIWYAPD 196 (303)
T ss_pred cc--------c-HHHHHH-HHhCCC-eEEEeCC
Confidence 21 1 344454 567886 7888775
No 57
>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=83.39 E-value=6.9 Score=35.78 Aligned_cols=90 Identities=11% Similarity=-0.031 Sum_probs=54.7
Q ss_pred cEEEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHH----hCCcEEEE
Q psy15309 134 SVYVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLR----GCSAYFMR 208 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr----~~GaffI~ 208 (258)
.+++. |.|.+.++. ++.++|++.-|-.++|.+...... ++ +. .+ ..... +.|++..++. +.|.-.|.
T Consensus 109 ~v~i~--g~e~l~~a~~~gkgvI~lt~H~GnwE~~~~~~~~--~~-~~-~~-vyr~~-~n~~~d~~~~~~R~~~g~~~i~ 180 (309)
T PRK06860 109 WTEVE--GLEHIREVQAQGRGVLLVGVHFLTLELGARIFGM--HN-PG-IG-VYRPN-DNPLYDWLQTWGRLRSNKSMLD 180 (309)
T ss_pred eEEEe--CHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHc--cC-CC-eE-EeeCC-CCHHHHHHHHHHHhhcCCcCcC
Confidence 35554 888887653 578999999999999986543322 22 32 22 33344 4577776654 24555553
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCC
Q psy15309 209 RTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEG 242 (258)
Q Consensus 209 R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEG 242 (258)
++ + +++.++ .+++|. .++|-+--
T Consensus 181 ~~---~------~r~~~k-~Lk~g~-~v~il~Dq 203 (309)
T PRK06860 181 RK---D------LKGMIK-ALKKGE-RIWYAPDH 203 (309)
T ss_pred cc---c------HHHHHH-HHhcCC-eEEEeCCC
Confidence 21 1 334454 467886 78887654
No 58
>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=83.04 E-value=17 Score=33.19 Aligned_cols=89 Identities=9% Similarity=0.015 Sum_probs=53.4
Q ss_pred cEEEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHh----CCcEEEE
Q psy15309 134 SVYVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSAYFMR 208 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~----~GaffI~ 208 (258)
.+.+. |.|.+.++. ++.++|++.-|..++|.+...... + .++. +....+ +.|++..++.. .|.-.|.
T Consensus 109 ~v~v~--g~e~l~~a~~~gkgvI~~t~H~GnWE~~~~~~~~--~-~~~~--~vyr~~-~n~~~d~~i~~~R~~~g~~~i~ 180 (306)
T PRK08733 109 GVQIE--GLEHLQQLQQQGRGVLLVSGHFMTLEMCGRLLCD--H-VPLA--GMYRRH-RNPVFEWAVKRGRLRYATHMFA 180 (306)
T ss_pred cEEEe--CHHHHHHHHhCCCCEEEEecCchHHHHHHHHHHc--c-CCce--EEEeCC-CCHHHHHHHHHHHhhcCCcCcC
Confidence 45554 888887653 578999999999999976533222 2 3332 233344 45777776554 3444442
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeC
Q psy15309 209 RTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIE 241 (258)
Q Consensus 209 R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpE 241 (258)
+ ..+++.++ .+++|. .+.+-+-
T Consensus 181 ~---------~~~r~~~k-aLk~g~-~v~il~D 202 (306)
T PRK08733 181 N---------EDLRATIK-HLKRGG-FLWYAPD 202 (306)
T ss_pred c---------ccHHHHHH-HHhCCC-eEEEeCC
Confidence 1 12445565 467886 7777755
No 59
>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=81.66 E-value=26 Score=31.57 Aligned_cols=90 Identities=13% Similarity=0.178 Sum_probs=52.1
Q ss_pred cEEEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHh----CCc-EEE
Q psy15309 134 SVYVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSA-YFM 207 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~----~Ga-ffI 207 (258)
.++++ |.|.+.++. ++.++|++.-|-.++|........ ..+. .+....+ +.|.+-.++.. .|. ..+
T Consensus 89 ~~~~~--~~e~l~~~~~~gkgvI~~t~H~GnWEl~~~~~~~---~~~~--~~i~r~~-~n~~~d~~~~~~R~~~g~~~i~ 160 (289)
T PRK08706 89 LVRYR--NKHYLDDALAAGEKVIILYPHFTAFEMAVYALNQ---DVPL--ISMYSHQ-KNKILDEQILKGRNRYHNVFLI 160 (289)
T ss_pred ceEEE--CHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHc---cCCC--cEEeeCC-CCHHHHHHHHHHHhccCCcccc
Confidence 35665 888887654 578999999999999975433222 2333 3333344 55777776654 333 222
Q ss_pred EcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEe
Q psy15309 208 RRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFI 240 (258)
Q Consensus 208 ~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFp 240 (258)
.+. ..+++.++.|-++|. .+++.+
T Consensus 161 ~~~--------~~~r~i~k~L~k~~~-~v~~l~ 184 (289)
T PRK08706 161 GRT--------EGLRALVKQFRKSSA-PFLYLP 184 (289)
T ss_pred cCh--------hhHHHHHHHHHhCCc-eEEEeC
Confidence 321 235555654435664 566664
No 60
>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=80.40 E-value=21 Score=32.21 Aligned_cols=87 Identities=11% Similarity=0.023 Sum_probs=51.5
Q ss_pred chhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHh----CCcEEEE-cCCCC
Q psy15309 140 EQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSAYFMR-RTYGT 213 (258)
Q Consensus 140 ~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~----~GaffI~-R~~~~ 213 (258)
+|.|.+.++. ++.++|++.-|-.+++.+...... .+ + +.++. ..+ +.|.+..++.. .|.-.|. +.
T Consensus 99 ~g~e~l~~a~~~gkgvI~lt~H~GnWE~~~~~~~~--~~-~-~~~v~-r~~-~n~~~d~~~~~~R~~~g~~~i~~~~--- 169 (295)
T PRK05645 99 EGLEVLEQALASGKGVVGITSHLGNWEVLNHFYCS--QC-K-PIIFY-RPP-KLKAVDELLRKQRVQLGNRVAPSTK--- 169 (295)
T ss_pred cCHHHHHHHHhcCCCEEEEecchhhHHHHHHHHHh--cC-C-CeEEE-eCC-CCHHHHHHHHHHhCCCCCeEeecCc---
Confidence 4888887653 477999999999999975433222 22 2 23333 243 45777666554 3444442 11
Q ss_pred cHHHHHHHHHHHHHHHHcCCceEEEEeCC
Q psy15309 214 DKLYWRVFDVYVQALVTSCVAPLEFFIEG 242 (258)
Q Consensus 214 ~~ly~~vl~~yi~~ll~~g~~~l~iFpEG 242 (258)
..+.+.++ .+++|. .|.|-+--
T Consensus 170 -----~~~r~l~k-aLk~g~-~v~il~Dq 191 (295)
T PRK05645 170 -----EGILSVIK-EVRKGG-QVGIPADP 191 (295)
T ss_pred -----ccHHHHHH-HHhcCC-eEEEcCCC
Confidence 12445555 467886 78877543
No 61
>PRK04974 glycerol-3-phosphate acyltransferase; Validated
Probab=80.14 E-value=5.7 Score=41.61 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHhcccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcce
Q psy15309 117 VRWLGLLLVKILKKTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPC 182 (258)
Q Consensus 117 ~r~~~~~l~~~~~~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~ 182 (258)
.+++..++.++++.+.....+..+-.+.+. +..+.|+|||--+.|..|.+++...|..+|+|-|.
T Consensus 5 ~~~~~~~l~~~l~~~v~~~~~p~~~~~~l~-l~~~~pi~yvl~~~s~~d~l~l~~~~~~~gLp~p~ 69 (818)
T PRK04974 5 RRLYYKLLNLPLKLLVKSKVIPADPAEELG-LDPSRPIVYVLPYNSLSDLLTLRKQCLKLGLPDPL 69 (818)
T ss_pred HHHHHHHHHHHHHHheecccCCCCcHhhcc-CCCCCCEEEEeCCCchhhHHHHHHHHHHcCCCCCc
Confidence 345556667777777655555432233333 45789999999999999999999999999998875
No 62
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=79.22 E-value=8.3 Score=28.10 Aligned_cols=49 Identities=14% Similarity=0.179 Sum_probs=35.4
Q ss_pred hHHHHHHHhCCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccC
Q psy15309 193 FLMGNMLRGCSAYFMRRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRS 245 (258)
Q Consensus 193 p~ig~llr~~GaffI~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRS 245 (258)
-++..+++..|.-.|+-+....- .++|.+.++. +++|. ++.|-|.|-|=
T Consensus 23 e~ia~~~~~~G~~~iRGSs~rgg--~~Alr~~~~~-lk~G~-~~~itpDGPrG 71 (74)
T PF04028_consen 23 ELIARVLERFGFRTIRGSSSRGG--ARALREMLRA-LKEGY-SIAITPDGPRG 71 (74)
T ss_pred HHHHHHHHHcCCCeEEeCCCCcH--HHHHHHHHHH-HHCCC-eEEEeCCCCCC
Confidence 35677777888777776654432 3678887765 67997 89999999764
No 63
>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=77.22 E-value=13 Score=33.88 Aligned_cols=92 Identities=8% Similarity=-0.046 Sum_probs=53.3
Q ss_pred ccEEEccchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHh----CCcEEE
Q psy15309 133 TSVYVNEEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSAYFM 207 (258)
Q Consensus 133 ~~i~v~~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~----~GaffI 207 (258)
..+.+. |.|.+.++. ++.++|++.-|..++|........ ..++ . +....+ +.|++..++.. .|.-.|
T Consensus 105 ~~~~~~--g~e~l~~a~~~gkgvI~~t~H~GnWE~~~~~~~~---~~~~-~-~vyr~~-~n~~~d~~~~~~R~~~g~~~i 176 (310)
T PRK05646 105 RLAHIE--GLEHLQQAQQEGQGVILMALHFTTLEIGAALLGQ---QHTI-D-GMYREH-KNPVFDFIQRRGRERHNLDST 176 (310)
T ss_pred CeEEEe--CHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHc---cCCC-e-EEeeCC-CCHHHHHHHHHHhhccCCCcc
Confidence 345554 888887664 477999999999999986533222 1232 2 233344 55888777654 332111
Q ss_pred EcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeC
Q psy15309 208 RRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIE 241 (258)
Q Consensus 208 ~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpE 241 (258)
.- ++ ..+++.++. +++|. .+.+-+-
T Consensus 177 ~~--~~-----~~~r~ilk~-Lk~g~-~v~il~D 201 (310)
T PRK05646 177 AI--ER-----EDVRGMLKL-LRAGR-AIWYAPD 201 (310)
T ss_pred cc--cH-----hhHHHHHHH-HhCCC-eEEEeCC
Confidence 10 11 224555654 67886 6777755
No 64
>KOG2898|consensus
Probab=75.35 E-value=0.85 Score=42.98 Aligned_cols=92 Identities=18% Similarity=0.134 Sum_probs=55.7
Q ss_pred eEEecCCCCcchHHHHHHHHhhhCCCcceeeechh-hhhhh-HHHHHHHhCCcEEEEcCCCCcHHHHHHHHHHHHHHHHc
Q psy15309 154 VLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMD-FHSMF-LMGNMLRGCSAYFMRRTYGTDKLYWRVFDVYVQALVTS 231 (258)
Q Consensus 154 vV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~-l~~~p-~ig~llr~~GaffI~R~~~~~~ly~~vl~~yi~~ll~~ 231 (258)
-+.+.||-|-+|.++++.. ..|. +.+.- ...+. ..+.+.+.+..+.-.|....+. ..+-..-.+....+
T Consensus 139 ~i~v~nh~Sp~d~~vls~~-~~~~------~v~q~~~~~v~viq~~~~~~s~~~~f~~~e~~d~--~~~~~~~~e~~~~~ 209 (354)
T KOG2898|consen 139 GICVANHFSPWDVLVLSVD-NCYA------LVGQVHGGLVGVIQLALSRASLHFWFERLEFTDR--QVVAKRLAEHVWNE 209 (354)
T ss_pred CCceecccCceeEEEeccc-cchh------eeeecccceEEEeeehhhhhchhhhhhcchhhhh--HhhhhhhhHHHhcC
Confidence 6788899999998888765 2222 11210 00111 2356677777777777654432 11222334444445
Q ss_pred CCceEEEEeCCccCCCCCCCCCC
Q psy15309 232 CVAPLEFFIEGTRSRTGKSLYPK 254 (258)
Q Consensus 232 g~~~l~iFpEGtRSrtGkl~~pK 254 (258)
+..++.+|||||-..+-....||
T Consensus 210 ~~~~ii~fpegtCinn~~~~~fk 232 (354)
T KOG2898|consen 210 RKEPILLFPEGTCINNTKVMQFK 232 (354)
T ss_pred CCCcEEEeecceeeCCceeEEEe
Confidence 43489999999998887777777
No 65
>KOG4666|consensus
Probab=75.06 E-value=2.3 Score=39.76 Aligned_cols=92 Identities=4% Similarity=-0.295 Sum_probs=58.7
Q ss_pred CeEEecCCCCcchHHH-HHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHHHHHHHHHHHHHHHHc
Q psy15309 153 PVLFLPSHRSYGDFIL-MALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKLYWRVFDVYVQALVTS 231 (258)
Q Consensus 153 pvV~v~nHrS~lD~ll-l~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ly~~vl~~yi~~ll~~ 231 (258)
|+-...-|-|..|..+ .+. ..+.++..++-.++|++|.+.+..-..++.|...++. +.+.......-++.
T Consensus 8 ~~~~s~p~ss~~d~~~~~s~-------s~~s~v~~~~~~~~~~~~r~~~y~~~~l~~~~~~ds~--k~tV~~i~~~~~~~ 78 (412)
T KOG4666|consen 8 LNSNSNPPSSKEDRPLLKSE-------SDLAAAIEELDKKFAPYARTDLYGTMGLGPFPMTENI--KLAVALVTLVPLRF 78 (412)
T ss_pred ccccCCCCccccccchhhhc-------ccHHHHHHhhcccCCchhhhhhhccceeccCCChHHH--HHHHHHHHHhhhcc
Confidence 3333445777777544 333 2345666666668999999999999899998866542 23444444444555
Q ss_pred CC-ceEEEEeCCccCCCCCCCCCCCC
Q psy15309 232 CV-APLEFFIEGTRSRTGKSLYPKLD 256 (258)
Q Consensus 232 g~-~~l~iFpEGtRSrtGkl~~pK~G 256 (258)
|. -+|.+|||||-. -+..||.|
T Consensus 79 ~~~~qIll~~~~~C~---~~~~Fk~~ 101 (412)
T KOG4666|consen 79 LLSMSILLLYYLICR---VFTLFSAP 101 (412)
T ss_pred CCCceeeeeeccceE---EEEEecCC
Confidence 54 358999999965 44455544
No 66
>COG3176 Putative hemolysin [General function prediction only]
Probab=71.69 E-value=18 Score=33.28 Aligned_cols=100 Identities=10% Similarity=0.023 Sum_probs=58.7
Q ss_pred cEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeec-hhhhhhhHHHHHHHhCCcEEEEcCCC
Q psy15309 134 SVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAG-MDFHSMFLMGNMLRGCSAYFMRRTYG 212 (258)
Q Consensus 134 ~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag-~~l~~~p~ig~llr~~GaffI~R~~~ 212 (258)
+.++...+.++++ ..++++.|+||.-..|...+.-++-+.. +.-.+.+- ..+...|++. ..-|.|+.-..
T Consensus 65 ~~~l~~~~~~~~~---d~d~fd~VcnHlgv~Dg~~~~d~~~~~v-gtyR~l~~~~A~r~~~~ys-----~~ef~v~~~~~ 135 (292)
T COG3176 65 DARLDAAALERIP---DQDRFDIVCNHLGVRDGVIVADLLKQLV-GTYRLLANAQALRAGGFYS-----ALEFPVDWLEE 135 (292)
T ss_pred CcccccccccccC---CCCCeeEeccccceecccchhhhHhhhc-CceEEeehHHHHHhCCCcc-----ccccceeeecc
Confidence 4566666666654 5789999999988899888755554322 22233333 2232333332 22445555444
Q ss_pred CcHH-HHHHHHHHHHHHHHcCCceEEEEeCCc
Q psy15309 213 TDKL-YWRVFDVYVQALVTSCVAPLEFFIEGT 243 (258)
Q Consensus 213 ~~~l-y~~vl~~yi~~ll~~g~~~l~iFpEGt 243 (258)
.++. .-..-...+....++|. .|++||-|.
T Consensus 136 ~~~~k~~e~grscv~~~yr~g~-tl~lfwaG~ 166 (292)
T COG3176 136 LRPKKFNELGRSCVHREYREGR-TLLLFWAGL 166 (292)
T ss_pred cChHHHHHHHHHHHHHHHhcCC-EEEEeccch
Confidence 3321 11223444566688996 899999986
No 67
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system.
Probab=63.73 E-value=31 Score=36.18 Aligned_cols=56 Identities=16% Similarity=0.278 Sum_probs=40.0
Q ss_pred HHHHHhcccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcce
Q psy15309 126 KILKKTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPC 182 (258)
Q Consensus 126 ~~~~~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~ 182 (258)
++++.+.....+..+-.+.+. +..+.|+|||--+.|..|.+++...|...|+|-|.
T Consensus 4 ~~l~~~v~~~~ip~~~~~~l~-l~~~~p~~yvl~~~s~~d~~~l~~~~~~~~lp~p~ 59 (799)
T TIGR03703 4 LPLSLLVRSKVIPSDPIQELG-LDPERPIVYVLPTRSLSDLLALQKACRKLGLPDPL 59 (799)
T ss_pred hhhHHHeeCcccCCCchhhcc-CCCCCCEEEEeCCCchhhHHHHHHHHHHcCCcCCC
Confidence 334444444344333333332 45789999999999999999999999999998874
No 68
>KOG4321|consensus
Probab=62.73 E-value=10 Score=32.47 Aligned_cols=95 Identities=12% Similarity=0.129 Sum_probs=58.0
Q ss_pred HHhcccEEEccchhhhhhccCCCCCeEEecCCCCc-chHHHHH-HHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEE
Q psy15309 129 KKTRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSY-GDFILMA-LLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYF 206 (258)
Q Consensus 129 ~~~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~-lD~lll~-~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~Gaff 206 (258)
.++|.|-.|- |+|+++ +++|.++|--|-.. +|-..++ -.+.... .+-+-..+.-||+.|-.|.+-. +|-
T Consensus 26 ariyhgyevi--glenvp---qegpalivyyhgaipidmyylnsrmllqre-rliytigdrflfklpgwgtise---afh 96 (279)
T KOG4321|consen 26 ARIYHGYEVI--GLENVP---QEGPALIVYYHGAIPIDMYYLNSRMLLQRE-RLIYTIGDRFLFKLPGWGTISE---AFH 96 (279)
T ss_pred hhhccceeEe--ecccCC---CcCceEEEEEcCccceeeeeechHHHHhhh-hheEeecceeEEeCCCccchhh---hhc
Confidence 5778887777 999886 78999999999887 7744332 2232222 1222223334567776666543 444
Q ss_pred EEcCCCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCc
Q psy15309 207 MRRTYGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGT 243 (258)
Q Consensus 207 I~R~~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGt 243 (258)
|..+ ..+..+ .++++|. -+.|-|-|.
T Consensus 97 vspg---------tvqscv-silrdgn-llaispggv 122 (279)
T KOG4321|consen 97 VSPG---------TVQSCV-SILRDGN-LLAISPGGV 122 (279)
T ss_pred cCCc---------cHHHHH-HhhccCc-EEEEcCCce
Confidence 4432 234455 4678884 788888764
No 69
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=62.33 E-value=35 Score=25.93 Aligned_cols=61 Identities=15% Similarity=0.127 Sum_probs=37.5
Q ss_pred HHHHHhcCHHHHHHHHHHHhh-------cCCCcchhhhcccccHHHHHHHHHHHHHHhccCCCHH-HHHHHHHHHHHHHH
Q psy15309 58 IKYNVLESEETASIIHEFSLE-------LSLPKEQFSLELSLPKEQIRLQVLDILNEIGYGRSLT-VVRWLGLLLVKILK 129 (258)
Q Consensus 58 ~~~~vl~s~~v~~~i~~~a~~-------~~~~~~~~~~~~~~~~~~~~~~a~~il~em~~~~~~~-~~r~~~~~l~~~~~ 129 (258)
+.+.|.+|..|-.-|+..|.+ .|.+ ..---..|..||+||+.+.+.. ..|...|-+...+.
T Consensus 21 lL~~Ii~DttVPRNIRraA~~a~e~L~~e~e~-----------p~vRaAtaIsiLeeisnDPNmP~h~RT~iw~vis~LE 89 (93)
T COG1698 21 LLDEIIQDTTVPRNIRRAAEEAKEALNNEGES-----------PAVRAATAISILEEISNDPNMPLHARTLIWNVISQLE 89 (93)
T ss_pred HHHHHHccccccHHHHHHHHHHHHHHhCCCCC-----------chhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Confidence 455677776665555554443 1222 2223467889999999888765 55877776554443
No 70
>PF05696 DUF826: Protein of unknown function (DUF826); InterPro: IPR008544 This entry is represented by Bacteriophage 933W, Orf26. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=56.01 E-value=32 Score=25.23 Aligned_cols=42 Identities=24% Similarity=0.166 Sum_probs=31.1
Q ss_pred hHHHHHHHhcCHHHHHHHHHHHhhcCCCcchhhhcccccHHHHHHHHHHHHHHhc
Q psy15309 55 PEVIKYNVLESEETASIIHEFSLELSLPKEQFSLELSLPKEQIRLQVLDILNEIG 109 (258)
Q Consensus 55 ~~~~~~~vl~s~~v~~~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~il~em~ 109 (258)
..++...+|.|+.|..++++.....- ..++..++..+|++|-
T Consensus 9 T~e~VK~aL~Se~V~~alK~qvr~~l-------------e~qiDa~VD~~L~~ll 50 (78)
T PF05696_consen 9 TAEAVKQALRSEEVTSALKQQVRQNL-------------EAQIDAEVDAALDELL 50 (78)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHh
Confidence 45677889999999999987554421 3456777888888874
No 71
>PF10940 DUF2618: Protein of unknown function (DUF2618); InterPro: IPR021237 This bacterial family of proteins has no known function. The sequences within the family are highly conserved.
Probab=53.37 E-value=5.1 Score=25.31 Aligned_cols=19 Identities=37% Similarity=0.614 Sum_probs=15.4
Q ss_pred CCeEEecCCCCcchHHHHH
Q psy15309 152 NPVLFLPSHRSYGDFILMA 170 (258)
Q Consensus 152 ~pvV~v~nHrS~lD~lll~ 170 (258)
..-|..|.|||++|+-++.
T Consensus 12 trHiMmpshR~~Fd~~~f~ 30 (40)
T PF10940_consen 12 TRHIMMPSHRSCFDFSFFN 30 (40)
T ss_pred hhhhhchhhhcccchhhhh
Confidence 3558899999999987764
No 72
>PRK15174 Vi polysaccharide export protein VexE; Provisional
Probab=42.41 E-value=1.3e+02 Score=30.47 Aligned_cols=84 Identities=14% Similarity=0.119 Sum_probs=46.7
Q ss_pred hhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHHHHHHHHH
Q psy15309 145 LRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKLYWRVFDV 223 (258)
Q Consensus 145 L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ly~~vl~~ 223 (258)
+.++. ++.|+|++.-|-++|+........ ++.++..|....+ .+-.+.|+-.|..+..... ..+.+
T Consensus 471 l~~a~~~~kgvi~~t~H~gnwE~~~~~~~~--~~~~~~~i~r~~~--------~~R~~~g~~~i~~~~~~~~---~~~r~ 537 (656)
T PRK15174 471 FQRLQLDQRGCIIVSAHLGAMYAGPMILSL--LEMNSKWVASTPG--------VLKGGYGERLISVSDKSEA---DVVRA 537 (656)
T ss_pred HHHHHhcCCCEEEEecCcchhhHHHHHHHH--cCCCceeeecchH--------HHHHhcCCceeccCCCCcc---hHHHH
Confidence 55543 578999999999999976554333 3444443332211 1224455555643211110 22445
Q ss_pred HHHHHHHcCCceEEEEeCCc
Q psy15309 224 YVQALVTSCVAPLEFFIEGT 243 (258)
Q Consensus 224 yi~~ll~~g~~~l~iFpEGt 243 (258)
.++ .+++|. .|+|-+-..
T Consensus 538 i~~-aLk~g~-~v~il~Dq~ 555 (656)
T PRK15174 538 CMQ-TLHSGQ-SLVVAIDGA 555 (656)
T ss_pred HHH-HHHcCC-eEEEEeCCC
Confidence 454 467886 788886554
No 73
>PF03685 UPF0147: Uncharacterised protein family (UPF0147); InterPro: IPR005354 The proteins in this entry are functionally uncharacterised.; PDB: 2QZG_C 2QSB_A.
Probab=42.11 E-value=1.3e+02 Score=22.58 Aligned_cols=61 Identities=16% Similarity=0.132 Sum_probs=32.5
Q ss_pred HHHHHHhcCHHHHHHHHHHHhh----cCCCcchhhhcccccHHHHHHHHHHHHHHhccCCCHH-HHHHHHHHHH
Q psy15309 57 VIKYNVLESEETASIIHEFSLE----LSLPKEQFSLELSLPKEQIRLQVLDILNEIGYGRSLT-VVRWLGLLLV 125 (258)
Q Consensus 57 ~~~~~vl~s~~v~~~i~~~a~~----~~~~~~~~~~~~~~~~~~~~~~a~~il~em~~~~~~~-~~r~~~~~l~ 125 (258)
.+.++|.+|..|-.-|+..|.+ .... . .....--..|..+|+||+.+++.. ..|...|-+.
T Consensus 13 ~~L~~I~~D~sVPRNIRr~a~ea~~~L~~e--~------~~~~vRaataIs~LdeIsnDPNmP~h~RT~IW~i~ 78 (85)
T PF03685_consen 13 QMLERIINDTSVPRNIRRAAEEAKEILNNE--E------ESPGVRAATAISILDEISNDPNMPSHTRTLIWNIV 78 (85)
T ss_dssp HHHHHHHT-TTS-HHHHHHHHHHHHHCT-T--T------S-HHHHHHHHHHHHHHHCT-TTS-HHHHHHHHHHH
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHhCC--C------cchhHhHHHHHHHHHHhhcCCCCchHHHHHHHHHH
Confidence 3556777776655555444433 2211 0 012233567889999999888765 4577766543
No 74
>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated
Probab=41.52 E-value=2.6e+02 Score=25.07 Aligned_cols=88 Identities=7% Similarity=0.044 Sum_probs=51.4
Q ss_pred cchhhhhhccC-CCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHh----CCcEEEEcCCCC
Q psy15309 139 EEQLNKLRKQW-GDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRG----CSAYFMRRTYGT 213 (258)
Q Consensus 139 ~~g~e~L~~~~-~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~----~GaffI~R~~~~ 213 (258)
.+|.|.+.++. ++.++|++.-|-.++|......... .++..|+ ..+ +.|.+..++.. .|.-.|.-+ .
T Consensus 87 ~~g~e~l~~a~~~gkgvIllt~H~GnwE~~~~~~~~~---~~~~~v~--r~~-~n~~~~~~~~~~R~~~g~~~i~~~--~ 158 (289)
T PRK08905 87 DHGWEHVEAALAEGRGILFLTPHLGCFEVTARYIAQR---FPLTAMF--RPP-RKAALRPLMEAGRARGNMRTAPAT--P 158 (289)
T ss_pred ecCHHHHHHHHhcCCCEEEEecccchHHHHHHHHHhc---CCceEEE--ECC-CCHHHHHHHHHHhcccCCceeccC--C
Confidence 34888876654 4789999999999999865433321 3443333 243 45777766543 343233211 1
Q ss_pred cHHHHHHHHHHHHHHHHcCCceEEEEeC
Q psy15309 214 DKLYWRVFDVYVQALVTSCVAPLEFFIE 241 (258)
Q Consensus 214 ~~ly~~vl~~yi~~ll~~g~~~l~iFpE 241 (258)
..+.+.++ .+++|. .+++-+-
T Consensus 159 -----~~~~~i~~-aLk~g~-~v~il~D 179 (289)
T PRK08905 159 -----QGVRMLVK-ALRRGE-AVGILPD 179 (289)
T ss_pred -----ccHHHHHH-HHhcCC-eEEEcCC
Confidence 12445555 467886 7877754
No 75
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=41.27 E-value=94 Score=27.96 Aligned_cols=96 Identities=8% Similarity=0.000 Sum_probs=59.2
Q ss_pred chhhhhhccCCC--CCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHHH
Q psy15309 140 EQLNKLRKQWGD--NPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKLY 217 (258)
Q Consensus 140 ~g~e~L~~~~~~--~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ly 217 (258)
+|++.|.+..+. -|++-=+-+.+.+|.+.= ..++-.|.+. +.-+.+++..+-+...-+.|.|+.....
T Consensus 66 ~gl~~L~~~~~~~Gl~~~Tev~d~~~v~~~~e-------~vdilqIgs~-~~~n~~LL~~va~tgkPVilk~G~~~t~-- 135 (250)
T PRK13397 66 QGIRYLHEVCQEFGLLSVSEIMSERQLEEAYD-------YLDVIQVGAR-NMQNFEFLKTLSHIDKPILFKRGLMATI-- 135 (250)
T ss_pred HHHHHHHHHHHHcCCCEEEeeCCHHHHHHHHh-------cCCEEEECcc-cccCHHHHHHHHccCCeEEEeCCCCCCH--
Confidence 377777665443 355444444444554321 2344455565 6678899999999999999999944432
Q ss_pred HHHHHHHHHHHHHcCCceEEEEeC-CccCCC
Q psy15309 218 WRVFDVYVQALVTSCVAPLEFFIE-GTRSRT 247 (258)
Q Consensus 218 ~~vl~~yi~~ll~~g~~~l~iFpE-GtRSrt 247 (258)
.-+...++.+...|. .=.+.-| |+++-.
T Consensus 136 -~e~~~A~e~i~~~Gn-~~i~L~eRg~~~Y~ 164 (250)
T PRK13397 136 -EEYLGALSYLQDTGK-SNIILCERGVRGYD 164 (250)
T ss_pred -HHHHHHHHHHHHcCC-CeEEEEccccCCCC
Confidence 224445666777784 4455556 997654
No 76
>PF07319 DnaI_N: Primosomal protein DnaI N-terminus; InterPro: IPR009928 This entry represents the N terminus (approximately 120 residues) of bacterial primosomal DnaI proteins, although one family member appears to be of viral origin. DnaI is one of the components of the Bacillus subtilis replication restart primosome, and is required for the DnaB75-dependent loading of the DnaC helicase [].; PDB: 2K7R_A.
Probab=38.54 E-value=54 Score=24.69 Aligned_cols=24 Identities=29% Similarity=0.366 Sum_probs=18.8
Q ss_pred hHHHHHHHhcCHHHHHHHHHHHhh
Q psy15309 55 PEVIKYNVLESEETASIIHEFSLE 78 (258)
Q Consensus 55 ~~~~~~~vl~s~~v~~~i~~~a~~ 78 (258)
.+.++++||+||.|++-|++..++
T Consensus 21 ~~~l~~~vl~dp~V~~Fl~~h~~e 44 (94)
T PF07319_consen 21 YEQLKQEVLSDPEVQAFLQEHQPE 44 (94)
T ss_dssp HHHHHHHHTT-HHHHHHHHHSTTT
T ss_pred HHHHHHHHHcCHHHHHHHHHhHHh
Confidence 457899999999999999875444
No 77
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=38.50 E-value=9.1 Score=31.77 Aligned_cols=48 Identities=15% Similarity=0.139 Sum_probs=36.4
Q ss_pred cCCCCCCcHHHHHHhccccccccccCCCCChHHHHHHHhcCHHHHHHHHH
Q psy15309 25 EPRRHGSDLAWVFRSMELTKAYDQLRSLSHPEVIKYNVLESEETASIIHE 74 (258)
Q Consensus 25 ~~~~~~~d~~~~~r~~~~~~~~~~~~~~~~~~~~~~~vl~s~~v~~~i~~ 74 (258)
.++.|++|++=.-=+.|+...|-..++ . +.++++++|+||+|-+.+++
T Consensus 83 ~P~YrfEDIdvLDLRVCYNGEWy~tr~-v-s~~ai~~iL~~p~V~~~~K~ 130 (155)
T PF10777_consen 83 KPRYRFEDIDVLDLRVCYNGEWYNTRF-V-SDQAIDKILQSPQVPDEIKQ 130 (155)
T ss_pred cceeeecccCeeEEeEEEcceeeeecc-C-CHHHHHHHHcCCCCCHHHHH
Confidence 677777999877777777766666665 3 44678999999998877664
No 78
>PF12651 RHH_3: Ribbon-helix-helix domain
Probab=38.10 E-value=99 Score=19.94 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=22.5
Q ss_pred CHHHHHHHHHHHhhcCCCcchhhhcccccHHHHHHHHHHHH
Q psy15309 65 SEETASIIHEFSLELSLPKEQFSLELSLPKEQIRLQVLDIL 105 (258)
Q Consensus 65 s~~v~~~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~il 105 (258)
++.+-..++++|.+.|.+ ..++.++|.+.+
T Consensus 10 ~~el~~~L~~ls~~t~i~-----------~S~Ll~eAle~~ 39 (44)
T PF12651_consen 10 DKELYEKLKELSEETGIP-----------KSKLLREALEDY 39 (44)
T ss_pred CHHHHHHHHHHHHHHCCC-----------HHHHHHHHHHHH
Confidence 455667788899999988 777777776644
No 79
>PRK04330 hypothetical protein; Provisional
Probab=34.28 E-value=1.4e+02 Score=22.54 Aligned_cols=67 Identities=13% Similarity=0.042 Sum_probs=35.9
Q ss_pred HHHHHHhcCHHHHHHHHHHHhhcCCCcchhhhcccccHHHHHHHHHHHHHHhccCCCHH-HHHHHHHHHHHH
Q psy15309 57 VIKYNVLESEETASIIHEFSLELSLPKEQFSLELSLPKEQIRLQVLDILNEIGYGRSLT-VVRWLGLLLVKI 127 (258)
Q Consensus 57 ~~~~~vl~s~~v~~~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~il~em~~~~~~~-~~r~~~~~l~~~ 127 (258)
.+.++|.+|.-|-.-|+..|.+.-...- ........--..|-.+|+||+.+++.. ..|...|-+...
T Consensus 16 ~~L~~I~~D~sVPRNIRraa~ea~~~L~----~e~~~~~vRaA~AIs~LdeIs~DPNmP~h~RT~IW~ivS~ 83 (88)
T PRK04330 16 QMLEEIINDTSVPRNIRRAATEAKEILL----NEEESPGVRAATAISILDEISNDPNMPLHTRTLIWNIVSQ 83 (88)
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHh----CcCcchhHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Confidence 3556667776655555544433100000 000002223466888999999888865 558777755433
No 80
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=30.65 E-value=1.9e+02 Score=27.40 Aligned_cols=98 Identities=10% Similarity=0.073 Sum_probs=64.1
Q ss_pred cchhhhhhccCC--CCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHH
Q psy15309 139 EEQLNKLRKQWG--DNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKL 216 (258)
Q Consensus 139 ~~g~e~L~~~~~--~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~l 216 (258)
++|++.|.++.. +-|++-=+-..+.+|.+. .+ .++-.|.+. +..+++++..+-+...-+.+.|+.....
T Consensus 151 ~~gl~~L~~~~~e~Gl~~~tev~d~~~v~~~~-~~------~d~lqIga~-~~~n~~LL~~va~t~kPVllk~G~~~t~- 221 (352)
T PRK13396 151 ESALELLAAAREATGLGIITEVMDAADLEKIA-EV------ADVIQVGAR-NMQNFSLLKKVGAQDKPVLLKRGMAATI- 221 (352)
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHHHHHHH-hh------CCeEEECcc-cccCHHHHHHHHccCCeEEEeCCCCCCH-
Confidence 557877776544 335554444444455432 22 244455565 7778999999999999999999977432
Q ss_pred HHHHHHHHHHHHHHcCCceEEEEeCCccCCC
Q psy15309 217 YWRVFDVYVQALVTSCVAPLEFFIEGTRSRT 247 (258)
Q Consensus 217 y~~vl~~yi~~ll~~g~~~l~iFpEGtRSrt 247 (258)
.-+...++.+...|...|.+.-.|+||-+
T Consensus 222 --ee~~~A~e~i~~~Gn~~viL~erG~rtf~ 250 (352)
T PRK13396 222 --DEWLMAAEYILAAGNPNVILCERGIRTFD 250 (352)
T ss_pred --HHHHHHHHHHHHcCCCeEEEEecCCccCc
Confidence 22334466667777545888888998874
No 81
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=28.94 E-value=2.9e+02 Score=24.89 Aligned_cols=99 Identities=11% Similarity=0.134 Sum_probs=58.0
Q ss_pred cchhhhhhccCC--CCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHH
Q psy15309 139 EEQLNKLRKQWG--DNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKL 216 (258)
Q Consensus 139 ~~g~e~L~~~~~--~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~l 216 (258)
++|++.|++... +-|++-=+-+-+.+|++. .+ .+.-.|.+. +.-+.|++..+-+...-+.+.++...+.
T Consensus 77 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~------~~-vd~~kIga~-~~~n~~LL~~~a~~gkPV~lk~G~~~s~- 147 (266)
T PRK13398 77 EEGLKILKEVGDKYNLPVVTEVMDTRDVEEVA------DY-ADMLQIGSR-NMQNFELLKEVGKTKKPILLKRGMSATL- 147 (266)
T ss_pred HHHHHHHHHHHHHcCCCEEEeeCChhhHHHHH------Hh-CCEEEECcc-cccCHHHHHHHhcCCCcEEEeCCCCCCH-
Confidence 345555555443 345554444444455432 11 233344454 6667789999988888889999865432
Q ss_pred HHHHHHHHHHHHHHcCCceEEEEeCCccCCCC
Q psy15309 217 YWRVFDVYVQALVTSCVAPLEFFIEGTRSRTG 248 (258)
Q Consensus 217 y~~vl~~yi~~ll~~g~~~l~iFpEGtRSrtG 248 (258)
..+...++.+...|...+.+--.|+|+-++
T Consensus 148 --~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~~ 177 (266)
T PRK13398 148 --EEWLYAAEYIMSEGNENVVLCERGIRTFET 177 (266)
T ss_pred --HHHHHHHHHHHhcCCCeEEEEECCCCCCCC
Confidence 123333556666775357777778887654
No 82
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=27.22 E-value=3.2e+02 Score=25.59 Aligned_cols=98 Identities=12% Similarity=0.172 Sum_probs=59.2
Q ss_pred cchhhhhhccCC--CCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHH
Q psy15309 139 EEQLNKLRKQWG--DNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKL 216 (258)
Q Consensus 139 ~~g~e~L~~~~~--~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~l 216 (258)
++|++.|.++.. +-|++-=+-+...+|.+ . .+ .++-.|.+. ++-+.+++..+-+...-+.+.|+...+.
T Consensus 143 ~~gL~~L~~~~~~~Gl~v~tev~d~~~~~~l-----~-~~-vd~lqIgAr-~~~N~~LL~~va~~~kPViLk~G~~~ti- 213 (335)
T PRK08673 143 EEGLKLLAEAREETGLPIVTEVMDPRDVELV-----A-EY-VDILQIGAR-NMQNFDLLKEVGKTNKPVLLKRGMSATI- 213 (335)
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHHHHHH-----H-Hh-CCeEEECcc-cccCHHHHHHHHcCCCcEEEeCCCCCCH-
Confidence 457777765443 34555544444444443 2 22 234455555 7778899999999999999999976431
Q ss_pred HHHHHHHHHHHHHHcCCceEEEEeCCccCCC
Q psy15309 217 YWRVFDVYVQALVTSCVAPLEFFIEGTRSRT 247 (258)
Q Consensus 217 y~~vl~~yi~~ll~~g~~~l~iFpEGtRSrt 247 (258)
.. +...++.+...|...+.+--.|+|+-.
T Consensus 214 -~E-~l~A~e~i~~~GN~~viL~erG~~tf~ 242 (335)
T PRK08673 214 -EE-WLMAAEYILAEGNPNVILCERGIRTFE 242 (335)
T ss_pred -HH-HHHHHHHHHHcCCCeEEEEECCCCCCC
Confidence 22 333455666777523555555888873
No 83
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=27.13 E-value=1.6e+02 Score=27.55 Aligned_cols=90 Identities=14% Similarity=0.136 Sum_probs=63.2
Q ss_pred EEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCc
Q psy15309 135 VYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTD 214 (258)
Q Consensus 135 i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~ 214 (258)
..+..++.+.|.+..++..+.|++ |-+|.--+-++ -.+|.+.--|+.+ ++-++|++..+.+...-+.+.++...-
T Consensus 71 ~~l~~e~~~~L~~~~~~~Gi~~~s---tpfd~~svd~l-~~~~v~~~KIaS~-~~~n~pLL~~~A~~gkPvilStGmatl 145 (329)
T TIGR03569 71 LELSEEDHRELKEYCESKGIEFLS---TPFDLESADFL-EDLGVPRFKIPSG-EITNAPLLKKIARFGKPVILSTGMATL 145 (329)
T ss_pred hCCCHHHHHHHHHHHHHhCCcEEE---EeCCHHHHHHH-HhcCCCEEEECcc-cccCHHHHHHHHhcCCcEEEECCCCCH
Confidence 455666888887776677777776 45665555443 3456666666766 777899999999999999999987532
Q ss_pred HHHHHHHHHHHHHHHHcCC
Q psy15309 215 KLYWRVFDVYVQALVTSCV 233 (258)
Q Consensus 215 ~ly~~vl~~yi~~ll~~g~ 233 (258)
.-+...++.+...|.
T Consensus 146 ----~Ei~~Av~~i~~~G~ 160 (329)
T TIGR03569 146 ----EEIEAAVGVLRDAGT 160 (329)
T ss_pred ----HHHHHHHHHHHHcCC
Confidence 335555666666674
No 84
>PRK11235 bifunctional antitoxin/transcriptional repressor RelB; Provisional
Probab=24.19 E-value=1.3e+02 Score=22.24 Aligned_cols=28 Identities=14% Similarity=0.304 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHhccCCCHHHHHHHHH
Q psy15309 95 EQIRLQVLDILNEIGYGRSLTVVRWLGL 122 (258)
Q Consensus 95 ~~~~~~a~~il~em~~~~~~~~~r~~~~ 122 (258)
++++++|.+++++|+-+.+..+--++..
T Consensus 10 ~~lK~~A~~vl~~lGls~S~Ai~~fl~q 37 (80)
T PRK11235 10 DELKARAYAVLEKLGVTPSEALRLLLQY 37 (80)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 5688999999999988887755544443
No 85
>PF12399 BCA_ABC_TP_C: Branched-chain amino acid ATP-binding cassette transporter
Probab=24.13 E-value=62 Score=18.17 Aligned_cols=12 Identities=8% Similarity=0.055 Sum_probs=10.1
Q ss_pred HHHhcCHHHHHH
Q psy15309 60 YNVLESEETASI 71 (258)
Q Consensus 60 ~~vl~s~~v~~~ 71 (258)
+.|.+||+|+++
T Consensus 9 ~~i~~n~~V~~a 20 (23)
T PF12399_consen 9 EEIRANPEVREA 20 (23)
T ss_pred HHHhcCHHHHHh
Confidence 677999999886
No 86
>PF04221 RelB: RelB antitoxin; InterPro: IPR007337 Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. Several toxin/antitoxin pairs may occur in a single species. RelE and RelB form a toxin-antitoxin system; RelE represses translation, probably through binding ribosomes [, ]. RelB stably binds RelE, presumably deactivating it.; PDB: 2KC8_B 2K29_A.
Probab=24.13 E-value=1.1e+02 Score=22.41 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHhccCCCHHHHHHHHHH
Q psy15309 94 KEQIRLQVLDILNEIGYGRSLTVVRWLGLL 123 (258)
Q Consensus 94 ~~~~~~~a~~il~em~~~~~~~~~r~~~~~ 123 (258)
-++++++|..+|++|+-+.+..+--++..+
T Consensus 9 d~~lK~~a~~il~~~Glt~s~ai~~fl~qi 38 (83)
T PF04221_consen 9 DEELKEEAEAILEELGLTLSDAINMFLKQI 38 (83)
T ss_dssp -HHHHHHHHHHHHHTT--HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 356899999999999888777555544433
No 87
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=24.01 E-value=3.7e+02 Score=24.08 Aligned_cols=97 Identities=15% Similarity=0.176 Sum_probs=59.7
Q ss_pred cchhhhhhccCC--CCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHH
Q psy15309 139 EEQLNKLRKQWG--DNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKL 216 (258)
Q Consensus 139 ~~g~e~L~~~~~--~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~l 216 (258)
.+|++.|++... +-|++--+-+...+|.+. .+ .++-.|.++ ++.+.+++..+-+...-+.|.++...+.
T Consensus 75 ~~gl~~l~~~~~~~Gl~~~t~~~d~~~~~~l~-~~------~d~lkI~s~-~~~n~~LL~~~a~~gkPVilk~G~~~t~- 145 (260)
T TIGR01361 75 EEGLKLLRRAADEHGLPVVTEVMDPRDVEIVA-EY------ADILQIGAR-NMQNFELLKEVGKQGKPVLLKRGMGNTI- 145 (260)
T ss_pred HHHHHHHHHHHHHhCCCEEEeeCChhhHHHHH-hh------CCEEEECcc-cccCHHHHHHHhcCCCcEEEeCCCCCCH-
Confidence 446666665443 345555555555566543 22 233445555 6668899999988888899999866331
Q ss_pred HHHHHHHHHHHHHHcCCceEEEEeCCccCC
Q psy15309 217 YWRVFDVYVQALVTSCVAPLEFFIEGTRSR 246 (258)
Q Consensus 217 y~~vl~~yi~~ll~~g~~~l~iFpEGtRSr 246 (258)
.-+...++.+...|...+.+---|+++-
T Consensus 146 --~e~~~Ave~i~~~Gn~~i~l~~rG~s~y 173 (260)
T TIGR01361 146 --EEWLYAAEYILSSGNGNVILCERGIRTF 173 (260)
T ss_pred --HHHHHHHHHHHHcCCCcEEEEECCCCCC
Confidence 2345557777777753466655588875
No 88
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=22.54 E-value=3e+02 Score=25.98 Aligned_cols=95 Identities=15% Similarity=0.166 Sum_probs=58.1
Q ss_pred chhhhhhccCCC--CCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHHH
Q psy15309 140 EQLNKLRKQWGD--NPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKLY 217 (258)
Q Consensus 140 ~g~e~L~~~~~~--~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ly 217 (258)
+|++.|.+.... -|++-=+-+...+|.+. .+ .++-.|.++ ++.+.|++..+-+....+.+.|+.....
T Consensus 169 e~l~~L~~~~~~~Gl~~~t~v~d~~~~~~l~------~~-vd~lkI~s~-~~~n~~LL~~~a~~gkPVilk~G~~~t~-- 238 (360)
T PRK12595 169 EGLKILKQVADEYGLAVISEIVNPADVEVAL------DY-VDVIQIGAR-NMQNFELLKAAGRVNKPVLLKRGLSATI-- 238 (360)
T ss_pred HHHHHHHHHHHHcCCCEEEeeCCHHHHHHHH------Hh-CCeEEECcc-cccCHHHHHHHHccCCcEEEeCCCCCCH--
Confidence 366666655443 34544444444455432 11 234455555 7778899999999999999999864331
Q ss_pred HHHHHHHHHHHHHcCCceEEEEeC-CccCC
Q psy15309 218 WRVFDVYVQALVTSCVAPLEFFIE-GTRSR 246 (258)
Q Consensus 218 ~~vl~~yi~~ll~~g~~~l~iFpE-GtRSr 246 (258)
.-+...++.+...|. .=.+.-| |+++-
T Consensus 239 -~e~~~Ave~i~~~Gn-~~i~L~erg~s~y 266 (360)
T PRK12595 239 -EEFIYAAEYIMSQGN-GQIILCERGIRTY 266 (360)
T ss_pred -HHHHHHHHHHHHCCC-CCEEEECCccCCC
Confidence 224445666777775 4345565 99874
No 89
>TIGR02384 RelB_DinJ addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than Pfam model pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species.
Probab=20.46 E-value=1.8e+02 Score=21.43 Aligned_cols=28 Identities=18% Similarity=0.394 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHhccCCCHHHHHHHHH
Q psy15309 95 EQIRLQVLDILNEIGYGRSLTVVRWLGL 122 (258)
Q Consensus 95 ~~~~~~a~~il~em~~~~~~~~~r~~~~ 122 (258)
++++++|.+++++++-+++..+--++..
T Consensus 11 ~~lK~~a~~i~~~lGl~~s~ai~~fl~q 38 (83)
T TIGR02384 11 EELKKEAYAVFEELGLTPSTAIRMFLKQ 38 (83)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 5688999999999987777655544443
Done!