Query psy15309
Match_columns 258
No_of_seqs 280 out of 1441
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 17:43:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15309.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15309hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iuq_A Glycerol-3-phosphate ac 99.6 2.4E-16 8.1E-21 145.2 4.5 132 117-256 95-252 (367)
2 1vli_A Spore coat polysacchari 63.3 15 0.00051 33.8 6.7 106 131-246 92-197 (385)
3 2wqp_A Polysialic acid capsule 59.1 13 0.00045 33.7 5.5 98 138-246 89-186 (349)
4 3g8r_A Probable spore coat pol 42.1 26 0.0009 31.7 4.6 99 136-245 74-172 (350)
5 2bsq_E FITA, trafficking prote 34.4 60 0.0021 22.7 4.6 50 65-131 9-58 (77)
6 2qsb_A UPF0147 protein TA0600; 33.7 1.1E+02 0.0037 22.2 5.8 31 97-127 53-84 (89)
7 2qzg_A Conserved uncharacteriz 31.9 1E+02 0.0035 22.5 5.5 31 97-127 57-88 (94)
8 2k7r_A Primosomal protein DNAI 28.9 39 0.0013 24.8 3.0 20 56-75 22-41 (106)
9 1baz_A ARC repressor; transcri 26.8 1.1E+02 0.0038 19.5 4.6 18 65-82 15-32 (53)
10 3h87_C Putative uncharacterize 23.5 1.2E+02 0.0042 21.0 4.5 34 65-112 10-43 (73)
11 1vr6_A Phospho-2-dehydro-3-deo 23.3 1.9E+02 0.0065 26.0 7.0 100 139-247 156-255 (350)
12 4fxe_A Antitoxin RELB; toxin/a 22.1 94 0.0032 21.7 3.8 26 95-120 10-35 (79)
No 1
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=99.61 E-value=2.4e-16 Score=145.19 Aligned_cols=132 Identities=14% Similarity=0.107 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhcccEEEccchhhhhhc----cCCCCCeEEecCCCCcchHHHHHHHHhhhC----CCcceeeechh
Q psy15309 117 VRWLGLLLVKILKKTRTSVYVNEEQLNKLRK----QWGDNPVLFLPSHRSYGDFILMALLCFHYN----IEIPCVAAGMD 188 (258)
Q Consensus 117 ~r~~~~~l~~~~~~~~~~i~v~~~g~e~L~~----~~~~~pvV~v~nHrS~lD~lll~~~l~~~~----l~~p~iaag~~ 188 (258)
+.+...++..++.. .+++|. |++++.+ ++++++|||++||+|++|.+++.+++...+ -+ ..++||++
T Consensus 95 y~~~~~~ir~li~~--~~s~V~--G~e~~~~~~E~l~~~~~vIfisNHQS~~D~~vi~~~l~~~~~~l~~~-~~fVAk~e 169 (367)
T 1iuq_A 95 YIFGQNYIRPLIDF--GNSFVG--NLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAEN-TIFVAGDR 169 (367)
T ss_dssp HHHHHHHHGGGBCG--GGCEEE--CHHHHHHHHHHHHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHH-CEEEECTH
T ss_pred HHHHHHHHHHHHhh--cCCEee--cchhhhhHHhhccCCCcEEEEECCccchhHHHHHHHHhhcccccccc-eEEEeehh
Confidence 33444444433332 356665 7444332 236899999999999999999988884200 02 34567778
Q ss_pred hhhhhHH---HHHHHhCCcEEEEcCCCCc--------HHHHHHHHHHHHHHHHc-CCceEEEEeCCccCCC----CC--C
Q psy15309 189 FHSMFLM---GNMLRGCSAYFMRRTYGTD--------KLYWRVFDVYVQALVTS-CVAPLEFFIEGTRSRT----GK--S 250 (258)
Q Consensus 189 l~~~p~i---g~llr~~GaffI~R~~~~~--------~ly~~vl~~yi~~ll~~-g~~~l~iFpEGtRSrt----Gk--l 250 (258)
+...|+. +.. +..+|+|+.|..... .-..+++++.++ ++++ |. ++||||||||||+ |+ .
T Consensus 170 L~~~Pl~~Pfs~g-~~l~cI~~kk~id~~p~l~r~~~r~n~ksl~~~~~-~Lk~GG~-sI~IFPEGTRsR~~~~~g~l~~ 246 (367)
T 1iuq_A 170 VLADPLCKPFSIG-RNLICVYSKKHMFDIPELTETKRKANTRSLKEMAL-LLRGGSQ-LIWIAPSGGRDRPDPSTGEWYP 246 (367)
T ss_dssp HHHCTTTHHHHHT-SEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHH-HHHHCCC-EEEECTTCSCCCBCTTTCCBCC
T ss_pred hhcCccccchhhh-hheeeEEecccCCCcchhhhhhhHHHHHHHHHHHH-HHHcCCe-EEEEeCCCCCCCCCCCCCcccc
Confidence 8855555 444 556788874443310 112366777675 4566 64 8999999999995 66 4
Q ss_pred CCCCCC
Q psy15309 251 LYPKLD 256 (258)
Q Consensus 251 ~~pK~G 256 (258)
.+||.|
T Consensus 247 ~~Fk~g 252 (367)
T 1iuq_A 247 APFDAS 252 (367)
T ss_dssp CCCCHH
T ss_pred ccccch
Confidence 458765
No 2
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=63.30 E-value=15 Score=33.82 Aligned_cols=106 Identities=11% Similarity=-0.001 Sum_probs=74.5
Q ss_pred hcccEEEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcC
Q psy15309 131 TRTSVYVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRT 210 (258)
Q Consensus 131 ~~~~i~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~ 210 (258)
+|.+.....++.+.|.+..+...+.|++ |-+|.--+-++. .++.++--|+++ |+-++|++..+.+...-+.+.|+
T Consensus 92 ~~~~~~l~~e~~~~L~~~~~~~Gi~~~s---tpfD~~svd~l~-~~~vd~~KIgS~-~~~N~pLL~~va~~gKPViLStG 166 (385)
T 1vli_A 92 LVQSMEMPAEWILPLLDYCREKQVIFLS---TVCDEGSADLLQ-STSPSAFKIASY-EINHLPLLKYVARLNRPMIFSTA 166 (385)
T ss_dssp HGGGBSSCGGGHHHHHHHHHHTTCEEEC---BCCSHHHHHHHH-TTCCSCEEECGG-GTTCHHHHHHHHTTCSCEEEECT
T ss_pred HHHhcCCCHHHHHHHHHHHHHcCCcEEE---ccCCHHHHHHHH-hcCCCEEEECcc-cccCHHHHHHHHhcCCeEEEECC
Confidence 3444455667888888776677787776 678877776543 567676677776 77899999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHHHHcCCceEEEEeCCccCC
Q psy15309 211 YGTDKLYWRVFDVYVQALVTSCVAPLEFFIEGTRSR 246 (258)
Q Consensus 211 ~~~~~ly~~vl~~yi~~ll~~g~~~l~iFpEGtRSr 246 (258)
...- .-+...++.+...|...| +.-+++|+-
T Consensus 167 maTl----~Ei~~Ave~i~~~Gn~~i-iLlhc~s~Y 197 (385)
T 1vli_A 167 GAEI----SDVHEAWRTIRAEGNNQI-AIMHCVAKY 197 (385)
T ss_dssp TCCH----HHHHHHHHHHHTTTCCCE-EEEEECSSS
T ss_pred CCCH----HHHHHHHHHHHHCCCCcE-EEEeccCCC
Confidence 7632 234455666666674234 444777764
No 3
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=59.09 E-value=13 Score=33.69 Aligned_cols=98 Identities=14% Similarity=0.124 Sum_probs=69.1
Q ss_pred ccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHHH
Q psy15309 138 NEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKLY 217 (258)
Q Consensus 138 ~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ly 217 (258)
..++.+.|.+..+...+.|++ |-+|.--+-++. .++.+.--|+++ |+-++|++..+.+...-+.+.|+...-
T Consensus 89 ~~e~~~~L~~~~~~~Gi~~~s---t~~d~~svd~l~-~~~v~~~KI~S~-~~~n~~LL~~va~~gkPviLstGmat~--- 160 (349)
T 2wqp_A 89 NEEDEIKLKEYVESKGMIFIS---TLFSRAAALRLQ-RMDIPAYKIGSG-ECNNYPLIKLVASFGKPIILSTGMNSI--- 160 (349)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE---EECSHHHHHHHH-HHTCSCEEECGG-GTTCHHHHHHHHTTCSCEEEECTTCCH---
T ss_pred CHHHHHHHHHHHHHhCCeEEE---eeCCHHHHHHHH-hcCCCEEEECcc-cccCHHHHHHHHhcCCeEEEECCCCCH---
Confidence 455777777666666777776 567766665543 467776677777 778999999999999999999997632
Q ss_pred HHHHHHHHHHHHHcCCceEEEEeCCccCC
Q psy15309 218 WRVFDVYVQALVTSCVAPLEFFIEGTRSR 246 (258)
Q Consensus 218 ~~vl~~yi~~ll~~g~~~l~iFpEGtRSr 246 (258)
.-+...++.+...|. .|.+. +++|+-
T Consensus 161 -~Ei~~Ave~i~~~G~-~iiLl-hc~s~Y 186 (349)
T 2wqp_A 161 -ESIKKSVEIIREAGV-PYALL-HCTNIY 186 (349)
T ss_dssp -HHHHHHHHHHHHHTC-CEEEE-ECCCCS
T ss_pred -HHHHHHHHHHHHcCC-CEEEE-eccCCC
Confidence 234455666777774 56554 788764
No 4
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=42.10 E-value=26 Score=31.74 Aligned_cols=99 Identities=17% Similarity=0.091 Sum_probs=68.4
Q ss_pred EEccchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcH
Q psy15309 136 YVNEEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDK 215 (258)
Q Consensus 136 ~v~~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ 215 (258)
....++.+.|.+..+...+.|++ |-+|.--+-++ -.+|.+.--|+++ |+-++|++..+.+...-+.+.|+.+.-
T Consensus 74 el~~e~~~~L~~~~~~~Gi~~~s---t~fD~~svd~l-~~~~v~~~KI~S~-~~~N~pLL~~va~~gKPviLstGmstl- 147 (350)
T 3g8r_A 74 RLQPEQMQKLVAEMKANGFKAIC---TPFDEESVDLI-EAHGIEIIKIASC-SFTDWPLLERIARSDKPVVASTAGARR- 147 (350)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEE---EECSHHHHHHH-HHTTCCEEEECSS-STTCHHHHHHHHTSCSCEEEECTTCCH-
T ss_pred cCCHHHHHHHHHHHHHcCCcEEe---ccCCHHHHHHH-HHcCCCEEEECcc-cccCHHHHHHHHhhCCcEEEECCCCCH-
Confidence 34556777787666666777776 56777666554 3567776677776 778999999999999999999997632
Q ss_pred HHHHHHHHHHHHHHHcCCceEEEEeCCccC
Q psy15309 216 LYWRVFDVYVQALVTSCVAPLEFFIEGTRS 245 (258)
Q Consensus 216 ly~~vl~~yi~~ll~~g~~~l~iFpEGtRS 245 (258)
.-+...++.+...|. .|.+. ..+|+
T Consensus 148 ---~Ei~~Ave~i~~~g~-~viLl-hC~s~ 172 (350)
T 3g8r_A 148 ---EDIDKVVSFMLHRGK-DLTIM-HCVAE 172 (350)
T ss_dssp ---HHHHHHHHHHHTTTC-CEEEE-ECCCC
T ss_pred ---HHHHHHHHHHHHcCC-CEEEE-ecCCC
Confidence 234445666666774 56553 45543
No 5
>2bsq_E FITA, trafficking protein A; transcription, transcription regulation complex, PIN domain, ribbon-helix-helix, DNA binding; HET: 5IU; 3.0A {Neisseria gonorrhoeae} SCOP: a.43.1.8 PDB: 2h1o_E*
Probab=34.38 E-value=60 Score=22.75 Aligned_cols=50 Identities=22% Similarity=0.177 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHhhcCCCcchhhhcccccHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHh
Q psy15309 65 SEETASIIHEFSLELSLPKEQFSLELSLPKEQIRLQVLDILNEIGYGRSLTVVRWLGLLLVKILKKT 131 (258)
Q Consensus 65 s~~v~~~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~il~em~~~~~~~~~r~~~~~l~~~~~~~ 131 (258)
++.+...++..|...|.+ ++++++.||.+..... ...-++..+..++..+
T Consensus 9 pd~~~~~Lk~rAa~~GrS--------------le~e~r~iL~~a~~~~---~~~~l~~~l~~~~~~~ 58 (77)
T 2bsq_E 9 SEATHNAIKFRARAAGRS--------------TEAEIRLILDNIAKAQ---QTVRLGSMLASIGQEI 58 (77)
T ss_dssp CHHHHHHHHHHHHHTTCC--------------HHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCC--------------HHHHHHHHHHHHHcCc---ccccHHHHHHHHHHhc
Confidence 466888999999999988 5688888888764321 1122344555555553
No 6
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=33.68 E-value=1.1e+02 Score=22.16 Aligned_cols=31 Identities=16% Similarity=0.089 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhccCCCHH-HHHHHHHHHHHH
Q psy15309 97 IRLQVLDILNEIGYGRSLT-VVRWLGLLLVKI 127 (258)
Q Consensus 97 ~~~~a~~il~em~~~~~~~-~~r~~~~~l~~~ 127 (258)
--..|-.+|+||+.+++.. ..|...|-+...
T Consensus 53 RAA~aIs~LDeISnDPNmP~h~RT~IW~ivS~ 84 (89)
T 2qsb_A 53 RCATVLSMLDEMANDPNVPAHGRTDLYTIISK 84 (89)
T ss_dssp HHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Confidence 3466888999999888765 558777655443
No 7
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=31.94 E-value=1e+02 Score=22.50 Aligned_cols=31 Identities=13% Similarity=0.051 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhccCCCHH-HHHHHHHHHHHH
Q psy15309 97 IRLQVLDILNEIGYGRSLT-VVRWLGLLLVKI 127 (258)
Q Consensus 97 ~~~~a~~il~em~~~~~~~-~~r~~~~~l~~~ 127 (258)
--..|-.+|+||+.+++.. ..|...|-+.-.
T Consensus 57 RAAtAIs~LDeISnDPNmP~htRT~IW~ivS~ 88 (94)
T 2qzg_A 57 RSATAIQYLDDISEDPNMPIHTRTQIWGIVSE 88 (94)
T ss_dssp HHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCChHHHHHHHHHHHH
Confidence 3467888999999887765 558777655443
No 8
>2k7r_A Primosomal protein DNAI; DNAI N-terminal domain, helicase-loading protein, ATP- binding, DNA replication, nucleotide-binding, primosome; NMR {Bacillus subtilis}
Probab=28.89 E-value=39 Score=24.84 Aligned_cols=20 Identities=20% Similarity=0.401 Sum_probs=17.0
Q ss_pred HHHHHHHhcCHHHHHHHHHH
Q psy15309 56 EVIKYNVLESEETASIIHEF 75 (258)
Q Consensus 56 ~~~~~~vl~s~~v~~~i~~~ 75 (258)
+.+++.|++||.|++-+++.
T Consensus 22 ~~~~~~vl~dP~V~~Fl~~h 41 (106)
T 2k7r_A 22 EQMKEKVMKDQDVQAFLKEN 41 (106)
T ss_dssp HHHHHHHTTCHHHHHHHHHS
T ss_pred HHHHHHHHcCHHHHHHHHHC
Confidence 45899999999999988753
No 9
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=26.77 E-value=1.1e+02 Score=19.45 Aligned_cols=18 Identities=11% Similarity=0.169 Sum_probs=15.6
Q ss_pred CHHHHHHHHHHHhhcCCC
Q psy15309 65 SEETASIIHEFSLELSLP 82 (258)
Q Consensus 65 s~~v~~~i~~~a~~~~~~ 82 (258)
++.+...|++.|.+.|.+
T Consensus 15 p~eL~~~l~~~A~~~grS 32 (53)
T 1baz_A 15 PREVLDLVRKVAEENGRS 32 (53)
T ss_dssp CHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHcCCC
Confidence 567889999999999988
No 10
>3h87_C Putative uncharacterized protein; toxin antitoxin complex, vapbc complex, RHH motif, structura genomics; 1.49A {Mycobacterium tuberculosis}
Probab=23.49 E-value=1.2e+02 Score=20.99 Aligned_cols=34 Identities=9% Similarity=0.071 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHhhcCCCcchhhhcccccHHHHHHHHHHHHHHhccCC
Q psy15309 65 SEETASIIHEFSLELSLPKEQFSLELSLPKEQIRLQVLDILNEIGYGR 112 (258)
Q Consensus 65 s~~v~~~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~il~em~~~~ 112 (258)
++.+..+|+..|...|.+ +++..+.+|.+.+...
T Consensus 10 pdev~~~L~~rAa~~G~S--------------~~~ylr~~Le~~a~~~ 43 (73)
T 3h87_C 10 PDDVLASLDAIAARLGLS--------------RTEYIRRRLAQDAQTA 43 (73)
T ss_dssp CHHHHHHHHHHHHHHTCC--------------HHHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHHcCCC--------------HHHHHHHHHHHHhcCC
Confidence 456788899999999988 4677788888876554
No 11
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=23.32 E-value=1.9e+02 Score=25.97 Aligned_cols=100 Identities=13% Similarity=0.106 Sum_probs=58.9
Q ss_pred cchhhhhhccCCCCCeEEecCCCCcchHHHHHHHHhhhCCCcceeeechhhhhhhHHHHHHHhCCcEEEEcCCCCcHHHH
Q psy15309 139 EEQLNKLRKQWGDNPVLFLPSHRSYGDFILMALLCFHYNIEIPCVAAGMDFHSMFLMGNMLRGCSAYFMRRTYGTDKLYW 218 (258)
Q Consensus 139 ~~g~e~L~~~~~~~pvV~v~nHrS~lD~lll~~~l~~~~l~~p~iaag~~l~~~p~ig~llr~~GaffI~R~~~~~~ly~ 218 (258)
.+|++.|+++.....+-+++ +.+|.--+.++. .+ .+.-.|.+. ++-+.|++..+.+...-+.+.|+.....
T Consensus 156 ~egl~~l~~~~~e~Gl~~~t---e~~d~~~~~~l~-~~-vd~lkIgAr-~~~n~~LL~~va~~~kPVilk~G~~~tl--- 226 (350)
T 1vr6_A 156 EKGLEYLREAADKYGMYVVT---EALGEDDLPKVA-EY-ADIIQIGAR-NAQNFRLLSKAGSYNKPVLLKRGFMNTI--- 226 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEE---ECSSGGGHHHHH-HH-CSEEEECGG-GTTCHHHHHHHHTTCSCEEEECCTTCCH---
T ss_pred HHHHHHHHHHHHHcCCcEEE---EeCCHHHHHHHH-Hh-CCEEEECcc-cccCHHHHHHHHccCCcEEEcCCCCCCH---
Confidence 35666666554433333333 334433333322 12 233345554 6667889999999889999999876331
Q ss_pred HHHHHHHHHHHHcCCceEEEEeCCccCCC
Q psy15309 219 RVFDVYVQALVTSCVAPLEFFIEGTRSRT 247 (258)
Q Consensus 219 ~vl~~yi~~ll~~g~~~l~iFpEGtRSrt 247 (258)
.-+...++.+...|...+.+.-.|+|+-.
T Consensus 227 ~ei~~Ave~i~~~GN~~viLceRG~~typ 255 (350)
T 1vr6_A 227 EEFLLSAEYIANSGNTKIILCERGIRTFE 255 (350)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCBCCSC
T ss_pred HHHHHHHHHHHHCCCCeEEEEeCCCCCCC
Confidence 22444566677778535777668988753
No 12
>4fxe_A Antitoxin RELB; toxin/antitoxin system, toxin, nuclease, translational contr response, RELB, ribosome, toxin-toxin inhibitor compl; 2.75A {Escherichia coli} PDB: 2k29_A 2kc8_B
Probab=22.14 E-value=94 Score=21.75 Aligned_cols=26 Identities=15% Similarity=0.268 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHhccCCCHHHHHHH
Q psy15309 95 EQIRLQVLDILNEIGYGRSLTVVRWL 120 (258)
Q Consensus 95 ~~~~~~a~~il~em~~~~~~~~~r~~ 120 (258)
++++++|.+++++++-+.+..+--++
T Consensus 10 ~~lK~~a~~v~~~lGl~~s~Ai~~fl 35 (79)
T 4fxe_A 10 DELKARSYAALEKMGVTPSEALRLML 35 (79)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 56889999999999888776544433
Done!