BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15310
(244 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42229|STA5A_HUMAN Signal transducer and activator of transcription 5A OS=Homo sapiens
GN=STAT5A PE=1 SV=1
Length = 794
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
NG +LD++Q +CE LAEIIW RQQI+ AE +L + P + ++L +NA
Sbjct: 262 AGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAE---HLCQQLPIPGPVEEMLAEVNA 318
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQV 241
IT +S LVTSTFIIEKQPPQV+KT T+F+ATVRLL G KLNV+M PPQV
Sbjct: 319 TITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQV 369
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MDQLLNTKIKALGQDRCQLADNLKETCFLIENTQGKILNVELLKWKREQQL 51
++ L + + L Q R +LA+ ++T L+ Q IL+ EL++WKR QQL
Sbjct: 211 LEAWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILDDELIQWKRRQQL 261
>sp|Q9TUZ1|STA5A_PIG Signal transducer and activator of transcription 5A OS=Sus scrofa
GN=STAT5A PE=2 SV=1
Length = 799
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
NG +LD++Q +CE LAEIIW RQQI+ AE +L + P + ++L +NA
Sbjct: 262 AGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAE---HLCQQLPIPGPVEEMLAEVNA 318
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQV 241
IT +S LVTSTFIIEKQPPQV+KT T+F+ATVRLL G KLNV+M PPQV
Sbjct: 319 TITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQV 369
Score = 33.9 bits (76), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MDQLLNTKIKALGQDRCQLADNLKETCFLIENTQGKILNVELLKWKREQQL 51
++ L + + L Q R +LA+ ++T L+ Q IL+ EL++WKR QQL
Sbjct: 211 LEAWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILDDELIQWKRRQQL 261
>sp|P51692|STA5B_HUMAN Signal transducer and activator of transcription 5B OS=Homo sapiens
GN=STAT5B PE=1 SV=2
Length = 787
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
NG +LD++Q +CE LAEIIW RQQI+ AE +L + P + ++L +NA
Sbjct: 262 AGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAE---HLCQQLPIPGPVEEMLAEVNA 318
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQV 241
IT +S LVTSTFIIEKQPPQV+KT T+F+ATVRLL G KLNV+M PPQV
Sbjct: 319 TITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQV 369
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MDQLLNTKIKALGQDRCQLADNLKETCFLIENTQGKILNVELLKWKREQQL 51
++ L + + L Q R +LA+ ++T L+ Q IL+ EL++WKR QQL
Sbjct: 211 LEAWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILDDELIQWKRRQQL 261
>sp|Q9TUZ0|STA5B_PIG Signal transducer and activator of transcription 5B OS=Sus scrofa
GN=STAT5B PE=2 SV=1
Length = 787
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
NG +LD++Q +CE LAEIIW RQQI+ AE +L + P + ++L +NA
Sbjct: 262 AGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAE---HLCQQLPIPGPVEEMLAEVNA 318
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQV 241
IT +S LVTSTFIIEKQPPQV+KT T+F+ATVRLL G KLNV+M PPQV
Sbjct: 319 TITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQV 369
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MDQLLNTKIKALGQDRCQLADNLKETCFLIENTQGKILNVELLKWKREQQL 51
++ L + + L Q R +LA+ ++T L+ Q IL+ EL++WKR QQL
Sbjct: 211 LEAWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILDDELIQWKRRQQL 261
>sp|Q95115|STA5A_BOVIN Signal transducer and activator of transcription 5A OS=Bos taurus
GN=STAT5A PE=2 SV=2
Length = 794
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
NG +LD++Q +CE LAEIIW RQQI+ AE +L + P + ++L +NA
Sbjct: 262 AGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAE---HLCQQLPIPGPVEEMLAEVNA 318
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQV 241
IT +S LVTSTFIIEKQPPQV+KT T+F+ATVRLL G KLNV+M PPQV
Sbjct: 319 TITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQV 369
Score = 33.9 bits (76), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MDQLLNTKIKALGQDRCQLADNLKETCFLIENTQGKILNVELLKWKREQQL 51
++ L + + L Q R +LA+ ++T L+ Q IL+ EL++WKR QQL
Sbjct: 211 LEAWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILDDELIQWKRRQQL 261
>sp|Q62771|STA5A_RAT Signal transducer and activator of transcription 5A OS=Rattus
norvegicus GN=Stat5a PE=1 SV=1
Length = 793
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
NG +LD++Q +CE LAEIIW RQQI+ AE +L + P + ++L +NA
Sbjct: 262 AGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAE---HLCQQLPIPGPVEEMLAEVNA 318
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQV 241
IT +S LVTSTFIIEKQPPQV+KT T+F+ATVRLL G KLNV+M PPQV
Sbjct: 319 TITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQV 369
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 1 MDQLLNTKIKALGQDRCQLADNLKETCFLIENTQGKILNVELLKWKREQQL 51
++ L + + L Q R +L + ++T L+ Q IL+ EL++WKR QQL
Sbjct: 211 LETWLQREAQTLQQYRVELVEKHQKTLQLLRKQQTIILDDELIQWKRGQQL 261
>sp|P42232|STA5B_MOUSE Signal transducer and activator of transcription 5B OS=Mus musculus
GN=Stat5b PE=1 SV=1
Length = 786
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
NG +LD++Q +CE LAEIIW RQQI+ AE +L + P + ++L +NA
Sbjct: 262 AGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAE---HLCQQLPIPGPVEEMLAEVNA 318
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQV 241
IT +S LVTSTFIIEKQPPQV+KT T+F+ATVRLL G KLNV+M PPQV
Sbjct: 319 TITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQV 369
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MDQLLNTKIKALGQDRCQLADNLKETCFLIENTQGKILNVELLKWKREQQL 51
++ L + + L Q R +LA+ ++T L+ Q IL+ EL++WKR QQL
Sbjct: 211 LETWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILDDELIQWKRRQQL 261
>sp|P42230|STA5A_MOUSE Signal transducer and activator of transcription 5A OS=Mus musculus
GN=Stat5a PE=1 SV=1
Length = 793
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
NG +LD++Q +CE LAEIIW RQQI+ AE +L + P + ++L +NA
Sbjct: 262 AGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAE---HLCQQLPIPGPVEEMLAEVNA 318
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQV 241
IT +S LVTSTFIIEKQPPQV+KT T+F+ATVRLL G KLNV+M PPQV
Sbjct: 319 TITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQV 369
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MDQLLNTKIKALGQDRCQLADNLKETCFLIENTQGKILNVELLKWKREQQL 51
++ L + + L Q R +LA+ ++T L+ Q IL+ EL++WKR QQL
Sbjct: 211 LETWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILDDELIQWKRRQQL 261
>sp|Q9TUM3|STA5B_BOVIN Signal transducer and activator of transcription 5B OS=Bos taurus
GN=STAT5B PE=2 SV=2
Length = 787
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
NG +LD++Q +CE LAEIIW RQQI+ AE + + P + ++L +NA
Sbjct: 262 AGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAE---HFCQQLPIPGPVEEMLAEVNA 318
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQV 241
IT +S LVTSTFIIEKQPPQV+KT T+F+ATVRLL G KLNV+M PPQV
Sbjct: 319 TITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQV 369
Score = 33.9 bits (76), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MDQLLNTKIKALGQDRCQLADNLKETCFLIENTQGKILNVELLKWKREQQL 51
++ L + + L Q R +LA+ ++T L+ Q IL+ EL++WKR QQL
Sbjct: 211 LEAWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILDDELIQWKRRQQL 261
>sp|P52632|STA5B_RAT Signal transducer and activator of transcription 5B OS=Rattus
norvegicus GN=Stat5b PE=2 SV=1
Length = 786
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
NG +LD++Q +CE LAEIIW RQQI+ RL++L + P + ++L +NA
Sbjct: 262 AGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIR---RLEHLCQQLPIPGPVEEMLAEVNA 318
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQV 241
IT +S L TSTFIIEKQPPQV+KT T+F+ATVRLL G KLNV+M PPQV
Sbjct: 319 TITDIISALSTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQV 369
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MDQLLNTKIKALGQDRCQLADNLKETCFLIENTQGKILNVELLKWKREQQL 51
++ L + + L Q R +LA+ ++T L+ Q IL+ EL++WKR QQL
Sbjct: 211 LETWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILDDELIQWKRRQQL 261
>sp|P42231|STA5A_SHEEP Signal transducer and activator of transcription 5A OS=Ovis aries
GN=STAT5A PE=1 SV=2
Length = 794
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 76/102 (74%), Gaps = 3/102 (2%)
Query: 140 TLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQITQCLSHL 199
+LD++Q +CE LAEIIW RQQI+ AE +L + P + ++L +NA IT +S L
Sbjct: 271 SLDVLQSWCEKLAEIIWQNRQQIRRAE---HLCQQLPIPGPVEEMLAEVNATITDIISAL 327
Query: 200 VTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQV 241
VTSTFIIEKQPPQV+KT T+F+ATVRLL G KLNV+M PPQV
Sbjct: 328 VTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQV 369
>sp|Q24151|STAT_DROME Signal transducer and transcription activator OS=Drosophila
melanogaster GN=Stat92E PE=1 SV=1
Length = 761
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 126 QQNDPVSNGARYN-CTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDV 184
Q NGA +N +LD IQ E L I +KE R++ L++ + P + +
Sbjct: 271 HQQAQAGNGAPFNEGSLDDIQRCFEMLESFIAHMLAAVKELMRVR-LVT---EEPELTHL 326
Query: 185 LPNLNAQITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQV 241
L Q+ +LV S FI++KQPPQVMKTNTRF+A+VR L GS+L ++ PP V
Sbjct: 327 L----EQVQNAQKNLVCSAFIVDKQPPQVMKTNTRFAASVRWLIGSQLGIHNNPPTV 379
>sp|P52633|STAT6_MOUSE Signal transducer and transcription activator 6 OS=Mus musculus
GN=Stat6 PE=2 SV=2
Length = 837
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
NG + +L +Q CESL EI +Q+I A S ++P ++ L+
Sbjct: 211 AGNGTPFEESLAGLQERCESLVEIYSQLQQEIGAA-------SGELEPKTRASLISRLD- 262
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSK-LNVYMTPPQV 241
+ L LVTS+F++EKQPPQV+KT T+F A VR L G + L PP V
Sbjct: 263 ---EVLRTLVTSSFLVEKQPPQVLKTQTKFQAGVRFLLGLQFLGTSAKPPMV 311
>sp|Q7QDU4|STAT_ANOGA Signal transducer and transcription activator OS=Anopheles gambiae
GN=Stat PE=2 SV=1
Length = 722
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 140 TLDMIQGYCESLAEIIWMTRQQIKEA--ERLKNLISKYVDPPNMVDVLPNLNAQITQCLS 197
+LD IQ + ESLA I+W T+ QI +L+ +S+ ++ L + + +
Sbjct: 231 SLDEIQTWYESLAAIMWNTKDQIHLTMKSQLREHVSQEINSD-----LWKVMKDVKDFIK 285
Query: 198 HLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNVYMTPPQVII 243
L+ FI+E QPPQVMK NTRF ATVRLL + L + + P+V +
Sbjct: 286 LLLHKAFIVENQPPQVMKMNTRFCATVRLLIDNALIMKIGNPKVTV 331
>sp|P42226|STAT6_HUMAN Signal transducer and activator of transcription 6 OS=Homo sapiens
GN=STAT6 PE=1 SV=1
Length = 847
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 12/112 (10%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
NGA + +L +Q CESL +I +Q++ A ++P +L
Sbjct: 211 AGNGAPFEESLAPLQERCESLVDIYSQLQQEVGAA-------GGELEPKTRA----SLTG 259
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSK-LNVYMTPPQV 241
++ + L LVTS F++EKQPPQV+KT T+F A VR L G + L PP V
Sbjct: 260 RLDEVLRTLVTSCFLVEKQPPQVLKTQTKFQAGVRFLLGLRFLGAPAKPPLV 311
>sp|Q19S50|STAT3_PIG Signal transducer and activator of transcription 3 OS=Sus scrofa
GN=STAT3 PE=1 SV=1
Length = 770
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 134 GARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQIT 193
G N LD ++ + SLAE TRQQIK+ E L+ +S DP +V P L +I
Sbjct: 253 GGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDP--IVQHRPMLEERIV 310
Query: 194 QCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
+ +L+ S F++E+QP P V+KT +F+ VRLL
Sbjct: 311 ELFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTTKVRLL 352
>sp|P40763|STAT3_HUMAN Signal transducer and activator of transcription 3 OS=Homo sapiens
GN=STAT3 PE=1 SV=2
Length = 770
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 134 GARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQIT 193
G N LD ++ + SLAE TRQQIK+ E L+ +S DP +V P L +I
Sbjct: 253 GGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDP--IVQHRPMLEERIV 310
Query: 194 QCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
+ +L+ S F++E+QP P V+KT +F+ VRLL
Sbjct: 311 ELFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTTKVRLL 352
>sp|P42227|STAT3_MOUSE Signal transducer and activator of transcription 3 OS=Mus musculus
GN=Stat3 PE=1 SV=2
Length = 770
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 134 GARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQIT 193
G N LD ++ + SLAE TRQQIK+ E L+ +S DP +V P L +I
Sbjct: 253 GGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDP--IVQHRPMLEERIV 310
Query: 194 QCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
+ +L+ S F++E+QP P V+KT +F+ VRLL
Sbjct: 311 ELFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTTKVRLL 352
>sp|Q6DV79|STAT3_CHICK Signal transducer and activator of transcription 3 OS=Gallus gallus
GN=STAT3 PE=1 SV=2
Length = 771
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 134 GARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQIT 193
G N LD ++ + SLAE TRQQIK+ E L+ +S DP +V P L +I
Sbjct: 253 GGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDP--IVQHRPMLEERIV 310
Query: 194 QCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
+ +L+ S F++E+QP P V+KT +F+ VRLL
Sbjct: 311 ELFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTTKVRLL 352
>sp|P61635|STAT3_BOVIN Signal transducer and activator of transcription 3 OS=Bos taurus
GN=STAT3 PE=2 SV=1
Length = 770
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 134 GARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQIT 193
G N LD ++ + SLAE TRQQIK+ E L+ +S DP +V P L +I
Sbjct: 253 GGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDP--IVQHRPMLEERIV 310
Query: 194 QCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
+ +L+ S F++E+QP P V+KT +F+ VRLL
Sbjct: 311 ELFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTTKVRLL 352
>sp|P52631|STAT3_RAT Signal transducer and activator of transcription 3 OS=Rattus
norvegicus GN=Stat3 PE=1 SV=1
Length = 770
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 134 GARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQIT 193
G N LD ++ + SLAE TRQQIK+ E L+ +S DP +V P L +I
Sbjct: 253 GGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDP--IVQHRPMLEERIV 310
Query: 194 QCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
+L+ S F++E+QP P V+KT +F+ VRLL
Sbjct: 311 DLFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTTKVRLL 352
>sp|Q7ZXK3|STA32_XENLA Signal transducer and activator of transcription 3.2 OS=Xenopus
laevis GN=stat3.2 PE=2 SV=1
Length = 766
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 134 GARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQIT 193
G N LD ++ + SLAE TRQQI++ E L+ +S DP +V P L +I
Sbjct: 253 GGPPNICLDRLENWITSLAESQLQTRQQIRKLEELQQKVSYKGDP--IVQHRPMLEERIV 310
Query: 194 QCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
+ +L+ S F++E+QP P V+KT +F+ VRLL
Sbjct: 311 ELFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTNKVRLL 352
>sp|Q9PVX8|STA31_XENLA Signal transducer and activator of transcription 3.1 OS=Xenopus
laevis GN=stat3.1 PE=1 SV=1
Length = 769
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 134 GARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQIT 193
G N LD ++ + SLAE RQQIK+ E L+ +S DP +V P L +I
Sbjct: 253 GGPPNICLDRLENWITSLAESQLQIRQQIKKLEELQQKVSYKGDP--IVQHRPMLEERIV 310
Query: 194 QCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
+ +L+ S F++E+QP P V+KT +F+ VRLL
Sbjct: 311 ELFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTNKVRLL 352
>sp|P52630|STAT2_HUMAN Signal transducer and activator of transcription 2 OS=Homo sapiens
GN=STAT2 PE=1 SV=1
Length = 851
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 130 PVSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDP-PNMVDVLPNL 188
P+ +G L+ ++ + + A++++ RQ +KE + L L+S DP VD+
Sbjct: 250 PIDHG------LEQLETWFTAGAKLLFHLRQLLKELKGLSCLVSYQDDPLTKGVDLR--- 300
Query: 189 NAQITQCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLLT 228
NAQ+T+ L L+ F++E QP P ++KT ++F+ RLL
Sbjct: 301 NAQVTELLQRLLHRAFVVETQPCMPQTPHRPLILKTGSKFTVRTRLLV 348
>sp|O02799|STAT2_PIG Signal transducer and activator of transcription 2 OS=Sus scrofa
GN=STAT2 PE=2 SV=1
Length = 864
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 134 GARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQIT 193
GA + L+ ++ + + A++++ RQ +KE + L +++ KY D + + L AQ+T
Sbjct: 248 GAPMDGELEQLEKWFTAEAKLLFHLRQLLKELKGLSSVV-KY-DEDLLFKGVDLLKAQVT 305
Query: 194 QCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLLT 228
+ L L+ FI+E QP P ++KT ++F+ RLL
Sbjct: 306 ELLQRLLHRAFIVETQPCMPQTPHRPLILKTGSKFTVRTRLLV 348
>sp|Q764M5|STAT1_PIG Signal transducer and activator of transcription 1 OS=Sus scrofa
GN=STAT1 PE=2 SV=1
Length = 757
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 134 GARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQIT 193
G N LD +Q + +AE + RQQ+K+ E L+ + DP + N A
Sbjct: 249 GGPPNACLDQLQNWFTIVAESLQQVRQQLKKLEELEQKYTYEHDP-----ITKNKQALWD 303
Query: 194 QCLS---HLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
+ S L+ S+F++E+QP P V+KT +F+ +RLL
Sbjct: 304 RTFSLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLL 348
>sp|P42224|STAT1_HUMAN Signal transducer and activator of transcription 1-alpha/beta
OS=Homo sapiens GN=STAT1 PE=1 SV=2
Length = 750
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 134 GARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPN---LNA 190
G N LD +Q + +AE + RQQ+K+ E L+ + DP + N L
Sbjct: 249 GGPPNACLDQLQNWFTIVAESLQQVRQQLKKLEELEQKYTYEHDP-----ITKNKQVLWD 303
Query: 191 QITQCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
+ L+ S+F++E+QP P V+KT +F+ +RLL
Sbjct: 304 RTFSLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLL 348
>sp|P42225|STAT1_MOUSE Signal transducer and activator of transcription 1 OS=Mus musculus
GN=Stat1 PE=1 SV=1
Length = 749
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 134 GARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQIT 193
G N LD +Q + +AE + RQQ+K+ E L+ + DP + L+ +
Sbjct: 249 GGPPNACLDQLQTWFTIVAETLQQIRQQLKKLEELEQKFTYEPDP--ITKNKQVLSDRTF 306
Query: 194 QCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
L+ S+F++E+QP P V+KT +F+ RLL
Sbjct: 307 LLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKSRLL 348
>sp|Q61AP6|STAT1_CAEBR Signal transducer and activator of transcription 1
OS=Caenorhabditis briggsae GN=sta-1 PE=3 SV=2
Length = 713
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 185 LPNLNAQITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNV 234
L ++ Q+ + L LV+ +FI+ QP V+KT +F VRLL G KL +
Sbjct: 180 LTTISEQLNRLLFVLVSQSFIVSVQPEPVLKTQHKFVTEVRLLIGDKLGI 229
>sp|Q9NAD6|STAT1_CAEEL Signal transducer and activator of transcription 1
OS=Caenorhabditis elegans GN=sta-1 PE=1 SV=2
Length = 706
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 182 VDVLPNLNAQITQCLSHLVTSTFIIEKQPPQVMKTNTRFSATVRLLTGSKLNV 234
+ L + Q+ + L LV+ +FI+ QP V+KT +F VRLL G KL +
Sbjct: 177 IGKLTAITEQLNKLLFMLVSQSFIVSVQPEPVLKTQHKFVTEVRLLIGDKLGI 229
>sp|Q14765|STAT4_HUMAN Signal transducer and activator of transcription 4 OS=Homo sapiens
GN=STAT4 PE=1 SV=1
Length = 748
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 16/108 (14%)
Query: 128 NDPVSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPN 187
P+ NG LD +Q LAE ++ R+Q+++ E ++ DP M +
Sbjct: 248 GGPLHNG------LDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYEGDPIPMQRT--H 299
Query: 188 LNAQITQCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
+ ++T + +L ++F++E+QP P V+KT +F+ +RLL
Sbjct: 300 MLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQFTVKLRLL 347
>sp|Q9WVL2|STAT2_MOUSE Signal transducer and activator of transcription 2 OS=Mus musculus
GN=Stat2 PE=1 SV=1
Length = 923
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 54/122 (44%), Gaps = 23/122 (18%)
Query: 121 EMRIVQQNDPVSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLK------NLISK 174
E ++ QQ + + ++ + + A+ ++ RQ +K+ + + ++ +K
Sbjct: 236 EWKVQQQKSCIGAPPPVKSAAEQLEQWLTAGAKFLFHLRQLLKQLKEMSCLRYQGDMFAK 295
Query: 175 YVDPPNMVDVLPNLNAQITQCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRL 226
VD NAQ+ + L L+ +F++E QP P ++KT +F+ RL
Sbjct: 296 GVD---------LRNAQVMELLQRLLQRSFVVETQPCMPQTLHRPLILKTGNKFTVRTRL 346
Query: 227 LT 228
L
Sbjct: 347 LV 348
>sp|Q2JTH3|MURC_SYNJA UDP-N-acetylmuramate--L-alanine ligase OS=Synechococcus sp. (strain
JA-3-3Ab) GN=murC PE=3 SV=1
Length = 510
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 12 LGQDRCQLADNLKETCFLIENTQGKILNVELLKWKREQQLQERRRLEAEEEVEEDIGKEH 71
LGQ R Q+ + + L G+ L +E L E R ++ EV+ ++G
Sbjct: 289 LGQLRLQVLGSHNLSNALAAVAVGRQLGLEFAVIA--SALAEFRGVQRRFEVKGEVGGVT 346
Query: 72 L---YSHDPRALFKTIQACLTQEMRIVQQNDPHLYSHDPRALFKTIQACLTQEMRIV 125
Y+H P + T++A Q+ R+V PH +S + LF+ C +V
Sbjct: 347 FIDDYAHHPSEIRATLRAARLQQRRVVAVFQPHRHSRLAK-LFQDFACCFADAQVVV 402
>sp|P42228|STAT4_MOUSE Signal transducer and activator of transcription 4 OS=Mus musculus
GN=Stat4 PE=1 SV=1
Length = 749
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
Query: 128 NDPVSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPN 187
P+ NG LD +Q LAE ++ RQQ+++ + ++ DP +P
Sbjct: 249 GGPLHNG------LDQLQNCFTLLAESLFQLRQQLEKLQEQSTKMTYEGDP------IPA 296
Query: 188 LNAQI----TQCLSHLVTSTFIIEKQP--------PQVMKTNTRFSATVRLL 227
A + T + +L ++F++E+QP P V+KT +F+ +RLL
Sbjct: 297 QRAHLLERATFLIYNLFKNSFVVERQPCMPTHPQRPMVLKTLIQFTVKLRLL 348
>sp|A3PGX7|COXZ_RHOS1 Cytochrome c oxidase assembly protein CtaG OS=Rhodobacter
sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=ctaG PE=3
SV=1
Length = 191
Score = 34.7 bits (78), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
V+ A YN T D GY +A T Q + ER++ ++ YVDP + D
Sbjct: 104 VAGTASYNVTPDAAGGYFAKIA-CFCFTEQVLAPGERVEMPVTFYVDPAIIDDPDGRYVR 162
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNT 218
QIT LS+ T + E+Q ++ T
Sbjct: 163 QIT--LSYTFHETALTEEQAALAAESAT 188
>sp|P56940|COXZ_RHOSH Cytochrome c oxidase assembly protein CtaG OS=Rhodobacter
sphaeroides GN=ctaG PE=1 SV=1
Length = 191
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
V+ A YN T D GY +A T Q + ER++ ++ YVDP + D
Sbjct: 104 VAGTASYNVTPDAAGGYFAKIA-CFCFTEQVLAPGERVEMPVTFYVDPAIIDDPDGRYVR 162
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNT 218
QIT LS+ T + E+Q ++ T
Sbjct: 163 QIT--LSYTFHETALTEEQAALAAESAT 188
>sp|Q3J5F7|COXZ_RHOS4 Cytochrome c oxidase assembly protein CtaG OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=ctaG PE=3 SV=1
Length = 191
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
V+ A YN T D GY +A T Q + ER++ ++ YVDP + D
Sbjct: 104 VAGTASYNVTPDAAGGYFAKIA-CFCFTEQVLAPGERVEMPVTFYVDPAIIDDPDGRYVR 162
Query: 191 QITQCLSHLVTSTFIIEKQPPQVMKTNT 218
QIT LS+ T + E+Q ++ T
Sbjct: 163 QIT--LSYTFHETALTEEQAALAAESAT 188
>sp|A4WQ59|COXZ_RHOS5 Cytochrome c oxidase assembly protein CtaG OS=Rhodobacter
sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=ctaG PE=3
SV=1
Length = 192
Score = 34.7 bits (78), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 131 VSNGARYNCTLDMIQGYCESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNA 190
V+ A YN T D GY +A T Q + ER++ +S YVDP + D
Sbjct: 104 VAGTASYNVTPDAAGGYFAKIA-CFCFTEQVLAPGERVEMPVSFYVDPAIVKDRDGRYVR 162
Query: 191 QITQCLSHLVTSTFIIEKQ 209
QIT LS+ T + E+Q
Sbjct: 163 QIT--LSYTFHQTELPEEQ 179
>sp|Q5TZK3|FAM74_HUMAN Protein FAM74A4/A6 OS=Homo sapiens GN=FAM74A4 PE=2 SV=1
Length = 123
Score = 34.3 bits (77), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 47 REQQLQERRRLEAEEEVEEDIGKEHLYSHD-PRALFKTIQACLTQEMRIVQQNDPHLYSH 105
R Q++ +RRR E+ E V E KE S P +K ++ CL ++++ VQ+ +
Sbjct: 37 RAQRMSQRRRGESSEAVPEKTWKELRNSETVPEKTWKQLRGCLQEDVQRVQRLSRRRHGE 96
Query: 106 DPRALFKTIQACLTQEMRIVQQNDPVSNGARYNCTLDMIQG 146
+A+ K + +E R G RY CT G
Sbjct: 97 SSKAVHKK----MWREFR----------GCRYCCTWLFFFG 123
>sp|B3EL67|ACCA_CHLPB Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Chlorobium phaeobacteroides (strain BS1) GN=accA PE=3
SV=1
Length = 335
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 12/65 (18%)
Query: 45 WKREQQLQERRRLEAEEEVE---------EDIGKEHLYSHDPRALFKTIQACLTQEMRIV 95
WK ++Q E +L AE+ +E E +G H HDP + T+++ L +E+R++
Sbjct: 253 WKFKEQAAEALKLTAEDLLEQKIVDRIIPEPLGGAH---HDPEKMADTVKSLLVEELRML 309
Query: 96 QQNDP 100
+ +P
Sbjct: 310 LEKNP 314
>sp|Q58427|Y1021_METJA Uncharacterized protein MJ1021 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1021 PE=4 SV=1
Length = 163
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 148 CESLAEIIWMTRQQIKEAERLKNLISKYVDPPNMVDVLPNLNAQITQC---LSHLVTSTF 204
E +AE+I + + KE ERL++L+ +Y+ + + L N+ L HL
Sbjct: 3 IERVAELILLKDKNFKEKERLRDLLREYIKTKDEISYLENILEDFENLDVNLKHLKRDAD 62
Query: 205 IIEKQPPQVMK-TNT-RFSATVRLLTG 229
II+ P++ K TN F V++L
Sbjct: 63 IIKSILPRLSKFTNIPVFMKIVKMLEA 89
>sp|A1BD33|SYA_CHLPD Alanine--tRNA ligase OS=Chlorobium phaeobacteroides (strain DSM
266) GN=alaS PE=3 SV=1
Length = 888
Score = 32.3 bits (72), Expect = 3.5, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 30 IENTQGKILNVELLKWKREQQLQERR---RLEAEEEVEEDIGKEHLYSHDPRALFKTIQA 86
IE GK E+L WK ++LQ+ R +L+A+EEV IG+ + + L K +Q
Sbjct: 702 IEALTGKA--AEVLLWKEYRELQDIRQMLKLKADEEV---IGRIAELADSKKELEKQLQV 756
Query: 87 CLTQEMRIVQQNDPHLYSHDPRALFKTI------QACLTQEMRIVQQNDPVSNG 134
T+ + + Q F T+ Q L Q + +++ DP S G
Sbjct: 757 YRTEALSGILQRSLDAAESVGSIRFMTLRLEHVDQDSLRQAVLALREKDPASTG 810
>sp|O94318|VPS20_SCHPO Vacuolar protein sorting-associated protein 20
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps20 PE=3 SV=1
Length = 226
Score = 30.8 bits (68), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 30/173 (17%)
Query: 43 LKWKREQQLQERRRLEAEEEVEEDIGKEHLYSHDPRALFKTIQACLTQEMRIVQQNDPHL 102
+K +R++ L+ +RLE E++E DI ++ L D R + ++A I Q +
Sbjct: 18 IKEQRDKLLRYSKRLEKIEQLEIDIARKCLRDSDKRGALRALKAKKLYSGLITQ---TYG 74
Query: 103 YSHDPRALFKTIQACLTQE------------MRIVQQNDPVSNGARYNCTLDMIQGYCES 150
+ L TI+ L Q+ +R +Q + P+ R D Y +
Sbjct: 75 QLGNIEQLLSTIEFTLIQKDVMFGLQEGTNLIRQLQADMPLERVGRICNDRDEAMSYVDE 134
Query: 151 LAEIIW--MTRQQI-------------KEAERLKNLISKYVDPPNMVDVLPNL 188
+ +++ M+R Q +E E++K+L P VDVLP++
Sbjct: 135 VNDMLQGRMSRDQEDEIQEELDSLIREQEDEKVKDLEKPGFTPSTGVDVLPSV 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,517,774
Number of Sequences: 539616
Number of extensions: 3325303
Number of successful extensions: 12594
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 12485
Number of HSP's gapped (non-prelim): 98
length of query: 244
length of database: 191,569,459
effective HSP length: 114
effective length of query: 130
effective length of database: 130,053,235
effective search space: 16906920550
effective search space used: 16906920550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)