Query psy15312
Match_columns 124
No_of_seqs 90 out of 92
Neff 2.9
Searched_HMMs 29240
Date Fri Aug 16 17:49:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15312.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15312hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q13_A Spondin-1; FS-domain, m 100.0 2.6E-31 8.9E-36 215.8 7.5 74 1-76 169-242 (258)
2 3d34_A Spondin-2; cell adhesio 99.9 2E-28 6.9E-33 194.3 6.0 62 1-62 161-222 (223)
3 2erw_A Serine protease inhibit 31.0 8.8 0.0003 23.6 -0.3 10 4-14 17-26 (56)
4 2eve_A Hypothetical protein ps 30.7 46 0.0016 25.1 3.6 27 34-60 77-104 (157)
5 3kr9_A SAM-dependent methyltra 28.4 9.8 0.00033 29.1 -0.5 9 1-9 20-28 (225)
6 1pce_A PEC-60; proteinase inhi 28.2 11 0.00036 23.6 -0.3 10 4-14 29-38 (60)
7 1ldt_L LDTI, tryptase inhibito 28.0 12 0.00041 22.5 -0.1 11 4-15 15-25 (46)
8 3lec_A NADB-rossmann superfami 26.6 11 0.00038 29.0 -0.5 9 1-9 26-34 (230)
9 2f3c_I Thrombin inhibitor infe 24.7 13 0.00045 22.8 -0.3 10 4-14 17-26 (55)
10 1tgs_I Pancreatic secretory tr 23.1 15 0.00051 22.5 -0.3 10 4-14 25-34 (56)
11 1r0r_I Ovomucoid, omtky3; high 22.7 15 0.00052 22.1 -0.3 10 4-14 20-29 (51)
12 1uvf_A Serine proteinase inhib 22.4 19 0.00064 22.6 0.0 11 4-15 29-39 (61)
13 3gnl_A Uncharacterized protein 21.9 15 0.00053 28.5 -0.5 9 1-9 26-34 (244)
14 1y1b_A Elastase inhibitor; non 21.8 11 0.00039 22.2 -1.0 10 4-14 17-26 (48)
15 3eop_A Thymocyte nuclear prote 21.8 86 0.003 24.2 3.7 29 27-55 77-110 (176)
16 2ar1_A Hypothetical protein; s 20.1 1.5E+02 0.005 22.6 4.6 27 34-60 95-122 (172)
No 1
>3q13_A Spondin-1; FS-domain, membrane targeting, AXON guidance, C2- derivative, glycosylated, extracellular matrix, cell adhesi; HET: NAG BMA; 1.95A {Homo sapiens}
Probab=99.97 E-value=2.6e-31 Score=215.81 Aligned_cols=74 Identities=27% Similarity=0.394 Sum_probs=70.7
Q ss_pred CCccCCCCCCccCCCCCCCCCCcceecccCCCCCCCCCCCCCCCCCCCCceEEEEEEEeeeeccccccCCCCcccC
Q psy15312 1 MDAGTDQGFTFTSPDYANEEPEPVFRIGLTTPDEPYGSFYYKNLTVLPTMAQFVITKVQEYTTKTNKAEHNKEDKS 76 (124)
Q Consensus 1 wDAGTDSG~TY~SPN~pT~P~e~I~rITS~~P~hPaspFYyP~~~~LpPiArl~l~R~r~y~~~~~~~~~~~~~~~ 76 (124)
|||||||||||+||||||+||++|++|||+ +||+||||||+|+.|||||||+|+|++++.++|+.+++...+..
T Consensus 169 yDAGTdsG~Ty~Spn~~t~P~~~I~~ITs~--~~p~spFY~p~~~~l~P~A~l~l~R~~~~~~~c~~~~~~~~~~~ 242 (258)
T 3q13_A 169 WDAGTDSGVTYESPNKPTIPQEKIRPLTSL--DHPQSPFYDPEGGSITQVARVVIERIARKGEQCNIVPDNVDDIV 242 (258)
T ss_dssp EECSSBCCCSTTCCCCBCSSCCCCEECCTT--SCTTSTTCCTTCCCCCCCEEEEEEEEEEESCCCCSSCCCCSCEE
T ss_pred ccCcccCCCCcCCCCCCCCCCceeEccCCC--CCCCCCCcCCCCCcCCCcEEEEEEEEeccCCccccCCCCHHHHh
Confidence 899999999999999999999999999996 89999999999999999999999999999999999998876643
No 2
>3d34_A Spondin-2; cell adhesion, extracellular matrix, immune response, polymorphism, secreted, immune system; 1.80A {Homo sapiens}
Probab=99.95 E-value=2e-28 Score=194.31 Aligned_cols=62 Identities=39% Similarity=0.747 Sum_probs=57.8
Q ss_pred CCccCCCCCCccCCCCCCCCCCcceecccCCCCCCCCCCCCCCCCCCCCceEEEEEEEeeee
Q psy15312 1 MDAGTDQGFTFTSPDYANEEPEPVFRIGLTTPDEPYGSFYYKNLTVLPTMAQFVITKVQEYT 62 (124)
Q Consensus 1 wDAGTDSG~TY~SPN~pT~P~e~I~rITS~~P~hPaspFYyP~~~~LpPiArl~l~R~r~y~ 62 (124)
||||||+|+||+|||||++||++|++||+++|+||++|||||+|+.|||||||+|+|+|+..
T Consensus 161 ~DAGTe~G~ty~spn~~t~P~~~i~~Its~~p~~p~~~Fy~~~~~~l~p~a~~~~~r~~~~~ 222 (223)
T 3d34_A 161 YDAGTDSGFTFSSPNFATIPQDTVTEITSSSPSHPANSFYYPRLKALPPIARVTLLRLRQSP 222 (223)
T ss_dssp EECSSBCCCSTTCCCCBCSSCCCCEECCSSSSCCTTCTTCCTTSSSCCCSEEEEEEEC----
T ss_pred ccccccCCCCCCCCCCCCCCCccceeccCCCCCCCCCcccCCCCCcCCceEEEEEEEEeccC
Confidence 89999999999999999999999999999999999999999999999999999999998854
No 3
>2erw_A Serine protease inhibitor infestin; kazal type domain, blood clotting, hydrolase inhibitor; 1.40A {Triatoma infestans} SCOP: g.68.1.1
Probab=30.97 E-value=8.8 Score=23.61 Aligned_cols=10 Identities=50% Similarity=1.036 Sum_probs=7.1
Q ss_pred cCCCCCCccCC
Q psy15312 4 GTDQGFTFTSP 14 (124)
Q Consensus 4 GTDSG~TY~SP 14 (124)
|+| |.||.|+
T Consensus 17 GsD-G~TY~n~ 26 (56)
T 2erw_A 17 GSD-GKTYGNP 26 (56)
T ss_dssp ETT-SCEESSH
T ss_pred CCC-CCEECCH
Confidence 565 7888775
No 4
>2eve_A Hypothetical protein pspto5229; alpha-beta protein, structural genomics, PSI, protein struct initiative; HET: MPO; 1.60A {Pseudomonas syringae PV} SCOP: b.122.1.8 PDB: 2g2x_A
Probab=30.75 E-value=46 Score=25.13 Aligned_cols=27 Identities=15% Similarity=0.086 Sum_probs=17.2
Q ss_pred CCCCCCCCCCCCCCCC-ceEEEEEEEee
Q psy15312 34 EPYGSFYYKNLTVLPT-MAQFVITKVQE 60 (124)
Q Consensus 34 hPaspFYyP~~~~LpP-iArl~l~R~r~ 60 (124)
||.|++|+|...+=.| .-.|.|.-++.
T Consensus 77 dp~s~YyDpks~~~~prw~~VdV~~v~~ 104 (157)
T 2eve_A 77 DPDSHYHDAKATTEKNPWSALDIGFVDI 104 (157)
T ss_dssp CTTSTTCCTTCCSSCCCCEEEEEEEEEE
T ss_pred cccCcCcCcccCCCCCCEEEEEEEEeee
Confidence 6889999999875444 44444444433
No 5
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=28.39 E-value=9.8 Score=29.09 Aligned_cols=9 Identities=33% Similarity=1.007 Sum_probs=5.2
Q ss_pred CCccCCCCC
Q psy15312 1 MDAGTDQGF 9 (124)
Q Consensus 1 wDAGTDSG~ 9 (124)
||.||++|+
T Consensus 20 lDIGtGsG~ 28 (225)
T 3kr9_A 20 LDVGSDHAY 28 (225)
T ss_dssp EEETCSTTH
T ss_pred EEeCCCcHH
Confidence 456666664
No 6
>1pce_A PEC-60; proteinase inhibitor(kazal type); NMR {Sus scrofa} SCOP: g.68.1.1
Probab=28.17 E-value=11 Score=23.62 Aligned_cols=10 Identities=60% Similarity=0.989 Sum_probs=7.6
Q ss_pred cCCCCCCccCC
Q psy15312 4 GTDQGFTFTSP 14 (124)
Q Consensus 4 GTDSG~TY~SP 14 (124)
|+| |.||.|+
T Consensus 29 Gsd-G~TY~n~ 38 (60)
T 1pce_A 29 GTD-GVTYESE 38 (60)
T ss_dssp ETT-SCEESSH
T ss_pred CCC-CCEECCH
Confidence 666 8888875
No 7
>1ldt_L LDTI, tryptase inhibitor; complex (hydrolase/inhibitor), hydrolase, inflammation; 1.90A {Hirudo medicinalis} SCOP: g.68.1.1 PDB: 1an1_I 2kmo_A 2kmp_A 2kmq_A 2kmr_A
Probab=27.98 E-value=12 Score=22.49 Aligned_cols=11 Identities=36% Similarity=0.682 Sum_probs=7.9
Q ss_pred cCCCCCCccCCC
Q psy15312 4 GTDQGFTFTSPD 15 (124)
Q Consensus 4 GTDSG~TY~SPN 15 (124)
|+| |.||.|+=
T Consensus 15 GsD-G~TY~n~C 25 (46)
T 1ldt_L 15 GSD-GRTYANSC 25 (46)
T ss_dssp CST-TCEESSHH
T ss_pred CCC-CCEECChh
Confidence 664 88888763
No 8
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=26.62 E-value=11 Score=29.02 Aligned_cols=9 Identities=33% Similarity=1.007 Sum_probs=5.1
Q ss_pred CCccCCCCC
Q psy15312 1 MDAGTDQGF 9 (124)
Q Consensus 1 wDAGTDSG~ 9 (124)
+|.|||+|+
T Consensus 26 lDIGtGsG~ 34 (230)
T 3lec_A 26 LDVGSDHAY 34 (230)
T ss_dssp EEETCSTTH
T ss_pred EEECCchHH
Confidence 356666664
No 9
>2f3c_I Thrombin inhibitor infestin; serine protease - inhibitor complex, kazal-type domain, hydrolase/hydrolase inhibitor complex; 2.50A {Triatoma infestans} SCOP: g.68.1.1 PDB: 1kma_A
Probab=24.68 E-value=13 Score=22.76 Aligned_cols=10 Identities=50% Similarity=1.129 Sum_probs=6.7
Q ss_pred cCCCCCCccCC
Q psy15312 4 GTDQGFTFTSP 14 (124)
Q Consensus 4 GTDSG~TY~SP 14 (124)
|+| |.||.|+
T Consensus 17 GsD-G~TY~n~ 26 (55)
T 2f3c_I 17 GSD-GNTYSNP 26 (55)
T ss_dssp ETT-SCEESSH
T ss_pred CCC-CCEECCH
Confidence 565 7788764
No 10
>1tgs_I Pancreatic secretory trypsin inhibitor (kazal type); complex (proteinase/inhibitor); 1.80A {Sus scrofa} SCOP: g.68.1.1 PDB: 1cgi_I 1hpt_A
Probab=23.06 E-value=15 Score=22.54 Aligned_cols=10 Identities=50% Similarity=1.029 Sum_probs=6.9
Q ss_pred cCCCCCCccCC
Q psy15312 4 GTDQGFTFTSP 14 (124)
Q Consensus 4 GTDSG~TY~SP 14 (124)
|+| |.||.++
T Consensus 25 GsD-G~TY~n~ 34 (56)
T 1tgs_I 25 GTD-GITYSNE 34 (56)
T ss_dssp ETT-SCEESSH
T ss_pred CCC-CCEECCC
Confidence 555 7888765
No 11
>1r0r_I Ovomucoid, omtky3; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Meleagris gallopavo} SCOP: g.68.1.1 PDB: 1sgr_I 2gkr_I 1cho_I 1omt_A 1omu_A 1ppf_I* 1tur_A 1tus_A 3sgb_I 2ovo_A 4ovo_A 1iy5_A 1cso_I 1ct4_I 2sgf_I 2gkt_I 2gkv_A 2nu0_I 1m8b_A 1m8c_A ...
Probab=22.72 E-value=15 Score=22.09 Aligned_cols=10 Identities=30% Similarity=0.557 Sum_probs=6.7
Q ss_pred cCCCCCCccCC
Q psy15312 4 GTDQGFTFTSP 14 (124)
Q Consensus 4 GTDSG~TY~SP 14 (124)
|+| |.||.++
T Consensus 20 GsD-G~TY~n~ 29 (51)
T 1r0r_I 20 GSD-NKTYGNK 29 (51)
T ss_dssp ETT-SCEESSH
T ss_pred CCC-CCEeCCH
Confidence 554 7888764
No 12
>1uvf_A Serine proteinase inhibitor kazal type 5; trypsin inhibitor, protease; NMR {Homo sapiens}
Probab=22.40 E-value=19 Score=22.57 Aligned_cols=11 Identities=45% Similarity=0.869 Sum_probs=7.7
Q ss_pred cCCCCCCccCCC
Q psy15312 4 GTDQGFTFTSPD 15 (124)
Q Consensus 4 GTDSG~TY~SPN 15 (124)
|+| |.||.++=
T Consensus 29 GsD-G~TY~n~C 39 (61)
T 1uvf_A 29 GDD-GQTYNNPC 39 (61)
T ss_dssp ETT-TEEESSSH
T ss_pred CCC-CCEECCHh
Confidence 565 88887763
No 13
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=21.93 E-value=15 Score=28.50 Aligned_cols=9 Identities=33% Similarity=0.844 Sum_probs=4.9
Q ss_pred CCccCCCCC
Q psy15312 1 MDAGTDQGF 9 (124)
Q Consensus 1 wDAGTDSG~ 9 (124)
+|.|||+|+
T Consensus 26 lDIGtGsG~ 34 (244)
T 3gnl_A 26 ADIGSDHAY 34 (244)
T ss_dssp EEETCSTTH
T ss_pred EEECCccHH
Confidence 355555554
No 14
>1y1b_A Elastase inhibitor; non-classical, kazal-type, protease inhibitor, CSH motif, hydrolase inhibitor; NMR {Synthetic} PDB: 1y1c_A
Probab=21.78 E-value=11 Score=22.21 Aligned_cols=10 Identities=40% Similarity=0.936 Sum_probs=6.4
Q ss_pred cCCCCCCccCC
Q psy15312 4 GTDQGFTFTSP 14 (124)
Q Consensus 4 GTDSG~TY~SP 14 (124)
|+| |.||.|+
T Consensus 17 Gsd-g~TY~n~ 26 (48)
T 1y1b_A 17 GSD-GITYGNA 26 (48)
T ss_dssp EET-TEEESBH
T ss_pred CCC-CCEECCH
Confidence 454 7777765
No 15
>3eop_A Thymocyte nuclear protein 1; unknown function, nucleus, phosphoprotein; 2.30A {Homo sapiens} SCOP: b.122.1.0
Probab=21.78 E-value=86 Score=24.17 Aligned_cols=29 Identities=14% Similarity=0.100 Sum_probs=18.4
Q ss_pred cccCCCC----CCCCCCCCCCCCCCCC-ceEEEE
Q psy15312 27 IGLTTPD----EPYGSFYYKNLTVLPT-MAQFVI 55 (124)
Q Consensus 27 ITS~~P~----hPaspFYyP~~~~LpP-iArl~l 55 (124)
+...||+ ||.||+|||...+=.| .--|.|
T Consensus 77 v~e~ypD~T~fDp~s~YyDpkS~~~~prW~~VdV 110 (176)
T 3eop_A 77 VKEAYPDHTQFEKNNPHYDPSSKEDNPKWSMVDV 110 (176)
T ss_dssp EEEEEECGGGTCTTSTTCCTTCCTTSCSCEEEEE
T ss_pred eeccccCCcccCCCCCCCCccCcCCCCCEEEEEE
Confidence 3444554 6899999999865444 333433
No 16
>2ar1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP, unknown F; 1.60A {Leishmania major} SCOP: b.122.1.8
Probab=20.07 E-value=1.5e+02 Score=22.65 Aligned_cols=27 Identities=7% Similarity=0.036 Sum_probs=17.1
Q ss_pred CCCCCCCCCCCCCC-CCceEEEEEEEee
Q psy15312 34 EPYGSFYYKNLTVL-PTMAQFVITKVQE 60 (124)
Q Consensus 34 hPaspFYyP~~~~L-pPiArl~l~R~r~ 60 (124)
||.|++|+|...+= |..-.|.|.-++.
T Consensus 95 dp~s~YyDpks~~~~prw~~VdV~~v~~ 122 (172)
T 2ar1_A 95 DKTSEYFDPKATKEKNPWKMVDVKFVAR 122 (172)
T ss_dssp CTTSTTCCTTCCSSCCCCEEEEEEEEEE
T ss_pred cccCcccCcccCCCCCCeEEEEEEEeee
Confidence 68899999998743 4344444444433
Done!