Query psy15312
Match_columns 124
No_of_seqs 90 out of 92
Neff 2.9
Searched_HMMs 13730
Date Fri Aug 16 17:49:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15312.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15312hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pj5a1 b.44.2.1 (A:743-830) N 53.5 2.5 0.00018 26.3 1.4 12 37-48 76-87 (88)
2 d2erwa1 g.68.1.1 (A:4-56) Bloo 23.6 6.7 0.00049 22.5 -0.3 10 4-14 14-23 (53)
3 d1m7xa2 b.71.1.1 (A:623-728) 1 21.6 21 0.0015 22.6 1.8 14 46-59 92-105 (106)
4 d1wf3a1 c.37.1.8 (A:3-180) GTP 20.2 15 0.0011 23.3 0.9 9 35-43 170-178 (178)
5 d1ldtl_ g.68.1.1 (L:) Leech de 19.7 10 0.00073 21.7 -0.1 10 4-14 15-24 (46)
6 d2vnud1 b.40.4.5 (D:400-494) E 19.4 28 0.002 21.6 2.1 46 51-107 47-92 (95)
7 d1f60a2 b.44.1.1 (A:335-441) E 15.5 40 0.0029 21.6 2.2 24 36-59 71-94 (107)
8 d1e88a3 g.27.1.1 (A:1-41) Fibr 15.3 15 0.0011 21.2 -0.1 9 5-13 6-14 (41)
9 d1lr7a2 g.68.1.1 (A:89-136) Do 14.3 20 0.0014 20.2 0.3 6 8-13 19-24 (48)
10 d1nnsa_ c.88.1.1 (A:) Asparagi 14.0 58 0.0043 24.0 3.0 45 10-54 170-218 (326)
No 1
>d1pj5a1 b.44.2.1 (A:743-830) N,N-dimethylglycine oxidase, C-terminal domain {Arthrobacter globiformis [TaxId: 1665]}
Probab=53.47 E-value=2.5 Score=26.25 Aligned_cols=12 Identities=25% Similarity=0.393 Sum_probs=10.1
Q ss_pred CCCCCCCCCCCC
Q psy15312 37 GSFYYKNLTVLP 48 (124)
Q Consensus 37 spFYyP~~~~Lp 48 (124)
-|||||.++.|.
T Consensus 76 ~P~yDP~~~r~r 87 (88)
T d1pj5a1 76 DPLYDPKMTRLR 87 (88)
T ss_dssp SCSSCTTCTTTC
T ss_pred cCCCCCCCcccC
Confidence 599999998874
No 2
>d2erwa1 g.68.1.1 (A:4-56) Blood-sucking insect-derived tryptase inhibitor {Triatoma infestans [TaxId: 30076]}
Probab=23.58 E-value=6.7 Score=22.50 Aligned_cols=10 Identities=50% Similarity=1.036 Sum_probs=5.6
Q ss_pred cCCCCCCccCC
Q psy15312 4 GTDQGFTFTSP 14 (124)
Q Consensus 4 GTDSG~TY~SP 14 (124)
|+| |.||.++
T Consensus 14 GsD-G~TY~N~ 23 (53)
T d2erwa1 14 GSD-GKTYGNP 23 (53)
T ss_dssp ETT-SCEESSH
T ss_pred CCC-CCEeCCH
Confidence 444 6666653
No 3
>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]}
Probab=21.55 E-value=21 Score=22.59 Aligned_cols=14 Identities=21% Similarity=0.446 Sum_probs=12.2
Q ss_pred CCCCceEEEEEEEe
Q psy15312 46 VLPTMAQFVITKVQ 59 (124)
Q Consensus 46 ~LpPiArl~l~R~r 59 (124)
.|||++-|.|.|.+
T Consensus 92 ~lPp~sav~~k~~~ 105 (106)
T d1m7xa2 92 TLPPLATIWLVREA 105 (106)
T ss_dssp EECTTEEEEEEEEC
T ss_pred EcCCCEEEEEEEcC
Confidence 47999999999875
No 4
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=20.22 E-value=15 Score=23.27 Aligned_cols=9 Identities=44% Similarity=1.187 Sum_probs=5.7
Q ss_pred CCCCCCCCC
Q psy15312 35 PYGSFYYKN 43 (124)
Q Consensus 35 PaspFYyP~ 43 (124)
|.+|||||.
T Consensus 170 pe~p~~~p~ 178 (178)
T d1wf3a1 170 PEGPFFYPE 178 (178)
T ss_dssp CBCCCSSCT
T ss_pred CCCCCCCCC
Confidence 456777763
No 5
>d1ldtl_ g.68.1.1 (L:) Leech derived tryptase inhibitor (LDTI-C) {Medicinal leech (Hirudo medicinalis) [TaxId: 6421]}
Probab=19.72 E-value=10 Score=21.71 Aligned_cols=10 Identities=40% Similarity=0.856 Sum_probs=6.6
Q ss_pred cCCCCCCccCC
Q psy15312 4 GTDQGFTFTSP 14 (124)
Q Consensus 4 GTDSG~TY~SP 14 (124)
|.| |+||.+|
T Consensus 15 G~D-G~TY~N~ 24 (46)
T d1ldtl_ 15 GSD-GRTYANS 24 (46)
T ss_dssp CST-TCEESSH
T ss_pred CCC-CCEECCH
Confidence 444 7888765
No 6
>d2vnud1 b.40.4.5 (D:400-494) Exosome complex exonuclease RRP44 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=19.37 E-value=28 Score=21.64 Aligned_cols=46 Identities=13% Similarity=0.180 Sum_probs=31.6
Q ss_pred eEEEEEEEeeeeccccccCCCCcccCCceeeeeeeeccCCccccccccccccccccc
Q psy15312 51 AQFVITKVQEYTTKTNKAEHNKEDKSNNETSTVSGILNNKNQTENDTKNELSVHDKT 107 (124)
Q Consensus 51 Arl~l~R~r~y~~~~~~~~~~~~~~~n~~~~~~s~~l~~~~~~~~~~~~~~~~~~~~ 107 (124)
...++.|+-.++.. ++.-.-.+..+||...+.+.++.--|..|+--
T Consensus 47 g~~Vvv~I~~w~~~-----------~~~P~G~i~~vLG~~gd~~~e~~~il~~~~ip 92 (95)
T d2vnud1 47 DKRIVISIDSWPTT-----------HKYPLGHFVRDLGTIESAQAETEALLLEHDVE 92 (95)
T ss_dssp TEEEEEEEEECCTT-----------CSSCEEEEEEEEEESSCSHHHHHHHHHHTTCC
T ss_pred CCEEEEEEeecCCC-----------CCCCCEEEEEEecCCCCcHHHHHHHHHHcCCC
Confidence 44556666555433 33445668899999999999988777777643
No 7
>d1f60a2 b.44.1.1 (A:335-441) Elongation factor eEF-1alpha, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=15.49 E-value=40 Score=21.61 Aligned_cols=24 Identities=8% Similarity=0.362 Sum_probs=19.8
Q ss_pred CCCCCCCCCCCCCCceEEEEEEEe
Q psy15312 36 YGSFYYKNLTVLPTMAQFVITKVQ 59 (124)
Q Consensus 36 aspFYyP~~~~LpPiArl~l~R~r 59 (124)
..|..--.....|+|+|+.|+...
T Consensus 71 ~~pi~vE~~~~~p~LGRf~lRd~g 94 (107)
T d1f60a2 71 SKPMCVEAFSEYPPLGRFAVRDMR 94 (107)
T ss_dssp SSCCCCCCTTTCGGGSEEEEEETT
T ss_pred CCCCEEeeccCCCCceeEEEEECC
Confidence 456888888999999999998643
No 8
>d1e88a3 g.27.1.1 (A:1-41) Fibronectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.35 E-value=15 Score=21.21 Aligned_cols=9 Identities=33% Similarity=0.730 Sum_probs=7.2
Q ss_pred CCCCCCccC
Q psy15312 5 TDQGFTFTS 13 (124)
Q Consensus 5 TDSG~TY~S 13 (124)
||||++|..
T Consensus 6 Td~Gv~Y~~ 14 (41)
T d1e88a3 6 TDSGVVYSV 14 (41)
T ss_dssp ETTTEEECS
T ss_pred ccCCeEEec
Confidence 789998864
No 9
>d1lr7a2 g.68.1.1 (A:89-136) Domain of follistatin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=14.26 E-value=20 Score=20.16 Aligned_cols=6 Identities=33% Similarity=0.645 Sum_probs=3.9
Q ss_pred CCCccC
Q psy15312 8 GFTFTS 13 (124)
Q Consensus 8 G~TY~S 13 (124)
|.||.|
T Consensus 19 g~TY~n 24 (48)
T d1lr7a2 19 GKTYRN 24 (48)
T ss_dssp SCEESS
T ss_pred CCEecc
Confidence 677765
No 10
>d1nnsa_ c.88.1.1 (A:) Asparaginase type II {Escherichia coli [TaxId: 562]}
Probab=13.97 E-value=58 Score=23.98 Aligned_cols=45 Identities=18% Similarity=0.148 Sum_probs=22.2
Q ss_pred CccCCCCCCCC---CCcceec-ccCCCCCCCCCCCCCCCCCCCCceEEE
Q psy15312 10 TFTSPDYANEE---PEPVFRI-GLTTPDEPYGSFYYKNLTVLPTMAQFV 54 (124)
Q Consensus 10 TY~SPN~pT~P---~e~I~rI-TS~~P~hPaspFYyP~~~~LpPiArl~ 54 (124)
+|.|||++-.= .+.+... ...-+.-+..+|..+.....|.++.|+
T Consensus 170 aF~s~~~~~Lg~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~p~V~il~ 218 (326)
T d1nnsa_ 170 TFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVY 218 (326)
T ss_dssp CEEETTTCCSEEEETTEEEECCCCCSCCGGGSCCCCTTCSCCCCEEEEE
T ss_pred ccccCCCCceEEEECCeEEEcccccccccCCccccccccccCCceEEEE
Confidence 48899877642 1122211 111122233556666666667665544
Done!