Query psy15314
Match_columns 232
No_of_seqs 192 out of 375
Neff 4.9
Searched_HMMs 13730
Date Fri Aug 16 17:52:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15314.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15314hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1cjaa_ d.144.1.3 (A:) Actin-f 77.2 1.3 9.6E-05 38.6 5.0 19 103-121 186-204 (342)
2 d1e7ua4 d.144.1.4 (A:726-1094) 68.8 2.5 0.00018 36.5 4.9 32 98-129 199-230 (369)
3 d1k0ia2 d.16.1.2 (A:174-275) p 26.9 4.3 0.00031 29.5 -0.9 20 183-202 6-25 (102)
4 d1ea0a1 b.80.4.1 (A:1203-1472) 12.5 14 0.001 30.7 -1.2 15 110-124 27-41 (270)
5 d1r1fa_ g.3.3.4 (A:) Palicoure 11.4 22 0.0016 20.6 -0.2 10 223-232 6-15 (37)
6 d1k82a3 g.39.1.8 (A:225-268) D 9.3 34 0.0025 20.4 0.2 15 26-40 1-15 (44)
7 d1pdnc_ a.4.1.5 (C:) Paired pr 9.2 45 0.0032 23.7 0.8 31 196-226 14-44 (123)
8 d1ofda1 b.80.4.1 (A:1240-1507) 8.9 22 0.0016 29.3 -1.2 16 109-124 27-42 (268)
9 d1a3aa_ d.112.1.1 (A:) Phospho 8.7 41 0.003 23.7 0.4 20 202-221 110-129 (145)
10 d2a9va1 c.23.16.1 (A:1-196) GM 7.9 51 0.0037 24.4 0.7 13 163-175 2-14 (196)
No 1
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=77.17 E-value=1.3 Score=38.57 Aligned_cols=19 Identities=42% Similarity=0.635 Sum_probs=17.5
Q ss_pred HHHHHHHhhhhhhhhcCCC
Q psy15314 103 QIQFERLVVLDYIIRNTDR 121 (232)
Q Consensus 103 ~~qfEkLvILDYiiRNTDR 121 (232)
-.++-|++.+|.+|+|-||
T Consensus 186 l~~LGkIiaFDifInN~DR 204 (342)
T d1cjaa_ 186 MQQLGSLMALDVIVNNSDR 204 (342)
T ss_dssp HHHHHHHHHHHHHHTCCSS
T ss_pred HHHhhhHHHHHHHHcCCcc
Confidence 3788899999999999999
No 2
>d1e7ua4 d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (PI3K), catalytic domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=68.76 E-value=2.5 Score=36.50 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=27.3
Q ss_pred hhHHHHHHHHHHhhhhhhhhcCCCCCCceEEE
Q psy15314 98 LALSFQIQFERLVVLDYIIRNTDRGNDNWLIK 129 (232)
Q Consensus 98 ~~~~F~~qfEkLvILDYiiRNTDRg~DNwLIk 129 (232)
.++.|-..+=-..|+=|++.=-|||+||+||.
T Consensus 199 ~~~nF~~S~A~~sv~~YiLGigDRH~~NILi~ 230 (369)
T d1e7ua4 199 AVERFVYSCAGYCVATFVLGIGDRHNDNIMIS 230 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCeeEEe
Confidence 45666666777889999999999999999996
No 3
>d1k0ia2 d.16.1.2 (A:174-275) p-Hydroxybenzoate hydroxylase (PHBH) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.93 E-value=4.3 Score=29.52 Aligned_cols=20 Identities=40% Similarity=0.728 Sum_probs=13.5
Q ss_pred CCCccccccccCCCCCCCHH
Q psy15314 183 RAYPYHWAWLPQAKVPFSIE 202 (232)
Q Consensus 183 r~ypf~W~~lP~a~~PFS~e 202 (232)
|.|||||+=+=...-|=++|
T Consensus 6 r~YPfgWLGiLaeapP~~~E 25 (102)
T d1k0ia2 6 RVYPFGWLGLLADTPPVSHE 25 (102)
T ss_dssp EEEEEEEEEEEESSCCSCSS
T ss_pred eeccchhhhhhhcCCCCCCc
Confidence 46999999765555555554
No 4
>d1ea0a1 b.80.4.1 (A:1203-1472) Alpha subunit of glutamate synthase, C-terminal domain {Azospirillum brasilense [TaxId: 192]}
Probab=12.53 E-value=14 Score=30.69 Aligned_cols=15 Identities=40% Similarity=0.499 Sum_probs=12.6
Q ss_pred hhhhhhhhcCCCCCC
Q psy15314 110 VVLDYIIRNTDRGND 124 (232)
Q Consensus 110 vILDYiiRNTDRg~D 124 (232)
|.++|-|+||||--+
T Consensus 27 v~~~~~I~N~dRsvG 41 (270)
T d1ea0a1 27 MQLAYNARNTQRAIG 41 (270)
T ss_dssp EEEEEEECTTCCSTT
T ss_pred EEEEEeeEecCcchh
Confidence 667999999999654
No 5
>d1r1fa_ g.3.3.4 (A:) Palicourein {Palicourea condensata [TaxId: 272141]}
Probab=11.40 E-value=22 Score=20.64 Aligned_cols=10 Identities=40% Similarity=0.604 Sum_probs=7.9
Q ss_pred ccCeeeeeeC
Q psy15314 223 LTPVQIFCTY 232 (232)
Q Consensus 223 ~l~~~~~~~~ 232 (232)
--||.++|||
T Consensus 6 tcrvipvcty 15 (37)
T d1r1fa_ 6 TCRVIPVCTY 15 (37)
T ss_dssp CCSSSCSCSS
T ss_pred ceeEeeeeee
Confidence 3588899987
No 6
>d1k82a3 g.39.1.8 (A:225-268) DNA repair protein MutM (Fpg) {Escherichia coli [TaxId: 562]}
Probab=9.27 E-value=34 Score=20.44 Aligned_cols=15 Identities=20% Similarity=0.219 Sum_probs=10.0
Q ss_pred cccceeeccccchhh
Q psy15314 26 AVGSFQMFVDGYKDA 40 (232)
Q Consensus 26 K~GSfQvfv~GykdA 40 (232)
|+|+||-.+.=|.++
T Consensus 1 k~G~Fq~~~~VYgR~ 15 (44)
T d1k82a3 1 KPGYFAQELQVYGRK 15 (44)
T ss_dssp CCCSCGGGCSSTTCT
T ss_pred CCCcCcceeEEeCCC
Confidence 678888766655543
No 7
>d1pdnc_ a.4.1.5 (C:) Paired protein (prd) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=9.22 E-value=45 Score=23.65 Aligned_cols=31 Identities=16% Similarity=-0.008 Sum_probs=22.0
Q ss_pred CCCCCHHHHHHhhhcccChHHHHHHhhccCe
Q psy15314 196 KVPFSIETRDLVQPLLADMNFVQDLCNLTPV 226 (232)
Q Consensus 196 ~~PFS~etr~~~lpllt~~~~~~~l~~~l~~ 226 (232)
+.|+|.+.|+.|+-+..+-.=..+++..+.|
T Consensus 14 GrpLs~dlR~rIv~~~~~G~s~r~iA~~~~V 44 (123)
T d1pdnc_ 14 GRPLPNNIRLKIVEMAADGIRPCVISRQLRV 44 (123)
T ss_dssp TSCCCHHHHHHHHHHHHTTCCHHHHHHHHTC
T ss_pred CcCCCHHHHHHHHHHHHhcCCHHHHHHHHCc
Confidence 7899999999999886554344455554443
No 8
>d1ofda1 b.80.4.1 (A:1240-1507) Alpha subunit of glutamate synthase, C-terminal domain {Synechocystis sp. [TaxId: 1143]}
Probab=8.88 E-value=22 Score=29.32 Aligned_cols=16 Identities=31% Similarity=0.322 Sum_probs=13.0
Q ss_pred HhhhhhhhhcCCCCCC
Q psy15314 109 LVVLDYIIRNTDRGND 124 (232)
Q Consensus 109 LvILDYiiRNTDRg~D 124 (232)
=|.++|-|+||||--+
T Consensus 27 ~~~~~~~I~N~~R~vG 42 (268)
T d1ofda1 27 TATKTYRLVNTDRTVG 42 (268)
T ss_dssp EEEEEEEECTTCCSTT
T ss_pred ceeEEEeeEecccchh
Confidence 4778999999999643
No 9
>d1a3aa_ d.112.1.1 (A:) Phosphotransferase IIa-mannitol {Escherichia coli [TaxId: 562]}
Probab=8.65 E-value=41 Score=23.70 Aligned_cols=20 Identities=15% Similarity=0.223 Sum_probs=14.8
Q ss_pred HHHHHhhhcccChHHHHHHh
Q psy15314 202 ETRDLVQPLLADMNFVQDLC 221 (232)
Q Consensus 202 etr~~~lpllt~~~~~~~l~ 221 (232)
+..+.+..++.|+++++.|.
T Consensus 110 ~~l~~l~~~l~d~~~~~~l~ 129 (145)
T d1a3aa_ 110 QVITSLTNALDDESVIERLA 129 (145)
T ss_dssp HHHHHHHHHTCSHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHH
Confidence 45566677788888888774
No 10
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=7.86 E-value=51 Score=24.39 Aligned_cols=13 Identities=23% Similarity=0.603 Sum_probs=10.9
Q ss_pred eEEeeecCCccCC
Q psy15314 163 IRLAAIDNGLAFP 175 (232)
Q Consensus 163 i~iaAIDNGLafP 175 (232)
.+|+.||||..|-
T Consensus 2 ~ki~iiD~g~~~~ 14 (196)
T d2a9va1 2 LKIYVVDNGGQWT 14 (196)
T ss_dssp CBEEEEEESCCTT
T ss_pred CEEEEEECCCcHH
Confidence 4799999998875
Done!