RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15316
         (145 letters)



>d1dl0a_ g.3.6.2 (A:) J-atracotoxin-hv1c {Australian funnel-web
          spider (Hadronyche versuta) [TaxId: 6904]}
          Length = 37

 Score = 25.1 bits (54), Expect = 0.88
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 36 CCPCCFGRACLIPNQG 51
          CCPCC G +C   + G
Sbjct: 13 CCPCCPGTSCKAESNG 28


>d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA
          {Mycobacterium tuberculosis [TaxId: 1773]}
          Length = 80

 Score = 24.0 bits (52), Expect = 3.6
 Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 7/48 (14%)

Query: 10 IGVFKPKDEE-------PYGRLNPKWTKWMHKLCCPCCFGRACLIPNQ 50
          +GV + K+           GR++      +  L       R    P Q
Sbjct: 6  VGVQRLKNGLNAVGVAPIAGRVSGTILTAVADLMARAGSDRIRFTPYQ 53


>d1agga_ g.3.6.2 (A:) omega-Agatoxin IV, IVa, IVb {Funnel web
          spider (Agelenopsis aperta) [TaxId: 6908]}
          Length = 48

 Score = 23.4 bits (50), Expect = 3.7
 Identities = 9/30 (30%), Positives = 11/30 (36%)

Query: 38 PCCFGRACLIPNQGYLSEAGASLVDQKLGL 67
           CC GR C     G   E    L+ + L  
Sbjct: 18 KCCRGRPCRCSMIGTNCECTPRLIMEGLSF 47


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.138    0.427 

Gapped
Lambda     K      H
   0.267   0.0476    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 537,914
Number of extensions: 22257
Number of successful extensions: 48
Number of sequences better than 10.0: 1
Number of HSP's gapped: 48
Number of HSP's successfully gapped: 4
Length of query: 145
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 68
Effective length of database: 1,350,386
Effective search space: 91826248
Effective search space used: 91826248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.3 bits)