BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15318
(566 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P11420|DA_DROME Protein daughterless OS=Drosophila melanogaster GN=da PE=1 SV=1
Length = 710
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 172/381 (45%), Positives = 208/381 (54%), Gaps = 82/381 (21%)
Query: 234 PADQSASSYSSNPSTPVSSPPPLSAQNSEWVSGPHASSPHFTSDHRGLHMSI---PEQQR 290
PADQS SS+ SNPSTPV+SPPPL+ V G P + H + P
Sbjct: 291 PADQSISSFGSNPSTPVNSPPPLT---QSVVGG--GGEPSVSGGSGWGHSVLNGGPSSSY 345
Query: 291 LDEAIGYLRSHTEG-------MEECLDDAINVIRNHADGQL------------NLPGLSH 331
E + HT MEE LDDA+NV+RNH + ++ N+ L+
Sbjct: 346 ASEMVPVSSLHTMASVFQGVRMEERLDDALNVLRNHCEPEMLAGVNQSLASIDNIDALTS 405
Query: 332 PSPG------------------GSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSSDTDG 373
P + L H+ L A ++ G LAS
Sbjct: 406 FVPNSPSHLGSGGNSGSVSNTSNAALVHEVLALGAAAAAGTSGQSVGGAGSLAS------ 459
Query: 374 HIKIENIANSS-----KKRKELTIDTK--------TESICSDQMNSVTSPTNS------- 413
+K++ A++S KKRKE T + T S+ S + S T PT+S
Sbjct: 460 -LKLDRSASTSLPKQTKKRKEHTAISNSVPAGVSTTSSLTSLDI-SDTKPTSSIESSNSG 517
Query: 414 ----TSNKGSKRSRRYCSSADEDSE-DPQTKAMREKERRQANNVRERIRIRDINEALKEL 468
+ KG+KR RRYCSSADED + +P KA+REKERRQANN RERIRIRDINEALKEL
Sbjct: 518 LQQHSQGKGTKRPRRYCSSADEDDDAEPAVKAIREKERRQANNARERIRIRDINEALKEL 577
Query: 469 GRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGP 528
GRMCM HLK+DKPQTKLGILNMAVEVIM+LEQQVRERNLNPKAACL+RREEEKAED GP
Sbjct: 578 GRMCMTHLKSDKPQTKLGILNMAVEVIMTLEQQVRERNLNPKAACLKRREEEKAED--GP 635
Query: 529 KLG--HHLSAVSQHMGIQPPS 547
KL HH+ Q +G P S
Sbjct: 636 KLSAQHHMIPQPQQVGGTPGS 656
>sp|P51514|HTF4_RAT Transcription factor 12 OS=Rattus norvegicus GN=Tcf12 PE=2 SV=1
Length = 707
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/403 (40%), Positives = 213/403 (52%), Gaps = 79/403 (19%)
Query: 185 LPPMSTIRNPAAASGVQSPSLYPGHNSPI------VQTTGPGPG-----DTVGKALASIY 233
LPPMS+ + +S SP + H PI + T G G D +GKALASIY
Sbjct: 291 LPPMSSFHRGSTSS---SPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIY 347
Query: 234 PADQSASSYSSNPSTPVSSPPPLSAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQ--Q 289
D ++SS+ SNPSTPV SP PL+A S+W G SSP + + L + +Q +
Sbjct: 348 SPDHTSSSFPSNPSTPVGSPSPLTAGTSQWPRAGGQAPSSPSYENSLHSLKNRVEQQLHE 407
Query: 290 RLDEAIGYLR-----SHTEGMEECLDDAINVIRNHADG-QLNLP----------GLSHPS 333
L +A+ +L+ S E + LDDAI+V+RNHA G +LP G SH +
Sbjct: 408 HLQDAMSFLKDVCEQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPTSHSDIHSLLGPSHNA 467
Query: 334 PGGSL-----------------LYHQHL-------GNSHAVSSTVGA--------IPAGY 361
P G+L + H GN +SSTV A P +
Sbjct: 468 PIGNLNSNYGGSSLVTNSRSASMVGTHREDSVSLNGNHSVLSSTVAASNTELNHKTPESF 527
Query: 362 LAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMNSVTSPTNSTSNKGSKR 421
G+ + S G + I +K++ E E SD M S + +S K K
Sbjct: 528 RGGVQNQS---GSVVPTEIKTENKEKDE----NLHEPPSSDDMKS----DDESSQKDIKV 576
Query: 422 SRRYCSSADEDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTD 479
S R +S+ + ED P+ K REKERR ANN RER+R+RDINEA KELGRMC HLK++
Sbjct: 577 SSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSE 636
Query: 480 KPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKA 522
KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK
Sbjct: 637 KPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKV 679
>sp|Q60420|HTF4_MESAU Transcription factor 12 (Fragment) OS=Mesocricetus auratus GN=TCF12
PE=2 SV=2
Length = 437
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 165/403 (40%), Positives = 212/403 (52%), Gaps = 80/403 (19%)
Query: 185 LPPMSTIRNPAAASGVQSPSLYPGHNSPI--------VQTTGPG---PGDTVGKALASIY 233
LPPMS+ + +S SP + H PI + G GD +GKALASIY
Sbjct: 22 LPPMSSFHRGSTSS---SPYVAASHTPPINGSDSILGARGNAAGSSQTGDALGKALASIY 78
Query: 234 PADQSASSYSSNPSTPVSSPPPLSAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQ--Q 289
D ++SS+ SNPSTPV SP PL+ S+W G SSP + + L + +Q +
Sbjct: 79 SPDHTSSSFPSNPSTPVGSPSPLTG-TSQWPRAGGQAPSSPSYENSLHSLKNRVEQQLHE 137
Query: 290 RLDEAIGYLR-----SHTEGMEECLDDAINVIRNHADG-QLNLP----------GLSHPS 333
L +A+ +L+ S E + LDDAI+V+RNHA G +LP G SH +
Sbjct: 138 HLQDAMSFLKDVCEQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPTSHSDIHSLLGPSHNA 197
Query: 334 PGGSL-----------------LYHQHL-------GNSHAVSSTVGA--------IPAGY 361
P G+L + H GN +SSTV A P Y
Sbjct: 198 PIGNLNSNYGGSSLVTNSRSASMVGTHREDSVNLNGNHSVLSSTVAASNTDLNHKTPENY 257
Query: 362 LAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMNSVTSPTNSTSNKGSKR 421
GL + S G++ I +K++ E E SD M S + +S K K
Sbjct: 258 RGGLQNQS---GNVVPTEIKTENKEKDE----NLHEPPSSDDMKS----DDESSQKDIKV 306
Query: 422 SRRYCSSADEDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTD 479
S R +S+ + ED P+ K REKERR ANN RER+R+RDINEA KELGRMC HLK++
Sbjct: 307 SSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSE 366
Query: 480 KPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKA 522
KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK
Sbjct: 367 KPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKV 409
>sp|P30985|HTF4_CHICK Transcription factor 12 (Fragment) OS=Gallus gallus GN=TCF12 PE=2
SV=2
Length = 657
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 172/405 (42%), Positives = 215/405 (53%), Gaps = 81/405 (20%)
Query: 185 LPPMSTIRNPAAASGVQSPSLYPGHNSP------IVQTTGPGPG-----DTVGKALASIY 233
LPPMS+ + +S SP + H P IV T G G G D +GKALASIY
Sbjct: 239 LPPMSSFHRGSTSS---SPYVAASHTPPVNGSDSIVGTKGNGAGGSQTGDALGKALASIY 295
Query: 234 PADQSASSYSSNPSTPVSSPPPLSAQNSEWVSGPHA-SSPHFTSDHRGLHMSIPEQ--QR 290
D ++SS+ SNPSTPV SP PL+ + SG A SSP++ + L + +Q +
Sbjct: 296 SPDHTSSSFPSNPSTPVGSPSPLTGASQWSRSGGQAPSSPNYENSLHSLKNRVEQQLHEH 355
Query: 291 LDEAIGYLR-----SHTEGMEECLDDAINVIRNHADG-----------QLNLPGLSHPSP 334
L +A+ +L+ S E + LDDAI+V+RNHA G +L G SH P
Sbjct: 356 LQDAMSFLKDVCEQSRMEDRLDRLDDAIHVLRNHAVGPSTSLSGGHGDIHSLLGPSHNGP 415
Query: 335 GGSL-----------------LYHQH------LGNSHAVS-STVGA--------IPAGYL 362
GSL + H L ++HAV STV A Y
Sbjct: 416 IGSLNSSYGASSLVAANRQASMVAAHREESVSLNSNHAVLPSTVSAQSTELNHKTQESYR 475
Query: 363 A---GLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMNSVTSPTNSTSNKGS 419
A GL S S G +I+ S K K+ I E SD M S + +S K
Sbjct: 476 ALSGGLQSQSVAIGPTEIK----SEHKEKDENIH---EPPSSDDMKS----DDESSQKDI 524
Query: 420 KRSRRYCSSADEDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLK 477
K S R +S+ + ED P+ K REKERR ANN RER+R+RDINEA KELGRMC HLK
Sbjct: 525 KVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLK 584
Query: 478 TDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKA 522
++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK
Sbjct: 585 SEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKV 629
>sp|Q61286|HTF4_MOUSE Transcription factor 12 OS=Mus musculus GN=Tcf12 PE=1 SV=2
Length = 706
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 216/394 (54%), Gaps = 62/394 (15%)
Query: 185 LPPMSTIRNPAAASGVQSPSLYPGHNSPI------VQTTGPGPG-----DTVGKALASIY 233
LPPMS+ + +S SP + H PI + T G G D +GKALASIY
Sbjct: 291 LPPMSSFHRGSTSS---SPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIY 347
Query: 234 PADQSASSYSSNPSTPVSSPPPLSAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQ--Q 289
D ++SS+ SNPSTPV SP PL+ S+W G SSP + + L + +Q +
Sbjct: 348 SPDHTSSSFPSNPSTPVGSPSPLTG-TSQWPRAGGQAPSSPSYENSLHSLKNRVEQQLHE 406
Query: 290 RLDEAIGYLR-----SHTEGMEECLDDAINVIRNHADG-QLNLP----------GLSHPS 333
L +A+ +L+ S E + LDDAI+V+RNHA G +LP G SH +
Sbjct: 407 HLQDAMSFLKDVCEQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPTSHSDIHSLLGPSHNA 466
Query: 334 PGGSLLYHQHLGNSHAVSSTVGAIPAG--------------YLAGLASSSDTD-GHIKIE 378
G+L + + G S V+++ A G L+ ++S+T+ H E
Sbjct: 467 SIGNL--NSNYGGSSLVTNSRSASMVGTHREDSVSLNGNHSVLSSTVAASNTELNHKTPE 524
Query: 379 NIANSSKKRKELTIDTKTESICSDQMNSVTSPTNS--------TSNKGSKRSRRYCSSAD 430
N + + + T+ ++ ++ ++ P +S +S K K S R +S+
Sbjct: 525 NFRGGVQNQSGSVVPTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSST 584
Query: 431 EDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGIL 488
+ ED P+ K REKERR ANN RER+R+RDINEA KELGRMC HLK++KPQTKL IL
Sbjct: 585 NEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLIL 644
Query: 489 NMAVEVIMSLEQQVRERNLNPKAACLRRREEEKA 522
+ AV VI+SLEQQVRERNLNPKAACL+RREEEK
Sbjct: 645 HQAVAVILSLEQQVRERNLNPKAACLKRREEEKV 678
>sp|Q99081|HTF4_HUMAN Transcription factor 12 OS=Homo sapiens GN=TCF12 PE=1 SV=1
Length = 682
Score = 205 bits (521), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 201/396 (50%), Gaps = 90/396 (22%)
Query: 185 LPPMSTIRNPAAASGVQSPSLYPGHNSPI------VQTTGPGPG-----DTVGKALASIY 233
LPPMS+ + +S SP + H PI + T G G D +GKALASIY
Sbjct: 291 LPPMSSFHRGSTSS---SPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIY 347
Query: 234 PADQSASSYSSNPSTPVSSPPPLSAQNSEWVSGPHASSPHFTSDHRGLHMSIPEQQRLDE 293
D ++SS+ SNPSTPV SP PL+ S+W P +P S LH
Sbjct: 348 SPDHTSSSFPSNPSTPVGSPSPLTG-TSQWPR-PGGQAPSSPSYENSLH----------- 394
Query: 294 AIGYLRSHTEGMEECLDDAINVIRNHADG-QLNLP----------GLSHPSPGGSLLYHQ 342
L+S E + LDDAI+V+RNHA G +LP G SH +P GSL +
Sbjct: 395 ---SLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSL--NS 449
Query: 343 HLGNSHAVSSTVGAIPAG----------------------------------YLAGLASS 368
+ G S V+S+ A G Y GL S
Sbjct: 450 NYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQ 509
Query: 369 SDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMNSVTSPTNSTSNKGSKRSRRYCSS 428
S G + I +K++ E E SD M S + +S K K S R +S
Sbjct: 510 S---GTVVTTEIKTENKEKDE----NLHEPPSSDDMKS----DDESSQKDIKVSSRGRTS 558
Query: 429 ADEDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLG 486
+ + ED P+ K REKERR ANN RER+R+RDINEA KELGRMC HLK++KPQTKL
Sbjct: 559 STNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLL 618
Query: 487 ILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKA 522
IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK
Sbjct: 619 ILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKV 654
>sp|P21677|TFE2_RAT Transcription factor E2-alpha OS=Rattus norvegicus GN=Tcf3 PE=1
SV=1
Length = 649
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 160/382 (41%), Positives = 201/382 (52%), Gaps = 59/382 (15%)
Query: 194 PAAASGVQSPSLYPG---HNSPIVQ---------TTGPGPGDTVGKALASIYPADQSASS 241
PA +S +P Y G H P+ TT GD +GKALASIY D S+++
Sbjct: 285 PAVSSFSAAPGTYSGTSGHTPPVSGADSLLGTRGTTASSSGDALGKALASIYSPDHSSNN 344
Query: 242 YSSNPSTPVSSPPPLSAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLR 299
+S +PSTPV SP L S+W P A SP++ + GLH + RLDEAI LR
Sbjct: 345 FSPSPSTPVGSPQGLPG-TSQWPRAGAPSALSPNYDA---GLHGLSKMEDRLDEAIHVLR 400
Query: 300 SHTEGMEECLDDAI---NVIRNHADGQLNLPGL-------SHPSPG---GSLLYHQHLGN 346
SH G L + + + G ++L G SHP G G+ L H H
Sbjct: 401 SHAVGTASELHGLLPGHSTLTTSFAGPMSLGGRHAGLVSGSHPEDGLTSGASLLHNHASL 460
Query: 347 SHAVSST--VGAIPAGYLAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQM 404
SS + P +GL + T G +I KR+E +
Sbjct: 461 PSQPSSLPDLSQRPPDSFSGLGRAGVTAGASEI--------KREE------------KED 500
Query: 405 NSVTSPTNSTSNKGSKRSRRYCSSADEDSED---PQTKAMREKERRQANNVRERIRIRDI 461
VTS ++ +K + R +S DED +D P+ KA REKERR ANN RER+R+RDI
Sbjct: 501 EEVTSVADAEEDKKDLKVPRTRTSPDEDEDDLLPPEQKAEREKERRVANNARERLRVRDI 560
Query: 462 NEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEK 521
NEA KELGRMC HL T+KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK
Sbjct: 561 NEAFKELGRMCQLHLSTEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEK 620
Query: 522 AEDSVG-PKLGHHLSAVSQHMG 542
VG P+L LSA +G
Sbjct: 621 VSGVVGDPQLA--LSAAHPGLG 640
>sp|P15806|TFE2_MOUSE Transcription factor E2-alpha OS=Mus musculus GN=Tcf3 PE=1 SV=2
Length = 651
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 188/348 (54%), Gaps = 47/348 (13%)
Query: 216 TTGPGPGDTVGKALASIYPADQSASSYSSNPSTPVSSPPPLSAQNSEW--VSGPHASSPH 273
TT GD +GKALASIY D S++++S +PSTPV SP L S+W P A SP+
Sbjct: 321 TTASSSGDALGKALASIYSPDHSSNNFSPSPSTPVGSPQGLPG-TSQWPRAGAPSALSPN 379
Query: 274 FTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAI---NVIRNHADGQLNLPGL- 329
+ + GLH + RLDEAI LRSH G L + + G ++L G
Sbjct: 380 YDA---GLHGLSKMEDRLDEAIHVLRSHAVGTASDLHGLLPGHGALTTSFTGPMSLGGRH 436
Query: 330 ------SHPSPG---GSLLYHQHLGNSHAVSST--VGAIPAGYLAGLASSSDTDGHIKIE 378
SHP G G+ L H H SS + P +GL + T G +I
Sbjct: 437 AGLVGGSHPEEGLTSGASLLHNHASLPSQPSSLPDLSQRPPDSYSGLGRAGTTAGASEI- 495
Query: 379 NIANSSKKRKELTIDTKTESICSDQMNSVTSPTNSTSNKGSKRSRRYCSSADEDSED--- 435
KR+E + + S ++ +K + R +S DED +D
Sbjct: 496 -------KREE------------KEDEEIASVADAEEDKKDLKVPRTRTSPDEDEDDLLP 536
Query: 436 PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVI 495
P+ KA REKERR ANN RER+R+RDINEA KELGRMC HL ++KPQTKL IL+ AV VI
Sbjct: 537 PEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLSSEKPQTKLLILHQAVAVI 596
Query: 496 MSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLGHHLSAVSQHMG 542
+SLEQQVRERNLNPKAACL+RREEEK VG P+L LSA +G
Sbjct: 597 LSLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQLA--LSAAHPGLG 642
>sp|Q62655|ITF2_RAT Transcription factor 4 OS=Rattus norvegicus GN=Tcf4 PE=2 SV=2
Length = 589
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 153/414 (36%), Positives = 200/414 (48%), Gaps = 73/414 (17%)
Query: 183 SPLPPMSTIRNPAAASGVQSPSLYPGHNS-PIVQTTGPGP------GDTVGKALASIYPA 235
S LPPMST S P + + I+ G G GD +GKALASIY
Sbjct: 193 SSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGTGAAGSSQTGDALGKALASIYSP 252
Query: 236 DQSASSYSSNPSTPVSSPPPLSAQNSEWV--SGPHASSPHFTSDHRGLHMSIPEQQRLDE 293
D + +S+SSNPSTPV SPP LSA + W G +SSP++ +
Sbjct: 253 DHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNY-----------------EG 295
Query: 294 AIGYLRSHTEGMEECLDDAINVIRNHA--------DGQLNLPGLSHPSPGGSLL-----Y 340
+ L+S E E LDDAI+V+RNHA G ++ G+ PS G++ Y
Sbjct: 296 PLHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAVPGGHGDMHGIIGPSHNGAMGSLGSGY 355
Query: 341 HQHLGNSHAVSSTVGAIPAGYLAGLASSSDTDGHIKIENI-------------------- 380
L +++ S VGA +A S S + + +
Sbjct: 356 GTGLLSANRHSLMVGAHREDGVALRGSHSLLPNQVPVPQLPVQSATSPDLNPPQDPYRGM 415
Query: 381 ------ANSSKKRKELTIDTKTESICSDQMNSVTSPTNSTSNKGSKRSRRYCSSADEDSE 434
+ S E+ D + + D +S + +R S+ D++
Sbjct: 416 PPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITRSRSSNNDDEDL 475
Query: 435 DPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEV 494
P+ KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL IL+ AV V
Sbjct: 476 TPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAV 535
Query: 495 IMSLEQQVRERNLNPKAACLRRREEEKAEDS------VGPKLGHHLSAVSQHMG 542
I+SLEQQVRERNLNPKAACL+RREEEK GP G + + HMG
Sbjct: 536 ILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPG--MGDTANHMG 587
>sp|Q01978|TFE2_XENLA Transcription factor E2-alpha OS=Xenopus laevis GN=tcf3 PE=1 SV=1
Length = 658
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 234/479 (48%), Gaps = 89/479 (18%)
Query: 95 PSSIYTDPYYINNTGGGPGDPWAGGGPIQSPSPYADYSSPPEHAISTSNHLSQNLYPPST 154
P+S+Y +Y+ + G D WA G I + +S T+ S+
Sbjct: 209 PNSVYPGAFYMAD-GLHSSDIWASSGGIGQGGYSSVLNSSQSSVSQTTGF--------SS 259
Query: 155 LHLPPENMGYMSPSG--GPADSSNISSITA-----SPLPPMST----IRNPAAASGVQSP 203
LH P E MG+ SG P+ +S+ SS A S PP+ST I N A+G
Sbjct: 260 LH-PHERMGFPMHSGEVNPSVTSSFSSTPAQYGVSSHTPPISTGDTIIGNRGTATGSS-- 316
Query: 204 SLYPGHNSPIVQTTGPGPGDTVGKALASIYPADQSASSYSSNPSTPVSSPPPLSAQNSEW 263
GD +GKALASIY D S++++SS PSTPV SP ++ + +W
Sbjct: 317 ------------------GDALGKALASIYSPDHSSTNFSSTPSTPVGSPQGITG-SGQW 357
Query: 264 --VSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHAD 321
+GP A SP + L + + RLDEAI LRSH G L + I +
Sbjct: 358 PRANGPGALSPSYDGTLHTLQNKM--EDRLDEAIHVLRSHAVGQTGALPGGHDDIHSLLS 415
Query: 322 GQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGA---------IPA--GYLAGLASSSD 370
++ G P+ SL + NSH + A +PA G L L D
Sbjct: 416 ATASVLGSGFPAAVLSLANRHSMLNSHTEEALPSASNMLHSQVTVPAQPGSLPDLTRPQD 475
Query: 371 TDGHI----------KIENIANSSKKRKELTIDTKTESICSDQMNSVTSPTNSTSNKGSK 420
+ + ++ +I SK+ +E ++ + SD + P +
Sbjct: 476 SYSGLPGLGRAIPPGRVPDIKRESKEDEE----NRSVADLSDDEKKESKP---------Q 522
Query: 421 RSRRYCSSADEDSED--------PQTKAMREKERRQANNVRERIRIRDINEALKELGRMC 472
RSR CS +D ++ P+ KA REKERR ANN RER+R++DINEA KELGRMC
Sbjct: 523 RSRTRCSINSQDEDEDEDDDNLPPEQKAEREKERRVANNARERLRVKDINEAFKELGRMC 582
Query: 473 MAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPKLG 531
HL ++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK V P++G
Sbjct: 583 QLHLNSEKPQTKLLILHQAVSVILSLEQQVRERNLNPKAACLKRREEEKVS-GVDPQMG 640
>sp|P15881|ITF2_CANFA Transcription factor 4 OS=Canis familiaris GN=TCF4 PE=2 SV=2
Length = 642
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 203/420 (48%), Gaps = 73/420 (17%)
Query: 175 SNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNS-PIVQTTGPGP------GDTVGK 227
S+ S+ S LPPMST S P + + I+ G G GD +GK
Sbjct: 242 SHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGK 301
Query: 228 ALASIYPADQSASSYSSNPSTPVSSPPPLSAQNSEWV--SGPHASSPHFTSDHRGLHMSI 285
ALASIY D + +S+SSNPSTPV SPP LSA + W G +SSP++
Sbjct: 302 ALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNY----------- 350
Query: 286 PEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHA--------DGQLNLPGLSHPSPGGS 337
+ + L+S E E LDDAI+V+RNHA G ++ G+ PS G+
Sbjct: 351 ------EGPLHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDMHGIIGPSHNGA 404
Query: 338 LLYHQHL-------GNSHAVSSTVGAIPAGYLAGLASSSDTDGHIKIENIANSSKKRKEL 390
+ N H++ VGA +A S S + + + S +L
Sbjct: 405 MGGLGSGYGTGLLSANRHSL--MVGAHREDGVALRGSHSLVPNQVPVPQLPVQSATSPDL 462
Query: 391 T----------------------IDTKTESICSDQMNSVTSPTNSTSNKGSKRSRRYCSS 428
+ K++ + + S + + K + S+
Sbjct: 463 NPPQDPYRGMPPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITSN 522
Query: 429 ADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGIL 488
D++ P+ KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL IL
Sbjct: 523 NDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLIL 582
Query: 489 NMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDS------VGPKLGHHLSAVSQHMG 542
+ AV VI+SLEQQVRERNLNPKAACL+RREEEK GP G + S HMG
Sbjct: 583 HQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPG--MGDASNHMG 640
>sp|P15884|ITF2_HUMAN Transcription factor 4 OS=Homo sapiens GN=TCF4 PE=1 SV=3
Length = 667
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 151/412 (36%), Positives = 198/412 (48%), Gaps = 73/412 (17%)
Query: 183 SPLPPMSTIRNPAAASGVQSPSLYPGHNS-PIVQTTGPGP------GDTVGKALASIYPA 235
S LPPMST S P + + I+ G G GD +GKALASIY
Sbjct: 275 SSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSP 334
Query: 236 DQSASSYSSNPSTPVSSPPPLSAQNSEWV--SGPHASSPHFTSDHRGLHMSIPEQQRLDE 293
D + +S+SSNPSTPV SPP LSA + W G +SSP++ +
Sbjct: 335 DHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNY-----------------EG 377
Query: 294 AIGYLRSHTEGMEECLDDAINVIRNHA--------DGQLNLPGLSHPSPGGSLLYHQHL- 344
+ L+S E E LDDAI+V+RNHA G ++ G+ PS G++
Sbjct: 378 PLHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDMHGIIGPSHNGAMGGLGSGY 437
Query: 345 ------GNSHAVSSTVGAIPAGYLAGLASSSDTDGHIKIENIANSSKKRKELT------- 391
N H++ VG +A S S + + + S +L
Sbjct: 438 GTGLLSANRHSL--MVGTHREDGVALRGSHSLLPNQVPVPQLPVQSATSPDLNPPQDPYR 495
Query: 392 ---------------IDTKTESICSDQMNSVTSPTNSTSNKGSKRSRRYCSSADEDSEDP 436
+ K++ + + S + + K + S+ D++ P
Sbjct: 496 GMPPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITSNNDDEDLTP 555
Query: 437 QTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIM 496
+ KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL IL+ AV VI+
Sbjct: 556 EQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVIL 615
Query: 497 SLEQQVRERNLNPKAACLRRREEEKAEDS------VGPKLGHHLSAVSQHMG 542
SLEQQVRERNLNPKAACL+RREEEK GP G + S HMG
Sbjct: 616 SLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPG--MGDASNHMG 665
>sp|P98180|TFE2_MESAU Transcription factor E2-alpha OS=Mesocricetus auratus GN=TCF3 PE=3
SV=1
Length = 649
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 154/385 (40%), Positives = 196/385 (50%), Gaps = 65/385 (16%)
Query: 194 PAAASGVQSPSLY---PGHNSPIVQ---------TTGPGPGDTVGKALASIYPADQSASS 241
PA +S +P Y GH P+ TT GD +GKALASIY D S+++
Sbjct: 285 PAVSSFSAAPGTYGGASGHTPPVSGADSLMGTRGTTASSSGDALGKALASIYSPDHSSNN 344
Query: 242 YSSNPSTPVSSPPPLSAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLR 299
+S +PSTPV SP L S+W P A SP + GLH + RLDEAI LR
Sbjct: 345 FSPSPSTPVGSPQGLPG-TSQWPRAGAPSALSPTYDG---GLHGLSKMEDRLDEAIHVLR 400
Query: 300 SHTEGMEECLDDAINVIRNHADGQLNLPG-------------LSHPSPG---GSLLYHQH 343
SH G D ++ H + PG HP G G+ L H H
Sbjct: 401 SHAVG---TASDLHGLLPGHGALTTSFPGPVPLGGRHAGLVGGGHPEDGLTSGTSLLHTH 457
Query: 344 LGNSHAVSST--VGAIPAGYLAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICS 401
SS + P GL + A +S+ ++E D ++ S+
Sbjct: 458 ASLPSQASSLPDLSQRPPDSYGGLG---------RAGAPAGASEIKREEKDDEESTSVA- 507
Query: 402 DQMNSVTSPTNSTSNKGSKRSRRYCSSADEDSED---PQTKAMREKERRQANNVRERIRI 458
++ +K ++ R +S DED +D P+ KA REKERR ANN RER+R+
Sbjct: 508 ----------DAEEDKKDLKAPRTRTSPDEDEDDLLPPEQKAEREKERRVANNARERLRV 557
Query: 459 RDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRRE 518
RDINEA KELGRMC HL ++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RRE
Sbjct: 558 RDINEAFKELGRMCQLHLSSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRRE 617
Query: 519 EEKAEDSVG-PKLGHHLSAVSQHMG 542
EEK VG P+L LSA +G
Sbjct: 618 EEKVSGVVGDPQLA--LSAAHPGLG 640
>sp|P15923|TFE2_HUMAN Transcription factor E2-alpha OS=Homo sapiens GN=TCF3 PE=1 SV=1
Length = 654
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 182/330 (55%), Gaps = 39/330 (11%)
Query: 216 TTGPGPGDTVGKALASIYPADQSASSYSSNPSTPVSSPPPLSAQNSEW--VSGPHASSPH 273
TT GD +GKALASIY D S++++SS+PSTPV SP L A S+W P A SP
Sbjct: 323 TTAGSSGDALGKALASIYSPDHSSNNFSSSPSTPVGSPQGL-AGTSQWPRAGAPGALSPS 381
Query: 274 FTSDHRGLHMSIPEQQRLDEAIGYLRSH---TEGMEECLDDAINVIRNHADGQLNLPGL- 329
+ GL I + LDEAI LRSH T G L + + G ++L G
Sbjct: 382 YDGGLHGLQSKI--EDHLDEAIHVLRSHAVGTAGDMHTLLPGHGALASGFTGPMSLGGRH 439
Query: 330 ------SHPSPGGSLLYHQHLGNSHAVSSTVGAIPA--GYLAGLASSSDT-DGHIKIENI 380
SHP G L S ++ A+P+ G L L+ D+ G +
Sbjct: 440 AGLVGGSHPEDG--------LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSGLGRAGAT 491
Query: 381 ANSSKKRKELTIDTKTESICSDQMNSVTSPTNSTSNKGSKRSRRYCSSADEDSED---PQ 437
A +S+ ++E D + S +S K ++ R +S DED +D P+
Sbjct: 492 AAASEIKREEKEDEENTSAAD----------HSEEEKKELKAPRARTSPDEDEDDLLPPE 541
Query: 438 TKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMS 497
KA REKERR ANN RER+R+RDINEA KELGRMC HL ++KPQTKL IL+ AV VI++
Sbjct: 542 QKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQTKLLILHQAVSVILN 601
Query: 498 LEQQVRERNLNPKAACLRRREEEKAEDSVG 527
LEQQVRERNLNPKAACL+RREEEK VG
Sbjct: 602 LEQQVRERNLNPKAACLKRREEEKVSGVVG 631
>sp|Q91605|HTF4_XENLA Transcription factor XE1.1 (Fragment) OS=Xenopus laevis PE=2 SV=1
Length = 152
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 93/123 (75%), Gaps = 5/123 (4%)
Query: 401 SDQMNSVTSPTNSTSNKGSKRSRRYCSSADEDSE-DPQTKAMREKERRQANNVRERIRIR 459
SD M S + +S K K SR SS +ED + +P+ K REKERR ANN RER+R+R
Sbjct: 6 SDDMKS----DDESSQKEMKSSRGRTSSINEDEDLNPEQKVEREKERRMANNARERLRVR 61
Query: 460 DINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREE 519
DINEA KELGRMC HLK++KPQTKL IL+ AV VI++LEQQVRERNLNPKAACL+RREE
Sbjct: 62 DINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILNLEQQVRERNLNPKAACLKRREE 121
Query: 520 EKA 522
EK
Sbjct: 122 EKV 124
>sp|Q28772|HTF4_PAPHA Transcription factor 12 (Fragment) OS=Papio hamadryas GN=TCF12 PE=2
SV=1
Length = 160
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 93/123 (75%), Gaps = 5/123 (4%)
Query: 401 SDQMNSVTSPTNSTSNKGSKRSRRYCSSADEDSE-DPQTKAMREKERRQANNVRERIRIR 459
SD M S + +S K K S R +S +ED + +P+ K REKERR ANN RER+R+R
Sbjct: 14 SDDMKS----DDESSQKDIKVSSRGRTSTNEDEDLNPEQKIEREKERRMANNARERLRVR 69
Query: 460 DINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREE 519
DINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREE
Sbjct: 70 DINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREE 129
Query: 520 EKA 522
EK
Sbjct: 130 EKV 132
>sp|Q90683|ITF2_CHICK Transcription factor 4 (Fragment) OS=Gallus gallus GN=TCF4 PE=3
SV=1
Length = 85
Score = 143 bits (360), Expect = 4e-33, Method: Composition-based stats.
Identities = 67/83 (80%), Positives = 73/83 (87%)
Query: 439 KAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSL 498
KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL IL+ AV VI+SL
Sbjct: 1 KAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSL 60
Query: 499 EQQVRERNLNPKAACLRRREEEK 521
EQQVRERNLNPKAACL+RREEEK
Sbjct: 61 EQQVRERNLNPKAACLKRREEEK 83
>sp|Q60722|ITF2_MOUSE Transcription factor 4 OS=Mus musculus GN=Tcf4 PE=1 SV=1
Length = 670
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 94/195 (48%), Gaps = 34/195 (17%)
Query: 183 SPLPPMSTIRNPAAASGVQSPSLYPGHNS-PIVQTTGPGP------GDTVGKALASIYPA 235
S LPPMST S P + + I+ G G GD +GKALASIY
Sbjct: 274 SSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGTGAAGSSQTGDALGKALASIYSP 333
Query: 236 DQSASSYSSNPSTPVSSPPPLSAQNSEWV--SGPHASSPHFTSDHRGLHMSIPEQQRLDE 293
D + +S+SSNPSTPV SPP LSA + W G +SSP++ +
Sbjct: 334 DHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNY-----------------EG 376
Query: 294 AIGYLRSHTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSST 353
+ L+S E E LDDAI+V+RNHA G S PGG H +G SH +
Sbjct: 377 PLHSLQSRIEDRLERLDDAIHVLRNHAVGP------STAVPGGHGDMHGIMGPSH--NGA 428
Query: 354 VGAIPAGYLAGLASS 368
+G++ +GY L S+
Sbjct: 429 MGSLGSGYGTSLLSA 443
>sp|Q7RTU4|BHA09_HUMAN Class A basic helix-loop-helix protein 9 OS=Homo sapiens GN=BHLHA9
PE=3 SV=2
Length = 235
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 429 ADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGIL 488
A+E + + + +R K RR A NVRER RI D NEA L R + H K +K+ L
Sbjct: 49 AEEPAGRRRARPVRSKARRMAANVRERKRILDYNEAFNAL-RRALRHDLGGKRLSKIATL 107
Query: 489 NMAVEVIMSLEQQVR 503
A+ I +L +R
Sbjct: 108 RRAIHRIAALSLVLR 122
>sp|Q5RJB0|BHA09_MOUSE Class A basic helix-loop-helix protein 9 OS=Mus musculus GN=Bhlha9
PE=2 SV=1
Length = 231
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 429 ADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGIL 488
A+E + + + R K RR A NVRER RI D NEA L R + H K +K+ L
Sbjct: 45 AEEAAGRKRERPTRSKARRMAANVRERKRILDYNEAFNAL-RRALQHDLGGKRLSKIATL 103
Query: 489 NMAVEVIMSLEQQVR 503
A+ I +L +R
Sbjct: 104 RRAIHRITALSLVLR 118
>sp|P22816|MYOD_DROME Myogenic-determination protein OS=Drosophila melanogaster GN=nau
PE=2 SV=3
Length = 332
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 439 KAMREK----ERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEV 494
KA ++K +RR+A +RER R+R +NEA + L R ++ P K+ IL A+E
Sbjct: 151 KACKKKSVTVDRRKAATMRERRRLRKVNEAFEILKRRTSSNPNQRLP--KVEILRNAIEY 208
Query: 495 IMSLEQQVRE 504
I SLE ++E
Sbjct: 209 IESLEDLLQE 218
>sp|Q9W6C8|NDF2_DANRE Neurogenic differentiation factor 2 OS=Danio rerio GN=neurod2 PE=2
SV=1
Length = 363
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 442 REKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQ 501
R K RRQ N RER R+ D+N AL L ++ + KT K +K+ L +A I +L +
Sbjct: 104 RSKVRRQKANARERTRMHDLNSALDNLLKVVPCYSKTQK-LSKIETLRLAKNYIWALSEI 162
Query: 502 VR 503
+R
Sbjct: 163 LR 164
>sp|O16867|TAP_DROME Basic helix-loop-helix neural transcription factor TAP
OS=Drosophila melanogaster GN=tap PE=2 SV=2
Length = 398
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 17/158 (10%)
Query: 356 AIPAGYLAG----LASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMNSV---- 407
AIP Y G + SS G + + + +++ R T+ E + S N V
Sbjct: 55 AIPQPYSGGTWDAVPLSSPPAGFVGLLDTSSNHSTRSGRTL---VEHLNSRATNGVFDPP 111
Query: 408 --TSPTNSTSNKGSKR-SRRYCSSADE--DSEDPQTKAMREKERRQANNVRERIRIRDIN 462
++P S + + R R+Y + S P ++ RR N RER R+ ++N
Sbjct: 112 LTSTPVKSPEDPNAPRPKRKYAVGKNRVTRSRSPTQVVKIKRFRRMKANDRERNRMHNLN 171
Query: 463 EALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQ 500
+AL++L R+ + L + TK+ IL A I +LEQ
Sbjct: 172 DALEKL-RVTLPSLPEETKLTKIEILRFAHNYIFALEQ 208
>sp|B6VQA1|DIMM_DROME Protein dimmed OS=Drosophila melanogaster GN=dimm PE=1 SV=1
Length = 390
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 440 AMREKER---RQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIM 496
A+ KER R +N RER+R+ +N+A + L R + H++ ++ +K+ L +A I+
Sbjct: 148 ALNAKERNMRRLESNERERMRMHSLNDAFQSL-REVIPHVEMERRLSKIETLTLAKNYII 206
Query: 497 SLEQQVRERNLNPKAACL 514
+L + + N +AA L
Sbjct: 207 NLTHIILSKR-NEEAAAL 223
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 32.7 bits (73), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 384 SKKRKELTIDTKT-ESICSDQMNSVTSP------TNSTSNKGSKRSRRYCSSADEDSEDP 436
+KKRK L T E+ SDQ S +S ST N S+R +R + +E +
Sbjct: 85 TKKRKSLMEAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSRRGKRSKNREEEKEREV 144
Query: 437 QTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVI- 495
R + ++++ ER+R INE LK L + KT +G+ M E+I
Sbjct: 145 VHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKT------MGMATMLDEIIN 198
Query: 496 --MSLEQQVRERNLNPKAA 512
SL+ QV ++ AA
Sbjct: 199 YVQSLQNQVEFLSMKLTAA 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.127 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,198,285
Number of Sequences: 539616
Number of extensions: 11593448
Number of successful extensions: 38011
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 983
Number of HSP's that attempted gapping in prelim test: 35391
Number of HSP's gapped (non-prelim): 2933
length of query: 566
length of database: 191,569,459
effective HSP length: 123
effective length of query: 443
effective length of database: 125,196,691
effective search space: 55462134113
effective search space used: 55462134113
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)