Your job contains 1 sequence.
>psy15318
MVFDACLKYNGAADMDNGMSYSNSYANNNTDSFSPDSPYFPFIMPPGRTVPPASIKRKRE
SIEPPENSDVDGAHGWYDEFGQASSPRFVSHKPNPSSIYTDPYYINNTGGGPGDPWAGGG
PIQSPSPYADYSSPPEHAISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSI
TASPLPPMSTIRNPAAASGVQSPSLYPGHNSPIVQTTGPGPGDTVGKALASIYPADQSAS
SYSSNPSTPVSSPPPLSAQNSEWVSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRS
HTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAG
YLAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMNSVTSPTNSTSNKGSK
RSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDK
PQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPKLGHHLSAVSQH
MGIQPPSFPSMAPNAQGLMPQHDGPQ
The BLAST search returned 16 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15318
(566 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0000413 - symbol:da "daughterless" species:7227 "D... 515 1.5e-59 3
UNIPROTKB|J9PAE9 - symbol:TCF4 "Transcription factor 4" s... 366 1.5e-51 3
UNIPROTKB|F1MXB9 - symbol:TCF4 "Uncharacterized protein" ... 370 1.7e-51 3
MGI|MGI:98510 - symbol:Tcf3 "transcription factor 3" spec... 471 2.4e-50 3
UNIPROTKB|P15923 - symbol:TCF3 "Transcription factor E2-a... 462 4.0e-50 3
UNIPROTKB|P30985 - symbol:TCF12 "Transcription factor 12"... 374 4.8e-50 2
RGD|620914 - symbol:Tcf3 "transcription factor 3" species... 461 8.1e-50 3
UNIPROTKB|F1LRL7 - symbol:Tcf3 "Transcription factor E2-a... 461 1.0e-49 3
UNIPROTKB|P98180 - symbol:TCF3 "Transcription factor E2-a... 455 1.7e-49 3
UNIPROTKB|F1NVE3 - symbol:F1NVE3 "Uncharacterized protein... 361 2.5e-49 3
UNIPROTKB|F1NWV2 - symbol:F1NWV2 "Uncharacterized protein... 361 1.8e-48 2
UNIPROTKB|A6QPK5 - symbol:TCF7L2 "Uncharacterized protein... 370 3.8e-48 3
UNIPROTKB|F1S1Z1 - symbol:TCF4 "Uncharacterized protein" ... 366 4.8e-48 3
UNIPROTKB|K7GQG7 - symbol:TCF4 "Uncharacterized protein" ... 370 9.5e-48 3
UNIPROTKB|B7Z5M6 - symbol:TCF4 "cDNA FLJ58684, highly sim... 370 2.0e-47 3
UNIPROTKB|F1NIE9 - symbol:F1NIE9 "Uncharacterized protein... 373 2.5e-47 3
ZFIN|ZDB-GENE-090814-1 - symbol:tcf4 "transcription facto... 464 5.3e-47 2
UNIPROTKB|H3BTP3 - symbol:TCF4 "Transcription factor 4" s... 370 7.3e-47 3
UNIPROTKB|F1PDB2 - symbol:TCF4 "Transcription factor 4" s... 366 9.8e-47 3
UNIPROTKB|P15881 - symbol:TCF4 "Transcription factor 4" s... 366 1.3e-46 3
UNIPROTKB|E9PH57 - symbol:TCF4 "Transcription factor 4" s... 370 1.3e-46 3
UNIPROTKB|F6Y2I2 - symbol:TCF12 "Uncharacterized protein"... 486 2.3e-46 1
UNIPROTKB|H3BPJ7 - symbol:TCF4 "Transcription factor 4" s... 366 2.6e-46 3
UNIPROTKB|B7Z6Y1 - symbol:TCF4 "cDNA FLJ58695, highly sim... 366 2.7e-46 3
UNIPROTKB|F1MV33 - symbol:TCF12 "Uncharacterized protein"... 485 3.0e-46 1
UNIPROTKB|P15884 - symbol:TCF4 "Transcription factor 4" s... 366 4.2e-46 3
UNIPROTKB|Q2TB39 - symbol:TCF3 "Transcription factor E2-a... 373 9.9e-46 3
MGI|MGI:98506 - symbol:Tcf4 "transcription factor 4" spec... 367 1.1e-45 3
UNIPROTKB|E9PTG9 - symbol:Tcf3 "Transcription factor E2-a... 428 2.1e-45 3
UNIPROTKB|Q01978 - symbol:tcf3 "Transcription factor E2-a... 476 2.7e-45 1
ZFIN|ZDB-GENE-040516-11 - symbol:tcf12 "transcription fac... 380 4.2e-45 3
UNIPROTKB|G0LNU5 - symbol:TCF4 "Transcription factor 4, i... 366 5.6e-45 3
UNIPROTKB|F1MVI6 - symbol:TCF3 "Uncharacterized protein" ... 441 8.0e-45 2
RGD|69271 - symbol:Tcf4 "transcription factor 4" species:... 367 1.4e-44 2
UNIPROTKB|F1SDI1 - symbol:TCF3 "Uncharacterized protein" ... 359 1.8e-43 5
ZFIN|ZDB-GENE-990415-51 - symbol:tcf3 "transcription fact... 443 8.4e-42 1
UNIPROTKB|E2R6H8 - symbol:TCF3 "Uncharacterized protein" ... 413 3.4e-41 2
UNIPROTKB|F1M2Q2 - symbol:Tcf12 "Transcription factor 12"... 402 2.8e-40 2
ZFIN|ZDB-GENE-051113-64 - symbol:zgc:113045 "zgc:113045" ... 355 6.4e-40 2
UNIPROTKB|F5GY10 - symbol:TCF12 "Transcription factor 12"... 392 7.4e-40 2
UNIPROTKB|E9PT88 - symbol:Tcf12 "Transcription factor 12"... 391 9.4e-40 2
UNIPROTKB|F1NKB8 - symbol:TCF3 "Uncharacterized protein" ... 423 3.0e-39 1
UNIPROTKB|F1NKB5 - symbol:TCF3 "Uncharacterized protein" ... 355 5.3e-39 3
UNIPROTKB|F1LNC2 - symbol:Tcf12 "Transcription factor 12"... 391 8.4e-39 2
UNIPROTKB|Q99081 - symbol:TCF12 "Transcription factor 12"... 392 9.0e-39 2
UNIPROTKB|E9PGY0 - symbol:TCF12 "Transcription factor 12"... 392 1.2e-38 2
RGD|3829 - symbol:Tcf12 "transcription factor 12" species... 391 1.6e-38 2
UNIPROTKB|F1NBS5 - symbol:TCF3 "Uncharacterized protein" ... 413 4.0e-38 1
UNIPROTKB|E2QW03 - symbol:TCF12 "Uncharacterized protein"... 387 4.2e-38 2
MGI|MGI:101877 - symbol:Tcf12 "transcription factor 12" s... 385 7.3e-38 2
UNIPROTKB|F1NEE1 - symbol:TCF3 "Uncharacterized protein" ... 409 1.1e-37 1
UNIPROTKB|Q60420 - symbol:TCF12 "Transcription factor 12"... 401 2.4e-37 1
UNIPROTKB|F1NKC0 - symbol:TCF3 "Uncharacterized protein" ... 401 2.4e-37 1
UNIPROTKB|H0YNP8 - symbol:TCF12 "Transcription factor 12"... 394 1.3e-36 1
UNIPROTKB|B4E1W1 - symbol:TCF12 "Transcription factor 12"... 392 2.1e-36 1
UNIPROTKB|B4DZP2 - symbol:TCF12 "cDNA FLJ51686, highly si... 392 2.1e-36 1
UNIPROTKB|K7EKB9 - symbol:TCF3 "Transcription factor E2-a... 369 5.8e-34 1
UNIPROTKB|K7EPS2 - symbol:TCF3 "Transcription factor E2-a... 369 5.8e-34 1
UNIPROTKB|K7ERZ7 - symbol:TCF3 "Transcription factor E2-a... 369 5.8e-34 1
UNIPROTKB|Q91605 - symbol:Q91605 "Transcription factor XE... 366 1.2e-33 1
UNIPROTKB|Q28772 - symbol:TCF12 "Transcription factor 12"... 362 3.2e-33 1
UNIPROTKB|F1NVL4 - symbol:TCF3 "Uncharacterized protein" ... 367 1.3e-32 2
UNIPROTKB|B4DGI9 - symbol:TCF12 "cDNA FLJ52589, highly si... 359 1.7e-32 2
UNIPROTKB|K7EMM4 - symbol:TCF3 "Transcription factor E2-a... 338 1.7e-30 1
UNIPROTKB|F1NMZ7 - symbol:F1NMZ7 "Uncharacterized protein... 337 2.2e-30 1
UNIPROTKB|Q90683 - symbol:TCF4 "Transcription factor 4" s... 336 2.9e-30 1
UNIPROTKB|Q788W0 - symbol:G12 "G12 protein" species:9031 ... 330 1.4e-29 1
UNIPROTKB|K7GS27 - symbol:TCF4 "Uncharacterized protein" ... 217 8.2e-24 3
WB|WBGene00001949 - symbol:hlh-2 species:6239 "Caenorhabd... 237 1.8e-19 2
UNIPROTKB|F1LUX9 - symbol:F1LUX9 "Uncharacterized protein... 237 4.6e-17 1
ZFIN|ZDB-GENE-000926-1 - symbol:atoh7 "atonal homolog 7" ... 107 3.7e-05 1
>FB|FBgn0000413 [details] [associations]
symbol:da "daughterless" species:7227 "Drosophila
melanogaster" [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0007399 "nervous system development"
evidence=NAS;TAS] [GO:0007530 "sex determination" evidence=NAS;TAS]
[GO:0003677 "DNA binding" evidence=TAS] [GO:0005634 "nucleus"
evidence=ISS;NAS;IDA] [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IPI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0061382 "Malpighian tubule tip cell
differentiation" evidence=IMP] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA;IPI] [GO:0007422 "peripheral nervous
system development" evidence=NAS;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0007541 "sex
determination, primary response to X:A ratio" evidence=TAS]
[GO:0001012 "RNA polymerase II regulatory region DNA binding"
evidence=IPI] [GO:0030707 "ovarian follicle cell development"
evidence=TAS] [GO:0016330 "second mitotic wave involved in compound
eye morphogenesis" evidence=TAS] [GO:0045464 "R8 cell fate
specification" evidence=NAS] [GO:0048477 "oogenesis"
evidence=IMP;TAS] [GO:0008134 "transcription factor binding"
evidence=IGI] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IPI]
[GO:0008407 "chaeta morphogenesis" evidence=IMP] [GO:0007423
"sensory organ development" evidence=IGI;IMP] [GO:0006974 "response
to DNA damage stimulus" evidence=IMP] [GO:0035019 "somatic stem
cell maintenance" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] [GO:0061101 "neuroendocrine cell differentiation"
evidence=IMP] [GO:0048663 "neuron fate commitment" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:AE014134 GO:GO:0030707 GO:GO:0045464 GO:GO:0043565
GO:GO:0007422 GO:GO:0006974 GO:GO:0005667 GO:GO:0001077
GO:GO:0035019 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
ChiTaRS:Arr1 GO:GO:0061382 GO:GO:0008407 GO:GO:0016330
GO:GO:0061101 EMBL:J03148 EMBL:Y00221 PIR:S06891 RefSeq:NP_477189.1
UniGene:Dm.388 ProteinModelPortal:P11420 SMR:P11420 DIP:DIP-50N
IntAct:P11420 MINT:MINT-862512 STRING:P11420 PaxDb:P11420
PRIDE:P11420 EnsemblMetazoa:FBtr0080008 EnsemblMetazoa:FBtr0332195
EnsemblMetazoa:FBtr0332196 GeneID:34413 KEGG:dme:Dmel_CG5102
UCSC:CG5102-RA CTD:13130 FlyBase:FBgn0000413 eggNOG:NOG282899
GeneTree:ENSGT00510000046438 InParanoid:P11420 KO:K15603
OMA:RNHCEPE OrthoDB:EOG4KSN1H PhylomeDB:P11420 GenomeRNAi:34413
NextBio:788379 Bgee:P11420 GermOnline:CG5102 GO:GO:0007541
Uniprot:P11420
Length = 710
Score = 515 (186.3 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 110/147 (74%), Positives = 120/147 (81%)
Query: 417 KGSKRSRRYCSSADEDSE-DPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAH 475
KG+KR RRYCSSADED + +P KA+REKERRQANN RERIRIRDINEALKELGRMCM H
Sbjct: 525 KGTKRPRRYCSSADEDDDAEPAVKAIREKERRQANNARERIRIRDINEALKELGRMCMTH 584
Query: 476 LKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPKLG--HH 533
LK+DKPQTKLGILNMAVEVIM+LEQQVRERNLNPKAACL+RREEEKAED GPKL HH
Sbjct: 585 LKSDKPQTKLGILNMAVEVIMTLEQQVRERNLNPKAACLKRREEEKAED--GPKLSAQHH 642
Query: 534 LSAVSQHMGIQPPSFPSMAPNAQGLMP 560
+ Q +G P S P AQ L+P
Sbjct: 643 MIPQPQQVGGTPGSSYHSQP-AQ-LVP 667
Score = 76 (31.8 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 305 MEECLDDAINVIRNHADGQL------NLPGLSHPSPGGSLLYHQ--HLG---NSHAVSST 353
MEE LDDA+NV+RNH + ++ +L + + S + + HLG NS +VS+T
Sbjct: 367 MEERLDDALNVLRNHCEPEMLAGVNQSLASIDNIDALTSFVPNSPSHLGSGGNSGSVSNT 426
Query: 354 VGA-IPAGYLA-GLASSSDTDG 373
A + LA G A+++ T G
Sbjct: 427 SNAALVHEVLALGAAAAAGTSG 448
Score = 49 (22.3 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 160 ENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSPIVQTTGP 219
+ +G GG + + + LPP+S+ R P + G+ P G +P+ P
Sbjct: 133 DGLGMGGGGGGGVGADGMHCPVTTGLPPISSFR-PTSG-GIGGPGA--GQQAPVNVNVNP 188
>UNIPROTKB|J9PAE9 [details] [associations]
symbol:TCF4 "Transcription factor 4" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00510000046438 EMBL:AAEX03000135 EMBL:AAEX03000136
EMBL:AAEX03000137 EMBL:AAEX03000138 EMBL:AAEX03000139
EMBL:AAEX03000140 Ensembl:ENSCAFT00000048913 Uniprot:J9PAE9
Length = 501
Score = 366 (133.9 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 78/121 (64%), Positives = 89/121 (73%)
Query: 428 SADEDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKL 485
+++ D ED P+ KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL
Sbjct: 379 TSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKL 438
Query: 486 GILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH--LSAVSQHM 541
IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H + S HM
Sbjct: 439 LILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHM 498
Query: 542 G 542
G
Sbjct: 499 G 499
Score = 153 (58.9 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 70/229 (30%), Positives = 103/229 (44%)
Query: 153 STLHLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHN 210
S+ H+P ++ Y S P + S+ S+ S LPPMST R+ + + S P N
Sbjct: 79 SSSHIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFRS--GTNHYSTSSCTPPAN 135
Query: 211 SP--IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSE 262
I+ G G GD +GKALASIY D A +
Sbjct: 136 GTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAV 195
Query: 263 WV-SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHA 320
W +G ASS + ++ G LH S+ Q R+++ + E LDDAI+V+RNHA
Sbjct: 196 WSRNGGQASS---SPNYEGPLH-SL--QSRIEDRL-----------ERLDDAIHVLRNHA 238
Query: 321 DGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSS 369
G P + P G + H +G SH + +G + +GY GL S++
Sbjct: 239 VG----PSTAMPGGHGDM--HGIIGPSH--NGAMGGLGSGYGTGLLSAN 279
Score = 49 (22.3 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDE 79
S+ YA + +T ++ DSP +P P T P + + S +P +S G+
Sbjct: 17 SSVYAPSASTADYNRDSPGYPSSKPAASTFPSSFFMQDGHHSSDPWSSSSGMNQPGYGGM 76
Query: 80 FGQAS 84
G +S
Sbjct: 77 LGSSS 81
>UNIPROTKB|F1MXB9 [details] [associations]
symbol:TCF4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00510000046438
EMBL:DAAA02057094 EMBL:DAAA02057095 EMBL:DAAA02057096
EMBL:DAAA02057097 EMBL:DAAA02057098 EMBL:DAAA02057099
EMBL:DAAA02057100 EMBL:DAAA02057101 UniGene:Bt.72435
UniGene:Bt.91190 IPI:IPI00717548 Ensembl:ENSBTAT00000031006
ArrayExpress:F1MXB9 Uniprot:F1MXB9
Length = 511
Score = 370 (135.3 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 81/130 (62%), Positives = 92/130 (70%)
Query: 417 KGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHL 476
K RSR S+ D++ P+ KA REKERR ANN RER+R+RDINEA KELGRM HL
Sbjct: 382 KSITRSRS--SNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHL 439
Query: 477 KTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH- 533
K+DKPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H
Sbjct: 440 KSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHP 499
Query: 534 -LSAVSQHMG 542
+ S HMG
Sbjct: 500 GMGDASNHMG 509
Score = 154 (59.3 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 73/229 (31%), Positives = 103/229 (44%)
Query: 156 HLPPENMGYMS--PS---GGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHN 210
H+P ++ Y S P G P+ SS + I +S LPPMST + + S S P N
Sbjct: 87 HIP-QSSSYCSLHPHERLGYPSHSS--ADINSS-LPPMSTFHR-SGTNHYSSSSCTPPAN 141
Query: 211 SP--IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSE 262
I+ G G GD +GKALASIY D A +
Sbjct: 142 GTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAV 201
Query: 263 WV-SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHA 320
W SG ASS + ++ G LH S+ Q R+++ + E LDDAI+V+RNHA
Sbjct: 202 WSRSGGQASS---SPNYEGPLH-SL--QSRIEDRL-----------ERLDDAIHVLRNHA 244
Query: 321 DGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSS 369
G P + P G + H +G SH + +G + +GY GL S++
Sbjct: 245 VG----PSTAMPGGHGDM--HGIIGPSH--NGAMGGLASGYGTGLLSAN 285
Score = 47 (21.6 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 19/71 (26%), Positives = 30/71 (42%)
Query: 19 MSYSNS---YANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGA 73
M Y N YA + +T ++ DSP +P P T P + + S +P +S
Sbjct: 16 MYYYNGKAVYAPSASTADYNRDSPGYPSSKPAASTFPSSFFMQDGHHSSDPWSSSSGMNQ 75
Query: 74 HGWYDEFGQAS 84
G+ G +S
Sbjct: 76 PGYGGMLGNSS 86
>MGI|MGI:98510 [details] [associations]
symbol:Tcf3 "transcription factor 3" species:10090 "Mus
musculus" [GO:0000080 "G1 phase of mitotic cell cycle"
evidence=ISO] [GO:0000788 "nuclear nucleosome" evidence=IDA]
[GO:0001779 "natural killer cell differentiation" evidence=IGI]
[GO:0002326 "B cell lineage commitment" evidence=ISO] [GO:0003677
"DNA binding" evidence=ISO;IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;TAS] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO;IDA;IPI] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IGI;IDA;TAS] [GO:0006357 "regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO;IPI] [GO:0010628 "positive regulation of gene
expression" evidence=ISO;IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0030890 "positive regulation of B cell proliferation"
evidence=ISO] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=ISO] [GO:0032496 "response to
lipopolysaccharide" evidence=IMP] [GO:0033077 "T cell
differentiation in thymus" evidence=IMP] [GO:0033152
"immunoglobulin V(D)J recombination" evidence=ISO;IMP] [GO:0042493
"response to drug" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO;IDA] [GO:0043234 "protein
complex" evidence=ISO] [GO:0043425 "bHLH transcription factor
binding" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IGI;IDA] [GO:0043966 "histone H3 acetylation"
evidence=IMP] [GO:0043967 "histone H4 acetylation" evidence=IMP]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IDA] [GO:0045787 "positive regulation of cell cycle"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;IGI;IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO;IDA;IPI] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0048468 "cell development"
evidence=IGI] [GO:0048541 "Peyer's patch development" evidence=IGI]
[GO:0050821 "protein stabilization" evidence=IDA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070644 "vitamin D
response element binding" evidence=ISO] [GO:0070888 "E-box binding"
evidence=ISO;IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 MGI:MGI:98510 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0043234 GO:GO:0042803 GO:GO:0050821
GO:GO:0051091 GO:GO:0042493 GO:GO:0003677 GO:GO:0043565
GO:GO:0032496 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 Reactome:REACT_127416 GO:GO:0003713
GO:GO:0030890 GO:GO:0043967 GO:GO:0033077 GO:GO:0046982
GO:GO:0045666 GO:GO:0048541 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0008134 GO:GO:0048468 GO:GO:0070888 GO:GO:0045787
GO:GO:0000080 GO:GO:0002326 GO:GO:0043966 GO:GO:0000788
eggNOG:NOG282899 GeneTree:ENSGT00510000046438 GO:GO:0033152
HOVERGEN:HBG003854 GO:GO:0001779 CleanEx:MM_ME2 PDB:2QL2
PDBsum:2QL2 CleanEx:MM_TCF3 CTD:6929 KO:K09063 ChiTaRS:TCF3
EMBL:AF352579 EMBL:AK017617 EMBL:AK038738 EMBL:AK156265
EMBL:BC006860 EMBL:BC018260 EMBL:X17500 EMBL:D16631 EMBL:D16632
EMBL:D16633 EMBL:D16634 EMBL:D16635 EMBL:D16636 EMBL:D16637
EMBL:D16638 EMBL:D29919 IPI:IPI00122714 IPI:IPI00461050 PIR:S08410
RefSeq:NP_001157620.1 RefSeq:NP_001157621.1 RefSeq:NP_001157623.1
RefSeq:NP_035678.3 UniGene:Mm.3406 ProteinModelPortal:P15806
SMR:P15806 DIP:DIP-30940N IntAct:P15806 MINT:MINT-218641
STRING:P15806 PhosphoSite:P15806 PRIDE:P15806
Ensembl:ENSMUST00000020377 Ensembl:ENSMUST00000020379
Ensembl:ENSMUST00000105345 Ensembl:ENSMUST00000105346 GeneID:21423
KEGG:mmu:21423 UCSC:uc007gdf.2 UCSC:uc007gdg.2 OrthoDB:EOG4HX50S
EvolutionaryTrace:P15806 NextBio:300742 Bgee:P15806
CleanEx:MM_TCFE2A Genevestigator:P15806
GermOnline:ENSMUSG00000020167 Uniprot:P15806
Length = 651
Score = 471 (170.9 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 152/404 (37%), Positives = 197/404 (48%)
Query: 160 ENMGYMSPSGGPADSS--NISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSPIVQTT 217
+ MGY G + S +SS +A+P T + SG + SL G TT
Sbjct: 269 DRMGYQL-HGSEVNGSLPAVSSFSAAPGTYSGTSGHTPPVSGAAAESLL-GTRG----TT 322
Query: 218 GPGPGDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEW--VSGPHASSPHFT 275
GD +GKALASIY D S+W P A SP++
Sbjct: 323 ASSSGDALGKALASIYSPDHSSNNFSPSPSTPVGSPQGLPG-TSQWPRAGAPSALSPNYD 381
Query: 276 SDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAI---NVIRNHADGQLNLPGL--- 329
+ GLH + RLDEAI LRSH G L + + G ++L G
Sbjct: 382 A---GLHGLSKMEDRLDEAIHVLRSHAVGTASDLHGLLPGHGALTTSFTGPMSLGGRHAG 438
Query: 330 ----SHPSPG---GSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSSDTDGHIKIENIAN 382
SHP G G+ L H H ++ S ++P L+ S + G + A
Sbjct: 439 LVGGSHPEEGLTSGASLLHNHA----SLPSQPSSLPD--LSQRPPDSYS-GLGRAGTTAG 491
Query: 383 SSKKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRSRRYCSSADEDSED---PQTK 439
+S+ ++E D + S+ + K + R +S DED +D P+ K
Sbjct: 492 ASEIKREEKEDEEIASVADAE-----------EDKKDLKVPRTRTSPDEDEDDLLPPEQK 540
Query: 440 AMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLE 499
A REKERR ANN RER+R+RDINEA KELGRMC HL ++KPQTKL IL+ AV VI+SLE
Sbjct: 541 AEREKERRVANNARERLRVRDINEAFKELGRMCQLHLSSEKPQTKLLILHQAVAVILSLE 600
Query: 500 QQVRERNLNPKAACLRRREEEKAEDSVG-PKLGHHLSAVSQHMG 542
QQVRERNLNPKAACL+RREEEK VG P+L LSA +G
Sbjct: 601 QQVRERNLNPKAACLKRREEEKVSGVVGDPQLA--LSAAHPGLG 642
Score = 45 (20.9 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 20/78 (25%), Positives = 32/78 (41%)
Query: 22 SNSYANNNTDSFSPDSPYFPFIMPPGRTVPPASIKRKRESIEPP-ENSDVDGAHGWYDEF 80
S+ Y ++ DS+S D+ +P P P + S+ P E G+
Sbjct: 183 SSVYPPSSGDSYSRDAAAYPSAKTPSSAYP-SPFYVADGSLHPSAELWSTPSQVGFGPML 241
Query: 81 GQASSPRFVSHKPNPSSI 98
G SSP ++ P SS+
Sbjct: 242 GDGSSPLPLA--PGSSSV 257
Score = 44 (20.5 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 37 SPYFP-FIMPPGRTVPPASIKRKRESIE--PP--ENSDVDGAHGWYDEFGQASSPRFVSH 91
S Y+P F P R + + + + PP +S + G D + + ++ + S
Sbjct: 148 SQYYPSFPSNPRRRAADGGLDTQPKKVRKVPPGLPSSVYPPSSG--DSYSRDAAA-YPSA 204
Query: 92 KPNPSSIYTDPYYI 105
K PSS Y P+Y+
Sbjct: 205 K-TPSSAYPSPFYV 217
Score = 37 (18.1 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 10 NGAADMDNGMSYSNSYANNNTDSFSPDSPY 39
+G D + S+ +S + N+ SF P Y
Sbjct: 49 SGLEDRPSSGSWGSS--DQNSSSFDPSRTY 76
>UNIPROTKB|P15923 [details] [associations]
symbol:TCF3 "Transcription factor E2-alpha" species:9606
"Homo sapiens" [GO:0000788 "nuclear nucleosome" evidence=IEA]
[GO:0001779 "natural killer cell differentiation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0032496 "response
to lipopolysaccharide" evidence=IEA] [GO:0033077 "T cell
differentiation in thymus" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0043967 "histone H4 acetylation" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0048541 "Peyer's
patch development" evidence=IEA] [GO:0050821 "protein
stabilization" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=NAS;IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA;NAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS;IDA] [GO:0046982
"protein heterodimerization activity" evidence=IDA;NAS;IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0002326 "B cell lineage commitment"
evidence=IDA;NAS] [GO:0030183 "B cell differentiation"
evidence=NAS] [GO:0030890 "positive regulation of B cell
proliferation" evidence=IMP] [GO:0045787 "positive regulation of
cell cycle" evidence=IDA] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=IDA] [GO:0070888 "E-box binding" evidence=ISS;IDA]
[GO:0031435 "mitogen-activated protein kinase kinase kinase
binding" evidence=IPI] [GO:0070491 "repressing transcription factor
binding" evidence=IPI] [GO:0006351 "transcription, DNA-dependent"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS;IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISS]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0033152
"immunoglobulin V(D)J recombination" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0042692 "muscle cell
differentiation" evidence=TAS] [GO:0051149 "positive regulation of
muscle cell differentiation" evidence=TAS] [GO:0070644 "vitamin D
response element binding" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0005737 Pathway_Interaction_DB:p38_mk2pathway
Reactome:REACT_111045 GO:GO:0043234 GO:GO:0042803 GO:GO:0050821
GO:GO:0051091 Pathway_Interaction_DB:wnt_canonical_pathway
GO:GO:0042493 GO:GO:0003677 GO:GO:0043565 GO:GO:0032496
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 Orphanet:99860 GO:GO:0042692 GO:GO:0051149
GO:GO:0003713 GO:GO:0030890 GO:GO:0043967 GO:GO:0033077
GO:GO:0046982 GO:GO:0045666 GO:GO:0048541 Gene3D:4.10.280.10
SUPFAM:SSF47459 Pathway_Interaction_DB:smad2_3nuclearpathway
GO:GO:0048468 GO:GO:0070888 GO:GO:0045787 GO:GO:0000080
GO:GO:0002326 GO:GO:0043966 GO:GO:0000788 eggNOG:NOG282899
GO:GO:0033152 HOVERGEN:HBG003854 GO:GO:0001779 PDB:3U5V PDBsum:3U5V
EMBL:M31522 EMBL:AC005321 GO:GO:0070644 CleanEx:HS_TCF3 EMBL:M31523
EMBL:M31222 EMBL:AC006274 EMBL:BC110579 EMBL:M24404 EMBL:M24405
EMBL:X52078 EMBL:M65214 IPI:IPI00013929 IPI:IPI00216911 PIR:A34734
PIR:S10099 RefSeq:NP_001129611.1 RefSeq:NP_003191.1
UniGene:Hs.371282 UniGene:Hs.657044 PDB:1HLH PDBsum:1HLH
ProteinModelPortal:P15923 SMR:P15923 DIP:DIP-74N IntAct:P15923
STRING:P15923 PhosphoSite:P15923 DMDM:135655 PaxDb:P15923
PRIDE:P15923 Ensembl:ENST00000262965 Ensembl:ENST00000344749
Ensembl:ENST00000453954 GeneID:6929 KEGG:hsa:6929 UCSC:uc002lto.3
UCSC:uc002lts.1 CTD:6929 GeneCards:GC19M001609 HGNC:HGNC:11633
HPA:CAB018351 MIM:147141 neXtProt:NX_P15923 PharmGKB:PA164742580
KO:K09063 PhylomeDB:P15923 ChiTaRS:TCF3 GenomeRNAi:6929
NextBio:27113 ArrayExpress:P15923 Bgee:P15923 Genevestigator:P15923
GermOnline:ENSG00000071564 Uniprot:P15923
Length = 654
Score = 462 (167.7 bits), Expect = 4.0e-50, Sum P(3) = 4.0e-50
Identities = 153/407 (37%), Positives = 197/407 (48%)
Query: 160 ENMGYM----SPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSPIVQ 215
E MGY +GG +S+ SS + +S+ P SG S G
Sbjct: 272 ERMGYQLHGAEVNGGLPSASSFSSAPGATYGGVSSHTPPV--SGADS---LLGSRG---- 322
Query: 216 TTGPGPGDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEW--VSGPHASSPH 273
TT GD +GKALASIY D A S+W P A SP
Sbjct: 323 TTAGSSGDALGKALASIYSPDHSSNNFSSSPSTPVGSPQGL-AGTSQWPRAGAPGALSPS 381
Query: 274 FTSDHRGLHMSIPEQQRLDEAIGYLRSH---TEGMEECLDDAINVIRNHADGQLNLPGLS 330
+ GL I + LDEAI LRSH T G L + + G ++L G
Sbjct: 382 YDGGLHGLQSKI--EDHLDEAIHVLRSHAVGTAGDMHTLLPGHGALASGFTGPMSLGGRH 439
Query: 331 HPSPGGSLLYHQHLGNSHAVSSTVGAIPA--GYLAGLASSSDT-DGHIKIENIANSSKKR 387
GGS L S ++ A+P+ G L L+ D+ G + A +S+ +
Sbjct: 440 AGLVGGSHP-EDGLAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSGLGRAGATAAASEIK 498
Query: 388 KELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRSRRYCSSADEDSED---PQTKAMREK 444
+E D + S +D K ++ R +S DED +D P+ KA REK
Sbjct: 499 REEKEDEENTS-AADH---------SEEEKKELKAPRARTSPDEDEDDLLPPEQKAEREK 548
Query: 445 ERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRE 504
ERR ANN RER+R+RDINEA KELGRMC HL ++KPQTKL IL+ AV VI++LEQQVRE
Sbjct: 549 ERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQTKLLILHQAVSVILNLEQQVRE 608
Query: 505 RNLNPKAACLRRREEEKAEDSVG-PKLGHHLSAVSQHMGIQPPSFPS 550
RNLNPKAACL+RREEEK VG P++ LSA H G+ P+
Sbjct: 609 RNLNPKAACLKRREEEKVSGVVGDPQMV--LSA--PHPGLSEAHNPA 651
Score = 47 (21.6 bits), Expect = 4.0e-50, Sum P(3) = 4.0e-50
Identities = 19/55 (34%), Positives = 25/55 (45%)
Query: 148 NLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQS 202
+L+P + L PP G+ GG SS + PLPP S P +SG S
Sbjct: 220 SLHPSAELWSPPGQAGFGPMLGG--GSSPL------PLPPGS---GPVGSSGSSS 263
Score = 42 (19.8 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 22 SNSYANNNTDSFSPDSPYFPFIMPPGRTVPPASIKRKRESIEPP-ENSDVDGAHGWYDEF 80
S+ Y ++ + + D+ +P P T P A S+ P E G G+
Sbjct: 182 SSVYPPSSGEDYGRDATAYPSAKTPSSTYP-APFYVADGSLHPSAELWSPPGQAGFGPML 240
Query: 81 GQASSP 86
G SSP
Sbjct: 241 GGGSSP 246
Score = 41 (19.5 bits), Expect = 4.0e-50, Sum P(3) = 4.0e-50
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 78 DEFGQASSPRFVSHKPNPSSIYTDPYYI 105
+++G+ ++ + S K PSS Y P+Y+
Sbjct: 191 EDYGRDATA-YPSAK-TPSSTYPAPFYV 216
>UNIPROTKB|P30985 [details] [associations]
symbol:TCF12 "Transcription factor 12" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0070888 "E-box binding" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0046982 GO:GO:0045666
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0070888 KO:K15603
EMBL:M97634 EMBL:U12974 EMBL:X64295 EMBL:M87337 IPI:IPI00590677
UniGene:Gga.4007 UniGene:Gga.56002 ProteinModelPortal:P30985
KEGG:gga:396334 CTD:6938 HOVERGEN:HBG003854 NextBio:20816382
Uniprot:P30985
Length = 657
Score = 374 (136.7 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 95/185 (51%), Positives = 111/185 (60%)
Query: 364 GLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRSR 423
GL S S G +I+ S K K+ I E SD M K S R R
Sbjct: 480 GLQSQSVAIGPTEIK----SEHKEKDENIH---EPPSSDDMKSDDESSQKDI-KVSSRGR 531
Query: 424 RYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQT 483
++ DED +P+ K REKERR ANN RER+R+RDINEA KELGRMC HLK++KPQT
Sbjct: 532 TSSTNEDEDL-NPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQT 590
Query: 484 KLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAE----DSVGPKLGHH--LSAV 537
KL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK + P G H LS
Sbjct: 591 KLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAVSAEPPTPHPGSHPGLSET 650
Query: 538 SQHMG 542
+ MG
Sbjct: 651 TNPMG 655
Score = 182 (69.1 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 99/358 (27%), Positives = 146/358 (40%)
Query: 30 TDSFSPDSPYFPFIMPPGRTVP--------PASIKRKRESIEPPENSDVDGAHGWYDEFG 81
+ S P++PY+ F R P P K+ R+ P S V D+F
Sbjct: 96 SSSGKPETPYYSFSATSSRRRPKHDSVALDPLQAKKVRKV--PGLPSSVYRPSPNSDDFN 153
Query: 82 QASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAIST 141
+ SP + S KP P+S++ +++ + + ST
Sbjct: 154 R-ESPSYPSPKP-PTSMFASTFFMQDGTHSSSDLWSSSNGMSQPGFGGILGT------ST 205
Query: 142 SNHLSQN-LYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTI-RNPAAASG 199
S H+SQ+ Y +LH + + Y S P D I S LPPMS+ R ++S
Sbjct: 206 S-HMSQSGSY--GSLH-SHDRLSYPPHSVSPTD------INTS-LPPMSSFHRGSTSSSP 254
Query: 200 VQSPSLYPGHNSP--IVQTTGPGPG-----DTVGKALASIYPADQXXXXXXXXXXXXXXX 252
+ S P N IV T G G G D +GKALASIY D
Sbjct: 255 YVAASHTPPVNGSDSIVGTKGNGAGGSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGS 314
Query: 253 XXXXXAQNSEWV-SGPHA-SSPHFTSDHRGLHMSIPEQ--QRLDEAIGYLR-----SHTE 303
S+W SG A SSP++ + L + +Q + L +A+ +L+ S E
Sbjct: 315 PSPLTGA-SQWSRSGGQAPSSPNYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQSRME 373
Query: 304 GMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGY 361
+ LDDAI+V+RNHA G P S G + H LG SH + +G++ + Y
Sbjct: 374 DRLDRLDDAIHVLRNHAVG----PSTSLSGGHGDI--HSLLGPSH--NGPIGSLNSSY 423
Score = 47 (21.6 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 29 NTDSFSPDSPYFPFIMPP 46
N+D F+ +SP +P PP
Sbjct: 148 NSDDFNRESPSYPSPKPP 165
>RGD|620914 [details] [associations]
symbol:Tcf3 "transcription factor 3" species:10116 "Rattus
norvegicus" [GO:0000080 "G1 phase of mitotic cell cycle"
evidence=ISO;ISS] [GO:0000788 "nuclear nucleosome" evidence=ISO]
[GO:0001779 "natural killer cell differentiation" evidence=ISO]
[GO:0002326 "B cell lineage commitment" evidence=ISO;ISS]
[GO:0003677 "DNA binding" evidence=ISO;ISS] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0003713
"transcription coactivator activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005667 "transcription factor complex"
evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0008134 "transcription
factor binding" evidence=ISO;ISS;IPI] [GO:0010628 "positive
regulation of gene expression" evidence=ISO;IDA] [GO:0030098
"lymphocyte differentiation" evidence=ISO] [GO:0030165 "PDZ domain
binding" evidence=IPI] [GO:0030890 "positive regulation of B cell
proliferation" evidence=ISO;ISS] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=ISO] [GO:0032496
"response to lipopolysaccharide" evidence=ISO] [GO:0033077 "T cell
differentiation in thymus" evidence=ISO] [GO:0033152
"immunoglobulin V(D)J recombination" evidence=ISO] [GO:0042493
"response to drug" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043234 "protein
complex" evidence=ISO;ISS] [GO:0043425 "bHLH transcription factor
binding" evidence=ISO;IPI] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;ISS] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043967 "histone H4 acetylation" evidence=ISO]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISO;ISS] [GO:0045787 "positive regulation of cell cycle"
evidence=ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046982 "protein heterodimerization
activity" evidence=ISO;ISS] [GO:0048468 "cell development"
evidence=ISO] [GO:0048541 "Peyer's patch development" evidence=ISO]
[GO:0050821 "protein stabilization" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO;ISS] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070644 "vitamin D
response element binding" evidence=ISO] [GO:0070888 "E-box binding"
evidence=ISO;ISS;IDA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISO] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 RGD:620914 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0043234 GO:GO:0042803
GO:GO:0050821 GO:GO:0051091 GO:GO:0042493 GO:GO:0003677
GO:GO:0043565 GO:GO:0032496 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0003713
GO:GO:0030890 GO:GO:0043967 GO:GO:0033077 GO:GO:0046982
GO:GO:0045666 GO:GO:0048541 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0008134 GO:GO:0048468 GO:GO:0070888 GO:GO:0045787
GO:GO:0000080 GO:GO:0002326 GO:GO:0043966 GO:GO:0000788
eggNOG:NOG282899 GO:GO:0033152 HOVERGEN:HBG003854
HOGENOM:HOG000234180 GO:GO:0001779 GO:GO:0070644 CTD:6929 KO:K09063
OrthoDB:EOG4HX50S EMBL:X54549 EMBL:X62323 EMBL:AJ973227 EMBL:S77532
IPI:IPI00205321 IPI:IPI00231856 PIR:A35816 PIR:B35816 PIR:I78853
RefSeq:NP_001030314.1 RefSeq:NP_598208.2 UniGene:Rn.10290
ProteinModelPortal:P21677 STRING:P21677 GeneID:171046
KEGG:rno:171046 UCSC:RGD:620914 InParanoid:P21677 NextBio:621569
ArrayExpress:P21677 Genevestigator:P21677
GermOnline:ENSRNOG00000016970 Uniprot:P21677
Length = 649
Score = 461 (167.3 bits), Expect = 8.1e-50, Sum P(3) = 8.1e-50
Identities = 146/380 (38%), Positives = 187/380 (49%)
Query: 194 PAAASGVQSPSLYPG---HNSPIVQ---------TTGPGPGDTVGKALASIYPADQXXXX 241
PA +S +P Y G H P+ TT GD +GKALASIY D
Sbjct: 285 PAVSSFSAAPGTYSGTSGHTPPVSGADSLLGTRGTTASSSGDALGKALASIYSPDHSSNN 344
Query: 242 XXXXXXXXXXXXXXXXAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLR 299
S+W P A SP++ + GLH + RLDEAI LR
Sbjct: 345 FSPSPSTPVGSPQGLPG-TSQWPRAGAPSALSPNYDA---GLHGLSKMEDRLDEAIHVLR 400
Query: 300 SHTEGMEECLDDAI---NVIRNHADGQLNLPGL-------SHPSPG---GSLLYHQHLGN 346
SH G L + + + G ++L G SHP G G+ L H H
Sbjct: 401 SHAVGTASELHGLLPGHSTLTTSFAGPMSLGGRHAGLVSGSHPEDGLTSGASLLHNHA-- 458
Query: 347 SHAVSSTVGAIPAGYLAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMXX 406
++ S ++P L+ S + G + A +S+ ++E D + S+ +
Sbjct: 459 --SLPSQPSSLPD--LSQRPPDSFS-GLGRAGVTAGASEIKREEKEDEEVTSVADAE--- 510
Query: 407 XXXXXXXXXXKGSKRSRRYCSSADEDSED---PQTKAMREKERRQANNVRERIRIRDINE 463
K + R +S DED +D P+ KA REKERR ANN RER+R+RDINE
Sbjct: 511 --------EDKKDLKVPRTRTSPDEDEDDLLPPEQKAEREKERRVANNARERLRVRDINE 562
Query: 464 ALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAE 523
A KELGRMC HL T+KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK
Sbjct: 563 AFKELGRMCQLHLSTEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVS 622
Query: 524 DSVG-PKLGHHLSAVSQHMG 542
VG P+L LSA +G
Sbjct: 623 GVVGDPQLA--LSAAHPGLG 640
Score = 44 (20.5 bits), Expect = 8.1e-50, Sum P(3) = 8.1e-50
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 145 LSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASP 184
LSQ + P L L + G +SPSG + S +S ++P
Sbjct: 121 LSQAGFLPGELGL--SSPGPLSPSGVKSSSQYYTSFPSNP 158
Score = 42 (19.8 bits), Expect = 8.1e-50, Sum P(3) = 8.1e-50
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 10 NGAADMDNGMSYSNSYANNNTDSFSPDSPY 39
+G D + S+ NS N+ SF P Y
Sbjct: 49 SGLEDRPSSESWGNS--EQNSSSFDPSRAY 76
Score = 40 (19.1 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 95 PSSIYTDPYYI 105
PSS Y P+Y+
Sbjct: 207 PSSAYPSPFYV 217
>UNIPROTKB|F1LRL7 [details] [associations]
symbol:Tcf3 "Transcription factor E2-alpha" species:10116
"Rattus norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:620914 GO:GO:0005737 GO:GO:0050821 GO:GO:0051091
GO:GO:0042493 GO:GO:0043565 GO:GO:0032496 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0005667
GO:GO:0003713 GO:GO:0030890 GO:GO:0043967 GO:GO:0033077
GO:GO:0048541 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048468
GO:GO:0045787 GO:GO:0000080 GO:GO:0043966 GO:GO:0000788
GeneTree:ENSGT00510000046438 GO:GO:0033152 GO:GO:0001779
GO:GO:0070644 IPI:IPI00205321 Ensembl:ENSRNOT00000023473
ArrayExpress:F1LRL7 Uniprot:F1LRL7
Length = 649
Score = 461 (167.3 bits), Expect = 1.0e-49, Sum P(3) = 1.0e-49
Identities = 146/380 (38%), Positives = 187/380 (49%)
Query: 194 PAAASGVQSPSLYPG---HNSPIVQ---------TTGPGPGDTVGKALASIYPADQXXXX 241
PA +S +P Y G H P+ TT GD +GKALASIY D
Sbjct: 285 PAVSSFSAAPGTYSGTSGHTPPVSGADSLLGTRGTTASSSGDALGKALASIYSPDHSSNN 344
Query: 242 XXXXXXXXXXXXXXXXAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLR 299
S+W P A SP++ + GLH + RLDEAI LR
Sbjct: 345 FSPSPSTPVGSPQGLPG-TSQWPRAGAPSALSPNYDA---GLHGLSKMEDRLDEAIHVLR 400
Query: 300 SHTEGMEECLDDAI---NVIRNHADGQLNLPGL-------SHPSPG---GSLLYHQHLGN 346
SH G L + + + G ++L G SHP G G+ L H H
Sbjct: 401 SHAVGTASELHGLLPGHSTLTTSFAGPMSLGGRHAGLVSGSHPEDGLTSGASLLHNHA-- 458
Query: 347 SHAVSSTVGAIPAGYLAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMXX 406
++ S ++P L+ S + G + A +S+ ++E D + S+ +
Sbjct: 459 --SLPSQPSSLPD--LSQRPPDSFS-GLGRAGVTAGASEIKREEKEDEEVTSVADAE--- 510
Query: 407 XXXXXXXXXXKGSKRSRRYCSSADEDSED---PQTKAMREKERRQANNVRERIRIRDINE 463
K + R +S DED +D P+ KA REKERR ANN RER+R+RDINE
Sbjct: 511 --------EDKKDLKVPRTRTSPDEDEDDLLPPEQKAEREKERRVANNARERLRVRDINE 562
Query: 464 ALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAE 523
A KELGRMC HL T+KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK
Sbjct: 563 AFKELGRMCQLHLSTEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVS 622
Query: 524 DSVG-PKLGHHLSAVSQHMG 542
VG P+L LSA +G
Sbjct: 623 GVVGDPQLA--LSAAHPGLG 640
Score = 44 (20.5 bits), Expect = 1.0e-49, Sum P(3) = 1.0e-49
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 145 LSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASP 184
LSQ + P L L + G +SPSG + S +S ++P
Sbjct: 121 LSQAGFLPGELGL--SSPGPLSPSGVKSSSQYYTSFPSNP 158
Score = 41 (19.5 bits), Expect = 1.0e-49, Sum P(3) = 1.0e-49
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 10 NGAADMDNGMSYSNSYANNNTDSFSPDSPY 39
+G D + S+ NS N+ SF P Y
Sbjct: 49 SGLEDRPSSGSWGNS--EQNSSSFDPSRAY 76
Score = 40 (19.1 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 95 PSSIYTDPYYI 105
PSS Y P+Y+
Sbjct: 207 PSSAYPSPFYV 217
>UNIPROTKB|P98180 [details] [associations]
symbol:TCF3 "Transcription factor E2-alpha" species:10036
"Mesocricetus auratus" [GO:0000080 "G1 phase of mitotic cell cycle"
evidence=ISS] [GO:0002326 "B cell lineage commitment" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISS] [GO:0005667
"transcription factor complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0030890 "positive regulation of B cell
proliferation" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISS] [GO:0045787 "positive regulation of cell cycle"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0070888 "E-box
binding" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0043234 GO:GO:0042803 GO:GO:0051091 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0003713 GO:GO:0030890 GO:GO:0046982 GO:GO:0045666
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0070888
GO:GO:0045787 GO:GO:0000080 GO:GO:0002326 HOVERGEN:HBG003854
PIR:A37953 PIR:B37953 ProteinModelPortal:P98180 Uniprot:P98180
Length = 649
Score = 455 (165.2 bits), Expect = 1.7e-49, Sum P(3) = 1.7e-49
Identities = 146/379 (38%), Positives = 188/379 (49%)
Query: 194 PAAASGVQSPSLY---PGHNSPIVQ---------TTGPGPGDTVGKALASIYPADQXXXX 241
PA +S +P Y GH P+ TT GD +GKALASIY D
Sbjct: 285 PAVSSFSAAPGTYGGASGHTPPVSGADSLMGTRGTTASSSGDALGKALASIYSPDHSSNN 344
Query: 242 XXXXXXXXXXXXXXXXAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLR 299
S+W P A SP + GLH + RLDEAI LR
Sbjct: 345 FSPSPSTPVGSPQGLPG-TSQWPRAGAPSALSPTYDG---GLHGLSKMEDRLDEAIHVLR 400
Query: 300 SHTEGMEECLDDAINVIRNHADGQLNLPGLSHPSP-GG---SLLYHQH----LGNSHAVS 351
SH G D ++ H + PG P P GG L+ H L + ++
Sbjct: 401 SHAVGTAS---DLHGLLPGHGALTTSFPG---PVPLGGRHAGLVGGGHPEDGLTSGTSLL 454
Query: 352 STVGAIP--AGYLAGLASSS-DTDGHI-KIENIANSSKKRKELTIDTKTESICSDQMXXX 407
T ++P A L L+ D+ G + + A +S+ ++E D ++ S+ +
Sbjct: 455 HTHASLPSQASSLPDLSQRPPDSYGGLGRAGAPAGASEIKREEKDDEESTSVADAE---- 510
Query: 408 XXXXXXXXXKGSKRSRRYCSSADEDSED---PQTKAMREKERRQANNVRERIRIRDINEA 464
K ++ R +S DED +D P+ KA REKERR ANN RER+R+RDINEA
Sbjct: 511 -------EDKKDLKAPRTRTSPDEDEDDLLPPEQKAEREKERRVANNARERLRVRDINEA 563
Query: 465 LKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAED 524
KELGRMC HL ++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK
Sbjct: 564 FKELGRMCQLHLSSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSG 623
Query: 525 SVG-PKLGHHLSAVSQHMG 542
VG P+L LSA +G
Sbjct: 624 VVGDPQLA--LSAAHPGLG 640
Score = 51 (23.0 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 22/83 (26%), Positives = 35/83 (42%)
Query: 22 SNSYANNNTDSFSPDSPYFPFIMPPGRTVP-P-----ASIKRKRESIEPPENSDVDGAHG 75
S+ Y +++ DS+ D+ +P PG P P S+ E PP + G
Sbjct: 183 SSVYPSSSGDSYGRDAAAYPSAKTPGSAYPSPFYVADGSLHPSAELWSPPSQA------G 236
Query: 76 WYDEFGQASSPRFVSHKPNPSSI 98
+ G SSP ++ P SS+
Sbjct: 237 FGPMLGDGSSPLPLA--PGSSSV 257
Score = 47 (21.6 bits), Expect = 1.7e-49, Sum P(3) = 1.7e-49
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 37 SPYFP-FIMPPGRTVPPASIKRKRESIE--PP--ENSDVDGAHGWYDEFGQASSPRFVSH 91
S Y+P + P R + + + + + PP +S + G D +G+ ++ + S
Sbjct: 148 SQYYPSYPSNPRRRAADSGLDTQSKKVRKVPPGLPSSVYPSSSG--DSYGRDAAA-YPSA 204
Query: 92 KPNPSSIYTDPYYI 105
K P S Y P+Y+
Sbjct: 205 K-TPGSAYPSPFYV 217
Score = 42 (19.8 bits), Expect = 1.7e-49, Sum P(3) = 1.7e-49
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 10 NGAADMDNGMSYSNSYANNNTDSFSPDSPY 39
+G D + S+ NS + N+ SF P Y
Sbjct: 49 SGLEDRPSSGSWGNS--DQNSSSFDPSRTY 76
>UNIPROTKB|F1NVE3 [details] [associations]
symbol:F1NVE3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00510000046438 EMBL:AADN02040328 EMBL:AADN02040329
EMBL:AADN02040330 EMBL:AADN02040331 EMBL:AADN02040332
EMBL:AADN02040333 EMBL:AADN02040334 EMBL:AADN02040335
EMBL:AADN02040336 EMBL:AADN02040337 EMBL:AADN02040338
EMBL:AADN02040339 EMBL:AADN02040340 EMBL:AADN02045539
IPI:IPI00596242 Ensembl:ENSGALT00000006988 OMA:RYADEDC
ArrayExpress:F1NVE3 Uniprot:F1NVE3
Length = 517
Score = 361 (132.1 bits), Expect = 2.5e-49, Sum P(3) = 2.5e-49
Identities = 82/136 (60%), Positives = 98/136 (72%)
Query: 419 SKRSRRY-CSSA----DEDSE-DPQTKAMREKERRQANNVRERIRIRDINEALKELGRMC 472
S+RS + CS+A +ED + +P+ K REKERR ANN RER+R+RDINEA KELGRMC
Sbjct: 380 SERSVAHPCSAALRSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMC 439
Query: 473 MAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAE----DSVGP 528
HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK + P
Sbjct: 440 QLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAVSAEPPTP 499
Query: 529 KLGHH--LSAVSQHMG 542
G H LS + MG
Sbjct: 500 HPGSHPGLSETTNPMG 515
Score = 172 (65.6 bits), Expect = 2.5e-49, Sum P(3) = 2.5e-49
Identities = 85/302 (28%), Positives = 127/302 (42%)
Query: 78 DEFGQASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEH 137
DEF + SP + S KP PSS++ +++ + +
Sbjct: 9 DEFNR-ESPSYPSPKP-PSSMFASTFFMQDGTHNSSDLWSSSNGMSQPGYGGMLG----- 61
Query: 138 AISTSNHLSQN-LYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTI-RNPA 195
+S+H+SQ+ Y +LH + + Y S P D I AS LPPMS+ R
Sbjct: 62 --GSSSHMSQSGSY--GSLHTH-DRLSYPPHSVSPTD------INAS-LPPMSSFHRGST 109
Query: 196 AASGVQSPSLYPGHNSP--IVQTTGPGPG-----DTVGKALASIYPADQXXXXXXXXXXX 248
++S + S P N I+ G G G D +GKALASIY D
Sbjct: 110 SSSPYVAASHTPPVNGSENILGKKGNGAGGSQTGDALGKALASIYSPDHTSSSFPSNPST 169
Query: 249 XXXXXXXXXAQNSEWV-SGPHA-SSPHFTSDHRGLHMSIPEQ--QRLDEAIGYLR----- 299
S+W SG A SSP++ + L + +Q + L +A+ +L+
Sbjct: 170 PVGSPSPLTGA-SQWSRSGGQAPSSPNYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQ 228
Query: 300 SHTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPA 359
S E + LDDAI+V+RNHA G P S G + H LG SH + +G++ +
Sbjct: 229 SRMEDRLDRLDDAIHVLRNHAVG----PSTSLSGGHGDI--HSLLGPSH--NGPIGSLNS 280
Query: 360 GY 361
Y
Sbjct: 281 SY 282
Score = 159 (61.0 bits), Expect = 5.9e-22, Sum P(3) = 5.9e-22
Identities = 42/112 (37%), Positives = 61/112 (54%)
Query: 419 SKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKT 478
S S + ++ DED +P+ K REKERR ANN RER+R+RDINEA KELGRM +
Sbjct: 309 SSYSWLFSTNEDEDL-NPEQKIEREKERRMANNARERLRVRDINEAFKELGRMYETADSS 367
Query: 479 ----DKPQTKLGI-LNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDS 525
PQ++ ++A +L + +LNP+ R +E A ++
Sbjct: 368 PGCGSHPQSRAASERSVAHPCSAALRSTNEDEDLNPEQKIEREKERRMANNA 419
Score = 43 (20.2 bits), Expect = 2.5e-49, Sum P(3) = 2.5e-49
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 25 YANN-NTDSFSPDSPYFPFIMPP 46
YA + ++D F+ +SP +P PP
Sbjct: 2 YAPSPSSDEFNRESPSYPSPKPP 24
>UNIPROTKB|F1NWV2 [details] [associations]
symbol:F1NWV2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00510000046438 EMBL:AADN02040328 EMBL:AADN02040329
EMBL:AADN02040330 EMBL:AADN02040331 EMBL:AADN02040332
EMBL:AADN02040333 EMBL:AADN02040334 EMBL:AADN02040335
EMBL:AADN02040336 EMBL:AADN02040337 EMBL:AADN02040338
EMBL:AADN02040339 EMBL:AADN02040340 EMBL:AADN02045539
IPI:IPI00822068 Ensembl:ENSGALT00000006857 ArrayExpress:F1NWV2
Uniprot:F1NWV2
Length = 491
Score = 361 (132.1 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 82/136 (60%), Positives = 98/136 (72%)
Query: 419 SKRSRRY-CSSA----DEDSE-DPQTKAMREKERRQANNVRERIRIRDINEALKELGRMC 472
S+RS + CS+A +ED + +P+ K REKERR ANN RER+R+RDINEA KELGRMC
Sbjct: 354 SERSVAHPCSAALRSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMC 413
Query: 473 MAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAE----DSVGP 528
HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK + P
Sbjct: 414 QLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAVSAEPPTP 473
Query: 529 KLGHH--LSAVSQHMG 542
G H LS + MG
Sbjct: 474 HPGSHPGLSETTNPMG 489
Score = 162 (62.1 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 74/239 (30%), Positives = 107/239 (44%)
Query: 141 TSNHLSQN-LYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTI-RNPAAAS 198
+S+H+SQ+ Y +LH + + Y S P D I AS LPPMS+ R ++S
Sbjct: 37 SSSHMSQSGSY--GSLHTH-DRLSYPPHSVSPTD------INAS-LPPMSSFHRGSTSSS 86
Query: 199 GVQSPSLYPGHNSP--IVQTTGPGPG-----DTVGKALASIYPADQXXXXXXXXXXXXXX 251
+ S P N I+ G G G D +GKALASIY D
Sbjct: 87 PYVAASHTPPVNGSENILGNRGNGAGGSQTGDALGKALASIYSPDHTSSSFPSNPSTPVG 146
Query: 252 XXXXXXAQNSEWV-SGPHA-SSPHFTSDHRGLHMSIPEQ--QRLDEAIGYLR-----SHT 302
S+W SG A SSP++ + L + +Q + L +A+ +L+ S
Sbjct: 147 SPSPLTGA-SQWSRSGGQAPSSPNYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQSRM 205
Query: 303 EGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGY 361
E + LDDAI+V+RNHA G P S G + H LG SH + +G++ + Y
Sbjct: 206 EDRLDRLDDAIHVLRNHAVG----PSTSLSGGHGDI--HSLLGPSH--NGPIGSLNSSY 256
Score = 159 (61.0 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 42/112 (37%), Positives = 61/112 (54%)
Query: 419 SKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKT 478
S S + ++ DED +P+ K REKERR ANN RER+R+RDINEA KELGRM +
Sbjct: 283 SSYSWLFSTNEDEDL-NPEQKIEREKERRMANNARERLRVRDINEAFKELGRMYETADSS 341
Query: 479 ----DKPQTKLGI-LNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDS 525
PQ++ ++A +L + +LNP+ R +E A ++
Sbjct: 342 PGCGSHPQSRAASERSVAHPCSAALRSTNEDEDLNPEQKIEREKERRMANNA 393
>UNIPROTKB|A6QPK5 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070888 "E-box binding" evidence=IEA] [GO:0065004
"protein-DNA complex assembly" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0001093 "TFIIB-class transcription factor
binding" evidence=IEA] [GO:0001087 "TFIIB-class binding
transcription factor activity" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001011
"sequence-specific DNA binding RNA polymerase recruiting
transcription factor activity" evidence=IEA] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0003714 GO:GO:0005667 GO:GO:0000978 GO:GO:0001077
GO:GO:0000122 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0006367 GO:GO:0070888 eggNOG:NOG282899
GeneTree:ENSGT00510000046438 GO:GO:0065004 HOVERGEN:HBG003854
HOGENOM:HOG000234180 OrthoDB:EOG4Z62N3 GO:GO:0001011 GO:GO:0001087
OMA:HPHDRLS EMBL:DAAA02057094 EMBL:DAAA02057095 EMBL:DAAA02057096
EMBL:DAAA02057097 EMBL:DAAA02057098 EMBL:DAAA02057099
EMBL:DAAA02057100 EMBL:DAAA02057101 EMBL:BC149366 EMBL:AB447354
IPI:IPI00699049 UniGene:Bt.72435 UniGene:Bt.91190 STRING:A6QPK5
Ensembl:ENSBTAT00000031010 InParanoid:A6QPK5 Uniprot:A6QPK5
Length = 647
Score = 370 (135.3 bits), Expect = 3.8e-48, Sum P(3) = 3.8e-48
Identities = 81/130 (62%), Positives = 92/130 (70%)
Query: 417 KGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHL 476
K RSR S+ D++ P+ KA REKERR ANN RER+R+RDINEA KELGRM HL
Sbjct: 518 KSITRSRS--SNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHL 575
Query: 477 KTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH- 533
K+DKPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H
Sbjct: 576 KSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHP 635
Query: 534 -LSAVSQHMG 542
+ S HMG
Sbjct: 636 GMGDASNHMG 645
Score = 154 (59.3 bits), Expect = 3.8e-48, Sum P(3) = 3.8e-48
Identities = 73/229 (31%), Positives = 103/229 (44%)
Query: 156 HLPPENMGYMS--PS---GGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHN 210
H+P ++ Y S P G P+ SS + I +S LPPMST + + S S P N
Sbjct: 223 HIP-QSSSYCSLHPHERLGYPSHSS--ADINSS-LPPMSTFHR-SGTNHYSSSSCTPPAN 277
Query: 211 SP--IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSE 262
I+ G G GD +GKALASIY D A +
Sbjct: 278 GTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAV 337
Query: 263 WV-SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHA 320
W SG ASS + ++ G LH S+ Q R+++ + E LDDAI+V+RNHA
Sbjct: 338 WSRSGGQASS---SPNYEGPLH-SL--QSRIEDRL-----------ERLDDAIHVLRNHA 380
Query: 321 DGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSS 369
G P + P G + H +G SH + +G + +GY GL S++
Sbjct: 381 VG----PSTAMPGGHGDM--HGIIGPSH--NGAMGGLASGYGTGLLSAN 421
Score = 49 (22.3 bits), Expect = 3.8e-48, Sum P(3) = 3.8e-48
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDE 79
S+ YA + +T ++ DSP +P P T P + + S +P +S G+
Sbjct: 158 SSVYAPSASTADYNRDSPGYPSSKPAASTFPSSFFMQDGHHSSDPWSSSSGMNQPGYGGM 217
Query: 80 FGQAS 84
G +S
Sbjct: 218 LGNSS 222
Score = 39 (18.8 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 163 GYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQS 202
G+ SPS D + +T+ L + P S +QS
Sbjct: 39 GHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS 78
>UNIPROTKB|F1S1Z1 [details] [associations]
symbol:TCF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:HPHDRLS EMBL:CU929941
Ensembl:ENSSSCT00000005009 Uniprot:F1S1Z1
Length = 484
Score = 366 (133.9 bits), Expect = 4.8e-48, Sum P(3) = 4.8e-48
Identities = 78/121 (64%), Positives = 89/121 (73%)
Query: 428 SADEDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKL 485
+++ D ED P+ KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL
Sbjct: 362 TSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKL 421
Query: 486 GILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH--LSAVSQHM 541
IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H + S HM
Sbjct: 422 LILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHM 481
Query: 542 G 542
G
Sbjct: 482 G 482
Score = 118 (46.6 bits), Expect = 4.8e-48, Sum P(3) = 4.8e-48
Identities = 61/205 (29%), Positives = 87/205 (42%)
Query: 156 HLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSP- 212
H+P ++ Y S P + S+ S+ S LPPMST + + + S P N
Sbjct: 64 HIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR-SGTNHYSTSSCTPPANGTD 121
Query: 213 -IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEWV- 264
I+ G G GD +GKALASIY D A + W
Sbjct: 122 SIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSR 181
Query: 265 SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQ 323
+G ASS + ++ G LH S+ Q R+++ + E L DAI+V+RNHA G
Sbjct: 182 NGGQASS---SPNYEGPLH-SL--QSRIEDRL-----------ESLYDAIHVLRNHAVG- 223
Query: 324 LNLPGLSHPSPGGSLLYHQHLGNSH 348
P + P G + H +G SH
Sbjct: 224 ---PSTAMPGGHGDM--HGIIGPSH 243
Score = 46 (21.3 bits), Expect = 4.8e-48, Sum P(3) = 4.8e-48
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 25 YANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDEFGQ 82
YA + +T ++ DSP +P P T P + + S +P +S G+ G
Sbjct: 2 YAPSASTADYNRDSPGYPSSKPAASTFPSSFFMQDGHHSSDPWSSSSGMNQPGYGGMLGN 61
Query: 83 AS 84
+S
Sbjct: 62 SS 63
>UNIPROTKB|K7GQG7 [details] [associations]
symbol:TCF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00510000046438
EMBL:CU929941 Ensembl:ENSSSCT00000036505 Uniprot:K7GQG7
Length = 511
Score = 370 (135.3 bits), Expect = 9.5e-48, Sum P(3) = 9.5e-48
Identities = 81/130 (62%), Positives = 92/130 (70%)
Query: 417 KGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHL 476
K RSR S+ D++ P+ KA REKERR ANN RER+R+RDINEA KELGRM HL
Sbjct: 382 KSITRSRS--SNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHL 439
Query: 477 KTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH- 533
K+DKPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H
Sbjct: 440 KSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHP 499
Query: 534 -LSAVSQHMG 542
+ S HMG
Sbjct: 500 GMGDASNHMG 509
Score = 118 (46.6 bits), Expect = 9.5e-48, Sum P(3) = 9.5e-48
Identities = 61/205 (29%), Positives = 87/205 (42%)
Query: 156 HLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSP- 212
H+P ++ Y S P + S+ S+ S LPPMST + + + S P N
Sbjct: 87 HIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR-SGTNHYSTSSCTPPANGTD 144
Query: 213 -IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEWV- 264
I+ G G GD +GKALASIY D A + W
Sbjct: 145 SIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSR 204
Query: 265 SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQ 323
+G ASS + ++ G LH S+ Q R+++ + E L DAI+V+RNHA G
Sbjct: 205 NGGQASS---SPNYEGPLH-SL--QSRIEDRL-----------ESLYDAIHVLRNHAVG- 246
Query: 324 LNLPGLSHPSPGGSLLYHQHLGNSH 348
P + P G + H +G SH
Sbjct: 247 ---PSTAMPGGHGDM--HGIIGPSH 266
Score = 47 (21.6 bits), Expect = 9.5e-48, Sum P(3) = 9.5e-48
Identities = 19/71 (26%), Positives = 30/71 (42%)
Query: 19 MSYSNS---YANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGA 73
M Y N YA + +T ++ DSP +P P T P + + S +P +S
Sbjct: 16 MYYYNGKAVYAPSASTADYNRDSPGYPSSKPAASTFPSSFFMQDGHHSSDPWSSSSGMNQ 75
Query: 74 HGWYDEFGQAS 84
G+ G +S
Sbjct: 76 PGYGGMLGNSS 86
>UNIPROTKB|B7Z5M6 [details] [associations]
symbol:TCF4 "cDNA FLJ58684, highly similar to Transcription
factor 4" species:9606 "Homo sapiens" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IEA] [GO:0001011
"sequence-specific DNA binding RNA polymerase recruiting
transcription factor activity" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001087 "TFIIB-class
binding transcription factor activity" evidence=IEA] [GO:0001093
"TFIIB-class transcription factor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0065004 "protein-DNA
complex assembly" evidence=IEA] [GO:0070888 "E-box binding"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0003714 GO:GO:0005667 GO:GO:0000978
GO:GO:0001077 GO:GO:0000122 GO:GO:0045666 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0006367 GO:GO:0070888 KO:K15603 GO:GO:0065004
HOVERGEN:HBG003854 HOGENOM:HOG000234180 CTD:6925 EMBL:AC013587
EMBL:AC018994 EMBL:AC090383 EMBL:AC090684 EMBL:AC091103
UniGene:Hs.605153 GeneID:6925 KEGG:hsa:6925 HGNC:HGNC:11634
ChiTaRS:TCF4 GenomeRNAi:6925 NextBio:27093 GO:GO:0001011
GO:GO:0001087 EMBL:AK299169 IPI:IPI01015919 RefSeq:NP_001230155.1
RefSeq:NP_001230156.1 RefSeq:NP_001230157.1 SMR:B7Z5M6
STRING:B7Z5M6 Ensembl:ENST00000537578 Ensembl:ENST00000568673
UCSC:uc010xdy.1 Uniprot:B7Z5M6
Length = 647
Score = 370 (135.3 bits), Expect = 2.0e-47, Sum P(3) = 2.0e-47
Identities = 81/130 (62%), Positives = 92/130 (70%)
Query: 417 KGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHL 476
K RSR S+ D++ P+ KA REKERR ANN RER+R+RDINEA KELGRM HL
Sbjct: 518 KSITRSRS--SNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHL 575
Query: 477 KTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH- 533
K+DKPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H
Sbjct: 576 KSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHP 635
Query: 534 -LSAVSQHMG 542
+ S HMG
Sbjct: 636 GMGDASNHMG 645
Score = 148 (57.2 bits), Expect = 2.0e-47, Sum P(3) = 2.0e-47
Identities = 72/245 (29%), Positives = 110/245 (44%)
Query: 140 STSNHLSQNLYPP---STLHLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNP 194
S+S+ ++Q Y ++ H+P ++ Y S P + S+ S+ S LPPMST
Sbjct: 204 SSSSGMNQPGYAGMLGNSSHIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR- 261
Query: 195 AAASGVQSPSLYPGHNSP--IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXX 246
+ + + S P N I+ G G GD +GKALASIY D
Sbjct: 262 SGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNP 321
Query: 247 XXXXXXXXXXXAQNSEWV-SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEG 304
A + W +G ASS + ++ G LH S+ Q R+++ +
Sbjct: 322 STPVGSPPSLSAGTAVWSRNGGQASS---SPNYEGPLH-SL--QSRIEDRL--------- 366
Query: 305 MEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAG 364
E LDDAI+V+RNHA G P + P G + H +G SH + +G + +GY G
Sbjct: 367 --ERLDDAIHVLRNHAVG----PSTAMPGGHGDM--HGIIGPSH--NGAMGGLGSGYGTG 416
Query: 365 LASSS 369
L S++
Sbjct: 417 LLSAN 421
Score = 48 (22.0 bits), Expect = 2.0e-47, Sum P(3) = 2.0e-47
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDE 79
S+ YA + +T ++ DSP +P P T P + + S +P +S G+
Sbjct: 158 SSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGM 217
Query: 80 FGQAS 84
G +S
Sbjct: 218 LGNSS 222
Score = 42 (19.8 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 161 NMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQS 202
N G+ SPS D + +T+ L + P S +QS
Sbjct: 37 NGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS 78
>UNIPROTKB|F1NIE9 [details] [associations]
symbol:F1NIE9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0070888 "E-box binding" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0045893
GO:GO:0003700 GO:GO:0005667 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0070888 GeneTree:ENSGT00510000046438 EMBL:AADN02040328
EMBL:AADN02040329 EMBL:AADN02040330 EMBL:AADN02040331
EMBL:AADN02040332 EMBL:AADN02040333 EMBL:AADN02040334
EMBL:AADN02040335 EMBL:AADN02040336 EMBL:AADN02040337
EMBL:AADN02040338 EMBL:AADN02040339 EMBL:AADN02040340
EMBL:AADN02045539 IPI:IPI00682726 Ensembl:ENSGALT00000034417
ArrayExpress:F1NIE9 Uniprot:F1NIE9
Length = 577
Score = 373 (136.4 bits), Expect = 2.5e-47, Sum P(3) = 2.5e-47
Identities = 80/127 (62%), Positives = 93/127 (73%)
Query: 423 RRYCSSADEDSE-DPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKP 481
R CSS +ED + +P+ K REKERR ANN RER+R+RDINEA KELGRMC HLK++KP
Sbjct: 449 RLSCSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKP 508
Query: 482 QTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAE----DSVGPKLGHH--LS 535
QTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK + P G H LS
Sbjct: 509 QTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAVSAEPPTPHPGSHPGLS 568
Query: 536 AVSQHMG 542
+ MG
Sbjct: 569 ETTNPMG 575
Score = 127 (49.8 bits), Expect = 2.5e-47, Sum P(3) = 2.5e-47
Identities = 76/292 (26%), Positives = 118/292 (40%)
Query: 171 PADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSP------IVQTTGPGPG-- 222
P S + + I AS LPPMS+ + +S SP + H P I+ G G G
Sbjct: 171 PPHSVSPTDINAS-LPPMSSFHRGSTSS---SPYVAASHTPPVNGSENILGNRGNGAGGS 226
Query: 223 ---DTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEWVSGPHASSPHFTSDHR 279
D +GKALASIY D S+W S +P +
Sbjct: 227 QTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGA-SQW-SRSGGQAPSSPNYEN 284
Query: 280 GLHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLL 339
LH S+ Q R+++ + + LDDAI+V+RNHA G P S G +
Sbjct: 285 SLH-SL--QSRMEDRL-----------DRLDDAIHVLRNHAVG----PSTSLSGGHGDI- 325
Query: 340 YHQHLGNSHAVSSTVGAIPAGYLAG-LASSSDTDGHIKIE-NIANSSKKRKELTIDTKTE 397
H LG SH + +G++ + Y A L +++ + I N+ + + + +K
Sbjct: 326 -HSLLGPSH--NGPIGSLNSSYGASSLVAANRQASMVNIFLNVCVAVQSSYSCPLFSKIG 382
Query: 398 SICSDQMXXXXXXXXXXXXKGSKR----SRRYCSSADEDSE-DPQTKAMREK 444
+ ++ K R + CSS +ED + +P+ K REK
Sbjct: 383 T-GKKELFKNTLINLSGGQKNKGRLTVPAWLSCSSTNEDEDLNPEQKIEREK 433
Score = 46 (21.3 bits), Expect = 2.5e-47, Sum P(3) = 2.5e-47
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPP 46
S+ YA + ++D F+ +SP +P PP
Sbjct: 85 SSVYAPSPSSDEFNRESPSYPSPKPP 110
>ZFIN|ZDB-GENE-090814-1 [details] [associations]
symbol:tcf4 "transcription factor 4" species:7955
"Danio rerio" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0002088 "lens development in camera-type eye"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-090814-1 GO:GO:0007420 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0002088 EMBL:HQ113097 IPI:IPI00864914
UniGene:Dr.153729 PRIDE:E2J8V4 Bgee:E2J8V4 Uniprot:E2J8V4
Length = 677
Score = 464 (168.4 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 148/428 (34%), Positives = 206/428 (48%)
Query: 137 HAISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAA 196
H+ +S++ L+P L P + ++PS P S + S ++ ST A
Sbjct: 262 HSAQSSSYCG--LHPHDRLSYPSHSSAEINPSLPPMSSFHRSGGSSH----YSTASCSAT 315
Query: 197 ASGVQSPSLYPGHNSPIVQTTGPGPGDTVGKALASIYPADQXXXXXXXXXXXXXXXX-XX 255
+G S + S + GD +GKALASIY D
Sbjct: 316 TNGTDSTM---ANRSSSAAGSSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPAL 372
Query: 256 XXAQNSEWV-SGPHASSPHFTSDHRGLHMSIPEQ-QRLDEAIGYLRSHTEGMEECL---- 309
A + W +G ASSP + L I ++ +RLD+AI LRSH G +
Sbjct: 373 TAASTAVWSRNGQGASSPSYEPPLHSLQSRIEDRLERLDDAIHVLRSHAVGPSTAMAGAH 432
Query: 310 DDAINVIR-NHA-DGQLN--LPGLSHPSPGGSLLY-HQH--LGNSHAVSSTVGAIPAGYL 362
D +I +H+ +G + GL PS SL+ H+ L + H++ S +P L
Sbjct: 433 PDMHGLITPSHSHNGAMGGYSSGLL-PSNRHSLMVGHREEALRSGHSIVSN--QVPGSQL 489
Query: 363 AGLASSS----DTDGHIKIENIANSSKKRKELTIDTKTESICSDQMXXXXXXXXXXXXKG 418
+ A++S +D + + + + ++ D K+E D+
Sbjct: 490 SVQAATSPDLSQSDPYRAL-SAGLQGQSTSSVSSDIKSEDE-GDENLQDSKSLDKKDDLD 547
Query: 419 SKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKT 478
SK + S+ D++ P+ K REKERR ANN RER+R+RDINEA KELGRMC HLK+
Sbjct: 548 SKDLKGLESANDDEDLTPEQKLEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKS 607
Query: 479 DKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGP---KLGHH-L 534
DKPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P HH +
Sbjct: 608 DKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSDGAPLSLAAAHHAM 667
Query: 535 SAVSQHMG 542
S MG
Sbjct: 668 GEASNPMG 675
Score = 48 (22.0 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDE 79
S+ YA + +T ++ DSP +P PG + P + S +P +S G+
Sbjct: 197 SSVYAPSASTADYNRDSPGYPSSKAPGSSFPSSFFMPDGHHSTDPWSSSGSMNQPGYNSM 256
Query: 80 FGQAS 84
G ++
Sbjct: 257 LGNST 261
>UNIPROTKB|H3BTP3 [details] [associations]
symbol:TCF4 "Transcription factor 4" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 KO:K15603 CTD:6925 EMBL:AC013587
EMBL:AC018994 EMBL:AC090383 EMBL:AC090684 EMBL:AC091103
UniGene:Hs.605153 GeneID:6925 KEGG:hsa:6925 HGNC:HGNC:11634
ChiTaRS:TCF4 GenomeRNAi:6925 RefSeq:NP_001230157.1
ProteinModelPortal:H3BTP3 SMR:H3BTP3 Ensembl:ENST00000564403
Bgee:H3BTP3 Uniprot:H3BTP3
Length = 677
Score = 370 (135.3 bits), Expect = 7.3e-47, Sum P(3) = 7.3e-47
Identities = 81/130 (62%), Positives = 92/130 (70%)
Query: 417 KGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHL 476
K RSR S+ D++ P+ KA REKERR ANN RER+R+RDINEA KELGRM HL
Sbjct: 548 KSITRSRS--SNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHL 605
Query: 477 KTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH- 533
K+DKPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H
Sbjct: 606 KSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHP 665
Query: 534 -LSAVSQHMG 542
+ S HMG
Sbjct: 666 GMGDASNHMG 675
Score = 148 (57.2 bits), Expect = 7.3e-47, Sum P(3) = 7.3e-47
Identities = 72/245 (29%), Positives = 110/245 (44%)
Query: 140 STSNHLSQNLYPP---STLHLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNP 194
S+S+ ++Q Y ++ H+P ++ Y S P + S+ S+ S LPPMST
Sbjct: 234 SSSSGMNQPGYAGMLGNSSHIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR- 291
Query: 195 AAASGVQSPSLYPGHNSP--IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXX 246
+ + + S P N I+ G G GD +GKALASIY D
Sbjct: 292 SGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNP 351
Query: 247 XXXXXXXXXXXAQNSEWV-SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEG 304
A + W +G ASS + ++ G LH S+ Q R+++ +
Sbjct: 352 STPVGSPPSLSAGTAVWSRNGGQASS---SPNYEGPLH-SL--QSRIEDRL--------- 396
Query: 305 MEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAG 364
E LDDAI+V+RNHA G P + P G + H +G SH + +G + +GY G
Sbjct: 397 --ERLDDAIHVLRNHAVG----PSTAMPGGHGDM--HGIIGPSH--NGAMGGLGSGYGTG 446
Query: 365 LASSS 369
L S++
Sbjct: 447 LLSAN 451
Score = 45 (20.9 bits), Expect = 7.3e-47, Sum P(3) = 7.3e-47
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 25 YANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDEFGQ 82
YA + +T ++ DSP +P P T P + + S +P +S G+ G
Sbjct: 191 YAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGN 250
Query: 83 AS 84
+S
Sbjct: 251 SS 252
Score = 42 (19.8 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 161 NMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQS 202
N G+ SPS D + +T+ L + P S +QS
Sbjct: 61 NGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS 102
>UNIPROTKB|F1PDB2 [details] [associations]
symbol:TCF4 "Transcription factor 4" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00510000046438 OMA:HPHDRLS EMBL:AAEX03000135
EMBL:AAEX03000136 EMBL:AAEX03000137 EMBL:AAEX03000138
EMBL:AAEX03000139 EMBL:AAEX03000140 Ensembl:ENSCAFT00000000232
Uniprot:F1PDB2
Length = 666
Score = 366 (133.9 bits), Expect = 9.8e-47, Sum P(3) = 9.8e-47
Identities = 78/121 (64%), Positives = 89/121 (73%)
Query: 428 SADEDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKL 485
+++ D ED P+ KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL
Sbjct: 544 TSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKL 603
Query: 486 GILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH--LSAVSQHM 541
IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H + S HM
Sbjct: 604 LILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHM 663
Query: 542 G 542
G
Sbjct: 664 G 664
Score = 153 (58.9 bits), Expect = 9.8e-47, Sum P(3) = 9.8e-47
Identities = 70/229 (30%), Positives = 103/229 (44%)
Query: 153 STLHLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHN 210
S+ H+P ++ Y S P + S+ S+ S LPPMST R+ + + S P N
Sbjct: 244 SSSHIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFRS--GTNHYSTSSCTPPAN 300
Query: 211 SP--IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSE 262
I+ G G GD +GKALASIY D A +
Sbjct: 301 GTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAV 360
Query: 263 WV-SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHA 320
W +G ASS + ++ G LH S+ Q R+++ + E LDDAI+V+RNHA
Sbjct: 361 WSRNGGQASS---SPNYEGPLH-SL--QSRIEDRL-----------ERLDDAIHVLRNHA 403
Query: 321 DGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSS 369
G P + P G + H +G SH + +G + +GY GL S++
Sbjct: 404 VG----PSTAMPGGHGDM--HGIIGPSH--NGAMGGLGSGYGTGLLSAN 444
Score = 49 (22.3 bits), Expect = 9.8e-47, Sum P(3) = 9.8e-47
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDE 79
S+ YA + +T ++ DSP +P P T P + + S +P +S G+
Sbjct: 182 SSVYAPSASTADYNRDSPGYPSSKPAASTFPSSFFMQDGHHSSDPWSSSSGMNQPGYGGM 241
Query: 80 FGQAS 84
G +S
Sbjct: 242 LGSSS 246
Score = 42 (19.8 bits), Expect = 4.9e-34, Sum P(3) = 4.9e-34
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 161 NMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQS 202
N G+ SPS D + +T+ L + P S +QS
Sbjct: 61 NGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS 102
Score = 38 (18.4 bits), Expect = 4.9e-34, Sum P(3) = 4.9e-34
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 321 DGQLNLPGLSHPSPGGSLLYHQHLGNS 347
D + PG P+ GS Y+Q+ N+
Sbjct: 130 DMDMGTPGTLSPTKPGSQ-YYQYSSNN 155
>UNIPROTKB|P15881 [details] [associations]
symbol:TCF4 "Transcription factor 4" species:9615 "Canis
lupus familiaris" [GO:0070888 "E-box binding" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0046982
GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0070888
eggNOG:NOG282899 KO:K15603 HOVERGEN:HBG003854 HOGENOM:HOG000234180
EMBL:X51448 PIR:S34416 RefSeq:NP_001003268.1 UniGene:Cfa.3808
ProteinModelPortal:P15881 STRING:P15881 GeneID:403949
KEGG:cfa:403949 CTD:6925 InParanoid:P15881 OrthoDB:EOG4Z62N3
NextBio:20817439 Uniprot:P15881
Length = 642
Score = 366 (133.9 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 78/121 (64%), Positives = 89/121 (73%)
Query: 428 SADEDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKL 485
+++ D ED P+ KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL
Sbjct: 520 TSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKL 579
Query: 486 GILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH--LSAVSQHM 541
IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H + S HM
Sbjct: 580 LILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHM 639
Query: 542 G 542
G
Sbjct: 640 G 640
Score = 150 (57.9 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 69/229 (30%), Positives = 102/229 (44%)
Query: 153 STLHLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHN 210
S+ H+P ++ Y S P + S+ S+ S LPPMST + + + S P N
Sbjct: 219 SSSHIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR-SGTNHYSTSSCTPPAN 276
Query: 211 SP--IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSE 262
I+ G G GD +GKALASIY D A +
Sbjct: 277 GTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAV 336
Query: 263 WV-SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHA 320
W +G ASS + ++ G LH S+ Q R+++ + E LDDAI+V+RNHA
Sbjct: 337 WSRNGGQASS---SPNYEGPLH-SL--QSRIEDRL-----------ERLDDAIHVLRNHA 379
Query: 321 DGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSS 369
G P + P G + H +G SH + +G + +GY GL S++
Sbjct: 380 VG----PSTAMPGGHGDM--HGIIGPSH--NGAMGGLGSGYGTGLLSAN 420
Score = 49 (22.3 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDE 79
S+ YA + +T ++ DSP +P P T P + + S +P +S G+
Sbjct: 157 SSVYAPSASTADYNRDSPGYPSSKPAASTFPSSFFMQDGHHSSDPWSSSSGMNQPGYGGM 216
Query: 80 FGQAS 84
G +S
Sbjct: 217 LGSSS 221
Score = 42 (19.8 bits), Expect = 3.1e-34, Sum P(3) = 3.1e-34
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 161 NMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQS 202
N G+ SPS D + +T+ L + P S +QS
Sbjct: 37 NGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS 78
Score = 38 (18.4 bits), Expect = 3.1e-34, Sum P(3) = 3.1e-34
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 321 DGQLNLPGLSHPSPGGSLLYHQHLGNS 347
D + PG P+ GS Y+Q+ N+
Sbjct: 105 DMDMGTPGTLSPTKPGSQ-YYQYSSNN 130
>UNIPROTKB|E9PH57 [details] [associations]
symbol:TCF4 "Transcription factor 4" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 KO:K15603 CTD:6925 EMBL:AC013587
EMBL:AC018994 EMBL:AC090383 EMBL:AC090684 EMBL:AC091103
IPI:IPI00221261 UniGene:Hs.605153 GeneID:6925 KEGG:hsa:6925
HGNC:HGNC:11634 ChiTaRS:TCF4 GenomeRNAi:6925 NextBio:27093
RefSeq:NP_001230155.1 ProteinModelPortal:E9PH57 SMR:E9PH57
Ensembl:ENST00000398339 UCSC:uc002lga.3 OMA:HPHDRLS
ArrayExpress:E9PH57 Bgee:E9PH57 Uniprot:E9PH57
Length = 773
Score = 370 (135.3 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 81/130 (62%), Positives = 92/130 (70%)
Query: 417 KGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHL 476
K RSR S+ D++ P+ KA REKERR ANN RER+R+RDINEA KELGRM HL
Sbjct: 644 KSITRSRS--SNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHL 701
Query: 477 KTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH- 533
K+DKPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H
Sbjct: 702 KSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHP 761
Query: 534 -LSAVSQHMG 542
+ S HMG
Sbjct: 762 GMGDASNHMG 771
Score = 148 (57.2 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 72/245 (29%), Positives = 110/245 (44%)
Query: 140 STSNHLSQNLYPP---STLHLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNP 194
S+S+ ++Q Y ++ H+P ++ Y S P + S+ S+ S LPPMST
Sbjct: 330 SSSSGMNQPGYAGMLGNSSHIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR- 387
Query: 195 AAASGVQSPSLYPGHNSP--IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXX 246
+ + + S P N I+ G G GD +GKALASIY D
Sbjct: 388 SGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNP 447
Query: 247 XXXXXXXXXXXAQNSEWV-SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEG 304
A + W +G ASS + ++ G LH S+ Q R+++ +
Sbjct: 448 STPVGSPPSLSAGTAVWSRNGGQASS---SPNYEGPLH-SL--QSRIEDRL--------- 492
Query: 305 MEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAG 364
E LDDAI+V+RNHA G P + P G + H +G SH + +G + +GY G
Sbjct: 493 --ERLDDAIHVLRNHAVG----PSTAMPGGHGDM--HGIIGPSH--NGAMGGLGSGYGTG 542
Query: 365 LASSS 369
L S++
Sbjct: 543 LLSAN 547
Score = 48 (22.0 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDE 79
S+ YA + +T ++ DSP +P P T P + + S +P +S G+
Sbjct: 284 SSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGM 343
Query: 80 FGQAS 84
G +S
Sbjct: 344 LGNSS 348
Score = 42 (19.8 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 161 NMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQS 202
N G+ SPS D + +T+ L + P S +QS
Sbjct: 163 NGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS 204
>UNIPROTKB|F6Y2I2 [details] [associations]
symbol:TCF12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00510000046438 KO:K15603 CTD:6938 EMBL:AAEX03016163
EMBL:AAEX03016164 RefSeq:XP_003433962.1 Ensembl:ENSCAFT00000025756
GeneID:100684199 KEGG:cfa:100684199 Uniprot:F6Y2I2
Length = 675
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 174/539 (32%), Positives = 242/539 (44%)
Query: 30 TDSFSPDSPYFPFIMPPGRTVP--------PASIKRKRESIEPPENSDVDGAHGWYDEFG 81
+ S P +PY+ F R P P K+ R+ + P S V D+F
Sbjct: 140 SSSGKPGTPYYSFSATSSRRRPLHDSAALDPLQAKKVRK-VPPGLPSSVYAPSPNSDDFN 198
Query: 82 QASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAIST 141
+ SP + S KP P+S++ +++ + + H +
Sbjct: 199 R-ESPSYPSPKP-PTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSASHMSQS 256
Query: 142 SNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQ 201
S++ S L+ L PP ++ P D I S LPPMS+ + +S
Sbjct: 257 SSYGS--LHSHDRLSYPPHSVS-------PTD------INTS-LPPMSSFHRGSTSS--- 297
Query: 202 SPSLYPGHNSPI--------VQTTGPGP---GDTVGKALASIYPADQXXXXXXXXXXXXX 250
SP + H PI + T G GD +GKALASIY D
Sbjct: 298 SPYVAASHTPPINGSDSILGTRGTAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPV 357
Query: 251 XXXXXXXAQNSEWV--SGPHASSPHFTSDHRGLHMSIPEQ-QRLDEAIGYLRSHTEGMEE 307
S+W G SSP + + L + ++ RLD+AI LR+H G
Sbjct: 358 GSPSPLTG-TSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPST 416
Query: 308 CLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAG------- 360
L H+D +L G SH + GSL + + G S+ V+S+ A G
Sbjct: 417 SLP------AGHSDIH-SLLGPSHNASIGSL--NSNYGGSNLVTSSRSASMVGTHREDSV 467
Query: 361 -------YLAGLASSSDTD-GHIKIENIANSSKKRKELTI--DTKTESICSDQMXXX--X 408
L+ ++S TD H EN + + + + KTE+ D+
Sbjct: 468 SLNGNHSVLSSTVTASSTDLNHKTQENYRGGLQNQSGTVVPAEIKTENKEKDENLHEPPS 527
Query: 409 XXXXXXXXKGSKR-----SRRYCSSADEDSE-DPQTKAMREKERRQANNVRERIRIRDIN 462
+ S++ SR SS +ED + +P+ K REKERR ANN RER+R+RDIN
Sbjct: 528 SDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDIN 587
Query: 463 EALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEK 521
EA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK
Sbjct: 588 EAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEK 646
Score = 387 (141.3 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 124/286 (43%), Positives = 150/286 (52%)
Query: 290 RLDEAIGYLRSHTEGMEECL----DDAINVI---RNHADGQLNL----PGLSHPSPGGSL 338
RLD+AI LR+H G L D +++ N + G LN L S S+
Sbjct: 399 RLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNASIGSLNSNYGGSNLVTSSRSASM 458
Query: 339 L-YHQH----LGNSHAV-SSTVGAIPA--------GYLAGLASSSDT--DGHIKIENIAN 382
+ H+ L +H+V SSTV A Y GL + S T IK EN
Sbjct: 459 VGTHREDSVSLNGNHSVLSSTVTASSTDLNHKTQENYRGGLQNQSGTVVPAEIKTEN--- 515
Query: 383 SSKKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRSRRYCSSADEDSEDPQTKAMR 442
K K+ + E SD M K S R R ++ DED +P+ K R
Sbjct: 516 ---KEKDENLH---EPPSSDDMKSDDESSQKDI-KVSSRGRTSSTNEDEDL-NPEQKIER 567
Query: 443 EKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQV 502
EKERR ANN RER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQV
Sbjct: 568 EKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQV 627
Query: 503 RERNLNPKAACLRRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
RERNLNPKAACL+RREEEK S P G H LS + MG
Sbjct: 628 RERNLNPKAACLKRREEEKVSAVSAEPPTTLPGTHPGLSETTNPMG 673
Score = 51 (23.0 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPP 46
S+ YA + N+D F+ +SP +P PP
Sbjct: 185 SSVYAPSPNSDDFNRESPSYPSPKPP 210
>UNIPROTKB|H3BPJ7 [details] [associations]
symbol:TCF4 "Transcription factor 4" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013587 EMBL:AC018994
EMBL:AC090383 EMBL:AC090684 EMBL:AC091103 HGNC:HGNC:11634
ChiTaRS:TCF4 ProteinModelPortal:H3BPJ7 SMR:H3BPJ7
Ensembl:ENST00000568740 Bgee:H3BPJ7 Uniprot:H3BPJ7
Length = 642
Score = 366 (133.9 bits), Expect = 2.6e-46, Sum P(3) = 2.6e-46
Identities = 78/121 (64%), Positives = 89/121 (73%)
Query: 428 SADEDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKL 485
+++ D ED P+ KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL
Sbjct: 520 TSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKL 579
Query: 486 GILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH--LSAVSQHM 541
IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H + S HM
Sbjct: 580 LILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHM 639
Query: 542 G 542
G
Sbjct: 640 G 640
Score = 148 (57.2 bits), Expect = 2.6e-46, Sum P(3) = 2.6e-46
Identities = 72/245 (29%), Positives = 110/245 (44%)
Query: 140 STSNHLSQNLYPP---STLHLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNP 194
S+S+ ++Q Y ++ H+P ++ Y S P + S+ S+ S LPPMST
Sbjct: 203 SSSSGMNQPGYAGMLGNSSHIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR- 260
Query: 195 AAASGVQSPSLYPGHNSP--IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXX 246
+ + + S P N I+ G G GD +GKALASIY D
Sbjct: 261 SGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNP 320
Query: 247 XXXXXXXXXXXAQNSEWV-SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEG 304
A + W +G ASS + ++ G LH S+ Q R+++ +
Sbjct: 321 STPVGSPPSLSAGTAVWSRNGGQASS---SPNYEGPLH-SL--QSRIEDRL--------- 365
Query: 305 MEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAG 364
E LDDAI+V+RNHA G P + P G + H +G SH + +G + +GY G
Sbjct: 366 --ERLDDAIHVLRNHAVG----PSTAMPGGHGDM--HGIIGPSH--NGAMGGLGSGYGTG 415
Query: 365 LASSS 369
L S++
Sbjct: 416 LLSAN 420
Score = 48 (22.0 bits), Expect = 2.6e-46, Sum P(3) = 2.6e-46
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDE 79
S+ YA + +T ++ DSP +P P T P + + S +P +S G+
Sbjct: 157 SSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGM 216
Query: 80 FGQAS 84
G +S
Sbjct: 217 LGNSS 221
Score = 42 (19.8 bits), Expect = 5.4e-33, Sum P(2) = 5.4e-33
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 161 NMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQS 202
N G+ SPS D + +T+ L + P S +QS
Sbjct: 37 NGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS 78
>UNIPROTKB|B7Z6Y1 [details] [associations]
symbol:TCF4 "cDNA FLJ58695, highly similar to Transcription
factor 4" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG003854 EMBL:AC013587 EMBL:AC018994
EMBL:AC090383 EMBL:AC090684 EMBL:AC091103 UniGene:Hs.605153
HGNC:HGNC:11634 ChiTaRS:TCF4 EMBL:AK301144 EMBL:FR748214
IPI:IPI01013201 SMR:B7Z6Y1 STRING:B7Z6Y1 Ensembl:ENST00000540999
Uniprot:B7Z6Y1
Length = 643
Score = 366 (133.9 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 78/121 (64%), Positives = 89/121 (73%)
Query: 428 SADEDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKL 485
+++ D ED P+ KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL
Sbjct: 521 TSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKL 580
Query: 486 GILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH--LSAVSQHM 541
IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H + S HM
Sbjct: 581 LILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHM 640
Query: 542 G 542
G
Sbjct: 641 G 641
Score = 148 (57.2 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 72/245 (29%), Positives = 110/245 (44%)
Query: 140 STSNHLSQNLYPP---STLHLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNP 194
S+S+ ++Q Y ++ H+P ++ Y S P + S+ S+ S LPPMST
Sbjct: 204 SSSSGMNQPGYAGMLGNSSHIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR- 261
Query: 195 AAASGVQSPSLYPGHNSP--IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXX 246
+ + + S P N I+ G G GD +GKALASIY D
Sbjct: 262 SGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNP 321
Query: 247 XXXXXXXXXXXAQNSEWV-SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEG 304
A + W +G ASS + ++ G LH S+ Q R+++ +
Sbjct: 322 STPVGSPPSLSAGTAVWSRNGGQASS---SPNYEGPLH-SL--QSRIEDRL--------- 366
Query: 305 MEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAG 364
E LDDAI+V+RNHA G P + P G + H +G SH + +G + +GY G
Sbjct: 367 --ERLDDAIHVLRNHAVG----PSTAMPGGHGDM--HGIIGPSH--NGAMGGLGSGYGTG 416
Query: 365 LASSS 369
L S++
Sbjct: 417 LLSAN 421
Score = 48 (22.0 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDE 79
S+ YA + +T ++ DSP +P P T P + + S +P +S G+
Sbjct: 158 SSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGM 217
Query: 80 FGQAS 84
G +S
Sbjct: 218 LGNSS 222
Score = 42 (19.8 bits), Expect = 5.5e-33, Sum P(2) = 5.5e-33
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 161 NMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQS 202
N G+ SPS D + +T+ L + P S +QS
Sbjct: 37 NGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS 78
>UNIPROTKB|F1MV33 [details] [associations]
symbol:TCF12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070888 "E-box binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0045893
GO:GO:0003700 GO:GO:0005667 GO:GO:0045666 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0070888 GeneTree:ENSGT00510000046438
OMA:TSSTNED EMBL:DAAA02028854 EMBL:DAAA02028855 EMBL:DAAA02028856
EMBL:DAAA02028857 EMBL:DAAA02028858 EMBL:DAAA02028859
EMBL:DAAA02028860 EMBL:DAAA02028861 EMBL:DAAA02028862
EMBL:DAAA02028863 EMBL:DAAA02028864 EMBL:DAAA02028865
IPI:IPI00696993 Ensembl:ENSBTAT00000035927 Uniprot:F1MV33
Length = 683
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 175/539 (32%), Positives = 241/539 (44%)
Query: 30 TDSFSPDSPYFPFIMPPGRTVPP------ASIKRKRESIEPPENSD--VDGAHGWYDEFG 81
+ S P +PY+ F R P ++ K+ PP S V D+F
Sbjct: 147 SSSGKPGTPYYSFSATSSRRRPLHDSAALXXLQAKKVRKVPPGLSSFKVYAPSPNSDDFN 206
Query: 82 QASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAIST 141
+ SP + S KP P+S++ +++ + + H +
Sbjct: 207 R-ESPSYPSPKP-PTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQS 264
Query: 142 SNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQ 201
S++ S L+ L PP ++ P D I S LPPMS+ + +S
Sbjct: 265 SSYGS--LHSHDRLSYPPHSVS-------PTD------INTS-LPPMSSFHRASTSS--- 305
Query: 202 SPSLYPGHNSPI------VQTTGPGPG-----DTVGKALASIYPADQXXXXXXXXXXXXX 250
SP + H PI + T G G D +GKALASIY D
Sbjct: 306 SPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPV 365
Query: 251 XXXXXXXAQNSEWV--SGPHASSPHFTSDHRGLHMSIPEQ-QRLDEAIGYLRSHTEGMEE 307
S+W G SSP + + L + ++ RLD+AI LR+H G
Sbjct: 366 GSPSPLTG-TSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPST 424
Query: 308 CLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAG------- 360
L H+D +L G SH +P GSL + + G S V+S+ A G
Sbjct: 425 SLP------AGHSDIH-SLLGPSHNAPIGSL--NSNYGGSSLVTSSRSASMVGTHREDSV 475
Query: 361 -------YLAGLASSSDTD-GHIKIENIANSSKKRKELTIDT--KTESICSDQMXXX--X 408
L+ ++S TD H EN + + + T KTE+ D+
Sbjct: 476 SLNGNHSVLSSTVTASSTDLNHKTQENYRGGLQSQSGTVVPTEIKTENKEKDENLHEPPS 535
Query: 409 XXXXXXXXKGSKR-----SRRYCSSADEDSE-DPQTKAMREKERRQANNVRERIRIRDIN 462
+ S++ SR SS +ED + +P+ K REKERR ANN RER+R+RDIN
Sbjct: 536 SDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDIN 595
Query: 463 EALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEK 521
EA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK
Sbjct: 596 EAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEK 654
Score = 391 (142.7 bits), Expect = 5.7e-39, Sum P(2) = 5.7e-39
Identities = 125/286 (43%), Positives = 148/286 (51%)
Query: 290 RLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLP-GLSHPSPGGSLLY-------- 340
RLD+AI LR+H G L + I + N P G + + GGS L
Sbjct: 407 RLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVTSSRSASM 466
Query: 341 ---HQH----LGNSHAV-SSTVGAIPA--------GYLAGLASSSDT--DGHIKIENIAN 382
H+ L +H+V SSTV A Y GL S S T IK EN
Sbjct: 467 VGTHREDSVSLNGNHSVLSSTVTASSTDLNHKTQENYRGGLQSQSGTVVPTEIKTEN--- 523
Query: 383 SSKKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRSRRYCSSADEDSEDPQTKAMR 442
K K+ + E SD M K S R R ++ DED +P+ K R
Sbjct: 524 ---KEKDENLH---EPPSSDDMKSDDESSQKDI-KVSSRGRTSSTNEDEDL-NPEQKIER 575
Query: 443 EKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQV 502
EKERR ANN RER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQV
Sbjct: 576 EKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQV 635
Query: 503 RERNLNPKAACLRRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
RERNLNPKAACL+RREEEK S P G H LS + MG
Sbjct: 636 RERNLNPKAACLKRREEEKVSAVSAEPPTTLPGTHPGLSETTNPMG 681
Score = 54 (24.1 bits), Expect = 5.7e-39, Sum P(2) = 5.7e-39
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 18 GMSYSNSYANN-NTDSFSPDSPYFPFIMPP 46
G+S YA + N+D F+ +SP +P PP
Sbjct: 189 GLSSFKVYAPSPNSDDFNRESPSYPSPKPP 218
>UNIPROTKB|P15884 [details] [associations]
symbol:TCF4 "Transcription factor 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=ISS;NAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677
"DNA binding" evidence=IDA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0045666 "positive regulation of neuron
differentiation" evidence=ISS] [GO:0070888 "E-box binding"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0065004 "protein-DNA complex assembly" evidence=ISS]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=ISS] [GO:0001011
"sequence-specific DNA binding RNA polymerase recruiting
transcription factor activity" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISS] [GO:0001087 "TFIIB-class
binding transcription factor activity" evidence=ISS] [GO:0005667
"transcription factor complex" evidence=ISS] [GO:0001093
"TFIIB-class transcription factor binding" evidence=ISS]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Reactome:REACT_111045 GO:GO:0003714
Pathway_Interaction_DB:wnt_canonical_pathway GO:GO:0005667
GO:GO:0000978 GO:GO:0001077 GO:GO:0000122 GO:GO:0046982
GO:GO:0045666 GO:GO:0001093 Gene3D:4.10.280.10 SUPFAM:SSF47459
Pathway_Interaction_DB:ar_pathway GO:GO:0006367 GO:GO:0070888
EMBL:CH471096 PDB:2KWF PDBsum:2KWF eggNOG:NOG282899 KO:K15603
GO:GO:0065004 Orphanet:672 HOVERGEN:HBG003854 CTD:6925 EMBL:M74718
EMBL:M74719 EMBL:M74720 EMBL:FR748210 EMBL:FR748211 EMBL:FR748212
EMBL:FR748213 EMBL:FR748217 EMBL:FR748218 EMBL:FR748219
EMBL:FR748220 EMBL:FR748221 EMBL:FR748222 EMBL:AK095041
EMBL:AK096862 EMBL:AK300636 EMBL:AK300038 EMBL:AK300612
EMBL:AK316165 EMBL:AC013587 EMBL:AC018994 EMBL:AC090383
EMBL:AC090684 EMBL:AC091103 EMBL:BC125084 EMBL:BC125085
EMBL:AV761952 EMBL:U75701 EMBL:X52079 IPI:IPI00013492
IPI:IPI00221260 IPI:IPI00221261 PIR:A41311 RefSeq:NP_001077431.1
RefSeq:NP_001230160.1 RefSeq:NP_001230161.1 RefSeq:NP_001230162.1
RefSeq:NP_001230163.1 RefSeq:NP_001230164.1 RefSeq:NP_001230165.1
RefSeq:NP_003190.1 UniGene:Hs.605153 DisProt:DP00224
ProteinModelPortal:P15884 SMR:P15884 DIP:DIP-163N IntAct:P15884
MINT:MINT-4508073 STRING:P15884 PhosphoSite:P15884 DMDM:3915747
PRIDE:P15884 Ensembl:ENST00000354452 Ensembl:ENST00000356073
Ensembl:ENST00000457482 Ensembl:ENST00000537856
Ensembl:ENST00000543082 Ensembl:ENST00000544241
Ensembl:ENST00000561831 Ensembl:ENST00000561992
Ensembl:ENST00000564228 Ensembl:ENST00000564999
Ensembl:ENST00000565018 Ensembl:ENST00000565908
Ensembl:ENST00000566279 Ensembl:ENST00000567880
Ensembl:ENST00000570177 Ensembl:ENST00000570287 GeneID:6925
KEGG:hsa:6925 UCSC:uc002lfw.4 UCSC:uc002lfz.2 UCSC:uc010dph.1
GeneCards:GC18M052889 HGNC:HGNC:11634 HPA:CAB020722 HPA:HPA025958
MIM:602272 MIM:610954 neXtProt:NX_P15884 Orphanet:2896
PharmGKB:PA164742621 ChiTaRS:TCF4 EvolutionaryTrace:P15884
GenomeRNAi:6925 NextBio:27093 ArrayExpress:P15884 Bgee:P15884
CleanEx:HS_TCF4 Genevestigator:P15884 GermOnline:ENSG00000196628
GO:GO:0001011 GO:GO:0001087 Uniprot:P15884
Length = 667
Score = 366 (133.9 bits), Expect = 4.2e-46, Sum P(3) = 4.2e-46
Identities = 78/121 (64%), Positives = 89/121 (73%)
Query: 428 SADEDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKL 485
+++ D ED P+ KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL
Sbjct: 545 TSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKL 604
Query: 486 GILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH--LSAVSQHM 541
IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H + S HM
Sbjct: 605 LILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHM 664
Query: 542 G 542
G
Sbjct: 665 G 665
Score = 148 (57.2 bits), Expect = 4.2e-46, Sum P(3) = 4.2e-46
Identities = 72/245 (29%), Positives = 110/245 (44%)
Query: 140 STSNHLSQNLYPP---STLHLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNP 194
S+S+ ++Q Y ++ H+P ++ Y S P + S+ S+ S LPPMST
Sbjct: 228 SSSSGMNQPGYAGMLGNSSHIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR- 285
Query: 195 AAASGVQSPSLYPGHNSP--IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXX 246
+ + + S P N I+ G G GD +GKALASIY D
Sbjct: 286 SGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNP 345
Query: 247 XXXXXXXXXXXAQNSEWV-SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEG 304
A + W +G ASS + ++ G LH S+ Q R+++ +
Sbjct: 346 STPVGSPPSLSAGTAVWSRNGGQASS---SPNYEGPLH-SL--QSRIEDRL--------- 390
Query: 305 MEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAG 364
E LDDAI+V+RNHA G P + P G + H +G SH + +G + +GY G
Sbjct: 391 --ERLDDAIHVLRNHAVG----PSTAMPGGHGDM--HGIIGPSH--NGAMGGLGSGYGTG 440
Query: 365 LASSS 369
L S++
Sbjct: 441 LLSAN 445
Score = 48 (22.0 bits), Expect = 4.2e-46, Sum P(3) = 4.2e-46
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDE 79
S+ YA + +T ++ DSP +P P T P + + S +P +S G+
Sbjct: 182 SSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGM 241
Query: 80 FGQAS 84
G +S
Sbjct: 242 LGNSS 246
Score = 42 (19.8 bits), Expect = 7.4e-33, Sum P(2) = 7.4e-33
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 161 NMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQS 202
N G+ SPS D + +T+ L + P S +QS
Sbjct: 61 NGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS 102
>UNIPROTKB|Q2TB39 [details] [associations]
symbol:TCF3 "Transcription factor E2-alpha" species:9606
"Homo sapiens" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG003854
HOGENOM:HOG000234180 EMBL:AC005321 EMBL:AC006274 UniGene:Hs.371282
UniGene:Hs.657044 HGNC:HGNC:11633 PharmGKB:PA164742580 ChiTaRS:TCF3
NextBio:27113 EMBL:BC110580 IPI:IPI00719590 SMR:Q2TB39
STRING:Q2TB39 Ensembl:ENST00000395423 UCSC:uc002ltq.3 OMA:AYPAPFY
Uniprot:Q2TB39
Length = 658
Score = 373 (136.4 bits), Expect = 9.9e-46, Sum P(3) = 9.9e-46
Identities = 83/133 (62%), Positives = 97/133 (72%)
Query: 422 SRRYCSSADEDSED---PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKT 478
SRR S DED +D P+ KA REKERR ANN RER+R+RDINEA KELGRMC HL +
Sbjct: 527 SRRPPHSPDEDEDDLLPPEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNS 586
Query: 479 DKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLGHHLSAV 537
+KPQTKL IL+ AV VI++LEQQVRERNLNPKAACL+RREEEK VG P++ LSA
Sbjct: 587 EKPQTKLLILHQAVSVILNLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMV--LSA- 643
Query: 538 SQHMGIQPPSFPS 550
H G+ P+
Sbjct: 644 -PHPGLSEAHNPA 655
Score = 125 (49.1 bits), Expect = 9.9e-46, Sum P(3) = 9.9e-46
Identities = 66/218 (30%), Positives = 82/218 (37%)
Query: 160 ENMGYM----SPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSPIVQ 215
E MGY +GG +S+ SS + +S+ P SG S G
Sbjct: 221 ERMGYQLHGAEVNGGLPSASSFSSAPGATYGGVSSHTPPV--SGADS---LLGSRG---- 271
Query: 216 TTGPGPGDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEW--VSGPHASSPH 273
TT GD +GKALASIY D A S+W P A SP
Sbjct: 272 TTAGSSGDALGKALASIYSPDHSSNNFSSSPSTPVGSPQGL-AGTSQWPRAGAPGALSPS 330
Query: 274 FTSDHRGLHMSIPEQQRLDEAIGYLRSH---TEGMEECLDDAINVIRNHADGQLNLPGL- 329
+ GL I + LDEAI LRSH T G L + + G ++L G
Sbjct: 331 YDGGLHGLQSKI--EDHLDEAIHVLRSHAVGTAGDMHTLLPGHGALASGFTGPMSLGGRH 388
Query: 330 ------SHPSPG--GSL-LYHQHLGNSHAVSSTVGAIP 358
SHP G GS L H H A+ S G +P
Sbjct: 389 AGLVGGSHPEDGLAGSTSLMHNHA----ALPSQPGTLP 422
Score = 67 (28.6 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 26/77 (33%), Positives = 34/77 (44%)
Query: 296 GYLRSHTEGMEECLDDAINVIRNHADGQLN-----LPGLSHPSPGGSLLYHQHLGNSHAV 350
G L +E+ LD+AI+V+R+HA G LPG H + LG HA
Sbjct: 333 GGLHGLQSKIEDHLDEAIHVLRSHAVGTAGDMHTLLPG--HGALASGFTGPMSLGGRHA- 389
Query: 351 SSTVGAIPAGYLAGLAS 367
G+ P LAG S
Sbjct: 390 GLVGGSHPEDGLAGSTS 406
Score = 42 (19.8 bits), Expect = 9.9e-46, Sum P(3) = 9.9e-46
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 22 SNSYANNNTDSFSPDSPYFPFIMPPGRTVPPASIKRKRESIEPP-ENSDVDGAHGWYDEF 80
S+ Y ++ + + D+ +P P T P A S+ P E G G+
Sbjct: 131 SSVYPPSSGEDYGRDATAYPSAKTPSSTYP-APFYVADGSLHPSAELWSPPGQAGFGPML 189
Query: 81 GQASSP 86
G SSP
Sbjct: 190 GGGSSP 195
Score = 41 (19.5 bits), Expect = 1.3e-45, Sum P(3) = 1.3e-45
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 78 DEFGQASSPRFVSHKPNPSSIYTDPYYI 105
+++G+ ++ + S K PSS Y P+Y+
Sbjct: 140 EDYGRDATA-YPSAK-TPSSTYPAPFYV 165
>MGI|MGI:98506 [details] [associations]
symbol:Tcf4 "transcription factor 4" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IDA] [GO:0001011 "sequence-specific DNA binding
RNA polymerase recruiting transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001087 "TFIIB-class binding transcription factor activity"
evidence=IDA] [GO:0001093 "TFIIB-class transcription factor
binding" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003714 "transcription corepressor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=ISO]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0065004 "protein-DNA complex assembly" evidence=IDA]
[GO:0070888 "E-box binding" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 MGI:MGI:98506
GO:GO:0003714 GO:GO:0005667 GO:GO:0000978 GO:GO:0001077
GO:GO:0000122 GO:GO:0046982 GO:GO:0045666 GO:GO:0001093
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0006367 GO:GO:0070888
eggNOG:NOG282899 GeneTree:ENSGT00510000046438 KO:K15603
GO:GO:0065004 HOVERGEN:HBG003854 HOGENOM:HOG000234180 CTD:6925
OrthoDB:EOG4Z62N3 ChiTaRS:TCF4 GO:GO:0001011 GO:GO:0001087
EMBL:S75870 EMBL:U16321 EMBL:U16322 EMBL:X91753 EMBL:AK081012
EMBL:BC043050 IPI:IPI00120128 IPI:IPI00400417 IPI:IPI00400418
PIR:I52648 RefSeq:NP_001077436.1 RefSeq:NP_038713.1 UniGene:Mm.4269
ProteinModelPortal:Q60722 SMR:Q60722 DIP:DIP-42841N IntAct:Q60722
MINT:MINT-2567893 STRING:Q60722 PhosphoSite:Q60722 PRIDE:Q60722
Ensembl:ENSMUST00000078486 Ensembl:ENSMUST00000114978
Ensembl:ENSMUST00000114980 Ensembl:ENSMUST00000114982
Ensembl:ENSMUST00000114985 GeneID:21413 KEGG:mmu:21413
UCSC:uc008fnq.1 UCSC:uc008fns.1 NextBio:300700 Bgee:Q60722
CleanEx:MM_TCF4 Genevestigator:Q60722 GermOnline:ENSMUSG00000053477
Uniprot:Q60722
Length = 670
Score = 367 (134.2 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 80/130 (61%), Positives = 92/130 (70%)
Query: 417 KGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHL 476
K RSR S+ D++ P+ KA REKERR ANN RER+R+RDINEA KELGRM HL
Sbjct: 541 KSITRSRS--SNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHL 598
Query: 477 KTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH- 533
K+DKPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H
Sbjct: 599 KSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHP 658
Query: 534 -LSAVSQHMG 542
+ + HMG
Sbjct: 659 GMGDAANHMG 668
Score = 141 (54.7 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 67/226 (29%), Positives = 100/226 (44%)
Query: 156 HLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSP- 212
H+P ++ Y S P + S+ S+ S LPPMST + + + S P N
Sbjct: 246 HIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR-SGTNHYSTSSCTPPANGTD 303
Query: 213 -IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEWV- 264
I+ G G GD +GKALASIY D A + W
Sbjct: 304 SIMANRGTGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSR 363
Query: 265 SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQ 323
+G ASS + ++ G LH S+ Q R+++ + E LDDAI+V+RNHA G
Sbjct: 364 NGGQASS---SPNYEGPLH-SL--QSRIEDRL-----------ERLDDAIHVLRNHAVG- 405
Query: 324 LNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSS 369
P + P G + H +G SH + +G++ +GY L S++
Sbjct: 406 ---PSTAVPGGHGDM--HGIMGPSH--NGAMGSLGSGYGTSLLSAN 444
Score = 49 (22.3 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDE 79
S+ YA + +T ++ DSP +P P T P + + S +P +S G+
Sbjct: 181 SSVYAPSASTADYNRDSPGYPSSKPAASTFPSSFFMQDGHHSSDPWSSSSGMNQPGYGGM 240
Query: 80 FGQAS 84
G +S
Sbjct: 241 LGNSS 245
Score = 39 (18.8 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 163 GYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQS 202
G+ SPS D + +T+ L + P S +QS
Sbjct: 63 GHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS 102
>UNIPROTKB|E9PTG9 [details] [associations]
symbol:Tcf3 "Transcription factor E2-alpha" species:10116
"Rattus norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:620914 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00510000046438 IPI:IPI00565545
Ensembl:ENSRNOT00000023597 ArrayExpress:E9PTG9 Uniprot:E9PTG9
Length = 646
Score = 428 (155.7 bits), Expect = 2.1e-45, Sum P(3) = 2.1e-45
Identities = 140/375 (37%), Positives = 182/375 (48%)
Query: 194 PAAASGVQSPSLYPG---HNSPIVQ---------TTGPGPGDTVGKALASIYPADQXXXX 241
PA +S +P Y G H P+ TT GD +GKALASIY D
Sbjct: 285 PAVSSFSAAPGTYSGTSGHTPPVSGADSLLGTRGTTASSSGDALGKALASIYSPDHSSNN 344
Query: 242 XXXXXXXXXXXXXXXXAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLR 299
S+W P A SP++ + GLH + RLDEAI LR
Sbjct: 345 FSPSPSTPVGSPQGLPG-TSQWPRAGAPSALSPNYDA---GLHGLSKMEDRLDEAIHVLR 400
Query: 300 SHTEGMEECLDDAI---NVIRNHADGQLNLPGL-------SHPSPGGSLLYHQHLGNSHA 349
SH G L + + + G ++L G SHP G L L ++HA
Sbjct: 401 SHAVGTASELHGLLPGHSTLTTSFAGPMSLGGRHAGLVSGSHPEDG--LTSGASLLHNHA 458
Query: 350 -VSSTVGAIPAGYLAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMXXXX 408
+ S ++P L+ S + G + A +S+ ++E D + S+ +
Sbjct: 459 SLPSQPSSLPD--LSQRPPDSFS-GLGRAGVTAGASEIKREEKEDEEVTSVADAE----- 510
Query: 409 XXXXXXXXKGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKEL 468
K K R SS DE + K +R++ERR ANN RER+R+RDINEA +EL
Sbjct: 511 -----EDKKDLKVPRTRTSSTDEVLS-LEEKDLRDRERRMANNARERVRVRDINEAFREL 564
Query: 469 GRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVG- 527
GRMC HLK+DK QTKL IL AV+VI+ LEQQVRERNLNPKAACL+RREEEK VG
Sbjct: 565 GRMCQLHLKSDKAQTKLLILQQAVQVILGLEQQVRERNLNPKAACLKRREEEKVSGVVGD 624
Query: 528 PKLGHHLSAVSQHMG 542
P+L LSA +G
Sbjct: 625 PQLA--LSAAHPGLG 637
Score = 44 (20.5 bits), Expect = 2.1e-45, Sum P(3) = 2.1e-45
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 145 LSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASP 184
LSQ + P L L + G +SPSG + S +S ++P
Sbjct: 121 LSQAGFLPGELGL--SSPGPLSPSGVKSSSQYYTSFPSNP 158
Score = 41 (19.5 bits), Expect = 2.1e-45, Sum P(3) = 2.1e-45
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 10 NGAADMDNGMSYSNSYANNNTDSFSPDSPY 39
+G D + S+ NS N+ SF P Y
Sbjct: 49 SGLEDRPSSGSWGNS--EQNSSSFDPSRAY 76
Score = 40 (19.1 bits), Expect = 5.4e-45, Sum P(3) = 5.4e-45
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 95 PSSIYTDPYYI 105
PSS Y P+Y+
Sbjct: 207 PSSAYPSPFYV 217
>UNIPROTKB|Q01978 [details] [associations]
symbol:tcf3 "Transcription factor E2-alpha" species:8355
"Xenopus laevis" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045666 "positive regulation of neuron
differentiation" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0046982
GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG003854
CTD:6929 KO:K09063 EMBL:X66959 EMBL:BC046840 PIR:S23391
RefSeq:NP_001079668.1 UniGene:Xl.3864 ProteinModelPortal:Q01978
GeneID:379355 KEGG:xla:379355 Xenbase:XB-GENE-865159 Uniprot:Q01978
Length = 658
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 179/543 (32%), Positives = 244/543 (44%)
Query: 22 SNSYANNNTDSFSPD-----SPYFPFI----MPPGRTVPPASIKRKRESIEPPENSDVDG 72
S A N+ + SP+ S Y+ + PG + A K+ R+ + P S V
Sbjct: 131 SGDLAMNSPSALSPNAGKAGSQYYTYPNNSRRRPGDSNLDAQPKKVRK-VPPGLPSSVYP 189
Query: 73 AHGWYDEF-GQASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXX 131
A+ DE+ G S + S K P+S+Y +Y+ + Q
Sbjct: 190 ANSG-DEYCGDRGS--YASTK-TPNSVYPGAFYMADGLHSSDIWASSGGIGQGGYSSVLN 245
Query: 132 XXXXEHAISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTI 191
S+ + +SQ S+LH P E MG+ SG + S SS +++P +
Sbjct: 246 --------SSQSSVSQTT-GFSSLH-PHERMGFPMHSG-EVNPSVTSSFSSTPAQYGVSS 294
Query: 192 RNPAAASGVQSPSLYPGHNSPIVQTTGPGPGDTVGKALASIYPADQXXXXXXXXXXXXXX 251
P ++G G+ TG GD +GKALASIY D
Sbjct: 295 HTPPISTG----DTIIGNRGT---ATGSS-GDALGKALASIYSPDHSSTNFSSTPSTPVG 346
Query: 252 XXXXXXAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECL 309
+ +W +GP A SP + L + + RLDEAI LRSH G L
Sbjct: 347 SPQGITG-SGQWPRANGPGALSPSYDGTLHTLQNKM--EDRLDEAIHVLRSHAVGQTGAL 403
Query: 310 DDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGA---------IPA- 359
+ I + ++ G P+ SL + NSH + A +PA
Sbjct: 404 PGGHDDIHSLLSATASVLGSGFPAAVLSLANRHSMLNSHTEEALPSASNMLHSQVTVPAQ 463
Query: 360 -GYLAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMXXXXXXXXXXXXKG 418
G L L D+ + + + + + D K ES D+ K
Sbjct: 464 PGSLPDLTRPQDS--YSGLPGLGRAIPPGR--VPDIKRESK-EDEENRSVADLSDDEKKE 518
Query: 419 SK--RSRRYCS--SADEDSED------PQTKAMREKERRQANNVRERIRIRDINEALKEL 468
SK RSR CS S DED ++ P+ KA REKERR ANN RER+R++DINEA KEL
Sbjct: 519 SKPQRSRTRCSINSQDEDEDEDDDNLPPEQKAEREKERRVANNARERLRVKDINEAFKEL 578
Query: 469 GRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGP 528
GRMC HL ++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK V P
Sbjct: 579 GRMCQLHLNSEKPQTKLLILHQAVSVILSLEQQVRERNLNPKAACLKRREEEKVS-GVDP 637
Query: 529 KLG 531
++G
Sbjct: 638 QMG 640
>ZFIN|ZDB-GENE-040516-11 [details] [associations]
symbol:tcf12 "transcription factor 12" species:7955
"Danio rerio" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-040516-11 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00510000046438 EMBL:AL928670
EMBL:BX323544 IPI:IPI00851728 PRIDE:E9QDA6
Ensembl:ENSDART00000131282 ArrayExpress:E9QDA6 Bgee:E9QDA6
Uniprot:E9QDA6
Length = 702
Score = 380 (138.8 bits), Expect = 4.2e-45, Sum P(3) = 4.2e-45
Identities = 84/137 (61%), Positives = 99/137 (72%)
Query: 417 KGSKRS--RRYCSSADEDSE-DPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCM 473
+GS R CSS +ED + +P+ KA RE+ERR ANN RER+R+RDINEA KELGRMC
Sbjct: 566 RGSSRPSCELSCSSINEDEDLNPEQKAERERERRMANNARERLRVRDINEAFKELGRMCQ 625
Query: 474 AHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLGH 532
HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK G P+ H
Sbjct: 626 LHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSGVSGDPQQAH 685
Query: 533 HLSAVSQHMGIQPPSFP 549
AV H G+ S P
Sbjct: 686 --PAV--HPGLTDTSNP 698
Score = 94 (38.1 bits), Expect = 4.2e-45, Sum P(3) = 4.2e-45
Identities = 67/301 (22%), Positives = 103/301 (34%)
Query: 78 DEFGQASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEH 137
++F + SP + S KP P S++ ++ + I H
Sbjct: 198 EDFNR-DSPSYPSPKP-PGSMFASTFF--DGTHNSSDQWNLSNGISQPGYGGMLGGSSSH 253
Query: 138 AISTSN----HLSQNL-YPPSTLHLPPENMGYMSPSGGPADSSNISS--ITASPLPPMST 190
+ N H L YPP ++ P + + P SS +S +TAS PP++T
Sbjct: 254 MPQSGNYSNLHSHDRLNYPPHSVS-PTDINASLPPMSSFHRSSASTSPFVTASHTPPVNT 312
Query: 191 IRNPAAAS---------------GVQSPSLY-PGHNSPIVQTTGPGPGDTVGKALASIYP 234
AA+ G S+Y P H S + P VG
Sbjct: 313 TEGVMAAANRGNATGSSQTGDALGKALASIYSPDHTSSSFPSN---PSTPVGSPSPLAVQ 369
Query: 235 ADQXXXXXXXXXXXXXXXXXXXXAQNSEWV--SGPHASSPHFTSDHRGLHMSIPEQQRLD 292
A A ++W +G SSP + + L RLD
Sbjct: 370 AG-----AATAGTVVTASGPAGRAGTTQWTRATGQAPSSPSYENSLHSLSRMEDRLDRLD 424
Query: 293 EAIGYLRSHTEGMEECLDDAINVIRNHA-DGQLNLPGLSHPSPGGSLLYHQHLGNSHAVS 351
+AI LR+H G L + I+ + A +G ++ G S PS G +G+ H
Sbjct: 425 DAIHVLRNHAVGSTAALSNDIHSLLGQAHNGPISAIGSSFPSSGLVTNRTAQMGSVHREE 484
Query: 352 S 352
S
Sbjct: 485 S 485
Score = 52 (23.4 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
Identities = 25/69 (36%), Positives = 30/69 (43%)
Query: 165 MSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSPIVQTTGPGPGDT 224
+SP+ P SS+I S PP S SG QS +L S I Q PGP T
Sbjct: 95 LSPT--PFMSSSIMG--KSERPPFSGYGREPGVSGCQS-NL----RSDI-QLASPGPVTT 144
Query: 225 VGKALASIY 233
GK+ Y
Sbjct: 145 PGKSPTPFY 153
Score = 49 (22.3 bits), Expect = 4.2e-45, Sum P(3) = 4.2e-45
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 25 YANN-NTDSFSPDSPYFPFIMPPG 47
YA + +++ F+ DSP +P PPG
Sbjct: 191 YAPSPSSEDFNRDSPSYPSPKPPG 214
>UNIPROTKB|G0LNU5 [details] [associations]
symbol:TCF4 "Transcription factor 4, isoform E-"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
KO:K15603 CTD:6925 EMBL:AC013587 EMBL:AC018994 EMBL:AC090383
EMBL:AC090684 EMBL:AC091103 UniGene:Hs.605153 GeneID:6925
KEGG:hsa:6925 HGNC:HGNC:11634 ChiTaRS:TCF4 GenomeRNAi:6925
NextBio:27093 EMBL:FR748216 RefSeq:NP_001230159.1
Ensembl:ENST00000566286 Uniprot:G0LNU5
Length = 664
Score = 366 (133.9 bits), Expect = 5.6e-45, Sum P(3) = 5.6e-45
Identities = 78/121 (64%), Positives = 89/121 (73%)
Query: 428 SADEDSED--PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKL 485
+++ D ED P+ KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL
Sbjct: 542 TSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKL 601
Query: 486 GILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH--LSAVSQHM 541
IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H + S HM
Sbjct: 602 LILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHM 661
Query: 542 G 542
G
Sbjct: 662 G 662
Score = 137 (53.3 bits), Expect = 5.6e-45, Sum P(3) = 5.6e-45
Identities = 71/245 (28%), Positives = 109/245 (44%)
Query: 140 STSNHLSQNLYPP---STLHLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNP 194
S+S+ ++Q Y ++ H+P ++ Y S P + S+ S+ S LPPMST
Sbjct: 226 SSSSGMNQPGYAGMLGNSSHIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR- 283
Query: 195 AAASGVQSPSLYPGHNSP--IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXX 246
+ + + S P N I+ G G GD +GKALASIY D
Sbjct: 284 SGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNP 343
Query: 247 XXXXXXXXXXXAQNSEWV-SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEG 304
+ W +G ASS + ++ G LH S+ Q R+++ +
Sbjct: 344 STPVGSPPSLSG-TAVWSRNGGQASS---SPNYEGPLH-SL--QSRIEDRL--------- 387
Query: 305 MEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAG 364
E LDDAI+V+RNHA G P + P G + H +G SH + +G + +GY G
Sbjct: 388 --ERLDDAIHVLRNHAVG----PSTAMPGGHGDM--HGIIGPSH--NGAMGGLGSGYGTG 437
Query: 365 LASSS 369
L S++
Sbjct: 438 LLSAN 442
Score = 48 (22.0 bits), Expect = 5.6e-45, Sum P(3) = 5.6e-45
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGAHGWYDE 79
S+ YA + +T ++ DSP +P P T P + + S +P +S G+
Sbjct: 180 SSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGM 239
Query: 80 FGQAS 84
G +S
Sbjct: 240 LGNSS 244
Score = 42 (19.8 bits), Expect = 7.1e-33, Sum P(2) = 7.1e-33
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 161 NMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQS 202
N G+ SPS D + +T+ L + P S +QS
Sbjct: 59 NGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS 100
>UNIPROTKB|F1MVI6 [details] [associations]
symbol:TCF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070644 "vitamin D response element binding"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0048541
"Peyer's patch development" evidence=IEA] [GO:0048468 "cell
development" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0033152 "immunoglobulin V(D)J
recombination" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEA] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001779 "natural killer cell differentiation"
evidence=IEA] [GO:0000788 "nuclear nucleosome" evidence=IEA]
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005737 GO:GO:0050821 GO:GO:0051091 GO:GO:0042493
GO:GO:0043565 GO:GO:0032496 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0003713
GO:GO:0030890 GO:GO:0043967 GO:GO:0033077 GO:GO:0048541
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048468 GO:GO:0045787
GO:GO:0000080 GO:GO:0043966 GO:GO:0000788
GeneTree:ENSGT00510000046438 GO:GO:0033152 GO:GO:0001779
GO:GO:0070644 CTD:6929 KO:K09063 OMA:AYPAPFY EMBL:DAAA02020273
EMBL:DAAA02020274 EMBL:DAAA02020275 EMBL:DAAA02020276
IPI:IPI00696597 RefSeq:NP_001179627.1 UniGene:Bt.3789
Ensembl:ENSBTAT00000028599 GeneID:530616 KEGG:bta:530616
NextBio:20875295 Uniprot:F1MVI6
Length = 639
Score = 441 (160.3 bits), Expect = 8.0e-45, Sum P(2) = 8.0e-45
Identities = 138/372 (37%), Positives = 180/372 (48%)
Query: 185 LPPMSTIRNPAAA-SGVQS--PSLYPGHNSPIVQ--TTGPGPGDTVGKALASIYPADQXX 239
LP ST PA S + S P + G +S + TT GD +GKALASIY D
Sbjct: 284 LPAASTFSGPAGTYSSISSHTPPV-SGADSLLGSRGTTSSSSGDALGKALASIYSPDHSS 342
Query: 240 XXXXXXXXXXXXXXXXXXAQNSEWV--SGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGY 297
A S+W P A SP + GL + + LDEAI
Sbjct: 343 NNFSSSPSTPVGSPQGL-AGTSQWPRPGAPGALSPSYDGGLHGLQSKV--EDHLDEAIHV 399
Query: 298 LRSHTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAI 357
LRSH G D ++ H G L G + P LG HA G +
Sbjct: 400 LRSHAVGTA---GDVHGLLPGH--GALT-SGFAGPV--------MPLGGRHA-----GLV 440
Query: 358 PAGYLA-GLASSSD-TDGHIKIENIANSSKKRKELTIDTK--TESICSDQMXXXXXXXXX 413
+G+ GL+ SS H+ + +++ +L T T I ++
Sbjct: 441 GSGHSEDGLSGSSGLVHNHVALPDLSRQPDSYGDLGHGTAPGTTDIKREEQEDEENVAAD 500
Query: 414 XXXKGSK--RSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRM 471
K ++ R SS+ E+ + K +R++ERR ANN RER+R+RDINEA +ELGRM
Sbjct: 501 TAEDEKKDLKAPRTRSSSTEEVLSLEEKDLRDRERRMANNARERVRVRDINEAFRELGRM 560
Query: 472 CMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKL 530
C HLK+DK QTKL IL AV+VI+ LEQQVRERNLNPKAACL+RREEEK VG P++
Sbjct: 561 CQLHLKSDKAQTKLLILQQAVQVILGLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQM 620
Query: 531 GHHLSAVSQHMG 542
LSA +G
Sbjct: 621 V--LSAAHPGLG 630
Score = 49 (22.3 bits), Expect = 8.0e-45, Sum P(2) = 8.0e-45
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 37 SPYFPFIMPPGRTVPPASIKRKRESIE--PP--ENSDVDGAHGWYDEFGQASSPRFVSHK 92
S Y+ + P R +S+ + + + PP +S + G D++G+ P
Sbjct: 147 SQYYSYSGHPRRRATDSSLDSQPKKVRKVPPGLPSSVYPPSSG--DDYGR--DPTTYPSA 202
Query: 93 PNPSSIYTDPYYI 105
PSS Y P+Y+
Sbjct: 203 KTPSSSYPTPFYM 215
Score = 40 (19.1 bits), Expect = 7.0e-44, Sum P(2) = 7.0e-44
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 22 SNSYANNNTDSFSPDSPYFPFIMPPGRTVPPASIKRKRESIEPP-ENSDVDGAHGWYDEF 80
S+ Y ++ D + D +P P + P S+ P E G G+
Sbjct: 181 SSVYPPSSGDDYGRDPTTYPSAKTPSSSYP-TPFYMADGSLHPSAELWSAPGQAGFGPML 239
Query: 81 GQASSP 86
G SSP
Sbjct: 240 GGGSSP 245
>RGD|69271 [details] [associations]
symbol:Tcf4 "transcription factor 4" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0001011 "sequence-specific DNA
binding RNA polymerase recruiting transcription factor activity"
evidence=IEA;ISO] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA;ISO] [GO:0001087 "TFIIB-class binding transcription
factor activity" evidence=IEA;ISO] [GO:0001093 "TFIIB-class
transcription factor binding" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;NAS] [GO:0003714
"transcription corepressor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005667 "transcription factor
complex" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO;ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO;ISS] [GO:0065004
"protein-DNA complex assembly" evidence=IEA;ISO] [GO:0070888 "E-box
binding" evidence=IEA;ISO;ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 RGD:69271 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0046982
GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0070888
eggNOG:NOG282899 KO:K15603 HOVERGEN:HBG003854 HOGENOM:HOG000234180
CTD:6925 OrthoDB:EOG4Z62N3 EMBL:AF149284 EMBL:U09228 IPI:IPI00198397
IPI:IPI00777330 PIR:A53689 RefSeq:NP_445821.1 UniGene:Rn.23354
ProteinModelPortal:Q62655 STRING:Q62655 PRIDE:Q62655 GeneID:84382
KEGG:rno:84382 InParanoid:Q62655 NextBio:616719 ArrayExpress:Q62655
Genevestigator:Q62655 GermOnline:ENSRNOG00000012405 Uniprot:Q62655
Length = 589
Score = 367 (134.2 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 80/130 (61%), Positives = 92/130 (70%)
Query: 417 KGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHL 476
K RSR S+ D++ P+ KA REKERR ANN RER+R+RDINEA KELGRM HL
Sbjct: 460 KSITRSRS--SNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHL 517
Query: 477 KTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK--LGHH- 533
K+DKPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK P G H
Sbjct: 518 KSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHP 577
Query: 534 -LSAVSQHMG 542
+ + HMG
Sbjct: 578 GMGDTANHMG 587
Score = 147 (56.8 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 68/226 (30%), Positives = 101/226 (44%)
Query: 156 HLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSP- 212
H+P ++ Y S P + S+ S+ S LPPMST + + + S P N
Sbjct: 165 HIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR-SGTNHYSTSSCTPPANGTD 222
Query: 213 -IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEWV- 264
I+ G G GD +GKALASIY D A + W
Sbjct: 223 SIMANRGTGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSR 282
Query: 265 SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQ 323
+G ASS + ++ G LH S+ Q R+++ + E LDDAI+V+RNHA G
Sbjct: 283 NGGQASS---SPNYEGPLH-SL--QSRIEDRL-----------ERLDDAIHVLRNHAVG- 324
Query: 324 LNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSS 369
P + P G + H +G SH + +G++ +GY GL S++
Sbjct: 325 ---PSTAVPGGHGDM--HGIIGPSH--NGAMGSLGSGYGTGLLSAN 363
>UNIPROTKB|F1SDI1 [details] [associations]
symbol:TCF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070644 "vitamin D response element binding"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0048541
"Peyer's patch development" evidence=IEA] [GO:0048468 "cell
development" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0033152 "immunoglobulin V(D)J
recombination" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEA] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001779 "natural killer cell differentiation"
evidence=IEA] [GO:0000788 "nuclear nucleosome" evidence=IEA]
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005737 GO:GO:0050821 GO:GO:0051091 GO:GO:0042493
GO:GO:0043565 GO:GO:0032496 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0003713
GO:GO:0030890 GO:GO:0043967 GO:GO:0033077 GO:GO:0048541
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048468 GO:GO:0045787
GO:GO:0000080 GO:GO:0043966 GO:GO:0000788
GeneTree:ENSGT00510000046438 GO:GO:0033152 GO:GO:0001779
GO:GO:0070644 OMA:AYPAPFY EMBL:CU972485 Ensembl:ENSSSCT00000014681
Uniprot:F1SDI1
Length = 684
Score = 359 (131.4 bits), Expect = 1.8e-43, Sum P(5) = 1.8e-43
Identities = 78/130 (60%), Positives = 95/130 (73%)
Query: 420 KRSRRYCSSA---DEDSED---PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCM 473
+R+R + A +ED +D P+ KA REKERR ANN RER+R+RDINEA KELGRMC
Sbjct: 548 QRARAHAQGATGPEEDEDDLLPPEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQ 607
Query: 474 AHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLGH 532
HL ++KPQTKL IL+ AV VI++LEQQVRERNLNPKAACL+RREEEK G P++
Sbjct: 608 LHLNSEKPQTKLLILHQAVSVILNLEQQVRERNLNPKAACLKRREEEKVSGVAGDPQMV- 666
Query: 533 HLSAVSQHMG 542
LSA +G
Sbjct: 667 -LSAAHPGLG 675
Score = 106 (42.4 bits), Expect = 1.8e-43, Sum P(5) = 1.8e-43
Identities = 40/121 (33%), Positives = 50/121 (41%)
Query: 185 LPPMSTIRN-PAAASGVQSPSLYP--GHNSPIVQ--TTGPGPGDTVGKALASIYPADQXX 239
LP +ST + PAAA G S P G + + TT GD +GKALASIY D
Sbjct: 277 LPAVSTFSSVPAAAYGSVSSHTPPVSGADGLLGSRGTTASSSGDALGKALASIYSPDHSS 336
Query: 240 XXXXXXXXXXXXXXXXXXAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGY 297
A S+W P A SP + GL ++ + LDEAI
Sbjct: 337 NNFSSSPSTPVGSPQGL-AGTSQWPRAGAPGALSPSYDGGLHGLLIAEQMEDHLDEAIHV 395
Query: 298 L 298
L
Sbjct: 396 L 396
Score = 50 (22.7 bits), Expect = 3.0e-42, Sum P(4) = 3.0e-42
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 22 SNSYANNNTDSFSPDSPYFPFIMPPGRTVPPASIKRKRESIEPP-ENSDVDGAHGWYDEF 80
S+ Y ++ D +S ++ +P P P S+ PP E G G+
Sbjct: 173 SSVYPPSSGDDYSRNTAAYPSTKTPSSAYP-TPFYMADGSLHPPAELWSPPGQAGFGPML 231
Query: 81 GQASSP 86
G ASSP
Sbjct: 232 GGASSP 237
Score = 47 (21.6 bits), Expect = 1.8e-43, Sum P(5) = 1.8e-43
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 148 NLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPP 187
+L+PP+ L PP G+ GG SS + PLPP
Sbjct: 211 SLHPPAELWSPPGQAGFGPMLGGA--SSPL------PLPP 242
Score = 46 (21.3 bits), Expect = 1.8e-43, Sum P(5) = 1.8e-43
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 303 EGMEECLDDAINVIRNHA------DGQ-LNLPGLSHPSPG--GSL-LYHQHL 344
E ME+ LD+AI+V+ A G+ L G H G GS L H H+
Sbjct: 383 EQMEDHLDEAIHVLAGFAGPVMPLSGRHAGLVGAGHSEDGLSGSSGLMHNHV 434
Score = 40 (19.1 bits), Expect = 2.2e-33, Sum P(3) = 2.2e-33
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 136 EHAISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPA 195
E +S S+ L N L PP++ G S P + S+T ++ + P
Sbjct: 420 EDGLSGSSGLMHNHVALPDLSRPPDSYGGKSQRHSPGRVAWPLSVTLPQSHVITLMPQPG 479
Query: 196 AASGVQSPSL 205
+ G +P L
Sbjct: 480 NSKG--APEL 487
Score = 40 (19.1 bits), Expect = 0.00098, Sum P(4) = 0.00098
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 431 EDSEDPQTKAMR-EKERRQANNVRERIRIR 459
E+ ED + A E+E+++ R R R R
Sbjct: 512 EEQEDEENLAAEHEEEKKEPKAPRARTRCR 541
Score = 39 (18.8 bits), Expect = 1.8e-43, Sum P(5) = 1.8e-43
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 78 DEFGQASSPRFVSHKPNPSSIYTDPYYI 105
D++ + ++ + S K PSS Y P+Y+
Sbjct: 182 DDYSR-NTAAYPSTK-TPSSAYPTPFYM 207
>ZFIN|ZDB-GENE-990415-51 [details] [associations]
symbol:tcf3 "transcription factor 3" species:7955
"Danio rerio" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0055002 "striated muscle cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-990415-51 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG003854 HOGENOM:HOG000234180
GO:GO:0055002 CTD:6929 EMBL:X76997 IPI:IPI00500781 PIR:I50518
RefSeq:NP_571169.1 UniGene:Dr.20061 ProteinModelPortal:Q90491
STRING:Q90491 PRIDE:Q90491 GeneID:30310 KEGG:dre:30310
InParanoid:Q90491 NextBio:20806750 ArrayExpress:Q90491 Bgee:Q90491
Uniprot:Q90491
Length = 583
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 146/401 (36%), Positives = 194/401 (48%)
Query: 143 NHLSQNLYPP--STLHLP--PENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAAS 198
+H Q+ YPP S P P+ + +SP P S ++ LP S+ + A
Sbjct: 187 DHWGQSGYPPVMSNFINPQKPQPLP-VSPQNYPLHGSEVN------LP--SSFHSVPAGY 237
Query: 199 GVQSPSLYPGHNSPIVQTTGPGPGDT---VGKALASIYPADQXXXXXXXXXXXXXXXXXX 255
GV + + + I+ G G + +GKALASIYP+D
Sbjct: 238 GVPNHTPPISSSEGIMGNRGANAGSSGAEIGKALASIYPSDNNGSNFSSTPSTPVGSPSN 297
Query: 256 XXAQNSEWVSGPH--ASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSH-TEG--MEECLD 310
A S+W G A SP F + GL S + RL EA+ LR+H G M+ L
Sbjct: 298 VAASASQWPKGSSQPAPSPGFEA---GLAQSKLDD-RLGEALHVLRNHHAVGTDMQSLLS 353
Query: 311 DAINVIRNHADGQLNLP------GLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAG 364
AI+ H+ G L GL++ PG L H ++ + + + + +
Sbjct: 354 AAIS---GHSAGAAALGSLRQAFGLANRLPG---LMSNHSEDAAGLPQSSALLQGHHTSH 407
Query: 365 LAS-SSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRSR 423
SS +D + ++A SS D K E D+ G R+R
Sbjct: 408 QPPPSSQSDTFTSL-SLARSSHASSS---DIKREDKDDDENLSIADKSEDEKKDGKSRTR 463
Query: 424 R-YCSSADEDSED-P-QTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDK 480
DED ED P + KA RE+ERR ANN RER+R+RDINEA KELGRMC HL +K
Sbjct: 464 TSQDEDEDEDDEDLPVEVKAERERERRMANNARERLRVRDINEAFKELGRMCQLHLSNEK 523
Query: 481 PQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEK 521
PQTKL IL+ AV VI++LEQQVRERNLNPKAACL+RREEEK
Sbjct: 524 PQTKLLILHQAVNVILNLEQQVRERNLNPKAACLKRREEEK 564
>UNIPROTKB|E2R6H8 [details] [associations]
symbol:TCF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
Ensembl:ENSCAFT00000030997 Uniprot:E2R6H8
Length = 651
Score = 413 (150.4 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 144/387 (37%), Positives = 186/387 (48%)
Query: 185 LPPMSTIRN-PAAASGVQSPSLYPGHNSPIVQ----TTGPGPGDTVGKALASIYPADQXX 239
LP +ST + PAAA S P + + TT GD +GKALASIY D
Sbjct: 286 LPAVSTFSSGPAAAYASVSSHTPPVSGADGLMGSRGTTAGSSGDALGKALASIYSPDHSS 345
Query: 240 XXXXXXXXXXXXXXXXXXAQNSEWV--SGPHASSPHFTSDHRGLH-MSIPEQQRLDEAIG 296
A S+W P A SP + GLH + + LDEAI
Sbjct: 346 NNFSSSPSTPVGSPQGL-AGTSQWPRPGAPGALSPSYDG---GLHSLQTKMEDHLDEAIH 401
Query: 297 YLRSHTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGG--SLLYHQH----LGNSHAV 350
LRSH G D ++ H + G P G L+ H L S +
Sbjct: 402 VLRSHAVGAAA---DVHGLLPGHGALAPSFTGPVLPLAGRHTGLVGGGHSDDALSASGLL 458
Query: 351 SSTVGAIPA--GYLAGLASSSDT-DGHIKIENIANSSKKRKELTIDTKTESICSDQMXXX 407
+ VG +P+ G L L D+ G + ++ +S+ +E +D S+ +
Sbjct: 459 HNHVG-LPSQPGALPDLTRPPDSYSGLGRAGAVSGASEINREEKVDEVNGSVAESEEEMM 517
Query: 408 XXXXXXXXXKGSKRSRRYCSSADEDSED---PQTKAMREKERRQANNVRERIRIRDINEA 464
R+R SS DED +D P+ KA REKERR ANN RER+R+RDINE
Sbjct: 518 DLK--------PPRTR---SSPDEDEDDLLPPEQKAEREKERRVANNARERLRVRDINE- 565
Query: 465 LKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAED 524
KELGR HL ++KPQTKL IL+ AV VI++LEQQVRERNLNPKAACL+RREEEK
Sbjct: 566 FKELGRGGQLHLNSEKPQTKLLILHQAVSVILNLEQQVRERNLNPKAACLKRREEEKVSG 625
Query: 525 SVG-PKLGHHLSAVSQHMGIQPPSFPS 550
VG P++ LSA H G+ P+
Sbjct: 626 VVGDPQMV--LSAA--HPGLSEAHNPA 648
Score = 49 (22.3 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 22 SNSYANNNTDSFSPDSPYFPFIMPPGRTVPPASIKRKRESIEPP-ENSDVDGAHGWYDEF 80
S+ Y +++ D + D+ +P PG P S+ P E G G+
Sbjct: 181 SSVYPSSSGDDYGRDTAAYPSAKTPGSAYP-TPFYMADGSLHPSAELWSPSGQAGFGPML 239
Query: 81 GQASSP 86
G SSP
Sbjct: 240 GGGSSP 245
Score = 37 (18.1 bits), Expect = 6.2e-40, Sum P(2) = 6.2e-40
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 8 KYNGAADMDNGMSYSNSYANNNTDSFSPDSPY 39
++ G+ D S S + N+ SF P Y
Sbjct: 44 QFGGSGLEDRPSSGSWGAGDQNSSSFDPSRTY 75
>UNIPROTKB|F1M2Q2 [details] [associations]
symbol:Tcf12 "Transcription factor 12" species:10116
"Rattus norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:3829 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00510000046438 IPI:IPI01016286
Ensembl:ENSRNOT00000035883 ArrayExpress:F1M2Q2 Uniprot:F1M2Q2
Length = 633
Score = 402 (146.6 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 125/308 (40%), Positives = 156/308 (50%)
Query: 266 GPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLN 325
G SSP + + L RLD+AI LR+H G L + + I + N
Sbjct: 333 GQAPSSPSYENSLHSLSRMEDRLDRLDDAIHVLRNHAVGPSTSLPTSHSDIHSLLGPSHN 392
Query: 326 LP-GLSHPSPGGSLLY-----------HQH----LGNSHAV-SSTVGA--------IPAG 360
P G + + GGS L H+ L +H+V SSTV A P
Sbjct: 393 APIGNLNSNYGGSSLVTNSRSASMVGTHREDSVSLNGNHSVLSSTVAASNTELNHKTPES 452
Query: 361 YLAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSK 420
+ G+ + S G + I +K++ E E SD M K S
Sbjct: 453 FRGGVQNQS---GSVVPTEIKTENKEKDE----NLHEPPSSDDMKSDDESSQKDI-KVSS 504
Query: 421 RSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDK 480
R R ++ DED +P+ K REKERR ANN RER+R+RDINEA KELGRMC HLK++K
Sbjct: 505 RGRTSSTNEDEDL-NPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEK 563
Query: 481 PQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAED-SVGPKL---GHH--L 534
PQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK S P G H L
Sbjct: 564 PQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAASAEPPTTLPGTHPGL 623
Query: 535 SAVSQHMG 542
S + MG
Sbjct: 624 SETTNPMG 631
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 89/352 (25%), Positives = 133/352 (37%)
Query: 30 TDSFSPDSPYFPFIMPPGRTVP--------PASIKRKRESIEPPENSDVDGAHGWYDEFG 81
+ S P +PY+ F R P P K+ R+ + P S V D+F
Sbjct: 98 SSSGKPGTPYYSFSATSSRRRPLHDSVALDPLQAKKVRK-VPPGLPSSVYAPSPNSDDFN 156
Query: 82 QASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAIST 141
+ SP + S KP P+S++ +++ + + H +
Sbjct: 157 R-ESPSYPSPKP-PTSMFASTFFMQDGTHSSSDLWSSSNGMSQPGFGGILGTSTSHMSQS 214
Query: 142 SNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQ 201
S++ S L+ L PP ++ P D I S LPPMS+ + +S
Sbjct: 215 SSYGS--LHSHDRLSYPPHSVS-------PTD------INTS-LPPMSSFHRGSTSS--- 255
Query: 202 SPSLYPGHNSPI------VQTTGPGPG-----DTVGKALASIYPADQXXXXXXXXXXXXX 250
SP + H PI + T G G D +GKALASIY D
Sbjct: 256 SPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPV 315
Query: 251 XXXXXXXAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEEC 308
A S+W G SSP + + L RLD+AI LR+H G
Sbjct: 316 GSPSPLTAGTSQWPRAGGQAPSSPSYENSLHSLSRMEDRLDRLDDAIHVLRNHAVGPSTS 375
Query: 309 LDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAG 360
L + H+D +L G SH +P G+L + + G S V+++ A G
Sbjct: 376 LPTS------HSDIH-SLLGPSHNAPIGNL--NSNYGGSSLVTNSRSASMVG 418
Score = 51 (23.0 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPP 46
S+ YA + N+D F+ +SP +P PP
Sbjct: 143 SSVYAPSPNSDDFNRESPSYPSPKPP 168
>ZFIN|ZDB-GENE-051113-64 [details] [associations]
symbol:zgc:113045 "zgc:113045" species:7955 "Danio
rerio" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-051113-64 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG282899 GeneTree:ENSGT00510000046438 HOVERGEN:HBG003854
HOGENOM:HOG000234180 KO:K09063 OrthoDB:EOG4HX50S OMA:AYPAPFY
EMBL:CABZ01011095 EMBL:BC160651 IPI:IPI00866060
RefSeq:NP_001166154.1 UniGene:Dr.41669 Ensembl:ENSDART00000074228
Ensembl:ENSDART00000130136 GeneID:664768 KEGG:dre:664768
NextBio:20902345 Uniprot:B1H1L4
Length = 652
Score = 355 (130.0 bits), Expect = 6.4e-40, Sum P(2) = 6.4e-40
Identities = 72/100 (72%), Positives = 80/100 (80%)
Query: 430 DEDSED-P-QTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGI 487
D+D ED P + K REKERR ANN RER+R+RDINEA KELGRMC HL DKPQTKL I
Sbjct: 529 DDDDEDLPAEVKVEREKERRVANNARERLRVRDINEAFKELGRMCQLHLSNDKPQTKLLI 588
Query: 488 LNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVG 527
L+ AV VI++LEQQVRERNLNPKAACL+RREEEK VG
Sbjct: 589 LHQAVNVILNLEQQVRERNLNPKAACLKRREEEKVSGVVG 628
Score = 127 (49.8 bits), Expect = 6.4e-40, Sum P(2) = 6.4e-40
Identities = 59/212 (27%), Positives = 84/212 (39%)
Query: 142 SNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITA-SPLPPMSTIRNP---AAA 197
S ++ + L+ S P ++G + A+S +I+ + S + P + P A
Sbjct: 198 SFYMQEGLHSSSDPWAPSGSLGQSGYTAMLANSPHINQPASFSAINPQDRMNYPLHGADV 257
Query: 198 SGVQSPSLYPGHNSPIVQ---------TTGPGPGDTVGKALASIYPADQXXXXXXXXXXX 248
+G S S H S I T GD +GKALASIYP+D
Sbjct: 258 NGFHSGSAAYSHTSSINGSDSILASRGTVASSSGDEIGKALASIYPSDHNSNNFSSTPST 317
Query: 249 XXXXXXXXXAQNSEW--VSGPHASSPHFTSDHRGLH-MSIPEQQRLDEAIGYLRSHTEGM 305
++W SG A SP++ GLH + + RL+EAI LRSH G
Sbjct: 318 PVGSPQGIATGATQWSRASGQAALSPNYEG---GLHALQNKMEDRLEEAIHVLRSHAVGQ 374
Query: 306 EECLDDAINVIRNHAD--GQLNLPGLSHPSPG 335
+ A HAD G L+ S S G
Sbjct: 375 APGIPGA------HADMHGLLSAVSTSSASMG 400
Score = 93 (37.8 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 60/235 (25%), Positives = 92/235 (39%)
Query: 148 NLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGV--QSPSL 205
++YP S ++ E + S P+ S S TA L I PA+ S + Q
Sbjct: 193 SVYPGS-FYMQ-EGLHSSSDPWAPSGSLGQSGYTAM-LANSPHINQPASFSAINPQDRMN 249
Query: 206 YPGHNSPIVQTTGPGPGDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQ--NSEW 263
YP H + + G G +SI +D A S+
Sbjct: 250 YPLHGADV---NGFHSGSAAYSHTSSINGSDSILASRGTVASSSGDEIGKALASIYPSDH 306
Query: 264 VSGPHASSPHF-TSDHRGLHMSIPEQQRLD--EAI-----GYLRSHTEGMEECLDDAINV 315
S +S+P +G+ + R A+ G L + ME+ L++AI+V
Sbjct: 307 NSNNFSSTPSTPVGSPQGIATGATQWSRASGQAALSPNYEGGLHALQNKMEDRLEEAIHV 366
Query: 316 IRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYL-AGLASSS 369
+R+HA GQ PG+ PG H L S+++G+IP Y AGL S+
Sbjct: 367 LRSHAVGQA--PGI----PGAHADMHGLLSAVSTSSASMGSIPQAYSNAGLPLSN 415
Score = 48 (22.0 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 185 LPPMSTIRNPAAASGVQSPSLYP 207
LPP ST+ A ASG P P
Sbjct: 431 LPPSSTLLQSAHASGTPQPGGAP 453
Score = 42 (19.8 bits), Expect = 5.2e-31, Sum P(2) = 5.2e-31
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 138 AISTSNHLSQNLYPPS-TLHLPPENMGYMSPSGGPADSSNISSI 180
A++ S+H PPS TL G P G P ++ N S +
Sbjct: 419 AMAGSHHDDHACLPPSSTLLQSAHASGTPQPGGAP-EAFNTSGL 461
Score = 42 (19.8 bits), Expect = 5.2e-31, Sum P(2) = 5.2e-31
Identities = 24/80 (30%), Positives = 31/80 (38%)
Query: 138 AISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMST------- 190
A+S S S + + PS + P PS G D I P P S
Sbjct: 123 AMSPSGLKSGSQFYPSYANNPRRR-----PSDGGMDPQPQKKIRKPPGLPSSVYAATSGD 177
Query: 191 --IRNPAAASGVQSPSLYPG 208
IR+ AA G + S+YPG
Sbjct: 178 DYIRDSAAYPGSKPGSVYPG 197
Score = 38 (18.4 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 431 EDSEDPQTKAMREKERRQANNVRERIRIR 459
E+ ED + ++ +K + + R R R
Sbjct: 480 EEKEDDENSSVADKSEEEKKESKPRTRPR 508
>UNIPROTKB|F5GY10 [details] [associations]
symbol:TCF12 "Transcription factor 12" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC010999 EMBL:AC016525
EMBL:AC090511 EMBL:AC090532 HGNC:HGNC:11623 ChiTaRS:TCF12
IPI:IPI01009406 ProteinModelPortal:F5GY10 SMR:F5GY10
Ensembl:ENST00000543579 UCSC:uc010bft.3 ArrayExpress:F5GY10
Bgee:F5GY10 Uniprot:F5GY10
Length = 536
Score = 392 (143.0 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 114/275 (41%), Positives = 146/275 (53%)
Query: 290 RLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLP-GLSHPSPGGSLLYHQHLGNSH 348
RLD+AI LR+H G L + I + N P G + + GGS L S
Sbjct: 260 RLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASM 319
Query: 349 AVSSTVGAIPAG----YLAGLASSSDTD-GHIKIENIANS--SKKRKELTIDTKTESICS 401
+ ++ L+ ++S TD H EN S+ +T + KTE+
Sbjct: 320 VGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEK 379
Query: 402 DQMXXX--XXXXXXXXXKGSKR-----SRRYCSSADEDSE-DPQTKAMREKERRQANNVR 453
D+ + S++ SR SS +ED + +P+ K REKERR ANN R
Sbjct: 380 DENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNAR 439
Query: 454 ERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAAC 513
ER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAAC
Sbjct: 440 ERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAAC 499
Query: 514 LRRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
L+RREEEK S P G H LS + MG
Sbjct: 500 LKRREEEKVSAVSAEPPTTLPGTHPGLSETTNPMG 534
Score = 171 (65.3 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 83/310 (26%), Positives = 129/310 (41%)
Query: 78 DEFGQASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEH 137
D+F + SP + S KP P+S++ +++ + + H
Sbjct: 32 DDFNR-ESPSYPSPKP-PTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSH 89
Query: 138 AISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTI-RNPAA 196
+S++ NL+ L PP ++ P D I S LPPMS+ R +
Sbjct: 90 MSQSSSY--GNLHSHDRLSYPPHSVS-------PTD------INTS-LPPMSSFHRGSTS 133
Query: 197 ASGVQSPSLYPGHNSP--IVQTTGPGPG-----DTVGKALASIYPADQXXXXXXXXXXXX 249
+S + S P N I+ T G G D +GKALASIY D
Sbjct: 134 SSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTP 193
Query: 250 XXXXXXXXAQNSEWV--SGPHASSPHFTSDHRGLHMSIPEQ--QRLDEAIGYLR-----S 300
S+W G SSP + + L + +Q + L +A+ +L+ S
Sbjct: 194 VGSPSPLTG-TSQWPRPGGQAPSSPSYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQS 252
Query: 301 HTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAG 360
E + LDDAI+V+RNHA G P S P+ G S + H LG SH ++ +G++ +
Sbjct: 253 RMEDRLDRLDDAIHVLRNHAVG----PSTSLPA-GHSDI-HSLLGPSH--NAPIGSLNSN 304
Query: 361 YL-AGLASSS 369
Y + L +SS
Sbjct: 305 YGGSSLVASS 314
Score = 49 (22.3 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 19 MSYSNS---YANN-NTDSFSPDSPYFPFIMPP 46
M Y N YA + N+D F+ +SP +P PP
Sbjct: 16 MYYYNGKTVYAPSPNSDDFNRESPSYPSPKPP 47
>UNIPROTKB|E9PT88 [details] [associations]
symbol:Tcf12 "Transcription factor 12" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0070888 "E-box binding" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 RGD:3829
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00510000046438
IPI:IPI00387871 Ensembl:ENSRNOT00000023634 ArrayExpress:E9PT88
Uniprot:E9PT88
Length = 537
Score = 391 (142.7 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 120/284 (42%), Positives = 149/284 (52%)
Query: 290 RLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLP-GLSHPSPGGSLLY-------- 340
RLD+AI LR+H G L + + I + N P G + + GGS L
Sbjct: 261 RLDDAIHVLRNHAVGPSTSLPTSHSDIHSLLGPSHNAPIGNLNSNYGGSSLVTNSRSASM 320
Query: 341 ---HQH----LGNSHAV-SSTVGA--------IPAGYLAGLASSSDTDGHIKIENIANSS 384
H+ L +H+V SSTV A P + G+ + S G + I +
Sbjct: 321 VGTHREDSVSLNGNHSVLSSTVAASNTELNHKTPESFRGGVQNQS---GSVVPTEIKTEN 377
Query: 385 KKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRSRRYCSSADEDSEDPQTKAMREK 444
K++ E E SD M K S R R ++ DED +P+ K REK
Sbjct: 378 KEKDE----NLHEPPSSDDMKSDDESSQKDI-KVSSRGRTSSTNEDEDL-NPEQKIEREK 431
Query: 445 ERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRE 504
ERR ANN RER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRE
Sbjct: 432 ERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRE 491
Query: 505 RNLNPKAACLRRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
RNLNPKAACL+RREEEK S P G H LS + MG
Sbjct: 492 RNLNPKAACLKRREEEKVSAASAEPPTTLPGTHPGLSETTNPMG 535
Score = 173 (66.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 75/295 (25%), Positives = 121/295 (41%)
Query: 78 DEFGQASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEH 137
D+F + SP + S KP P+S++ +++ + + H
Sbjct: 32 DDFNR-ESPSYPSPKP-PTSMFASTFFMQDGTHSSSDLWSSSNGMSQPGFGGILGTSTSH 89
Query: 138 AISTSNHLSQNLYPPSTLHLPPENMGY--MSPSGGPADSSNISSITASPLPPMSTIRNPA 195
+S++ S L+ L PP ++ ++ S P S + S ++SP S P
Sbjct: 90 MSQSSSYGS--LHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAAS--HTPP 145
Query: 196 AASGVQSPSLYPGHNSPIVQTTGPGPGDTVGKALASIYPADQXXXXXXXXXXXXXXXXXX 255
+G S G+ + QT GD +GKALASIY D
Sbjct: 146 I-NGSDSILGTRGNAAGSSQT-----GDALGKALASIYSPDHTSSSFPSNPSTPVGSPSP 199
Query: 256 XXAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQ--QRLDEAIGYLR-----SHTEGME 306
A S+W G SSP + + L + +Q + L +A+ +L+ S E
Sbjct: 200 LTAGTSQWPRAGGQAPSSPSYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQSRMEDRL 259
Query: 307 ECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGY 361
+ LDDAI+V+RNHA G P S P+ + H LG SH ++ +G + + Y
Sbjct: 260 DRLDDAIHVLRNHAVG----PSTSLPTSHSDI--HSLLGPSH--NAPIGNLNSNY 306
Score = 49 (22.3 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 19 MSYSNS---YANN-NTDSFSPDSPYFPFIMPP 46
M Y N YA + N+D F+ +SP +P PP
Sbjct: 16 MYYYNGKTVYAPSPNSDDFNRESPSYPSPKPP 47
>UNIPROTKB|F1NKB8 [details] [associations]
symbol:TCF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00510000046438
EMBL:AADN02066701 EMBL:AADN02066702 EMBL:AADN02066703
EMBL:AADN02066704 EMBL:AADN02066705 EMBL:AADN02066706
EMBL:AADN02066707 EMBL:AADN02066708 EMBL:AADN02066709
EMBL:AADN02066710 EMBL:AADN02066711 IPI:IPI01017296
Ensembl:ENSGALT00000041180 ArrayExpress:F1NKB8 Uniprot:F1NKB8
Length = 665
Score = 423 (154.0 bits), Expect = 3.0e-39, P = 3.0e-39
Identities = 164/530 (30%), Positives = 230/530 (43%)
Query: 37 SPYFPFIMPPGRTVPPASIK----RKRESIEPPENSDVDGAHGWYDEFGQASSPRFVSHK 92
S YF + P R +SI +K + P S V+ A D++ + + + K
Sbjct: 154 SQYFSYPNNPRRRGAESSIADGQPKKVRKVPPALPSSVNPAQSC-DDYSRDPAG-YTPSK 211
Query: 93 PNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAISTSNHLSQNLYPP 152
P PS++Y +Y+ + + S+S+ L Q+
Sbjct: 212 P-PSTVYPGAFYMADGLHNSPDLWSSPGAMSQSSYGAMLG-------SSSSPLPQSA-SF 262
Query: 153 STLHLPPENMGYMSPSGG-PADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNS 211
++LH E M Y SG ++S +++ P + P SG + G+
Sbjct: 263 NSLH-QHERMNYQLHSGELNGGLPSVSGFSSASTPYGVSSHTPPI-SGTDTMM---GNRG 317
Query: 212 PIVQTTGPGPGDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEW--VSGPHA 269
TT GD +GKALASIY D A S+W G A
Sbjct: 318 ----TTAGSSGDALGKALASIYSPDHSSNNFSSNPSTPVGSPQGL-AGTSQWSRAGGQGA 372
Query: 270 SSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECLD----DAINVIRNHADGQLN 325
SP + L + + RLDEAI LR+H G + D ++ +
Sbjct: 373 LSPSYEGSLHTLQNKM--EDRLDEAIHVLRNHAVGQTAAMPSNHGDMHGLLGSAPAHSAA 430
Query: 326 LPGLSHPSPGGSL-LYHQH---LGNSH---AVSSTVGAIPAGYLAGLASSSDTDGHIKIE 378
+ L P + L +H +G H +SST + SS D + + +
Sbjct: 431 VGSLGQAFPASVMSLGGRHPSLVGGGHPEDGLSSTPSMLHNHVTLPSQPSSLPDLNRQQD 490
Query: 379 NIANSSKKRKELTIDTKTESIC----SDQMXXXXXXXXXXXXKGSKRSRRYCSSADEDSE 434
+ S ++ + T I D+ K K SR SS DE +
Sbjct: 491 TYSGLSGGLGRSSVSSGTNEIKREEKEDEENTSVADNSEEEKKELKPSRNRTSSTDE-AL 549
Query: 435 DPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEV 494
+ K +R++ERR ANN RER+R+RDINEA KELGRMC HLKTDK QTKL IL AV+V
Sbjct: 550 SLEDKDLRDRERRMANNARERVRVRDINEAFKELGRMCQMHLKTDKAQTKLIILQQAVQV 609
Query: 495 IMSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLGHHLSAVSQHMGI 543
I+ LEQQVRERNLNPKAACL+RREEEK VG P++ LSA H G+
Sbjct: 610 ILGLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMT--LSA--SHPGL 655
>UNIPROTKB|F1NKB5 [details] [associations]
symbol:TCF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00510000046438
EMBL:AADN02066701 EMBL:AADN02066702 EMBL:AADN02066703
EMBL:AADN02066704 EMBL:AADN02066705 EMBL:AADN02066706
EMBL:AADN02066707 EMBL:AADN02066708 EMBL:AADN02066709
EMBL:AADN02066710 EMBL:AADN02066711 IPI:IPI00818158
Ensembl:ENSGALT00000041184 ArrayExpress:F1NKB5 Uniprot:F1NKB5
Length = 588
Score = 355 (130.0 bits), Expect = 5.3e-39, Sum P(3) = 5.3e-39
Identities = 77/118 (65%), Positives = 90/118 (76%)
Query: 431 EDSED----PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLG 486
ED ED P+ KA RE+ERR ANN RER+R+RDINEA KELGRMC HL ++KPQTKL
Sbjct: 465 EDEEDDLLPPEQKAERERERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQTKLL 524
Query: 487 ILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLGHHLSAVSQHMGI 543
IL+ AV VI++LEQQVRERNLNPKAACL+RREEEK VG P++ LSA H G+
Sbjct: 525 ILHQAVSVILNLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMT--LSA--SHPGL 578
Score = 104 (41.7 bits), Expect = 5.3e-39, Sum P(3) = 5.3e-39
Identities = 48/162 (29%), Positives = 64/162 (39%)
Query: 185 LPPMSTIRNPAAASGVQS--PSLYPGHNSPIVQ--TTGPGPGDTVGKALASIYPADQXXX 240
LP +S + + GV S P + G ++ + TT GD +GKALASIY D
Sbjct: 155 LPSVSGFSSASTPYGVSSHTPPI-SGTDTMMGNRGTTAGSSGDALGKALASIYSPDHSSN 213
Query: 241 XXXXXXXXXXXXXXXXXAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYL 298
A S+W G A SP + L + + RLDEAI L
Sbjct: 214 NFSSNPSTPVGSPQGL-AGTSQWSRAGGQGALSPSYEGSLHTLQNKM--EDRLDEAIHVL 270
Query: 299 RSHTEGMEECLDDAINVIRNHAD--GQLNLPGLSHPSPGGSL 338
R+H G + NH D G L +H + GSL
Sbjct: 271 RNHAVGQTAAMPS------NHGDMHGLLG-SAPAHSAAVGSL 305
Score = 39 (18.8 bits), Expect = 5.3e-39, Sum P(3) = 5.3e-39
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 22 SNSYANNNTDSFSPDSPYFPFIMPPGRTVPPA 53
S+ ++N+ D +S D + PP P A
Sbjct: 60 SSXVSSNSGDDYSRDPAGYTPSKPPSTVYPGA 91
>UNIPROTKB|F1LNC2 [details] [associations]
symbol:Tcf12 "Transcription factor 12" species:10116
"Rattus norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:3829 GO:GO:0045893 GO:GO:0003700 GO:GO:0005667
GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0070888
IPI:IPI00203189 Ensembl:ENSRNOT00000064413 ArrayExpress:F1LNC2
Uniprot:F1LNC2
Length = 659
Score = 391 (142.7 bits), Expect = 8.4e-39, Sum P(2) = 8.4e-39
Identities = 120/284 (42%), Positives = 149/284 (52%)
Query: 290 RLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLP-GLSHPSPGGSLLY-------- 340
RLD+AI LR+H G L + + I + N P G + + GGS L
Sbjct: 383 RLDDAIHVLRNHAVGPSTSLPTSHSDIHSLLGPSHNAPIGNLNSNYGGSSLVTNSRSASM 442
Query: 341 ---HQH----LGNSHAV-SSTVGA--------IPAGYLAGLASSSDTDGHIKIENIANSS 384
H+ L +H+V SSTV A P + G+ + S G + I +
Sbjct: 443 VGTHREDSVSLNGNHSVLSSTVAASNTELNHKTPESFRGGVQNQS---GSVVPTEIKTEN 499
Query: 385 KKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRSRRYCSSADEDSEDPQTKAMREK 444
K++ E E SD M K S R R ++ DED +P+ K REK
Sbjct: 500 KEKDE----NLHEPPSSDDMKSDDESSQKDI-KVSSRGRTSSTNEDEDL-NPEQKIEREK 553
Query: 445 ERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRE 504
ERR ANN RER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRE
Sbjct: 554 ERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRE 613
Query: 505 RNLNPKAACLRRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
RNLNPKAACL+RREEEK S P G H LS + MG
Sbjct: 614 RNLNPKAACLKRREEEKVSAASAEPPTTLPGTHPGLSETTNPMG 657
Score = 188 (71.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 88/351 (25%), Positives = 140/351 (39%)
Query: 30 TDSFSPDSPYFPFIMPPGRTVP--------PASIKRKRESIEPPENSDVDGAHGWYDEFG 81
+ S P +PY+ F R P P K+ R+ + P S V D+F
Sbjct: 99 SSSGKPGTPYYSFSATSSRRRPLHDSVALDPLQAKKVRK-VPPGLPSSVYAPSPNSDDFN 157
Query: 82 QASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAIST 141
+ SP + S KP P+S++ +++ + + H +
Sbjct: 158 R-ESPSYPSPKP-PTSMFASTFFMQDGTHSSSDLWSSSNGMSQPGFGGILGTSTSHMSQS 215
Query: 142 SNHLSQNLYPPSTLHLPPENMGY--MSPSGGPADSSNISSITASPLPPMSTIRNPAAASG 199
S++ S L+ L PP ++ ++ S P S + S ++SP S P +G
Sbjct: 216 SSYGS--LHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAAS--HTPPI-NG 270
Query: 200 VQSPSLYPGHNSPIVQTTGPGPGDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQ 259
S G+ + QT GD +GKALASIY D A
Sbjct: 271 SDSILGTRGNAAGSSQT-----GDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTAG 325
Query: 260 NSEW--VSGPHASSPHFTSDHRGLHMSIPEQ--QRLDEAIGYLR-----SHTEGMEECLD 310
S+W G SSP + + L + +Q + L +A+ +L+ S E + LD
Sbjct: 326 TSQWPRAGGQAPSSPSYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQSRMEDRLDRLD 385
Query: 311 DAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGY 361
DAI+V+RNHA G P S P+ + H LG SH ++ +G + + Y
Sbjct: 386 DAIHVLRNHAVG----PSTSLPTSHSDI--HSLLGPSH--NAPIGNLNSNY 428
Score = 51 (23.0 bits), Expect = 8.4e-39, Sum P(2) = 8.4e-39
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPP 46
S+ YA + N+D F+ +SP +P PP
Sbjct: 144 SSVYAPSPNSDDFNRESPSYPSPKPP 169
>UNIPROTKB|Q99081 [details] [associations]
symbol:TCF12 "Transcription factor 12" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0070888 "E-box
binding" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006955 "immune
response" evidence=TAS] [GO:0007517 "muscle organ development"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Reactome:REACT_111045 GO:GO:0045893
GO:GO:0006955 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
GO:GO:0005667 GO:GO:0007517 GO:GO:0045666 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CH471082 GO:GO:0070888 eggNOG:NOG282899
KO:K15603 CTD:6938 HOVERGEN:HBG003854 EMBL:M83233 EMBL:M80627
EMBL:AL831981 EMBL:BX537967 EMBL:AC010999 EMBL:AC016525
EMBL:AC090511 EMBL:AC090532 EMBL:BC050556 EMBL:M65209 EMBL:BK001049
IPI:IPI00012966 IPI:IPI00384333 IPI:IPI00384979 PIR:A42121
RefSeq:NP_003196.1 RefSeq:NP_996919.1 RefSeq:NP_996920.1
RefSeq:NP_996921.1 RefSeq:NP_996923.1 UniGene:Hs.511504 PDB:2KNH
PDBsum:2KNH ProteinModelPortal:Q99081 SMR:Q99081 DIP:DIP-29403N
IntAct:Q99081 MINT:MINT-1425247 STRING:Q99081 DMDM:1708332
PRIDE:Q99081 DNASU:6938 Ensembl:ENST00000267811
Ensembl:ENST00000333725 Ensembl:ENST00000343827
Ensembl:ENST00000438423 Ensembl:ENST00000557843 GeneID:6938
KEGG:hsa:6938 UCSC:uc002aea.3 UCSC:uc002aec.3 UCSC:uc002aee.3
GeneCards:GC15P057210 HGNC:HGNC:11623 HPA:CAB004432 HPA:HPA002103
MIM:600480 neXtProt:NX_Q99081 PharmGKB:PA36381 HOGENOM:HOG000234180
OMA:TSSTNED OrthoDB:EOG4K3KVX ChiTaRS:TCF12
EvolutionaryTrace:Q99081 GenomeRNAi:6938 NextBio:27145
ArrayExpress:Q99081 Bgee:Q99081 CleanEx:HS_TCF12
Genevestigator:Q99081 GermOnline:ENSG00000140262 Uniprot:Q99081
Length = 682
Score = 392 (143.0 bits), Expect = 9.0e-39, Sum P(2) = 9.0e-39
Identities = 114/275 (41%), Positives = 146/275 (53%)
Query: 290 RLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLP-GLSHPSPGGSLLYHQHLGNSH 348
RLD+AI LR+H G L + I + N P G + + GGS L S
Sbjct: 406 RLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASM 465
Query: 349 AVSSTVGAIPAG----YLAGLASSSDTD-GHIKIENIANS--SKKRKELTIDTKTESICS 401
+ ++ L+ ++S TD H EN S+ +T + KTE+
Sbjct: 466 VGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEK 525
Query: 402 DQMXXX--XXXXXXXXXKGSKR-----SRRYCSSADEDSE-DPQTKAMREKERRQANNVR 453
D+ + S++ SR SS +ED + +P+ K REKERR ANN R
Sbjct: 526 DENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNAR 585
Query: 454 ERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAAC 513
ER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAAC
Sbjct: 586 ERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAAC 645
Query: 514 LRRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
L+RREEEK S P G H LS + MG
Sbjct: 646 LKRREEEKVSAVSAEPPTTLPGTHPGLSETTNPMG 680
Score = 131 (51.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 73/250 (29%), Positives = 106/250 (42%)
Query: 140 STSNHLSQ----NLYPPSTLHLPPE----NMGYMSPSGGPADSSNISSITASPLPPMSTI 191
S+SN +SQ + ST H+ N+ P S + + I S LPPMS+
Sbjct: 239 SSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTS-LPPMSSF 297
Query: 192 RNPAAASGVQSPSLYPGHNSPI------VQTTGPGPG-----DTVGKALASIYPADQXXX 240
+ +S SP + H PI + T G G D +GKALASIY D
Sbjct: 298 HRGSTSS---SPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSS 354
Query: 241 XXXXXXXXXXXXXXXXXAQNSEWVSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRS 300
S+W P +P S LH S+ Q R+++ +
Sbjct: 355 SFPSNPSTPVGSPSPLTG-TSQWPR-PGGQAPSSPSYENSLH-SL--QSRMEDRL----- 404
Query: 301 HTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAG 360
+ LDDAI+V+RNHA G P S P+ G S + H LG SH ++ +G++ +
Sbjct: 405 ------DRLDDAIHVLRNHAVG----PSTSLPA-GHSDI-HSLLGPSH--NAPIGSLNSN 450
Query: 361 YL-AGLASSS 369
Y + L +SS
Sbjct: 451 YGGSSLVASS 460
Score = 51 (23.0 bits), Expect = 9.0e-39, Sum P(2) = 9.0e-39
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPP 46
S+ YA + N+D F+ +SP +P PP
Sbjct: 192 SSVYAPSPNSDDFNRESPSYPSPKPP 217
>UNIPROTKB|E9PGY0 [details] [associations]
symbol:TCF12 "Transcription factor 12" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC010999 EMBL:AC016525
EMBL:AC090511 EMBL:AC090532 HGNC:HGNC:11623 ChiTaRS:TCF12
IPI:IPI00940466 ProteinModelPortal:E9PGY0 SMR:E9PGY0
Ensembl:ENST00000452095 UCSC:uc010ugn.1 ArrayExpress:E9PGY0
Bgee:E9PGY0 Uniprot:E9PGY0
Length = 702
Score = 392 (143.0 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
Identities = 114/275 (41%), Positives = 146/275 (53%)
Query: 290 RLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLP-GLSHPSPGGSLLYHQHLGNSH 348
RLD+AI LR+H G L + I + N P G + + GGS L S
Sbjct: 426 RLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASM 485
Query: 349 AVSSTVGAIPAG----YLAGLASSSDTD-GHIKIENIANS--SKKRKELTIDTKTESICS 401
+ ++ L+ ++S TD H EN S+ +T + KTE+
Sbjct: 486 VGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEK 545
Query: 402 DQMXXX--XXXXXXXXXKGSKR-----SRRYCSSADEDSE-DPQTKAMREKERRQANNVR 453
D+ + S++ SR SS +ED + +P+ K REKERR ANN R
Sbjct: 546 DENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNAR 605
Query: 454 ERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAAC 513
ER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAAC
Sbjct: 606 ERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAAC 665
Query: 514 LRRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
L+RREEEK S P G H LS + MG
Sbjct: 666 LKRREEEKVSAVSAEPPTTLPGTHPGLSETTNPMG 700
Score = 178 (67.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 95/366 (25%), Positives = 147/366 (40%)
Query: 30 TDSFSPDSPYFPFIMPPGRTVP--------PASIKRKRESIEPPENSDVDGAHGWYDEFG 81
+ S P + Y+ F R P P K+ R+ + P S V D+F
Sbjct: 143 SSSGKPGTAYYSFSATSSRRRPLHDSAALDPLQAKKVRK-VPPGLPSSVYAPSPNSDDFN 201
Query: 82 QASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAIST 141
+ SP + S KP P+S++ +++ + + H +
Sbjct: 202 R-ESPSYPSPKP-PTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQS 259
Query: 142 SNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTI-RNPAAASGV 200
S++ NL+ L PP ++ P D I S LPPMS+ R ++S
Sbjct: 260 SSY--GNLHSHDRLSYPPHSVS-------PTD------INTS-LPPMSSFHRGSTSSSPY 303
Query: 201 QSPSLYPGHNSP--IVQTTGPGPG-----DTVGKALASIYPADQXXXXXXXXXXXXXXXX 253
+ S P N I+ T G G D +GKALASIY D
Sbjct: 304 VAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSP 363
Query: 254 XXXXAQNSEWV--SGPHASSPHFTSDHRGLHMSIPEQ--QRLDEAIGYLR-----SHTEG 304
S+W G SSP + + L + +Q + L +A+ +L+ S E
Sbjct: 364 SPLTG-TSQWPRPGGQAPSSPSYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQSRMED 422
Query: 305 MEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYL-A 363
+ LDDAI+V+RNHA G P S P+ G S + H LG SH ++ +G++ + Y +
Sbjct: 423 RLDRLDDAIHVLRNHAVG----PSTSLPA-GHSDI-HSLLGPSH--NAPIGSLNSNYGGS 474
Query: 364 GLASSS 369
L +SS
Sbjct: 475 SLVASS 480
Score = 51 (23.0 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPP 46
S+ YA + N+D F+ +SP +P PP
Sbjct: 188 SSVYAPSPNSDDFNRESPSYPSPKPP 213
>RGD|3829 [details] [associations]
symbol:Tcf12 "transcription factor 12" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=ISO] [GO:0035497 "cAMP
response element binding" evidence=IDA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO;ISS] [GO:0070888 "E-box binding"
evidence=ISO;ISS] [GO:0071837 "HMG box domain binding" evidence=IPI]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:3829 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0046982 GO:GO:0045666
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0070888 GO:GO:0035497
eggNOG:NOG282899 KO:K15603 CTD:6938 HOVERGEN:HBG003854
HOGENOM:HOG000234180 OrthoDB:EOG4K3KVX EMBL:L09656 EMBL:S53913
EMBL:S53920 EMBL:S53922 EMBL:S53921 IPI:IPI00203189 IPI:IPI00231979
IPI:IPI00231980 PIR:A46691 RefSeq:NP_037308.1 UniGene:Rn.9916
ProteinModelPortal:P51514 STRING:P51514 PhosphoSite:P51514
GeneID:25720 KEGG:rno:25720 UCSC:RGD:3829 InParanoid:P51514
NextBio:607813 ArrayExpress:P51514 Genevestigator:P51514
Uniprot:P51514
Length = 707
Score = 391 (142.7 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 120/284 (42%), Positives = 149/284 (52%)
Query: 290 RLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLP-GLSHPSPGGSLLY-------- 340
RLD+AI LR+H G L + + I + N P G + + GGS L
Sbjct: 431 RLDDAIHVLRNHAVGPSTSLPTSHSDIHSLLGPSHNAPIGNLNSNYGGSSLVTNSRSASM 490
Query: 341 ---HQH----LGNSHAV-SSTVGA--------IPAGYLAGLASSSDTDGHIKIENIANSS 384
H+ L +H+V SSTV A P + G+ + S G + I +
Sbjct: 491 VGTHREDSVSLNGNHSVLSSTVAASNTELNHKTPESFRGGVQNQS---GSVVPTEIKTEN 547
Query: 385 KKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRSRRYCSSADEDSEDPQTKAMREK 444
K++ E E SD M K S R R ++ DED +P+ K REK
Sbjct: 548 KEKDE----NLHEPPSSDDMKSDDESSQKDI-KVSSRGRTSSTNEDEDL-NPEQKIEREK 601
Query: 445 ERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRE 504
ERR ANN RER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRE
Sbjct: 602 ERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRE 661
Query: 505 RNLNPKAACLRRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
RNLNPKAACL+RREEEK S P G H LS + MG
Sbjct: 662 RNLNPKAACLKRREEEKVSAASAEPPTTLPGTHPGLSETTNPMG 705
Score = 188 (71.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 88/351 (25%), Positives = 140/351 (39%)
Query: 30 TDSFSPDSPYFPFIMPPGRTVP--------PASIKRKRESIEPPENSDVDGAHGWYDEFG 81
+ S P +PY+ F R P P K+ R+ + P S V D+F
Sbjct: 147 SSSGKPGTPYYSFSATSSRRRPLHDSVALDPLQAKKVRK-VPPGLPSSVYAPSPNSDDFN 205
Query: 82 QASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAIST 141
+ SP + S KP P+S++ +++ + + H +
Sbjct: 206 R-ESPSYPSPKP-PTSMFASTFFMQDGTHSSSDLWSSSNGMSQPGFGGILGTSTSHMSQS 263
Query: 142 SNHLSQNLYPPSTLHLPPENMGY--MSPSGGPADSSNISSITASPLPPMSTIRNPAAASG 199
S++ S L+ L PP ++ ++ S P S + S ++SP S P +G
Sbjct: 264 SSYGS--LHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAAS--HTPPI-NG 318
Query: 200 VQSPSLYPGHNSPIVQTTGPGPGDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQ 259
S G+ + QT GD +GKALASIY D A
Sbjct: 319 SDSILGTRGNAAGSSQT-----GDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTAG 373
Query: 260 NSEW--VSGPHASSPHFTSDHRGLHMSIPEQ--QRLDEAIGYLR-----SHTEGMEECLD 310
S+W G SSP + + L + +Q + L +A+ +L+ S E + LD
Sbjct: 374 TSQWPRAGGQAPSSPSYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQSRMEDRLDRLD 433
Query: 311 DAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGY 361
DAI+V+RNHA G P S P+ + H LG SH ++ +G + + Y
Sbjct: 434 DAIHVLRNHAVG----PSTSLPTSHSDI--HSLLGPSH--NAPIGNLNSNY 476
Score = 51 (23.0 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPP 46
S+ YA + N+D F+ +SP +P PP
Sbjct: 192 SSVYAPSPNSDDFNRESPSYPSPKPP 217
>UNIPROTKB|F1NBS5 [details] [associations]
symbol:TCF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00510000046438
EMBL:AADN02066701 EMBL:AADN02066702 EMBL:AADN02066703
EMBL:AADN02066704 EMBL:AADN02066705 EMBL:AADN02066706
EMBL:AADN02066707 EMBL:AADN02066708 EMBL:AADN02066709
EMBL:AADN02066710 EMBL:AADN02066711 IPI:IPI00818539
Ensembl:ENSGALT00000031340 ArrayExpress:F1NBS5 Uniprot:F1NBS5
Length = 664
Score = 413 (150.4 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 160/529 (30%), Positives = 230/529 (43%)
Query: 37 SPYFPFIMPPGRTVPPASIK----RKRESIEPPENSDVDGAHGWYDEFGQASSPRFVSHK 92
S YF + P R +SI +K + P S V+ A D++ + + + K
Sbjct: 154 SQYFSYPNNPRRRGAESSIADGQPKKVRKVPPALPSSVNPAQSC-DDYSRDPAG-YTPSK 211
Query: 93 PNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAISTSNHLSQNLYPP 152
P PS++Y +Y+ + + S+S+ L Q+
Sbjct: 212 P-PSTVYPGAFYMADGLHNSPDLWSSPGAMSQSSYGAMLG-------SSSSPLPQSA-SF 262
Query: 153 STLHLPPENMGYMSPSGG-PADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNS 211
++LH E M Y SG ++S +++ P + P SG + G+
Sbjct: 263 NSLH-QHERMNYQLHSGELNGGLPSVSGFSSASTPYGVSSHTPPI-SGTDTMM---GNRG 317
Query: 212 PIVQTTGPGPGDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEW--VSGPHA 269
TT GD +GKALASIY D A S+W G A
Sbjct: 318 ----TTAGSSGDALGKALASIYSPDHSSNNFSSNPSTPVGSPQGL-AGTSQWSRAGGQGA 372
Query: 270 SSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECLD----DAINVIRNHADGQLN 325
SP + L + + RLDEAI LR+H G + D ++ +
Sbjct: 373 LSPSYEGSLHTLQNKM--EDRLDEAIHVLRNHAVGQTAAMPSNHGDMHGLLGSAPAHSAA 430
Query: 326 LPGLSHPSPGGSL-LYHQH---LGNSH---AVSSTVGAIPAGYLAGLASSSDTDGHIKIE 378
+ L P + L +H +G H +SST + SS D + + +
Sbjct: 431 VGSLGQAFPASVMSLGGRHPSLVGGGHPEDGLSSTPSMLHNHVTLPSQPSSLPDLNRQQD 490
Query: 379 NIANSSKKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRS---RRYCSSADEDSED 435
+ S ++ + T I ++ + K+ R +S DE +
Sbjct: 491 TYSGLSGGLGRSSVSSGTNEIKREEKEDEENTSVADNSEEEKKELKPSRNRTSTDE-ALS 549
Query: 436 PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVI 495
+ K +R++ERR ANN RER+R+RDINEA KELGRMC HLKTDK QTKL IL AV+VI
Sbjct: 550 LEDKDLRDRERRMANNARERVRVRDINEAFKELGRMCQMHLKTDKAQTKLIILQQAVQVI 609
Query: 496 MSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLGHHLSAVSQHMGI 543
+ LEQQVRERNLNPKAACL+RREEEK VG P++ LSA H G+
Sbjct: 610 LGLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMT--LSA--SHPGL 654
>UNIPROTKB|E2QW03 [details] [associations]
symbol:TCF12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00510000046438 OMA:TSSTNED EMBL:AAEX03016163
EMBL:AAEX03016164 Ensembl:ENSCAFT00000025746 Uniprot:E2QW03
Length = 703
Score = 387 (141.3 bits), Expect = 4.2e-38, Sum P(2) = 4.2e-38
Identities = 124/286 (43%), Positives = 150/286 (52%)
Query: 290 RLDEAIGYLRSHTEGMEECL----DDAINVI---RNHADGQLNL----PGLSHPSPGGSL 338
RLD+AI LR+H G L D +++ N + G LN L S S+
Sbjct: 427 RLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNASIGSLNSNYGGSNLVTSSRSASM 486
Query: 339 L-YHQH----LGNSHAV-SSTVGAIPA--------GYLAGLASSSDT--DGHIKIENIAN 382
+ H+ L +H+V SSTV A Y GL + S T IK EN
Sbjct: 487 VGTHREDSVSLNGNHSVLSSTVTASSTDLNHKTQENYRGGLQNQSGTVVPAEIKTEN--- 543
Query: 383 SSKKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRSRRYCSSADEDSEDPQTKAMR 442
K K+ + E SD M K S R R ++ DED +P+ K R
Sbjct: 544 ---KEKDENLH---EPPSSDDMKSDDESSQKDI-KVSSRGRTSSTNEDEDL-NPEQKIER 595
Query: 443 EKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQV 502
EKERR ANN RER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQV
Sbjct: 596 EKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQV 655
Query: 503 RERNLNPKAACLRRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
RERNLNPKAACL+RREEEK S P G H LS + MG
Sbjct: 656 RERNLNPKAACLKRREEEKVSAVSAEPPTTLPGTHPGLSETTNPMG 701
Score = 185 (70.2 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 96/366 (26%), Positives = 149/366 (40%)
Query: 30 TDSFSPDSPYFPFIMPPGRTVP--------PASIKRKRESIEPPENSDVDGAHGWYDEFG 81
+ S P +PY+ F R P P K+ R+ + P S V D+F
Sbjct: 144 SSSGKPGTPYYSFSATSSRRRPLHDSAALDPLQAKKVRK-VPPGLPSSVYAPSPNSDDFN 202
Query: 82 QASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAIST 141
+ SP + S KP P+S++ +++ + + H +
Sbjct: 203 R-ESPSYPSPKP-PTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSASHMSQS 260
Query: 142 SNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTI-RNPAAASGV 200
S++ S L+ L PP ++ P D I S LPPMS+ R ++S
Sbjct: 261 SSYGS--LHSHDRLSYPPHSVS-------PTD------INTS-LPPMSSFHRGSTSSSPY 304
Query: 201 QSPSLYPGHNSP--IVQTTGPGPG-----DTVGKALASIYPADQXXXXXXXXXXXXXXXX 253
+ S P N I+ T G G D +GKALASIY D
Sbjct: 305 VAASHTPPINGSDSILGTRGTAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSP 364
Query: 254 XXXXAQNSEWV--SGPHASSPHFTSDHRGLHMSIPEQ--QRLDEAIGYLR-----SHTEG 304
S+W G SSP + + L + +Q + L +A+ +L+ S E
Sbjct: 365 SPLTG-TSQWPRPGGQAPSSPSYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQSRMED 423
Query: 305 MEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYL-A 363
+ LDDAI+V+RNHA G P S P+ G S + H LG SH ++++G++ + Y +
Sbjct: 424 RLDRLDDAIHVLRNHAVG----PSTSLPA-GHSDI-HSLLGPSH--NASIGSLNSNYGGS 475
Query: 364 GLASSS 369
L +SS
Sbjct: 476 NLVTSS 481
Score = 51 (23.0 bits), Expect = 4.2e-38, Sum P(2) = 4.2e-38
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPP 46
S+ YA + N+D F+ +SP +P PP
Sbjct: 189 SSVYAPSPNSDDFNRESPSYPSPKPP 214
>MGI|MGI:101877 [details] [associations]
symbol:Tcf12 "transcription factor 12" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0035497 "cAMP response element
binding" evidence=ISO] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IDA] [GO:0071837
"HMG box domain binding" evidence=ISO] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 MGI:MGI:101877
GO:GO:0045893 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0046982 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0070888 eggNOG:NOG282899 GeneTree:ENSGT00510000046438
KO:K15603 CTD:6938 HOVERGEN:HBG003854 HOGENOM:HOG000234180
OMA:TSSTNED OrthoDB:EOG4K3KVX ChiTaRS:TCF12 EMBL:X64840 EMBL:M97635
EMBL:M97636 EMBL:AC093483 EMBL:AC157575 EMBL:AC159001
IPI:IPI00119042 IPI:IPI00403983 PIR:C45020 PIR:S19958
RefSeq:NP_001240794.1 RefSeq:NP_035674.2 UniGene:Mm.171615
UniGene:Mm.480117 ProteinModelPortal:Q61286 SMR:Q61286
DIP:DIP-42840N MINT:MINT-2567849 STRING:Q61286 PhosphoSite:Q61286
PaxDb:Q61286 PRIDE:Q61286 Ensembl:ENSMUST00000034755 GeneID:21406
KEGG:mmu:21406 UCSC:uc009qpf.2 UCSC:uc009qpi.1 InParanoid:Q61286
NextBio:300676 Bgee:Q61286 CleanEx:MM_TCF12 Genevestigator:Q61286
GermOnline:ENSMUSG00000032228 Uniprot:Q61286
Length = 706
Score = 385 (140.6 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 112/257 (43%), Positives = 141/257 (54%)
Query: 290 RLDEAIGYLRSHTEGMEECL----DDAINVI---RNHADGQLNL----PGLSHPSPGGSL 338
RLD+AI LR+H G L D +++ N + G LN L S S+
Sbjct: 430 RLDDAIHVLRNHAVGPSTSLPTSHSDIHSLLGPSHNASIGNLNSNYGGSSLVTNSRSASM 489
Query: 339 L-YHQH----LGNSHAV-SSTVGA--------IPAGYLAGLASSSDTDGHIKIENIANSS 384
+ H+ L +H+V SSTV A P + G+ + S G + I +
Sbjct: 490 VGTHREDSVSLNGNHSVLSSTVAASNTELNHKTPENFRGGVQNQS---GSVVPTEIKTEN 546
Query: 385 KKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRSRRYCSSADEDSEDPQTKAMREK 444
K++ E E SD M K S R R ++ DED +P+ K REK
Sbjct: 547 KEKDE----NLHEPPSSDDMKSDDESSQKDI-KVSSRGRTSSTNEDEDL-NPEQKIEREK 600
Query: 445 ERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRE 504
ERR ANN RER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRE
Sbjct: 601 ERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRE 660
Query: 505 RNLNPKAACLRRREEEK 521
RNLNPKAACL+RREEEK
Sbjct: 661 RNLNPKAACLKRREEEK 677
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 91/357 (25%), Positives = 141/357 (39%)
Query: 30 TDSFSPDSPYFPFIMPPGRTVP--------PASIKRKRESIEPPENSDVDGAHGWYDEFG 81
+ S P +PY+ F R P P K+ R+ + P S V D+F
Sbjct: 147 SSSGKPGTPYYSFSATSSRRRPLHDSVALDPLQAKKVRK-VPPGLPSSVYAPSPNSDDFN 205
Query: 82 QASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAIST 141
+ SP + S KP P+S++ +++ + + H +
Sbjct: 206 R-ESPSYPSPKP-PTSMFASTFFMQDGTHSSSDLWSSSNGMSQPGFGGILGTSTSHMSQS 263
Query: 142 SNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTI-RNPAAASGV 200
S++ S L+ L PP ++ P D I S LPPMS+ R ++S
Sbjct: 264 SSYGS--LHSHDRLSYPPHSVS-------PTD------INTS-LPPMSSFHRGSTSSSPY 307
Query: 201 QSPSLYPGHNSP--IVQTTGPGPG-----DTVGKALASIYPADQXXXXXXXXXXXXXXXX 253
+ S P N I+ T G G D +GKALASIY D
Sbjct: 308 VAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSP 367
Query: 254 XXXXAQNSEW--VSGPHASSPHFTSDHRGLHMSIPEQ--QRLDEAIGYLR-----SHTEG 304
S+W G SSP + + L + +Q + L +A+ +L+ S E
Sbjct: 368 SPLTG-TSQWPRAGGQAPSSPSYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQSRMED 426
Query: 305 MEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGY 361
+ LDDAI+V+RNHA G P S P+ + H LG SH ++++G + + Y
Sbjct: 427 RLDRLDDAIHVLRNHAVG----PSTSLPTSHSDI--HSLLGPSH--NASIGNLNSNY 475
Score = 51 (23.0 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPP 46
S+ YA + N+D F+ +SP +P PP
Sbjct: 192 SSVYAPSPNSDDFNRESPSYPSPKPP 217
>UNIPROTKB|F1NEE1 [details] [associations]
symbol:TCF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00510000046438
EMBL:AADN02066701 EMBL:AADN02066702 EMBL:AADN02066703
EMBL:AADN02066704 EMBL:AADN02066705 EMBL:AADN02066706
EMBL:AADN02066707 EMBL:AADN02066708 EMBL:AADN02066709
EMBL:AADN02066710 EMBL:AADN02066711 IPI:IPI00822789
Ensembl:ENSGALT00000041183 ArrayExpress:F1NEE1 Uniprot:F1NEE1
Length = 665
Score = 409 (149.0 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 161/530 (30%), Positives = 231/530 (43%)
Query: 37 SPYFPFIMPPGRTVPPASI---KRKRESIEPPE--NSDVDGAHGWYDEFGQASSPRFVSH 91
S YF + P R +SI + K+ PP +S V G D++ + + +
Sbjct: 155 SQYFSYPNNPRRRGAESSIADGQPKKVRKVPPALPSSXVSSNSG--DDYSRDPAG-YTPS 211
Query: 92 KPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAISTSNHLSQNLYP 151
KP PS++Y +Y+ + + S+S+ L Q+
Sbjct: 212 KP-PSTVYPGAFYMADGLHNSPDLWSSPGAMSQSSYGAMLG-------SSSSPLPQSA-S 262
Query: 152 PSTLHLPPENMGYMSPSGG-PADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHN 210
++LH E M Y SG ++S +++ P + P SG + G+
Sbjct: 263 FNSLH-QHERMNYQLHSGELNGGLPSVSGFSSASTPYGVSSHTPPI-SGTDTMM---GNR 317
Query: 211 SPIVQTTGPGPGDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEW--VSGPH 268
TT GD +GKALASIY D A S+W G
Sbjct: 318 G----TTAGSSGDALGKALASIYSPDHSSNNFSSNPSTPVGSPQGL-AGTSQWSRAGGQG 372
Query: 269 ASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECLD----DAINVIRNHADGQL 324
A SP + L + + RLDEAI LR+H G + D ++ +
Sbjct: 373 ALSPSYEGSLHTLQNKM--EDRLDEAIHVLRNHAVGQTAAMPSNHGDMHGLLGSAPAHSA 430
Query: 325 NLPGLSHPSPGGSL-LYHQH---LGNSH---AVSSTVGAIPAGYLAGLASSSDTDGHIKI 377
+ L P + L +H +G H +SST + SS D + +
Sbjct: 431 AVGSLGQAFPASVMSLGGRHPSLVGGGHPEDGLSSTPSMLHNHVTLPSQPSSLPDLNRQQ 490
Query: 378 ENIANSSKKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRS---RRYCSSADEDSE 434
+ + S ++ + T I ++ + K+ R +S DE +
Sbjct: 491 DTYSGLSGGLGRSSVSSGTNEIKREEKEDEENTSVADNSEEEKKELKPSRNRTSTDE-AL 549
Query: 435 DPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEV 494
+ K +R++ERR ANN RER+R+RDINEA KELGRMC HLKTDK QTKL IL AV+V
Sbjct: 550 SLEDKDLRDRERRMANNARERVRVRDINEAFKELGRMCQMHLKTDKAQTKLIILQQAVQV 609
Query: 495 IMSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLGHHLSAVSQHMGI 543
I+ LEQQVRERNLNPKAACL+RREEEK VG P++ LSA H G+
Sbjct: 610 ILGLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMT--LSA--SHPGL 655
>UNIPROTKB|Q60420 [details] [associations]
symbol:TCF12 "Transcription factor 12" species:10036
"Mesocricetus auratus" [GO:0045666 "positive regulation of neuron
differentiation" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0070888 "E-box
binding" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 GO:GO:0046982 GO:GO:0045666 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0070888 HOVERGEN:HBG003854 EMBL:U12585
PIR:A55021 ProteinModelPortal:Q60420 Uniprot:Q60420
Length = 437
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 122/284 (42%), Positives = 151/284 (53%)
Query: 290 RLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLP-GLSHPSPGGSLLY-------- 340
RLD+AI LR+H G L + + I + N P G + + GGS L
Sbjct: 161 RLDDAIHVLRNHAVGPSTSLPTSHSDIHSLLGPSHNAPIGNLNSNYGGSSLVTNSRSASM 220
Query: 341 ---HQ----HLGNSHAV-SSTVGA--------IPAGYLAGLASSSDTDGHIKIENIANSS 384
H+ +L +H+V SSTV A P Y GL + S G++ I +
Sbjct: 221 VGTHREDSVNLNGNHSVLSSTVAASNTDLNHKTPENYRGGLQNQS---GNVVPTEIKTEN 277
Query: 385 KKRKELTIDTKTESICSDQMXXXXXXXXXXXXKGSKRSRRYCSSADEDSEDPQTKAMREK 444
K++ E E SD M K S R R ++ DED +P+ K REK
Sbjct: 278 KEKDE----NLHEPPSSDDMKSDDESSQKDI-KVSSRGRTSSTNEDEDL-NPEQKIEREK 331
Query: 445 ERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRE 504
ERR ANN RER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRE
Sbjct: 332 ERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRE 391
Query: 505 RNLNPKAACLRRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
RNLNPKAACL+RREEEK S P G H LS + MG
Sbjct: 392 RNLNPKAACLKRREEEKVSAASAEPPTTLPGTHPGLSETTNPMG 435
Score = 146 (56.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 61/208 (29%), Positives = 90/208 (43%)
Query: 171 PADSSNISSITASPLPPMSTI-RNPAAASGVQSPSLYPGHNSP--IVQTTGPGPG----- 222
P S + + I+ S LPPMS+ R ++S + S P N I+ G G
Sbjct: 9 PPHSVSPTDISTS-LPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGARGNAAGSSQTG 67
Query: 223 DTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEW--VSGPHASSPHFTSDHRG 280
D +GKALASIY D S+W G SSP + +
Sbjct: 68 DALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG-TSQWPRAGGQAPSSPSYENSLHS 126
Query: 281 LHMSIPEQ--QRLDEAIGYLR-----SHTEGMEECLDDAINVIRNHADGQLNLPGLSHPS 333
L + +Q + L +A+ +L+ S E + LDDAI+V+RNHA G P S P+
Sbjct: 127 LKNRVEQQLHEHLQDAMSFLKDVCEQSRMEDRLDRLDDAIHVLRNHAVG----PSTSLPT 182
Query: 334 PGGSLLYHQHLGNSHAVSSTVGAIPAGY 361
+ H LG SH ++ +G + + Y
Sbjct: 183 SHSDI--HSLLGPSH--NAPIGNLNSNY 206
>UNIPROTKB|F1NKC0 [details] [associations]
symbol:TCF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00510000046438
EMBL:AADN02066701 EMBL:AADN02066702 EMBL:AADN02066703
EMBL:AADN02066704 EMBL:AADN02066705 EMBL:AADN02066706
EMBL:AADN02066707 EMBL:AADN02066708 EMBL:AADN02066709
EMBL:AADN02066710 EMBL:AADN02066711 IPI:IPI00819963
Ensembl:ENSGALT00000041175 ArrayExpress:F1NKC0 Uniprot:F1NKC0
Length = 279
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 115/274 (41%), Positives = 153/274 (55%)
Query: 296 GYLRSHTEGMEECLDDAINVIRNHADGQ---LNLP-------GL--------SHPSPGGS 337
G L + ME+ LD+AI+V+RNHA GQ + P GL P PG
Sbjct: 14 GSLHTLQNKMEDRLDEAIHVLRNHAVGQTAAMEQPRGHAWAAGLCTRTQCCCGQPGPGLP 73
Query: 338 LLYHQHLGNSHAVSSTVGAIPA--GYLAGLASSSDTDGHIKIENIANSSKK-RKELTIDT 394
L H L ++ ++ +P+ L L DT + ++++ + + ++E D
Sbjct: 74 CLRHHILSSTPSMLHNHVTLPSQPSSLPDLNRQQDTYRGLGRSSVSSGTNEIKREEKEDE 133
Query: 395 KTESICSDQMXXXXXXXXXXXXKGSKRSRRYCSSADEDSED----PQTKAMREKERRQAN 450
+ S+ + K K SR +S DED ED P+ KA RE+ERR AN
Sbjct: 134 ENTSVADNS---------EEEKKELKPSRNR-TSQDEDEEDDLLPPEQKAERERERRVAN 183
Query: 451 NVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPK 510
N RER+R+RDINEA KELGRMC HL ++KPQTKL IL+ AV VI++LEQQVRERNLNPK
Sbjct: 184 NARERLRVRDINEAFKELGRMCQLHLNSEKPQTKLLILHQAVSVILNLEQQVRERNLNPK 243
Query: 511 AACLRRREEEKAEDSVG-PKLGHHLSAVSQHMGI 543
AACL+RREEEK VG P++ LSA H G+
Sbjct: 244 AACLKRREEEKVSGVVGDPQMT--LSA--SHPGL 273
>UNIPROTKB|H0YNP8 [details] [associations]
symbol:TCF12 "Transcription factor 12" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC010999 EMBL:AC016525
EMBL:AC090511 EMBL:AC090532 HGNC:HGNC:11623 ChiTaRS:TCF12
ProteinModelPortal:H0YNP8 SMR:H0YNP8 Ensembl:ENST00000559703
Bgee:H0YNP8 Uniprot:H0YNP8
Length = 339
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 114/274 (41%), Positives = 144/274 (52%)
Query: 290 RLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLP-GLSHPSPGGSLLYHQHLGNSH 348
RLD+AI LR+H G L + I + N P G + + GGS L S
Sbjct: 64 RLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASM 123
Query: 349 AVSSTVGAIPAG----YLAGLASSSDTD-GHIKIENIANS--SKKRKELTIDTKTESICS 401
+ ++ L+ ++S TD H EN S+ +T + KTE+
Sbjct: 124 VGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEK 183
Query: 402 DQ------MXXXXXXXXXXXXKGSKRSRRYCSSADEDSE-DPQTKAMREKERRQANNVRE 454
D+ K K S R +S +ED + +P+ K REKERR ANN RE
Sbjct: 184 DENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSTNEDEDLNPEQKIEREKERRMANNARE 243
Query: 455 RIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACL 514
R+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL
Sbjct: 244 RLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACL 303
Query: 515 RRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
+RREEEK S P G H LS + MG
Sbjct: 304 KRREEEKVSAVSAEPPTTLPGTHPGLSETTNPMG 337
>UNIPROTKB|B4E1W1 [details] [associations]
symbol:TCF12 "Transcription factor 12" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG003854 EMBL:AC010999
EMBL:AC016525 EMBL:AC090511 EMBL:AC090532 UniGene:Hs.511504
HGNC:HGNC:11623 HOGENOM:HOG000234180 ChiTaRS:TCF12 IPI:IPI01018775
EMBL:AK304007 SMR:B4E1W1 STRING:B4E1W1 Ensembl:ENST00000537840
UCSC:uc010ugo.2 Uniprot:B4E1W1
Length = 446
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 114/275 (41%), Positives = 146/275 (53%)
Query: 290 RLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLP-GLSHPSPGGSLLYHQHLGNSH 348
RLD+AI LR+H G L + I + N P G + + GGS L S
Sbjct: 170 RLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASM 229
Query: 349 AVSSTVGAIPAG----YLAGLASSSDTD-GHIKIENIANS--SKKRKELTIDTKTESICS 401
+ ++ L+ ++S TD H EN S+ +T + KTE+
Sbjct: 230 VGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEK 289
Query: 402 DQMXXX--XXXXXXXXXKGSKR-----SRRYCSSADEDSE-DPQTKAMREKERRQANNVR 453
D+ + S++ SR SS +ED + +P+ K REKERR ANN R
Sbjct: 290 DENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNAR 349
Query: 454 ERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAAC 513
ER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAAC
Sbjct: 350 ERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAAC 409
Query: 514 LRRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
L+RREEEK S P G H LS + MG
Sbjct: 410 LKRREEEKVSAVSAEPPTTLPGTHPGLSETTNPMG 444
Score = 130 (50.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 72/243 (29%), Positives = 103/243 (42%)
Query: 139 ISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAAS 198
IST N L +L H P ++ P S + + I S LPPMS+ + +S
Sbjct: 14 ISTVNLLVIHLLS----HQPVCSLALSLCKSYPPHSVSPTDINTS-LPPMSSFHRGSTSS 68
Query: 199 GVQSPSLYPGHNSPI------VQTTGPGPG-----DTVGKALASIYPADQXXXXXXXXXX 247
SP + H PI + T G G D +GKALASIY D
Sbjct: 69 ---SPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPS 125
Query: 248 XXXXXXXXXXAQNSEWVSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEE 307
S+W P +P S LH S+ Q R+++ + +
Sbjct: 126 TPVGSPSPLTG-TSQWPR-PGGQAPSSPSYENSLH-SL--QSRMEDRL-----------D 169
Query: 308 CLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYL-AGLA 366
LDDAI+V+RNHA G P S P+ G S + H LG SH ++ +G++ + Y + L
Sbjct: 170 RLDDAIHVLRNHAVG----PSTSLPA-GHSDI-HSLLGPSH--NAPIGSLNSNYGGSSLV 221
Query: 367 SSS 369
+SS
Sbjct: 222 ASS 224
>UNIPROTKB|B4DZP2 [details] [associations]
symbol:TCF12 "cDNA FLJ51686, highly similar to
Transcription factor 12" species:9606 "Homo sapiens" [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG003854 EMBL:AC010999 EMBL:AC016525
EMBL:AC090511 EMBL:AC090532 UniGene:Hs.511504 HGNC:HGNC:11623
ChiTaRS:TCF12 EMBL:AK303028 IPI:IPI01018775
ProteinModelPortal:B4DZP2 SMR:B4DZP2 STRING:B4DZP2
Ensembl:ENST00000559710 UCSC:uc010ugq.2 ArrayExpress:B4DZP2
Bgee:B4DZP2 Uniprot:B4DZP2
Length = 316
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 114/275 (41%), Positives = 146/275 (53%)
Query: 290 RLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLP-GLSHPSPGGSLLYHQHLGNSH 348
RLD+AI LR+H G L + I + N P G + + GGS L S
Sbjct: 40 RLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASM 99
Query: 349 AVSSTVGAIPAG----YLAGLASSSDTD-GHIKIENIANS--SKKRKELTIDTKTESICS 401
+ ++ L+ ++S TD H EN S+ +T + KTE+
Sbjct: 100 VGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEK 159
Query: 402 DQMXXX--XXXXXXXXXKGSKR-----SRRYCSSADEDSE-DPQTKAMREKERRQANNVR 453
D+ + S++ SR SS +ED + +P+ K REKERR ANN R
Sbjct: 160 DENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNAR 219
Query: 454 ERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAAC 513
ER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAAC
Sbjct: 220 ERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAAC 279
Query: 514 LRRREEEKAED-SVGPKL---GHH--LSAVSQHMG 542
L+RREEEK S P G H LS + MG
Sbjct: 280 LKRREEEKVSAVSAEPPTTLPGTHPGLSETTNPMG 314
>UNIPROTKB|K7EKB9 [details] [associations]
symbol:TCF3 "Transcription factor E2-alpha" species:9606
"Homo sapiens" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005321
EMBL:AC006274 HGNC:HGNC:11633 Ensembl:ENST00000592628
Uniprot:K7EKB9
Length = 179
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 82/138 (59%), Positives = 99/138 (71%)
Query: 417 KGSKRSRRYCSSADEDSED---PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCM 473
K ++ R +S DED +D P+ KA REKERR ANN RER+R+RDINEA KELGRMC
Sbjct: 43 KKELKAPRARTSPDEDEDDLLPPEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQ 102
Query: 474 AHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLGH 532
HL ++KPQTKL IL+ AV VI++LEQQVRERNLNPKAACL+RREEEK VG P++
Sbjct: 103 LHLNSEKPQTKLLILHQAVSVILNLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMV- 161
Query: 533 HLSAVSQHMGIQPPSFPS 550
LSA H G+ P+
Sbjct: 162 -LSA--PHPGLSEAHNPA 176
>UNIPROTKB|K7EPS2 [details] [associations]
symbol:TCF3 "Transcription factor E2-alpha" species:9606
"Homo sapiens" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005321
EMBL:AC006274 HGNC:HGNC:11633 Ensembl:ENST00000587425
Uniprot:K7EPS2
Length = 163
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 82/138 (59%), Positives = 99/138 (71%)
Query: 417 KGSKRSRRYCSSADEDSED---PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCM 473
K ++ R +S DED +D P+ KA REKERR ANN RER+R+RDINEA KELGRMC
Sbjct: 27 KKELKAPRARTSPDEDEDDLLPPEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQ 86
Query: 474 AHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLGH 532
HL ++KPQTKL IL+ AV VI++LEQQVRERNLNPKAACL+RREEEK VG P++
Sbjct: 87 LHLNSEKPQTKLLILHQAVSVILNLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMV- 145
Query: 533 HLSAVSQHMGIQPPSFPS 550
LSA H G+ P+
Sbjct: 146 -LSA--PHPGLSEAHNPA 160
>UNIPROTKB|K7ERZ7 [details] [associations]
symbol:TCF3 "Transcription factor E2-alpha" species:9606
"Homo sapiens" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005321
EMBL:AC006274 HGNC:HGNC:11633 Ensembl:ENST00000593064
Uniprot:K7ERZ7
Length = 204
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 82/138 (59%), Positives = 99/138 (71%)
Query: 417 KGSKRSRRYCSSADEDSED---PQTKAMREKERRQANNVRERIRIRDINEALKELGRMCM 473
K ++ R +S DED +D P+ KA REKERR ANN RER+R+RDINEA KELGRMC
Sbjct: 68 KKELKAPRARTSPDEDEDDLLPPEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQ 127
Query: 474 AHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLGH 532
HL ++KPQTKL IL+ AV VI++LEQQVRERNLNPKAACL+RREEEK VG P++
Sbjct: 128 LHLNSEKPQTKLLILHQAVSVILNLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMV- 186
Query: 533 HLSAVSQHMGIQPPSFPS 550
LSA H G+ P+
Sbjct: 187 -LSA--PHPGLSEAHNPA 201
>UNIPROTKB|Q91605 [details] [associations]
symbol:Q91605 "Transcription factor XE1.1" species:8355
"Xenopus laevis" [GO:0045666 "positive regulation of neuron
differentiation" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0070888 "E-box
binding" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 GO:GO:0046982 GO:GO:0045666 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0070888 HOVERGEN:HBG003854 EMBL:U25959
UniGene:Xl.8165 ProteinModelPortal:Q91605 Xenbase:XB-GENE-5799717
Uniprot:Q91605
Length = 152
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 74/106 (69%), Positives = 86/106 (81%)
Query: 417 KGSKRSRRYCSSADEDSE-DPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAH 475
K K SR SS +ED + +P+ K REKERR ANN RER+R+RDINEA KELGRMC H
Sbjct: 18 KEMKSSRGRTSSINEDEDLNPEQKVEREKERRMANNARERLRVRDINEAFKELGRMCQLH 77
Query: 476 LKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEK 521
LK++KPQTKL IL+ AV VI++LEQQVRERNLNPKAACL+RREEEK
Sbjct: 78 LKSEKPQTKLLILHQAVAVILNLEQQVRERNLNPKAACLKRREEEK 123
>UNIPROTKB|Q28772 [details] [associations]
symbol:TCF12 "Transcription factor 12" species:9557 "Papio
hamadryas" [GO:0045666 "positive regulation of neuron
differentiation" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0070888 "E-box
binding" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 GO:GO:0046982 GO:GO:0045666 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0070888 HOVERGEN:HBG003854 EMBL:X97234
ProteinModelPortal:Q28772 PRIDE:Q28772 Uniprot:Q28772
Length = 160
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 74/106 (69%), Positives = 86/106 (81%)
Query: 417 KGSKRSRRYCSSADEDSE-DPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAH 475
K K S R +S +ED + +P+ K REKERR ANN RER+R+RDINEA KELGRMC H
Sbjct: 26 KDIKVSSRGRTSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLH 85
Query: 476 LKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEK 521
LK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAACL+RREEEK
Sbjct: 86 LKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEK 131
>UNIPROTKB|F1NVL4 [details] [associations]
symbol:TCF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000080 "G1 phase of mitotic cell cycle" evidence=IEA]
[GO:0000788 "nuclear nucleosome" evidence=IEA] [GO:0001779 "natural
killer cell differentiation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IEA] [GO:0032496
"response to lipopolysaccharide" evidence=IEA] [GO:0033077 "T cell
differentiation in thymus" evidence=IEA] [GO:0033152
"immunoglobulin V(D)J recombination" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043966 "histone
H3 acetylation" evidence=IEA] [GO:0043967 "histone H4 acetylation"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048468 "cell
development" evidence=IEA] [GO:0048541 "Peyer's patch development"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0070644
"vitamin D response element binding" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005737 GO:GO:0050821 GO:GO:0051091 GO:GO:0042493
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0003713 GO:GO:0030890
GO:GO:0043967 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0045787
GO:GO:0000080 GO:GO:0043966 GO:GO:0000788
GeneTree:ENSGT00510000046438 GO:GO:0070644 EMBL:AADN02066701
EMBL:AADN02066702 EMBL:AADN02066703 EMBL:AADN02066704
EMBL:AADN02066705 EMBL:AADN02066706 EMBL:AADN02066707
EMBL:AADN02066708 EMBL:AADN02066709 EMBL:AADN02066710
EMBL:AADN02066711 IPI:IPI00580083 Ensembl:ENSGALT00000001637
ArrayExpress:F1NVL4 Uniprot:F1NVL4
Length = 669
Score = 367 (134.2 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 83/132 (62%), Positives = 97/132 (73%)
Query: 417 KGSKRSRRYCSSADEDSED----PQTKAMREKERRQANNVRERIRIRDINEALKELGRMC 472
K K SR +S DED ED P+ KA RE+ERR ANN RER+R+RDINEA KELGRMC
Sbjct: 533 KELKPSRNR-TSQDEDEEDDLLPPEQKAERERERRVANNARERLRVRDINEAFKELGRMC 591
Query: 473 MAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLG 531
HL ++KPQTKL IL+ AV VI++LEQQVRERNLNPKAACL+RREEEK VG P++
Sbjct: 592 QLHLNSEKPQTKLLILHQAVSVILNLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMT 651
Query: 532 HHLSAVSQHMGI 543
LSA H G+
Sbjct: 652 --LSA--SHPGL 659
Score = 38 (18.4 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 157 LPPENMGYMSPSGGPADSSNISSITASPLP 186
LP N SP GP + +T+ LP
Sbjct: 89 LPSHNSLSSSPFLGPGLVGDFGDVTSLSLP 118
>UNIPROTKB|B4DGI9 [details] [associations]
symbol:TCF12 "cDNA FLJ52589, highly similar to
Transcription factor 12" species:9606 "Homo sapiens" [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG003854 EMBL:AC010999 EMBL:AC016525
EMBL:AC090511 EMBL:AC090532 UniGene:Hs.511504 HGNC:HGNC:11623
ChiTaRS:TCF12 EMBL:AK294617 IPI:IPI00940466 STRING:B4DGI9
Ensembl:ENST00000559609 ArrayExpress:B4DGI9 Bgee:B4DGI9
Uniprot:B4DGI9
Length = 666
Score = 359 (131.4 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 100/241 (41%), Positives = 130/241 (53%)
Query: 290 RLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLP-GLSHPSPGGSLLYHQHLGNSH 348
RLD+AI LR+H G L + I + N P G + + GGS L S
Sbjct: 426 RLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASM 485
Query: 349 AVSSTVGAIPAG----YLAGLASSSDTD-GHIKIENIANS--SKKRKELTIDTKTESICS 401
+ ++ L+ ++S TD H EN S+ +T + KTE+
Sbjct: 486 VGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEK 545
Query: 402 DQMXXX--XXXXXXXXXKGSKR-----SRRYCSSADEDSE-DPQTKAMREKERRQANNVR 453
D+ + S++ SR SS +ED + +P+ K REKERR ANN R
Sbjct: 546 DENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNAR 605
Query: 454 ERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAAC 513
ER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SLEQQVRERNLNPKAAC
Sbjct: 606 ERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAAC 665
Query: 514 L 514
L
Sbjct: 666 L 666
Score = 178 (67.7 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 95/366 (25%), Positives = 147/366 (40%)
Query: 30 TDSFSPDSPYFPFIMPPGRTVP--------PASIKRKRESIEPPENSDVDGAHGWYDEFG 81
+ S P + Y+ F R P P K+ R+ + P S V D+F
Sbjct: 143 SSSGKPGTAYYSFSATSSRRRPLHDSAALDPLQAKKVRK-VPPGLPSSVYAPSPNSDDFN 201
Query: 82 QASSPRFVSHKPNPSSIYTDPYYINNTXXXXXXXXXXXXXIQXXXXXXXXXXXXEHAIST 141
+ SP + S KP P+S++ +++ + + H +
Sbjct: 202 R-ESPSYPSPKP-PTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQS 259
Query: 142 SNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTI-RNPAAASGV 200
S++ NL+ L PP ++ P D I S LPPMS+ R ++S
Sbjct: 260 SSY--GNLHSHDRLSYPPHSVS-------PTD------INTS-LPPMSSFHRGSTSSSPY 303
Query: 201 QSPSLYPGHNSP--IVQTTGPGPG-----DTVGKALASIYPADQXXXXXXXXXXXXXXXX 253
+ S P N I+ T G G D +GKALASIY D
Sbjct: 304 VAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSP 363
Query: 254 XXXXAQNSEWV--SGPHASSPHFTSDHRGLHMSIPEQ--QRLDEAIGYLR-----SHTEG 304
S+W G SSP + + L + +Q + L +A+ +L+ S E
Sbjct: 364 SPLTG-TSQWPRPGGQAPSSPSYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQSRMED 422
Query: 305 MEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYL-A 363
+ LDDAI+V+RNHA G P S P+ G S + H LG SH ++ +G++ + Y +
Sbjct: 423 RLDRLDDAIHVLRNHAVG----PSTSLPA-GHSDI-HSLLGPSH--NAPIGSLNSNYGGS 474
Query: 364 GLASSS 369
L +SS
Sbjct: 475 SLVASS 480
Score = 51 (23.0 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 22 SNSYANN-NTDSFSPDSPYFPFIMPP 46
S+ YA + N+D F+ +SP +P PP
Sbjct: 188 SSVYAPSPNSDDFNRESPSYPSPKPP 213
>UNIPROTKB|K7EMM4 [details] [associations]
symbol:TCF3 "Transcription factor E2-alpha" species:9606
"Homo sapiens" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005321
EMBL:AC006274 HGNC:HGNC:11633 Ensembl:ENST00000590684
Uniprot:K7EMM4
Length = 159
Score = 338 (124.0 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 76/135 (56%), Positives = 94/135 (69%)
Query: 417 KGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHL 476
K ++ R +S DE + K +R++ERR ANN RER+R+RDINEA +ELGRMC HL
Sbjct: 27 KKELKAPRARTSTDEVLS-LEEKDLRDRERRMANNARERVRVRDINEAFRELGRMCQMHL 85
Query: 477 KTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVG-PKLGHHLS 535
K+DK QTKL IL AV+VI+ LEQQVRERNLNPKAACL+RREEEK VG P++ LS
Sbjct: 86 KSDKAQTKLLILQQAVQVILGLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMV--LS 143
Query: 536 AVSQHMGIQPPSFPS 550
A H G+ P+
Sbjct: 144 A--PHPGLSEAHNPA 156
>UNIPROTKB|F1NMZ7 [details] [associations]
symbol:F1NMZ7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0070888 "E-box binding" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0045893
GO:GO:0003700 GO:GO:0005667 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0070888 GeneTree:ENSGT00510000046438 EMBL:AADN02040328
EMBL:AADN02040329 EMBL:AADN02040330 EMBL:AADN02040331
EMBL:AADN02040332 EMBL:AADN02040333 EMBL:AADN02040334
EMBL:AADN02040335 EMBL:AADN02040336 EMBL:AADN02040337
EMBL:AADN02040338 EMBL:AADN02040339 EMBL:AADN02040340
EMBL:AADN02045539 IPI:IPI00821221 Ensembl:ENSGALT00000039186
ArrayExpress:F1NMZ7 Uniprot:F1NMZ7
Length = 85
Score = 337 (123.7 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 66/83 (79%), Positives = 73/83 (87%)
Query: 439 KAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSL 498
K REKERR ANN RER+R+RDINEA KELGRMC HLK++KPQTKL IL+ AV VI+SL
Sbjct: 1 KIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSL 60
Query: 499 EQQVRERNLNPKAACLRRREEEK 521
EQQVRERNLNPKAACL+RREEEK
Sbjct: 61 EQQVRERNLNPKAACLKRREEEK 83
>UNIPROTKB|Q90683 [details] [associations]
symbol:TCF4 "Transcription factor 4" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=ISS] [GO:0070888
"E-box binding" evidence=ISS] [GO:0045666 "positive regulation of
neuron differentiation" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0046982 GO:GO:0045666
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0070888 eggNOG:NOG282899
HOGENOM:HOG000234180 OrthoDB:EOG4K3KVX EMBL:U35054 IPI:IPI00601152
UniGene:Gga.771 ProteinModelPortal:Q90683 STRING:Q90683
InParanoid:Q90683 Uniprot:Q90683
Length = 85
Score = 336 (123.3 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 67/83 (80%), Positives = 73/83 (87%)
Query: 439 KAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSL 498
KA REKERR ANN RER+R+RDINEA KELGRM HLK+DKPQTKL IL+ AV VI+SL
Sbjct: 1 KAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSL 60
Query: 499 EQQVRERNLNPKAACLRRREEEK 521
EQQVRERNLNPKAACL+RREEEK
Sbjct: 61 EQQVRERNLNPKAACLKRREEEK 83
>UNIPROTKB|Q788W0 [details] [associations]
symbol:G12 "G12 protein" species:9031 "Gallus gallus"
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=IEA]
[GO:0000788 "nuclear nucleosome" evidence=IEA] [GO:0001779 "natural
killer cell differentiation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IEA] [GO:0032496
"response to lipopolysaccharide" evidence=IEA] [GO:0033077 "T cell
differentiation in thymus" evidence=IEA] [GO:0033152
"immunoglobulin V(D)J recombination" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043966 "histone
H3 acetylation" evidence=IEA] [GO:0043967 "histone H4 acetylation"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048468 "cell
development" evidence=IEA] [GO:0048541 "Peyer's patch development"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0070644
"vitamin D response element binding" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005737 GO:GO:0050821 GO:GO:0051091 GO:GO:0042493
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0003713 GO:GO:0030890
GO:GO:0043967 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0045787
GO:GO:0000080 GO:GO:0043966 GO:GO:0000788
GeneTree:ENSGT00510000046438 HOGENOM:HOG000234180 GO:GO:0070644
EMBL:AADN02066701 EMBL:AADN02066702 EMBL:AADN02066703
EMBL:AADN02066704 EMBL:AADN02066705 EMBL:AADN02066706
EMBL:AADN02066707 EMBL:AADN02066708 EMBL:AADN02066709
EMBL:AADN02066710 EMBL:AADN02066711 EMBL:U35053 IPI:IPI00822003
UniGene:Gga.41918 STRING:Q788W0 Ensembl:ENSGALT00000041174
InParanoid:Q788W0 Uniprot:Q788W0
Length = 85
Score = 330 (121.2 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 64/83 (77%), Positives = 73/83 (87%)
Query: 439 KAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSL 498
KA RE+ERR ANN RER+R+RDINEA KELGRMC HL ++KPQTKL IL+ AV VI++L
Sbjct: 1 KAERERERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQTKLLILHQAVSVILNL 60
Query: 499 EQQVRERNLNPKAACLRRREEEK 521
EQQVRERNLNPKAACL+RREEEK
Sbjct: 61 EQQVRERNLNPKAACLKRREEEK 83
>UNIPROTKB|K7GS27 [details] [associations]
symbol:TCF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 SMART:SM00353 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00510000046438 EMBL:CU929941
Ensembl:ENSSSCT00000036325 Uniprot:K7GS27
Length = 456
Score = 217 (81.4 bits), Expect = 8.2e-24, Sum P(3) = 8.2e-24
Identities = 46/73 (63%), Positives = 54/73 (73%)
Query: 417 KGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHL 476
K RSR S+ D++ P+ KA REKERR ANN RER+R+RDINEA KELGRM HL
Sbjct: 382 KSITRSRS--SNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHL 439
Query: 477 KTDKPQTKLGILN 489
K+DKPQTKL IL+
Sbjct: 440 KSDKPQTKLLILH 452
Score = 118 (46.6 bits), Expect = 8.2e-24, Sum P(3) = 8.2e-24
Identities = 61/205 (29%), Positives = 87/205 (42%)
Query: 156 HLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSP- 212
H+P ++ Y S P + S+ S+ S LPPMST + + + S P N
Sbjct: 87 HIP-QSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHR-SGTNHYSTSSCTPPANGTD 144
Query: 213 -IVQTTGPGP------GDTVGKALASIYPADQXXXXXXXXXXXXXXXXXXXXAQNSEWV- 264
I+ G G GD +GKALASIY D A + W
Sbjct: 145 SIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSR 204
Query: 265 SGPHASSPHFTSDHRG-LHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQ 323
+G ASS + ++ G LH S+ Q R+++ + E L DAI+V+RNHA G
Sbjct: 205 NGGQASS---SPNYEGPLH-SL--QSRIEDRL-----------ESLYDAIHVLRNHAVG- 246
Query: 324 LNLPGLSHPSPGGSLLYHQHLGNSH 348
P + P G + H +G SH
Sbjct: 247 ---PSTAMPGGHGDM--HGIIGPSH 266
Score = 47 (21.6 bits), Expect = 8.2e-24, Sum P(3) = 8.2e-24
Identities = 19/71 (26%), Positives = 30/71 (42%)
Query: 19 MSYSNS---YANN-NTDSFSPDSPYFPFIMPPGRTVPPASIKRK-RESIEPPENSDVDGA 73
M Y N YA + +T ++ DSP +P P T P + + S +P +S
Sbjct: 16 MYYYNGKAVYAPSASTADYNRDSPGYPSSKPAASTFPSSFFMQDGHHSSDPWSSSSGMNQ 75
Query: 74 HGWYDEFGQAS 84
G+ G +S
Sbjct: 76 PGYGGMLGNSS 86
>WB|WBGene00001949 [details] [associations]
symbol:hlh-2 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0048666 "neuron development" evidence=IGI;IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0008406
"gonad development" evidence=IMP] [GO:0040026 "positive regulation
of vulval development" evidence=IMP] [GO:0007276 "gamete
generation" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0045138
"tail tip morphogenesis" evidence=IGI;IMP] [GO:0035262 "gonad
morphogenesis" evidence=IMP] [GO:0043068 "positive regulation of
programmed cell death" evidence=IGI;IMP] [GO:0040025 "vulval
development" evidence=IMP] [GO:0014018 "neuroblast fate
specification" evidence=IGI;IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA;IPI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0045944
GO:GO:0010171 GO:GO:0000981 GO:GO:0048666 GO:GO:0040035
GO:GO:0040039 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0045138
GO:GO:0040025 GO:GO:0000977 GO:GO:0043068 GO:GO:0040026
GO:GO:0007276 GO:GO:0035262 GeneTree:ENSGT00510000046438 KO:K15603
EMBL:Z71258 GO:GO:0014018 EMBL:Z71265 PIR:T18853
RefSeq:NP_001021581.1 ProteinModelPortal:G5EEG9 SMR:G5EEG9
IntAct:G5EEG9 EnsemblMetazoa:M05B5.5a GeneID:172458
KEGG:cel:CELE_M05B5.5 CTD:172458 WormBase:M05B5.5a OMA:DAMSSMY
NextBio:875589 Uniprot:G5EEG9
Length = 399
Score = 237 (88.5 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 53/113 (46%), Positives = 74/113 (65%)
Query: 427 SSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLK-TDKPQTKL 485
SS+ S++ ++ +RR NN RER+R+RDIN A KELGRMC H + T++ QTKL
Sbjct: 284 SSSSRLSDNESMSDDKDTDRRSQNNARERVRVRDINSAFKELGRMCTQHNQNTERNQTKL 343
Query: 486 GILNMAVEVIMSLEQQVRERNLNPK--AACLRRREEEKAE--DSVGP--KLGH 532
GIL+ AV VI LE+QVR+RN+NPK A R+ +++K + D P + GH
Sbjct: 344 GILHNAVSVITQLEEQVRQRNMNPKVMAGMKRKPDDDKMKMLDDNAPSAQFGH 396
Score = 59 (25.8 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 152 PSTLHLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTIRNPA-AASGVQS-PSLYP 207
PST P + P+ PA +S +S +P P++ + P A S + + P YP
Sbjct: 106 PSTAPAPTSTTDVLELKPTTAPATNSAETSAIVAP-QPLTNLTAPIDAMSSMYTWPQTYP 164
Query: 208 GHNSP 212
G+ P
Sbjct: 165 GYLPP 169
Score = 53 (23.7 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 22/79 (27%), Positives = 32/79 (40%)
Query: 152 PSTLHLPPENMGYMSPSGGPADSSNI--SSITASPLPPMSTIRNPAAASGVQSPSLYPGH 209
P+T+ +P GY P +++I SS PP T + AA + S + P H
Sbjct: 38 PTTIQMPDYWSGYHLNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATS-DIKPIH 96
Query: 210 ----NSPIVQTTGPGPGDT 224
S +T P P T
Sbjct: 97 ATSSTSTTAPSTAPAPTST 115
>UNIPROTKB|F1LUX9 [details] [associations]
symbol:F1LUX9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Gene3D:4.10.280.10 IPI:IPI00371793
Ensembl:ENSRNOT00000040590 Uniprot:F1LUX9
Length = 468
Score = 237 (88.5 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 126/438 (28%), Positives = 182/438 (41%)
Query: 140 STSNHLSQNLYPP--STLHLPPENMGYMS--PSGGPADSSNISSITASPLPPMSTI---- 191
S+S+ ++Q+ Y H+P ++ Y S P+ + S+ S+ S PPMST
Sbjct: 57 SSSSGMNQSGYGGMLGNSHIP-QSSSYCSLHPNDHLSYLSHSSADIISSFPPMSTFYLTG 115
Query: 192 RNPAAASGVQSPSL-YPGHNSPIVQTTGPGP--GDTVGKALASIYPADQXXXXXXXXXXX 248
N + S P+ G + G GD +GK LASIY D
Sbjct: 116 TNHYSTSSCTPPANGTDGIKANRGSEAGGSSQTGDPLGKDLASIYSPDHKNNSFSSNIST 175
Query: 249 XXXXXXXXXAQNSEWVSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEEC 308
A + W SSP++ L I +Q ++I L +H G
Sbjct: 176 HVGSPPSLSAGTAAW------SSPNYKGHLHSLQSQIEDQMM--QSIHVLGNHIVGPSTA 227
Query: 309 LD----DAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSH-AVSSTVGAIPAGYLA 363
+ D +I +G + G + G+LL+ + + V G P G +
Sbjct: 228 VPGGHGDIHGIIGPSHNGAMGSLGSGY----GTLLFSANRHSLMIGVHGEDGVAPRGRHS 283
Query: 364 GLASSSDTDGHIKIENIAN-SSKKRKELT-----IDTKTESICSD-------QMXXXXXX 410
L + +++++ S K LT + + + I SD Q
Sbjct: 284 LLPNQVPVP-QLRVQSATFLDSNPPKTLTEGCQSVSSGSSKIISDDEGNENLQDTKSSEN 342
Query: 411 XXXXXXKGSKR-SRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELG 469
K K +R S+ DE+ P+ A EKE R ANN +E +R+ DINEA KEL
Sbjct: 343 KKLENKKDIKTITRSRSSNNDEEDMTPEQMAECEKEPRIANNAQEHLRVGDINEAFKEL- 401
Query: 470 RMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPK 529
HLK+D+ QTK IL+ L QQVRERNLN KAA L+RREEEK + S P
Sbjct: 402 -----HLKSDQSQTKPLILHY-------LNQQVRERNLNLKAAYLKRREEEK-KSSEPPL 448
Query: 530 L---GHH--LSAVSQHMG 542
L G H + + HMG
Sbjct: 449 LSLAGPHPGMEDAANHMG 466
>ZFIN|ZDB-GENE-000926-1 [details] [associations]
symbol:atoh7 "atonal homolog 7" species:7955 "Danio
rerio" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IMP] [GO:0050769
"positive regulation of neurogenesis" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=IMP] [GO:0043010 "camera-type
eye development" evidence=IMP] [GO:0010842 "retina layer formation"
evidence=IGI;IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0001654 "eye development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-000926-1 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0051726 GO:GO:0050769
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010842
GeneTree:ENSGT00680000099574 GO:GO:0045165 HOVERGEN:HBG096161
KO:K09083 CTD:220202 eggNOG:NOG320395 HOGENOM:HOG000034180
OrthoDB:EOG4N30QJ EMBL:AB049457 EMBL:AL627094 EMBL:BC071520
IPI:IPI00483429 RefSeq:NP_571707.1 UniGene:Dr.82507 HSSP:P61244
ProteinModelPortal:Q8AW52 STRING:Q8AW52 Ensembl:ENSDART00000101328
GeneID:58216 KEGG:dre:58216 InParanoid:Q8AW52 OMA:ERKRMQG
NextBio:20892405 Bgee:Q8AW52 Uniprot:Q8AW52
Length = 134
Score = 107 (42.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/97 (36%), Positives = 51/97 (52%)
Query: 420 KRSRRYC--SSADEDSEDPQT--KAMREKERRQANNVRERIRIRDINEALKELGRMCMAH 475
K R C S +D DS DP+ AMR RR A N RER R++ +N A L R +
Sbjct: 2 KPRRPSCADSGSDSDSRDPEKFESAMR---RRMAANARERKRMQGLNTAFDRL-RKVVPQ 57
Query: 476 LKTDKPQTKLGILNMAVEVIMSLEQQVRE--RNLNPK 510
DK +K L MA+ IM+L + + + R+++P+
Sbjct: 58 WGQDKKLSKYETLQMALSYIMALNRILSDAGRHVDPQ 94
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.128 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 566 509 0.00087 119 3 11 23 0.49 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 71
No. of states in DFA: 612 (65 KB)
Total size of DFA: 294 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 57.08u 0.07s 57.15t Elapsed: 00:00:31
Total cpu time: 57.11u 0.08s 57.19t Elapsed: 00:00:31
Start: Thu Aug 15 12:54:24 2013 End: Thu Aug 15 12:54:55 2013