RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15319
(101 letters)
>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 146
Score = 36.7 bits (84), Expect = 1e-04
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEATGPINFTQLLSLFANRMS-- 62
FAL D D +G + ++L + ++G ++ EV+D++ E N S F MS
Sbjct: 16 FALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQ 75
Query: 63 GGATDDDEVVVAAFRAFDEG--GVINGEKIRGAM 94
+ D ++ ++ AF+ FD+ G+I+ +++ +
Sbjct: 76 LKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL 109
Score = 31.4 bits (70), Expect = 0.008
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 1 MSKGFALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEAT---GPINFTQLLSL 56
+ + F + D + DG++ A+L + ++G+ +TD EVDDML E + G IN Q +L
Sbjct: 85 LLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGEINIQQFAAL 143
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 77
Score = 33.8 bits (77), Expect = 5e-04
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSLFANR 60
FAL D D +G + ++L + ++G ++ EV+D++ E I F++ L+L + +
Sbjct: 16 FALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQ 75
Query: 61 M 61
+
Sbjct: 76 L 76
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 81
Score = 32.6 bits (74), Expect = 0.001
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSLFANR 60
F + DAD G + +L + +G+ T +E+D ++ E +G I+F + L + +
Sbjct: 20 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 79
Query: 61 M 61
M
Sbjct: 80 M 80
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia)
[TaxId: 5888]}
Length = 146
Score = 32.9 bits (74), Expect = 0.002
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSLFANR 60
FAL D D DG + +L + ++G+ T+ E+ DM+ E G I+F + LSL A +
Sbjct: 15 FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARK 74
Query: 61 MSGGATDDDEVVVAAFRAFDEG--GVINGEKIRGAMK 95
M D +E ++ AF+ FD G+I+ ++R M
Sbjct: 75 MKE--QDSEEELIEAFKVFDRDGNGLISAAELRHVMT 109
Score = 27.5 bits (60), Expect = 0.23
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 1 MSKGFALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSL 56
+ + F + D D +G++ A+L + +G+ +TD EVD+M+ EA G IN+ + + +
Sbjct: 84 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 143
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId:
10116]}
Length = 73
Score = 31.9 bits (72), Expect = 0.002
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSLFANR 60
F+L D D DG + +L + ++G+ T+ E+ DM+ E G I+F + L++ A +
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 73
>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 139
Score = 33.0 bits (74), Expect = 0.002
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA------TGPINFTQLLSLFA 58
F L D DG + + + +G+ T+ EV +L + ++F L +
Sbjct: 6 FELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQ 65
Query: 59 NRMSGGATDDDEVVVAAFRAFDE--GGVINGEKIRGAM 94
E + FR FD+ G + G ++R +
Sbjct: 66 AVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVL 103
>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 162
Score = 31.8 bits (71), Expect = 0.006
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 1 MSKGFALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSL 56
++ F + D + DG + +L +I G+ VT+++++D++ ++ G I+F +
Sbjct: 98 LANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE---- 153
Query: 57 FANRMSG 63
F M G
Sbjct: 154 FLKMMEG 160
Score = 27.6 bits (60), Expect = 0.19
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSLFANR 60
F + DAD G + +L + +G+ T +E+D ++ E +G I+F + L + +
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 61 MSGGA-TDDDEVVVAAFRAFDEGG 83
M A +E + FR FD+
Sbjct: 86 MKEDAKGKSEEELANCFRIFDKNA 109
>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding
protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}
Length = 321
Score = 31.9 bits (71), Expect = 0.007
Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 5 FALMDADKDGILGKADLIKIFDTVG-KLVTDKEVDDMLAEA----TGPINFTQLLSL 56
+A D DK G L K ++ K+ + K+ + + + +++ + + L
Sbjct: 259 YAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVML 315
Score = 31.1 bits (69), Expect = 0.013
Identities = 4/48 (8%), Positives = 10/48 (20%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEATGPINFTQ 52
F G DL ++ + + + +
Sbjct: 128 FLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRM 175
>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 156
Score = 30.7 bits (68), Expect = 0.018
Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 1 MSKGFALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSL 56
+S F + D + DG + +L + G+ +T+ ++++++ + G I++ +
Sbjct: 93 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE---- 148
Query: 57 FANRMSG 63
F M G
Sbjct: 149 FLEFMKG 155
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus
(Branchiostoma lanceolatum) [TaxId: 7740]}
Length = 68
Score = 29.4 bits (66), Expect = 0.020
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 3 KGFALMDADKDGILGKADLIKIFDTVG-KLVTDKEVDDMLAEA----TGPINFTQLLSLF 57
+ F + DA+ DG++ + I VG + +TD EV++ + EA G I+ + + L
Sbjct: 6 RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 65
Query: 58 A 58
Sbjct: 66 K 66
>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 141
Score = 29.9 bits (66), Expect = 0.033
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSLFANR 60
F L DAD G + +L +G +E+ M++E TG +NF L++ +
Sbjct: 12 FDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQK 71
Query: 61 MSGGATDDDEVVVAAFRAFDEGG 83
MS D E ++ AF+ FD+
Sbjct: 72 MSE--KDTKEEILKAFKLFDDDE 92
>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica)
[TaxId: 5759]}
Length = 134
Score = 29.7 bits (65), Expect = 0.038
Identities = 4/36 (11%), Positives = 14/36 (38%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDM 40
F +D + DG + ++ + ++ + +
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLI 41
>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}
Length = 65
Score = 28.4 bits (63), Expect = 0.044
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 1 MSKGFALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSL 56
+ + F + D D +G + A+L + +G+ +TD+EVD+M+ EA G +N+ + + +
Sbjct: 5 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 64
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 77
Score = 28.7 bits (64), Expect = 0.044
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 3 KGFALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSLFA 58
K F L D D G + DL ++ +G+ +T++E+ +M+AEA I+ + + +
Sbjct: 13 KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK 72
>gi|148225444|ref|NP_001084009.1|(23-166:170) myosin light chain,
phosphorylatable, fast skeletal muscle [Xenopus laevis]
gi|27371289|gb|AAH41503.1| Mylpf-prov protein
[Xenopus laevis] gi|32450381|gb|AAH53808.1|
Mylpf-prov protein [Xenopus laevis]
gi|45361043|ref|NP_989158.1| myosin, light polypeptide
2, regulatory, cardiac, slow [Xenopus (Silurana)
tropicalis] gi|38494267|gb|AAH61602.1| Fast skeletal
myosin light chain 2 [Xenopus tropicalis]
gi|68342098|gb|AAY90073.1| MLC2 [Xenopus tropicalis]
gi|89272443|emb|CAJ83266.1| fast skeletal myosin light
chain 2 [Xenopus tropicalis] E=1e-68 s/c=1.81 id=86%
cov=100%
Length = 144
Score = 28.4 bits (62), Expect = 0.10
Identities = 21/49 (42%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKL-VTDKEVDDMLAEATGPINFTQ 52
F ++D ++DGI+ K DL F +G++ V ++E+++M+ EA+GPINFT
Sbjct: 13 FTVIDQNRDGIIDKEDLRDTFAAMGRVNVKNEELEEMVKEASGPINFTV 61
Score = 23.4 bits (49), Expect = 5.8
Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 8/68 (11%)
Query: 1 MSKGFALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSL 56
++ F ++D + G + K L ++ T T E+ +M G +++
Sbjct: 79 ITGAFKVLDPEAKGSIKKQFLEELLTTQCDRFTPDEIKNMWTAFPPDVAGNVDYKN---- 134
Query: 57 FANRMSGG 64
++ G
Sbjct: 135 ICYVITHG 142
>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId:
9913]}
Length = 61
Score = 27.3 bits (60), Expect = 0.10
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 3 KGFALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLL 54
K F + D + G + DL + +G+ +TD EVD++L G I++ + +
Sbjct: 5 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop
(Aequipecten irradians) [TaxId: 31199]}
Length = 142
Score = 28.4 bits (62), Expect = 0.11
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEATGPINFTQ 52
F+++D D+DG + K D+ I + +G+ DKE+ ML EA GP+NFT
Sbjct: 13 FSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTM 60
>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD
{Soybean (Glycine max) [TaxId: 3847]}
Length = 182
Score = 28.5 bits (62), Expect = 0.12
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEATGPINFTQLLSLF-ANRMSG 63
F ++D D G + +L VG + + E+ D++ A + T F A +
Sbjct: 16 FKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHL 75
Query: 64 GATDDDEVVVAAFRAFDEGG 83
+ +E +V+AF FD+ G
Sbjct: 76 NKLEREENLVSAFSYFDKDG 95
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 67
Score = 26.8 bits (59), Expect = 0.14
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSLFANR 60
F D +KDG L + ++ T +++ E G +N + S
Sbjct: 7 FEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEKM 66
Query: 61 M 61
+
Sbjct: 67 L 67
>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 146
Score = 27.7 bits (60), Expect = 0.15
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDM 40
F L D G + K L +G T++ V D+
Sbjct: 8 FTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDI 43
>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 75
Score = 26.8 bits (59), Expect = 0.21
Identities = 13/59 (22%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSLFAN 59
F + D + DG + +L +I G+ V +++++D++ ++ G I+F + L +
Sbjct: 15 FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73
>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD
{Soybean (Glycine max) [TaxId: 3847]}
Length = 87
Score = 26.8 bits (59), Expect = 0.22
Identities = 12/63 (19%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 1 MSKGFALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSL 56
+ + F ++D D G + +L VG + + E+ D++ A +G I++ + ++
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 84
Query: 57 FAN 59
+
Sbjct: 85 TVH 87
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human
(Homo sapiens) [TaxId: 9606]}
Length = 83
Score = 26.3 bits (57), Expect = 0.33
Identities = 12/62 (19%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 1 MSKGFALMDADKDGILGKADLIKIFDTVGKLVTD----KEVDDMLAEATGPINFTQLLSL 56
+++ F D K + + + I + +++TD + ++M A G + + LS
Sbjct: 22 ITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSR 81
Query: 57 FA 58
F+
Sbjct: 82 FS 83
>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),
cardiac isoform [TaxId: 9031]}
Length = 81
Score = 25.7 bits (56), Expect = 0.49
Identities = 10/56 (17%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSL 56
F + D + DG + +L + G+ +T+ ++++++ + G I++ + L
Sbjct: 21 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 76
>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein
{Sandworm (Nereis diversicolor) [TaxId: 126592]}
Length = 174
Score = 26.6 bits (57), Expect = 0.51
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDM 40
F +D DKDG + + D + + K K
Sbjct: 12 FNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAK 47
>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces
pombe) [TaxId: 4896]}
Length = 140
Score = 25.4 bits (54), Expect = 1.1
Identities = 16/79 (20%), Positives = 30/79 (37%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEATGPINFTQLLSLFANRMSGG 64
F+L D G + K + + G+ T E+ ++ + ++ Q L +
Sbjct: 11 FSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRPNGFD 70
Query: 65 ATDDDEVVVAAFRAFDEGG 83
D E V F+ FD+
Sbjct: 71 MPGDPEEFVKGFQVFDKDA 89
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 109
Score = 25.2 bits (55), Expect = 1.1
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 1 MSKGFALMDADKDGILGKADL---IKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQL 53
+ K F +DAD G + + +L +K F G+ +TD E L A G I +
Sbjct: 43 VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 102
Query: 54 LSLFA 58
+L
Sbjct: 103 ETLVH 107
>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like
protein {Leishmania major [TaxId: 5664]}
Length = 182
Score = 25.4 bits (54), Expect = 1.2
Identities = 6/36 (16%), Positives = 13/36 (36%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDM 40
F +D D G + +L + G + + +
Sbjct: 24 FRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKL 59
>gi|147905802|ref|NP_001079458.1|(49-190:190) hypothetical protein
LOC379145 [Xenopus laevis] gi|27552841|gb|AAH42934.1|
MGC53335 protein [Xenopus laevis]
gi|148231599|ref|NP_001080252.1| myosin light chain,
alkali, fast skeletal muscle [Xenopus laevis]
gi|602988|gb|AAB00988.1| MLC1f/3f gene product
gi|27371205|gb|AAH41529.1| Myl1-prov protein [Xenopus
laevis] gi|45360563|ref|NP_988954.1| myosin, light
chain 1, alkali; skeletal, fast [Xenopus (Silurana)
tropicalis] gi|38174703|gb|AAH61302.1| Myosin, light
chain 1, alkali; skeletal, fast [Xenopus tropicalis]
gi|58476384|gb|AAH89727.1| Myosin, light chain 1,
alkali; skeletal, fast [Xenopus tropicalis]
gi|89272939|emb|CAJ83178.1| myosin, light polypeptide 1,
alkali; skeletal, fast [Xenopus tropicalis]
gi|197246634|gb|AAI69133.1| Myl1 protein [Xenopus
tropicalis] E=2e-66 s/c=1.79 id=85% cov=99%
Length = 142
Score = 25.3 bits (54), Expect = 1.2
Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 8/99 (8%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA------TGPINFTQLLSLFA 58
F L D D + + + +G+ T+ EV +L I F Q L +
Sbjct: 7 FTLFDRTGDSKIALNQVADVMRALGQNPTNAEVKKILGNPSAEEMNAKRIEFEQFLPMLQ 66
Query: 59 NRMSGGATDDDEVVVAAFRAFDEG--GVINGEKIRGAMK 95
+ E V R FD+ G + G ++R +
Sbjct: 67 ATANNKDQGSFEDFVEGLRVFDKEGNGTVMGAELRHVLA 105
Score = 24.6 bits (52), Expect = 2.6
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 1 MSKGFALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEAT---GPINFTQLL 54
+G + D + +G + A+L + T+G+ + ++EV+ +LA G IN+ +
Sbjct: 80 FVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVESLLAGQEDSNGCINYEAFV 136
>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 176
Score = 24.6 bits (52), Expect = 2.3
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGK 30
F D D +G L +AD K + +
Sbjct: 13 FDRWDFDGNGALERADFEKEAQHIAE 38
>d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta
subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 326
Score = 24.6 bits (52), Expect = 2.5
Identities = 8/29 (27%), Positives = 10/29 (34%)
Query: 54 LSLFANRMSGGATDDDEVVVAAFRAFDEG 82
L L GG D+ A+D G
Sbjct: 17 LGLGTWVTFGGQITDEMAEHLMTLAYDNG 45
>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 99
Score = 24.3 bits (52), Expect = 2.6
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDM 40
F L D + DG+L + +L +F + V D + ++
Sbjct: 22 FILHDINSDGVLDEQELEALFTKELEKVYDPKNEED 57
>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed
(Chenopodium album) [TaxId: 3559]}
Length = 81
Score = 23.3 bits (50), Expect = 3.8
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAEA----TGPINFTQLLSLFANR 60
F D + DG + ++L T+G + T EV M+AE G I+F +
Sbjct: 12 FKRFDTNGDGKISSSELGDALKTLGSV-TPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 70
Query: 61 MS 62
Sbjct: 71 RG 72
>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein
{Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}
Length = 185
Score = 23.8 bits (50), Expect = 4.5
Identities = 5/38 (13%), Positives = 11/38 (28%)
Query: 6 ALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDMLAE 43
+D + DG + D + ++ D
Sbjct: 16 FFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKS 53
>d1ea0a3 d.153.1.1 (A:1-422) Alpha subunit of glutamate synthase,
N-terminal domain {Azospirillum brasilense [TaxId: 192]}
Length = 422
Score = 23.8 bits (51), Expect = 4.8
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 9 DADKDGILGKADLIKIFDTV-GKLVTDKEVDDMLAEA 44
+ G LG ++I + D GKL D+E+ D LA
Sbjct: 378 QVIEKGRLGPGEMIAV-DLQSGKLYRDRELKDHLATL 413
>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein
{Jellyfish (Aequorea aequorea), aequorin [TaxId:
168712]}
Length = 187
Score = 23.8 bits (50), Expect = 5.0
Identities = 8/101 (7%), Positives = 24/101 (23%), Gaps = 22/101 (21%)
Query: 5 FALMDADKDGILGKADLIKIFDTVG--------------KLVTDKEVDDMLAEATGPINF 50
F +D + +G + +++ + K + + ++
Sbjct: 18 FNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDW 77
Query: 51 TQLLSLFANRMS--------GGATDDDEVVVAAFRAFDEGG 83
+ + + T A F D+
Sbjct: 78 PAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQ 118
>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa
(Obelia longissima), obelin [TaxId: 32570]}
Length = 189
Score = 23.8 bits (50), Expect = 5.1
Identities = 3/21 (14%), Positives = 10/21 (47%)
Query: 5 FALMDADKDGILGKADLIKIF 25
F +D + +G + +++
Sbjct: 20 FDFLDINGNGKITLDEIVSKA 40
>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic
enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}
Length = 294
Score = 23.6 bits (51), Expect = 5.8
Identities = 7/33 (21%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Query: 60 RMSGGATDD--DEVVVAAFRAFDEGGVINGEKI 90
R+ G D D + A + + + +I E
Sbjct: 240 RVRGKDYDTLLDNFMKACTKKYGQKTLIQFEDF 272
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis
semifasciata) [TaxId: 30493]}
Length = 109
Score = 23.0 bits (49), Expect = 6.5
Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 1 MSKGFALMDADKDGILGKADLIKI---FDTVGKLVTDKEVDDMLAEA----TGPINFTQL 53
+ + F ++D D+ G + + +L + F G+ + D E +LA G I +
Sbjct: 43 VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEF 102
Query: 54 LSLFAN 59
+ A
Sbjct: 103 AKMVAQ 108
>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 181
Score = 23.1 bits (48), Expect = 7.0
Identities = 5/37 (13%), Positives = 13/37 (35%)
Query: 5 FALMDADKDGILGKADLIKIFDTVGKLVTDKEVDDML 41
F +D D+ G++ +L + + +
Sbjct: 25 FQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSI 61
>d2fzva1 c.23.5.4 (A:1-233) Putative arsenical resistance protein
{Shigella flexneri [TaxId: 623]}
Length = 233
Score = 23.2 bits (49), Expect = 8.2
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 72 VVAAFRAFDEGGVINGEKIRGAMKLV 97
+ AF+ FD G + + V
Sbjct: 176 IAKAFQEFDAAGRMKPSPYYDRIADV 201
>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating
glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon
Thermoproteus tenax [TaxId: 2271]}
Length = 499
Score = 23.4 bits (49), Expect = 8.3
Identities = 4/53 (7%), Positives = 15/53 (28%), Gaps = 8/53 (15%)
Query: 29 GKLVTDKEVDDMLAEATGPINFTQLLSLFANRMSGGATDDDEVVVAAFRAFDE 81
G+ + ++ + + A +S + + + F+
Sbjct: 23 GEWGGSGQEIEVKSPIDL--------ATIAKVISPSREEVERTLDVLFKRGRW 67
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic
enzyme {Human (Homo sapiens) [TaxId: 9606]}
Length = 259
Score = 23.2 bits (50), Expect = 8.3
Identities = 13/76 (17%), Positives = 22/76 (28%), Gaps = 2/76 (2%)
Query: 17 GKADLIKIFDTVGKLVTDKEVDDMLAEATGPINFTQLLSLFANRMSGGATDD--DEVVVA 74
GK L + D+ + + + L+ R DD DE + A
Sbjct: 162 GKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKA 221
Query: 75 AFRAFDEGGVINGEKI 90
+ +I E
Sbjct: 222 ITDRYGRNTLIQFEDF 237
>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId:
10117]}
Length = 109
Score = 22.6 bits (48), Expect = 8.8
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 1 MSKGFALMDADKDGILGKADLIKI---FDTVGKLVTDKEVDDMLAEA----TGPINFTQL 53
+ K F ++D DK G + + +L I F + + ++ KE ++A G I +
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 54 LSLFA 58
+L A
Sbjct: 103 STLVA 107
>d1ofda3 d.153.1.1 (A:1-430) Alpha subunit of glutamate synthase,
N-terminal domain {Synechocystis sp. [TaxId: 1143]}
Length = 430
Score = 23.1 bits (49), Expect = 9.5
Identities = 2/16 (12%), Positives = 8/16 (50%)
Query: 29 GKLVTDKEVDDMLAEA 44
K++ + ++ A+
Sbjct: 397 QKILKNYQIKQQAAQK 412
>d1cmwa2 c.120.1.2 (A:10-173) 5' to 3' exonuclease domain of DNA
polymerase Taq {Thermus aquaticus [TaxId: 271]}
Length = 164
Score = 22.9 bits (48), Expect = 9.5
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 7 LMDADKDGILGKADLIKIFDTVGKLVTDKEV 37
++ ADKD +D I + G L+T +
Sbjct: 129 ILTADKDLYQLLSDRIHVLHPEGYLITPAWL 159
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.139 0.381
Gapped
Lambda K H
0.267 0.0576 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 366,353
Number of extensions: 15718
Number of successful extensions: 132
Number of sequences better than 10.0: 1
Number of HSP's gapped: 124
Number of HSP's successfully gapped: 66
Length of query: 101
Length of database: 2,407,596
Length adjustment: 62
Effective length of query: 39
Effective length of database: 1,556,336
Effective search space: 60697104
Effective search space used: 60697104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.2 bits)