Query psy15324
Match_columns 363
No_of_seqs 301 out of 2245
Neff 7.2
Searched_HMMs 46136
Date Fri Aug 16 18:05:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15324.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15324hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0053 MMT1 Predicted Co/Zn/C 100.0 9.6E-39 2.1E-43 307.3 29.0 243 57-326 37-294 (304)
2 PRK03557 zinc transporter ZitB 100.0 3.7E-36 8E-41 291.0 28.6 242 57-324 43-294 (312)
3 PRK09509 fieF ferrous iron eff 100.0 7E-34 1.5E-38 273.7 28.3 241 57-324 35-289 (299)
4 TIGR01297 CDF cation diffusion 100.0 3.4E-33 7.5E-38 264.1 27.4 240 57-322 14-268 (268)
5 COG1230 CzcD Co/Zn/Cd efflux s 100.0 6.6E-30 1.4E-34 242.0 24.1 240 57-323 46-295 (296)
6 PF01545 Cation_efflux: Cation 100.0 1.1E-27 2.4E-32 228.0 18.7 243 57-324 23-283 (284)
7 KOG1485|consensus 99.9 3.3E-24 7.2E-29 208.6 23.4 243 57-325 139-403 (412)
8 KOG1483|consensus 99.9 2.1E-23 4.7E-28 200.4 19.6 189 134-323 9-371 (404)
9 KOG1484|consensus 99.9 2.6E-21 5.6E-26 183.0 19.5 192 131-324 32-349 (354)
10 KOG1482|consensus 99.9 1.6E-21 3.4E-26 187.0 16.5 193 132-325 71-369 (379)
11 COG0053 MMT1 Predicted Co/Zn/C 99.8 2.7E-19 5.8E-24 172.5 17.8 121 131-251 10-131 (304)
12 COG1230 CzcD Co/Zn/Cd efflux s 99.8 6E-19 1.3E-23 167.5 15.8 120 131-251 19-139 (296)
13 PRK03557 zinc transporter ZitB 99.8 3.3E-18 7.1E-23 165.8 16.5 120 131-251 16-136 (312)
14 PRK09509 fieF ferrous iron eff 99.8 5E-18 1.1E-22 163.6 16.5 121 131-251 8-129 (299)
15 TIGR01297 CDF cation diffusion 99.7 3.9E-16 8.4E-21 147.6 11.2 106 146-251 2-108 (268)
16 PF01545 Cation_efflux: Cation 99.5 5.7E-15 1.2E-19 140.6 4.2 116 136-251 1-117 (284)
17 KOG1485|consensus 99.5 3.4E-13 7.4E-18 132.0 12.5 99 131-229 112-211 (412)
18 COG3965 Predicted Co/Zn/Cd cat 99.3 2.5E-11 5.4E-16 111.7 15.0 120 131-250 17-138 (314)
19 KOG2802|consensus 99.2 4.7E-11 1E-15 114.5 8.7 120 131-250 204-325 (503)
20 KOG1484|consensus 99.1 3.6E-10 7.8E-15 107.8 11.3 169 57-234 59-273 (354)
21 KOG1482|consensus 99.0 1.1E-08 2.3E-13 99.1 13.9 172 57-236 97-295 (379)
22 KOG1483|consensus 98.9 1.2E-10 2.5E-15 113.0 -2.2 75 57-131 225-299 (404)
23 COG3965 Predicted Co/Zn/Cd cat 98.3 6.8E-05 1.5E-09 69.7 17.7 246 57-323 44-310 (314)
24 KOG2802|consensus 97.4 0.0018 3.8E-08 63.2 11.7 146 57-215 231-406 (503)
25 PRK10019 nickel/cobalt efflux 93.5 1.3 2.8E-05 42.5 12.1 27 202-228 252-278 (279)
26 PF03780 Asp23: Asp23 family; 79.7 13 0.00029 29.7 8.1 49 272-321 50-106 (108)
27 PF02535 Zip: ZIP Zinc transpo 79.1 51 0.0011 31.3 13.4 22 63-84 172-193 (317)
28 PRK11469 hypothetical protein; 79.0 49 0.0011 29.8 14.9 47 72-122 45-91 (188)
29 COG2215 ABC-type uncharacteriz 75.5 46 0.001 32.2 11.4 22 201-222 278-299 (303)
30 PRK13262 ureE urease accessory 70.5 5.4 0.00012 37.1 3.9 8 11-18 170-177 (231)
31 PF03824 NicO: High-affinity n 68.6 63 0.0014 30.7 10.9 18 106-123 225-242 (282)
32 COG4531 ZnuA ABC-type Zn2+ tra 65.0 5 0.00011 38.2 2.5 26 298-323 245-270 (318)
33 PF09877 DUF2104: Predicted me 62.8 9.5 0.00021 30.6 3.3 32 178-215 66-97 (99)
34 COG1183 PssA Phosphatidylserin 61.7 84 0.0018 29.4 10.0 74 144-226 46-119 (234)
35 PRK10019 nickel/cobalt efflux 61.5 42 0.00092 32.2 8.1 18 99-116 215-232 (279)
36 PF01810 LysE: LysE type trans 52.7 1.6E+02 0.0034 25.7 13.4 62 59-124 25-86 (191)
37 KOG2877|consensus 52.2 54 0.0012 32.9 7.3 68 143-216 91-164 (389)
38 PRK04201 zinc transporter ZupT 51.1 2.1E+02 0.0046 26.9 11.1 51 73-123 13-63 (265)
39 COG4956 Integral membrane prot 48.6 2.7E+02 0.0059 27.3 13.4 37 194-230 104-143 (356)
40 COG4858 Uncharacterized membra 47.8 2.2E+02 0.0047 25.9 10.9 16 102-117 103-118 (226)
41 PF14535 AMP-binding_C_2: AMP- 44.6 1.5E+02 0.0033 23.1 10.7 65 257-323 10-80 (96)
42 COG1114 BrnQ Branched-chain am 43.8 3.7E+02 0.0081 27.4 14.7 58 88-156 190-247 (431)
43 TIGR02159 PA_CoA_Oxy4 phenylac 42.9 1.3E+02 0.0029 25.9 7.6 50 269-323 17-68 (146)
44 PRK15433 branched-chain amino 42.2 4E+02 0.0087 27.4 12.5 47 201-247 280-326 (439)
45 PF02681 DUF212: Divergent PAP 40.5 2.4E+02 0.0052 24.3 9.0 21 192-212 120-140 (141)
46 COG4035 Predicted membrane pro 39.8 43 0.00093 26.6 3.6 31 178-214 73-103 (108)
47 PRK07946 putative monovalent c 38.2 1.4E+02 0.003 26.4 6.9 28 200-227 75-102 (163)
48 COG4325 Predicted membrane pro 36.8 4.3E+02 0.0094 26.8 10.7 35 194-228 151-185 (464)
49 PF09580 Spore_YhcN_YlaJ: Spor 36.0 1.6E+02 0.0036 25.6 7.3 66 253-324 78-145 (177)
50 TIGR00941 2a6301s03 Multicompo 34.9 1.6E+02 0.0035 24.0 6.4 25 200-224 71-95 (104)
51 TIGR03406 FeS_long_SufT probab 34.3 2.8E+02 0.0061 24.6 8.5 43 281-323 114-157 (174)
52 KOG2693|consensus 34.0 39 0.00085 34.7 3.3 15 59-73 306-320 (453)
53 COG1963 Uncharacterized protei 33.2 2.8E+02 0.006 24.1 7.7 26 194-219 125-150 (153)
54 PF11381 DUF3185: Protein of u 33.0 1.5E+02 0.0033 21.5 5.3 43 207-249 9-54 (59)
55 PF05934 MCLC: Mid-1-related c 31.3 6.3E+02 0.014 26.4 14.3 101 133-234 212-331 (549)
56 PF01883 DUF59: Domain of unkn 30.7 2E+02 0.0044 20.9 6.0 46 269-317 26-72 (72)
57 PF05525 Branch_AA_trans: Bran 30.5 6.1E+02 0.013 26.0 13.7 19 88-109 188-206 (427)
58 PTZ00307 ethanolamine phosphot 28.0 4.8E+02 0.01 26.6 9.9 37 151-187 115-151 (417)
59 PRK08600 putative monovalent c 27.8 2.3E+02 0.005 23.4 6.3 19 203-221 74-92 (113)
60 PRK11118 putative monooxygenas 27.3 2.4E+02 0.0052 22.8 6.0 62 253-319 24-85 (100)
61 PF09877 DUF2104: Predicted me 27.2 59 0.0013 26.1 2.6 23 86-111 75-97 (99)
62 PF06649 DUF1161: Protein of u 26.7 1.1E+02 0.0023 21.7 3.5 29 298-326 3-31 (52)
63 PRK09094 putative monovalent c 26.1 2.9E+02 0.0063 22.9 6.6 24 201-224 76-99 (114)
64 COG4531 ZnuA ABC-type Zn2+ tra 25.9 52 0.0011 31.6 2.4 6 57-62 147-152 (318)
65 TIGR02898 spore_YhcN_YlaJ spor 23.2 3.7E+02 0.0081 23.5 7.1 61 259-323 62-125 (158)
66 PRK10263 DNA translocase FtsK; 22.9 1.3E+03 0.029 27.3 13.5 13 77-89 68-80 (1355)
67 PRK12658 putative monovalent c 22.1 3E+02 0.0065 23.2 6.0 24 202-225 77-100 (125)
68 PF07787 DUF1625: Protein of u 20.5 3.2E+02 0.007 25.4 6.7 28 103-130 188-215 (248)
69 PF06459 RR_TM4-6: Ryanodine R 20.3 1.5E+02 0.0033 28.4 4.4 22 131-152 173-194 (274)
No 1
>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.6e-39 Score=307.29 Aligned_cols=243 Identities=23% Similarity=0.358 Sum_probs=222.8
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT 129 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~ 129 (363)
||.+|++|++|+++|.++|+..+++..++.+ |||+ |+|++++++++++|+++|+.++++++.+++.+.+.
T Consensus 37 gS~ALlADaihs~~D~~~si~~l~~l~~s~kp~d~~HpyGh~---k~E~l~sl~~~~~i~~~g~~i~~~a~~~~~~~~~~ 113 (304)
T COG0053 37 GSVALLADAIHSLSDIVASLIVLIGLRISSKPPDRDHPYGHG---KAETLASLIVSILIFAAGFEILLEAIKRLISPQPV 113 (304)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 7999999999999999999999999999977 9999 99999999999999999999999999999987655
Q ss_pred c---hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHH
Q psy15324 130 H---IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGAL 206 (363)
Q Consensus 130 ~---~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~al 206 (363)
. ....++++++++|++++.|++++|+++||++|.||++|+++|+++++++++|+... .+||+++|+++++
T Consensus 114 ~~~~~~~~v~l~s~~~~~~l~~~~~~~~kk~~S~aL~Ada~h~~sD~~ts~~~lvgl~~~-------~~g~~~lD~i~a~ 186 (304)
T COG0053 114 EPPLLALGVALISIVIKEALYRYLRRVGKKTNSQALIADALHHRSDVLTSLAVLVGLLGS-------LLGWPWLDPLAAL 186 (304)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHHHH-------HhCcHHHHHHHHH
Confidence 5 56777889999999999999999999999999999999999999999999999955 6799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHhHhHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEEE
Q psy15324 207 VNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASA 286 (363)
Q Consensus 207 ~vs~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~ 286 (363)
+++++|++.++++++|++..|||...+++. .++++ +.+.+.|||..++++++| ..|+..++++
T Consensus 187 ~I~~~Il~~~~~~~~~s~~~L~d~~~~~~~---------------~~~i~-~~i~~~~~V~~v~~lr~R-~~G~~~~id~ 249 (304)
T COG0053 187 LISLYILKTGFRLFKESVNELMDAALDPED---------------LEKIR-AIILSVPGVKGVHDLRTR-KSGSRIFIDV 249 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCCCHHH---------------HHHHH-HHHhcCCcceeeecceee-eeCCeEEEEE
Confidence 999999999999999999999994443331 35554 456899999999999995 8999999999
Q ss_pred EEEeC---ChhHHHHHHHHHHHHHHhc-C-CceEEEEeeecCccc
Q psy15324 287 HIRCR---NLSEYMKLAEKVKEFFHNE-G-IHSTTIQPEFVELTE 326 (363)
Q Consensus 287 Hi~v~---~v~~a~~i~~~I~~~lk~~-~-v~~vtI~vEp~~~~~ 326 (363)
|+.++ +++++|+|.+++++.+++. + +.+++||+||....+
T Consensus 250 ~i~v~~~ls~~eah~I~~~ie~~i~~~~~~~~~v~IhveP~~~~~ 294 (304)
T COG0053 250 HIEVDPDLSLEEAHEIADEVEKRIKKEFPKVADVTIHVEPLGEKE 294 (304)
T ss_pred EEEECCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEecCCcccc
Confidence 99998 7999999999999999984 5 999999999987765
No 2
>PRK03557 zinc transporter ZitB; Provisional
Probab=100.00 E-value=3.7e-36 Score=291.03 Aligned_cols=242 Identities=16% Similarity=0.292 Sum_probs=210.1
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT 129 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~ 129 (363)
+|+++.+|.+|+++|+++++..+++..++.+ |||+ |+|++++++.+++|+++++.++++|+++++++.+.
T Consensus 43 gS~AllaDa~hsl~D~~~~~~~l~a~~~s~kp~d~~hpyG~~---r~E~l~al~~~~~l~~~~~~i~~eai~~l~~~~~~ 119 (312)
T PRK03557 43 GSLALLADAGHMLTDAAALLFALLAVQFSRRPPTIRHTFGWL---RLTTLAAFVNAIALVVITILIVWEAIERFRTPRPV 119 (312)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 9999999999999999999999999999976 9999 99999999999999999999999999999988665
Q ss_pred c--hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHH
Q psy15324 130 H--IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALV 207 (363)
Q Consensus 130 ~--~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~al~ 207 (363)
. .....+++++++|++.+++..+ +++.+|.++.||++|.++|++++++++++..+.. .+||+++||+++++
T Consensus 120 ~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~s~~l~a~~~h~~~D~l~s~~vlv~~~~~~------~~g~~~~Dpi~~il 192 (312)
T PRK03557 120 AGGMMMAIAVAGLLANILSFWLLHH-GSEEKNLNVRAAALHVLGDLLGSVGAIIAALIII------WTGWTPADPILSIL 192 (312)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HcCCcchhHHHHHH
Confidence 4 3333445777888877766554 7788999999999999999999999999887652 34888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHhHhHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEEEE
Q psy15324 208 NAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAH 287 (363)
Q Consensus 208 vs~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~H 287 (363)
++++|++.++.++++++..|+|..+++.. ++++++.+.++.|||.+++++|+|+. |+..++++|
T Consensus 193 is~~i~~~~~~l~~~~~~~Lld~~p~~~~---------------~~~i~~~i~~~~~gV~~vh~l~~~~~-G~~~~v~~h 256 (312)
T PRK03557 193 VSVLVLRSAWRLLKESVNELLEGAPVSLD---------------IAELKRRLCREIPEVRNVHHVHVWMV-GEKPVMTLH 256 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCCC---------------HHHHHHHHHhcCCCceeEEEEEEEEe-CCeEEEEEE
Confidence 99999999999999999999996654332 46666555567999999999999986 688999999
Q ss_pred EEeCChhHHHHHHHHHHHHHHh-cCCceEEEEeeecCc
Q psy15324 288 IRCRNLSEYMKLAEKVKEFFHN-EGIHSTTIQPEFVEL 324 (363)
Q Consensus 288 i~v~~v~~a~~i~~~I~~~lk~-~~v~~vtI~vEp~~~ 324 (363)
+.+++..+.+++++++++.+++ +++.++|||+||.++
T Consensus 257 v~v~~~~~~~~i~~~i~~~l~~~~~i~~vtIh~e~~~~ 294 (312)
T PRK03557 257 VQVIPPHDHDALLDRIQDYLMHHYQIEHATIQMEYQPC 294 (312)
T ss_pred EEECCCCCHHHHHHHHHHHHHHhCCCCEEEEEeccCcC
Confidence 9998666789999999999986 599999999999643
No 3
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=100.00 E-value=7e-34 Score=273.72 Aligned_cols=241 Identities=18% Similarity=0.219 Sum_probs=215.8
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT 129 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~ 129 (363)
||+++.+|.+|+++|+++++..+++..++.+ |||+ |+|++++++.++++++.++.++++|++++++|.+.
T Consensus 35 gS~allaDa~hsl~D~~~~~l~l~~~~~s~k~~d~~~pyG~~---r~E~l~~l~~~~~l~~~~~~~~~esi~~l~~~~~~ 111 (299)
T PRK09509 35 GSVSLLAALVDSLVDIAASLTNLLVVRYSLQPADDEHTFGHG---KAESLAALAQSMFISGSALFLFLTGIQHLISPTPM 111 (299)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 8999999999999999999999999999965 9999 99999999999999999999999999999998765
Q ss_pred c---hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHH
Q psy15324 130 H---IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGAL 206 (363)
Q Consensus 130 ~---~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~al 206 (363)
. .....+.+++++|.++++++.+.+++++|.++.||++|.++|+++++++++|+.++ .+||+++|+++++
T Consensus 112 ~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~vl~~~~~~-------~~g~~~~D~i~ai 184 (299)
T PRK09509 112 NDPGVGIIVTLVALICTLILVTFQRWVVRKTQSQAVRADMLHYQSDVMMNGAILLALGLS-------WYGWHRADALFAL 184 (299)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhChHHHHHHHHH
Confidence 4 23455678889999999999999999999999999999999999999999999988 5799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHhHhHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEEE
Q psy15324 207 VNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASA 286 (363)
Q Consensus 207 ~vs~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~ 286 (363)
++++++++.++.++++++..|+|..++++. .++++ +.++++||+.+++++|+|+ .|+..++++
T Consensus 185 ii~~~il~~~~~i~~~~~~~Ll~~~~~~~~---------------~~~I~-~~i~~~~~v~~v~~l~~~~-~G~~~~v~v 247 (299)
T PRK09509 185 GIGIYILYSALRMGYEAVQSLLDRALPDEE---------------RQEII-DIVTSWPGVSGAHDLRTRQ-SGPTRFIQL 247 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCHHH---------------HHHHH-HHHHhCCCCcCceeeeeEe-eCCeEEEEE
Confidence 999999999999999999999996544331 35564 4568899999999999975 677789999
Q ss_pred EEEeC---ChhHHHHHHHHHHHHHHh-cCCceEEEEeeecCc
Q psy15324 287 HIRCR---NLSEYMKLAEKVKEFFHN-EGIHSTTIQPEFVEL 324 (363)
Q Consensus 287 Hi~v~---~v~~a~~i~~~I~~~lk~-~~v~~vtI~vEp~~~ 324 (363)
|+.++ ++++++++.+++|+.+++ ++..+++||+||.+.
T Consensus 248 ~i~v~~~~~~~e~h~i~~~ie~~l~~~~~~~~v~ihveP~~~ 289 (299)
T PRK09509 248 HLEMEDNLPLVQAHMIADQVEQALLRRFPGSDVIIHQDPCSV 289 (299)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCCCC
Confidence 99998 578999999999999987 577789999999653
No 4
>TIGR01297 CDF cation diffusion facilitator family transporter. This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.
Probab=100.00 E-value=3.4e-33 Score=264.13 Aligned_cols=240 Identities=20% Similarity=0.324 Sum_probs=215.1
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT 129 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~ 129 (363)
+|.++.+|.+|++.|+++++..+++..++.+ |||+ |+|++++++.++++++.++.++++|+++++++.+.
T Consensus 14 ~S~allada~~s~~D~~~~~~~l~~~~~~~~~~d~~~pyG~~---r~E~l~~l~~~~~l~~~~~~~~~~si~~l~~~~~~ 90 (268)
T TIGR01297 14 GSLALLADAIHSLSDVAASAIALLALRISRRPADERHPFGHG---RAEILAALLNGLFLVVVALFILYEAIERLINPEPE 90 (268)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 7999999999999999999999999998864 8998 99999999999999999999999999999987633
Q ss_pred c---hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHH
Q psy15324 130 H---IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGAL 206 (363)
Q Consensus 130 ~---~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~al 206 (363)
. ......++++++|.+++.++.+.|++.+|+++.||+.|.++|++++++++++..++ .||++++|+++++
T Consensus 91 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~vli~~~~~-------~~~~~~~D~l~~i 163 (268)
T TIGR01297 91 IDGGTMLIVAIVGLIVNLILALYLHRVGHRLGSLALRAAALHVLSDALSSVGVLIGALLI-------YFGWHWADPIAAL 163 (268)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHhHHHHH
Confidence 3 44556678889999999999999999999999999999999999999999999988 5789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHhHhHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEEE
Q psy15324 207 VNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASA 286 (363)
Q Consensus 207 ~vs~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~ 286 (363)
++++++++.++.++++++..|++..+.++. ++++++ .+++.||+.+++++|+|+.+++..++++
T Consensus 164 ~i~~~i~~~~~~l~~~~~~~Ll~~~~~~~~---------------~~~i~~-~i~~~~~v~~v~~~~~~~~G~~~~~v~~ 227 (268)
T TIGR01297 164 LISLLILYTAFRLLKESINVLLDAAPDEED---------------LEEIKK-AILSIPGVKGVHDLHIWRIGPGKLFLDV 227 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCccc---------------HHHHHH-HHhcCCCcccceEeEEEEcCCCCEEEEE
Confidence 999999999999999999999997654332 466654 4578999999999999887666999999
Q ss_pred EEEeC---ChhHHHHHHHHHHHHHHh-c-CCceEEEEeeec
Q psy15324 287 HIRCR---NLSEYMKLAEKVKEFFHN-E-GIHSTTIQPEFV 322 (363)
Q Consensus 287 Hi~v~---~v~~a~~i~~~I~~~lk~-~-~v~~vtI~vEp~ 322 (363)
|+.++ +++++|++.+++++.+++ + ++.+++||+||.
T Consensus 228 ~v~v~~~~~~~~ah~i~~~i~~~i~~~~~~v~~v~ih~ep~ 268 (268)
T TIGR01297 228 HVVVDPDLDLKQAHDIALEIEREILKRHPGIEHVTIQVEPC 268 (268)
T ss_pred EEEECCCCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 99998 688999999999998765 3 899999999993
No 5
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=6.6e-30 Score=242.04 Aligned_cols=240 Identities=18% Similarity=0.275 Sum_probs=208.7
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT 129 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~ 129 (363)
+|+++++|.+|+++|++.-+..++|..++.+ |||. |+|.|++++-+++++..++.++|||++|+.+|++.
T Consensus 46 ~SlaLLADa~Hml~D~~al~lal~A~~~a~r~~~~~~TfGy~---R~eiLaa~~nav~Li~~s~~I~~EAi~R~~~P~~i 122 (296)
T COG1230 46 GSLALLADALHMLSDALALLLALIAIKLARRPATKRFTFGYK---RLEILAAFLNALLLIVVSLLILWEAIQRLLAPPPI 122 (296)
T ss_pred ccHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999999999965 8888 99999999999999999999999999999999886
Q ss_pred c--hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHH
Q psy15324 130 H--IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALV 207 (363)
Q Consensus 130 ~--~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~al~ 207 (363)
. ....+.++++++|++.++..... ...+.-+.+--+|.++|++.+++++++.... +.+||.++||+.+++
T Consensus 123 ~~~~ml~va~~GL~vN~~~a~ll~~~--~~~~lN~r~a~LHvl~D~Lgsv~vIia~i~i------~~~~w~~~Dpi~si~ 194 (296)
T COG1230 123 HYSGMLVVAIIGLVVNLVSALLLHKG--HEENLNMRGAYLHVLGDALGSVGVIIAAIVI------RFTGWSWLDPILSIV 194 (296)
T ss_pred CccchHHHHHHHHHHHHHHHHHhhCC--CcccchHHHHHHHHHHHHHHHHHHHHHHHHH------HHhCCCccchHHHHH
Confidence 6 56667778888888876655444 3457889999999999999999888877666 267999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHhHhHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEEEE
Q psy15324 208 NAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAH 287 (363)
Q Consensus 208 vs~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~H 287 (363)
++++++..++.+++++.+.|++..|.... ++++++.+ .+.||+.++||+|+|+++++....++|
T Consensus 195 i~~lil~~a~~l~k~s~~iLle~~P~~id---------------~~~~~~~l-~~~~~v~~vhdlHvWsi~~~~~~~t~H 258 (296)
T COG1230 195 IALLILSSAWPLLKESLNILLEGVPEGID---------------IDKVREAL-LRIPGVASVHDLHVWSITGGEHALTLH 258 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccC---------------HHHHHHHH-hcCCCccceeecccCCCCCCceeEEEE
Confidence 99999999999999999999997763322 57887665 599999999999999999999999999
Q ss_pred EEeCChhHHHHHHHHHHHHHHh-cCCceEEEEeeecC
Q psy15324 288 IRCRNLSEYMKLAEKVKEFFHN-EGIHSTTIQPEFVE 323 (363)
Q Consensus 288 i~v~~v~~a~~i~~~I~~~lk~-~~v~~vtI~vEp~~ 323 (363)
++++...+..++.+++++.+.+ +++.++|||+|+..
T Consensus 259 v~v~~~~~~~~~~~~~~~~l~~~~~I~hvTiQ~e~~~ 295 (296)
T COG1230 259 VVVDEVADADAALDQIVRRLLEKYGIEHVTIQLETEG 295 (296)
T ss_pred EEecCccchHHHHHHHHHHHhhhcCcceEEEEecCCC
Confidence 9999555555578887777754 79999999999854
No 6
>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.
Probab=99.95 E-value=1.1e-27 Score=228.02 Aligned_cols=243 Identities=22% Similarity=0.341 Sum_probs=204.9
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT 129 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~ 129 (363)
+|.++.+|.+|+++|++..+..+++..++.+ |||+ |.|++++++.++++++.++.++++++++++++.+.
T Consensus 23 ~S~al~~d~~~sl~d~~~~~~~l~~~~~~~~~~~~~~pfG~~---r~e~l~~~~~~~~l~~~~~~~~~~si~~~~~~~~~ 99 (284)
T PF01545_consen 23 GSLALLADGLHSLADAISLLISLFALRIASKPPDKRYPFGYG---RLEPLAALIVSILLIFLGLFLIVESIQRLISPHEP 99 (284)
T ss_dssp SSS---SCCCHHHHHHHHHHHHHHHHHHHTSS-SSSSSSSST---THHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSSSS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccchh---hhhhHhhhhhhhhHhhhHHHHHHHHhhcccccccc
Confidence 7999999999999999999999999998865 8888 99999999999999999999999999999988544
Q ss_pred c---hhhhHHHHHHHHHHHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhH-HHHH
Q psy15324 130 H---IQKCRLISMFWLTAFFFLVEIVVGYVTN--SMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWAR-AEVL 203 (363)
Q Consensus 130 ~---~~~~~~~~~l~~n~~l~~~~~~~g~~~~--S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~-~d~l 203 (363)
. ......++++++|.+++.+..+.|+..+ |.++.+++.|.+.|.+.+++++++..+.. ..++.+ +|++
T Consensus 100 ~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~~~~~~~~d~~~s~~v~i~~~~~~------~~~~~~~~D~v 173 (284)
T PF01545_consen 100 SPPGIVLIVALVSIIVNLLLAWYLRRVGKRLQRRSPALRADALHSLIDVLSSLAVLISLLLAY------LGPWFWYADPV 173 (284)
T ss_dssp STTTS-THHHHHHHHHHHHHHHHHHHHHHHS---SHHHHHHHHHHHHHTS-SSTS-SSSTSSS------TT-STS-SSHH
T ss_pred hhhhhhhhhhhhhhhHHHHHHHHHhhcccccccccccchhhhhhcccchhHHHHHHHHHHHHH------HHhcccccchh
Confidence 4 2223367889999999999999999998 99999999999999999999999998883 223555 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHhHhHHHHHHHhhCCceeEEEEEEEEEEeCCeEE
Q psy15324 204 GALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRII 283 (363)
Q Consensus 204 ~al~vs~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v 283 (363)
+++++++++++.++.++++++..|++..+.++. .++++ +.+++.||+..++++|+|+++++...
T Consensus 174 ~~l~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~---------------~~~i~-~~i~~~~~v~~v~~~~~~~~g~~~~~ 237 (284)
T PF01545_consen 174 ASLLIALFILYSGYPLIKESIRILLDASPDPEL---------------VEKIR-RIIESVPGVIEVHDLRVWQVGRNKYV 237 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-SHHHHH---------------HHHHH-HHHHHTSS-SEEEEEEEEEETT-EEE
T ss_pred hhhHHHHHHhhhhhhchhhhhcccccccccccc---------------hhHHH-HhhccCCceEeccceEEEEecCCcEE
Confidence 999999999999999999999999997643221 24554 45577999999999999998777999
Q ss_pred EEEEEEeC---ChhHHHHHHHHHHHHHHh-c-CCceEEEEeeecCc
Q psy15324 284 ASAHIRCR---NLSEYMKLAEKVKEFFHN-E-GIHSTTIQPEFVEL 324 (363)
Q Consensus 284 ~~~Hi~v~---~v~~a~~i~~~I~~~lk~-~-~v~~vtI~vEp~~~ 324 (363)
+++|+.++ +++++++++++|++.+++ + ++.+++||+||++.
T Consensus 238 v~i~v~v~~~~~v~~~~~i~~~i~~~l~~~~~~i~~v~I~~~p~~~ 283 (284)
T PF01545_consen 238 VEIHVQVDPDMSVEEAHEIRERIEKRLREKFPGIYDVTIHIEPDEE 283 (284)
T ss_dssp EEEEEEETTTSBHHHHHHHHHHHHHHHHHHSTTCEEEEEEEEECGG
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEEEEEecCC
Confidence 99999998 578999999999999997 4 99999999999764
No 7
>KOG1485|consensus
Probab=99.93 E-value=3.3e-24 Score=208.61 Aligned_cols=243 Identities=11% Similarity=0.137 Sum_probs=211.2
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT 129 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~ 129 (363)
||+++.++++|+++|.+.++..+++.....+ ||++ |.|++..+.++.++..+++.++|+|++.|..|.+.
T Consensus 139 gS~aIiAsavdSl~Dl~s~fvll~s~~~~~k~~~~~YP~G~~---r~EtvG~i~~S~iMa~agv~ii~sSl~~i~~~~~~ 215 (412)
T KOG1485|consen 139 GSMAIIASAVDSLSDLVSGFVLLFSLRAAKKKPTYEYPRGRG---RVETVGLIAVSVIMAMAGVQIIWSSLRLIVGPHAI 215 (412)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhCCCCCC---cccchhHHHHHHHHHHHHHHHHHHhHHhhhccccc
Confidence 9999999999999999999999999999965 7777 99999999999999999999999999988873221
Q ss_pred c-----------hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchh
Q psy15324 130 H-----------IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWA 198 (363)
Q Consensus 130 ~-----------~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~ 198 (363)
. .+.+.+.+++..+++.++..++.++++||..+.|.|+|.++|++++.+.|++.+++ .|.|+
T Consensus 216 ~~~~~~~q~~~~~a~~~i~i~is~~~vk~~l~~~c~~~~ns~iv~a~A~dHr~D~lTn~vaLva~~la-------~~~~~ 288 (412)
T KOG1485|consen 216 GHHHNPSQLIFINALWLIAIMISAKEVKLRLTLYCAIKTNSNIVRANAWDHRNDVLTNSVALVAASLA-------YYYNY 288 (412)
T ss_pred ccccCchhhcccchhhhheehhhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhHHHHHHHHHHHHHHH-------Hhhhh
Confidence 1 12366678888899999999999999999999999999999999999999999999 77889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHhHhHHHHHHHhhCCceeEEEEEEEEEEe
Q psy15324 199 RAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLA 278 (363)
Q Consensus 199 ~~d~l~al~vs~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~v~~i~~~~i~~v~Gv~~v~dlhiw~v~ 278 (363)
++||++|++++++++++++.-..+++..|+|...+.+. ++.+.....+.-+.+..++.++.+ -.
T Consensus 289 ~lDP~gailVS~~ii~t~~~t~~~~i~~Lvg~~a~pe~---------------L~~~~~~~l~~~~~i~~idtv~~y-~~ 352 (412)
T KOG1485|consen 289 WLDPIGAILVSTYIIYTGGRTGLENIKELVGRSAPPEY---------------LEIITYLILQHGKLIKHIDTVRAY-TF 352 (412)
T ss_pred cccchhhhhhheehhhhhhHHHHHHHHHHhCCCCCHHH---------------HHHHHHHHHhhcCccccceeeeee-cc
Confidence 99999999999999999999999999999997443331 344444444555688899999995 46
Q ss_pred CCeEEEEEEEEeC---ChhHHHHHHHHHHHHHHhc-CCceEEEEeeecCcc
Q psy15324 279 GDRIIASAHIRCR---NLSEYMKLAEKVKEFFHNE-GIHSTTIQPEFVELT 325 (363)
Q Consensus 279 g~~~v~~~Hi~v~---~v~~a~~i~~~I~~~lk~~-~v~~vtI~vEp~~~~ 325 (363)
|..+++++|++.+ ++..+|++.+-+++.++.. .+.++.||+|..-..
T Consensus 353 g~~~~Vev~ivl~~~~~l~~ah~i~E~lq~~ie~l~ever~fvh~d~e~~h 403 (412)
T KOG1485|consen 353 GSHYFVEVHIVLDEDLSLSVAHDIGETLQKKIELLPEVERAFVHIDYEFLH 403 (412)
T ss_pred cceEEEEEeeecCCCCccHHHHHHHHHHHHHHhhcchheeeeeecCccccC
Confidence 8899999999998 6889999999999999986 899999999986554
No 8
>KOG1483|consensus
Probab=99.91 E-value=2.1e-23 Score=200.42 Aligned_cols=189 Identities=57% Similarity=0.984 Sum_probs=175.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCchhHHHHHHHHHHHHHH
Q psy15324 134 CRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPK-KWSKNTFGWARAEVLGALVNAVFL 212 (363)
Q Consensus 134 ~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~-~~~~~~~G~~~~d~l~al~vs~~I 212 (363)
..++.-+++.++++..++..|+.++|++|+||++|++.|+++.++++++++.+++ ++.+++|||.|+|.+++|++++|+
T Consensus 9 ~rli~~l~ltiiFfvLEli~gyv~~sLaLiadSfHML~dIiaLivaf~~ik~a~~~~~~k~tyGw~rAEilGalvN~ifl 88 (404)
T KOG1483|consen 9 LRLISVLVLTIIFFVLELITGYVTNSLALIADSFHMLNDIIALIVAFWAIKEAKRIPLQKYTYGWARAEILGALVNAIFL 88 (404)
T ss_pred cceeehHHHHHHHHHhhhhhhcccchHHHHhhHHHHHHHHHHHHHHHHHHHhhhcCcccccCcchhHHHHHhhhhHHHHH
Confidence 4455667788899999999999999999999999999999999999999999998 445899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHh-----------------------------------------
Q psy15324 213 VALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNV----------------------------------------- 251 (363)
Q Consensus 213 ~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~----------------------------------------- 251 (363)
....+.+..|+++|+++|...+++...+.+++++++.|.
T Consensus 89 ~alc~~I~~EA~~R~I~p~~i~~P~~vL~vgi~gLi~Nvlg~~lfhdhg~~h~~~~H~h~hg~~~~~~~~~~~~~~~~~~ 168 (404)
T KOG1483|consen 89 TALCVSILIEAIERIIEPHHIENPILVLYVGIIGLISNVLGLFLFHDHGHDHGHGVHGHSHGGMKGFIGLNLTHLHSHAI 168 (404)
T ss_pred HHHHHHHHHHHHHhhcCCccccCceeeehhhHHHHHHHHHHhheeeccCcccCCcCCCCCCCccccchhhhccCCchhcc
Confidence 999999999999999999999999888889998888886
Q ss_pred --------------------------------------------------------------------------------
Q psy15324 252 -------------------------------------------------------------------------------- 251 (363)
Q Consensus 252 -------------------------------------------------------------------------------- 251 (363)
T Consensus 169 G~~t~~~~~d~~~~~~p~~~l~~~~~~N~~~~s~pv~~~~S~~r~~~~~~~~e~~~~~lnmhGv~LhvL~Dalg~I~Vi~ 248 (404)
T KOG1483|consen 169 GCNTLAKQLDTPLGPGPNAHLSGVMSQNLDGSSTPVQNHGSLSRDDAREKTEEKLDRNLNMHGVFLHVLGDALGSIIVIV 248 (404)
T ss_pred CCcchhhccccCCCCcchhhhccccccCCCCCCCccccCCcccccchhhhhhhhhhccccccceeeeeecccccceEEEE
Confidence
Q ss_pred ----------------------------------------------------HhHHHHHHHhhCCceeEEEEEEEEEEeC
Q psy15324 252 ----------------------------------------------------VDAIQRRLLENVDGVLAVHEFHVWQLAG 279 (363)
Q Consensus 252 ----------------------------------------------------v~~i~~~~i~~v~Gv~~v~dlhiw~v~g 279 (363)
++.+.+++ ..+|||..+||+|+|++.+
T Consensus 249 ~A~~v~~t~~~~~~y~DP~lsi~~~~ii~~sa~pl~k~s~liLLq~~P~~i~ld~v~~~l-~~~~gv~~vh~lhvWqL~~ 327 (404)
T KOG1483|consen 249 SALFVYKTEYSWAYYLDPILSIVLTVIILFSAYPLLKESALILLQTTPGSIDLDIVEKDL-LTVPGVISVHDLHVWQLAG 327 (404)
T ss_pred EEEEEEecceehhhhcCchHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCcccHHHHHHHH-hcCcceeeeeeeeeeeecc
Confidence 66776665 6799999999999999999
Q ss_pred CeEEEEEEEEeCChhHHHHHHHHHHHHHHhcCCceEEEEeeecC
Q psy15324 280 DRIIASAHIRCRNLSEYMKLAEKVKEFFHNEGIHSTTIQPEFVE 323 (363)
Q Consensus 280 ~~~v~~~Hi~v~~v~~a~~i~~~I~~~lk~~~v~~vtI~vEp~~ 323 (363)
..++.++||.++...+..+++++|++.+.++||+.+|||+|..+
T Consensus 328 ~r~IAt~Hi~~~~p~~~~~~a~~ir~~fh~~GIhs~TiqPeF~~ 371 (404)
T KOG1483|consen 328 SRIIATIHIQIQNPKEYMKIAEKIRSYFHDQGIHSTTIQPEFAP 371 (404)
T ss_pred ceEEEEEEEEecCcHHHHHHHHHHHHHHHhcCCcceeeccchhh
Confidence 99999999999988888899999999999999999999999987
No 9
>KOG1484|consensus
Probab=99.88 E-value=2.6e-21 Score=183.00 Aligned_cols=192 Identities=29% Similarity=0.501 Sum_probs=170.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCchhHHHHHHHHHHH
Q psy15324 131 IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS-KNTFGWARAEVLGALVNA 209 (363)
Q Consensus 131 ~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~d~l~al~vs 209 (363)
...+.++..+.+|..++..+.+.|..+||..|++|++|++.|..+.++.|++.+++++|++ +|+|||.|+|.+++++++
T Consensus 32 ~~sr~if~f~llnl~~~fv~l~y~~~snSlgLiSda~hm~FDctal~~gL~a~~is~~~~~~~fsyG~~r~evLagF~n~ 111 (354)
T KOG1484|consen 32 KDSRSIFLFLLLNLAFMFVELFYGSWSNSLGLISDAFHMFFDCTALLAGLYASVISKWPANDKFSYGYGRIEVLAGFVNG 111 (354)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHhhhhHHHHhcCCCccccCcchhHHHHHHHHHHH
Confidence 5678888999999999999999999999999999999999999999999999999999987 799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHh--------------------------------------
Q psy15324 210 VFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNV-------------------------------------- 251 (363)
Q Consensus 210 ~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~-------------------------------------- 251 (363)
+++.+.+++++.|+++||++|++... ...+++++.+.++|.
T Consensus 112 vflvl~a~fi~~Es~eRl~~ppei~t-~rllvVS~~gllvnLvGi~aF~h~~~h~hg~~~~s~~~~h~~~~~~~~~~~~~ 190 (354)
T KOG1484|consen 112 VFLVLIAFFIFSESVERLFDPPEIHT-NRLLVVSVLGLLVNLVGILAFSHGHAHSHGSHHHSSHSGHLALLFHSLLGVWD 190 (354)
T ss_pred HHHHHHHHHHhHHHHHHhcCchhcCC-ceeEEeeHHHHHHHHHHHHHhccccccccCCCCccccccchhccccccccccc
Confidence 99999999999999999999966543 333444455555553
Q ss_pred --------------------------------------------------------------------------------
Q psy15324 252 -------------------------------------------------------------------------------- 251 (363)
Q Consensus 252 -------------------------------------------------------------------------------- 251 (363)
T Consensus 191 ~~~~~~~~i~g~~~~~m~gifLHVLaDtlgSvGviist~Li~~~gw~~aDpicsllIailIf~sv~PL~k~s~~iLLq~t 270 (354)
T KOG1484|consen 191 LHHHAHGHIHGHSHENMPGIFLHVLADTLGSVGVIISTLLIKLFGWMIADPICSLLIAILIFLSVLPLLKYSGKILLQRT 270 (354)
T ss_pred cccccccccCCcccccccchhHHHHHHHhcchHHHHHHHHHHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence
Q ss_pred -------HhHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEEEEEEeCChhHHHHHHHHHHHHHHhcCCceEEEEeeecCc
Q psy15324 252 -------VDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHNEGIHSTTIQPEFVEL 324 (363)
Q Consensus 252 -------v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~Hi~v~~v~~a~~i~~~I~~~lk~~~v~~vtI~vEp~~~ 324 (363)
+++..+++ ...+||.++.+-|+|+++.+.++...|+.+.+..+.+.+.+++.+++...||...|||+|.+..
T Consensus 271 Pp~~~~~l~~cl~~I-s~~~gV~~v~~~hFWt~~~g~~vGtlhl~V~~dade~~vl~~V~~~~~~~gV~~ltvQv~~~~~ 349 (354)
T KOG1484|consen 271 PPHLENSLKQCLRQI-STLDGVTSVQNPHFWTLESGSVVGTLHLQVSSDADEQSVLAHVTRKLEDAGVKDLTVQVEKENS 349 (354)
T ss_pred ChhhhhHHHHHHHHh-hccccceeeccCceeeccCCceEEEEEEEEecCcchhHHHHHHHHHHHhcceeEEEEEEecccc
Confidence 44444554 6789999999999999999999999999999888889999999999999999999999988654
No 10
>KOG1482|consensus
Probab=99.87 E-value=1.6e-21 Score=186.96 Aligned_cols=193 Identities=28% Similarity=0.485 Sum_probs=166.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCchhHHHHHHHHHHHH
Q psy15324 132 QKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS-KNTFGWARAEVLGALVNAV 210 (363)
Q Consensus 132 ~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~d~l~al~vs~ 210 (363)
..+.++++.++.+.+.+.++..|++.||.|+++||.|-++|..+-...+++++.+.+||+ +.+|||.|+|.+++++..+
T Consensus 71 ~~r~L~~~~~l~l~fm~~E~vGg~~a~SLAImTDAaHlLsD~~sf~isl~slw~s~~pa~~r~sfG~~R~Evlgal~Sv~ 150 (379)
T KOG1482|consen 71 AERKLSIAAALCLVFMIGEVVGGYKANSLAIMTDAAHLLSDVASFIISLFSLWLSSRPATKRMSFGFHRAEVLGALVSVL 150 (379)
T ss_pred hhhhHHHHHHHHHHHHHHHHhCCeeccchhhhhcchHHHHHHHHHHHHHHHHHHccCCCCCceecceehHHHHHHHHHHH
Confidence 456778888888999999999999999999999999999999999999999999999999 6799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHh---------------------------------------
Q psy15324 211 FLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNV--------------------------------------- 251 (363)
Q Consensus 211 ~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~--------------------------------------- 251 (363)
.|......++++++.|++.+....+...|++.+.+++++|.
T Consensus 151 ~IW~~tgvLV~~Ai~Rl~s~~~ev~g~~m~i~a~~gv~vNiim~~vL~~~~h~h~H~~~~s~g~~h~~~~~~n~nvraAy 230 (379)
T KOG1482|consen 151 LIWVVTGVLVYEAIQRLLSGDYEVNGGIMLITAAVGVAVNIIMGFVLHQSGHGHSHGGSHSHGHSHDHGEELNLNVRAAF 230 (379)
T ss_pred HHHHhhhhhHHHHHhhhhcCceeecceEEEEEeehhhhhhhhhhhhhcccCCCCCCCCCCCcCcccccccccchHHHHHH
Confidence 99999999999999999997744443343333333333332
Q ss_pred -----------------------------------------------------------------HhHHHHHHHhhCCce
Q psy15324 252 -----------------------------------------------------------------VDAIQRRLLENVDGV 266 (363)
Q Consensus 252 -----------------------------------------------------------------v~~i~~~~i~~v~Gv 266 (363)
.+.++ +.+..++||
T Consensus 231 iHVlGDliQSvGV~iaa~Ii~f~P~~~i~DpICT~~FSiivl~TT~~i~rd~~~iLmE~~P~~~d~~~~~-~~l~~iegV 309 (379)
T KOG1482|consen 231 VHVLGDLIQSVGVLIAALIIYFKPEYKIADPICTFVFSIIVLGTTITILRDILGILMEGTPRNLDFDKVK-KGLLSIEGV 309 (379)
T ss_pred HHHHHHHHHHHHHHhhheeEEecccceecCchhhhhHHHHHHHhHHHHHHHHHHHHhcCCCccCcHHHHH-HHHhhhcce
Confidence 33343 456889999
Q ss_pred eEEEEEEEEEEeCCeEEEEEEEEeCChhHHHHHHHHHHHHHHh-cCCceEEEEeeecCcc
Q psy15324 267 LAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHN-EGIHSTTIQPEFVELT 325 (363)
Q Consensus 267 ~~v~dlhiw~v~g~~~v~~~Hi~v~~v~~a~~i~~~I~~~lk~-~~v~~vtI~vEp~~~~ 325 (363)
+.+||+|+|.++-++...++|+..++..+.+++.+++.+.+++ |++.++|||+||...+
T Consensus 310 ~~VHdLhIWsiTv~k~~ls~Hv~i~~~ad~~~vL~~~~~~i~~~~~~~~vTiQie~~~~~ 369 (379)
T KOG1482|consen 310 KAVHDLHIWSITVGKVALSVHLAIDSEADAEEVLDEARSLIKRRYGISHVTIQIEPYTEE 369 (379)
T ss_pred eEEEEEEEEEEecCceEEEEEEeecCCCCHHHHHHHHHHHHHhhcceEEEEEEecCCccc
Confidence 9999999999999999999999999999999999999999986 6999999999997654
No 11
>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=99.82 E-value=2.7e-19 Score=172.52 Aligned_cols=121 Identities=26% Similarity=0.479 Sum_probs=116.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCchhHHHHHHHHHHH
Q psy15324 131 IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS-KNTFGWARAEVLGALVNA 209 (363)
Q Consensus 131 ~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~d~l~al~vs 209 (363)
...++.++++++|++++..|+.+|..+||.||+|||+|+++|+++++++++|+++++|||| +|||||+|+|++++++++
T Consensus 10 ~~~~~~~~sl~~nl~l~~~K~~~g~~~gS~ALlADaihs~~D~~~si~~l~~l~~s~kp~d~~HpyGh~k~E~l~sl~~~ 89 (304)
T COG0053 10 LVRRAALISLAVNLALALLKLIAGILTGSVALLADAIHSLSDIVASLIVLIGLRISSKPPDRDHPYGHGKAETLASLIVS 89 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHHHH
Confidence 5678889999999999999999999999999999999999999999999999999999999 599999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHh
Q psy15324 210 VFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNV 251 (363)
Q Consensus 210 ~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~ 251 (363)
++|+++|++++++++.+++.|.+++....++.+++++.+++.
T Consensus 90 ~~i~~~g~~i~~~a~~~~~~~~~~~~~~~~~~v~l~s~~~~~ 131 (304)
T COG0053 90 ILIFAAGFEILLEAIKRLISPQPVEPPLLALGVALISIVIKE 131 (304)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHH
Confidence 999999999999999999999998888899999999888876
No 12
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=99.81 E-value=6e-19 Score=167.50 Aligned_cols=120 Identities=38% Similarity=0.616 Sum_probs=115.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCchhHHHHHHHHHHH
Q psy15324 131 IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS-KNTFGWARAEVLGALVNA 209 (363)
Q Consensus 131 ~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~d~l~al~vs 209 (363)
...+++++++.+|..++..++..|..+||.||+||++|+++|+++.++.++++++++||++ +++|||.|+|.+++++++
T Consensus 19 ~~~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~a~r~~~~~~TfGy~R~eiLaa~~na 98 (296)
T COG1230 19 RNERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKLARRPATKRFTFGYKRLEILAAFLNA 98 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHhHHHHHHHHHHH
Confidence 5778899999999999999999999999999999999999999999999999999999997 799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHh
Q psy15324 210 VFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNV 251 (363)
Q Consensus 210 ~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~ 251 (363)
++++..++.+++|+++||++|++.+. ..+++++++++++|.
T Consensus 99 v~Li~~s~~I~~EAi~R~~~P~~i~~-~~ml~va~~GL~vN~ 139 (296)
T COG1230 99 LLLIVVSLLILWEAIQRLLAPPPIHY-SGMLVVAIIGLVVNL 139 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCc-cchHHHHHHHHHHHH
Confidence 99999999999999999999999877 789999999999997
No 13
>PRK03557 zinc transporter ZitB; Provisional
Probab=99.78 E-value=3.3e-18 Score=165.82 Aligned_cols=120 Identities=39% Similarity=0.610 Sum_probs=108.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCchhHHHHHHHHHHH
Q psy15324 131 IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS-KNTFGWARAEVLGALVNA 209 (363)
Q Consensus 131 ~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~d~l~al~vs 209 (363)
...+++++++++|.++++.|+.+|..+||.+|+|||+|+++|++++++++++++.++|||| +|||||+|+|++++++++
T Consensus 16 ~~~r~~~~~~~~n~~l~i~k~~~g~~tgS~AllaDa~hsl~D~~~~~~~l~a~~~s~kp~d~~hpyG~~r~E~l~al~~~ 95 (312)
T PRK03557 16 NNARRLLYAFGVTAGFMLVEVIGGFLSGSLALLADAGHMLTDAAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNA 95 (312)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHH
Confidence 4567788999999999999999999999999999999999999999999999999999998 799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHh
Q psy15324 210 VFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNV 251 (363)
Q Consensus 210 ~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~ 251 (363)
++|+++++.+++|++.+|++|.+... ..++++++.+++++.
T Consensus 96 ~~l~~~~~~i~~eai~~l~~~~~~~~-~~~~~v~~~~~~~~~ 136 (312)
T PRK03557 96 IALVVITILIVWEAIERFRTPRPVAG-GMMMAIAVAGLLANI 136 (312)
T ss_pred HHHHHHHHHHHHHHHHHHcCCccccc-hHHHHHHHHHHHHHH
Confidence 99999999999999999999876553 456566666666664
No 14
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=99.78 E-value=5e-18 Score=163.63 Aligned_cols=121 Identities=23% Similarity=0.381 Sum_probs=111.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCchhHHHHHHHHHHH
Q psy15324 131 IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS-KNTFGWARAEVLGALVNA 209 (363)
Q Consensus 131 ~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~d~l~al~vs 209 (363)
...+++++++++|+++++.|+.+|..+||.+|+|||+|+++|++++++++++.+.+.|||| +|||||+|+|++++++++
T Consensus 8 ~~~~~~~~~~~~n~~l~i~k~~~g~~sgS~allaDa~hsl~D~~~~~l~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~~ 87 (299)
T PRK09509 8 LVSRAAIAATAMASLLLLIKIFAWWYTGSVSLLAALVDSLVDIAASLTNLLVVRYSLQPADDEHTFGHGKAESLAALAQS 87 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHH
Confidence 3457889999999999999999999999999999999999999999999999999999998 799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHh
Q psy15324 210 VFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNV 251 (363)
Q Consensus 210 ~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~ 251 (363)
++|+..++.+++|++.++++|++.+.....+++++++++++.
T Consensus 88 ~~l~~~~~~~~~esi~~l~~~~~~~~~~~~l~~~~~~~v~~~ 129 (299)
T PRK09509 88 MFISGSALFLFLTGIQHLISPTPMNDPGVGIIVTLVALICTL 129 (299)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHHHHH
Confidence 999999999999999999998887766666677777776665
No 15
>TIGR01297 CDF cation diffusion facilitator family transporter. This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.
Probab=99.66 E-value=3.9e-16 Score=147.62 Aligned_cols=106 Identities=41% Similarity=0.645 Sum_probs=96.7
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15324 146 FFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS-KNTFGWARAEVLGALVNAVFLVALCFSITVEAC 224 (363)
Q Consensus 146 l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~d~l~al~vs~~I~~~~~~l~~esi 224 (363)
+++.|+.+|..+||.+|+|||+|+++|++++++++++.+.+.|||| +|||||+|+|+++++++++++++.++.++++++
T Consensus 2 l~~~k~~~g~~~~S~allada~~s~~D~~~~~~~l~~~~~~~~~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~~~~~si 81 (268)
T TIGR01297 2 LMLIKIVGGLLSGSLALLADAIHSLSDVAASAIALLALRISRRPADERHPFGHGRAEILAALLNGLFLVVVALFILYEAI 81 (268)
T ss_pred EEEeehHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999999999998 799999999999999999999999999999999
Q ss_pred HHhhcccccCchhHHHHHHHHHHHHHh
Q psy15324 225 KRFIEVETIHDPWLIVVVGALGLLVNV 251 (363)
Q Consensus 225 ~~Lld~~~~~~~~~~~i~~vi~i~v~~ 251 (363)
.+|++|++++....+++.++++++++.
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~v~~ 108 (268)
T TIGR01297 82 ERLINPEPEIDGGTMLIVAIVGLIVNL 108 (268)
T ss_pred HHHhCCCCcccchhHHHHHHHHHHHHH
Confidence 999998766666677777777777665
No 16
>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.
Probab=99.52 E-value=5.7e-15 Score=140.60 Aligned_cols=116 Identities=29% Similarity=0.555 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCchhHHHHHHHHHHHHHHHH
Q psy15324 136 LISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS-KNTFGWARAEVLGALVNAVFLVA 214 (363)
Q Consensus 136 ~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~d~l~al~vs~~I~~ 214 (363)
+++++++|.+++.+++.+|..+||.+|++||+|++.|+++.++.+++.+.+.+||+ +|||||+|+|++++++.++++++
T Consensus 1 L~i~~~~~~~~~~~~~~~~~~t~S~al~~d~~~sl~d~~~~~~~l~~~~~~~~~~~~~~pfG~~r~e~l~~~~~~~~l~~ 80 (284)
T PF01545_consen 1 LIISLILNLILAVVKIIAGIITGSLALLADGLHSLADAISLLISLFALRIASKPPDKRYPFGYGRLEPLAALIVSILLIF 80 (284)
T ss_dssp -HHHHHHHCCTHHCTTCSS-SSSSS---SCCCHHHHHHHHHHHHHHHHHHHTSS-SSSSSSSSTTHHHHHHHHHHHHHHH
T ss_pred CeeeHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccchhhhhhHhhhhhhhhHhh
Confidence 46788999999999999999999999999999999999999999999999999988 79999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHh
Q psy15324 215 LCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNV 251 (363)
Q Consensus 215 ~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~ 251 (363)
.++.++.+++.+++++.++......+.+++++++++.
T Consensus 81 ~~~~~~~~si~~~~~~~~~~~~~~~l~v~~~~~~~~~ 117 (284)
T PF01545_consen 81 LGLFLIVESIQRLISPHEPSPPGIVLIVALVSIIVNL 117 (284)
T ss_dssp HHHHHHHHHTTTSSSSSSSSTTTS-THHHHHHHHHHH
T ss_pred hHHHHHHHHhhcccccccchhhhhhhhhhhhhhhHHH
Confidence 9999999999999999777666555555677766665
No 17
>KOG1485|consensus
Probab=99.47 E-value=3.4e-13 Score=131.98 Aligned_cols=99 Identities=19% Similarity=0.259 Sum_probs=95.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCchhHHHHHHHHHHH
Q psy15324 131 IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS-KNTFGWARAEVLGALVNA 209 (363)
Q Consensus 131 ~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~d~l~al~vs 209 (363)
...++.++++++|+++++.|.+.|...||.|++||++|+++|+++.++.++.+..+++|++ +||||++|+|+++.++++
T Consensus 112 ~~~~~~~i~l~~Nigl~vaK~~as~~sgS~aIiAsavdSl~Dl~s~fvll~s~~~~~k~~~~~YP~G~~r~EtvG~i~~S 191 (412)
T KOG1485|consen 112 AERRAAWIGLAANIGLAVAKVVASYLSGSMAIIASAVDSLSDLVSGFVLLFSLRAAKKKPTYEYPRGRGRVETVGLIAVS 191 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhCCCCCCcccchhHHHHH
Confidence 4577889999999999999999999999999999999999999999999999999999997 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q psy15324 210 VFLVALCFSITVEACKRFIE 229 (363)
Q Consensus 210 ~~I~~~~~~l~~esi~~Lld 229 (363)
.+|..++.+++++++.++.+
T Consensus 192 ~iMa~agv~ii~sSl~~i~~ 211 (412)
T KOG1485|consen 192 VIMAMAGVQIIWSSLRLIVG 211 (412)
T ss_pred HHHHHHHHHHHHHhHHhhhc
Confidence 99999999999999999998
No 18
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=99.35 E-value=2.5e-11 Score=111.67 Aligned_cols=120 Identities=17% Similarity=0.222 Sum_probs=105.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCC-CCCCchhHHHHHHHHHH
Q psy15324 131 IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSP-KKWS-KNTFGWARAEVLGALVN 208 (363)
Q Consensus 131 ~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~-~~~~-~~~~G~~~~d~l~al~v 208 (363)
.+...+-+|++.+++++.+-+.+|...||.+++-||+.++.|++.+++.|...++-. +|.+ |+|||++-+||+.=.++
T Consensus 17 ~eq~~L~~Si~~tvi~A~~GIi~GL~~gS~~IiFDGvYSl~da~mtllsL~vsrli~~~p~~~RF~~GfwhlEplvL~in 96 (314)
T COG3965 17 NEQLYLRISIAGTVIFAAFGIIWGLLSGSMSIIFDGVYSLIDAGMTLLSLLVSRLIAKDPRDARFPYGFWHLEPLVLAIN 96 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcceEEEeccHHHHHHHHHHHHHHHHHHHhccCCCccccCcchhhhhhhHhhhc
Confidence 566777789999999999999999999999999999999999999998888777766 5556 89999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHH
Q psy15324 209 AVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVN 250 (363)
Q Consensus 209 s~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~ 250 (363)
+.+|...+.+.++.++..|+|+....++...++.+++++.+.
T Consensus 97 g~ll~ll~lyAlinAl~~l~dGGR~v~~~~ai~yt~~s~~~C 138 (314)
T COG3965 97 GTLLALLCLYALINALGSLLDGGREVEPGHAIAYTLVSVTGC 138 (314)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCccccccHHHHHHHHHHHHH
Confidence 999999999999999999999877666666666666665444
No 19
>KOG2802|consensus
Probab=99.20 E-value=4.7e-11 Score=114.50 Aligned_cols=120 Identities=13% Similarity=0.165 Sum_probs=106.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCchhHHHHHHHHHHH
Q psy15324 131 IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS-KNTFGWARAEVLGALVNA 209 (363)
Q Consensus 131 ~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~d~l~al~vs 209 (363)
..-++..+++++|.+.+.+|+.+++.+||.+|.|+++|+++|..++++.++|+..+.+.|| .|||||...-++.+|+.+
T Consensus 204 ~s~rvVatAi~iN~l~~~~Kfg~w~~tgShsmfAEaIHS~aD~~NQ~lLa~Gis~S~q~PD~lhPYGYsnmRyVsSLISg 283 (503)
T KOG2802|consen 204 GSGRVVATAICINGLNCFFKFGAWIYTGSHSMFAEAIHSLADTCNQLLLALGISKSVQTPDPLHPYGYSNMRYVSSLISG 283 (503)
T ss_pred CCCceehhHHHHHHHHHHHHhhHhhhcccHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCcccchhHHHHHHhc
Confidence 4556777899999999999999999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHHHHHH-HHHHHHHhhcccccCchhHHHHHHHHHHHHH
Q psy15324 210 VFLVALCFSI-TVEACKRFIEVETIHDPWLIVVVGALGLLVN 250 (363)
Q Consensus 210 ~~I~~~~~~l-~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~ 250 (363)
+-|+..|..+ ++.++..|+.|+|+++..+...+..-+++..
T Consensus 284 vGIfc~G~GlSiyhGv~gLlhpePi~~l~~ay~il~gSl~~e 325 (503)
T KOG2802|consen 284 VGIFCMGCGLSIYHGVMGLLHPEPIESLLWAYCILAGSLVSE 325 (503)
T ss_pred cceeeecccchhhhccccccCCCCCcchHHHHHHHhhHHHhc
Confidence 9888888776 8999999999999998776665544444333
No 20
>KOG1484|consensus
Probab=99.13 E-value=3.6e-10 Score=107.77 Aligned_cols=169 Identities=13% Similarity=0.170 Sum_probs=135.6
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT 129 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~ 129 (363)
-|+++.+|.+|++=|....+..+++..++.+ ||++ |+|.++++.-+++..+.++.++.|+++||++|...
T Consensus 59 nSlgLiSda~hm~FDctal~~gL~a~~is~~~~~~~fsyG~~---r~evLagF~n~vflvl~a~fi~~Es~eRl~~ppei 135 (354)
T KOG1484|consen 59 NSLGLISDAFHMFFDCTALLAGLYASVISKWPANDKFSYGYG---RIEVLAGFVNGVFLVLIAFFIFSESVERLFDPPEI 135 (354)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHhcCCCccccCcchh---HHHHHHHHHHHHHHHHHHHHHhHHHHHHhcCchhc
Confidence 6899999999999999999999999999976 7887 99999999999999999999999999999998554
Q ss_pred c--hhhhHHHHHHHHHHH-HHHHHHHHHhhhch---------HH---------------------------HHHHHHHHH
Q psy15324 130 H--IQKCRLISMFWLTAF-FFLVEIVVGYVTNS---------MA---------------------------LVADSFHML 170 (363)
Q Consensus 130 ~--~~~~~~~~~l~~n~~-l~~~~~~~g~~~~S---------~a---------------------------L~Ada~h~~ 170 (363)
. ....+...++++|++ ++.++...+...|| .+ +-.=-.|-+
T Consensus 136 ~t~rllvVS~~gllvnLvGi~aF~h~~~h~hg~~~~s~~~~h~~~~~~~~~~~~~~~~~~~~~i~g~~~~~m~gifLHVL 215 (354)
T KOG1484|consen 136 HTNRLLVVSVLGLLVNLVGILAFSHGHAHSHGSHHHSSHSGHLALLFHSLLGVWDLHHHAHGHIHGHSHENMPGIFLHVL 215 (354)
T ss_pred CCceeEEeeHHHHHHHHHHHHHhccccccccCCCCccccccchhccccccccccccccccccccCCcccccccchhHHHH
Confidence 4 222333455555543 34444433333332 00 223457899
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC
Q psy15324 171 SDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIH 234 (363)
Q Consensus 171 ~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~al~vs~~I~~~~~~l~~esi~~Lld~~~~~ 234 (363)
+|.+.++.++++.++-. .+||..+||+++++++++|+.+.+-+++++...|+...|+.
T Consensus 216 aDtlgSvGviist~Li~------~~gw~~aDpicsllIailIf~sv~PL~k~s~~iLLq~tPp~ 273 (354)
T KOG1484|consen 216 ADTLGSVGVIISTLLIK------LFGWMIADPICSLLIAILIFLSVLPLLKYSGKILLQRTPPH 273 (354)
T ss_pred HHHhcchHHHHHHHHHH------hcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChh
Confidence 99999999999988873 68999999999999999999999999999999999855443
No 21
>KOG1482|consensus
Probab=98.96 E-value=1.1e-08 Score=99.10 Aligned_cols=172 Identities=15% Similarity=0.091 Sum_probs=141.1
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT 129 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~ 129 (363)
+|++.+.|..|.++|...=++.+++.++..+ |||. |+|-+.+++-.++|=+....++++|++|++++.-+
T Consensus 97 ~SLAImTDAaHlLsD~~sf~isl~slw~s~~pa~~r~sfG~~---R~Evlgal~Sv~~IW~~tgvLV~~Ai~Rl~s~~~e 173 (379)
T KOG1482|consen 97 NSLAIMTDAAHLLSDVASFIISLFSLWLSSRPATKRMSFGFH---RAEVLGALVSVLLIWVVTGVLVYEAIQRLLSGDYE 173 (379)
T ss_pred cchhhhhcchHHHHHHHHHHHHHHHHHHccCCCCCceeccee---hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCcee
Confidence 8899999999999999888888888877754 9998 99999999999999999999999999999998733
Q ss_pred c---hhhhHHHHHHHHHHHHHHHHHHHH--hhhch---------------HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy15324 130 H---IQKCRLISMFWLTAFFFLVEIVVG--YVTNS---------------MALVADSFHMLSDVAALVVAFLSVKMSPKK 189 (363)
Q Consensus 130 ~---~~~~~~~~~l~~n~~l~~~~~~~g--~~~~S---------------~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~ 189 (363)
. .......+++++|..+....-..+ ...+. ..+-|--+|-+.|++=|+.++++..+..
T Consensus 174 v~g~~m~i~a~~gv~vNiim~~vL~~~~h~h~H~~~~s~g~~h~~~~~~n~nvraAyiHVlGDliQSvGV~iaa~Ii~-- 251 (379)
T KOG1482|consen 174 VNGGIMLITAAVGVAVNIIMGFVLHQSGHGHSHGGSHSHGHSHDHGEELNLNVRAAFVHVLGDLIQSVGVLIAALIIY-- 251 (379)
T ss_pred ecceEEEEEeehhhhhhhhhhhhhcccCCCCCCCCCCCcCcccccccccchHHHHHHHHHHHHHHHHHHHHhhheeEE--
Confidence 2 233444577788888776655542 22222 7888999999999999999999887772
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCch
Q psy15324 190 WSKNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDP 236 (363)
Q Consensus 190 ~~~~~~G~~~~d~l~al~vs~~I~~~~~~l~~esi~~Lld~~~~~~~ 236 (363)
+.=+|..+||+..++-+++.+.+.+.++|+.+..||++.|....
T Consensus 252 ---f~P~~~i~DpICT~~FSiivl~TT~~i~rd~~~iLmE~~P~~~d 295 (379)
T KOG1482|consen 252 ---FKPEYKIADPICTFVFSIIVLGTTITILRDILGILMEGTPRNLD 295 (379)
T ss_pred ---ecccceecCchhhhhHHHHHHHhHHHHHHHHHHHHhcCCCccCc
Confidence 12278899999999999999999999999999999997765443
No 22
>KOG1483|consensus
Probab=98.90 E-value=1.2e-10 Score=112.97 Aligned_cols=75 Identities=56% Similarity=0.925 Sum_probs=72.6
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCccch
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIATTEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPTHI 131 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~~~ 131 (363)
+++||+|.++|+++|++.++.++++++++|+.+|.|+|+.||+.+++++++|++++++++++|-.+||+..|...
T Consensus 225 ~~lnmhGv~LhvL~Dalg~I~Vi~~A~~v~~t~~~~~~y~DP~lsi~~~~ii~~sa~pl~k~s~liLLq~~P~~i 299 (404)
T KOG1483|consen 225 RNLNMHGVFLHVLGDALGSIIVIVSALFVYKTEYSWAYYLDPILSIVLTVIILFSAYPLLKESALILLQTTPGSI 299 (404)
T ss_pred ccccccceeeeeecccccceEEEEEEEEEEecceehhhhcCchHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCcc
Confidence 779999999999999999999999999999999999999999999999999999999999999999999999874
No 23
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=98.30 E-value=6.8e-05 Score=69.71 Aligned_cols=246 Identities=12% Similarity=0.051 Sum_probs=182.4
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH--------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIAT--------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVP 128 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~--------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~ 128 (363)
||+..-=|.+-++.|+.-++..+..+.++.+ ||+. ..||+.-.+-+.+|+..+++.++.|+..++++-.
T Consensus 44 gS~~IiFDGvYSl~da~mtllsL~vsrli~~~p~~~RF~~Gfw---hlEplvL~ing~ll~ll~lyAlinAl~~l~dGGR 120 (314)
T COG3965 44 GSMSIIFDGVYSLIDAGMTLLSLLVSRLIAKDPRDARFPYGFW---HLEPLVLAINGTLLALLCLYALINALGSLLDGGR 120 (314)
T ss_pred cceEEEeccHHHHHHHHHHHHHHHHHHHhccCCCccccCcchh---hhhhhHhhhccHHHHHHHHHHHHHHHHHHhcCCc
Confidence 6777778888999999888887777777762 7776 8999999999999999999999999999998643
Q ss_pred -cc--hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCchhHHHHHH
Q psy15324 129 -TH--IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKW-SKNTFGWARAEVLG 204 (363)
Q Consensus 129 -~~--~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~-~~~~~G~~~~d~l~ 204 (363)
.+ ......+.+..+...+++...+..+...|.-+.+|..-=+.|..-+.++++|...+..-. .++.+=-..+||+.
T Consensus 121 ~v~~~~ai~yt~~s~~~Ca~~~~~~~r~nrr~~s~lIald~kqW~Mst~lS~al~VaF~~a~~l~~T~~a~l~~Y~DPmv 200 (314)
T COG3965 121 EVEPGHAIAYTLVSVTGCAAIAWKLRRLNRRLKSPLIALDTKQWLMSTCLSAALFVAFAAAWLLAGTKFAHLVVYADPMV 200 (314)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhcccCHHH
Confidence 33 344444567777778888888889999999999999999999999999999988775443 23333334589999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc--ccccCchhHHHHHHHHHHHHHhHhHHHHHHHhhCCceeEEEEEEEEEEeCCeE
Q psy15324 205 ALVNAVFLVALCFSITVEACKRFIE--VETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRI 282 (363)
Q Consensus 205 al~vs~~I~~~~~~l~~esi~~Lld--~~~~~~~~~~~i~~vi~i~v~~v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~ 282 (363)
-.++++.++-.=++.++.+.++++. |.+..+. +.... +++.++. |..+.+..-. + -|...
T Consensus 201 laL~~~v~IplPlg~vk~al~eiLlmtP~el~q~----ies~~-------~~~v~k~-----~f~~~~~yvA-r-VGr~l 262 (314)
T COG3965 201 LALVCLVFIPLPLGTVKSALREILLMTPNELQQS----IESHA-------HEIVEKY-----GFPSYHVYVA-R-VGRGL 262 (314)
T ss_pred HHHHHHheeeccHHHHHHHHHHHHhcCcHHHHHH----HHHHH-------HHHHHHh-----cCchHHHHHH-H-hccce
Confidence 9999999999999999999999765 5433221 11111 2222221 2222222212 2 35567
Q ss_pred EEEEEEEeC------ChhHHHHHHHHHHHHHHhc-CCceEEEEeeecC
Q psy15324 283 IASAHIRCR------NLSEYMKLAEKVKEFFHNE-GIHSTTIQPEFVE 323 (363)
Q Consensus 283 v~~~Hi~v~------~v~~a~~i~~~I~~~lk~~-~v~~vtI~vEp~~ 323 (363)
.+|.|.++| ++++.++|+++|.+.+.+. .-..+||-+..++
T Consensus 263 ~IEi~fiip~~~~ar~Ved~d~Irdei~~slg~~g~~rwltvsfT~D~ 310 (314)
T COG3965 263 FIEIHFIIPRESDARNVEDWDDIRDEIGQSLGSLGYERWLTVSFTRDE 310 (314)
T ss_pred EEEEEEEeCCccCCccchhHHHHHHHHHHHhhcCCcCceEEEEEeccc
Confidence 778888775 6889999999999999986 4556777766543
No 24
>KOG2802|consensus
Probab=97.42 E-value=0.0018 Score=63.20 Aligned_cols=146 Identities=17% Similarity=0.205 Sum_probs=92.2
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHH-HHHHHHHhhhccCc
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWP-LLQESALILLQTVP 128 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~-l~~~s~~~l~~~~~ 128 (363)
||..|.+-.+|+++|..+-++..++..-+.. |||+ ...++.+++-++-|+..|-. -+++.++.|++|.|
T Consensus 231 gShsmfAEaIHS~aD~~NQ~lLa~Gis~S~q~PD~lhPYGYs---nmRyVsSLISgvGIfc~G~GlSiyhGv~gLlhpeP 307 (503)
T KOG2802|consen 231 GSHSMFAEAIHSLADTCNQLLLALGISKSVQTPDPLHPYGYS---NMRYVSSLISGVGIFCMGCGLSIYHGVMGLLHPEP 307 (503)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCccc---chhHHHHHHhccceeeecccchhhhccccccCCCC
Confidence 8999999999999999988776665544433 9999 89999999966655544333 35889999999999
Q ss_pred cc---hhhhHHHHHHHH---HHHHHHHHHHHHhhhchHH----------------HHHHHHHHHHHHHHHHHHHHHHHhc
Q psy15324 129 TH---IQKCRLISMFWL---TAFFFLVEIVVGYVTNSMA----------------LVADSFHMLSDVAALVVAFLSVKMS 186 (363)
Q Consensus 129 ~~---~~~~~~~~~l~~---n~~l~~~~~~~g~~~~S~a----------------L~Ada~h~~~D~~ss~~~l~g~~~s 186 (363)
.+ ++..++..+++. .+++++-++.-+-+.+..+ |.-|+. ..+.+ ++++..+.++
T Consensus 308 i~~l~~ay~il~gSl~~eGasllvAi~evkr~Ak~~gmSi~dYV~~~~DPs~nvVl~EDtA-AVtGv---~IAaa~m~ls 383 (503)
T KOG2802|consen 308 IESLLWAYCILAGSLVSEGASLLVAINEVKRNAKAKGMSIYDYVMESRDPSTNVVLLEDTA-AVTGV---IIAAACMGLS 383 (503)
T ss_pred CcchHHHHHHHhhHHHhcchHHHHHHHHHHHHHHHcCCCHHHHHhhcCCCcceEEEecchH-HHHHH---HHHHHHHHHH
Confidence 87 444455445433 4455555544433322222 222221 11111 1222223333
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy15324 187 PKKWSKNTFGWARAEVLGALVNAVFLVAL 215 (363)
Q Consensus 187 ~~~~~~~~~G~~~~d~l~al~vs~~I~~~ 215 (363)
+ ..|-+.+|++++++++.++..+
T Consensus 384 s------~tgnPIyD~~GSivvGaLLGmV 406 (503)
T KOG2802|consen 384 S------ITGNPIYDSLGSIVVGALLGMV 406 (503)
T ss_pred H------hcCCCCccccchHHHHHHHHHH
Confidence 1 3378889999999999887665
No 25
>PRK10019 nickel/cobalt efflux protein RcnA; Provisional
Probab=93.54 E-value=1.3 Score=42.51 Aligned_cols=27 Identities=4% Similarity=0.062 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy15324 202 VLGALVNAVFLVALCFSITVEACKRFI 228 (363)
Q Consensus 202 ~l~al~vs~~I~~~~~~l~~esi~~Ll 228 (363)
..+-.+.+++++..|+.++++.+..++
T Consensus 252 ~~~p~~s~~l~i~~G~~~~~~~~~~~~ 278 (279)
T PRK10019 252 RRAPYFSSLLIGLVGVYMGVHGFMGIM 278 (279)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344477788888888888888887765
No 26
>PF03780 Asp23: Asp23 family; InterPro: IPR005531 This entry represents the alkaline shock protein 23 family. These small proteins are involved in alkaline pH tolerance of Staphylococcus aureus [,].
Probab=79.69 E-value=13 Score=29.66 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=32.2
Q ss_pred EEEEEEe-CCeEEEEEEEEeCChh----HHHHHHHHHHHHHHhc---CCceEEEEeee
Q psy15324 272 FHVWQLA-GDRIIASAHIRCRNLS----EYMKLAEKVKEFFHNE---GIHSTTIQPEF 321 (363)
Q Consensus 272 lhiw~v~-g~~~v~~~Hi~v~~v~----~a~~i~~~I~~~lk~~---~v~~vtI~vEp 321 (363)
+++ +.+ ++...+++++.+..-. -+.++.++|++.+++. .+..+.|+++-
T Consensus 50 v~v-~~~~~~~i~v~l~v~v~~g~~i~~v~~~iq~~V~~~v~~~tg~~v~~V~V~V~~ 106 (108)
T PF03780_consen 50 VKV-EVDEDGGITVDLHVVVEYGVNIPEVAEEIQEKVKEAVEEMTGIEVSEVNVHVED 106 (108)
T ss_pred eEE-EEccCcceEEEEEEEEECCccHHHHHHHHHHHHHHHHHHHHCCeeEEEEEEEEe
Confidence 566 455 7888889999998322 3455556666666654 56677777653
No 27
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=79.10 E-value=51 Score=31.34 Aligned_cols=22 Identities=9% Similarity=0.116 Sum_probs=14.8
Q ss_pred HHHHHHHHhhhHHHHHHHHHHH
Q psy15324 63 GVFLHILADALGSVIVIISATV 84 (363)
Q Consensus 63 ~~~~h~laDa~~s~~~~ia~~~ 84 (363)
..++=.++++++|+++-++..+
T Consensus 172 ~~~~l~~~~~~Hs~~eGl~ig~ 193 (317)
T PF02535_consen 172 RALILLIALSIHSFFEGLAIGA 193 (317)
T ss_pred HHHHHHHHHHhhcchhhhhhhc
Confidence 3556677777777777776633
No 28
>PRK11469 hypothetical protein; Provisional
Probab=78.99 E-value=49 Score=29.78 Aligned_cols=47 Identities=9% Similarity=-0.063 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15324 72 ALGSVIVIISATVIATTEWEYRYHIDPALSLLMVMLILRSVWPLLQESALI 122 (363)
Q Consensus 72 a~~s~~~~ia~~~~~~yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~ 122 (363)
.++.+..+++..+...... ..+.....+-..++++.|.++++|++++
T Consensus 45 ~~q~~m~~~g~~~G~~l~~----~i~~~~~~i~~~lL~~lG~~mi~e~~~~ 91 (188)
T PRK11469 45 AVETLTPLIGWGMGMLASR----FVLEWNHWIAFVLLIFLGGRMIIEGFRG 91 (188)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444444444444443221 2334445556667788899999998764
No 29
>COG2215 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=75.48 E-value=46 Score=32.23 Aligned_cols=22 Identities=5% Similarity=0.134 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy15324 201 EVLGALVNAVFLVALCFSITVE 222 (363)
Q Consensus 201 d~l~al~vs~~I~~~~~~l~~e 222 (363)
-.+.+++.++++++.+...+..
T Consensus 278 ~~~~~l~~gli~l~~g~~~l~~ 299 (303)
T COG2215 278 SYIVSLLGGLIGLYFGLHLLLG 299 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3355566666666666655544
No 30
>PRK13262 ureE urease accessory protein UreE; Provisional
Probab=70.52 E-value=5.4 Score=37.13 Aligned_cols=8 Identities=38% Similarity=0.426 Sum_probs=3.7
Q ss_pred hhhhcCCC
Q psy15324 11 QLVSVGAA 18 (363)
Q Consensus 11 ~~~~~~~~ 18 (363)
++++.+..
T Consensus 170 ~~lf~g~~ 177 (231)
T PRK13262 170 RLLFGGAE 177 (231)
T ss_pred cceecCCC
Confidence 34444444
No 31
>PF03824 NicO: High-affinity nickel-transport protein; InterPro: IPR011541 High affinity nickel transporters are involved in the incorporation of nickel into H2-uptake hydrogenase [, ] and urease [] enzymes and are essential for the expression of catalytically active hydrogenase and urease. Ion uptake is dependent on proton motive force. HoxN in Ralstonia eutropha (Alcaligenes eutrophus) is thought to be an integral membrane protein with seven transmembrane helices []. The family also includes a cobalt transporter. ; GO: 0046872 metal ion binding, 0030001 metal ion transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=68.56 E-value=63 Score=30.67 Aligned_cols=18 Identities=28% Similarity=0.242 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy15324 106 MLILRSVWPLLQESALIL 123 (363)
Q Consensus 106 ~~i~~~~~~l~~~s~~~l 123 (363)
+.+.++.+..+....+.+
T Consensus 225 ~~i~~~~~~~~~~~~~~~ 242 (282)
T PF03824_consen 225 MAITVALFAGLAVLARLL 242 (282)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444443
No 32
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=65.05 E-value=5 Score=38.24 Aligned_cols=26 Identities=12% Similarity=0.254 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHhcCCceEEEEeeecC
Q psy15324 298 KLAEKVKEFFHNEGIHSTTIQPEFVE 323 (363)
Q Consensus 298 ~i~~~I~~~lk~~~v~~vtI~vEp~~ 323 (363)
+-..+|+..|++.+...|+-++...+
T Consensus 245 ~rl~~Ir~~l~e~~a~CvFaEPQF~P 270 (318)
T COG4531 245 KRLAEIRTQLKEQKATCVFAEPQFRP 270 (318)
T ss_pred HHHHHHHHHHHHhCCcEEecCCCCch
Confidence 34456777777777777777665544
No 33
>PF09877 DUF2104: Predicted membrane protein (DUF2104); InterPro: IPR019211 This entry is found in various hypothetical archaeal proteins, has no known function.
Probab=62.83 E-value=9.5 Score=30.58 Aligned_cols=32 Identities=19% Similarity=0.385 Sum_probs=25.2
Q ss_pred HHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy15324 178 VAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVAL 215 (363)
Q Consensus 178 ~~l~g~~~s~~~~~~~~~G~~~~d~l~al~vs~~I~~~ 215 (363)
..++|.....|| ||+|+|.+.++++++++.+.
T Consensus 66 ~~li~~~~GmRP------GYGr~E~~iG~iiA~l~~~l 97 (99)
T PF09877_consen 66 AFLIGFPLGMRP------GYGRIETVIGLIIALLIYLL 97 (99)
T ss_pred HHHHhhhccCCC------CCCeehhhhhHHHHHHHHHH
Confidence 345566666665 99999999999999887764
No 34
>COG1183 PssA Phosphatidylserine synthase [Lipid metabolism]
Probab=61.74 E-value=84 Score=29.39 Aligned_cols=74 Identities=16% Similarity=0.128 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15324 144 AFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVALCFSITVEA 223 (363)
Q Consensus 144 ~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~al~vs~~I~~~~~~l~~es 223 (363)
.++=..--+++|++|.......-+|+++|.++-.+.=.-+... ++... +++.-++..++.+..+.++.+-+
T Consensus 46 ~i~DglDG~VAR~~~~~s~~G~~lDSLaD~VsFgVaPA~l~y~--------~~~~~-~~~~~~~a~~~~~~~alRLArFN 116 (234)
T COG1183 46 LILDGLDGRVARKLNAKSAFGAELDSLADLVSFGVAPALLLYS--------SGLNT-GPLGLLAALLYVLCGALRLARFN 116 (234)
T ss_pred HHHcccchHHHHhcCCcchHHHHHhHHHHHHHhhHHHHHHHHH--------HhccC-CcHHHHHHHHHHHHHHHHHHHcc
Confidence 3333445578999999999999999999998875432222211 12212 45555666666666777666655
Q ss_pred HHH
Q psy15324 224 CKR 226 (363)
Q Consensus 224 i~~ 226 (363)
+..
T Consensus 117 ~~~ 119 (234)
T COG1183 117 VKT 119 (234)
T ss_pred Ccc
Confidence 443
No 35
>PRK10019 nickel/cobalt efflux protein RcnA; Provisional
Probab=61.49 E-value=42 Score=32.23 Aligned_cols=18 Identities=11% Similarity=-0.025 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy15324 99 ALSLLMVMLILRSVWPLL 116 (363)
Q Consensus 99 la~l~i~~~i~~~~~~l~ 116 (363)
+.++-++..+..+++.++
T Consensus 215 vlafslGtaltm~~vgll 232 (279)
T PRK10019 215 VLSFSIGLALTLVTVGVG 232 (279)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333334444444444443
No 36
>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine. A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane
Probab=52.70 E-value=1.6e+02 Score=25.74 Aligned_cols=62 Identities=13% Similarity=0.092 Sum_probs=41.7
Q ss_pred cchhHHHHHHHHhhhHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy15324 59 MNMRGVFLHILADALGSVIVIISATVIATTEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILL 124 (363)
Q Consensus 59 ~~~~~~~~h~laDa~~s~~~~ia~~~~~~yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~ 124 (363)
.++....-..++|++..+....+....... .. ..+.+..++.+++++..|+.++++..+...
T Consensus 25 ~~~~~~~G~~~~~~i~~~~~~~g~~~l~~~-~~---~~~~~l~~~G~~~L~~lg~~~~~~~~~~~~ 86 (191)
T PF01810_consen 25 AGLPVALGAALGDLIYILLAVFGLSALLKS-SP---WLFMILKLLGALYLLYLGYKLLRSKFSSKS 86 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-Ch---HHHHHHHHHHHHHHHHHHHHHHhcccCcch
Confidence 455566667778887766655555443331 23 577778888888888888888887766543
No 37
>KOG2877|consensus
Probab=52.22 E-value=54 Score=32.88 Aligned_cols=68 Identities=19% Similarity=0.097 Sum_probs=46.8
Q ss_pred HHHHHHHHH------HHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q psy15324 143 TAFFFLVEI------VVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVALC 216 (363)
Q Consensus 143 n~~l~~~~~------~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~al~vs~~I~~~~ 216 (363)
.+.+++|+- .-+|++||.+=+.+-+|+--|.+++..+.++..-+. ..|....+.+...+++++.++.+
T Consensus 91 alglFlYqTlDaiDGkQARRTnsSsPLGELFDHG~DS~stvf~~l~~~s~~------~~G~~~~~~~~~~~~~~~~FY~a 164 (389)
T KOG2877|consen 91 ALGLFLYQTLDAIDGKQARRTNSSSPLGELFDHGCDSISTVFVTLAVCSAF------GLGTSPYWLFLFQFASLVLFYLA 164 (389)
T ss_pred HHHHHHHHhcccccchhhccCCCCCCcHhhhcccchhHHHHHHHHHHHHHh------CCCCCcchHHHHHHHHHHHHHHc
Confidence 344555554 478999999999999999999999988887776552 23433345555555555555544
No 38
>PRK04201 zinc transporter ZupT; Provisional
Probab=51.06 E-value=2.1e+02 Score=26.91 Aligned_cols=51 Identities=12% Similarity=0.094 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy15324 73 LGSVIVIISATVIATTEWEYRYHIDPALSLLMVMLILRSVWPLLQESALIL 123 (363)
Q Consensus 73 ~~s~~~~ia~~~~~~yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l 123 (363)
+..+...++.++..+......+....+.++..++++..+...++-|+.+.+
T Consensus 13 l~~~~t~lGal~~~~~~~~~~~~l~~~lafAaGvml~~~~~~LiPea~~~~ 63 (265)
T PRK04201 13 LAGLATGIGSLIAFFGKKPNNRFLSFSLGFAAGVMLYVSFMEILPKALAAL 63 (265)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444443321111235566777788888888888888888764
No 39
>COG4956 Integral membrane protein (PIN domain superfamily) [General function prediction only]
Probab=48.64 E-value=2.7e+02 Score=27.29 Aligned_cols=37 Identities=8% Similarity=0.155 Sum_probs=28.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhcc
Q psy15324 194 TFGWARAEVLGALVNAVFLVALCFSITV---EACKRFIEV 230 (363)
Q Consensus 194 ~~G~~~~d~l~al~vs~~I~~~~~~l~~---esi~~Lld~ 230 (363)
..+++.+-++..+++++++.+.|+.+.. +.+.+|+.+
T Consensus 104 ~~~ip~~~~ii~vi~t~il~y~G~~~~~k~~de~~~l~~~ 143 (356)
T COG4956 104 LLPIPFISTIIPVILTIILAYFGFQLADKKRDEFLRLLNP 143 (356)
T ss_pred hCCccHHHhHHHHHHHHHHHHHhhHHhhhhhHHHHHhcch
Confidence 4577789999999999999999999864 345555554
No 40
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=47.82 E-value=2.2e+02 Score=25.89 Aligned_cols=16 Identities=19% Similarity=0.086 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHH
Q psy15324 102 LLMVMLILRSVWPLLQ 117 (363)
Q Consensus 102 l~i~~~i~~~~~~l~~ 117 (363)
+|.+++.+++|+..+.
T Consensus 103 l~lg~~aLlsgitaff 118 (226)
T COG4858 103 LFLGAMALLSGITAFF 118 (226)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4455555555554433
No 41
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=44.65 E-value=1.5e+02 Score=23.15 Aligned_cols=65 Identities=15% Similarity=0.177 Sum_probs=47.4
Q ss_pred HHHHhhCCceeEEEEEEEEEEeCCeEEEEEEEEeCC-----hhHHHHHHHHHHHHHHhc-CCceEEEEeeecC
Q psy15324 257 RRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRN-----LSEYMKLAEKVKEFFHNE-GIHSTTIQPEFVE 323 (363)
Q Consensus 257 ~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~Hi~v~~-----v~~a~~i~~~I~~~lk~~-~v~~vtI~vEp~~ 323 (363)
..++.++|++..-..+.+ .-.++.-.+.+.+++.. ..+..++.++|++.|++. ++. +.|++-+..
T Consensus 10 e~vl~~~~~~~~~y~i~v-~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv~-~~V~lv~~g 80 (96)
T PF14535_consen 10 EEVLREFPEVSPEYQIVV-TREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGVR-PEVELVPPG 80 (96)
T ss_dssp HHHHCTSTTEEEEEEEEE-EEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS--EEEEEE-TT
T ss_pred HHHHHhCcCCCCcEEEEE-EcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCce-EEEEEECCC
Confidence 345688999987888888 44677888888888873 246788999999999986 775 466665543
No 42
>COG1114 BrnQ Branched-chain amino acid permeases [Amino acid transport and metabolism]
Probab=43.78 E-value=3.7e+02 Score=27.45 Aligned_cols=58 Identities=14% Similarity=0.148 Sum_probs=31.6
Q ss_pred hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCccchhhhHHHHHHHHHHHHHHHHHHHHhh
Q psy15324 88 TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPTHIQKCRLISMFWLTAFFFLVEIVVGYV 156 (363)
Q Consensus 88 yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~~~~~~~~~~~l~~n~~l~~~~~~~g~~ 156 (363)
-||. -.|.+++++.++++. .++++.-...+.+..+.....+++..+.++......++.
T Consensus 190 eGY~---TMDaLAal~FgivIv--------~alk~~g~~~~~~~~~~~~~aglIa~i~La~iY~~L~yl 247 (431)
T COG1114 190 EGYL---TMDALAALAFGIVIV--------NALKSKGVTTKKQIIKYTIKAGLIAAILLALIYLSLFYL 247 (431)
T ss_pred cchH---HHHHHHHHHHHHHHH--------HHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555 678889888877665 455544444444433444444444444454444444443
No 43
>TIGR02159 PA_CoA_Oxy4 phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=42.88 E-value=1.3e+02 Score=25.86 Aligned_cols=50 Identities=10% Similarity=0.244 Sum_probs=32.1
Q ss_pred EEEEEEEEEeCCeEEEEEEEEeC--ChhHHHHHHHHHHHHHHhcCCceEEEEeeecC
Q psy15324 269 VHEFHVWQLAGDRIIASAHIRCR--NLSEYMKLAEKVKEFFHNEGIHSTTIQPEFVE 323 (363)
Q Consensus 269 v~dlhiw~v~g~~~v~~~Hi~v~--~v~~a~~i~~~I~~~lk~~~v~~vtI~vEp~~ 323 (363)
+.++.+ +++... +.+... .-.....+.++|++.|++.|+..+.|++...+
T Consensus 17 Vr~V~v---~gd~V~--VtIt~Ty~gcpa~e~L~~~I~~aL~~~Gv~~V~V~i~~~p 68 (146)
T TIGR02159 17 VREVDV---DGGGVV--VKFTPTYSGCPALEVIRQDIRDAVRALGVEVVEVSTSLDP 68 (146)
T ss_pred eeEEEE---ECCEEE--EEEEeCCCCCchHHHHHHHHHHHHHhcCCCeEEEeEeeCC
Confidence 445555 455433 334443 33445678899999998878888888776654
No 44
>PRK15433 branched-chain amino acid transport system 2 carrier protein BrnQ; Provisional
Probab=42.22 E-value=4e+02 Score=27.36 Aligned_cols=47 Identities=13% Similarity=0.199 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHH
Q psy15324 201 EVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGL 247 (363)
Q Consensus 201 d~l~al~vs~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i 247 (363)
-.+.++++.+..+.++..++....+++-+-.+.....+..+..+++.
T Consensus 280 ~~ll~iiv~lACLTTaIGLi~a~a~~f~~~~~isY~~~v~i~~l~S~ 326 (439)
T PRK15433 280 SFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSM 326 (439)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Confidence 34666777777777777777766666555323333344444444443
No 45
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=40.50 E-value=2.4e+02 Score=24.28 Aligned_cols=21 Identities=19% Similarity=0.354 Sum_probs=18.2
Q ss_pred CCCCchhHHHHHHHHHHHHHH
Q psy15324 192 KNTFGWARAEVLGALVNAVFL 212 (363)
Q Consensus 192 ~~~~G~~~~d~l~al~vs~~I 212 (363)
+-..|+..+|.++|.+.++++
T Consensus 120 KE~lGHtp~EV~~G~llGi~v 140 (141)
T PF02681_consen 120 KELLGHTPLEVFAGALLGIVV 140 (141)
T ss_pred cccCCCCHHHHHHHHHHHHhh
Confidence 457899999999999999875
No 46
>COG4035 Predicted membrane protein [Function unknown]
Probab=39.76 E-value=43 Score=26.64 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=22.8
Q ss_pred HHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q psy15324 178 VAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVA 214 (363)
Q Consensus 178 ~~l~g~~~s~~~~~~~~~G~~~~d~l~al~vs~~I~~ 214 (363)
..++|+....|| ||+|+|++.+-+.++++..
T Consensus 73 ~flig~v~gMRP------GYGR~Etv~Gt~LA~l~wL 103 (108)
T COG4035 73 CFLIGFVLGMRP------GYGRVETVVGTFLAVLLWL 103 (108)
T ss_pred HHHHHHhhccCC------CCceeehhHHHHHHHHHHH
Confidence 456678777776 9999999999665555544
No 47
>PRK07946 putative monovalent cation/H+ antiporter subunit C; Reviewed
Probab=38.23 E-value=1.4e+02 Score=26.38 Aligned_cols=28 Identities=18% Similarity=0.253 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15324 200 AEVLGALVNAVFLVALCFSITVEACKRF 227 (363)
Q Consensus 200 ~d~l~al~vs~~I~~~~~~l~~esi~~L 227 (363)
+=.+.++++++.+......+++...+..
T Consensus 75 ALVLTAIVIg~a~tA~~LaL~~r~y~~~ 102 (163)
T PRK07946 75 AMILTAIVITMGITAFVLALAYRSYRLT 102 (163)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344555566555555555555554443
No 48
>COG4325 Predicted membrane protein [Function unknown]
Probab=36.79 E-value=4.3e+02 Score=26.78 Aligned_cols=35 Identities=9% Similarity=0.018 Sum_probs=26.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy15324 194 TFGWARAEVLGALVNAVFLVALCFSITVEACKRFI 228 (363)
Q Consensus 194 ~~G~~~~d~l~al~vs~~I~~~~~~l~~esi~~Ll 228 (363)
.+|++++=|-++..+++++.+.++.++.-.++.|+
T Consensus 151 ~d~~g~FIp~~avtv~lLlaiisig~~iyfl~~l~ 185 (464)
T COG4325 151 RDGQGAFIPKVAVTVSLLLAIISIGALIYFLHHLM 185 (464)
T ss_pred cCccccceehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777777888888888888888777776666666
No 49
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=35.98 E-value=1.6e+02 Score=25.56 Aligned_cols=66 Identities=18% Similarity=0.213 Sum_probs=45.0
Q ss_pred hHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEEEEEEeCChhHHHHHHHHHHHHHHhc--CCceEEEEeeecCc
Q psy15324 253 DAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHNE--GIHSTTIQPEFVEL 324 (363)
Q Consensus 253 ~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~Hi~v~~v~~a~~i~~~I~~~lk~~--~v~~vtI~vEp~~~ 324 (363)
+++.. .+.+++|| .+..+ -+.++..++-+.+. ..-....++.++|++.+++. .++.|.|--+|.-.
T Consensus 78 ~~i~~-~v~~~~~V---~~A~v-vv~~~~a~Vav~~~-~~~~~~~~i~~~V~~~v~~~~p~~~~V~Vs~D~~~~ 145 (177)
T PF09580_consen 78 DRIAN-RVKKVPGV---EDATV-VVTDDNAYVAVDLD-FNRFNTKKIKKKVEKAVKSADPRIYNVYVSTDPDIF 145 (177)
T ss_pred HHHHH-HHhcCCCc---eEEEE-EEECCEEEEEEEec-ccccchhHHHHHHHHHHHHhCCCccEEEEEcCHHHH
Confidence 44433 34666665 55566 45677777777766 22456678999999999984 66899988877543
No 50
>TIGR00941 2a6301s03 Multicomponent Na+:H+ antiporter, MnhC subunit.
Probab=34.89 E-value=1.6e+02 Score=23.96 Aligned_cols=25 Identities=28% Similarity=0.305 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15324 200 AEVLGALVNAVFLVALCFSITVEAC 224 (363)
Q Consensus 200 ~d~l~al~vs~~I~~~~~~l~~esi 224 (363)
+=.+.++++++........+.+...
T Consensus 71 ALvLTAIVIg~a~tA~~Lal~~r~~ 95 (104)
T TIGR00941 71 ALILTAIVIGFATTALFLVVALRAY 95 (104)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334555555555554444444433
No 51
>TIGR03406 FeS_long_SufT probable FeS assembly SUF system protein SufT. The function is unknown for this protein family, but members are found almost always in operons for the the SUF system of iron-sulfur cluster biosynthesis. The SUF system is present elsewhere on the chromosome for those few species where SUF genes are not adjacent. This family shares this property of association with the SUF system with a related family, TIGR02945. TIGR02945 consists largely of a DUF59 domain (see Pfam family pfam01883), while this protein is about double the length, with a unique N-terminal domain and DUF59 C-terminal domain. A location immediately downstream of the cysteine desulfurase gene sufS in many contexts suggests the gene symbol sufT. Note that some other homologs of this family and of TIGR02945, but no actual members of this family, are found in operons associated with phenylacetic acid (or other ring-hydroxylating) degradation pathways.
Probab=34.34 E-value=2.8e+02 Score=24.63 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=29.4
Q ss_pred eEEEEEEEEeCChhHHHHHHHHHHHHHHhc-CCceEEEEeeecC
Q psy15324 281 RIIASAHIRCRNLSEYMKLAEKVKEFFHNE-GIHSTTIQPEFVE 323 (363)
Q Consensus 281 ~~v~~~Hi~v~~v~~a~~i~~~I~~~lk~~-~v~~vtI~vEp~~ 323 (363)
...+++.+-.+.-.....+.+.+++.+++. ++.++.|.+...+
T Consensus 114 ~V~I~mtLt~p~c~~~~~L~~dV~~aL~~l~gV~~V~V~l~~dp 157 (174)
T TIGR03406 114 RVDIEMTLTAPGCGMGPVLVEDVEDKVLAVPNVDEVEVELVFDP 157 (174)
T ss_pred EEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEEecC
Confidence 444444443344455677889999999885 8998888877654
No 52
>KOG2693|consensus
Probab=34.03 E-value=39 Score=34.74 Aligned_cols=15 Identities=40% Similarity=0.472 Sum_probs=9.3
Q ss_pred cchhHHHHHHHHhhh
Q psy15324 59 MNMRGVFLHILADAL 73 (363)
Q Consensus 59 ~~~~~~~~h~laDa~ 73 (363)
+++.||.+|||+|.+
T Consensus 306 mil~gD~~HNFtDGL 320 (453)
T KOG2693|consen 306 MILAGDGLHNFTDGL 320 (453)
T ss_pred HHHhccccccchhhh
Confidence 555666666666655
No 53
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.15 E-value=2.8e+02 Score=24.06 Aligned_cols=26 Identities=15% Similarity=0.410 Sum_probs=21.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHH
Q psy15324 194 TFGWARAEVLGALVNAVFLVALCFSI 219 (363)
Q Consensus 194 ~~G~~~~d~l~al~vs~~I~~~~~~l 219 (363)
-.|+..+|.++|.++++++.+..+..
T Consensus 125 llGH~p~eV~~G~~lGI~i~~i~~~~ 150 (153)
T COG1963 125 LLGHTPLEVFAGLLLGILIAWIFYAF 150 (153)
T ss_pred HhCCChHHHHHHHHHHHHHHHHHHHH
Confidence 45899999999999999987776544
No 54
>PF11381 DUF3185: Protein of unknown function (DUF3185); InterPro: IPR021521 Some members in this bacterial family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=33.00 E-value=1.5e+02 Score=21.54 Aligned_cols=43 Identities=14% Similarity=0.230 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHH---HHHHHHHhhcccccCchhHHHHHHHHHHHH
Q psy15324 207 VNAVFLVALCFSI---TVEACKRFIEVETIHDPWLIVVVGALGLLV 249 (363)
Q Consensus 207 ~vs~~I~~~~~~l---~~esi~~Lld~~~~~~~~~~~i~~vi~i~v 249 (363)
+.++.+++.|++. +.+.+.+.+.+.+.++..+.++.+.+..++
T Consensus 9 v~GivLl~~G~~~~~S~~s~~s~~~TG~~t~~t~~~ligG~va~iv 54 (59)
T PF11381_consen 9 VGGIVLLYFGYQASDSLGSQVSRAFTGSPTDKTIWYLIGGAVAVIV 54 (59)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHhcCCCCchhHHHHHhHHHHHHH
Confidence 3445555555543 566677888888888877777766665443
No 55
>PF05934 MCLC: Mid-1-related chloride channel (MCLC); InterPro: IPR009231 This entry consists of several Chloride channel CLIC-like proteins, which function as a chloride channel when incorporated in the planar lipid bilayer [].
Probab=31.30 E-value=6.3e+02 Score=26.44 Aligned_cols=101 Identities=8% Similarity=0.032 Sum_probs=49.3
Q ss_pred hhHHHHHHHHHH---HHHHHHHHHHhhhchHHHHHHHHHH----HHHHHHHHHHHHHHHhcCCCCC-CCCCchhHH----
Q psy15324 133 KCRLISMFWLTA---FFFLVEIVVGYVTNSMALVADSFHM----LSDVAALVVAFLSVKMSPKKWS-KNTFGWARA---- 200 (363)
Q Consensus 133 ~~~~~~~l~~n~---~l~~~~~~~g~~~~S~aL~Ada~h~----~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~---- 200 (363)
++.++++|++.+ |+.+||...++...-.+-+ ..++. ..|-..++.-++......+.+. .-+|-.-.+
T Consensus 212 ~R~fvisFLiS~~WNWiyLYK~AfAk~qaelaK~-~~~~~~C~~Km~W~~SL~EWfrss~T~~dDpC~KYyEaLlVnPll 290 (549)
T PF05934_consen 212 RRMFVISFLISFGWNWIYLYKEAFAKHQAELAKM-EPFNEKCAEKMDWSGSLWEWFRSSWTFQDDPCQKYYEALLVNPLL 290 (549)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCcccccchhccHHHHHHHHHHHhcccCCCcHHHHHHHHhhCchh
Confidence 444555555554 6677888777764444311 33333 2444556666655555433321 112222112
Q ss_pred --HHHHHHHHHHHH-----HHHHHHHHHHHHHHhhcccccC
Q psy15324 201 --EVLGALVNAVFL-----VALCFSITVEACKRFIEVETIH 234 (363)
Q Consensus 201 --d~l~al~vs~~I-----~~~~~~l~~esi~~Lld~~~~~ 234 (363)
-|.-++.+++.- +.-....+.|.++.||..-+..
T Consensus 291 ~VpPtKALavT~T~fI~ePLk~IGkgigEfiraLlkeIPvl 331 (549)
T PF05934_consen 291 EVPPTKALAVTFTNFITEPLKHIGKGIGEFIRALLKEIPVL 331 (549)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 333444444332 2223445677788888765543
No 56
>PF01883 DUF59: Domain of unknown function DUF59; InterPro: IPR002744 This family includes prokaryotic proteins of unknown function. The family also includes PhaH (O84984 from SWISSPROT) from Pseudomonas putida. PhaH forms a complex with PhaF (O84982 from SWISSPROT), PhaG (O84983 from SWISSPROT) and PhaI (O84985 from SWISSPROT), which hydroxylates phenylacetic acid to 2-hydroxyphenylacetic acid []. So members of this family may all be components of ring hydroxylating complexes.; PDB: 3LNO_C 3CQ3_A 3CQ2_D 2CU6_B 3CQ1_A 3UX3_B 3UX2_A 1WCJ_A 1UWD_A.
Probab=30.70 E-value=2e+02 Score=20.91 Aligned_cols=46 Identities=17% Similarity=0.346 Sum_probs=28.4
Q ss_pred EEEEEEEEEeCCeEEEEEEEEeCChhHHHHHHHHHHHHHHhc-CCceEEE
Q psy15324 269 VHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHNE-GIHSTTI 317 (363)
Q Consensus 269 v~dlhiw~v~g~~~v~~~Hi~v~~v~~a~~i~~~I~~~lk~~-~v~~vtI 317 (363)
+.++.+ .++...+++.+-.+.-.....+.++|++.|+.. ++..+.|
T Consensus 26 V~~i~i---~~~~V~v~l~l~~~~~~~~~~l~~~i~~~l~~l~gv~~V~V 72 (72)
T PF01883_consen 26 VRDISI---EGGKVSVSLELPTPACPAAEPLREEIREALKALPGVKSVKV 72 (72)
T ss_dssp EEEEEE---CTCEEEEEE--SSTTHTTHHHHHHHHHHHHHTSTT-SEEEE
T ss_pred eeEEEE---ECCEEEEEEEECCCCchHHHHHHHHHHHHHHhCCCCceEeC
Confidence 566666 555554443333334445678999999999975 8877765
No 57
>PF05525 Branch_AA_trans: Branched-chain amino acid transport protein; InterPro: IPR004685 Characterised members of the branched chain Amino Acid:Cation Symporter (LIVCS) family transport all three of the branched chain aliphatic amino acids (leucine (L), isoleucine (I) and valine (V)). They function by a Na+ or H+ symport mechanism and display 12 putative transmembrane helical spanners.; GO: 0015658 branched-chain aliphatic amino acid transmembrane transporter activity, 0015803 branched-chain aliphatic amino acid transport, 0016021 integral to membrane
Probab=30.46 E-value=6.1e+02 Score=25.95 Aligned_cols=19 Identities=16% Similarity=0.422 Sum_probs=15.4
Q ss_pred hccccccccchHHHHHHHHHHH
Q psy15324 88 TEWEYRYHIDPALSLLMVMLIL 109 (363)
Q Consensus 88 yG~~~~~~~E~la~l~i~~~i~ 109 (363)
.||+ -.|.+++++.+.++.
T Consensus 188 eGY~---TMD~laal~Fg~iIi 206 (427)
T PF05525_consen 188 EGYQ---TMDALAALAFGIIII 206 (427)
T ss_pred HHHh---hhhHHHHHHHHHHHH
Confidence 6777 789999998887765
No 58
>PTZ00307 ethanolamine phosphotransferase; Provisional
Probab=28.05 E-value=4.8e+02 Score=26.63 Aligned_cols=37 Identities=14% Similarity=0.058 Sum_probs=32.2
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy15324 151 IVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSP 187 (363)
Q Consensus 151 ~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~ 187 (363)
-..+|++|+.+=+.+-+|+..|.++..+.++++..+.
T Consensus 115 GkqARrt~~sSplGelfDhg~D~~~~~~~~~~~~~a~ 151 (417)
T PTZ00307 115 GKQARRTGTGSPLGELFDHGCDAFLTPFVLLNVSLAT 151 (417)
T ss_pred hHHhhhcCCCCCchhHHHhhhhHHHHHHHHHHHHHHh
Confidence 4578999999999999999999999988888887663
No 59
>PRK08600 putative monovalent cation/H+ antiporter subunit C; Reviewed
Probab=27.81 E-value=2.3e+02 Score=23.39 Aligned_cols=19 Identities=21% Similarity=0.237 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy15324 203 LGALVNAVFLVALCFSITV 221 (363)
Q Consensus 203 l~al~vs~~I~~~~~~l~~ 221 (363)
+.++++++.+...+..+.+
T Consensus 74 LTaIVIg~a~tAl~L~l~~ 92 (113)
T PRK08600 74 LTAIVISFGVTAFFLVLAY 92 (113)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444555444444444433
No 60
>PRK11118 putative monooxygenase; Provisional
Probab=27.27 E-value=2.4e+02 Score=22.83 Aligned_cols=62 Identities=10% Similarity=0.157 Sum_probs=44.5
Q ss_pred hHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEEEEEEeCChhHHHHHHHHHHHHHHhcCCceEEEEe
Q psy15324 253 DAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHNEGIHSTTIQP 319 (363)
Q Consensus 253 ~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~Hi~v~~v~~a~~i~~~I~~~lk~~~v~~vtI~v 319 (363)
.++-.. |++.||.. -+||..+.+....-.-=..++.+.++.-.+.-..+|+++|+..|.+++
T Consensus 24 ~~LA~s-I~~EpGli----WKIWTen~~t~eaGGiYlF~~e~~a~aYl~mH~aRL~~~Gv~~v~~ki 85 (100)
T PRK11118 24 KPLAES-INEEPGFI----WKIWTENEKTQEAGGIYLFEDEASAEAYLEMHTARLKNFGVEEVRAKI 85 (100)
T ss_pred HHHHHH-HhcCCCce----EEEeecCCCCcccceEEEECCHHHHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 344344 47888864 588877666555444445678788888888888899999999988775
No 61
>PF09877 DUF2104: Predicted membrane protein (DUF2104); InterPro: IPR019211 This entry is found in various hypothetical archaeal proteins, has no known function.
Probab=27.17 E-value=59 Score=26.13 Aligned_cols=23 Identities=17% Similarity=0.411 Sum_probs=18.5
Q ss_pred HHhccccccccchHHHHHHHHHHHHH
Q psy15324 86 ATTEWEYRYHIDPALSLLMVMLILRS 111 (363)
Q Consensus 86 ~~yG~~~~~~~E~la~l~i~~~i~~~ 111 (363)
.+-||| |.|...++++++++.+.
T Consensus 75 mRPGYG---r~E~~iG~iiA~l~~~l 97 (99)
T PF09877_consen 75 MRPGYG---RIETVIGLIIALLIYLL 97 (99)
T ss_pred CCCCCC---eehhhhhHHHHHHHHHH
Confidence 448899 99999999888877643
No 62
>PF06649 DUF1161: Protein of unknown function (DUF1161); InterPro: IPR010595 This family consists of several short, hypothetical bacterial proteins of unknown function.
Probab=26.67 E-value=1.1e+02 Score=21.73 Aligned_cols=29 Identities=14% Similarity=0.215 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhcCCceEEEEeeecCccc
Q psy15324 298 KLAEKVKEFFHNEGIHSTTIQPEFVELTE 326 (363)
Q Consensus 298 ~i~~~I~~~lk~~~v~~vtI~vEp~~~~~ 326 (363)
++..+|+.++...|+...|+.+-|.+..+
T Consensus 3 ~lk~eI~~KI~anGV~~ftLeiV~nd~~~ 31 (52)
T PF06649_consen 3 ELKAEIEQKIIANGVSSFTLEIVPNDQAD 31 (52)
T ss_pred HHHHHHHHHHHHcCCCceEEEEeeCcccc
Confidence 57788988888889999999999987664
No 63
>PRK09094 putative monovalent cation/H+ antiporter subunit C; Reviewed
Probab=26.09 E-value=2.9e+02 Score=22.86 Aligned_cols=24 Identities=25% Similarity=0.299 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy15324 201 EVLGALVNAVFLVALCFSITVEAC 224 (363)
Q Consensus 201 d~l~al~vs~~I~~~~~~l~~esi 224 (363)
=.+.++++++.+...+..+.+...
T Consensus 76 LvLTaIVIg~a~tA~~Lal~~r~y 99 (114)
T PRK09094 76 LVLTAIVIGFAMTALFLVVALASR 99 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555555555555555544433
No 64
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=25.91 E-value=52 Score=31.57 Aligned_cols=6 Identities=17% Similarity=0.501 Sum_probs=2.7
Q ss_pred CCcchh
Q psy15324 57 SQMNMR 62 (363)
Q Consensus 57 g~~~~~ 62 (363)
|.++|.
T Consensus 147 G~~d~H 152 (318)
T COG4531 147 GEYDMH 152 (318)
T ss_pred CCcCce
Confidence 444443
No 65
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=23.19 E-value=3.7e+02 Score=23.50 Aligned_cols=61 Identities=20% Similarity=0.198 Sum_probs=41.2
Q ss_pred HHhhCCceeEEEEEEEEEEeCCeEEEEEEEEeC-ChhHHHHHHHHHHHHHHh-c-CCceEEEEeeecC
Q psy15324 259 LLENVDGVLAVHEFHVWQLAGDRIIASAHIRCR-NLSEYMKLAEKVKEFFHN-E-GIHSTTIQPEFVE 323 (363)
Q Consensus 259 ~i~~v~Gv~~v~dlhiw~v~g~~~v~~~Hi~v~-~v~~a~~i~~~I~~~lk~-~-~v~~vtI~vEp~~ 323 (363)
.+.++||| .+..+ -+.++..++-....-+ .-....++.++|.+.+|+ . .+.+|.|--+|+-
T Consensus 62 ~v~~v~~V---~dA~v-vVtg~~A~Vgv~~~~~~~~~~~~~iK~~Va~~Vk~~dp~~~~VyVsaDpd~ 125 (158)
T TIGR02898 62 EAAKVKGV---KDATV-VITGNYAYVGVDLTNGLEGSVTDELKEKVAETVKSTDNRIANVYVSADPDT 125 (158)
T ss_pred HHhcCCCC---ceEEE-EEECCEEEEEEEcCCCcchhhHHHHHHHHHHHHHhhCCCcceEEEEcCHHH
Confidence 34566665 55666 4667777766544333 234467889999999998 5 7889988877753
No 66
>PRK10263 DNA translocase FtsK; Provisional
Probab=22.89 E-value=1.3e+03 Score=27.33 Aligned_cols=13 Identities=8% Similarity=-0.079 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHhc
Q psy15324 77 IVIISATVIATTE 89 (363)
Q Consensus 77 ~~~ia~~~~~~yG 89 (363)
+.+++.++...+|
T Consensus 68 GA~LAD~L~~LFG 80 (1355)
T PRK10263 68 GAWLADTLFFIFG 80 (1355)
T ss_pred HHHHHHHHHHHHh
Confidence 3344444444444
No 67
>PRK12658 putative monovalent cation/H+ antiporter subunit C; Reviewed
Probab=22.07 E-value=3e+02 Score=23.17 Aligned_cols=24 Identities=25% Similarity=0.321 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy15324 202 VLGALVNAVFLVALCFSITVEACK 225 (363)
Q Consensus 202 ~l~al~vs~~I~~~~~~l~~esi~ 225 (363)
.+.++++++.+...+..+++...+
T Consensus 77 vLTAIVIg~a~tA~~L~L~~r~~~ 100 (125)
T PRK12658 77 ILTAIVIGFGLLAFLLVLAYRAYQ 100 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555444433
No 68
>PF07787 DUF1625: Protein of unknown function (DUF1625); InterPro: IPR012430 Sequences making up this family are derived from hypothetical proteins expressed by both prokaryotic and eukaryotic species. The region in question is approximately 250 residues long.
Probab=20.55 E-value=3.2e+02 Score=25.40 Aligned_cols=28 Identities=18% Similarity=0.195 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCccc
Q psy15324 103 LMVMLILRSVWPLLQESALILLQTVPTH 130 (363)
Q Consensus 103 ~i~~~i~~~~~~l~~~s~~~l~~~~~~~ 130 (363)
+++.++++.|+.++..-+..|++..|..
T Consensus 188 ~~G~llmf~G~~~~~~~l~~l~~~~P~l 215 (248)
T PF07787_consen 188 FIGWLLMFIGFFLLFSPLYTLVDWIPLL 215 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcee
Confidence 4666777777777777777776655544
No 69
>PF06459 RR_TM4-6: Ryanodine Receptor TM 4-6; InterPro: IPR009460 The release of Ca2+ ions from intracellular stores is a key step in a wide variety of cellular functions. In striated muscle, the release of Ca2+ from the sarcoplasmic reticulum (SR) leads to muscle contraction. Ca2+ release occurs through large, high-conductance Ca2+ release channels, also known as ryanodine receptors (RyRs) because they bind the plant alkaloid ryanodine with high affinity and specificity []. This region covers TM regions 4-6 of the ryanodine receptor 1 family.; GO: 0005219 ryanodine-sensitive calcium-release channel activity, 0006874 cellular calcium ion homeostasis, 0016021 integral to membrane
Probab=20.33 E-value=1.5e+02 Score=28.42 Aligned_cols=22 Identities=9% Similarity=0.224 Sum_probs=19.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHH
Q psy15324 131 IQKCRLISMFWLTAFFFLVEIV 152 (363)
Q Consensus 131 ~~~~~~~~~l~~n~~l~~~~~~ 152 (363)
....+++++|++|++|..||+.
T Consensus 173 lr~lALflAFaINFILLFYKVs 194 (274)
T PF06459_consen 173 LRFLALFLAFAINFILLFYKVS 194 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 6778899999999999999975
Done!