Query psy15324
Match_columns 363
No_of_seqs 301 out of 2245
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 18:05:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15324.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15324hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3j1z_P YIIP, cation efflux fam 100.0 8.5E-37 2.9E-41 293.5 16.4 245 57-329 37-295 (306)
2 3h90_A Ferrous-iron efflux pum 100.0 1.1E-35 3.8E-40 282.6 19.6 242 56-324 27-282 (283)
3 3j1z_P YIIP, cation efflux fam 99.8 2.4E-19 8.2E-24 171.9 8.7 121 131-251 10-131 (306)
4 3h90_A Ferrous-iron efflux pum 99.8 2.1E-19 7.2E-24 170.3 6.5 120 132-251 2-122 (283)
5 3byp_A CZRB protein; membrane 98.9 6.3E-09 2.2E-13 81.8 10.6 70 252-323 12-87 (94)
6 2zzt_A Putative uncharacterize 98.8 2.2E-08 7.5E-13 80.9 10.5 71 252-324 12-87 (107)
7 2lix_A IMKTX104, potassium cha 64.2 1.9 6.4E-05 24.5 0.0 20 337-358 5-24 (27)
8 2b5b_A Defensin; antibiotic; N 56.1 12 0.00042 22.5 3.1 28 336-363 4-34 (36)
9 4g1u_A Hemin transport system 43.7 87 0.003 29.8 8.8 17 99-115 83-99 (357)
10 3qyh_A CO-type nitrIle hydrata 29.5 19 0.00065 31.9 1.4 22 299-320 154-178 (226)
11 3kog_A Putative pore-forming t 26.3 21 0.00071 32.0 1.1 7 48-54 236-242 (256)
12 3lno_A Putative uncharacterize 23.3 1.6E+02 0.0053 22.5 5.7 52 269-323 35-89 (108)
13 1i25_A Huwentoxin-II, HWTX-II; 20.8 70 0.0024 19.7 2.4 22 339-360 3-25 (37)
14 3cq1_A Putative uncharacterize 20.6 1.1E+02 0.0038 23.1 4.3 28 296-323 57-85 (103)
No 1
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}
Probab=100.00 E-value=8.5e-37 Score=293.49 Aligned_cols=245 Identities=21% Similarity=0.252 Sum_probs=221.0
Q ss_pred CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324 57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT 129 (363)
Q Consensus 57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~ 129 (363)
||++|.+|.+|+++|+++++..+++..++.+ |||+ |+|++++++.+++++..++.++++|+++|++|.+.
T Consensus 37 gS~ALlaDa~hsl~D~~s~~i~l~~~~~s~k~~d~~~pyG~~---R~E~l~al~~~~~l~~~~~~i~~eai~~l~~p~~~ 113 (306)
T 3j1z_P 37 GSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHG---KAEPLAALAQSAFIMGSAFLLLFYGGERLLNPSPV 113 (306)
T ss_dssp SSSCCCTHHHHTTHHHHHHHHHHHHHHHHTSCCCCTTSSCCT---THHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCchh---hHHHHHHHHHHHHHHHHHHHHHHHhhhheecCCCc
Confidence 8999999999999999999999999999965 9999 99999999999999999999999999999998875
Q ss_pred c---hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHH
Q psy15324 130 H---IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGAL 206 (363)
Q Consensus 130 ~---~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~al 206 (363)
. ....++++++++|++++++....+++.+|.++.||++|.++|+++++++++|+.++ .|||+++||++++
T Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~l~s~~vli~~~~~-------~~g~~~~Dpi~ai 186 (306)
T 3j1z_P 114 ENATLGVVVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDLFLNAAVLLALVLS-------QYGWWWADGLFAV 186 (306)
T ss_dssp GGTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHTTCCTTCCCTTSSC-------CSSSCCCHHHHHH
T ss_pred cccccchhhhhhHhhhhHHHHHHHHHhccccCCHHHHHHHHhhcchhhhhhHHHHHHHHH-------HhCcchhhhHHHH
Confidence 5 34566778889999999999999999999999999999999999999999998887 6799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHhHhHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEEE
Q psy15324 207 VNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASA 286 (363)
Q Consensus 207 ~vs~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~ 286 (363)
+++++|++.++.++++++..|+|..++++. .++++ +.+++.|||.+++|+|+|+. |+..++++
T Consensus 187 ~Ia~~I~~~~~~l~~~s~~~Ll~~~~~~~~---------------~~~I~-~~i~~~~~V~~vh~l~~~~~-G~~~~v~~ 249 (306)
T 3j1z_P 187 LIACYIGQQAFDLGYRSIQALLDRELDEDT---------------RQRIK-LIAKEDPRVLGLHDLRTRQA-GKTVFIQF 249 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHH---------------HHHHH-HHHHHSTTBCCCCCBCCEEE-TTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchhH---------------HHHHH-HHHhcCCCcceeeeEEEEEE-CCcEEEEE
Confidence 999999999999999999999997655332 35554 46689999999999999875 67888999
Q ss_pred EEEeC---ChhHHHHHHHHHHHHHHh-cCCceEEEEeeecCcccccc
Q psy15324 287 HIRCR---NLSEYMKLAEKVKEFFHN-EGIHSTTIQPEFVELTEFAE 329 (363)
Q Consensus 287 Hi~v~---~v~~a~~i~~~I~~~lk~-~~v~~vtI~vEp~~~~~~~~ 329 (363)
|+++| ++++++++.+++|+.+++ +++.+++||+||.+. ||++
T Consensus 250 hi~v~~~~sl~eah~i~~~ie~~l~~~~~~~~v~IhveP~~~-ePt~ 295 (306)
T 3j1z_P 250 HLELDGNLSLNEAHSITDTTGLRVKAAFEDAEVIIHQDPVQV-EPTT 295 (306)
T ss_dssp CCEECTTSBHHHHHHHHHHHHHHHHHHSTTCEEEECCEETTS-CCCC
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCCCC-CCCc
Confidence 99998 589999999999999987 699999999999875 4444
No 2
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A
Probab=100.00 E-value=1.1e-35 Score=282.56 Aligned_cols=242 Identities=19% Similarity=0.209 Sum_probs=217.7
Q ss_pred cCCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Q psy15324 56 TSQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVP 128 (363)
Q Consensus 56 ~g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~ 128 (363)
.+|.++.+|.+|+++|.++++..+++..++.+ |||+ |+|++++++.++++++.++.++++|++++++|.+
T Consensus 27 t~S~allaDa~hsl~D~~~~~~~l~~~~~s~~~~d~~~pyG~~---r~E~l~~l~~~~~l~~~~~~i~~eai~~l~~~~~ 103 (283)
T 3h90_A 27 TGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHG---KAESLAALAQSMFISGSALFLFLTGIQHLISPTP 103 (283)
T ss_dssp SSSSCCCSTTTHHHHHHHHHHHHHHHHHHHTCCCCSSCSSCST---THHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSCC
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 38999999999999999999999999999976 9999 9999999999999999999999999999999876
Q ss_pred cc---hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHH
Q psy15324 129 TH---IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGA 205 (363)
Q Consensus 129 ~~---~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~a 205 (363)
.. .....+.+++++|++++++..+.|++.+|.++.||++|.++|+++++++++|+.++ .+||+++||+++
T Consensus 104 ~~~~~~~l~v~~~s~~v~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~~~s~~vli~~~~~-------~~g~~~~D~i~~ 176 (283)
T 3h90_A 104 MTDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLS-------WYGWHRADALFA 176 (283)
T ss_dssp CCCCCCCTHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCCSCSCSSSCSC-------STTSCCSTHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCchHHHHHHH
Confidence 55 35677889999999999999999999999999999999999999999998887765 579999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHhHhHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEE
Q psy15324 206 LVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIAS 285 (363)
Q Consensus 206 l~vs~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~ 285 (363)
++++++|++.++.+++++++.|+|..++++. .+++++ .++++|||.+++|+|+|+. |+..+++
T Consensus 177 i~ia~~i~~~~~~l~~~s~~~Ll~~~~~~~~---------------~~~i~~-~i~~~~~V~~v~~l~~~~~-G~~~~v~ 239 (283)
T 3h90_A 177 LGIGIYILYSALRMGYEAVQSLLDRALPDEE---------------RQEIID-IVTSWPGVSGAHDLRTRQS-GPTRFIQ 239 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCHHH---------------HHHHHH-HHHHSSSCSEEEEEEEEEE-TTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH---------------HHHHHH-HHhcCCCcccceeeEEEEE-CCcEEEE
Confidence 9999999999999999999999997654331 356654 4588999999999999875 6778999
Q ss_pred EEEEeC---ChhHHHHHHHHHHHHHHh-cCCceEEEEeeecCc
Q psy15324 286 AHIRCR---NLSEYMKLAEKVKEFFHN-EGIHSTTIQPEFVEL 324 (363)
Q Consensus 286 ~Hi~v~---~v~~a~~i~~~I~~~lk~-~~v~~vtI~vEp~~~ 324 (363)
+|+.++ ++++++++.+++++.+++ ++..++|||+||.+.
T Consensus 240 ~hv~v~~~~~~~~~~~i~~~i~~~l~~~~~~~~v~ih~ep~~~ 282 (283)
T 3h90_A 240 IHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSV 282 (283)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHHHHHSTTCEEEEEEECSCC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence 999998 578999999999999985 688999999999754
No 3
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}
Probab=99.78 E-value=2.4e-19 Score=171.93 Aligned_cols=121 Identities=16% Similarity=0.275 Sum_probs=113.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCchhHHHHHHHHHHH
Q psy15324 131 IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS-KNTFGWARAEVLGALVNA 209 (363)
Q Consensus 131 ~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~d~l~al~vs 209 (363)
+.+.+.++++++|++++..|+.+|..+||.||+|||+|+++|++++++++++++.+.|||| +|||||+|+|++++++++
T Consensus 10 ~vr~a~~~si~~n~~l~~~k~~ag~~sgS~ALlaDa~hsl~D~~s~~i~l~~~~~s~k~~d~~~pyG~~R~E~l~al~~~ 89 (306)
T 3j1z_P 10 WVKLASRASVATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKAEPLAALAQS 89 (306)
T ss_dssp CSSTTHHHHHHHHHHHTHHHHHTCTTSSSSCCCTHHHHTTHHHHHHHHHHHHHHHHTSCCCCTTSSCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCchhhHHHHHHHHHH
Confidence 6778899999999999999999999999999999999999999999999999999999998 799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHh
Q psy15324 210 VFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNV 251 (363)
Q Consensus 210 ~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~ 251 (363)
++|+..++.+++|++++|++|++++....++++++++++++.
T Consensus 90 ~~l~~~~~~i~~eai~~l~~p~~~~~~~~~~~v~~~~~~~~~ 131 (306)
T 3j1z_P 90 AFIMGSAFLLLFYGGERLLNPSPVENATLGVVVSVVAIVLTL 131 (306)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTCCGGGTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhheecCCCccccccchhhhhhHhhhhH
Confidence 999999999999999999999988777777777777766665
No 4
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A
Probab=99.77 E-value=2.1e-19 Score=170.35 Aligned_cols=120 Identities=22% Similarity=0.365 Sum_probs=112.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCchhHHHHHHHHHHHH
Q psy15324 132 QKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS-KNTFGWARAEVLGALVNAV 210 (363)
Q Consensus 132 ~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~-~~~~G~~~~d~l~al~vs~ 210 (363)
.++++++++++|++++..|+.+|..+||.+|+|||+|+++|++++++++++.+.++|||| +|||||+|+|+++++++++
T Consensus 2 ~~r~~~~~~~~n~~l~~~k~~~g~~t~S~allaDa~hsl~D~~~~~~~l~~~~~s~~~~d~~~pyG~~r~E~l~~l~~~~ 81 (283)
T 3h90_A 2 VSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSM 81 (283)
T ss_dssp CCTHHHHHHHHHHTTHHHHHHSSCSSSSSCCCSTTTHHHHHHHHHHHHHHHHHHHTCCCCSSCSSCSTTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHH
Confidence 357889999999999999999999999999999999999999999999999999999998 7999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHh
Q psy15324 211 FLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNV 251 (363)
Q Consensus 211 ~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~ 251 (363)
+|+..++.+++|++++|++|++++....+++++++++++|.
T Consensus 82 ~l~~~~~~i~~eai~~l~~~~~~~~~~~~l~v~~~s~~v~~ 122 (283)
T 3h90_A 82 FISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTI 122 (283)
T ss_dssp HHHHHHHHHHHHHHHTSSSSCCCCCCCCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999887776667777888877776
No 5
>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A
Probab=98.93 E-value=6.3e-09 Score=81.78 Aligned_cols=70 Identities=21% Similarity=0.282 Sum_probs=58.7
Q ss_pred HhHHHHHHHhhC--CceeEEEEEEEEEEeCCeEEEEEEEEeC---ChhHHHHHHHHHHHHHHh-cCCceEEEEeeecC
Q psy15324 252 VDAIQRRLLENV--DGVLAVHEFHVWQLAGDRIIASAHIRCR---NLSEYMKLAEKVKEFFHN-EGIHSTTIQPEFVE 323 (363)
Q Consensus 252 v~~i~~~~i~~v--~Gv~~v~dlhiw~v~g~~~v~~~Hi~v~---~v~~a~~i~~~I~~~lk~-~~v~~vtI~vEp~~ 323 (363)
+++++ +.++++ |||.++|++|+|.. |+..++++|+.++ ++.+++++.++|++.|++ |++.++|||+||..
T Consensus 12 ~~~I~-~~l~~~~~~gV~~vh~l~~~~~-g~~~~v~~hi~v~~~~~~~~~h~i~~~ie~~l~~~~~~~~vtIh~ep~~ 87 (94)
T 3byp_A 12 VERIR-AFLQERIRGRALEVHDLKTRRA-GPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPGLQATIHVEPEG 87 (94)
T ss_dssp HHHHH-HHHHHHHTTTCSEEEEEEEEEE-TTEEEEEEEEEECTTCBHHHHHHHHHHHHHHHHHHSTTEEEEEEEEECC
T ss_pred HHHHH-HHHHhcCCCCceeeeeEEEEEE-CCcEEEEEEEEECCCCcHHHHHHHHHHHHHHHHHHCCCCEEEEEeCCCC
Confidence 35554 455788 99999999999986 6779999999998 468899999999999975 67779999999943
No 6
>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}
Probab=98.83 E-value=2.2e-08 Score=80.93 Aligned_cols=71 Identities=20% Similarity=0.273 Sum_probs=59.7
Q ss_pred HhHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEEEEEEeC---ChhHHHHHHHHHHHHHHh-cC-CceEEEEeeecCc
Q psy15324 252 VDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCR---NLSEYMKLAEKVKEFFHN-EG-IHSTTIQPEFVEL 324 (363)
Q Consensus 252 v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~Hi~v~---~v~~a~~i~~~I~~~lk~-~~-v~~vtI~vEp~~~ 324 (363)
+++++ +.++++|||.+++++|+|. .|+..++++|+.++ ++.+++++.++|++.|++ ++ +.++|||+||...
T Consensus 12 ~~~I~-~~l~~~~gV~~vh~lr~r~-~G~~~~v~~hI~v~~~~sv~eah~i~~~ie~~L~~~~~~i~~vtIhvEp~~~ 87 (107)
T 2zzt_A 12 YDDIF-AVLERFPNVHNPHRVRIRR-VGTKYFIEMDIEVDGKMSVKDAHELTVKIRKEMLKRRDDIEDVTIHVEPLGN 87 (107)
T ss_dssp HHHHH-HHHTTCSSCEEEEEEEEEC-SCC-CEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEETTC
T ss_pred HHHHH-HHHHcCCCccccEEEEEEE-ECCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEEEecCCC
Confidence 35554 4568999999999999986 67889999999998 568999999999999975 66 8999999999654
No 7
>2lix_A IMKTX104, potassium channel toxins; disulfide bond stabilized structure; NMR {Lychas mucronatus}
Probab=64.24 E-value=1.9 Score=24.49 Aligned_cols=20 Identities=45% Similarity=0.851 Sum_probs=15.8
Q ss_pred CCcccccCCCCCCCCCCCCCCC
Q psy15324 337 SEDCVLDCPKYDTEKPCALSTC 358 (363)
Q Consensus 337 ~~~c~~~~~~~~~~~~~~~~~~ 358 (363)
+|+|++-|- ||-..|....|
T Consensus 5 hedctllcy--dtigtcvdgkc 24 (27)
T 2lix_A 5 HEDCTLLCY--DTIGTCVDGKC 24 (27)
Confidence 568999995 57788888776
No 8
>2b5b_A Defensin; antibiotic; NMR {Caretta caretta}
Probab=56.11 E-value=12 Score=22.52 Aligned_cols=28 Identities=32% Similarity=0.702 Sum_probs=21.3
Q ss_pred CCCcccccCCCCCCC---CCCCCCCCCCCCC
Q psy15324 336 PSEDCVLDCPKYDTE---KPCALSTCCGPSK 363 (363)
Q Consensus 336 ~~~~c~~~~~~~~~~---~~~~~~~~~~~~~ 363 (363)
|...|++.|.|-+.. .+|..--||-|-|
T Consensus 4 cpgrctlkcgkherptlpyncgkyiccvpvk 34 (36)
T 2b5b_A 4 CPGRCTLKCGKHERPTLPYNCGKYICCVPVK 34 (36)
T ss_dssp CSSCSSSSCCSSCCSSCSSSBCCSSCSSSCC
T ss_pred CCcceeEeccCcCCCCcCccCCceEEeEEEe
Confidence 455799999987643 4688888998865
No 9
>4g1u_A Hemin transport system permease protein HMUU; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=43.74 E-value=87 Score=29.76 Aligned_cols=17 Identities=12% Similarity=-0.019 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy15324 99 ALSLLMVMLILRSVWPL 115 (363)
Q Consensus 99 la~l~i~~~i~~~~~~l 115 (363)
+++++++..+..+|..+
T Consensus 83 l~a~lvGaaLavsG~~~ 99 (357)
T 4g1u_A 83 LLAVVVGCALAVSGTIM 99 (357)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55666666666555544
No 10
>3qyh_A CO-type nitrIle hydratase alpha subunit; cobalt, cysteine sulfinic acid, lyase; 2.00A {Pseudomonas putida} PDB: 3qyg_A 3qxe_A 3qz9_A 3qz5_A
Probab=29.52 E-value=19 Score=31.88 Aligned_cols=22 Identities=9% Similarity=0.149 Sum_probs=11.8
Q ss_pred HHHHHHHHHHhcCCc---eEEEEee
Q psy15324 299 LAEKVKEFFHNEGIH---STTIQPE 320 (363)
Q Consensus 299 i~~~I~~~lk~~~v~---~vtI~vE 320 (363)
+..+=+..|++||+. .+.|+|-
T Consensus 154 lVrePR~vL~EfGv~lP~~v~VrV~ 178 (226)
T 3qyh_A 154 MVSDPRGVLAEFGLVIPANKEIRVW 178 (226)
T ss_dssp HTTCHHHHHHHTTCCCCTTSEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 334446677777533 4555543
No 11
>3kog_A Putative pore-forming toxin; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 1.85A {Bacteroides vulgatus atcc 8482}
Probab=26.31 E-value=21 Score=32.05 Aligned_cols=7 Identities=86% Similarity=1.787 Sum_probs=2.0
Q ss_pred CCCCCCC
Q psy15324 48 HGHGHSH 54 (363)
Q Consensus 48 h~h~h~~ 54 (363)
|+|||+|
T Consensus 236 ~~hghgh 242 (256)
T 3kog_A 236 HGHGHGH 242 (256)
T ss_dssp CBTBC--
T ss_pred cccCcCC
Confidence 3344444
No 12
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=23.31 E-value=1.6e+02 Score=22.53 Aligned_cols=52 Identities=8% Similarity=0.126 Sum_probs=32.4
Q ss_pred EEEEEEEEEeC-CeEEEEEEEEeCChhHHHHHHHHHHHHH-Hhc-CCceEEEEeeecC
Q psy15324 269 VHEFHVWQLAG-DRIIASAHIRCRNLSEYMKLAEKVKEFF-HNE-GIHSTTIQPEFVE 323 (363)
Q Consensus 269 v~dlhiw~v~g-~~~v~~~Hi~v~~v~~a~~i~~~I~~~l-k~~-~v~~vtI~vEp~~ 323 (363)
+.++.+ .+ +...+++.+-.+.-.....+.+++++.+ ++. |+..+.|++...+
T Consensus 35 V~~I~v---~~~~~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~~p 89 (108)
T 3lno_A 35 VYDVTA---DENNNAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVWNP 89 (108)
T ss_dssp EEEEEE---CTTCCEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECCSS
T ss_pred ceEEEE---CCCCeEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEecC
Confidence 455555 33 4333333332233334567899999999 665 9999988887654
No 13
>1i25_A Huwentoxin-II, HWTX-II; neurotoxin, insecticidal toxin, disulfide bonds; NMR {Ornithoctonus huwena} SCOP: g.3.6.2
Probab=20.76 E-value=70 Score=19.70 Aligned_cols=22 Identities=32% Similarity=0.913 Sum_probs=15.6
Q ss_pred cccccCCCCCC-CCCCCCCCCCC
Q psy15324 339 DCVLDCPKYDT-EKPCALSTCCG 360 (363)
Q Consensus 339 ~c~~~~~~~~~-~~~~~~~~~~~ 360 (363)
+|...|+-+.. ++||.-..|-|
T Consensus 3 EC~~sCdI~KeG~kpCK~KKC~G 25 (37)
T 1i25_A 3 ECSFSCEIEKEGDKPCKKKKCKG 25 (37)
T ss_dssp BCSSCSSSSBCSSSBCBCCCCCT
T ss_pred eEEEEEEEcccCCCccccccCCC
Confidence 58888875544 48898777754
No 14
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=20.61 E-value=1.1e+02 Score=23.08 Aligned_cols=28 Identities=18% Similarity=0.300 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhc-CCceEEEEeeecC
Q psy15324 296 YMKLAEKVKEFFHNE-GIHSTTIQPEFVE 323 (363)
Q Consensus 296 a~~i~~~I~~~lk~~-~v~~vtI~vEp~~ 323 (363)
...+.+++++.+++. |+..+.|.+...+
T Consensus 57 ~~~l~~~i~~al~~l~gv~~V~V~l~~~p 85 (103)
T 3cq1_A 57 HDSLGEAVRQALSRLPGVEEVEVEVTFEP 85 (103)
T ss_dssp SCHHHHHHHHHHHTSTTCCEEEEEECCSS
T ss_pred HHHHHHHHHHHHHhCCCceeEEEEEecCC
Confidence 466889999999885 9999888876544
Done!