BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15326
(78 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPAD--SAEERAKNIFAKMDENNDGQLT 58
MYD+DGNG I EM +IVQAIY M+ + P D + E+R + IF +MD N DG+L+
Sbjct: 107 MYDLDGNGYISKAEMLEIVQAIYKMVSSV-MKMPEDESTPEKRTEKIFRQMDTNRDGKLS 165
Query: 59 QDEFLKGCLQDEELSKML 76
+EF++G D + ++L
Sbjct: 166 LEEFIRGAKSDPSIVRLL 183
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPA-DSAEERAKNIFAKMDENNDGQLTQ 59
+YD++ +G I+ +EM IV+AIYDM+GA + A D+ + F KMD+N DG +T
Sbjct: 97 LYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTL 156
Query: 60 DEFLKGCLQDEELSKML 76
DEFL+ C +D+ + + L
Sbjct: 157 DEFLESCQEDDNIMRSL 173
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSN-RPADSAEERAKNIFAKMDENNDGQLTQ 59
+YD++ +G I +EM I++AIYDM+G C+ D+ + + F KMD+N DG +T
Sbjct: 146 LYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTI 205
Query: 60 DEFLKGCLQDEELSK 74
DEF++ C +DE + +
Sbjct: 206 DEFIESCQKDENIMR 220
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGA-CSSNRPADSAEERAKNIFAKMDENNDGQLTQ 59
+YD+D NG+I EM +IV AIY M+G+ D+ E+R IF MD+N DGQLT
Sbjct: 107 LYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTL 166
Query: 60 DEFLKGCLQDEELSKMLA 77
+EF +G +D + L+
Sbjct: 167 EEFCEGSKRDPTIVSALS 184
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPAD------SAEERAKNIFAKMDENND 54
+YD D NG ID QE+ IV++IY + ACS A+ + EE IF +DEN D
Sbjct: 103 IYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGD 162
Query: 55 GQLTQDEFLKGCLQDEELSKML 76
GQL+ +EF++G +D+ + KML
Sbjct: 163 GQLSLNEFVEGARRDKWVMKML 184
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPA---DSAEERAKNIFAKMDENNDGQL 57
+YD++ +G I+ +EM IV+AIYDM+G + P D+ + F KMD+N DG +
Sbjct: 97 LYDINKDGYINKEEMMDIVKAIYDMMGKYTY--PVLKEDTPRQHVDVFFQKMDKNKDGIV 154
Query: 58 TQDEFLKGCLQDEELSKML 76
T DEFL+ C +D+ + + L
Sbjct: 155 TLDEFLESCQEDDNIMRSL 173
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPA---DSAEERAKNIFAKMDENNDGQL 57
+YD++ +G I+ +EM IV+AIYDM+G + P D+ + F KMD+N DG +
Sbjct: 133 LYDINKDGYINKEEMMDIVKAIYDMMGKYTY--PVLKEDTPRQHVDVFFQKMDKNKDGIV 190
Query: 58 TQDEFLKGCLQDEELSKML 76
T DEFL+ C +D+ + + L
Sbjct: 191 TLDEFLESCQEDDNIMRSL 209
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPA---DSAEERAKNIFAKMDENNDGQL 57
+YD++ +G I +EM I+++IYDM+G P D+ E + F KMD N DG +
Sbjct: 173 LYDINKDGCITKEEMLAIMKSIYDMMG--RHTYPILREDAPLEHVERFFQKMDRNQDGVV 230
Query: 58 TQDEFLKGCLQDEEL 72
T DEFL+ C +DE +
Sbjct: 231 TIDEFLETCQKDENI 245
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSN-RPADSAEERAKNIFAKMDENNDGQLTQ 59
+YD++ +G I +EM I+++IYDM+G + D+ E + F KMD N DG +T
Sbjct: 17 LYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTI 76
Query: 60 DEFLKGCLQDEEL 72
+EFL+ C +DE +
Sbjct: 77 EEFLEACQKDENI 89
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPA---DSAEERAKNIFAKMDENNDGQL 57
+YD++ +G I+ +EM IV+AIYDM+G + P D+ + F KMD+N DG +
Sbjct: 100 LYDINKDGYINKEEMMDIVKAIYDMMGKYTY--PVLKEDTPRQHVDVFFQKMDKNKDGIV 157
Query: 58 TQDEFLKGCLQDEELSKML 76
T DEFL+ +D+ + + L
Sbjct: 158 TLDEFLESXQEDDNIMRSL 176
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNR-PAD--SAEERAKNIFAKMDENNDGQL 57
+YDVDGNG I E+ +IV AI+ M+ + P D + E+RA+ I+ + +D +L
Sbjct: 107 LYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKL 166
Query: 58 TQDEFLKGCLQDEELSKML 76
T+ EF++G L ++E+ +++
Sbjct: 167 TEKEFIEGTLANKEILRLI 185
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNR-PAD--SAEERAKNIFAKMDENNDGQL 57
+YDVDGNG I E+ +IV AI+ M+ + P D + E+RA+ I+ + +D +L
Sbjct: 107 LYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKL 166
Query: 58 TQDEFLKGCLQDEELSKML 76
T+ EF++G L ++E+ +++
Sbjct: 167 TEKEFIEGTLANKEILRLI 185
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNR-PAD--SAEERAKNIFAKMDENNDGQL 57
+YDVDGNG I E+ +IV AI+ M+ + P D + E+RA+ I+ + +D +L
Sbjct: 107 LYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKL 166
Query: 58 TQDEFLKGCLQDEELSKML 76
T+ EF++G L ++E+ +++
Sbjct: 167 TEKEFIEGTLANKEILRLI 185
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNR-PAD--SAEERAKNIFAKMDENNDGQL 57
+YDVDGNG I E+ +IV AI+ M+ + P D + E+RA+ I+ + +D +L
Sbjct: 107 LYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKL 166
Query: 58 TQDEFLKGCLQDEELSKML 76
T+ EF++G L ++E+ +++
Sbjct: 167 TEKEFIEGTLANKEILRLI 185
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNR-PAD--SAEERAKNIFAKMDENNDGQL 57
+YDVDGNG I E+ +IV AI+ M+ + P D + E+RA+ I+ + +D +L
Sbjct: 107 LYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKL 166
Query: 58 TQDEFLKGCLQDEELSKML 76
T+ EF++G L ++E+ +++
Sbjct: 167 TEKEFIEGTLANKEILRLI 185
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNR-PAD--SAEERAKNIFAKMDENNDGQL 57
+YDVDGNG I E+ +IV AI+ M+ + P D + E+RA+ I+ + +D +L
Sbjct: 108 LYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKL 167
Query: 58 TQDEFLKGCLQDEELSKML 76
T+ EF++G L ++E+ +++
Sbjct: 168 TEKEFIEGTLANKEILRLI 186
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YDVDGNG ID E+ I++AI A + A +AEE +F K+D N DG+L+ +
Sbjct: 96 LYDVDGNGCIDRGELLNIIKAI----RAINRCNEAMTAEEFTNMVFDKIDINGDGELSLE 151
Query: 61 EFLKGCLQDEELSKMLA 77
EF++G +DE L +L
Sbjct: 152 EFMEGVQKDEVLLDILT 168
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLG-ACSSNRPADSAEERAKNIFAKMDENNDGQLTQ 59
+YD+D +G I EM IV AIY M+G ++ E+R IFA MD+N DG+LT
Sbjct: 107 LYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTL 166
Query: 60 DEFLKGCLQDEELSKMLA 77
EF +G D + + L+
Sbjct: 167 QEFQEGSKADPSIVQALS 184
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGA-CSSNRPADSAEERAKNIFAKMDENNDGQLTQ 59
+YD++ +G I EM IV ++Y M+G+ + N + E R K IF MD+N DG +T
Sbjct: 107 LYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITL 166
Query: 60 DEFLKGCLQDEEL 72
DEF +G D +
Sbjct: 167 DEFREGSKVDPSI 179
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D D NG I +E ++ S + EE+ F D N+DG +T D
Sbjct: 71 VFDKDNNGFIHFEEFITVL-----------STTSRGTLEEKLSWAFELYDLNHDGYITFD 119
Query: 61 EFL 63
E L
Sbjct: 120 EML 122
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPAD---SAEERAKNIFAKMDENNDGQL 57
+YDVDGNG I E+ +IV AI+ + D + E+RA+ I+ +N+D +L
Sbjct: 115 LYDVDGNGTISKNEVLEIVXAIFKXITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKL 174
Query: 58 TQDEFLKGCLQDEELSKML 76
T+ EF++G L ++E+ +++
Sbjct: 175 TEKEFIEGTLANKEILRLI 193
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YD DGNG ID E+ + A+ + G + S EE +F K+D NNDG+LT +
Sbjct: 101 LYDADGNGSIDKNELLDMFMAVQALNGQQTL-----SPEEFINLVFHKIDINNDGELTLE 155
Query: 61 EFLKGCLQDEEL 72
EF+ G +D++L
Sbjct: 156 EFINGMAKDQDL 167
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 12/61 (19%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERA--KNIFAKMDENNDGQLTQD 60
D+DGNG ID+ E TK A+ + D ++E+ K ++ MD + DG+LT++
Sbjct: 46 DIDGNGEIDLAEFTKFAAAV----------KEQDLSDEKVGLKILYKLMDADGDGKLTKE 95
Query: 61 E 61
E
Sbjct: 96 E 96
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + +G IDI+E+ +I++A + + EE +++ D+NNDG++ D
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHV-----------TEEDIEDLMKDSDKNNDGRIDFD 152
Query: 61 EFLK 64
EFLK
Sbjct: 153 EFLK 156
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I +E+ +++ MLG + D+ I ++DE+ G + +
Sbjct: 28 MFDADGGGDISTKELGTVMR----MLGQNPTKEELDA-------IIEEVDEDGSGTIDFE 76
Query: 61 EFL 63
EFL
Sbjct: 77 EFL 79
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + +G IDI+E+ +I++A + + EE +++ D+NNDG++ D
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHV-----------TEEDIEDLMKDSDKNNDGRIDFD 152
Query: 61 EFLK 64
EFLK
Sbjct: 153 EFLK 156
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I +E+ +++ MLG + D+ I ++DE+ G + +
Sbjct: 28 MFDADGGGDISTKELGTVMR----MLGQNPTKEELDA-------IIEEVDEDGSGTIDFE 76
Query: 61 EFL 63
EFL
Sbjct: 77 EFL 79
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + +G IDI+E+ +I++A + + EE +++ D+NNDG++ D
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHV-----------TEEDIEDLMKDSDKNNDGRIDFD 152
Query: 61 EFLK 64
EFLK
Sbjct: 153 EFLK 156
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I +E+ +++ MLG + D+ I ++DE+ G + +
Sbjct: 28 MFDADGGGDISTKELGTVMR----MLGQNPTKEELDA-------IIEEVDEDGSGTIDFE 76
Query: 61 EFL 63
EFL
Sbjct: 77 EFL 79
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + +G IDI+E+ +I++A + + EE +++ D+NNDG++ D
Sbjct: 101 IFDKNADGFIDIEELGEILRATGEHV-----------TEEDIEDLMKDSDKNNDGRIDFD 149
Query: 61 EFLK 64
EFLK
Sbjct: 150 EFLK 153
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I +E+ +++ MLG + D+ I ++DE+ G + +
Sbjct: 25 MFDADGGGDISTKELGTVMR----MLGQNPTKEELDA-------IIEEVDEDGSGTIDFE 73
Query: 61 EFL 63
EFL
Sbjct: 74 EFL 76
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + +G IDI+E+ +I++A + + EE +++ D+NNDG++ D
Sbjct: 18 IFDKNADGFIDIEELGEILRATGEHV-----------IEEDIEDLMKDSDKNNDGRIDFD 66
Query: 61 EFLK 64
EFLK
Sbjct: 67 EFLK 70
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + +G IDI+E+ +I++A + + EE +++ D+NNDG++ D
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHV-----------IEEDIEDLMKDSDKNNDGRIDFD 152
Query: 61 EFLK 64
EFLK
Sbjct: 153 EFLK 156
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I +E+ +++ MLG + D+ I ++DE+ G + +
Sbjct: 28 MFDADGGGDISTKELGTVMR----MLGQNPTKEELDA-------IIEEVDEDGSGTIDFE 76
Query: 61 EFL 63
EFL
Sbjct: 77 EFL 79
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D + +G ID++E+ KI ML A D EE K+ D+NNDG++ D
Sbjct: 13 MFDKNADGYIDLEEL-KI------MLQATGETITEDDIEELMKD----GDKNNDGRIDYD 61
Query: 61 EFLK 64
EFL+
Sbjct: 62 EFLE 65
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 32.3 bits (72), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D + +G ID++E+ KI ML A D EE K+ D+NNDG++ D
Sbjct: 103 MFDKNADGYIDLEEL-KI------MLQATGETITEDDIEELMKD----GDKNNDGRIDYD 151
Query: 61 EFLK 64
EFL+
Sbjct: 152 EFLE 155
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D + +G ID++E+ KI ML A D EE K+ D+NNDG++ D
Sbjct: 103 MFDKNADGYIDLEEL-KI------MLQATGETITEDDIEELMKD----GDKNNDGRIDYD 151
Query: 61 EFLK 64
EFL+
Sbjct: 152 EFLE 155
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 32.3 bits (72), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D + +G ID++E+ KI ML A D EE K+ D+NNDG++ D
Sbjct: 15 MFDKNADGYIDLEEL-KI------MLQATGETITEDDIEELMKD----GDKNNDGRIDYD 63
Query: 61 EFLK 64
EFL+
Sbjct: 64 EFLE 67
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 32.3 bits (72), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D + +G ID++E+ KI ML A D EE K+ D+NNDG++ D
Sbjct: 18 MFDKNADGYIDLEEL-KI------MLQATGETITEDDIEELMKD----GDKNNDGRIDYD 66
Query: 61 EFLK 64
EFL+
Sbjct: 67 EFLE 70
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 32.0 bits (71), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 3 DVDGNGVIDIQE-MTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
D DG D +E +I QAI A++R +F K D+N G+L DE
Sbjct: 18 DKDGKKAKDRKEAWERIRQAI--------PREKTAEAKQRRIELFKKFDKNETGKLXYDE 69
Query: 62 FLKGCLQ 68
GCL+
Sbjct: 70 VYSGCLE 76
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 10/60 (16%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D GN ++D +E + V + + GA + A +F ++D+N G +T DEF
Sbjct: 140 DASGNMLVDEEEFKRAVPKL-EAWGAKVEDPAA---------LFKELDKNGTGSVTFDEF 189
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 32.0 bits (71), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D + +G ID++E+ KI ML A D EE K+ D+NNDG++ D
Sbjct: 103 MFDKNADGYIDLEEL-KI------MLQATGETITEDDIEELMKD----GDKNNDGRIDYD 151
Query: 61 EFLK 64
EFL+
Sbjct: 152 EFLE 155
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D DG+G +D E M+ C + EE ++F D+N DG + +E
Sbjct: 65 DEDGSGTVDFDEFLV-------MMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE- 116
Query: 63 LKGCLQ 68
LK LQ
Sbjct: 117 LKIMLQ 122
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D + +G ID++E+ KI ML A D EE K+ D+NNDG++ D
Sbjct: 23 MFDKNADGYIDLEEL-KI------MLQATGETITEDDIEELMKD----GDKNNDGRIDYD 71
Query: 61 EFLK 64
EFL+
Sbjct: 72 EFLE 75
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D + +G ID+ E+ KI ML A D EE K+ D+NNDG++ D
Sbjct: 103 MWDKNADGYIDLDEL-KI------MLQATGETITEDDIEELMKD----GDKNNDGRIDYD 151
Query: 61 EFLK 64
EFL+
Sbjct: 152 EFLE 155
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D + +G ID+ E+ KI ML A D EE K+ D+NNDG++ D
Sbjct: 14 MFDKNADGYIDLDEL-KI------MLQATGETITEDDIEELMKD----GDKNNDGRIDYD 62
Query: 61 EFLK 64
EFL+
Sbjct: 63 EFLE 66
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 13/75 (17%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
YD D +G+ID E+ + A S R +D + + K D GQ+ D+
Sbjct: 80 YDRDNSGMIDKNELKQ----------ALSGYRLSDQFHD---ILIRKFDRQGRGQIAFDD 126
Query: 62 FLKGCLQDEELSKML 76
F++GC+ + L+ +
Sbjct: 127 FIQGCIVLQRLTDIF 141
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D D +G + + E +QA+ D +++A F +D N +GQ+++DEF
Sbjct: 112 DTDKDGYVSLPEFKAFLQAV-----------GPDLTDDKAITCFNTLDFNKNGQISRDEF 160
Query: 63 L 63
L
Sbjct: 161 L 161
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + +G ID +E+ +I +A S D E +++ D+NNDG++ D
Sbjct: 101 IFDRNADGYIDAEELAEIFRA--------SGEHVTD---EEIESLMKDGDKNNDGRIDFD 149
Query: 61 EFLK 64
EFLK
Sbjct: 150 EFLK 153
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I ++E+ +++ MLG + D+ I ++DE+ G + +
Sbjct: 25 MFDADGGGDISVKELGTVMR----MLGQTPTKEELDA-------IIEEVDEDGSGTIDFE 73
Query: 61 EFL 63
EFL
Sbjct: 74 EFL 76
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D D +G + + E +QA+ D +++A F +D N +GQ+++DEF
Sbjct: 112 DTDKDGYVSLPEFKAFLQAV-----------GPDLTDDKAITCFNTLDFNKNGQISRDEF 160
Query: 63 L 63
L
Sbjct: 161 L 161
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + +G ID +E+ +I +A S D E +++ D+NNDG++ D
Sbjct: 101 IFDRNADGYIDAEELAEIFRA--------SGEHVTD---EEIESLMKDGDKNNDGRIDFD 149
Query: 61 EFLK 64
EFLK
Sbjct: 150 EFLK 153
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I ++E+ +++ MLG + D+ I ++DE+ G + +
Sbjct: 25 MFDADGGGDISVKELGTVMR----MLGQTPTKEELDA-------IIEEVDEDGSGTIDFE 73
Query: 61 EFL 63
EFL
Sbjct: 74 EFL 76
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 45 IFAKMDENNDGQLTQDEFLKG 65
IF K+D NNDG L +DE ++G
Sbjct: 336 IFRKLDTNNDGMLDRDELVRG 356
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 15/65 (23%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSA--EERAKNIFAKMDENNDGQLT 58
M+D DG+G I +E+ K+ ADS+ E ++I ++D N DG++
Sbjct: 425 MFDKDGSGKISTKELFKLFSQ-------------ADSSIQMEELESIIEQVDNNKDGEVD 471
Query: 59 QDEFL 63
+EF+
Sbjct: 472 FNEFV 476
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 7 NGVIDIQEMT---KIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEFL 63
N +++I++ K+ QA +G+ +++ D +E IF KMD+N DGQL + E +
Sbjct: 325 NAILNIRQFQGTQKLAQAALLYMGSKLTSQ--DETKELTA-IFHKMDKNGDGQLDRAELI 381
Query: 64 KGCLQDEELSKM 75
+G +EL +M
Sbjct: 382 EGY---KELMRM 390
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 17/70 (24%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D D +G I E+ I +D E K++ +++D+NNDG++ D
Sbjct: 449 MFDSDNSGKISSTELATIFGV-------------SDVDSETWKSVLSEVDKNNDGEVDFD 495
Query: 61 EF----LKGC 66
EF LK C
Sbjct: 496 EFQQMLLKLC 505
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 7 NGVIDIQEMT---KIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEFL 63
N +++I++ K+ QA +G+ +++ D +E IF KMD+N DGQL + E +
Sbjct: 326 NAILNIRQFQGTQKLAQAALLYMGSKLTSQ--DETKELTA-IFHKMDKNGDGQLDRAELI 382
Query: 64 KGCLQDEELSKM 75
+G +EL +M
Sbjct: 383 EGY---KELMRM 391
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 17/70 (24%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D D +G I E+ I +D E K++ +++D+NNDG++ D
Sbjct: 450 MFDSDNSGKISSTELATIFGV-------------SDVDSETWKSVLSEVDKNNDGEVDFD 496
Query: 61 EF----LKGC 66
EF LK C
Sbjct: 497 EFQQMLLKLC 506
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D D +G I I+++ ++ + + + L EE + + A+ D N+D ++ +D
Sbjct: 17 LFDDDNSGTITIKDLRRVAKELGENL-----------TEEELQEMIAEADRNDDNEIDED 65
Query: 61 EFLK 64
EF++
Sbjct: 66 EFIR 69
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 7 NGVIDIQEMT---KIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEFL 63
N +++I++ K+ QA +G+ +++ D +E IF KMD+N DGQL + E +
Sbjct: 302 NAILNIRQFQGTQKLAQAALLYMGSKLTSQ--DETKELTA-IFHKMDKNGDGQLDRAELI 358
Query: 64 KGCLQDEELSKM 75
+G +EL +M
Sbjct: 359 EGY---KELMRM 367
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 17/70 (24%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D D +G I E+ I +D E K++ +++D+NNDG++ D
Sbjct: 426 MFDSDNSGKISSTELATIFGV-------------SDVDSETWKSVLSEVDKNNDGEVDFD 472
Query: 61 EF----LKGC 66
EF LK C
Sbjct: 473 EFQQMLLKLC 482
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 42 AKNIFAKMDENNDGQLTQDEF 62
AK +F K D+N DG+L+ DEF
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEF 23
>pdb|2CCM|A Chain A, X-Ray Structure Of Calexcitin From Loligo Pealeii At
1.8a
pdb|2CCM|B Chain B, X-Ray Structure Of Calexcitin From Loligo Pealeii At
1.8a
Length = 191
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKM----DENNDGQ 56
YD + +GVI+ + ++ I ++ + + + A K I+ + DEN D Q
Sbjct: 21 FYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQ 80
Query: 57 LTQDEFLK 64
+T++E+LK
Sbjct: 81 VTKEEWLK 88
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG+G I ++E+ +++++ P EE +++ +++D + +G + D
Sbjct: 18 LFDKDGDGCITVEELATVIRSL--------DQNP---TEEELQDMISEVDADGNGTIEFD 66
Query: 61 EFL 63
EFL
Sbjct: 67 EFL 69
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG+G I ++E+ +++++ P EE +++ +++D + +G + D
Sbjct: 18 LFDKDGDGCITVEELATVIRSL--------DQNP---TEEELQDMISEVDADGNGTIEFD 66
Query: 61 EFL 63
EFL
Sbjct: 67 EFL 69
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D D +G I I+++ ++ + + + L EE + + A+ D N+D ++ +D
Sbjct: 109 LFDDDNSGTITIKDLRRVAKELGENL-----------TEEELQEMIAEADRNDDNEIDED 157
Query: 61 EFLK 64
EF++
Sbjct: 158 EFIR 161
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG+G ID +E+ ++A+ + +E K + +++D++ G + +
Sbjct: 36 LFDTDGSGTIDAKELKVAMRAL-----------GFEPKKEEIKKMISEIDKDGSGTIDFE 84
Query: 61 EFL 63
EFL
Sbjct: 85 EFL 87
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 14/69 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D + +G ID+ E+ KI ML A D EE K+ D+NNDG++ D
Sbjct: 103 MFDKNADGYIDLDEL-KI------MLQATGETITEDDIEELMKD----GDKNNDGRIDYD 151
Query: 61 ---EFLKGC 66
EF+KG
Sbjct: 152 EWLEFMKGV 160
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 14/69 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D + +G ID+ E+ KI ML A D EE K+ D+NNDG++ D
Sbjct: 103 MFDKNADGYIDLDEL-KI------MLQATGETITEDDIEELMKD----GDKNNDGRIDYD 151
Query: 61 ---EFLKGC 66
EF+KG
Sbjct: 152 EXLEFMKGV 160
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 33 RPADSAEERAKNIFAKMDENNDGQLTQDEFLKGCL 67
RPAD A+ +F ++D + DG +T EF +G L
Sbjct: 59 RPAD-----AEAVFQRLDADRDGAITFQEFARGFL 88
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 41 RAKNIFAKMDENNDGQLTQDEFLKGCLQ 68
R +++FA D N G+L ++EF C +
Sbjct: 28 RLRSVFAACDANRSGRLEREEFRALCTE 55
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG+G I ++E+ +++++ + EE +++ +++D + +G + D
Sbjct: 18 LFDKDGDGCITVEELATVIRSL-----------DQNPTEEELQDMISEVDADGNGTIEFD 66
Query: 61 EFL 63
EFL
Sbjct: 67 EFL 69
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 16/80 (20%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D DGNG I+ E L + AEE K F D++ +G ++ E
Sbjct: 56 DADGNGTIEFDE----------FLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASEL 105
Query: 63 ------LKGCLQDEELSKML 76
L L DEE+ +M+
Sbjct: 106 RHVMINLGEKLTDEEVEQMI 125
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M D + +G ID+ E+ KI ML A D EE K+ D+NNDG++ D
Sbjct: 103 MXDKNADGYIDLDEL-KI------MLQATGETITEDDIEELMKD----GDKNNDGRIDYD 151
Query: 61 EFLK 64
EFL+
Sbjct: 152 EFLE 155
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 28.9 bits (63), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query: 17 KIVQAIYDMLGACSSNRPADSAEERAK--NIFAKMDENNDGQLTQDEFLKG 65
K+ QA +G+ + EER + +IF K+D+N DGQL + E ++G
Sbjct: 335 KLAQAAILFIGS-----KLTTLEERKELTDIFKKLDKNGDGQLDKKELIEG 380
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 28.9 bits (63), Expect = 0.67, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 13/67 (19%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+D D +G I E+ I +D E K++ +++D+NNDG++ DE
Sbjct: 427 FDSDNSGKISSTELATIFGV-------------SDVDSETWKSVLSEVDKNNDGEVDFDE 473
Query: 62 FLKGCLQ 68
F + L+
Sbjct: 474 FQQXLLK 480
Score = 26.6 bits (57), Expect = 3.8, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 45 IFAKMDENNDGQLTQDEFLKG 65
IF K D+N DGQL + E ++G
Sbjct: 340 IFHKXDKNGDGQLDRAELIEG 360
>pdb|1SNL|A Chain A, Nmr Solution Structure Of The Calcium-Binding Domain Of
Nucleobindin (Calnuc)
Length = 103
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 1 MYDVDGNGVIDIQEM----TKIVQAIYDMLGACSSNRPADSAEERAK-NIFAKMDENNDG 55
++D++ +GV+D QE+ TK ++ +YD R + R + ++ +D N D
Sbjct: 28 LHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDR 87
Query: 56 QLTQDEFLKGCLQDE 70
+T +EFL + E
Sbjct: 88 LVTLEEFLASTQRKE 102
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand
Calcium- Binding Protein
Length = 176
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 14/72 (19%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAE-ERAKNIFAKMDE--------N 52
+D DGNG ++ + K Q I + G + A +AE + KN F + +
Sbjct: 16 WDFDGNGALERADFEKEAQHIAEAFG-----KDAGAAEVQTLKNAFGGLFDYLAKEAGVG 70
Query: 53 NDGQLTQDEFLK 64
+DG LT+++F++
Sbjct: 71 SDGSLTEEQFIR 82
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
YD D +G+ID E+ + + G S++ D + K D GQ+ D+
Sbjct: 101 YDRDNSGMIDKNELKQALSG----FGYRLSDQFHDI-------LIRKFDRQGRGQIAFDD 149
Query: 62 FLKGCLQDEELSKML 76
F++GC+ + L+ +
Sbjct: 150 FIQGCIVLQRLTDIF 164
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
YD D +G+ID E+ + + G S++ D + K D GQ+ D+
Sbjct: 102 YDRDNSGMIDKNELKQALSG----FGYRLSDQFHDI-------LIRKFDRQGRGQIAFDD 150
Query: 62 FLKGCLQDEELSKML 76
F++GC+ + L+ +
Sbjct: 151 FIQGCIVLQRLTDIF 165
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
YD D +G+ID E+ + + G S++ D + K D GQ+ D+
Sbjct: 83 YDRDNSGMIDKNELKQALSG----FGYRLSDQFHDI-------LIRKFDRQGRGQIAFDD 131
Query: 62 FLKGCLQDEELSKML 76
F++GC+ + L+ +
Sbjct: 132 FIQGCIVLQRLTDIF 146
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
YD D +G+ID E+ + + G S++ D + K D GQ+ D+
Sbjct: 79 YDRDNSGMIDKNELKQALSG----FGYRLSDQFHDI-------LIRKFDRQGRGQIAFDD 127
Query: 62 FLKGCLQDEELSKML 76
F++GC+ + L+ +
Sbjct: 128 FIQGCIVLQRLTDIF 142
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
YD D +G+ID E+ + + G S++ D + K D GQ+ D+
Sbjct: 80 YDRDNSGMIDKNELKQALSG----FGYRLSDQFHDI-------LIRKFDRQGRGQIAFDD 128
Query: 62 FLKGCLQDEELSKML 76
F++GC+ + L+ +
Sbjct: 129 FIQGCIVLQRLTDIF 143
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 28.5 bits (62), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
YD D +G+ID E+ QA+ + + R +D + + K D GQ+ D+
Sbjct: 83 YDRDNSGMIDKNELK---QAL-----SGAGYRLSDQFHD---ILIRKFDRQGRGQIAFDD 131
Query: 62 FLKGCLQDEELSKML 76
F++GC+ + L+ +
Sbjct: 132 FIQGCIVLQRLTDIF 146
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKM---DENNDGQL 57
M+D DGN ++D E++ + ++ G S P S +E I + D+NNDG +
Sbjct: 76 MHDYDGNNLLDGLELSTAITHVHKEEG--SEQAPLMSEDELINIIDGVLRDDDKNNDGYI 133
Query: 58 TQDEFLKGC 66
EF K
Sbjct: 134 DYAEFAKSL 142
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKM---DENNDGQL 57
M+D DGN ++D E++ + ++ G S P S +E I + D+NNDG +
Sbjct: 26 MHDYDGNNLLDGLELSTAITHVHKEEG--SEQAPLMSEDELINIIDGVLRDDDKNNDGYI 83
Query: 58 TQDEFLKGC 66
EF K
Sbjct: 84 DYAEFAKSL 92
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKM---DENNDGQL 57
M+D DGN ++D E++ + ++ G S P S +E I + D+NNDG +
Sbjct: 57 MHDYDGNNLLDGLELSTAITHVHKEEG--SEQAPLMSEDELINIIDGVLRDDDKNNDGYI 114
Query: 58 TQDEFLKGC 66
EF K
Sbjct: 115 DYAEFAKSL 123
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG+G ID +E+ ++A+ + +E K + +++D++ G + +
Sbjct: 38 LFDTDGSGTIDAKELKVAMRAL-----------GFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 61 EFL 63
EFL
Sbjct: 87 EFL 89
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+D +G+G I + E+T ++ LG+ S+ + + + A++D + DG + +E
Sbjct: 12 FDTNGDGKISLSELTDALRT----LGSTSA--------DEVQRMMAEIDTDGDGFIDFNE 59
Query: 62 FLKGCLQDEELSKMLA 77
F+ C + L K +A
Sbjct: 60 FISFCNANPGLMKDVA 75
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 14/66 (21%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERA-KNIFAKMDENNDGQLTQD 60
+D +G+G +D++E + ++ P A E FAK+D + DG +T D
Sbjct: 82 WDRNGSGTLDLEEFLRALRP------------PMSQAREAVIAAAFAKLDRSGDGVVTVD 129
Query: 61 EFLKGC 66
+ L+G
Sbjct: 130 D-LRGV 134
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+D +G+G I + E+T ++ LG+ S+ + + + A++D + DG + +E
Sbjct: 11 FDTNGDGKISLSELTDALRT----LGSTSA--------DEVQRMMAEIDTDGDGFIDFNE 58
Query: 62 FLKGCLQDEELSKMLA 77
F+ C + L K +A
Sbjct: 59 FISFCNANPGLMKDVA 74
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG+G ID +E+ ++A+ + +E K + A +D++ G + +
Sbjct: 16 LFDTDGSGTIDAKELKVAMRAL-----------GFEPKKEEIKKMIADIDKDGSGTIDFE 64
Query: 61 EFLK 64
EFL+
Sbjct: 65 EFLQ 68
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG G ID++E+ ++A LG + +E K + +++D+ G++
Sbjct: 39 LFDADGTGTIDVKELKVAMRA----LG-------FEPKKEEIKKMISEIDKEGTGKMNFG 87
Query: 61 EFL 63
+FL
Sbjct: 88 DFL 90
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I +E+ +++ MLG + D+ I ++DE+ G + +
Sbjct: 28 MFDADGGGDISTKELGTVMR----MLGQNPTKEELDA-------IIEEVDEDGSGTIDFE 76
Query: 61 EFL 63
EFL
Sbjct: 77 EFL 79
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I +E+ +++ MLG + D+ I ++DE+ G + +
Sbjct: 17 MFDADGGGDISTKELGTVMR----MLGQNPTKEELDA-------IIEEVDEDGSGTIDFE 65
Query: 61 EFL 63
EFL
Sbjct: 66 EFL 68
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D+DGNG I ++E+ +I G P ++ ++ ++D N DG++
Sbjct: 137 FFDIDGNGKISVEELKRI-------FGRDDIENPL--IDKAIDSLLQEVDLNGDGEIDFH 187
Query: 61 EFL 63
EF+
Sbjct: 188 EFM 190
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 26.6 bits (57), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D +G+G + E+ + + D A S D +E + + D+N+DG+++++EF
Sbjct: 17 DANGDGYVTALELQTFMVTL-DAYKALSK----DKVKEASAKLIKMADKNSDGKISKEEF 71
Query: 63 L 63
L
Sbjct: 72 L 72
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 12/65 (18%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEE---RAKNIFAKMDENNDGQL 57
++DVD +G I E+ I+ + N+ + + R K + +D+NNDG++
Sbjct: 130 VFDVDNDGEITTAELAHIL---------YNGNKKGNITQRDVNRVKRMIRDVDKNNDGKI 180
Query: 58 TQDEF 62
EF
Sbjct: 181 DFHEF 185
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 38 AEERAKNIFAKMDENNDGQLTQDEFLK 64
EE +++ D+NNDG++ DEFLK
Sbjct: 3 TEEDIEDLMKDSDKNNDGRIDFDEFLK 29
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D D +G I+ +E+ +++ G + R + E +A + A D ++DG++ D
Sbjct: 49 ILDKDQSGFIEEEELKGVLK------GFSAHGRDLNDTETKA--LLAAGDSDHDGKIGAD 100
Query: 61 EFLKGCLQ 68
EF K Q
Sbjct: 101 EFAKMVAQ 108
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YD+ G I+ +E+ ++V A +L D E F + D NDG++ D
Sbjct: 119 LYDLRQTGFIEREELKEMVVA---LLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDID 175
Query: 61 EF 62
E+
Sbjct: 176 EW 177
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YD+ G I+ +E+ ++V A +L D E F + D NDG++ D
Sbjct: 119 LYDLRQTGFIEREELKEMVVA---LLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDID 175
Query: 61 EF 62
E+
Sbjct: 176 EW 177
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 45 IFAKMDENNDGQLTQDEFLKG 65
IF ++D N DGQL + E ++G
Sbjct: 319 IFRQLDNNGDGQLDRKELIEG 339
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D +G+G +D +E+ + + + G S+ + E +I +D + +G + EF
Sbjct: 324 DNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEF 383
Query: 63 LKGCL 67
+ C+
Sbjct: 384 VTVCM 388
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 15/64 (23%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERA-KNIFAKMDENNDGQLTQD 60
+D DGNG I + E+ + D E + K + + +D NNDG + +
Sbjct: 152 FDQDGNGKISVDELASVF--------------GLDHLESKTWKEMISGIDSNNDGDVDFE 197
Query: 61 EFLK 64
EF K
Sbjct: 198 EFCK 201
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 11/67 (16%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG+G I + E + G S P+D E A+ F D +N G+L D
Sbjct: 124 IFDKDGSGSISLDE--------WKTYGGISGICPSD---EDAEKTFKHCDLDNSGKLDVD 172
Query: 61 EFLKGCL 67
E + L
Sbjct: 173 EMTRQHL 179
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 15/64 (23%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERA-KNIFAKMDENNDGQLTQD 60
+D DGNG I + E+ + D E + K + + +D NNDG + +
Sbjct: 435 FDQDGNGKISVDELASVF--------------GLDHLESKTWKEMISGIDSNNDGDVDFE 480
Query: 61 EFLK 64
EF K
Sbjct: 481 EFCK 484
Score = 25.4 bits (54), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 11/60 (18%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D D NG ID E + + +R + ++++ ++ F K D++ +G+++ DE
Sbjct: 400 DFDRNGYIDYSEFVTV-----------AMDRKSLLSKDKLESAFQKFDQDGNGKISVDEL 448
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 44 NIFAKMDENNDGQLTQDEFLKG 65
+IF +D+N DGQL + E + G
Sbjct: 350 DIFRHIDKNGDGQLDRQELIDG 371
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DGNG + E+ ++ + + L ++E + D + DGQ+ +
Sbjct: 91 VFDKDGNGFVSAAELRHVMTRLGEKL-----------SDEEVDEMIRAADTDGDGQVNYE 139
Query: 61 EFLK 64
EF++
Sbjct: 140 EFVR 143
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium
Bound Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERA--KNIFAKMDENNDGQLTQD 60
D DGNG ID E K +I + D ++++ K ++ MD + DG+LT++
Sbjct: 46 DADGNGEIDQNEFAKFYGSI----------QGQDLSDDKIGLKVLYKLMDVDGDGKLTKE 95
Query: 61 E 61
E
Sbjct: 96 E 96
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERA--KNIFAKMDENNDGQLTQD 60
D DGNG ID E K +I + D ++++ K ++ MD + DG+LT++
Sbjct: 46 DADGNGEIDQNEFAKFYGSI----------QGQDLSDDKIGLKVLYKLMDVDGDGKLTKE 95
Query: 61 E 61
E
Sbjct: 96 E 96
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I +E+ +++ MLG + D+ I ++DE+ G + +
Sbjct: 28 MFDADGGGDISTKELGTVMR----MLGQNPTKCELDA-------IICEVDEDGSGTIDFE 76
Query: 61 EFL 63
EFL
Sbjct: 77 EFL 79
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAI 22
++D DG G ID++E+ +A+
Sbjct: 39 LFDADGTGTIDVKELKVAXRAL 60
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 25.4 bits (54), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DGNG I QE+ +++ LG + E + I ++D + DGQ+ +
Sbjct: 44 VFDRDGNGFISKQELGTAMRS----LGYMPN-------EVELEVIIQRLDMDGDGQVDFE 92
Query: 61 EFL 63
EF+
Sbjct: 93 EFV 95
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 25.4 bits (54), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG G ID++E+ ++A+ + +E K + +++D+ G++
Sbjct: 14 LFDADGTGTIDVKELKVAMRAL-----------GFEPKKEEIKKMISEIDKEGTGKMNFG 62
Query: 61 EFL 63
+FL
Sbjct: 63 DFL 65
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 45 IFAKMDENNDGQLTQDEFLKG 65
IF ++D N DGQL + E ++G
Sbjct: 45 IFRQLDNNGDGQLDRKELIEG 65
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 29 CSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF---LK--GCLQDEELSKMLA 77
+ + P D A+ + IF + D N DG+++ E LK G + +E+ +M+A
Sbjct: 2 AAEDTPQDIADR--ERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMA 53
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 16/80 (20%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D DGNG ID E ++ + DS EE+ K F D++ +G ++ E
Sbjct: 56 DADGNGTIDFPEFLNLM---------ARKMKDTDS-EEKLKEAFRVFDKDGNGFISAAEL 105
Query: 63 ------LKGCLQDEELSKML 76
L L DEE+ +M+
Sbjct: 106 RHVMTNLGEKLTDEEVDEMI 125
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.131 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,167,228
Number of Sequences: 62578
Number of extensions: 70121
Number of successful extensions: 643
Number of sequences better than 100.0: 178
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 108
Number of HSP's that attempted gapping in prelim test: 347
Number of HSP's gapped (non-prelim): 383
length of query: 78
length of database: 14,973,337
effective HSP length: 47
effective length of query: 31
effective length of database: 12,032,171
effective search space: 372997301
effective search space used: 372997301
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 45 (21.9 bits)