RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15326
(78 letters)
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 77.2 bits (190), Expect = 9e-20
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADS-AEERAKNIFAKMDENNDGQLTQ 59
+YD+D NG+I EM +IV AIY M+G+ + E+R IF MD+N DGQLT
Sbjct: 107 LYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTL 166
Query: 60 DEFLKGCLQDEELSKML 76
+EF +G +D + L
Sbjct: 167 EEFCEGSKRDPTIVSAL 183
Score = 27.1 bits (60), Expect = 0.51
Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 10/64 (15%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+ +G ++ E KI + + A+ +F D + +G + E
Sbjct: 35 FKDCPSGHLNKSEFQKIYKQFFPFG----------DPSAFAEYVFNVFDADKNGYIDFKE 84
Query: 62 FLKG 65
F+
Sbjct: 85 FICA 88
Score = 25.9 bits (57), Expect = 1.2
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 11/62 (17%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D D NG ID + + A+ ++ F D +N+G ++ DE
Sbjct: 73 DADKNGYID---FKEFICALSVTSRG--------ELNDKLIWAFQLYDLDNNGLISYDEM 121
Query: 63 LK 64
L+
Sbjct: 122 LR 123
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 77.6 bits (191), Expect = 1e-19
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSS-NRPADSAEERAKNIFAKMDENNDGQLTQ 59
+YD++ +G I +EM I++AIYDM+G C+ D+ + + F KMD+N DG +T
Sbjct: 146 LYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTI 205
Query: 60 DEFLKGCLQDEELSKML 76
DEF++ C +DE + + +
Sbjct: 206 DEFIESCQKDENIMRSM 222
Score = 29.9 bits (67), Expect = 0.054
Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 10/61 (16%)
Query: 5 DGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEFLK 64
+GV++ + +I + + A +F D +++G ++ ++F+K
Sbjct: 77 CPSGVVNEETFKEIYSQFFPQG----------DSTTYAHFLFNAFDTDHNGAVSFEDFIK 126
Query: 65 G 65
G
Sbjct: 127 G 127
Score = 27.9 bits (62), Expect = 0.25
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D D NG + ++ + S + +E+ F D N DG +T++
Sbjct: 110 AFDTDHNGAVSFEDF----------IKGLSILLRG-TVQEKLNWAFNLYDINKDGYITKE 158
Query: 61 EFLK 64
E L
Sbjct: 159 EMLD 162
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 76.4 bits (188), Expect = 2e-19
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPAD------SAEERAKNIFAKMDENND 54
+YD D NG ID QE+ IV++IY + ACS A+ + EE IF +DEN D
Sbjct: 103 IYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGD 162
Query: 55 GQLTQDEFLKGCLQDEELSKML 76
GQL+ +EF++G +D+ + KML
Sbjct: 163 GQLSLNEFVEGARRDKWVMKML 184
Score = 29.0 bits (65), Expect = 0.11
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D +G+ ID E V A+ +L + E + K F D++ +G + + E
Sbjct: 69 DTNGDNTIDFLEY---VAALNLVLRG--------TLEHKLKWTFKIYDKDRNGCIDRQEL 117
Query: 63 LKGC 66
L
Sbjct: 118 LDIV 121
Score = 28.6 bits (64), Expect = 0.14
Identities = 8/63 (12%), Positives = 21/63 (33%), Gaps = 11/63 (17%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
+ +G + + E + + + A + + +F D N D + E+
Sbjct: 33 EECPSGTLFMHEFKRFFKVP-----------DNEEATQYVEAMFRAFDTNGDNTIDFLEY 81
Query: 63 LKG 65
+
Sbjct: 82 VAA 84
Score = 23.6 bits (51), Expect = 7.6
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 49 MDENNDGQLTQDEFLKG 65
++E G L EF +
Sbjct: 32 LEECPSGTLFMHEFKRF 48
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase
activator; 3.00A {Homo sapiens}
Length = 211
Score = 76.4 bits (188), Expect = 3e-19
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YD DGNG ID E+ + A+ + G + S EE +F K+D NNDG+LT +
Sbjct: 101 LYDADGNGSIDKNELLDMFMAVQALNG-----QQTLSPEEFINLVFHKIDINNDGELTLE 155
Query: 61 EFLKGCLQDEELSKMLAP 78
EF+ G +D++L +++
Sbjct: 156 EFINGMAKDQDLLEIVYK 173
Score = 30.9 bits (70), Expect = 0.022
Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 10/63 (15%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
+G+ + E + + + G A + ++ D N DG + EF
Sbjct: 30 MEYPSGLQTLHEF----KTLLGLQG------LNQKANKHIDQVYNTFDTNKDGFVDFLEF 79
Query: 63 LKG 65
+
Sbjct: 80 IAA 82
Score = 28.2 bits (63), Expect = 0.21
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 11/62 (17%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D + +G +D E + A+ ++ E++ K F D + +G + ++E
Sbjct: 67 DTNKDGFVDFLE---FIAAVNLIMQE--------KMEQKLKWYFKLYDADGNGSIDKNEL 115
Query: 63 LK 64
L
Sbjct: 116 LD 117
Score = 23.6 bits (51), Expect = 8.9
Identities = 6/17 (35%), Positives = 6/17 (35%)
Query: 49 MDENNDGQLTQDEFLKG 65
M E G T EF
Sbjct: 29 MMEYPSGLQTLHEFKTL 45
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 75.6 bits (186), Expect = 3e-19
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPAD-SAEERAKNIFAKMDENNDGQLTQ 59
+YD+D +G I EM IV AIY M+G + + E+R IFA MD+N DG+LT
Sbjct: 107 LYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTL 166
Query: 60 DEFLKGCLQDEELSKML 76
EF +G D + + L
Sbjct: 167 QEFQEGSKADPSIVQAL 183
Score = 29.4 bits (66), Expect = 0.070
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 10/65 (15%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+G +D KI + + P + A +F DEN DG++ E
Sbjct: 35 IKDCPSGQLDAAGFQKIYKQFF----------PFGDPTKFATFVFNVFDENKDGRIEFSE 84
Query: 62 FLKGC 66
F++
Sbjct: 85 FIQAL 89
Score = 27.1 bits (60), Expect = 0.51
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + +G I+ E + A S + +E+ + F D +NDG +T++
Sbjct: 71 VFDENKDGRIEFSEF----------IQALSVTSRG-TLDEKLRWAFKLYDLDNDGYITRN 119
Query: 61 EFLK 64
E L
Sbjct: 120 EMLD 123
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 76.2 bits (187), Expect = 4e-19
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADS-AEERAKNIFAKMDENNDGQLTQ 59
+YD++ +G I+ +EM IV+AIYDM+G + + + F KMD+N DG +T
Sbjct: 133 LYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTL 192
Query: 60 DEFLKGCLQDEELSKML 76
DEFL+ C +D+ + + L
Sbjct: 193 DEFLESCQEDDNIMRSL 209
Score = 29.2 bits (65), Expect = 0.089
Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D G + ++ + A S + E+ + F D N DG + ++
Sbjct: 97 AFDTTQTGSVKFEDF----------VTALSILLRG-TVHEKLRWTFNLYDINKDGYINKE 145
Query: 61 EFLK 64
E +
Sbjct: 146 EMMD 149
Score = 25.7 bits (56), Expect = 1.8
Identities = 9/64 (14%), Positives = 21/64 (32%), Gaps = 10/64 (15%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+ +GV++ + +I + A A +F D G + ++
Sbjct: 61 KNECPSGVVNEETFKQIYAQFFPHG----------DASTYAHYLFNAFDTTQTGSVKFED 110
Query: 62 FLKG 65
F+
Sbjct: 111 FVTA 114
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand,
transport protein; 2.00A {Rattus norvegicus} SCOP:
a.39.1.5 PDB: 2nz0_A 2i2r_E
Length = 183
Score = 75.2 bits (185), Expect = 5e-19
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNR-PADSAEERAKNIFAKMDENNDGQLTQ 59
+YD++ +G I+ +EM IV+AIYDM+G + D+ + F KMD+N DG +T
Sbjct: 100 LYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTL 159
Query: 60 DEFLKGCLQDEELSKML 76
DEFL+ +D+ + + L
Sbjct: 160 DEFLESXQEDDNIMRSL 176
Score = 28.6 bits (64), Expect = 0.12
Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D G + ++ + A S + E+ + F D N DG + ++
Sbjct: 64 AFDTTQTGSVKFEDF----------VTALSILLRG-TVHEKLRWTFNLYDINKDGYINKE 112
Query: 61 EFLK 64
E +
Sbjct: 113 EMMD 116
Score = 27.5 bits (61), Expect = 0.34
Identities = 9/64 (14%), Positives = 21/64 (32%), Gaps = 10/64 (15%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+ +GV++ + +I + A A +F D G + ++
Sbjct: 28 KNEXPSGVVNEETFKQIYAQFFPHG----------DASTYAHYLFNAFDTTQTGSVKFED 77
Query: 62 FLKG 65
F+
Sbjct: 78 FVTA 81
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 74.9 bits (184), Expect = 7e-19
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADS-AEERAKNIFAKMDENNDGQLTQ 59
+YD++ +G I EM IV ++Y M+G+ + ++ E R K IF MD+N DG +T
Sbjct: 107 LYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITL 166
Query: 60 DEFLKGCLQDEELSKML 76
DEF +G D + L
Sbjct: 167 DEFREGSKVDPSIIGAL 183
Score = 24.0 bits (52), Expect = 6.4
Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 10/65 (15%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+G + ++ KI + + S E+ A ++F D++N+G + +E
Sbjct: 35 LRDCPSGQLAREDFVKIYKQFFPFG----------SPEDFANHLFTVFDKDNNGFIHFEE 84
Query: 62 FLKGC 66
F+
Sbjct: 85 FITVL 89
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 75.5 bits (185), Expect = 1e-18
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADS-AEERAKNIFAKMDENNDGQLTQ 59
+YD++ +G I +EM I+++IYDM+G + + E + F KMD N DG +T
Sbjct: 173 LYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTI 232
Query: 60 DEFLKGCLQDEELSKML 76
DEFL+ C +DE + +
Sbjct: 233 DEFLETCQKDENIMNSM 249
Score = 28.1 bits (62), Expect = 0.20
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 11/62 (17%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D DGNG I ++ L + E+ K F D N DG +T++E
Sbjct: 139 DADGNGAIHFEDFV-------VGLSILLRG----TVHEKLKWAFNLYDINKDGCITKEEM 187
Query: 63 LK 64
L
Sbjct: 188 LA 189
Score = 26.9 bits (59), Expect = 0.55
Identities = 10/64 (15%), Positives = 21/64 (32%), Gaps = 10/64 (15%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+ G++D I + A A +F D + +G + ++
Sbjct: 101 KNECPTGLVDEDTFKLIYSQFFPQG----------DATTYAHFLFNAFDADGNGAIHFED 150
Query: 62 FLKG 65
F+ G
Sbjct: 151 FVVG 154
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal
specific guanylate cyclase activator; 2.40A {Bos taurus}
SCOP: a.39.1.5
Length = 193
Score = 73.7 bits (181), Expect = 2e-18
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPAD-SAEERAKNIFAKMDENNDGQLTQ 59
MYD+DGNG I EM +IVQAIY M+ + + + E+R + IF +MD N DG+L+
Sbjct: 107 MYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSL 166
Query: 60 DEFLKGCLQDEELSKML 76
+EF++G D + ++L
Sbjct: 167 EEFIRGAKSDPSIVRLL 183
Score = 28.3 bits (63), Expect = 0.16
Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 10/64 (15%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+G + ++E KI + A + A+++F D N DG + E
Sbjct: 35 LRDCPSGHLSMEEFKKIYGNFFPYG----------DASKFAEHVFRTFDANGDGTIDFRE 84
Query: 62 FLKG 65
F+
Sbjct: 85 FIIA 88
Score = 27.5 bits (61), Expect = 0.40
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D +G+G ID +E + A+ S E++ K F+ D + +G +++
Sbjct: 71 TFDANGDGTIDFREF---IIAL--------SVTSRGKLEQKLKWAFSMYDLDGNGYISKA 119
Query: 61 EFLK 64
E L+
Sbjct: 120 EMLE 123
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 73.5 bits (180), Expect = 3e-18
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPAD---SAEERAKNIFAKMDENNDGQL 57
+YDVDGNG I E+ +IV AI+ M+ D + E+RA+ I+ +N+D +L
Sbjct: 115 LYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKL 174
Query: 58 TQDEFLKGCLQDEELSKML 76
T+ EF++G L ++E+ +++
Sbjct: 175 TEKEFIEGTLANKEILRLI 193
Score = 26.9 bits (59), Expect = 0.66
Identities = 10/64 (15%), Positives = 27/64 (42%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D + +G +D +E + A ++ + F+ D + +G ++++
Sbjct: 79 SFDSNLDGTLDFKEYVIAL-----------HMTTAGKTNQKLEWAFSLYDVDGNGTISKN 127
Query: 61 EFLK 64
E L+
Sbjct: 128 EVLE 131
Score = 25.7 bits (56), Expect = 1.8
Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 10/63 (15%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
G I Q+ I + + A+++F D N DG L E+
Sbjct: 44 KDCPTGRITQQQFQSIYAKFFPDT----------DPKAYAQHVFRSFDSNLDGTLDFKEY 93
Query: 63 LKG 65
+
Sbjct: 94 VIA 96
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 72.5 bits (178), Expect = 7e-18
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YD+ G I+ +E+ ++V A+ S D E F + D NDG++ D
Sbjct: 119 LYDLRQTGFIEREELKEMVVALLHESELVLSE---DMIEVMVDKAFVQADRKNDGKIDID 175
Query: 61 EFLKGCLQDEELSKML 76
E+ + L K +
Sbjct: 176 EWKDFVSLNPSLIKNM 191
Score = 30.9 bits (70), Expect = 0.021
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 10/62 (16%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
DV NGVI+ E + + P+ E+ K F D G + ++E
Sbjct: 84 DVKRNGVIEFGEF----------VRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREEL 133
Query: 63 LK 64
+
Sbjct: 134 KE 135
Score = 26.7 bits (59), Expect = 0.67
Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 12/63 (19%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
+ +G+I +E + R + A IF D +G + EF
Sbjct: 49 SIIDDGLIHKEEFQLALF------------RNRNRRNLFADRIFDVFDVKRNGVIEFGEF 96
Query: 63 LKG 65
++
Sbjct: 97 VRS 99
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 72.9 bits (179), Expect = 9e-18
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YD+ G I+ QE+ ++V A G + E+ F + D +DG++ ++
Sbjct: 130 LYDLKQQGFIERQEVKQMVVATLAESGMNLKD---TVIEDIIDKTFEEADTKHDGKIDKE 186
Query: 61 EFLKGCLQDEELSKML 76
E+ L+ L K +
Sbjct: 187 EWRSLVLRHPSLLKNM 202
Score = 28.2 bits (63), Expect = 0.16
Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 10/63 (15%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+D NG++ +E A S P +++ F D G + + E
Sbjct: 94 FDTKHNGILGFEEF----------ARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQE 143
Query: 62 FLK 64
+
Sbjct: 144 VKQ 146
Score = 24.8 bits (54), Expect = 3.5
Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 12/63 (19%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
V +G+I+ +E + + A +F D ++G L +EF
Sbjct: 60 AVIDDGLINKEEFQLALF------------KTNKKESLFADRVFDLFDTKHNGILGFEEF 107
Query: 63 LKG 65
+
Sbjct: 108 ARA 110
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 72.1 bits (177), Expect = 1e-17
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YDVDGNG ID E+ I++AI + + A +AEE +F K+D N DG+L+ +
Sbjct: 96 LYDVDGNGCIDRGELLNIIKAIRAI----NRCNEAMTAEEFTNMVFDKIDINGDGELSLE 151
Query: 61 EFLKGCLQDEELSKML 76
EF++G +DE L +L
Sbjct: 152 EFMEGVQKDEVLLDIL 167
Score = 30.5 bits (69), Expect = 0.029
Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 10/63 (15%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
+G + + E + + SA + + +F D N DG + E+
Sbjct: 25 TECPSGQLTLYEFKQFFGLKN----------LSPSANKYVEQMFETFDFNKDGYIDFMEY 74
Query: 63 LKG 65
+
Sbjct: 75 VAA 77
Score = 29.0 bits (65), Expect = 0.11
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 11/62 (17%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D + +G ID E V A+ S +++ + F D + +G + + E
Sbjct: 62 DFNKDGYIDFMEY---VAAL--------SLVLKGKVDQKLRWYFKLYDVDGNGCIDRGEL 110
Query: 63 LK 64
L
Sbjct: 111 LN 112
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 67.9 bits (166), Expect = 3e-16
Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D D +G ++ ++++++V + + A ++ NI + D + DG +
Sbjct: 106 IFDFDDDGTLNREDLSRLVNCLTGEGE--DTRLSASEMKQLIDNILEESDIDRDGTINLS 163
Query: 61 EFLKGCLQDEELSKML 76
EF + + +
Sbjct: 164 EFQHVISRSPDFASSF 179
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 61.0 bits (148), Expect = 2e-13
Identities = 14/77 (18%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNR-PADSAEERAKNIFAKMDENNDGQLTQ 59
++D D +G ++ ++++++V + G R A ++ NI + D + DG +
Sbjct: 137 IFDFDDDGTLNREDLSRLVNC---LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 193
Query: 60 DEFLKGCLQDEELSKML 76
EF + + +
Sbjct: 194 SEFQHVISRSPDFASSF 210
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A
{Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 60.6 bits (147), Expect = 3e-13
Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YD+D + I E+ ++++ + + N + A + D++ D ++
Sbjct: 121 LYDLDKDDKISRDELLQVLRMMVGV------NISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 61 EFLKGCLQDEELSKM 75
EF+K + + KM
Sbjct: 175 EFVKVLEKVDVEQKM 189
Score = 33.2 bits (76), Expect = 0.004
Identities = 9/69 (13%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Query: 1 MYDVDGNGVIDIQE-----MTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDG 55
+ +G ++ + + + P +S + F D + D
Sbjct: 69 AFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDD 128
Query: 56 QLTQDEFLK 64
++++DE L+
Sbjct: 129 KISRDELLQ 137
Score = 27.4 bits (61), Expect = 0.32
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 40 ERAKNIFAKMDENNDGQLTQDEFLK 64
R + F +D+ +G L++++F +
Sbjct: 29 TRLYSRFTSLDKGENGTLSREDFQR 53
Score = 25.9 bits (57), Expect = 1.2
Identities = 8/64 (12%), Positives = 17/64 (26%), Gaps = 15/64 (23%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D NG + ++ +I P + I + Q+ F
Sbjct: 39 DKGENGTLSREDFQRI---------------PELAINPLGDRIINAFFSEGEDQVNFRGF 83
Query: 63 LKGC 66
++
Sbjct: 84 MRTL 87
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic,
ER, golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 53.1 bits (127), Expect = 1e-10
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNR-PADSAEERAKNIFAKMDENNDGQLTQ 59
M+D DGN ++D E++ + ++ G+ + D + D+NNDG +
Sbjct: 76 MHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDY 135
Query: 60 DEFLKG 65
EF K
Sbjct: 136 AEFAKS 141
Score = 23.8 bits (51), Expect = 6.5
Identities = 6/28 (21%), Positives = 10/28 (35%)
Query: 37 SAEERAKNIFAKMDENNDGQLTQDEFLK 64
S +E + F D + + L E
Sbjct: 65 SPQELQLHYFKMHDYDGNNLLDGLELST 92
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 51.1 bits (122), Expect = 3e-10
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAK-------NIFAKMDENN 53
++D++ +GV+D QE+ + + + D E + ++ +D N
Sbjct: 28 LHDINSDGVLDEQELEALFTKELEKVY--DPKNEEDDMREMEEERLRMREHVMKNVDTNQ 85
Query: 54 DGQLTQDEFLKGCLQDE 70
D +T +EFL + E
Sbjct: 86 DRLVTLEEFLASTQRKE 102
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein,
calcium-binding protein, NHE1 regulating protein; 2.70A
{Homo sapiens}
Length = 202
Score = 47.1 bits (112), Expect = 3e-08
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YD+D +G I EM ++++ + + + E A + DE+ DG ++
Sbjct: 122 LYDLDRDGKISRHEMLQVLRLMVGV------QVTEEQLENIADRTVQEADEDGDGAVSFV 175
Query: 61 EFLKGCLQDEELSKM 75
EF K + + KM
Sbjct: 176 EFTKSLEKMDVEQKM 190
Score = 28.6 bits (64), Expect = 0.13
Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 8/81 (9%)
Query: 1 MYDVDGNGVIDIQE----MTKIVQAIYDMLGACSSNRPADSAEERAKNIFA-KM-DENND 54
+ DG+ +D + + +P R K +A ++ D + D
Sbjct: 69 SFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRD 128
Query: 55 GQLTQDEFLK--GCLQDEELS 73
G++++ E L+ + +++
Sbjct: 129 GKISRHEMLQVLRLMVGVQVT 149
Score = 26.6 bits (59), Expect = 0.66
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 40 ERAKNIFAKMDENNDGQLTQDEFLK 64
R + F +D N G L++ + +
Sbjct: 29 LRLHHRFRALDRNKKGYLSRMDLQQ 53
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 47.0 bits (112), Expect = 4e-08
Identities = 15/72 (20%), Positives = 32/72 (44%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D +G+G +D E+ + + + M G +S A + E + +D + +G +
Sbjct: 343 KMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYS 402
Query: 61 EFLKGCLQDEEL 72
EF+ + + L
Sbjct: 403 EFVTVAMDRKTL 414
Score = 41.6 bits (98), Expect = 4e-06
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D D +G I E + + G + E K++ +++D+NNDG++ D
Sbjct: 426 MFDSDNSGKISSTE-------LATIFGVSDVD------SETWKSVLSEVDKNNDGEVDFD 472
Query: 61 EFLK 64
EF +
Sbjct: 473 EFQQ 476
Score = 35.1 bits (81), Expect = 0.001
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 37 SAEERA--KNIFAKMDENNDGQLTQDEFLKG 65
S +E IF KMD+N DGQL + E ++G
Sbjct: 330 SQDETKELTAIFHKMDKNGDGQLDRAELIEG 360
Score = 30.8 bits (70), Expect = 0.028
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 11/60 (18%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D D NG I+ E + + S ER + F D +N G+++ E
Sbjct: 392 DFDKNGYIEYSEF----------VTVAMDRKTLLS-RERLERAFRMFDSDNSGKISSTEL 440
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 45.5 bits (108), Expect = 2e-07
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D +G+G +D +E+ ++ + + + EE NI ++D + +G +
Sbjct: 363 KLDKNGDGQLDKKEL---IEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYS 419
Query: 61 EFLKGCLQDEELSK 74
EF+ C+ + L
Sbjct: 420 EFISVCMDKQILFS 433
Score = 42.8 bits (101), Expect = 1e-06
Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D D +G I +E + ++ G +E+ ++ + D+N D + D
Sbjct: 443 LFDTDKSGKITKEE-------LANLFGL------TSISEKTWNDVLGEADQNKDNMIDFD 489
Query: 61 EFLK 64
EF+
Sbjct: 490 EFVS 493
Score = 35.4 bits (82), Expect = 5e-04
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 15 MTKIVQAIYDMLGACSSNRPADSAEERA--KNIFAKMDENNDGQLTQDEFLKG 65
K+ QA +G+ + EER +IF K+D+N DGQL + E ++G
Sbjct: 333 SQKLAQAAILFIGSKLTTL-----EERKELTDIFKKLDKNGDGQLDKKELIEG 380
Score = 31.2 bits (71), Expect = 0.015
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 11/60 (18%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D D NG I+ E + C + S EER + F D + G++T++E
Sbjct: 409 DFDKNGYIEYSEF----------ISVCMDKQILFS-EERLRRAFNLFDTDKSGKITKEEL 457
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora
erythraea} SCOP: a.39.1.5
Length = 176
Score = 43.6 bits (103), Expect = 4e-07
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 7/79 (8%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
V +G + ++ ++ +++ K I D+N DGQ+ DEF
Sbjct: 68 GVGSDGSLTEEQF---IRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEF 124
Query: 63 LKGC----LQDEELSKMLA 77
+ E ++
Sbjct: 125 AAWLTALGMSKAEAAEAFN 143
Score = 42.4 bits (100), Expect = 1e-06
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSS----NRPADSAEERAKNIFAKMDENNDGQ 56
+D DGNG ++ + K Q I + G + ++ + + +DG
Sbjct: 15 RWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGS 74
Query: 57 LTQDEFLKGCLQ 68
LT+++F++
Sbjct: 75 LTEEQFIRVTEN 86
Score = 41.3 bits (97), Expect = 4e-06
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M D + +G I+ E A LG ++ A F ++D N +G+L+ D
Sbjct: 110 MCDKNADGQINADEF----AAWLTALGM---------SKAEAAEAFNQVDTNGNGELSLD 156
Query: 61 EFLK 64
E L
Sbjct: 157 ELLT 160
Score = 29.3 bits (66), Expect = 0.082
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 36 DSAEERAKNIFAKMDENNDGQLTQDEFLKG 65
A +R K F + D + +G L + +F K
Sbjct: 3 AIASDRLKKRFDRWDFDGNGALERADFEKE 32
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 43.5 bits (103), Expect = 8e-07
Identities = 12/77 (15%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADS---AEERAKNIFAKMDENNDGQL 57
D + +G++D E+ + + G S++ + E++ ++ +D + G +
Sbjct: 339 KLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSI 398
Query: 58 TQDEFLKGCLQDEELSK 74
EF+ + L
Sbjct: 399 EYSEFIASAIDRTILLS 415
Score = 42.7 bits (101), Expect = 1e-06
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG+G I +E+ K+ S + E ++I ++D N DG++ +
Sbjct: 425 MFDKDGSGKISTKELFKLF-----------SQADSSIQMEELESIIEQVDNNKDGEVDFN 473
Query: 61 EFLK 64
EF++
Sbjct: 474 EFVE 477
Score = 35.0 bits (81), Expect = 0.001
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 43 KNIFAKMDENNDGQLTQDEFLKG 65
IF K+D NNDG L +DE ++G
Sbjct: 334 TEIFRKLDTNNDGMLDRDELVRG 356
Score = 30.4 bits (69), Expect = 0.039
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 11/60 (18%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D+DG+G I+ E + A + +R + ER + F D++ G+++ E
Sbjct: 391 DMDGSGSIEYSE---FI--------ASAIDRTILLSRERMERAFKMFDKDGSGKISTKEL 439
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 42.9 bits (101), Expect = 1e-06
Identities = 7/79 (8%), Positives = 22/79 (27%), Gaps = 6/79 (7%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D + + + +E K+ + + + +F D + D + + E+
Sbjct: 74 DENEDEQVTKEEWLKMWAEC--VKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEY 131
Query: 63 LKGC----LQDEELSKMLA 77
+ +
Sbjct: 132 STVYMSYGIPKSDCDAAFD 150
Score = 42.5 bits (100), Expect = 1e-06
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKM----DENNDGQ 56
YD + +GVI+ + ++ I ++ + + + A K I+ + DEN D Q
Sbjct: 21 FYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQ 80
Query: 57 LTQDEFLKG 65
+T++E+LK
Sbjct: 81 VTKEEWLKM 89
Score = 41.4 bits (97), Expect = 4e-06
Identities = 8/64 (12%), Positives = 21/64 (32%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D G+ +ID E + + + + F + + +T++
Sbjct: 117 VNDTSGDNIIDKHEYSTVYMSY-------------GIPKSDCDAAFDTLSDGGKTMVTRE 163
Query: 61 EFLK 64
F +
Sbjct: 164 IFAR 167
Score = 24.0 bits (52), Expect = 6.6
Identities = 7/25 (28%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Query: 39 EERAKNIFAKM-DENNDGQLTQDEF 62
+ +F D N+DG + D+F
Sbjct: 11 RNKILRVFNTFYDCNHDGVIEWDDF 35
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 42.6 bits (100), Expect = 1e-06
Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
D++ + V+ +E + + + S + R +F MD + DG + +E
Sbjct: 69 ADINKDDVVSWEEYLAMWEKT--IATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEE 126
Query: 62 FLKGC----LQDEELSKMLA 77
F C LQ ++ +
Sbjct: 127 FQNYCKNFQLQCADVPAVYN 146
Score = 41.8 bits (98), Expect = 2e-06
Identities = 11/72 (15%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSN----RPADSAEERAKNIFAKMDENNDGQ 56
D++ +G I + ++ ++ S+ S E+ +++ + D N D
Sbjct: 17 FLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDV 76
Query: 57 LTQDEFLKGCLQ 68
++ +E+L +
Sbjct: 77 VSWEEYLAMWEK 88
Score = 41.1 bits (96), Expect = 5e-06
Identities = 6/64 (9%), Positives = 19/64 (29%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
DV G+G++D++E + ++ + + +
Sbjct: 113 GMDVSGDGIVDLEEFQNYCKNF-------------QLQCADVPAVYNVITDGGKVTFDLN 159
Query: 61 EFLK 64
+ +
Sbjct: 160 RYKE 163
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 43.1 bits (102), Expect = 1e-06
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D +G+G +D QE ++ + G + E I D + +G +
Sbjct: 354 HIDKNGDGQLDRQE---LIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYS 410
Query: 61 EFLKGCLQDEELSK 74
EF+ + + L
Sbjct: 411 EFVTVAMDRKSLLS 424
Score = 40.5 bits (95), Expect = 1e-05
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D DGNG I + E + + G + K + + +D NNDG + +
Sbjct: 434 KFDQDGNGKISVDE-------LASVFGL------DHLESKTWKEMISGIDSNNDGDVDFE 480
Query: 61 EFLK 64
EF K
Sbjct: 481 EFCK 484
Score = 35.1 bits (81), Expect = 7e-04
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 37 SAEERA--KNIFAKMDENNDGQLTQDEFLKG 65
S EE +IF +D+N DGQL + E + G
Sbjct: 341 SQEETKELTDIFRHIDKNGDGQLDRQELIDG 371
Score = 30.4 bits (69), Expect = 0.038
Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 12/71 (16%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D D NG ID E + + S +++ ++ F K D++ +G+++ DE
Sbjct: 400 DFDRNGYIDYSEF----------VTVAMDRKSLLS-KDKLESAFQKFDQDGNGKISVDE- 447
Query: 63 LKGCLQDEELS 73
L + L
Sbjct: 448 LASVFGLDHLE 458
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence,
southeast collabora structural genomics, secsg,
structural genomics, PSI; HET: CTZ; 1.72A {Renilla
muelleri} PDB: 2hq8_A
Length = 186
Score = 42.4 bits (100), Expect = 1e-06
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D D +G + + E +QA+ L +++A F +D N +GQ+++D
Sbjct: 110 CIDTDKDGYVSLPEFKAFLQAVGPDLT-----------DDKAITCFNTLDFNKNGQISRD 158
Query: 61 EFLK 64
EFL
Sbjct: 159 EFLV 162
Score = 40.9 bits (96), Expect = 5e-06
Identities = 10/68 (14%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
DV G+G I ++ I I + S A+ + + ++ +++ +
Sbjct: 22 RVDVTGDGFISREDYELIAVRIAKIAKL--SAEKAEETRQEFLRVADQLGLAPGVRISVE 79
Query: 61 EFLKGCLQ 68
E
Sbjct: 80 EAAVNATD 87
Score = 35.9 bits (83), Expect = 3e-04
Identities = 10/82 (12%), Positives = 24/82 (29%), Gaps = 10/82 (12%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+ I ++E A ++ ++ +D + DG ++ E
Sbjct: 68 LGLAPGVRISVEEAAVNATDSL----LKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPE 123
Query: 62 F------LKGCLQDEELSKMLA 77
F + L D++
Sbjct: 124 FKAFLQAVGPDLTDDKAITCFN 145
Score = 28.9 bits (65), Expect = 0.095
Identities = 7/45 (15%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 36 DSAEERA--KNIFAKMDENNDGQLTQDEFLKGCLQDEELSKMLAP 78
+ A K ++D DG ++++++ ++ +++K+ A
Sbjct: 8 ERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAE 52
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 42.1 bits (99), Expect = 2e-06
Identities = 7/65 (10%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D+D +G +++ E+ + ++ A ++ + + + F L ++
Sbjct: 44 TFDLDSDGKMEMDEVLYWPDRMRQLVNA--TDEQVEKMRDAVRVFFLHKGVEPVNGLLRE 101
Query: 61 EFLKG 65
++++
Sbjct: 102 DWVEA 106
Score = 41.3 bits (97), Expect = 4e-06
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D DG+G +D+ E+ +++A D +E A F K D + G+L +
Sbjct: 136 VLDDDGDGTVDVDELKTMMKAF-------------DVPQEAAYTFFEKADTDKSGKLERT 182
Query: 61 EFLK 64
E +
Sbjct: 183 ELVH 186
Score = 38.6 bits (90), Expect = 4e-05
Identities = 7/79 (8%), Positives = 22/79 (27%), Gaps = 4/79 (5%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
V+ + ++ + + + + + + +D++ DG + DE
Sbjct: 91 GVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDEL 150
Query: 63 LKGC----LQDEELSKMLA 77
+ E
Sbjct: 151 KTMMKAFDVPQEAAYTFFE 169
Score = 27.1 bits (60), Expect = 0.43
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Query: 37 SAEERA--KNIFAKMDENNDGQLTQDEFLKG 65
+ + F D ++DG++ DE L
Sbjct: 31 HPKMLSRLYKRFDTFDLDSDGKMEMDEVLYW 61
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding
protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB:
2scp_A
Length = 174
Score = 42.0 bits (99), Expect = 2e-06
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D + + I E + MLG + A F +D NNDG L+ +
Sbjct: 102 AVDTNEDNNISRDEY----GIFFGMLGL---------DKTMAPASFDAIDTNNDGLLSLE 148
Query: 61 EFLK 64
EF+
Sbjct: 149 EFVI 152
Score = 40.5 bits (95), Expect = 7e-06
Identities = 14/79 (17%), Positives = 20/79 (25%), Gaps = 10/79 (12%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
V G ID I M + E F +D N D +++DE+
Sbjct: 63 AVAGGKGIDETTF------INSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEY 116
Query: 63 LKGC----LQDEELSKMLA 77
L
Sbjct: 117 GIFFGMLGLDKTMAPASFD 135
Score = 34.7 bits (80), Expect = 0.001
Identities = 5/68 (7%), Positives = 15/68 (22%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D D +G I + + + + + + +
Sbjct: 14 RIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDET 73
Query: 61 EFLKGCLQ 68
F+ +
Sbjct: 74 TFINSMKE 81
Score = 30.8 bits (70), Expect = 0.018
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 37 SAEERAK--NIFAKMDENNDGQLTQDEFLKGC 66
S K F ++D + DG +T+ +F
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMA 32
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 39.6 bits (93), Expect = 5e-06
Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 13/65 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D + +G ++ +E + + A+ +F ++D + DG +T
Sbjct: 35 ACDANRSGRLEREEFRALCTEL-------------RVRPADAEAVFQRLDADRDGAITFQ 81
Query: 61 EFLKG 65
EF +G
Sbjct: 82 EFARG 86
Score = 33.1 bits (76), Expect = 0.001
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFLKGC----LQDEELSKMLA 77
R +++FA D N G+L ++EF C ++ + +
Sbjct: 26 LARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQ 68
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 40.5 bits (95), Expect = 6e-06
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSS----NRPADSAEERAKNIFAKMDENNDGQ 56
+D DGNG ID + + +A+ G + AE + + D + D +
Sbjct: 12 TFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQR 71
Query: 57 LTQDEFL 63
+T++EF+
Sbjct: 72 ITREEFV 78
Score = 39.7 bits (93), Expect = 1e-05
Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 8/79 (10%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D DG+ I +E +R A+ A D + DG +T +
Sbjct: 65 DRDGDQRITREEFVTGAVKRLRD----KPDRFAEMARPFLHAALGVADTDGDGAVTVADT 120
Query: 63 LKGC----LQDEELSKMLA 77
+ + ++ + A
Sbjct: 121 ARALTAFGVPEDLARQAAA 139
Score = 39.7 bits (93), Expect = 1e-05
Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D DG+G + + + G E+ A+ A +D + DG++ +
Sbjct: 106 VADTDGDGAVTVADT----ARALTAFGV---------PEDLARQAAAALDTDGDGKVGET 152
Query: 61 EFLK 64
E +
Sbjct: 153 EIVP 156
Score = 30.5 bits (69), Expect = 0.026
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 38 AEERAKNIFAKMDENNDGQLTQDEF 62
E R F D++ +G + + +F
Sbjct: 2 YERRIAARFTTFDQDGNGHIDRSDF 26
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent
kinase, structural genomics, structural GE consortium,
SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 40.3 bits (95), Expect = 7e-06
Identities = 15/72 (20%), Positives = 33/72 (45%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D +G+G +D +E+ + + + G S+ + E +I +D + +G +
Sbjct: 48 QLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYS 107
Query: 61 EFLKGCLQDEEL 72
EF+ C+ + L
Sbjct: 108 EFVTVCMDKQLL 119
Score = 31.5 bits (72), Expect = 0.014
Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D DG+G I +E+ ++ + +E + + D+NNDG++ +
Sbjct: 131 QFDSDGSGKITNEELGRLFGVT-------------EVDDETWHQVLQECDKNNDGEVDFE 177
Query: 61 EFLK 64
EF++
Sbjct: 178 EFVE 181
Score = 30.7 bits (70), Expect = 0.024
Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 15/78 (19%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D D NG I+ E ++ + ER F + D + G++T +E
Sbjct: 97 DFDRNGYIEYSE-----------FVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL 145
Query: 63 LKGC----LQDEELSKML 76
+ + DE ++L
Sbjct: 146 GRLFGVTEVDDETWHQVL 163
Score = 29.2 bits (66), Expect = 0.075
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 37 SAEERA--KNIFAKMDENNDGQLTQDEFLKG 65
+ EE IF ++D N DGQL + E ++G
Sbjct: 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEG 65
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 37.5 bits (88), Expect = 2e-05
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
DV+G+G + +E+ V + E+ + IF +D + +G++ Q+
Sbjct: 8 EIDVNGDGAVSYEEVKAFVSKKRAIK-----------NEQLLQLIFKSIDADGNGEIDQN 56
Query: 61 EFLK 64
EF K
Sbjct: 57 EFAK 60
Score = 30.6 bits (70), Expect = 0.009
Identities = 7/39 (17%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
Query: 43 KNIFAKMDENNDGQLTQDEFLKGC------LQDEELSKM 75
+ +F ++D N DG ++ +E ++ L +
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLI 41
Score = 27.9 bits (63), Expect = 0.10
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAI 22
D DGNG ID E K +I
Sbjct: 44 SIDADGNGEIDQNEFAKFYGSI 65
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein;
HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB:
1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 39.4 bits (92), Expect = 2e-05
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D D NG I + E +A + + E + F D + GQL D
Sbjct: 117 IVDKDQNGAITLDEWKAYTKAAGIIQ-----------SSEDCEETFRVCDIDESGQLDVD 165
Query: 61 EFLK 64
E +
Sbjct: 166 EMTR 169
Score = 31.7 bits (72), Expect = 0.011
Identities = 10/86 (11%), Positives = 24/86 (27%), Gaps = 11/86 (12%)
Query: 3 DVDGNGV-----IDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQL 57
G G+ D + + + + +F +D++ +G +
Sbjct: 67 FFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAI 126
Query: 58 TQDEF------LKGCLQDEELSKMLA 77
T DE+ E+ +
Sbjct: 127 TLDEWKAYTKAAGIIQSSEDCEETFR 152
Score = 29.4 bits (66), Expect = 0.070
Identities = 8/32 (25%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 36 DSAEERA--KNIFAKMDENNDGQLTQDEFLKG 65
D+ K++F +D N++G+++ DE +
Sbjct: 10 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYK 41
Score = 26.7 bits (59), Expect = 0.59
Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 13/71 (18%)
Query: 1 MYDVDGNGVIDIQEMTKIVQ-AIYDMLGACSSNRPADSAEERAKNIFAKMDENNDG---- 55
DV+ NG I + EM + + LGA + + + G
Sbjct: 24 FLDVNHNGKISLDEMVYKASDIVINNLGATPE-------QAKRHKDAVEAFFGGAGMKYG 76
Query: 56 -QLTQDEFLKG 65
+ +++G
Sbjct: 77 VETDWPAYIEG 87
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand,
helix-loop- helix, nervous system, metal binding
protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Length = 83
Score = 36.8 bits (86), Expect = 5e-05
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D +G+G + E+ Q L A D +E + + D+N+DG+++++
Sbjct: 15 KLDANGDGYVTALEL----QTFMVTLDA-YKALSKDKVKEASAKLIKMADKNSDGKISKE 69
Query: 61 EFLK 64
EFL
Sbjct: 70 EFLN 73
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 38.0 bits (89), Expect = 5e-05
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YD+D +G I E+ ++++ M+G +N ++ D++ DG+++ +
Sbjct: 83 IYDMDKDGYISNGELFQVLKM---MVG---NNLKDTQLQQIVDKTIINADKDGDGRISFE 136
Query: 61 EFLK 64
EF
Sbjct: 137 EFCA 140
Score = 27.6 bits (62), Expect = 0.32
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 17/83 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DGNG +D +E + S E++ + F D + DG ++
Sbjct: 46 IFDTDGNGEVDFKE----------FIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNG 95
Query: 61 EFLKGC-------LQDEELSKML 76
E + L+D +L +++
Sbjct: 96 ELFQVLKMMVGNNLKDTQLQQIV 118
Score = 26.0 bits (58), Expect = 0.89
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 40 ERAKNIFAKMDENNDGQLTQDEFLKG 65
+R F K+D +N G L+ +EF+
Sbjct: 6 KRLGKRFKKLDLDNSGSLSVEEFMSL 31
Score = 24.1 bits (53), Expect = 5.2
Identities = 9/63 (14%), Positives = 22/63 (34%), Gaps = 15/63 (23%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D+D +G + ++E + P + + D + +G++
Sbjct: 14 KLDLDNSGSLSVEEFMSL---------------PELQQNPLVQRVIDIFDTDGNGEVDFK 58
Query: 61 EFL 63
EF+
Sbjct: 59 EFI 61
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 38.3 bits (89), Expect = 6e-05
Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 10/64 (15%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D D +G + +E+ K +SA ++ ++ F+ +D ++ L+
Sbjct: 261 FADFDKSGQLSKEEVQK----------VLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQ 310
Query: 61 EFLK 64
EF+
Sbjct: 311 EFVM 314
Score = 36.7 bits (85), Expect = 2e-04
Identities = 10/72 (13%), Positives = 21/72 (29%), Gaps = 12/72 (16%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D + NG + +E + + + +F DE+ +
Sbjct: 196 KIDTNSNGTLSRKEFREHFVRLGFDK------------KSVQDALFRYADEDESDDVGFS 243
Query: 61 EFLKGCLQDEEL 72
E++ L L
Sbjct: 244 EYVHLGLCLLVL 255
Score = 33.6 bits (77), Expect = 0.003
Identities = 10/74 (13%), Positives = 21/74 (28%), Gaps = 11/74 (14%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
V G+G Q+ L + E K +F ++ + G+++
Sbjct: 130 SSAVSGSGKFSFQD-----------LKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYI 178
Query: 61 EFLKGCLQDEELSK 74
+ L
Sbjct: 179 TLVAVANDLAALVA 192
Score = 29.4 bits (66), Expect = 0.080
Identities = 6/48 (12%), Positives = 17/48 (35%), Gaps = 8/48 (16%)
Query: 37 SAEERA--KNIFAKMDENNDGQLTQDEFLKGC------LQDEELSKML 76
S E+ + +F + G+ + + + + + L K+
Sbjct: 117 SEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLF 164
Score = 28.6 bits (64), Expect = 0.14
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 17/74 (22%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M + D G + + + + + F K+D N++G L++
Sbjct: 166 MVENDTKGRMSYITLVAVANDLAAL-----------------VADFRKIDTNSNGTLSRK 208
Query: 61 EFLKGCLQDEELSK 74
EF + ++ K
Sbjct: 209 EFREHFVRLGFDKK 222
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR
{Rattus norvegicus} PDB: 2g9b_A
Length = 263
Score = 37.9 bits (88), Expect = 7e-05
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
YD D +G I+ +E+ + D+L + E + D NNDG+L
Sbjct: 111 KYDTDHSGFIETEEL---KNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELT 167
Query: 61 EFLK 64
E +
Sbjct: 168 EMAR 171
Score = 34.8 bits (80), Expect = 8e-04
Identities = 9/62 (14%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + +G +++ EM +++ + L + + F D++ +G + ++
Sbjct: 155 LFDSNNDGKLELTEMARLLPVQENFLLK---FQGIKMCGKEFNKAFELYDQDGNGYIDEN 211
Query: 61 EF 62
E
Sbjct: 212 EL 213
Score = 34.5 bits (79), Expect = 0.001
Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D DG+G ++ +E+ ++Q L + + E K + + +DG++
Sbjct: 24 HFDADGSGYLEGKELQNLIQE----LLQARKKAGLELSPE-MKTFVDQYGQRDDGKIGIV 78
Query: 61 EFLK 64
E
Sbjct: 79 ELAH 82
Score = 33.3 bits (76), Expect = 0.004
Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
Y +G I I E+ ++ + L + E + K D ++ G + +E
Sbjct: 67 YGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMK--TWRKYDTDHSGFIETEE 124
Query: 62 F 62
Sbjct: 125 L 125
Score = 31.8 bits (72), Expect = 0.012
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YD DGNG ID E+ +++ + + + M ++ G+L +
Sbjct: 199 LYDQDGNGYIDENELDALLKDLCEKNK------QELDINNISTYKKNIMALSDGGKLYRT 252
Query: 61 EF 62
+
Sbjct: 253 DL 254
Score = 24.1 bits (52), Expect = 6.6
Identities = 7/27 (25%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 43 KNIFAKMDENNDGQLTQDEFLKGCLQD 69
I+ D + G L E L+ +Q+
Sbjct: 19 FEIWLHFDADGSGYLEGKE-LQNLIQE 44
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium
binding, EF-hand superfamily, S genomics, protein
structure initiative, PSI; 2.10A {Danio rerio} PDB:
2q4u_A
Length = 272
Score = 38.1 bits (88), Expect = 7e-05
Identities = 10/61 (16%), Positives = 22/61 (36%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
YD +G + I+E+ ++ + I+ K D ++ G ++ E
Sbjct: 66 YDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAE 125
Query: 62 F 62
Sbjct: 126 L 126
Score = 37.7 bits (87), Expect = 7e-05
Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
YDV G ++ E+ V+ DM+ + ++ + + D N DG++ +
Sbjct: 204 HYDVSRTGALEGPEVDGFVK---DMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKS 260
Query: 61 EFLK 64
E
Sbjct: 261 ELAL 264
Score = 36.2 bits (83), Expect = 3e-04
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
YD D +G I E+ + D+ P + +E + D+N DG+L +
Sbjct: 112 KYDADSSGYISAAELK---NFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLN 168
Query: 61 EFLK 64
+ +
Sbjct: 169 DLAR 172
Score = 35.8 bits (82), Expect = 4e-04
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D D NG I+ +E+ + + L + ++ K+ + D DG+L +
Sbjct: 19 HFDADDNGYIEGKELDDFFRHMLKKLQP-KDKITDERVQQIKKSFMSAYDATFDGRLQIE 77
Query: 61 EFLKGCLQDEE 71
E L EE
Sbjct: 78 ELANMILPQEE 88
Score = 33.5 bits (76), Expect = 0.003
Identities = 12/63 (19%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADS-AEERAKNIFAKMDENNDGQLTQ 59
++D + +G +D+ ++ +I+ + L + + + + IFA D + G L
Sbjct: 156 IFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEG 215
Query: 60 DEF 62
E
Sbjct: 216 PEV 218
Score = 25.0 bits (54), Expect = 3.0
Identities = 4/20 (20%), Positives = 9/20 (45%)
Query: 43 KNIFAKMDENNDGQLTQDEF 62
I+ D +++G + E
Sbjct: 14 LQIWQHFDADDNGYIEGKEL 33
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated,
SEN membrane targeting, EF-hand, cell projection,
cilium; 2.00A {Trypanosoma cruzi}
Length = 219
Score = 38.0 bits (88), Expect = 8e-05
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 10/64 (15%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D GN ++D +E + A + E +F ++D+N G +T D
Sbjct: 138 EIDASGNMLVDEEEFKR----------AVPKLEAWGAKVEDPAALFKELDKNGTGSVTFD 187
Query: 61 EFLK 64
EF
Sbjct: 188 EFAA 191
Score = 29.9 bits (67), Expect = 0.057
Identities = 7/82 (8%), Positives = 23/82 (28%), Gaps = 18/82 (21%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
++ G D + +F ++D + + + ++EF
Sbjct: 104 KLENKGSED-----------FVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEF 152
Query: 63 LKGC-------LQDEELSKMLA 77
+ + E+ + +
Sbjct: 153 KRAVPKLEAWGAKVEDPAALFK 174
Score = 29.1 bits (65), Expect = 0.096
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 40 ERAKNIFAKMDENNDGQLTQDEFLKGCLQ 68
+R +F K D+N G+L DE GCL+
Sbjct: 48 QRRIELFKKFDKNETGKLCYDEVYSGCLE 76
Score = 26.0 bits (57), Expect = 1.2
Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 5/77 (6%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERA--KNIFAKMDENNDGQLT 58
+D + G + E + ++L +RA K+ N G
Sbjct: 56 KFDKNETGKLCYDE---VYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSED 112
Query: 59 QDEFLKGCLQDEELSKM 75
EFL+ L +
Sbjct: 113 FVEFLEFRLMLCYIYDF 129
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom
consortium, SGC, ATP-binding; 1.15A {Plasmodium
falciparum} PDB: 3o4y_A
Length = 191
Score = 37.2 bits (87), Expect = 9e-05
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++DVD +G I E+ I + R K + +D+NNDG++
Sbjct: 130 VFDVDNDGEITTAELAHI------LYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFH 183
Query: 61 EFLK 64
EF +
Sbjct: 184 EFSE 187
Score = 34.1 bits (79), Expect = 0.001
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 12/74 (16%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D DG G I +++ + + G + ++D + G++
Sbjct: 60 VLDEDGKGYITKEQL----KKGLEKDGL--------KLPYNFDLLLDQIDSDGSGKIDYT 107
Query: 61 EFLKGCLQDEELSK 74
EF+ L ++LSK
Sbjct: 108 EFIAAALDRKQLSK 121
Score = 31.1 bits (71), Expect = 0.019
Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 7/48 (14%)
Query: 37 SAEERA--KNIFAKMDENNDGQLTQDEFLK-----GCLQDEELSKMLA 77
+ + K+ F +DE+ G +T+++ K G +L
Sbjct: 47 NDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLD 94
Score = 27.2 bits (61), Expect = 0.41
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 18/63 (28%)
Query: 3 DVDGNGVIDIQE---MTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQ 59
D DG+G ID E + + +++ F D +NDG++T
Sbjct: 97 DSDGSGKIDYTEFIAAALDRKQL---------------SKKLIYCAFRVFDVDNDGEITT 141
Query: 60 DEF 62
E
Sbjct: 142 AEL 144
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium
binding protein, apoptosis, calcium, endoplasmic
reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB:
2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Length = 172
Score = 37.2 bits (87), Expect = 1e-04
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
YD D +G+ID E+ + + L ++ + K D GQ+ D
Sbjct: 82 TYDRDNSGMIDKNELKQALSGFGYRLS-----------DQFHDILIRKFDRQGRGQIAFD 130
Query: 61 EFLKGCLQDEELSKM 75
+F++GC+ + L+ +
Sbjct: 131 DFIQGCIVLQRLTDI 145
Score = 26.0 bits (58), Expect = 1.0
Identities = 7/30 (23%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFLKGCLQ 68
+ N+F ++D++ G ++ E L+ L
Sbjct: 6 QSFLWNVFQRVDKDRSGVISDTE-LQQALS 34
Score = 24.5 bits (54), Expect = 4.2
Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 10/63 (15%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D D +GVI E+ Q N ++I + D N +
Sbjct: 15 RVDKDRSGVISDTEL----QQALSNGTWTPFN------PVTVRSIISMFDRENKAGVNFS 64
Query: 61 EFL 63
EF
Sbjct: 65 EFT 67
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP,
structural genomics, PSI; 1.95A {Leishmania major} SCOP:
a.39.1.8
Length = 191
Score = 36.5 bits (85), Expect = 2e-04
Identities = 11/74 (14%), Positives = 26/74 (35%), Gaps = 11/74 (14%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D G+G +D E+ + + + E+ + + K D G L D
Sbjct: 101 KRDSSGDGRLDSNEVRAALLSSGYQVS-----------EQTFQALMRKFDRQRRGSLGFD 149
Query: 61 EFLKGCLQDEELSK 74
++++ + +
Sbjct: 150 DYVELSIFVCRVRN 163
Score = 25.0 bits (55), Expect = 2.3
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D DG+G I + E L A S+ + + + D+N+ G++T D
Sbjct: 35 AVDTDGSGAISVPE-----------LNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFD 83
Query: 61 EFLK 64
EF
Sbjct: 84 EFKD 87
Score = 24.2 bits (53), Expect = 5.5
Identities = 12/72 (16%), Positives = 21/72 (29%), Gaps = 27/72 (37%)
Query: 2 YDVDGNGVIDIQE----MTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQL 57
+D G + + + R +N+FA D GQ+
Sbjct: 138 FDRQRRGSLGFDDYVELSIFV---------------------CRVRNVFAFYDRERTGQV 176
Query: 58 TQD--EFLKGCL 67
T F+ G +
Sbjct: 177 TFTFDTFIGGSV 188
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform
A; EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 35.5 bits (82), Expect = 2e-04
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D I +E I +L +E+ ++ +M N G+L
Sbjct: 32 NFDTMKTNTISREEFRAICNRRVQILT-----------DEQFDRLWNEMPVNAKGRLKYP 80
Query: 61 EFLK 64
+FL
Sbjct: 81 DFLS 84
Score = 31.3 bits (71), Expect = 0.011
Identities = 8/44 (18%), Positives = 15/44 (34%), Gaps = 6/44 (13%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFLKGC------LQDEELSKML 76
F D ++++EF C L DE+ ++
Sbjct: 23 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLW 66
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix,
structural genomics, protein structure initiative; NMR
{Arabidopsis thaliana} SCOP: a.39.1.5
Length = 67
Score = 34.0 bits (79), Expect = 4e-04
Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D + +G + + E ++ A + +E F ++D + +G+L D
Sbjct: 9 KFDKNKDGKLSLDEFREVALA----FSPYFT-------QEDIVKFFEEIDVDGNGELNAD 57
Query: 61 EFLK 64
EF
Sbjct: 58 EFTS 61
Score = 27.1 bits (61), Expect = 0.18
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Query: 43 KNIFAKMDENNDGQLTQDEF------LKGCLQDEELSKMLA 77
K +F K D+N DG+L+ DEF E++ K
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFE 44
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 35.3 bits (82), Expect = 4e-04
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D + NG + +E+ ++ ++ + I +D N+ G +T
Sbjct: 47 KLDTNHNGSLSHREIYTVLASVGI-------------KKWDINRILQALDINDRGNITYT 93
Query: 61 EFLKGCLQDEELSK 74
EF+ GC + + +
Sbjct: 94 EFMAGCYRWKNIES 107
Score = 32.3 bits (74), Expect = 0.006
Identities = 11/69 (15%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 13 QEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEFLKG----CLQ 68
+ + I I +++ S +F K+D N++G L+ E ++
Sbjct: 14 MKHSNIRNIIINIMAHELSVINNHIKY--INELFYKLDTNHNGSLSHREIYTVLASVGIK 71
Query: 69 DEELSKMLA 77
+++++L
Sbjct: 72 KWDINRILQ 80
Score = 30.0 bits (68), Expect = 0.045
Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 16/79 (20%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D++ G I E + C + + K F K+D++ DG +++ +
Sbjct: 83 DINDRGNITYTEF----------MAGCYRWKNIE--STFLKAAFNKIDKDEDGYISKSDI 130
Query: 63 LKGC----LQDEELSKMLA 77
+ L + ++
Sbjct: 131 VSLVHDKVLDNNDIDNFFL 149
Score = 25.7 bits (57), Expect = 1.5
Identities = 8/64 (12%), Positives = 15/64 (23%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D D +G I ++ + + N F + G +
Sbjct: 116 KIDKDEDGYISKSDIVSL------VHDKVLD-------NNDIDNFFLSVHSIKKGIPREH 162
Query: 61 EFLK 64
K
Sbjct: 163 IINK 166
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 35.4 bits (82), Expect = 5e-04
Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 12/84 (14%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDEN-NDGQLTQ 59
D G+GV+ + ++ + +Y + +E + D + DGQ+T
Sbjct: 117 KLDRSGDGVVTVDDL----RGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTL 172
Query: 60 DEFLK-------GCLQDEELSKML 76
EF DEE M+
Sbjct: 173 AEFQDYYSGVSASMNTDEEFVAMM 196
Score = 31.9 bits (73), Expect = 0.008
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+D +G+G +D++E + + + + E FAK+D + DG +T D+
Sbjct: 82 WDRNGSGTLDLEEFLRAL-----------RPPMSQAREAVIAAAFAKLDRSGDGVVTVDD 130
Query: 62 FLKGCLQDEELSKML 76
L+G K+
Sbjct: 131 -LRGVYSGRAHPKVR 144
Score = 31.2 bits (71), Expect = 0.015
Identities = 9/41 (21%), Positives = 14/41 (34%), Gaps = 6/41 (14%)
Query: 43 KNIFAKMDENNDGQLTQDEFLKGC------LQDEELSKMLA 77
F ++D + L DEF +G L E +
Sbjct: 40 ARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCR 80
Score = 29.6 bits (67), Expect = 0.056
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D DG+ +D E + + LG + A+ + K D N G L +
Sbjct: 45 QLDRDGSRSLDADEFRQGLAK----LGLVLD-------QAEAEGVCRKWDRNGSGTLDLE 93
Query: 61 EFL 63
EFL
Sbjct: 94 EFL 96
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural
genomics, seattle S genomics center for infectious
disease, ssgcid; 1.90A {Entamoeba histolytica} PDB:
3sia_A 3sib_A
Length = 220
Score = 34.4 bits (79), Expect = 0.001
Identities = 6/69 (8%), Positives = 21/69 (30%), Gaps = 14/69 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAI-YDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQ 59
M +G ++ E+ +Q + + + +R + ++
Sbjct: 125 MNARARSGTLEPHEILPALQQLGFYI-------------NQRTSLLLHRLFARGMAFCDL 171
Query: 60 DEFLKGCLQ 68
+ ++ C
Sbjct: 172 NCWIAICAF 180
Score = 33.2 bits (76), Expect = 0.003
Identities = 11/62 (17%), Positives = 17/62 (27%), Gaps = 17/62 (27%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D D NG I E + + + N+F G L
Sbjct: 95 IFDTDFNGHISFYEFMAMYKFMELA-----------------YNLFVMNARARSGTLEPH 137
Query: 61 EF 62
E
Sbjct: 138 EI 139
Score = 30.9 bits (70), Expect = 0.021
Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D D +G ++I E L + + A + D + +G ++
Sbjct: 59 GVDRDRSGTLEINE-----------LMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 61 EFLK 64
EF+
Sbjct: 108 EFMA 111
Score = 29.0 bits (65), Expect = 0.095
Identities = 8/46 (17%), Positives = 14/46 (30%), Gaps = 8/46 (17%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFLKGCLQ-------DEELSKMLA 77
R F +D + G L +E L + +M+
Sbjct: 50 YTRIYQWFMGVDRDRSGTLEINE-LMMGQFPGGIRLSPQTALRMMR 94
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT
calmodulin chimera; calcium sensor, fluorescent protein;
HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A*
3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A*
3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 34.1 bits (78), Expect = 0.002
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DGNG I E+ ++ + + L + EE + + D + DGQ+ +
Sbjct: 393 VFDKDGNGYISAAELRHVMTNLGEKL----------TDEE-VDEMIREADIDGDGQVNYE 441
Query: 61 EFLK 64
EF++
Sbjct: 442 EFVQ 445
Score = 27.9 bits (62), Expect = 0.24
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG+G I +E+ ++++ LG + E +++ ++D + +G +
Sbjct: 320 LFDKDGDGTITTKELGTVMRS----LGQNPT-------EAELQDMINEVDADGNGTIDFP 368
Query: 61 EFL 63
EFL
Sbjct: 369 EFL 371
Score = 25.2 bits (55), Expect = 2.1
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 20/83 (24%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEE--RAKNIFAKMDENNDGQLTQ 59
D DGNG ID E ++ + DS EE A +F D++ +G ++
Sbjct: 357 VDADGNGTIDFPEFLTMMARKM---------KDTDSEEEIREAFRVF---DKDGNGYISA 404
Query: 60 DEF------LKGCLQDEELSKML 76
E L L DEE+ +M+
Sbjct: 405 AELRHVMTNLGEKLTDEEVDEMI 427
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus}
SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 33.0 bits (76), Expect = 0.002
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 8/64 (12%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D D +G +D E+ +Q + E K++ D + DG++ D
Sbjct: 49 FIDNDQSGYLDGDELKYFLQKFQSDARELT--------ESETKSLMDAADNDGDGKIGAD 100
Query: 61 EFLK 64
EF +
Sbjct: 101 EFQE 104
Score = 27.2 bits (61), Expect = 0.32
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 11/49 (22%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFLKGCLQ----------DEELSKMLA 77
+ K+IF +D + G L DE LK LQ + E ++
Sbjct: 40 ASQVKDIFRFIDNDQSGYLDGDE-LKYFLQKFQSDARELTESETKSLMD 87
Score = 23.8 bits (52), Expect = 6.1
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 3 DVDGNGVIDIQEMTKIVQA 21
D DG+G I E ++V +
Sbjct: 90 DNDGDGKIGADEFQEMVHS 108
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP:
a.39.1.4
Length = 109
Score = 33.0 bits (76), Expect = 0.002
Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 8/64 (12%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D D +G I+ E+ +Q A + + K D + DG + D
Sbjct: 50 VIDQDKSGFIEEDELKLFLQVFSAGARALT--------DAETKAFLKAGDSDGDGAIGVD 101
Query: 61 EFLK 64
E+
Sbjct: 102 EWAA 105
Score = 27.2 bits (61), Expect = 0.36
Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 24/87 (27%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ + + + V + K F +D++ G + +D
Sbjct: 16 LKACEAADSFNYKAFFAKVGLTAKS-------------ADDIKKAFFVIDQDKSGFIEED 62
Query: 61 EFLKGCLQ----------DEELSKMLA 77
E LK LQ D E L
Sbjct: 63 E-LKLFLQVFSAGARALTDAETKAFLK 88
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 32.8 bits (75), Expect = 0.002
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 37 SAEERAK--NIFAKMDENNDGQLTQDE----FLKGCLQDEELSKM 75
S E+AK IF K D++ DG ++ E FLK L L+ +
Sbjct: 5 SPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHI 49
Score = 30.1 bits (68), Expect = 0.027
Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 13/65 (20%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
D D +G + E+ +I + P +I++ D + G+L++D+
Sbjct: 19 TDKDMDGFVSGLEVREIFL---------KTGLP----STLLAHIWSLCDTKDCGKLSKDQ 65
Query: 62 FLKGC 66
F
Sbjct: 66 FALAF 70
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A
{Plasmodium falciparum K1}
Length = 197
Score = 32.9 bits (76), Expect = 0.004
Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D+DGNG I ++E+ +I + ++ ++ ++D N DG++
Sbjct: 137 FFDIDGNGKISVEELKRIFGR---------DDIENPLIDKAIDSLLQEVDLNGDGEIDFH 187
Query: 61 EFLK 64
EF+
Sbjct: 188 EFML 191
Score = 32.2 bits (74), Expect = 0.008
Identities = 14/80 (17%), Positives = 24/80 (30%), Gaps = 17/80 (21%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
DVD +G + QE+ ++ I + +D N GQ+
Sbjct: 65 ALDVDNSGTLSSQEILDGLKKIGYQK-----------IPPDIHQVLRDIDSNASGQIHYT 113
Query: 61 EFLKGCLQ------DEELSK 74
+FL + E
Sbjct: 114 DFLAATIDKQTYLKKEVCLI 133
Score = 31.0 bits (71), Expect = 0.018
Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 8/49 (16%)
Query: 37 SAEERA--KNIFAKMDENNDGQLTQDEFLKG------CLQDEELSKMLA 77
E +NIF +D +N G L+ E L G ++ ++L
Sbjct: 52 CDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLR 100
Score = 28.3 bits (64), Expect = 0.14
Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 19/82 (23%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D + +G I + A + ++ +E F D + +G+++ +E
Sbjct: 103 DSNASGQIHYTDFL-----------AATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEEL 151
Query: 63 --------LKGCLQDEELSKML 76
++ L D+ + +L
Sbjct: 152 KRIFGRDDIENPLIDKAIDSLL 173
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP:
a.39.1.10
Length = 78
Score = 31.8 bits (73), Expect = 0.004
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 12/64 (18%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D +G+G I + E+T ++ LG+ S + + + A++D + DG + +
Sbjct: 11 RFDTNGDGKISLSELTDALRT----LGSTS--------ADEVQRMMAEIDTDGDGFIDFN 58
Query: 61 EFLK 64
EF+
Sbjct: 59 EFIS 62
Score = 23.7 bits (52), Expect = 4.7
Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFLK-----GCLQDEELSKMLA 77
+ + IF + D N DG+++ E G +E+ +M+A
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMA 45
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 32.5 bits (75), Expect = 0.004
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
D DGNG ID E K +I + + K ++ MD + DG+LT++E
Sbjct: 46 DADGNGEIDQNEFAKFYGSI--------QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV 97
Query: 63 LK--GCLQDEELSKMLA 77
E++++ +
Sbjct: 98 TSFFKKHGIEKVAEQVM 114
Score = 30.6 bits (70), Expect = 0.025
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
DV+G+G + +E+ V A + E+ + IF +D + +G++ Q+
Sbjct: 8 EIDVNGDGAVSYEEVKAFVSK----KRAIKN-------EQLLQLIFKSIDADGNGEIDQN 56
Query: 61 EFLK 64
EF K
Sbjct: 57 EFAK 60
Score = 29.8 bits (68), Expect = 0.045
Identities = 7/41 (17%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Query: 43 KNIFAKMDENNDGQLTQDEFLKG------CLQDEELSKMLA 77
+ +F ++D N DG ++ +E ++ L +
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFK 43
Score = 29.8 bits (68), Expect = 0.046
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 15/64 (23%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ DVDG+G + +E+ + + G E+ K D N DG +T +
Sbjct: 83 LMDVDGDGKLTKEEV----TSFFKKHG-----------IEKVAEQVMKADANGDGYITLE 127
Query: 61 EFLK 64
EFL+
Sbjct: 128 EFLE 131
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding
protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP:
a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A
1rk9_A 1g33_A
Length = 109
Score = 32.3 bits (74), Expect = 0.005
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 8/64 (12%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D D +G I+ E+ I++ S + K + A D++ DG++ +
Sbjct: 49 ILDKDKSGFIEEDELGSILKGFSSDARDLS--------AKETKTLMAAGDKDGDGKIGVE 100
Query: 61 EFLK 64
EF
Sbjct: 101 EFST 104
Score = 26.5 bits (59), Expect = 0.56
Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 11/49 (22%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFLKGCLQ----------DEELSKMLA 77
+ K +F +D++ G + +DE L L+ +E ++A
Sbjct: 40 ADDVKKVFHILDKDKSGFIEEDE-LGSILKGFSSDARDLSAKETKTLMA 87
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 32.0 bits (73), Expect = 0.005
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 19/84 (22%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D +G + + I+ S+ P I+ D + DG+LT +
Sbjct: 22 SHDKTMSGHLTGPQARTILM---------QSSLPQAQLAS----IWNLSDIDQDGKLTAE 68
Query: 61 EFLKG------CLQDEELSKMLAP 78
EF+ + + L +L P
Sbjct: 69 EFILAMHLIDVAMSGQPLPPVLPP 92
Score = 31.7 bits (72), Expect = 0.008
Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 6/45 (13%)
Query: 37 SAEERAK--NIFAKMDENNDGQLTQDE----FLKGCLQDEELSKM 75
R K +F D+ G LT + ++ L +L+ +
Sbjct: 9 PQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASI 53
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium
binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Length = 108
Score = 31.9 bits (73), Expect = 0.006
Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 8/64 (12%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D D +G I+ E+ +Q + K A D + DG++ +
Sbjct: 49 ILDNDQSGFIEEDELKYFLQRFESGARVLT--------ASETKTFLAAADHDGDGKIGAE 100
Query: 61 EFLK 64
EF +
Sbjct: 101 EFQE 104
Score = 25.3 bits (56), Expect = 1.5
Identities = 17/87 (19%), Positives = 27/87 (31%), Gaps = 24/87 (27%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D ++ +I S+ + K IF +D + G + +D
Sbjct: 15 LRDCQAPDSFSPKKFFQIS------------GMSKKSSSQL-KEIFRILDNDQSGFIEED 61
Query: 61 EFLKGCLQ----------DEELSKMLA 77
E LK LQ E LA
Sbjct: 62 E-LKYFLQRFESGARVLTASETKTFLA 87
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4
PDB: 2pas_A 3pat_A
Length = 110
Score = 31.8 bits (73), Expect = 0.006
Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 8/64 (12%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D D +G I+ +E+ ++++ + + K D++ DG++ D
Sbjct: 50 AIDADASGFIEEEELKFVLKSFAADGRDLT--------DAETKAFLKAADKDGDGKIGID 101
Query: 61 EFLK 64
EF
Sbjct: 102 EFET 105
Score = 23.7 bits (52), Expect = 6.7
Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 24/87 (27%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ V G + ++ +V A SA + K +F +D + G + ++
Sbjct: 16 LDAVKAEGSFNHKKFFALV------------GLKAMSAND-VKKVFKAIDADASGFIEEE 62
Query: 61 EFLKGCLQ----------DEELSKMLA 77
E LK L+ D E L
Sbjct: 63 E-LKFVLKSFAADGRDLTDAETKAFLK 88
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 32.4 bits (74), Expect = 0.007
Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG+G I + E + ++E + F D +N G L D
Sbjct: 121 IFDKDGSGTITLDEWKAYGKISGISP-----------SQEDCEATFRHCDLDNAGDLDVD 169
Query: 61 EFLK 64
E +
Sbjct: 170 EMTR 173
Score = 26.2 bits (58), Expect = 0.83
Identities = 8/31 (25%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 37 SAEERA--KNIFAKMDENNDGQLTQDEFLKG 65
+ K++F +D N +G++T DE +
Sbjct: 15 NPRWIKRHKHMFDFLDINGNGKITLDEIVSK 45
Score = 26.2 bits (58), Expect = 0.97
Identities = 9/80 (11%), Positives = 21/80 (26%), Gaps = 6/80 (7%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
++ I + + + + E +F D++ G +T DE+
Sbjct: 76 GMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEW 135
Query: 63 ------LKGCLQDEELSKML 76
E+
Sbjct: 136 KAYGKISGISPSQEDCEATF 155
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer,
domain-swapping, EF-hand; 1.75A {Chenopodium album}
SCOP: a.39.1.10 PDB: 1h4b_A
Length = 86
Score = 31.1 bits (71), Expect = 0.007
Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 12/64 (18%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D +G+G I E+ ++ LG+ + + + + A++D + DG ++ D
Sbjct: 19 RFDTNGDGKISSSELGDALKT----LGSVT--------PDEVRRMMAEIDTDGDGFISFD 66
Query: 61 EFLK 64
EF
Sbjct: 67 EFTD 70
Score = 24.1 bits (53), Expect = 3.2
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 36 DSAEERA--KNIFAKMDENNDGQLTQDEFLK-----GCLQDEELSKMLA 77
D+ ++ A + IF + D N DG+++ E G + +E+ +M+A
Sbjct: 5 DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMA 53
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding
protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A
2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A
1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Length = 108
Score = 31.4 bits (72), Expect = 0.009
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 8/64 (12%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D D +G I+ E+ +Q A + + K A D++ DG + D
Sbjct: 49 VIDQDKSGFIEEDELKLFLQNFSPSARALT--------DAETKAFLADGDKDGDGMIGVD 100
Query: 61 EFLK 64
EF
Sbjct: 101 EFAA 104
Score = 23.7 bits (52), Expect = 5.7
Identities = 17/87 (19%), Positives = 27/87 (31%), Gaps = 24/87 (27%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ +E V + S ++ K F +D++ G + +D
Sbjct: 15 LAACSAADSFKHKEFFAKV------------GLASKSLDD-VKKAFYVIDQDKSGFIEED 61
Query: 61 EFLKGCLQ----------DEELSKMLA 77
E LK LQ D E LA
Sbjct: 62 E-LKLFLQNFSPSARALTDAETKAFLA 87
>3a8r_A Putative uncharacterized protein; EF-hand, membrane,
oxidoreductase, transmembrane, calcium BI protein; 2.40A
{Oryza sativa japonica group}
Length = 179
Score = 31.6 bits (71), Expect = 0.011
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M D + +G + +E + + I A ++ + A+E I ++D N G + +
Sbjct: 106 MVDKNADGRLTAEE---VKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEME 162
Query: 61 EFLKGCLQDEE 71
+ LQ
Sbjct: 163 DLEALLLQSPS 173
Score = 25.8 bits (56), Expect = 1.3
Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 11/71 (15%)
Query: 5 DGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEFLK 64
V+ E+ + + D + R + F +D+N DG+LT +E +
Sbjct: 74 IVKQVLTKDELKDFYEQLTD-----------QGFDNRLRTFFDMVDKNADGRLTAEEVKE 122
Query: 65 GCLQDEELSKM 75
+K+
Sbjct: 123 IIALSASANKL 133
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 30.6 bits (70), Expect = 0.011
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M D D +G I E+ ++ +G ++ E K++ D + G +
Sbjct: 31 MIDTDNSGTITFDELKDGLKR----VG-------SELMESEIKDLMDAADIDKSGTIDYG 79
Query: 61 EFL 63
EF+
Sbjct: 80 EFI 82
Score = 29.8 bits (68), Expect = 0.026
Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 23/81 (28%)
Query: 5 DGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERA--KNIFAKMDENNDGQLTQDEF 62
+G ID + + + + L S EE K +F +D +N G +T DE
Sbjct: 1 HSSGHIDDDD-----KHMAERL----------SEEEIGGLKELFKMIDTDNSGTITFDEL 45
Query: 63 LKG------CLQDEELSKMLA 77
G L + E+ ++
Sbjct: 46 KDGLKRVGSELMESEIKDLMD 66
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle,
cell division, mitosis, MR transport, nuclear pore
complex, nucleus, phosphoprotein; 2.50A {Saccharomyces
cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A
Length = 161
Score = 31.0 bits (71), Expect = 0.016
Identities = 12/64 (18%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D D G I I+ + ++ + + + L +E + + + D + DG++ ++
Sbjct: 104 LFDDDHTGKISIKNLRRVAKELGETLT-----------DEELRAMIEEFDLDGDGEINEN 152
Query: 61 EFLK 64
EF+
Sbjct: 153 EFIA 156
Score = 26.7 bits (60), Expect = 0.61
Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D++ +G +D E+ ++A LG + ++ + D + D
Sbjct: 31 LFDMNNDGFLDYHELKVAMKA----LGFELP-------KREILDLIDEYDSEGRHLMKYD 79
Query: 61 EFL 63
+F
Sbjct: 80 DFY 82
Score = 26.7 bits (60), Expect = 0.63
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 24/85 (28%)
Query: 2 YDVDGNGVIDIQE----MTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQL 57
YD +G ++ + M + + + K F D+++ G++
Sbjct: 68 YDSEGRHLMKYDDFYIVMGEKIL--------------KRDPLDEIKRAFQLFDDDHTGKI 113
Query: 58 TQDEFLKGC------LQDEELSKML 76
+ + L DEEL M+
Sbjct: 114 SIKNLRRVAKELGETLTDEELRAMI 138
Score = 23.3 bits (51), Expect = 9.1
Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 10/50 (20%)
Query: 37 SAEERA--KNIFAKMDENNDGQLTQDEFLKGCLQ-------DEELSKMLA 77
E++ F+ D NNDG L E LK ++ E+ ++
Sbjct: 18 LEEQKQEIYEAFSLFDMNNDGFLDYHE-LKVAMKALGFELPKREILDLID 66
>2joj_A Centrin protein; N-terminal domain, centrin solution structure,
EF-hand calcium binding protein, cell cycle; NMR
{Euplotes octocarinatus}
Length = 77
Score = 30.2 bits (69), Expect = 0.016
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + G ID E+ ++A LG + + + D +G + D
Sbjct: 15 LFDTNKTGSIDYHELKVAMRA----LGFDVK-------KPEILELMNEYDREGNGYIGFD 63
Query: 61 EFLK 64
+FL
Sbjct: 64 DFLD 67
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation,
calcium, metal binding protein; 1.95A {Gallus gallus}
PDB: 2kqy_A
Length = 109
Score = 30.7 bits (70), Expect = 0.016
Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 8/64 (12%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D D +G I+ +E+ ++ + K A D + DG++ +
Sbjct: 50 ILDQDKSGFIEEEELQLFLKNFSSSARVLT--------SAETKAFLAAGDTDGDGKIGVE 101
Query: 61 EFLK 64
EF
Sbjct: 102 EFQS 105
Score = 23.8 bits (52), Expect = 6.5
Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 11/49 (22%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFLKGCLQ----------DEELSKMLA 77
++ K +F +D++ G + ++E L+ L+ E LA
Sbjct: 41 PDQIKKVFGILDQDKSGFIEEEE-LQLFLKNFSSSARVLTSAETKAFLA 88
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand
calcium-binding protein; 1.75A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A
1npq_A 1trf_A
Length = 90
Score = 30.3 bits (69), Expect = 0.018
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I +E+ +++ LG + +E I ++DE+ G + +
Sbjct: 28 MFDADGGGDISTKELGTVMRM----LGQNPT-------KEELDAIIEEVDEDGSGTIDFE 76
Query: 61 EFLK 64
EFL
Sbjct: 77 EFLV 80
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium,
RAS signal transduction, endocytosis/exocytosis
complex; NMR {Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 30.5 bits (69), Expect = 0.018
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 37 SAEERAK--NIFAKMDENNDGQLTQDE----FLKGCLQDEELSKM 75
+ E+R N F + + +G + F K L ELS +
Sbjct: 4 TDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHI 48
Score = 29.7 bits (67), Expect = 0.032
Identities = 17/84 (20%), Positives = 22/84 (26%), Gaps = 19/84 (22%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D NG I + S P I+ D + DG LT D
Sbjct: 17 TIQPDLNGFIPGSAAKEFFT---------KSKLPILELSH----IWELSDFDKDGALTLD 63
Query: 61 EFLKG------CLQDEELSKMLAP 78
EF +L + L
Sbjct: 64 EFCAAFHLVVARKNGYDLPEKLPE 87
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide
compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB:
3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Length = 143
Score = 30.9 bits (71), Expect = 0.019
Identities = 12/64 (18%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D D G I + + ++ + + + L +E + + + D + DG++++
Sbjct: 87 LFDDDETGKISFKNLKRVAKELGENLT-----------DEELQEMIDEADRDGDGEVSEQ 135
Query: 61 EFLK 64
EFL+
Sbjct: 136 EFLR 139
Score = 28.2 bits (64), Expect = 0.14
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG G ID++E+ ++A LG +E K + +++D+ G++
Sbjct: 14 LFDADGTGTIDVKELKVAMRA----LGFEPK-------KEEIKKMISEIDKEGTGKMNFG 62
Query: 61 EFLK 64
+FL
Sbjct: 63 DFLT 66
Score = 25.1 bits (56), Expect = 2.4
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 24/85 (28%)
Query: 2 YDVDGNGVIDIQE----MTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQL 57
D +G G ++ + MT+ + +E F D++ G++
Sbjct: 51 IDKEGTGKMNFGDFLTVMTQKMS--------------EKDTKEEILKAFKLFDDDETGKI 96
Query: 58 TQDEF------LKGCLQDEELSKML 76
+ L L DEEL +M+
Sbjct: 97 SFKNLKRVAKELGENLTDEELQEMI 121
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein;
1.90A {Homo sapiens}
Length = 107
Score = 30.4 bits (69), Expect = 0.019
Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D++GNG IDI + ++++ LG + K + ++ + +
Sbjct: 40 EFDLNGNGDIDIMSLKRMLEK----LGVPKT-------HLELKKLIGEVSSGSGETFSYP 88
Query: 61 EFLK 64
+FL+
Sbjct: 89 DFLR 92
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A
1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A
2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Length = 162
Score = 31.0 bits (71), Expect = 0.020
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + +G IDI+E+ +I++A + + EE +++ D+NNDG++ D
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHVT-----------EEDIEDLMKDSDKNNDGRIDFD 152
Query: 61 EFLK 64
EFLK
Sbjct: 153 EFLK 156
Score = 27.5 bits (62), Expect = 0.34
Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 13/81 (16%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
D DG+G ID +E M+ +EE N F D+N DG + +E
Sbjct: 65 VDEDGSGTIDFEEF-------LVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEE 117
Query: 62 FLKGC------LQDEELSKML 76
+ + +E++ ++
Sbjct: 118 LGEILRATGEHVTEEDIEDLM 138
Score = 26.4 bits (59), Expect = 0.68
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I +E+ +++ LG + +E I ++DE+ G + +
Sbjct: 28 MFDADGGGDISTKELGTVMRM----LGQNPT-------KEELDAIIEEVDEDGSGTIDFE 76
Query: 61 EFL 63
EFL
Sbjct: 77 EFL 79
Score = 23.7 bits (52), Expect = 6.6
Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 10/50 (20%)
Query: 37 SAEERA--KNIFAKMDENNDGQLTQDEFLKGCLQ-------DEELSKMLA 77
S E A K F D + G ++ E L ++ EEL ++
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKE-LGTVMRMLGQNPTKEELDAIIE 63
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of
cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB:
1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S
3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Length = 173
Score = 30.9 bits (70), Expect = 0.020
Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 12/74 (16%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+DVD +G I E+ +A L E ++ + + G + D
Sbjct: 85 QFDVDRSGTIGSSELPGAFEAAGFHL------------NEHLYSMIIRRYSDEGGNMDFD 132
Query: 61 EFLKGCLQDEELSK 74
F+ ++ + + +
Sbjct: 133 NFISCLVRLDAMFR 146
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal
binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Length = 158
Score = 30.6 bits (70), Expect = 0.025
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+YD +GNG I M +I+ + + L E + ++D + G + +
Sbjct: 99 LYDKEGNGYISTDVMREILAELDETLS-----------SEDLDAMIDEIDADGSGTVDFE 147
Query: 61 EFLK 64
EF+
Sbjct: 148 EFMG 151
Score = 27.5 bits (62), Expect = 0.30
Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 12/81 (14%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+D GNG ID I + ++ + F D+ +G ++ D
Sbjct: 59 FDPFGNGDIDFDSFKII------GARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDV 112
Query: 62 F------LKGCLQDEELSKML 76
L L E+L M+
Sbjct: 113 MREILAELDETLSSEDLDAMI 133
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Length = 94
Score = 29.9 bits (68), Expect = 0.025
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D DGNG I E+ ++ + + L +E + + D + DGQ+ +
Sbjct: 37 VEDKDGNGYISAAELRHVMTNLGEKLT-----------DEEVDEMIREADIDGDGQVNYE 85
Query: 61 EFLK 64
EF++
Sbjct: 86 EFVQ 89
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain,
POB1 EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 30.1 bits (68), Expect = 0.025
Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 6/45 (13%)
Query: 37 SAEERAK--NIFAKMDENNDGQLTQDE----FLKGCLQDEELSKM 75
+ E+R N F + + ++ F K L ELS +
Sbjct: 17 TEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYI 61
Score = 27.4 bits (61), Expect = 0.29
Identities = 14/83 (16%), Positives = 18/83 (21%), Gaps = 19/83 (22%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
D + I S I+ D + DG LT E
Sbjct: 31 LQPDPSSFISGSVAKNFFT---------KSKLSIPELSY----IWELSDADCDGALTLPE 77
Query: 62 FLKG------CLQDEELSKMLAP 78
F L + L P
Sbjct: 78 FCAAFHLIVARKNGYPLPEGLPP 100
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata}
SCOP: a.39.1.4
Length = 109
Score = 30.2 bits (69), Expect = 0.027
Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D D +G I+ +E+ +++ + + K + A D ++DG++ D
Sbjct: 49 ILDKDQSGFIEEEELKGVLKGFSAHGRDLN--------DTETKALLAAGDSDHDGKIGAD 100
Query: 61 EFLK 64
EF K
Sbjct: 101 EFAK 104
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin;
EF-hands, calcium, metal binding protein; 2.17A {Bos
taurus} PDB: 2f2p_A
Length = 179
Score = 30.6 bits (70), Expect = 0.029
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DGNG I E+ ++ + + L +E + + D + DGQ+ +
Sbjct: 92 VFDKDGNGYISAAELRHVMTNLGEKLT-----------DEEVDEMIREADIDGDGQVNYE 140
Query: 61 EFLK 64
EF++
Sbjct: 141 EFVQ 144
Score = 26.3 bits (59), Expect = 0.81
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG+G I +E+ ++++ LG + E +++ ++D + +G +
Sbjct: 19 LFDKDGDGTITTKELGTVMRS----LGQNPT-------EAELQDMINEVDADGNGTIDFP 67
Query: 61 EFL 63
EFL
Sbjct: 68 EFL 70
Score = 24.4 bits (54), Expect = 3.6
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 20/83 (24%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEE--RAKNIFAKMDENNDGQLTQ 59
D DGNG ID E ++ + DS EE A +F D++ +G ++
Sbjct: 56 VDADGNGTIDFPEFLTMMARKM---------KDTDSEEEIREAFRVF---DKDGNGYISA 103
Query: 60 DEFLKGC------LQDEELSKML 76
E L DEE+ +M+
Sbjct: 104 AELRHVMTNLGEKLTDEEVDEMI 126
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding,
ME binding protein-toxin complex; 2.20A {Chlamydomonas
reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Length = 169
Score = 30.2 bits (69), Expect = 0.029
Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D D +G I I+++ ++ + + + L EE + + A+ D N+D ++ +D
Sbjct: 109 LFDDDNSGTITIKDLRRVAKELGENLT-----------EEELQEMIAEADRNDDNEIDED 157
Query: 61 EFLK 64
EF++
Sbjct: 158 EFIR 161
Score = 27.2 bits (61), Expect = 0.36
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG+G ID +E+ ++A LG +E K + +++D++ G + +
Sbjct: 36 LFDTDGSGTIDAKELKVAMRA----LGFEPK-------KEEIKKMISEIDKDGSGTIDFE 84
Query: 61 EFL 63
EFL
Sbjct: 85 EFL 87
Score = 25.6 bits (57), Expect = 1.4
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 24/85 (28%)
Query: 2 YDVDGNGVIDIQE----MTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQL 57
D DG+G ID +E MT + + E F D++N G +
Sbjct: 73 IDKDGSGTIDFEEFLTMMTAKMG--------------ERDSREEILKAFRLFDDDNSGTI 118
Query: 58 TQDEFLKGC------LQDEELSKML 76
T + + L +EEL +M+
Sbjct: 119 TIKDLRRVAKELGENLTEEELQEMI 143
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal
binding Pro; NMR {Glycine max}
Length = 92
Score = 29.5 bits (67), Expect = 0.032
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D D NG I E+ ++ + + L +E + + + D + DGQ+ +
Sbjct: 17 VFDKDQNGYISASELRHVMINLGEKLT-----------DEEVEQMIKEADLDGDGQVNYE 65
Query: 61 EFLK 64
EF+K
Sbjct: 66 EFVK 69
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially
structured protein, CAM-like; NMR {Entamoeba
histolytica} PDB: 2lc5_A
Length = 85
Score = 29.5 bits (67), Expect = 0.035
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D D + + +E+ +++A LGA + +++ I D++N G+ Q+
Sbjct: 22 LFDKDNDNKLTAEELGTVMRA----LGANPT-------KQKISEIVKDYDKDNSGKFDQE 70
Query: 61 EFLK 64
FL
Sbjct: 71 TFLT 74
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1;
calmodulin-like domain, EF calcium binding protein,
transferase; 2.00A {Arabidopsis thaliana}
Length = 166
Score = 30.2 bits (69), Expect = 0.036
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Query: 37 SAEERA--KNIFAKMDENNDGQLTQDEFLKG------CLQDEELSKMLA 77
S EE A K +F +D + GQ+T +E G L++ E+ ++
Sbjct: 22 SEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQ 70
Score = 29.8 bits (68), Expect = 0.042
Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D DG+G I E+ + + + R + + +D++NDG++ +
Sbjct: 107 YFDKDGSGYITPDELQQACEEF-------------GVEDVRIEELMRDVDQDNDGRIDYN 153
Query: 61 EFLK 64
EF+
Sbjct: 154 EFVA 157
Score = 29.8 bits (68), Expect = 0.052
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 15/80 (18%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
DVD +G ID +E + A + E+ F D++ G +T DE
Sbjct: 72 ADVDNSGTIDYKEF----------IAATLHLNKIER-EDHLFAAFTYFDKDGSGYITPDE 120
Query: 62 FLKGC----LQDEELSKMLA 77
+ C ++D + +++
Sbjct: 121 LQQACEEFGVEDVRIEELMR 140
Score = 29.4 bits (67), Expect = 0.063
Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 17/80 (21%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M D D +G I +E+ ++ + A+ E ++ D +N G +
Sbjct: 35 MIDADKSGQITFEELKAGLKRV-----------GANLKESEILDLMQAADVDNSGTIDYK 83
Query: 61 EFL------KGCLQDEELSK 74
EF+ +++ L
Sbjct: 84 EFIAATLHLNKIEREDHLFA 103
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP;
2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A
2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A*
1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A*
3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Length = 161
Score = 30.2 bits (69), Expect = 0.036
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D + +G ID++E+ ++QA + + E+ + + D+NNDG++ D
Sbjct: 103 MFDKNADGYIDLEELKIMLQATGETIT-----------EDDIEELMKDGDKNNDGRIDYD 151
Query: 61 EFLK 64
EFL+
Sbjct: 152 EFLE 155
Score = 27.5 bits (62), Expect = 0.30
Identities = 15/81 (18%), Positives = 33/81 (40%), Gaps = 13/81 (16%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
D DG+G +D E M+ + +EE ++F D+N DG + +E
Sbjct: 64 VDEDGSGTVDFDEF-------LVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 62 FLKGC------LQDEELSKML 76
+ ++++ +++
Sbjct: 117 LKIMLQATGETITEDDIEELM 137
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A
{Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A
1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D*
2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A
1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Length = 148
Score = 29.8 bits (68), Expect = 0.050
Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DGNG+I E+ ++ + + L ++ + + D + DG + +
Sbjct: 91 VFDRDGNGLISAAELRHVMTNLGEKLT-----------DDEVDEMIREADIDGDGHINYE 139
Query: 61 EFLK 64
EF++
Sbjct: 140 EFVR 143
Score = 26.7 bits (60), Expect = 0.56
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D DG+G I +E+ ++++ LG + E +++ ++D + +G +
Sbjct: 18 LFDKDGDGTITTKELGTVMRS----LGQNPT-------EAELQDMINEVDADGNGTIDFP 66
Query: 61 EFL 63
EFL
Sbjct: 67 EFL 69
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Length = 81
Score = 29.1 bits (66), Expect = 0.050
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D +G+GVID E I+Q +G + + + DE+ +G +
Sbjct: 16 VFDANGDGVIDFDEFKFIMQK----VGEEPLT------DAEVEEAMKEADEDGNGVIDIP 65
Query: 61 EFLK 64
EF+
Sbjct: 66 EFMD 69
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain,
EF-SAM, STIM1, store operated calcium entry regulator,
SOCE; NMR {Homo sapiens}
Length = 150
Score = 29.6 bits (66), Expect = 0.052
Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 27 GACSSNRPADSAEERA-KNIFAKMDENNDGQLTQDE---FLKGCLQDEELSKM 75
G+ ++ + A +NI MD++ +G + +E FL+ L + +
Sbjct: 1 GSHMASSEDEKLSFEAVRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPTVK 53
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin
crosslinking, ionized calciu binding adapter molecule 2,
metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B
2vtg_A
Length = 150
Score = 29.4 bits (66), Expect = 0.055
Identities = 8/64 (12%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D++ G ID+ + ++++ LG + K + +++ ++
Sbjct: 58 EFDLNNEGEIDLMSLKRMMEK----LGVPKT-------HLEMKKMISEVTGGVSDTISYR 106
Query: 61 EFLK 64
+F+
Sbjct: 107 DFVN 110
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein,
solution structure, backbone dynamic, structural
genomics; NMR {Homo sapiens}
Length = 71
Score = 28.6 bits (65), Expect = 0.056
Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D DG+G I + E+ + + + L +E + + D + DG++ +
Sbjct: 14 AFDQDGDGHITVDELRRAMAGLGQPLP-----------QEELDAMIREADVDQDGRVNYE 62
Query: 61 EFLK 64
EF +
Sbjct: 63 EFAR 66
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 29.5 bits (67), Expect = 0.059
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 13/64 (20%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D DG+G I + E+ + + + ++ ++D++NDGQ+
Sbjct: 90 YFDKDGSGYITLDEIQQACKDF-------------GLDDIHIDDMIKEIDQDNDGQIDYG 136
Query: 61 EFLK 64
EF
Sbjct: 137 EFAA 140
Score = 28.7 bits (65), Expect = 0.10
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 8/49 (16%)
Query: 37 SAEERA--KNIFAKMDENNDGQLTQDEFLKG------CLQDEELSKMLA 77
S EE K +F +D +N G +T DE G L + E+ ++
Sbjct: 5 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMD 53
Score = 28.0 bits (63), Expect = 0.21
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 15/79 (18%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
D+D +G ID E + A + EE + F+ D++ G +T DE
Sbjct: 55 ADIDKSGTIDYGEF---IAATVHLN--------KLEREENLVSAFSYFDKDGSGYITLDE 103
Query: 62 FLKGC----LQDEELSKML 76
+ C L D + M+
Sbjct: 104 IQQACKDFGLDDIHIDDMI 122
Score = 27.2 bits (61), Expect = 0.36
Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M D D +G I E+ ++ +G+ E K++ D + G +
Sbjct: 18 MIDTDNSGTITFDELKDGLKR----VGSELM-------ESEIKDLMDAADIDKSGTIDYG 66
Query: 61 EFL 63
EF+
Sbjct: 67 EFI 69
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B*
1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B*
1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Length = 166
Score = 29.5 bits (67), Expect = 0.060
Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D DG G I + +++ + EE KN++A + G +
Sbjct: 103 VLDPDGKGSIKKSFLEELLTTGGGRF----------TPEE-IKNMWAAFPPDVAGNVDYK 151
Query: 61 EFLK 64
Sbjct: 152 NICY 155
Score = 24.5 bits (54), Expect = 4.0
Identities = 10/63 (15%), Positives = 22/63 (34%), Gaps = 14/63 (22%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D + +G+ID ++ + + +G + E M + G +
Sbjct: 33 VIDQNADGIIDKDDL----RETFAAMGRL----NVKNEELD------AMIKEASGPINFT 78
Query: 61 EFL 63
FL
Sbjct: 79 VFL 81
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal
binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Length = 147
Score = 29.5 bits (66), Expect = 0.064
Identities = 12/64 (18%), Positives = 29/64 (45%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D++GNG IDI + ++++ LG + K + ++ ++ +
Sbjct: 56 EFDLNGNGDIDIMSLKRMLEK----LGVPKT-------HLELKRLIREVSSGSEETFSYS 104
Query: 61 EFLK 64
+FL+
Sbjct: 105 DFLR 108
Score = 23.7 bits (51), Expect = 8.0
Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 8/45 (17%)
Query: 40 ERAKNIFAKMDENNDGQLTQDEFLKGCLQ-------DEELSKMLA 77
E K + + D N +G + LK L+ EL +++
Sbjct: 48 EAFKVKYMEFDLNGNGDIDIMS-LKRMLEKLGVPKTHLELKRLIR 91
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15,
EPS15; EH domain, EF-hand, solution structure, S100
protein; NMR {Mus musculus} SCOP: a.39.1.6
Length = 99
Score = 29.0 bits (65), Expect = 0.073
Identities = 7/50 (14%), Positives = 16/50 (32%), Gaps = 6/50 (12%)
Query: 34 PADSAEERAK--NIFAKMDENNDGQLTQDE----FLKGCLQDEELSKMLA 77
+ + +++ N G++ + K L D L K+
Sbjct: 3 LTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWD 52
Score = 27.1 bits (60), Expect = 0.34
Identities = 11/83 (13%), Positives = 22/83 (26%), Gaps = 19/83 (22%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+ G + + ++ S P + I+ D + G L++ E
Sbjct: 20 VEAGNTGRVLALDAAAFLK---------KSGLPDLILGK----IWDLADTDGKGVLSKQE 66
Query: 62 FLKG------CLQDEELSKMLAP 78
F E+S
Sbjct: 67 FFVALRLVACAQNGLEVSLSSLS 89
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand,
EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB:
2jxc_A 1f8h_A 1ff1_A
Length = 106
Score = 29.0 bits (65), Expect = 0.075
Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 19/80 (23%)
Query: 5 DGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF-- 62
NG + ++ ++ +S P D ++ D ++DG L +DEF
Sbjct: 26 PVNGFLSGDKVKPVLL---------NSKLPVDILGR----VWELSDIDHDGMLDRDEFAV 72
Query: 63 ----LKGCLQDEELSKMLAP 78
+ L+ E + L P
Sbjct: 73 AMFLVYCALEKEPVPMSLPP 92
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 29.0 bits (66), Expect = 0.079
Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D + +G I + +++ + D + EE ++ + + G
Sbjct: 84 CFDEEASGFIHEDHLRELLTTMGDRF----------TDEE-VDEMYREAPIDKKGNFNYV 132
Query: 61 EFLK 64
EF +
Sbjct: 133 EFTR 136
Score = 23.6 bits (52), Expect = 6.8
Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 15/63 (23%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M D + +G ID +++ + +G + M G +
Sbjct: 15 MIDQNRDGFIDKEDL----HDMLASMGKNPT-----------DEYLEGMMSEAPGPINFT 59
Query: 61 EFL 63
FL
Sbjct: 60 MFL 62
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light
chain, cell cycle protein; 1.65A {Saccharomyces
cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A
2fce_A
Length = 148
Score = 28.7 bits (65), Expect = 0.097
Identities = 5/64 (7%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + G + + ++ ++ + + L + + ++ +++G++
Sbjct: 91 VFDKESTGKVSVGDLRYMLTGLGEKL-----------TDAEVDELLKGVEVDSNGEIDYK 139
Query: 61 EFLK 64
+F++
Sbjct: 140 KFIE 143
Score = 28.3 bits (64), Expect = 0.13
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 10/64 (15%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D G G I + ++A +G +N + I A + LT D
Sbjct: 12 LFDKKGQGAIAKDSLGDYLRA----IGYNPTN------QLVQDIINADSSLRDASSLTLD 61
Query: 61 EFLK 64
+
Sbjct: 62 QITG 65
Score = 25.2 bits (56), Expect = 1.6
Identities = 10/82 (12%), Positives = 29/82 (35%), Gaps = 11/82 (13%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+ + + ++T +++ + + E F D+ + G+++ +
Sbjct: 50 SSLRDASSLTLDQITGLIEVNEK-----ELDATTKAKTEDFVKAFQVFDKESTGKVSVGD 104
Query: 62 F------LKGCLQDEELSKMLA 77
L L D E+ ++L
Sbjct: 105 LRYMLTGLGEKLTDAEVDELLK 126
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo
sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Length = 153
Score = 29.0 bits (66), Expect = 0.098
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D +G+G I E+ + ++A +LG + I +D N DG++ +
Sbjct: 96 EFDTNGDGEISTSELREAMRA---LLGHQVG-------HRDIEEIIRDVDLNGDGRVDFE 145
Query: 61 EFLK 64
EF++
Sbjct: 146 EFVR 149
Score = 27.1 bits (61), Expect = 0.38
Identities = 10/82 (12%), Positives = 31/82 (37%), Gaps = 13/82 (15%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
+++ G +D + ++ M + + ++ F + D N DG+++ E
Sbjct: 56 INMNLGGHVDFDDFVEL------MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSE 109
Query: 62 -------FLKGCLQDEELSKML 76
L + ++ +++
Sbjct: 110 LREAMRALLGHQVGHRDIEEII 131
Score = 26.3 bits (59), Expect = 0.87
Identities = 10/63 (15%), Positives = 27/63 (42%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D D +G I+ +++ ++ +G + E + +++ N G + D
Sbjct: 19 EFDKDKDGYINCRDLGNCMRT----MGYMPT-------EMELIELSQQINMNLGGHVDFD 67
Query: 61 EFL 63
+F+
Sbjct: 68 DFV 70
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal
binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8
PDB: 1k95_A 1f4q_A 1f4o_A
Length = 165
Score = 28.9 bits (65), Expect = 0.12
Identities = 10/64 (15%), Positives = 19/64 (29%), Gaps = 17/64 (26%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M D D G + ++ A+ K F +D++ G +
Sbjct: 48 MLDRDHTGKMGFNAFKELWAALNAW-----------------KENFMTVDQDGSGTVEHH 90
Query: 61 EFLK 64
E +
Sbjct: 91 ELRQ 94
Score = 28.1 bits (63), Expect = 0.22
Identities = 11/74 (14%), Positives = 30/74 (40%), Gaps = 13/74 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D DG+G ++ E+ + + + L + I + + +G++ D
Sbjct: 78 TVDQDGSGTVEHHELRQAIGLMGYRLS-----------PQTLTTIVKRYSK--NGRIFFD 124
Query: 61 EFLKGCLQDEELSK 74
+++ C++ L+
Sbjct: 125 DYVACCVKLRALTD 138
Score = 23.9 bits (52), Expect = 5.8
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
+G +D +E+ Q G + P E + + A +D ++ G++ + F
Sbjct: 9 VAGQDGEVDAEEL----QRCLTQSGINGTYSPFS--LETCRIMIAMLDRDHTGKMGFNAF 62
Query: 63 LK 64
+
Sbjct: 63 KE 64
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein;
2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1
PDB: 1eg4_A
Length = 261
Score = 28.1 bits (62), Expect = 0.24
Identities = 13/107 (12%), Positives = 24/107 (22%), Gaps = 41/107 (38%)
Query: 1 MYDVDGNGVIDIQE--------------------------------------MTKIVQAI 22
+YD G I + + I
Sbjct: 140 VYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQI 199
Query: 23 YDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEFLKGCLQD 69
LG ++ + E ++ F NN ++ FL +
Sbjct: 200 PRQLG-EVASFGGSNIEPSVRSCFQFA--NNKPEIEAALFLDWMRLE 243
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2,
protein structure initiative, northeast structural
genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Length = 121
Score = 27.5 bits (61), Expect = 0.25
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFLKG------CLQDEELSKMLAP 78
+ I+A D NNDG++ Q EF LQ +L L P
Sbjct: 65 QPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSALPP 110
>1nub_A Basement membrane protein BM-40; extracellular module,
glycoprotein, anti-adhesive protein, C binding,
site-directed mutagenesis; HET: NAG; 2.80A {Homo
sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A*
1bmo_A*
Length = 229
Score = 28.0 bits (61), Expect = 0.26
Identities = 11/67 (16%), Positives = 21/67 (31%), Gaps = 14/67 (20%)
Query: 7 NGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEFLKGC 66
+G + E+ + + M E F D +ND + DE+ C
Sbjct: 170 DGYLSHTELAPLRAPLIPM-------------EHCTTRFFETCDLDNDKYIALDEWAG-C 215
Query: 67 LQDEELS 73
++
Sbjct: 216 FGIKQKD 222
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding,
phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Length = 167
Score = 27.7 bits (62), Expect = 0.26
Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 13/75 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D D +G +D QE+ K + +G + + +S I + G++T D
Sbjct: 80 SFDSDRSGTVDPQELQKALTT----MGFRLNPQTVNS-------IAKRYS--TSGKITFD 126
Query: 61 EFLKGCLQDEELSKM 75
+++ C++ L+
Sbjct: 127 DYIACCVKLRALTDS 141
Score = 27.3 bits (61), Expect = 0.40
Identities = 9/62 (14%), Positives = 17/62 (27%), Gaps = 17/62 (27%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M D D +G + E ++ + + F D + G +
Sbjct: 50 MLDRDMSGTMGFNEFKELWAVLNGW-----------------RQHFISFDSDRSGTVDPQ 92
Query: 61 EF 62
E
Sbjct: 93 EL 94
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal
transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB:
2jc2_A
Length = 198
Score = 27.8 bits (62), Expect = 0.27
Identities = 9/62 (14%), Positives = 17/62 (27%), Gaps = 17/62 (27%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M D D +G + E ++ + + F D + G +
Sbjct: 81 MLDRDMSGTMGFNEFKELWAVLNGW-----------------RQHFISFDTDRSGTVDPQ 123
Query: 61 EF 62
E
Sbjct: 124 EL 125
Score = 27.0 bits (60), Expect = 0.44
Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 13/74 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D D +G +D QE+ K + + L + + +I + +G++T D
Sbjct: 111 SFDTDRSGTVDPQELQKALTTMGFRL-----------SPQAVNSIAKRYS--TNGKITFD 157
Query: 61 EFLKGCLQDEELSK 74
+++ C++ L+
Sbjct: 158 DYIACCVKLRALTD 171
Score = 26.3 bits (58), Expect = 0.94
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
+G ID E+ Q G +P + E + + + +D + G + +EF
Sbjct: 42 VAGQDGQIDADEL----QRCLTQSGIAGGYKPFN--LETCRLMVSMLDRDMSGTMGFNEF 95
Query: 63 LK 64
+
Sbjct: 96 KE 97
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II,
calcium/phospholipid binding protein,
calcium-phospholipid protein complex; 2.25A {Homo
sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Length = 96
Score = 27.1 bits (60), Expect = 0.29
Identities = 5/25 (20%), Positives = 9/25 (36%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
I +D+ DG++ F
Sbjct: 48 PLAVDKIMKDLDQCRDGKVGFQSFF 72
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100
protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2
PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Length = 100
Score = 27.1 bits (60), Expect = 0.33
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 43 KNIFAKMDENNDGQLTQDEFL 63
++F K D+N D ++ EFL
Sbjct: 55 ADVFEKKDKNEDKKIDFSEFL 75
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein;
2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A
2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Length = 106
Score = 27.1 bits (60), Expect = 0.41
Identities = 5/25 (20%), Positives = 9/25 (36%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
+D N D +L +E+
Sbjct: 61 VGSLDEKMKSLDVNQDSELKFNEYW 85
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP:
a.39.1.1
Length = 78
Score = 26.5 bits (59), Expect = 0.45
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
++F ++D+N DG+++ +EF
Sbjct: 46 PRTLDDLFQELDKNGDGEVSFEEFQ 70
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo
sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Length = 139
Score = 27.2 bits (60), Expect = 0.46
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 6/35 (17%)
Query: 50 DENNDGQLTQDEF------LKGCLQDEELSKMLAP 78
D + DG L +EF +K L+ EL L P
Sbjct: 94 DVDKDGLLDDEEFALANHLIKVKLEGHELPADLPP 128
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle,
myosin subfragment 2, heavy meromyosin, essential light
chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 26.9 bits (60), Expect = 0.49
Identities = 7/64 (10%), Positives = 24/64 (37%), Gaps = 12/64 (18%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D +G+G + + + + + S +E ++ + +G +
Sbjct: 134 LFD-EGDGKCKEETLKRSLTTWGEKF----------SQDE-VDQALSEAPIDGNGLIDIK 181
Query: 61 EFLK 64
+F +
Sbjct: 182 KFAQ 185
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 27.1 bits (59), Expect = 0.49
Identities = 6/37 (16%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 41 RAKNIFAKMDENNDGQLTQDEFLKGCLQDEELSKMLA 77
R K + + ++ D L +E+ +L
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMT-LTPDEVKSLLL 308
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural
genomics, PSI-B protein structure initiative, NEW YORK
structural genomics consortium; 1.54A {Homo sapiens}
PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Length = 93
Score = 26.3 bits (58), Expect = 0.52
Identities = 5/25 (20%), Positives = 12/25 (48%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
E + + + +D N D ++ E+
Sbjct: 52 EAAFQKLMSNLDSNRDNEVDFQEYC 76
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE
calcium entry, signaling protein; NMR {Homo sapiens}
Length = 150
Score = 26.9 bits (59), Expect = 0.55
Identities = 10/53 (18%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 27 GACSSNRPADSAEERA-KNIFAKMDENNDGQLTQDE---FLKGCLQDEELSKM 75
G+ ++ D A + I +MD++ DG + +E F++ ++ ++ +
Sbjct: 1 GSHMASTEEDRFSLEALQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNK 53
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+)
requirement, hydrolase chimera; 2.80A {Rattus
norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Length = 900
Score = 27.0 bits (59), Expect = 0.60
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 17/62 (27%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D DGNG + + E + I + IF K D + G ++
Sbjct: 585 LMDRDGNGKLGLVEFNILWNRIRNY-----------------LTIFRKFDLDKSGSMSAY 627
Query: 61 EF 62
E
Sbjct: 628 EM 629
Score = 25.9 bits (56), Expect = 1.4
Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 28/88 (31%)
Query: 1 MYDVDGNGVIDIQEMTKIVQA--------IYDMLGACSSNRPADSAE------------- 39
++ D +G I E+ +A IY M+ R +D
Sbjct: 812 RFETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIR----RYSDETGNMDFDNFISCLVR 867
Query: 40 -ERAKNIFAKMDENNDG--QLTQDEFLK 64
+ F +D+N G Q+ E+L+
Sbjct: 868 LDAMFRAFRSLDKNGTGQIQVNIQEWLQ 895
Score = 24.3 bits (52), Expect = 5.1
Identities = 9/69 (13%), Positives = 25/69 (36%), Gaps = 18/69 (26%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ D D G + +E + +++ + + I+ + + + G + +
Sbjct: 782 VMDSDTTGKLGFEE----FKYLWNNIKKW-------------QGIYKRFETDRSGTIGSN 824
Query: 61 EFLKGCLQD 69
E L G +
Sbjct: 825 E-LPGAFEA 832
Score = 24.0 bits (51), Expect = 7.8
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 1 MYDVDGNGVIDIQEMTKIVQ 20
+D+D +G + EM ++
Sbjct: 615 KFDLDKSGSMSAYEMRMAIE 634
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin
V, chicken, molecular motor, ATPase, ELC, IQ motif,
muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens}
SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B*
1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Length = 151
Score = 26.8 bits (60), Expect = 0.61
Identities = 12/64 (18%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D +GNG + E+ ++ + + + + EE + E+++G + +
Sbjct: 95 VFDKEGNGKVMGAELRHVLTTLGEKM----------TEEEVETVLAG--HEDSNGCINYE 142
Query: 61 EFLK 64
FLK
Sbjct: 143 AFLK 146
Score = 26.0 bits (58), Expect = 1.2
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
D + +D + ML A + NR + E+ F D+ +G++ E
Sbjct: 57 SDELKSRRVDFET-------FLPMLQAVAKNRGQGTYED-YLEGFRVFDKEGNGKVMGAE 108
Query: 62 F------LKGCLQDEELSKMLA 77
L + +EE+ +LA
Sbjct: 109 LRHVLTTLGEKMTEEEVETVLA 130
Score = 23.7 bits (52), Expect = 6.1
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D G+G I + +++A LG +N AE K DE ++ +
Sbjct: 18 LFDRVGDGKILYSQCGDVMRA----LGQNPTN-----AEVLKVLGNPKSDELKSRRVDFE 68
Query: 61 EFL 63
FL
Sbjct: 69 TFL 71
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme
delta1; phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 26.8 bits (58), Expect = 0.65
Identities = 5/24 (20%), Positives = 9/24 (37%)
Query: 43 KNIFAKMDENNDGQLTQDEFLKGC 66
+ K D+N D ++ E
Sbjct: 14 HSCLRKADKNKDNKMNFKELKDFL 37
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response,
metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A*
2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Length = 95
Score = 26.3 bits (58), Expect = 0.66
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
+ IF +D N D Q+ EF+
Sbjct: 54 KAVIDEIFQGLDANQDEQVDFQEFI 78
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding
protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2
PDB: 1mr8_A
Length = 93
Score = 26.3 bits (58), Expect = 0.70
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 34 PADSAEERAKNIFAKMDENNDGQLTQDEFL 63
P ++ A F ++D N DG + EFL
Sbjct: 43 PQYIRKKGADVWFKELDINTDGAVNFQEFL 72
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A
{Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A
Length = 147
Score = 26.3 bits (59), Expect = 0.76
Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D D +G I E+ ++++ LG S E ++ ++D + + +
Sbjct: 19 LFDKDNSGSISASELATVMRS----LGLSPS-------EAEVADLMNEIDVDGNHAIEFS 67
Query: 61 EFL 63
EFL
Sbjct: 68 EFL 70
Score = 24.7 bits (55), Expect = 2.5
Identities = 9/64 (14%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D +G+G+I E+ ++ +I + L + + ++ + G++
Sbjct: 92 VFDKNGDGLISAAELKHVLTSIGEKLT-----------DAEVDEMLREVS-DGSGEINIK 139
Query: 61 EFLK 64
+F
Sbjct: 140 QFAA 143
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell
membrane, hydrolase, MEMB protease, thiol protease,
phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A
1df0_A 1u5i_A 1kfu_L 1kfx_L
Length = 714
Score = 26.7 bits (58), Expect = 0.77
Identities = 20/84 (23%), Positives = 29/84 (34%), Gaps = 20/84 (23%)
Query: 1 MYDVDGNGVIDIQEMTKIVQA----IYDMLGACSSNRPADSAE--------------ERA 42
DVD +G ++ EM K ++ + L R AD E
Sbjct: 613 EIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEIL 672
Query: 43 KNIFAKMDENNDG--QLTQDEFLK 64
IF ++D N G QL +L
Sbjct: 673 FKIFKQLDPENTGTIQLDLISWLS 696
Score = 25.9 bits (56), Expect = 1.3
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 17/62 (27%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M D DG+G + ++E + I + I+ ++D + G +
Sbjct: 583 MLDEDGSGKLGLKEFYILWTKIQKY-----------------QKIYREIDVDRSGTMNSY 625
Query: 61 EF 62
E
Sbjct: 626 EM 627
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding
protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2
PDB: 1irj_A*
Length = 113
Score = 26.0 bits (57), Expect = 0.84
Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 5 DGN-GVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEFL 63
G+ ++ E ++V+ L + E+ ++I +D N D QL+ +EF+
Sbjct: 25 LGHPDTLNQGEFKELVR---KDLQNFLKKENKN--EKVIEHIMEDLDTNADKQLSFEEFI 79
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 142
Score = 26.3 bits (59), Expect = 0.90
Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 11/63 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D + G I + + Q + G +F + D +G++
Sbjct: 14 LFDSERTGFITKEGL----QTVLKQFGVRVE-------PAAFNEMFNEADATGNGKIQFP 62
Query: 61 EFL 63
EFL
Sbjct: 63 EFL 65
Score = 24.0 bits (53), Expect = 6.2
Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 24/86 (27%)
Query: 2 YDVDGNGVIDIQE----MTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQL 57
D GNG I E M + ++ ++E+ + F D G +
Sbjct: 51 ADATGNGKIQFPEFLSMMGRRMKQ--------------TTSEDILRQAFRTFDPEGTGYI 96
Query: 58 TQDEFLKGC------LQDEELSKMLA 77
+ L+ E ++ L
Sbjct: 97 PKAALQDALLNLGDRLKPHEFAEFLG 122
Score = 23.6 bits (52), Expect = 8.6
Identities = 10/64 (15%), Positives = 18/64 (28%), Gaps = 12/64 (18%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+D +G G I + + + D L + GQ+ D
Sbjct: 87 TFDPEGTGYIPKAALQDALLNLGDRLK-----------PHEFAEFLGITE-TEKGQIRYD 134
Query: 61 EFLK 64
F+
Sbjct: 135 NFIN 138
Score = 23.2 bits (51), Expect = 8.6
Identities = 8/42 (19%), Positives = 15/42 (35%), Gaps = 8/42 (19%)
Query: 43 KNIFAKMDENNDGQLTQDEFLKGCLQ-------DEELSKMLA 77
K F D G +T++ L+ L+ ++M
Sbjct: 9 KEAFELFDSERTGFITKEG-LQTVLKQFGVRVEPAAFNEMFN 49
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal
binding protein, binding protein; NMR {Homo sapiens}
PDB: 3c1v_A
Length = 113
Score = 26.0 bits (57), Expect = 0.93
Identities = 4/21 (19%), Positives = 11/21 (52%)
Query: 43 KNIFAKMDENNDGQLTQDEFL 63
+ + + +D N D ++ E+
Sbjct: 68 QKLMSNLDSNRDNEVDFQEYC 88
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 145
Score = 26.0 bits (58), Expect = 0.95
Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D +GNG I E+ +++ + D L ++ E + + ++ + DG + +
Sbjct: 84 ALDKEGNGTIQEAELRQLLLNLGDAL----------TSSE-VEELMKEVSVSGDGAINYE 132
Query: 61 EFLK 64
F+
Sbjct: 133 SFVD 136
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR
{Schizosaccharomyces pombe} SCOP: a.39.1.5
Length = 140
Score = 25.9 bits (58), Expect = 0.99
Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 14/81 (17%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEF 62
+ +D+++ +L + EE F D++ G + E
Sbjct: 47 ESTLPAEVDMEQ-------FLQVLNRPNGFDMPGDPEEF-VKGFQVFDKDATGMIGVGEL 98
Query: 63 ---LKGC---LQDEELSKMLA 77
L L +EE+ ++L
Sbjct: 99 RYVLTSLGEKLSNEEMDELLK 119
Score = 25.2 bits (56), Expect = 1.9
Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 15/64 (23%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D G G I + +++A G + AE +++ ++ +
Sbjct: 13 LFDRHGTGRIPKTSIGDLLRA----CGQNPTL-----AE------ITEIESTLPAEVDME 57
Query: 61 EFLK 64
+FL+
Sbjct: 58 QFLQ 61
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO,
EF-hand calcium binding proteins, S100 proteins,
protein dynamics, binding protein; 2.10A {Homo sapiens}
PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Length = 100
Score = 25.5 bits (56), Expect = 1.1
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
+ A + +D N+DG+++ DE+
Sbjct: 54 RKAADKLIQNLDANHDGRISFDEYW 78
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein,
regulation, complex, calcium, EF- hand, calmodulin,
ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis
thaliana}
Length = 135
Score = 25.8 bits (57), Expect = 1.1
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 10/64 (15%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ +I + + + LG ++E A+ + + D + DG L Q
Sbjct: 48 LLADPERHLITAESLRRNSGI----LG------IEGMSKEDAQGMVREGDLDGDGALNQT 97
Query: 61 EFLK 64
EF
Sbjct: 98 EFCV 101
Score = 24.6 bits (54), Expect = 2.8
Identities = 6/82 (7%), Positives = 19/82 (23%), Gaps = 17/82 (20%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
++ ML + + F+ + + +T +
Sbjct: 12 TTSTTKMETKYED----------MLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAES 61
Query: 62 FLKGC-------LQDEELSKML 76
+ + E+ M+
Sbjct: 62 LRRNSGILGIEGMSKEDAQGMV 83
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer,
X-type four-helix bundle, metal binding protein; NMR
{Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A
2kbm_A 2l0p_A 2jpt_A
Length = 93
Score = 25.5 bits (56), Expect = 1.2
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
+ I ++DEN DG++ EF+
Sbjct: 51 ADAVDKIMKELDENGDGEVDFQEFV 75
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding
protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A
1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X*
3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A*
3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Length = 92
Score = 25.5 bits (56), Expect = 1.2
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
+E + +D N DG+ EF+
Sbjct: 51 QEVVDKVMETLDSNGDGECDFQEFM 75
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion,
structural genomics, PSI, protein structur initiative,
structural genomics of pathogenic protozoa CONS SGPP;
1.70A {Plasmodium falciparum} PDB: 2auc_A
Length = 146
Score = 25.6 bits (57), Expect = 1.6
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 15/64 (23%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
+ G I I + + LG S+ +E+ K+ E LT +
Sbjct: 23 FNEKSSGGKISIDNASYNARK----LGLAPSS-----IDEK------KIKELYGDNLTYE 67
Query: 61 EFLK 64
++L+
Sbjct: 68 QYLE 71
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1ozo_A
Length = 95
Score = 25.2 bits (55), Expect = 1.6
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
++ + +D N D Q+ EF+
Sbjct: 51 KDAVDKLLKDLDANGDAQVDFSEFI 75
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein,
EF-hand, calcium regulation, oligomer neuronal
development, spine2; 2.03A {Danio rerio}
Length = 99
Score = 25.2 bits (55), Expect = 1.7
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
+ I +D N D ++ +EF+
Sbjct: 52 PMLVEKIMNDLDSNKDNEVDFNEFV 76
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 25.8 bits (56), Expect = 1.8
Identities = 11/81 (13%), Positives = 27/81 (33%), Gaps = 32/81 (39%)
Query: 8 GVIDIQEMTKIV-----------------QAIYDMLGACSSNRPA-----DSAEERAKNI 45
V+ I+ + ++V ++ Y M+ A + R A ++ + + +
Sbjct: 1775 DVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMI-AINPGRVAASFSQEALQYVVERV 1833
Query: 46 FAKMDE-------NNDGQLTQ 59
+ N + Q Q
Sbjct: 1834 GKRTGWLVEIVNYNVENQ--Q 1852
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium,
polymorphism, structural genomics, spine2, structural
proteomics in europe, spine; NMR {Homo sapiens} PDB:
2kay_A
Length = 92
Score = 25.1 bits (55), Expect = 1.8
Identities = 5/25 (20%), Positives = 13/25 (52%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
E ++ +D+N+D ++ E+
Sbjct: 49 ESSIDDLMKSLDKNSDQEIDFKEYS 73
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y
1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y
3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y
2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Length = 156
Score = 25.2 bits (56), Expect = 1.9
Identities = 7/64 (10%), Positives = 22/64 (34%), Gaps = 12/64 (18%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D ++I+ + +++ + D ++ + F + G+
Sbjct: 95 MFDEQETKKLNIEYIKDLLENMGDNFN-----------KDEMRMTFKEAPV-EGGKFDYV 142
Query: 61 EFLK 64
+F
Sbjct: 143 KFTA 146
Score = 23.2 bits (51), Expect = 9.4
Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 8/42 (19%)
Query: 43 KNIFAKMDENNDGQLTQDEFLKGCLQ-------DEELSKMLA 77
K F+ +D + DG +++++ +K + D+EL+ ML
Sbjct: 21 KEAFSMIDVDRDGFVSKED-IKAISEQLGRAPDDKELTAMLK 61
Score = 23.2 bits (51), Expect = 9.8
Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 28/104 (26%)
Query: 1 MYDVDGNGVIDIQEMTKIVQA---------IYDM-------------LGACSSNRPADSA 38
M DVD +G + +++ I + + M L S +
Sbjct: 26 MIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDS 85
Query: 39 EERAKNIFAKMDENNDGQLTQDEFLKGC------LQDEELSKML 76
EE +N FA DE +L + +E+
Sbjct: 86 EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTF 129
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A
{Homo sapiens} SCOP: a.39.1.3
Length = 151
Score = 25.2 bits (54), Expect = 1.9
Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 17/77 (22%)
Query: 3 DVDG-NGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
D +G + E+ + P E F D +ND + DE
Sbjct: 87 DQHPIDGYLSHTELAPL-------------RAPLIPMEHCTTRFFETCDLDNDKYIALDE 133
Query: 62 FLKGCLQ--DEELSKML 76
+ GC +++ K L
Sbjct: 134 W-AGCFGIKQKDIDKDL 149
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex,
membrane protein, endocytosis; HET: ANP; 3.10A {Mus
musculus}
Length = 550
Score = 25.5 bits (55), Expect = 2.1
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 50 DENNDGQLTQDEF 62
D + DG L +EF
Sbjct: 501 DVDRDGMLDDEEF 513
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100
proteins, EF-; 1.94A {Homo sapiens}
Length = 104
Score = 24.8 bits (54), Expect = 2.5
Identities = 4/21 (19%), Positives = 11/21 (52%)
Query: 43 KNIFAKMDENNDGQLTQDEFL 63
+ + + +D N D ++ E+
Sbjct: 59 QKLMSNLDSNRDNEVDFQEYC 79
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding
protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A
3nsl_A
Length = 101
Score = 24.4 bits (53), Expect = 3.0
Identities = 5/25 (20%), Positives = 11/25 (44%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
E + +D N D ++ E++
Sbjct: 52 ECDYNKFMSVLDTNKDCEVDFVEYV 76
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100
family, EF-hand protein, complex (ligand/annexin),
ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2
PDB: 1nsh_A
Length = 99
Score = 24.4 bits (53), Expect = 3.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
+ K+D ++DGQL EFL
Sbjct: 55 PGVLDRMMKKLDLDSDGQLDFQEFL 79
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor
supressor, CAL binding protein; 1.30A {Homo sapiens}
PDB: 2rgi_A 4duq_A
Length = 98
Score = 24.4 bits (53), Expect = 3.3
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
EE K + +DEN+D Q+ E+
Sbjct: 53 EEGLKKLMGSLDENSDQQVDFQEYA 77
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand
(helix-loop-helix) calcium binding protein, four-HEL
domain, protein engineering; HET: FME; 1.44A {Bos
taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A
1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A
1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Length = 76
Score = 24.1 bits (53), Expect = 3.4
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFLK 64
+ ++D+N DG+++ +EFL
Sbjct: 44 MSTLDEMIEEVDKNGDGEVSFEEFLV 69
>4fl4_A Glycoside hydrolase family 9; structural genomics,
montreal-kingston bacterial structural initiative,
BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB:
3p0d_A
Length = 88
Score = 24.2 bits (53), Expect = 3.4
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 11/56 (19%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLT 58
DV+ +G ++ ++T + + + S P+ AE+ A D N DG++
Sbjct: 24 DVNDDGKVNSTDLTLLKRYVLKA----VSTLPSSKAEKNA-------DVNRDGRVN 68
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F*
1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C*
1o1g_C*
Length = 149
Score = 24.4 bits (54), Expect = 4.1
Identities = 12/64 (18%), Positives = 31/64 (48%), Gaps = 12/64 (18%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D +GNG + E+ ++ + + + + EE + + K E+++G + +
Sbjct: 93 VFDKEGNGTVMGAELRHVLATLGEKM----------TEEEVEELM--KGQEDSNGCINYE 140
Query: 61 EFLK 64
F+K
Sbjct: 141 AFVK 144
Score = 23.6 bits (52), Expect = 7.7
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
++D G+ I ++ I +A LG +N AE +E N +T +
Sbjct: 16 LFDRTGDAKITASQVGDIARA----LGQNPTN-----AEINKILGNPSKEEMNAAAITFE 66
Query: 61 EFL 63
EFL
Sbjct: 67 EFL 69
>1b25_A Protein (formaldehyde ferredoxin oxidoreductase); MOCO,
tungstoenzyme, tungsten containing protein, hypertherm
oxidoreductase; HET: PTT; 1.85A {Pyrococcus furiosus}
SCOP: a.110.1.1 d.152.1.1 PDB: 1b4n_A*
Length = 619
Score = 24.6 bits (53), Expect = 4.2
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 6/64 (9%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGAC--SSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
D + E+ ++ +++ML AC S + K + A T D
Sbjct: 465 SYDPIKAQKVVELQRLRGGLFEMLTACRLPWVEVGLSLDYYPKLLKAITGVT----YTWD 520
Query: 61 EFLK 64
+ K
Sbjct: 521 DLYK 524
>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual
protein-hydrolase complex, cellulosome; 1.90A
{Bacteroides cellulosolvens}
Length = 71
Score = 23.8 bits (52), Expect = 4.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 3 DVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPAD 36
D++G+GVI++ ++ + Q+ +G N AD
Sbjct: 8 DLNGDGVINMADVMILAQSFGKAIGNPGVNEKAD 41
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z
1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z
3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z
2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Length = 156
Score = 24.0 bits (53), Expect = 4.8
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 11/65 (16%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNI-FAKMDENNDGQLTQ 59
+D +G G I E+ ++ A+ + L S E+ + I + E+ +G +
Sbjct: 92 TFDREGQGFISGAELRHVLTALGERL----------SDEDVDEIIKLTDLQEDLEGNVKY 141
Query: 60 DEFLK 64
++F+K
Sbjct: 142 EDFVK 146
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium
SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Length = 465
Score = 24.1 bits (53), Expect = 6.7
Identities = 4/11 (36%), Positives = 7/11 (63%)
Query: 1 MYDVDGNGVID 11
DVDG+ ++
Sbjct: 94 FQDVDGHAYVN 104
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance,
microev0lution, integrated approach, chlorophyll
biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus
pcc 6301} PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A*
2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Length = 427
Score = 24.0 bits (53), Expect = 7.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 1 MYDVDGNGVID 11
+DVDGN ID
Sbjct: 46 AWDVDGNRYID 56
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics,
center for structural genomics of infec diseases,
csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Length = 429
Score = 24.0 bits (53), Expect = 7.1
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 1 MYDVDGNGVID 11
++DVDG ID
Sbjct: 47 LFDVDGKAYID 57
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class,
PLP-dependent transferase-like, bacillus A csgid,
porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus
anthracis}
Length = 434
Score = 24.0 bits (53), Expect = 7.3
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 1 MYDVDGNGVID 11
+DVDGN ID
Sbjct: 49 FWDVDGNKYID 59
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand,
cytosolic, calcium, coiled coil, disease mutation,
glycoprotein, ION transport; NMR {Homo sapiens} PDB:
2kle_A 2kq6_A 2y4q_A
Length = 123
Score = 23.5 bits (50), Expect = 7.4
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 38 AEERAKNIFAKMDENNDGQLTQDEFLK 64
+ + IF K D++ D +LT+ E +
Sbjct: 78 TDAEIEAIFTKYDQDGDQELTEHEHQQ 104
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of
cofactors, prosthetic groups, and carriers, csgid,
cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus
anthracis str} PDB: 3bs8_A*
Length = 429
Score = 23.6 bits (52), Expect = 7.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1 MYDVDGNGVID 11
+YD+DGN ID
Sbjct: 47 VYDIDGNEYID 57
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like,
squid, contractIle protein; 2.60A {Todarodes pacificus}
PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Length = 153
Score = 23.6 bits (52), Expect = 7.7
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 12/64 (18%)
Query: 1 MYDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQD 60
M+D DG G I + +++ + D S EE KN++ + Q +
Sbjct: 93 MFDEDGQGFIPEDYLKDLLENMGDNF----------SKEE-IKNVWKDAP-LKNKQFNYN 140
Query: 61 EFLK 64
+ +
Sbjct: 141 KMVD 144
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics,
NPPSFA, national PROJ protein structural and functional
analyses; 2.30A {Pseudomonas stutzeri}
Length = 453
Score = 23.7 bits (52), Expect = 7.7
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 1 MYDVDGNGVID 11
DVDGN +D
Sbjct: 51 KTDVDGNVYLD 61
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium
free, signaling protein; HET: MSE; 1.15A {Homo sapiens}
SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A
1jwd_A 2cnp_A 2jtt_A
Length = 90
Score = 23.2 bits (50), Expect = 7.8
Identities = 4/25 (16%), Positives = 11/25 (44%)
Query: 39 EERAKNIFAKMDENNDGQLTQDEFL 63
+ + +D N D ++ E++
Sbjct: 50 DAEIARLMEDLDRNKDQEVNFQEYV 74
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA,
structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum
pernix} PDB: 2zsl_A* 2zsm_A*
Length = 434
Score = 23.6 bits (52), Expect = 8.6
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 1 MYDVDGNGVID 11
+Y VDG ++D
Sbjct: 50 LYTVDGARIVD 60
>2ccl_B Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/dockerin
complex, cellulosome, cohesi dockerin, scaffolding,
cellulose degradation; 2.03A {Clostridium thermocellum}
SCOP: a.139.1.1 PDB: 1ohz_B
Length = 63
Score = 22.9 bits (50), Expect = 8.8
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 3 DVDGNGVIDIQEMTKIVQAI 22
DVD NG I+ ++ + + +
Sbjct: 40 DVDKNGSINAADVLLLSRYL 59
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA,
structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus
thermophilus}
Length = 424
Score = 23.6 bits (52), Expect = 8.8
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 1 MYDVDGNGVID 11
++D DGN +D
Sbjct: 46 VWDADGNRYLD 56
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate
isomerase/epimerase; 1.78A {Anabaena variabilis atcc
29413}
Length = 335
Score = 23.5 bits (50), Expect = 9.9
Identities = 2/19 (10%), Positives = 6/19 (31%)
Query: 6 GNGVIDIQEMTKIVQAIYD 24
+ + + +YD
Sbjct: 257 HTSWLPWKSFLTPIVKVYD 275
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory
light chain LC-2, mantle muscle; rigor-like, squid,
contractIle protein; 2.60A {Todarodes pacificus} PDB:
2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Length = 159
Score = 23.3 bits (51), Expect = 10.0
Identities = 12/82 (14%), Positives = 27/82 (32%), Gaps = 16/82 (19%)
Query: 2 YDVDGNGVIDIQEMTKIVQAIYDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDE 61
G ++E I + SS +A+E F D G ++ E
Sbjct: 55 TKKMGEKAYKLEE-------ILPIYEEMSSKDTGTAADE-FMEAFKTFDREGQGLISSAE 106
Query: 62 FLKGCLQ-------DEELSKML 76
++ L+ +++ + +
Sbjct: 107 -IRNVLKMLGERITEDQCNDIF 127
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.313 0.131 0.366
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,175,815
Number of extensions: 55576
Number of successful extensions: 806
Number of sequences better than 10.0: 1
Number of HSP's gapped: 553
Number of HSP's successfully gapped: 446
Length of query: 78
Length of database: 6,701,793
Length adjustment: 47
Effective length of query: 31
Effective length of database: 5,389,506
Effective search space: 167074686
Effective search space used: 167074686
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 51 (23.3 bits)