BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15327
(127 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 238 bits (606), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 112/126 (88%), Positives = 120/126 (95%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
FAEHVFRTFDANGDGTIDFREF+ ALSVTSRGKLEQKL+WAFSMYDLDGNGYIS+ EMLE
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 123
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLL 120
IVQAIYKMV +VMKMPEDESTPEKRT+KIFRQMD N+DG+LSLEEFI GAKSDPSIVRLL
Sbjct: 124 IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLL 183
Query: 121 QCDPQN 126
QCDP +
Sbjct: 184 QCDPSS 189
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 174 bits (441), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/120 (67%), Positives = 99/120 (82%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
FAE+VF FDA+ +G IDF+EF+CALSVTSRG+L KL WAF +YDLD NG IS +EML
Sbjct: 64 FAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLR 123
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLL 120
IV AIYKMVG+++K+PEDE TPEKR +KIF MDKN+DG+L+LEEF EG+K DP+IV L
Sbjct: 124 IVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSAL 183
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 170 bits (431), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 99/120 (82%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
FA VF FD N DG I+F EF+ ALSVTSRG L++KLRWAF +YDLD +GYI+RNEML+
Sbjct: 64 FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLD 123
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLL 120
IV AIY+MVG +++PE+E+TPEKR D+IF MDKN DG+L+L+EF EG+K+DPSIV+ L
Sbjct: 124 IVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQAL 183
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 82 PEKRTDKIFRQMDKNQDGRLSLEEFIEG 109
P K +F D+N+DGR+ EFI+
Sbjct: 61 PTKFATFVFNVFDENKDGRIEFSEFIQA 88
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 153 bits (387), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 97/127 (76%), Gaps = 2/127 (1%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A+HVFR+FDAN DGT+DF+E++ AL +TS GK QKL WAFS+YD+DGNG IS+NE+LE
Sbjct: 64 YAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 123
Query: 61 IVQAIYKMVGT--VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 118
IV AI+KM+ +PEDE+TPEKR +KI+ K D +L+ +EFIEG ++ I+R
Sbjct: 124 IVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEILR 183
Query: 119 LLQCDPQ 125
L+Q +PQ
Sbjct: 184 LIQFEPQ 190
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 20 REFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
+E L L + ++ E+ W S +G I+R E Q IY PE
Sbjct: 10 KEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEF----QTIYSKF-----FPE-- 58
Query: 80 STPEKRTDKIFRQMDKNQDGRLSLEEFI 107
+ P+ +FR D N DG L +E++
Sbjct: 59 ADPKAYAQHVFRSFDANSDGTLDFKEYV 86
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 153 bits (387), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 97/127 (76%), Gaps = 2/127 (1%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A+HVFR+FDAN DGT+DF+E++ AL +TS GK QKL WAFS+YD+DGNG IS+NE+LE
Sbjct: 64 YAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 123
Query: 61 IVQAIYKMVGT--VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 118
IV AI+KM+ +PEDE+TPEKR +KI+ K D +L+ +EFIEG ++ I+R
Sbjct: 124 IVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEILR 183
Query: 119 LLQCDPQ 125
L+Q +PQ
Sbjct: 184 LIQFEPQ 190
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 20 REFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
+E L L + ++ E+ W S +G I+R E Q IY PE
Sbjct: 10 KEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEF----QTIYSKF-----FPE-- 58
Query: 80 STPEKRTDKIFRQMDKNQDGRLSLEEFI 107
+ P+ +FR D N DG L +E++
Sbjct: 59 ADPKAYAQHVFRSFDANSDGTLDFKEYV 86
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 153 bits (386), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 97/127 (76%), Gaps = 2/127 (1%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A+HVFR+FDAN DGT+DF+E++ AL +TS GK QKL WAFS+YD+DGNG IS+NE+LE
Sbjct: 65 YAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 124
Query: 61 IVQAIYKMVGT--VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 118
IV AI+KM+ +PEDE+TPEKR +KI+ K D +L+ +EFIEG ++ I+R
Sbjct: 125 IVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEILR 184
Query: 119 LLQCDPQ 125
L+Q +PQ
Sbjct: 185 LIQFEPQ 191
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 20 REFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
+E L L + ++ E+ W S +G I+R E Q IY PE
Sbjct: 11 KEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEF----QTIYSKF-----FPE-- 59
Query: 80 STPEKRTDKIFRQMDKNQDGRLSLEEFI 107
+ P+ +FR D N DG L +E++
Sbjct: 60 ADPKAYAQHVFRSFDANSDGTLDFKEYV 87
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 152 bits (384), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 97/127 (76%), Gaps = 2/127 (1%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A+HVFR+FDAN DGT+DF++++ AL +TS GK QKL WAFS+YD+DGNG IS+NE+LE
Sbjct: 64 YAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 123
Query: 61 IVQAIYKMVGT--VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 118
IV AI+KM+ +PEDE+TPEKR +KI+ K D +L+ +EFIEG ++ I+R
Sbjct: 124 IVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEILR 183
Query: 119 LLQCDPQ 125
L+Q +PQ
Sbjct: 184 LIQFEPQ 190
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 20 REFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
+E L L + ++ E+ W S +G I+R E Q IY PE
Sbjct: 10 KEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEF----QTIYSKF-----FPE-- 58
Query: 80 STPEKRTDKIFRQMDKNQDGRLSLEEFI 107
+ P+ +FR D N DG L ++++
Sbjct: 59 ADPKAYAQHVFRSFDANSDGTLDFKQYV 86
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 152 bits (383), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 97/127 (76%), Gaps = 2/127 (1%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A+HVFR+FDAN DGT+DF++++ AL +TS GK QKL WAFS+YD+DGNG IS+NE+LE
Sbjct: 64 YAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 123
Query: 61 IVQAIYKMVGT--VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 118
IV AI+KM+ +PEDE+TPEKR +KI+ K D +L+ +EFIEG ++ I+R
Sbjct: 124 IVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEILR 183
Query: 119 LLQCDPQ 125
L+Q +PQ
Sbjct: 184 LIQFEPQ 190
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 20 REFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
+E L L + ++ E+ W S +G I+R E Q IY PE
Sbjct: 10 KEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEF----QTIYSKF-----FPE-- 58
Query: 80 STPEKRTDKIFRQMDKNQDGRLSLEEFI 107
+ P+ +FR D N DG L ++++
Sbjct: 59 ADPKAYAQHVFRSFDANSDGTLDFKQYV 86
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 151 bits (381), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 96/126 (76%), Gaps = 2/126 (1%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A+HVFR+FDAN DGT+DF+E++ AL +TS GK QKL WAFS+YD+DGNG IS+NE+LE
Sbjct: 64 YAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 123
Query: 61 IVQAIYKMVGT--VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 118
IV AI+KM+ +PEDE+TPEKR +KI+ K D +L+ +EFIEG ++ I+R
Sbjct: 124 IVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEILR 183
Query: 119 LLQCDP 124
L+Q +P
Sbjct: 184 LIQFEP 189
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 20 REFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
+E L L + ++ E+ W S +G I+R E Q IY PE
Sbjct: 10 KEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEF----QTIYSKF-----FPE-- 58
Query: 80 STPEKRTDKIFRQMDKNQDGRLSLEEFI 107
+ P+ +FR D N DG L +E++
Sbjct: 59 ADPKAYAQHVFRSFDANSDGTLDFKEYV 86
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 150 bits (379), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 98/127 (77%), Gaps = 2/127 (1%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A+HVFR+FD+N DGT+DF+E++ AL T+ GK QKL WAFS+YD+DGNG IS+NE+LE
Sbjct: 72 YAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 131
Query: 61 IVQAIYKMVGT--VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 118
IV AI+K + V +P+DE+TPEKR +KI++ KN D +L+ +EFIEG ++ I+R
Sbjct: 132 IVXAIFKXITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLANKEILR 191
Query: 119 LLQCDPQ 125
L+Q +PQ
Sbjct: 192 LIQFEPQ 198
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 20 REFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
+E L L + ++ E+ W S G I++ + Q+IY P+
Sbjct: 18 KEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQF----QSIYAKF-----FPD-- 66
Query: 80 STPEKRTDKIFRQMDKNQDGRLSLEEFI 107
+ P+ +FR D N DG L +E++
Sbjct: 67 TDPKAYAQHVFRSFDSNLDGTLDFKEYV 94
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 145 bits (367), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 91/121 (75%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
FA H+F FD + +G I F EF+ LS TSRG LE+KL WAF +YDL+ +GYI+ +EML
Sbjct: 64 FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLT 123
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLL 120
IV ++YKM+G+++ + EDE+TPE R KIF+ MDKN+DG ++L+EF EG+K DPSI+ L
Sbjct: 124 IVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGAL 183
Query: 121 Q 121
Sbjct: 184 N 184
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 124 bits (310), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+ E +FR FD NGD TIDF E++ AL++ RG LE KL+W F +YD D NG I R E+L+
Sbjct: 60 YVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLD 119
Query: 61 IVQAIYKMVGTVMKMPEDES-----TPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPS 115
IV++IYK+ E E TPE+ D+IF +D+N DG+LSL EF+EGA+ D
Sbjct: 120 IVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKW 179
Query: 116 IVRLLQCD 123
++++LQ D
Sbjct: 180 VMKMLQMD 187
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 118 bits (296), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 83/121 (68%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A ++F FD G++ F +F+ ALS+ RG + +KLRW F++YD++ +GYI++ EM++
Sbjct: 54 YAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMD 113
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLL 120
IV+AIY M+G E TP + D F++MDKN+DG ++L+EF+E + D +I+R L
Sbjct: 114 IVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSL 173
Query: 121 Q 121
Q
Sbjct: 174 Q 174
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 118 bits (295), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 83/122 (68%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A ++F FD G++ F +F+ ALS+ RG + +KLRW F++YD++ +GYI++ EM++
Sbjct: 57 YAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMD 116
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLL 120
IV+AIY M+G E TP + D F++MDKN+DG ++L+EF+E + D +I+R L
Sbjct: 117 IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDDNIMRSL 176
Query: 121 QC 122
Q
Sbjct: 177 QL 178
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 118 bits (295), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 83/121 (68%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A ++F FD G++ F +F+ ALS+ RG + +KLRW F++YD++ +GYI++ EM++
Sbjct: 54 YAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMD 113
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLL 120
IV+AIY M+G E TP + D F++MDKN+DG ++L+EF+E + D +I+R L
Sbjct: 114 IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSL 173
Query: 121 Q 121
Q
Sbjct: 174 Q 174
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 117 bits (294), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 83/121 (68%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A ++F FD G++ F +F+ ALS+ RG + +KLRW F++YD++ +GYI++ EM++
Sbjct: 90 YAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMD 149
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLL 120
IV+AIY M+G E TP + D F++MDKN+DG ++L+EF+E + D +I+R L
Sbjct: 150 IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSL 209
Query: 121 Q 121
Q
Sbjct: 210 Q 210
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 112 bits (279), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 82/121 (67%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A +F FD + +G + F +F+ LS+ RG +++KL WAF++YD++ +GYI++ EML+
Sbjct: 103 YAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLD 162
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLL 120
I++AIY M+G E P + + F++MDKN+DG ++++EFIE + D +I+R +
Sbjct: 163 IMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSM 222
Query: 121 Q 121
Q
Sbjct: 223 Q 223
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 84/139 (60%), Gaps = 18/139 (12%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+ E +F TFD N DG IDF E++ ALS+ +GK++QKLRW F +YD+DGNG I R E+L
Sbjct: 53 YVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLN 112
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSD------- 113
I++AI + + T E+ T+ +F ++D N DG LSLEEF+EG + D
Sbjct: 113 IIKAI-----RAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDIL 167
Query: 114 ------PSIVRLLQCDPQN 126
IV+L+Q D +N
Sbjct: 168 TRSLDLTHIVKLIQNDGKN 186
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 82/121 (67%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+A +F FDA+G+G I F +F+ LS+ RG + +KL+WAF++YD++ +G I++ EML
Sbjct: 130 YAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLA 189
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLL 120
I+++IY M+G E P + ++ F++MD+NQDG ++++EF+E + D +I+ +
Sbjct: 190 IMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSM 249
Query: 121 Q 121
Q
Sbjct: 250 Q 250
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 75/118 (63%), Gaps = 6/118 (5%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
+ V+ TFD N DG +DF EF+ A+++ + K+EQKL+W F +YD DGNG I +NE+L++
Sbjct: 60 DQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMF 119
Query: 63 QAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLL 120
A+ + G + +PE+ + +F ++D N DG L+LEEFI G D ++ ++
Sbjct: 120 MAVQALNG------QQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIV 171
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 63/93 (67%)
Query: 29 TSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDK 88
+ G + +KL+WAF++YD++ +GYI++ EML I+++IY M+G E P + ++
Sbjct: 2 SHMGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVER 61
Query: 89 IFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQ 121
F +MD+NQDG +++EEF+E + D +I+ +Q
Sbjct: 62 FFEKMDRNQDGVVTIEEFLEACQKDENIMSSMQ 94
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 8/107 (7%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTS-RGKLEQKLRWAFSMYDLDGNGYISRNEML 59
+ V FD +G+G +DF+EF+ +S S +G EQKLR+AF +YD+D +GYIS E+
Sbjct: 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 98
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
++++ MVG +K ++ ++ DK DK+ DGR+S EEF
Sbjct: 99 QVLKM---MVGNNLK----DTQLQQIVDKTIINADKDGDGRISFEEF 138
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 8/107 (7%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTS-RGKLEQKLRWAFSMYDLDGNGYISRNEML 59
+ V FD +G+G +DF+EF+ +S S +G EQKLR+AF +YD+D +GYIS E+
Sbjct: 40 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 99
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
++++ MVG +K ++ ++ DK DK+ DGR+S EEF
Sbjct: 100 QVLKM---MVGNNLK----DTQLQQIVDKTIINADKDGDGRISFEEF 139
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 8/107 (7%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTS-RGKLEQKLRWAFSMYDLDGNGYISRNEML 59
+ V FD +G+G +DF+EF+ +S S +G EQKLR+AF +YD+D +GYIS E+
Sbjct: 53 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 112
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
++++ MVG +K ++ ++ DK DK+ DGR+S EEF
Sbjct: 113 QVLKM---MVGNNLK----DTQLQQIVDKTIINADKDGDGRISFEEF 152
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 8/107 (7%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTS-RGKLEQKLRWAFSMYDLDGNGYISRNEML 59
+ V FD +G+G +DF+EF+ +S S +G EQKLR+AF +YD+D +GYIS E+
Sbjct: 54 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 113
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
++++ MVG +K ++ ++ DK DK+ DGR+S EEF
Sbjct: 114 QVLKM---MVGNNLK----DTQLQQIVDKTIINADKDGDGRISFEEF 153
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSV-TSRGKLEQKLRWAFSMYDLDGNGYISRNEML 59
FA+ +F FD +G I+F EF+ +L V + +K+++AF +YDL G+I R E+
Sbjct: 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 118
E+V A+ V+ E E DK F Q D+ DG++ ++E+ + +PS+++
Sbjct: 135 EMVVALLHESELVL----SEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIK 189
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSV-TSRGKLEQKLRWAFSMYDLDGNGYISRNEML 59
FA+ +F FD +G I+F EF+ +L V + +K+++AF +YDL G+I R E+
Sbjct: 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 118
E+V A+ V+ E E DK F Q D+ DG++ ++E+ + +PS+++
Sbjct: 135 EMVVALLHESELVL----SEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIK 189
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSV-TSRGKLEQKLRWAFSMYDLDGNGYISRNEML 59
FA+ VF FD +G + F EF ALSV ++ K+ ++F +YDL G+I R E+
Sbjct: 86 FADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVK 145
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 118
++V A G +K ++ E DK F + D DG++ EE+ PS+++
Sbjct: 146 QMVVATLAESGMNLK----DTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 200
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSV-TSRGKLEQKLRWAFSMYDLDGNGYISRNEML 59
FA+ VF FD +G + F EF ALSV ++ K+ ++F +YDL G+I R E+
Sbjct: 55 FADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVK 114
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 118
++V A G +K ++ E DK F + D DG++ EE+ PS+++
Sbjct: 115 QMVVATLAESGMNLK----DTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 169
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+GDGTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 412
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 413 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 388 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+GDGTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 56 DADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-- 113
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 114 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+GDGTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 348 DADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 404
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 405 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 435
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 380 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 413
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 414 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 358 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 414
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 415 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 445
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 390 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 320 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 376
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 377 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 407
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 352 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 411
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 113
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 114 ---------GEKLTDEEVDQMIREADIDGDGQVNYEEFVQ 144
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMMT 147
Query: 64 A 64
A
Sbjct: 148 A 148
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 12/99 (12%)
Query: 10 DANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
DA+G+GTIDF EFL ++ + +++R AF ++D DGNGYIS E+ ++ +
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNL---- 107
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ + + DG+++ EEF++
Sbjct: 108 --------GEKLTDEEVDEMIREANIDGDGQVNYEEFVQ 138
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 413
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 414 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 323 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 379
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 380 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 410
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 355 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 414
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 323 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 379
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 380 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 410
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 355 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 414
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 60 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-- 117
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 118 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFVQ 147
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 91 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 150
Query: 64 A 64
A
Sbjct: 151 A 151
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 113
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 114 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Query: 64 A 64
A
Sbjct: 148 A 148
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 110
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 111 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 85 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 144
Query: 64 A 64
A
Sbjct: 145 A 145
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-- 114
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 115 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Query: 64 A 64
A
Sbjct: 148 A 148
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 58 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-- 115
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 116 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFVQ 145
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 89 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 148
Query: 64 A 64
A
Sbjct: 149 A 149
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-- 114
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 115 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Query: 64 A 64
A
Sbjct: 148 A 148
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 110
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 111 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 85 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 144
Query: 64 A 64
A
Sbjct: 145 A 145
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 53 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 109
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 110 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 140
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 84 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 143
Query: 64 A 64
A
Sbjct: 144 A 144
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 108
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 109 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 139
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 83 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 142
Query: 64 A 64
A
Sbjct: 143 A 143
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 113
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 114 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Query: 64 A 64
A
Sbjct: 148 A 148
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-- 113
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 114 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 146
Query: 64 A 64
A
Sbjct: 147 A 147
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-- 114
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 115 ----------EXLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Query: 64 A 64
A
Sbjct: 148 A 148
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-- 113
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 114 ----------EXLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 146
Query: 64 A 64
A
Sbjct: 147 A 147
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 62 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-- 119
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 120 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFVQ 149
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 93 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 152
Query: 64 A 64
A
Sbjct: 153 A 153
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-- 113
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 114 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 146
Query: 64 A 64
A
Sbjct: 147 A 147
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 55 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-- 112
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 113 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFVQ 142
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 110
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 111 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 357 DADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 413
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ D + DG+++ EEF++
Sbjct: 414 ---------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 13/98 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNG+IS E+ ++ +
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDS-EEEIREAFRVFDKDGNGFISAAELRHVMTNLG--- 111
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E ++ D++ R+ D + DG+++ EEF+
Sbjct: 112 ---------EKLTDEEVDEMIREADIDGDGQVNYEEFV 140
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 16/103 (15%)
Query: 10 DANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
D +G GT+DF EFL ++ S+GK E++L F M+D + +GYI E+ ++QA
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT 124
Query: 66 YKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E+ E +++ + DKN DGR+ +EF+E
Sbjct: 125 G------------ETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
+FR FD N DG ID E L T E + D + +G I +E LE ++
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Query: 65 I 65
+
Sbjct: 160 V 160
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 14 DGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVM 73
DG+I +E + + + ++L+ D DG+G + +E L V V
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL---------VMMVR 83
Query: 74 KMPED-ESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
M +D + E+ +FR DKN DG + LEE
Sbjct: 84 SMKDDSKGKTEEELSDLFRMFDKNADGYIDLEEL 117
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNG+IS E+ ++ +
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-- 114
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E ++ D++ R+ D + DG+++ EEF+
Sbjct: 115 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFV 143
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNG+IS E+ ++ +
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-- 114
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E ++ D++ R+ D + DG+++ EEF+
Sbjct: 115 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFV 143
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNG+IS E+ ++ +
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-- 113
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E ++ D++ R+ D + DG+++ EEF+
Sbjct: 114 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFV 142
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++ +
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 112
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ + + DG+++ EEF++
Sbjct: 113 ---------GEKLTDEEVDEMIREANIDGDGQVNYEEFVQ 143
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL + + E+++R AF ++D DGNGYIS E+ +
Sbjct: 57 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAEL--------RH 108
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
V T + E ++ D+ R+ D + DG+++ EEF++
Sbjct: 109 VXTNLG----EKLTDEEVDQXIREADIDGDGQVNYEEFVQ 144
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNG+IS E+ ++ +
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-- 113
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E ++ D++ R+ D + DG+++ EEF+
Sbjct: 114 ----------EKLTDEEVDEMIREADIDGDGQVNYEEFV 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL + + E+++R AF ++D DGNGYIS E+ +
Sbjct: 56 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAEL--------RH 107
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
V T + E ++ D+ R+ D + DG+++ EEF++
Sbjct: 108 VXTNLG----EKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 16/103 (15%)
Query: 10 DANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
D +G GT+DF EFL ++ S+GK E++L F M+D + +GYI +E+ ++QA
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQAT 124
Query: 66 YKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E+ E +++ + DKN DGR+ +EF+E
Sbjct: 125 G------------ETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
+FR +D N DG ID E L T E + D + +G I +E LE ++
Sbjct: 100 LFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Query: 65 I 65
+
Sbjct: 160 V 160
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 14 DGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVM 73
DG+I +E + + + ++L+ D DG+G + +E L V V
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL---------VMMVR 83
Query: 74 KMPED-ESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
M +D + E+ +FR DKN DG + L+E
Sbjct: 84 SMKDDSKGKSEEELSDLFRMWDKNADGYIDLDEL 117
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNG+IS E+ ++ +
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-- 114
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E ++ D++ R+ D + DG+++ EEF+
Sbjct: 115 ----------EKLTDEEVDEMIRESDIDGDGQVNYEEFV 143
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 16/103 (15%)
Query: 10 DANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
D +G GT+DF EFL ++ S+GK E++L F M+D + +GYI E+ ++QA
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT 124
Query: 66 YKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E+ E +++ + DKN DGR+ +EF+E
Sbjct: 125 G------------ETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
+FR FD N DG ID E L T E + D + +G I +E LE ++
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Query: 65 I 65
+
Sbjct: 160 V 160
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 14 DGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVM 73
DG+I +E + + + ++L+ D DG+G + +E L V V
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL---------VMMVR 83
Query: 74 KMPED-ESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
M +D + E+ +FR DKN DG + LEE
Sbjct: 84 SMKDDSKGKSEEELSDLFRMFDKNADGYIDLEEL 117
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 10 DANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
D +G GT+DF EFL + S+GK E++L F M+D + +GYI E+ ++QA
Sbjct: 65 DEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT 124
Query: 66 YKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 112
E+ E +++ + DKN DGR+ +EF+E K
Sbjct: 125 G------------ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
+FR FD N DG ID E L T E + D + +G I +E LE ++
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Query: 65 I 65
+
Sbjct: 160 V 160
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 14 DGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVM 73
DG I +E + + + ++L+ D DG+G + +E L M+ M
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL-------VMMVRCM 85
Query: 74 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
K T E+ +D +FR DKN DG + LEE
Sbjct: 86 KDDSKGKTEEELSD-LFRMFDKNADGYIDLEEL 117
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 5 VFRTFDANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+ D +G GTIDF EFL + ++GK E++L F ++D + +GYI E+ E
Sbjct: 58 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAE 117
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
I +A E ++ + + + DKN DGR+ +EF+
Sbjct: 118 IFRA------------SGEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AF M+D DG G IS E+ GTVM+M T E+ D I ++D++
Sbjct: 18 EFKAAFDMFDADGGGDISVKEL-----------GTVMRMLGQTPTKEE-LDAIIEEVDED 65
Query: 97 QDGRLSLEEFI 107
G + EEF+
Sbjct: 66 GSGTIDFEEFL 76
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 6 FRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
FR FD N DG ID E + ++++ D + +G I +E L++++ +
Sbjct: 99 FRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGV 158
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 16/103 (15%)
Query: 10 DANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
D +G GT+DF EFL ++ S+GK E++L F M D + +GYI +E+ ++QA
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQAT 124
Query: 66 YKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E+ E +++ + DKN DGR+ +EF+E
Sbjct: 125 G------------ETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
+FR D N DG ID E L T E + D + +G I +E LE ++
Sbjct: 100 LFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Query: 65 I 65
+
Sbjct: 160 V 160
Score = 32.0 bits (71), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 14 DGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVM 73
DG+I +E + + + ++L+ D DG+G + +E L V V
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL---------VMMVR 83
Query: 74 KMPED-ESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
M +D + E+ +FR DKN DG + L+E
Sbjct: 84 SMKDDSKGKSEEELSDLFRMXDKNADGYIDLDEL 117
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 5 VFRTFDANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+ D +G GTIDF EFL + ++GK E++L F ++D + +GYI E+ E
Sbjct: 58 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAE 117
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
I +A E ++ + + + DKN DGR+ +EF+
Sbjct: 118 IFRA------------SGEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AF M+D DG G IS E+ GTVM+M T E+ D I ++D++
Sbjct: 18 EFKAAFDMFDADGGGDISVKEL-----------GTVMRMLGQTPTKEE-LDAIIEEVDED 65
Query: 97 QDGRLSLEEFI 107
G + EEF+
Sbjct: 66 GSGTIDFEEFL 76
Score = 28.9 bits (63), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
+FR FD N DG ID E + ++++ D + +G I +E L++++
Sbjct: 97 ELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156
Query: 64 AI 65
+
Sbjct: 157 GV 158
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 16/103 (15%)
Query: 10 DANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
D +G GT+DF EFL ++ S+GK E++L F M+D + +GYI +E+ ++QA
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQAT 124
Query: 66 YKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E+ E +++ + DKN DGR+ +E++E
Sbjct: 125 G------------ETITEDDIEELMKDGDKNNDGRIDYDEWLE 155
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
+FR FD N DG ID E L T E + D + +G I +E LE ++
Sbjct: 100 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFMKG 159
Query: 65 I 65
+
Sbjct: 160 V 160
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 14 DGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVM 73
DG+I +E + + + ++L+ D DG+G + +E L V V
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL---------VMMVR 83
Query: 74 KMPED-ESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
M +D + E+ +FR DKN DG + L+E
Sbjct: 84 SMKDDSKGKSEEELSDLFRMFDKNADGYIDLDEL 117
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTI+F EFL + + E+++R AF ++D DGNGYIS E+ + +
Sbjct: 56 DADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-- 113
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D+ R+ D + DG+++ EEF++
Sbjct: 114 ----------EKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 5 VFRTFDANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+ D +G GTIDF EFL + ++GK E++L F ++D + +G+I E+ E
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGE 120
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
I++A E E+ + + + DKN DGR+ +EF+
Sbjct: 121 ILRATG------------EHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AF M+D DG G IS E+ GTVM+M T E+ D I ++D++
Sbjct: 21 EFKAAFDMFDADGGGDISTKEL-----------GTVMRMLGQNPTKEE-LDAIIEEVDED 68
Query: 97 QDGRLSLEEFI 107
G + EEF+
Sbjct: 69 GSGTIDFEEFL 79
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
E FR FD N DG ID E L T E+ + D + +G I +E L+++
Sbjct: 99 EDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Query: 63 QAI 65
+ +
Sbjct: 159 EGV 161
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 5 VFRTFDANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+ D +G GTIDF EFL + ++GK E++L F ++D + +G+I E+ E
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGE 120
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
I++A E E+ + + + DKN DGR+ +EF+
Sbjct: 121 ILRATG------------EHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AF M+D DG G IS E+ GTVM+M T E+ D I ++D++
Sbjct: 21 EFKAAFDMFDADGGGDISTKEL-----------GTVMRMLGQNPTKEE-LDAIIEEVDED 68
Query: 97 QDGRLSLEEFI 107
G + EEF+
Sbjct: 69 GSGTIDFEEFL 79
Score = 32.0 bits (71), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
+ FR FD N DG ID E L T E+ + D + +G I +E L++++
Sbjct: 100 NCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Query: 64 AI 65
+
Sbjct: 160 GV 161
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 13/99 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + + E++L AF ++D DGNG IS E+ ++ + +
Sbjct: 56 DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE- 114
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
K+ +DE D++ R+ D + DG ++ EEF+
Sbjct: 115 -----KLTDDE------VDEMIREADIDGDGHINYEEFV 142
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 13/99 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + + E++L AF ++D DGNG IS E+ ++ + +
Sbjct: 56 DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE- 114
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
K+ +DE D++ R+ D + DG ++ EEF+
Sbjct: 115 -----KLTDDE------VDEMIREADIDGDGHINYEEFV 142
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 5 VFRTFDANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+ D +G GTIDF EFL + ++GK E++L F ++D + +G+I E+ E
Sbjct: 58 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGE 117
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
I++A E E+ + + + DKN DGR+ +EF+
Sbjct: 118 ILRATG------------EHVTEEDIEDLMKDSDKNNDGRIDFDEFL 152
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AF M+D DG G IS E+ GTVM+M T E+ D I ++D++
Sbjct: 18 EFKAAFDMFDADGGGDISTKEL-----------GTVMRMLGQNPTKEE-LDAIIEEVDED 65
Query: 97 QDGRLSLEEFI 107
G + EEF+
Sbjct: 66 GSGTIDFEEFL 76
Score = 32.3 bits (72), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
+ FR FD N DG ID E L T E+ + D + +G I +E L++++
Sbjct: 97 NCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 156
Query: 64 AI 65
+
Sbjct: 157 GV 158
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 5 VFRTFDANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+ D +G GTIDF EFL + ++GK E++L F ++D + +G+I E+ E
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGE 120
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
I++A E E+ + + + DKN DGR+ +EF+
Sbjct: 121 ILRATG------------EHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AF M+D DG G IS E+ GTVM+M T E+ D I ++D++
Sbjct: 21 EFKAAFDMFDADGGGDISTKEL-----------GTVMRMLGQNPTKEE-LDAIIEEVDED 68
Query: 97 QDGRLSLEEFI 107
G + EEF+
Sbjct: 69 GSGTIDFEEFL 79
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 6 FRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
FR FD N DG ID E L T E+ + D + +G I +E L++++ +
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 16/103 (15%)
Query: 10 DANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
D +G GT+DF EFL ++ S+GK E++L F M+D + +GYI +E+ ++QA
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQAT 124
Query: 66 YKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E+ E +++ + DKN DGR+ +E +E
Sbjct: 125 G------------ETITEDDIEELMKDGDKNNDGRIDYDEXLE 155
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
+FR FD N DG ID E L T E + D + +G I +E LE ++
Sbjct: 100 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLEFMKG 159
Query: 65 I 65
+
Sbjct: 160 V 160
Score = 32.0 bits (71), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 14 DGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVM 73
DG+I +E + + + ++L+ D DG+G + +E L V V
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL---------VMMVR 83
Query: 74 KMPED-ESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
M +D + E+ +FR DKN DG + L+E
Sbjct: 84 SMKDDSKGKSEEELSDLFRMFDKNADGYIDLDEL 117
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 25/130 (19%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEI 61
AE +F+ DANGDG++ + E +S K EQ L+ F D+DGNG I E +
Sbjct: 2 AEALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKF 61
Query: 62 VQAI-----------YKMVGTVM------KMPEDESTP-------EKRTDKIFRQMDKNQ 97
A+ K++ +M K+ ++E T EK D+I + D N
Sbjct: 62 AAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMKA-DANG 120
Query: 98 DGRLSLEEFI 107
DG ++LEEF+
Sbjct: 121 DGYITLEEFL 130
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 5 VFRTFDANGDGTIDFREFLC----ALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+ D +G GTIDF EFL + ++GK E++L F ++D + +G+I E+ E
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGE 120
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
I++A E E+ + + + DKN DGR+ +EF+
Sbjct: 121 ILRATG------------EHVIEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 38.5 bits (88), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AF M+D DG G IS E+ GTVM+M T E+ D I ++D++
Sbjct: 21 EFKAAFDMFDADGGGDISTKEL-----------GTVMRMLGQNPTKEE-LDAIIEEVDED 68
Query: 97 QDGRLSLEEFI 107
G + EEF+
Sbjct: 69 GSGTIDFEEFL 79
Score = 33.5 bits (75), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
+ FR FD N DG ID E L T +E+ + D + +G I +E L++++
Sbjct: 100 NCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Query: 64 AI 65
+
Sbjct: 160 GV 161
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 13/99 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E++L+ AF ++D D NG+IS E+ ++ +
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-- 114
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E ++ D++ R+ D + DG+++ EEF+
Sbjct: 115 ----------EKLTDEEVDEMIREADVDGDGQINYEEFV 143
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
F FD +GDG I +E + + E +L+ + D DGNG I E L ++
Sbjct: 15 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM- 73
Query: 64 AIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
KM + +S E + + FR DK+Q+G +S E
Sbjct: 74 --------ARKMKDTDSEEELK--EAFRVFDKDQNGFISAAEL 106
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 25/131 (19%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEI 61
AE +F+ D NGDG + + E +S K EQ L+ F D DGNG I +NE +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 62 ---------------VQAIYKM--VGTVMKMPEDESTP-------EKRTDKIFRQMDKNQ 97
++ +YK+ V K+ ++E T EK +++ + D N
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMK-ADANG 120
Query: 98 DGRLSLEEFIE 108
DG ++LEEF+E
Sbjct: 121 DGYITLEEFLE 131
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 25/131 (19%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEI 61
AE +F+ D NGDG + + E +S K EQ L+ F D DGNG I +NE +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 62 ---------------VQAIYKM--VGTVMKMPEDESTP-------EKRTDKIFRQMDKNQ 97
++ +YK+ V K+ ++E T EK +++ + D N
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMK-ADANG 120
Query: 98 DGRLSLEEFIE 108
DG ++LEEF+E
Sbjct: 121 DGYITLEEFLE 131
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 13/99 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTI+F EFL ++ + E++L+ AF ++D D NGYIS +E+ + M
Sbjct: 56 DADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHV------M 109
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
+ K+ ++E +++ ++ D + DG+++ EEF+
Sbjct: 110 INLGEKLTDEE------VEQMIKEADLDGDGQVNYEEFV 142
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
F FD +GDG I E + + E++L+ S D DGNG I +E L ++
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
Query: 64 AIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
K ++ E+ + F+ DK+Q+G +S E
Sbjct: 74 KKVK-----------DTDAEEELKEAFKVFDKDQNGYISASEL 105
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 9 FDANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYK 67
D +G+GT+DF EFL ++ + E+++R AF ++D DGNG++S E+ ++ +
Sbjct: 55 IDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLG- 113
Query: 68 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E ++ D++ R D + DG+++ EEF+
Sbjct: 114 -----------EKLSDEEVDEMIRAADTDGDGQVNYEEFV 142
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 13/99 (13%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
DA+G+GTIDF EFL ++ + E++L+ AF ++D D NG+IS E+ ++ +
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-- 114
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E ++ D++ R+ D + DG+++ +EF+
Sbjct: 115 ----------EKLTDEEVDEMIREADVDGDGQINYDEFV 143
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
F FD +GDG I +E + + E +L+ + D DGNG I E L ++
Sbjct: 15 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM- 73
Query: 64 AIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
KM + +S E + + FR DK+Q+G +S E
Sbjct: 74 --------ARKMKDTDSEEELK--EAFRVFDKDQNGFISAAEL 106
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 10 DANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
D + GTID++EF+ A ++ + E L AF+ +D DG+GYI+ +E+
Sbjct: 73 DVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDEL----------- 121
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
+ E+ + R +++ R +D++ DGR+ EF+
Sbjct: 122 ---QQACEEFGVEDVRIEELXRDVDQDNDGRIDYNEFV 156
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 20/104 (19%)
Query: 9 FDANGDGTIDFREFLCA----LSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
D +G G+I++ EF+ + + SR ++E+ AF M+D DG+G IS E+ ++
Sbjct: 390 LDMDGSGSIEYSEFIASAIDRTILLSRERMER----AFKMFDKDGSGKISTKELFKL--- 442
Query: 65 IYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
+ + ++M E ES I Q+D N+DG + EF+E
Sbjct: 443 -FSQADSSIQMEELES--------IIEQVDNNKDGEVDFNEFVE 477
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
E F+ FD +G G I +E S ++L D + +G + NE +E++
Sbjct: 420 ERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Query: 63 Q 63
Q
Sbjct: 480 Q 480
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 84 KRTDKIFRQMDKNQDGRLSLEEFIEG 109
K+ +IFR++D N DG L +E + G
Sbjct: 331 KQLTEIFRKLDTNNDGMLDRDELVRG 356
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
DA+G+GTIDF EFL ++ + E+++R AF ++D DGNGYIS E+ ++
Sbjct: 11 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 64
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 13/99 (13%)
Query: 11 ANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
A+G+GTIDF +FL ++ + E+++R AF ++ DGNGYIS ++ ++ +
Sbjct: 358 ADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNL---- 413
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
E ++ D++ R+ + DG+++ E+F++
Sbjct: 414 --------GEKLTDEEVDEMIREAGIDGDGQVNYEQFVQ 444
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 19/105 (18%)
Query: 9 FDANGDGTIDFREF------LCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
FD G+G IDF F V +++Q+LR AF +YD +GNGYIS + M EI+
Sbjct: 59 FDPFGNGDIDFDSFKIIGARFLGEEVNPE-QMQQELREAFRLYDKEGNGYISTDVMREIL 117
Query: 63 QAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
+ DE+ + D + ++D + G + EEF+
Sbjct: 118 AEL------------DETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 10 DANGDGTIDFREFLCALSVTSRGKLEQKLRW-AFSMYDLDGNGYISRNEMLEIVQAIYKM 68
D++G G ID+ EF+ A R +L +KL + AF ++D+D +G I+ E+ I+ K
Sbjct: 97 DSDGSGKIDYTEFIAA--ALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKK 154
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAK 111
G + + + R ++ R +DKN DG++ EF E K
Sbjct: 155 -GNITQRDVN------RVKRMIRDVDKNNDGKIDFHEFSEMMK 190
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDK 95
+KL+ F + D DG GYI++ ++ + ++ +K+P + D + Q+D
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEK------DGLKLPYN-------FDLLLDQIDS 98
Query: 96 NQDGRLSLEEFIEGA 110
+ G++ EFI A
Sbjct: 99 DGSGKIDYTEFIAAA 113
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
KL +AF +YDLD +G ISR+EML++++ MVG + E E D+ ++ D++
Sbjct: 115 KLHYAFQLYDLDRDGKISRHEMLQVLRL---MVGVQVT----EEQLENIADRTVQEADED 167
Query: 97 QDGRLSLEEF 106
DG +S EF
Sbjct: 168 GDGAVSFVEF 177
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 10 DANGDGTIDFREFLCALSVTSRGKLEQKLRW-AFSMYDLDGNGYISRNEMLEIVQAIYKM 68
D++G G ID+ EFL A R +L +KL + AF ++D+D +G I+ E+ ++ K
Sbjct: 100 DSDGSGNIDYTEFLAA--AIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKR 157
Query: 69 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAK 111
G + + ++ K+ R++DKN DG++ EF E K
Sbjct: 158 -GNITERDVNQ------VKKMIREVDKNGDGKIDFYEFSEMMK 193
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCALSVT 29
+ + R D NGDG IDF EF + +T
Sbjct: 168 VKKMIREVDKNGDGKIDFYEFSEMMKLT 195
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEI 61
AE +F+ D NGDG + + E +S K EQ L+ F D DGNG I +NE +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 62 VQAI 65
+I
Sbjct: 62 YGSI 65
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 49/141 (34%)
Query: 5 VFRTFDA------------------------------------NGDGTIDFREFLCALSV 28
F FD +GDGTIDF EFL ++
Sbjct: 315 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 374
Query: 29 TSR-GKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTD 87
+ E+++R AF ++D DGNGYIS E+ ++ + E ++ D
Sbjct: 375 KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL------------GEKLTDEEVD 422
Query: 88 KIFRQMDKNQDGRLSLEEFIE 108
++ R+ D + DG+++ EEF++
Sbjct: 423 EMIREADIDGDGQVNYEEFVQ 443
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 388 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 49/141 (34%)
Query: 5 VFRTFDA------------------------------------NGDGTIDFREFLCALSV 28
F FD +GDGTIDF EFL ++
Sbjct: 316 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 375
Query: 29 TSR-GKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTD 87
+ E+++R AF ++D DGNGYIS E+ ++ + E ++ D
Sbjct: 376 KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL------------GEKLTDEEVD 423
Query: 88 KIFRQMDKNQDGRLSLEEFIE 108
++ R+ D + DG+++ EEF++
Sbjct: 424 EMIREADIDGDGQVNYEEFVQ 444
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 49/141 (34%)
Query: 5 VFRTFDANGD------------------------------------GTIDFREFLCALSV 28
F FD +GD GTIDF EFL ++
Sbjct: 316 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 375
Query: 29 TSR-GKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTD 87
+ E+++R AF ++D DGNGYIS E+ ++ + E ++ D
Sbjct: 376 KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL------------GEKLTDEEVD 423
Query: 88 KIFRQMDKNQDGRLSLEEFIE 108
++ R+ D + DG+++ EEF++
Sbjct: 424 EMIREADIDGDGQVNYEEFVQ 444
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 389 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 49/141 (34%)
Query: 5 VFRTFDA------------------------------------NGDGTIDFREFLCALSV 28
F FD +GDGTIDF EFL ++
Sbjct: 315 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 374
Query: 29 TSR-GKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTD 87
+ E+++R AF ++D DGNGYIS E+ ++ + E ++ D
Sbjct: 375 KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL------------GEKLTDEEVD 422
Query: 88 KIFRQMDKNQDGRLSLEEFIE 108
++ R+ D + DG+++ EEF++
Sbjct: 423 EMIREADIDGDGQVNYEEFVQ 443
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 388 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 14/97 (14%)
Query: 10 DANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
D + GTID+ EF+ A ++ + E+ L AFS +D DG+GYI+ +E
Sbjct: 56 DIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDE------------ 103
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+ + +D + D + +++D++ DG++ EF
Sbjct: 104 --IQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEF 138
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 49/142 (34%)
Query: 4 HVFRTFDANGD------------------------------------GTIDFREFLCALS 27
F FD +GD GTIDF EFL ++
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 73
Query: 28 VTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRT 86
+ E+KL+ AF ++D DGNG+IS E+ ++ + E ++
Sbjct: 74 RKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLG------------EKLTDEEV 121
Query: 87 DKIFRQMDKNQDGRLSLEEFIE 108
D++ R+ D + DG+++ EEF++
Sbjct: 122 DEMIREADVDGDGQVNYEEFVQ 143
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 87 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMM 146
Query: 64 A 64
A
Sbjct: 147 A 147
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 34 LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQM 93
++Q+LR AF +YD +GNGYIS + M EI+ + DE+ + D + ++
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAEL------------DETLSSEDLDAMIDEI 48
Query: 94 DKNQDGRLSLEEFI 107
D + G + EEF+
Sbjct: 49 DADGSGTVDFEEFM 62
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 9 FDANGDGTIDFREFLCALS 27
DA+G GT+DF EF+ ++
Sbjct: 48 IDADGSGTVDFEEFMGVMT 66
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 30 SRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKI 89
S+GK E++L F M+D + +GYI E+ ++QA E+ E +++
Sbjct: 9 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG------------ETITEDDIEEL 56
Query: 90 FRQMDKNQDGRLSLEEFIEGAKS 112
+ DKN DGR+ +EF+E K
Sbjct: 57 MKDGDKNNDGRIDYDEFLEFMKG 79
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
+FR FD N DG ID E L T E + D + +G I +E LE ++
Sbjct: 20 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79
Query: 65 I 65
+
Sbjct: 80 V 80
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Query: 30 SRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKI 89
S+GK E++L F M+D + +GYI E+ ++QA E+ E +++
Sbjct: 4 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG------------ETITEDDIEEL 51
Query: 90 FRQMDKNQDGRLSLEEFIE 108
+ DKN DGR+ +EF+E
Sbjct: 52 MKDGDKNNDGRIDYDEFLE 70
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
+FR FD N DG ID E L T E + D + +G I +E LE ++
Sbjct: 15 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 74
Query: 65 I 65
+
Sbjct: 75 V 75
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 16/108 (14%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKL-RWAFSMYDLDGNGYISRNEMLEI 61
V R D+N G I + +FL A ++ + L++++ F +D+DGNG IS
Sbjct: 96 HQVLRDIDSNASGQIHYTDFLAA-TIDKQTYLKKEVCLIPFKFFDIDGNGKIS------- 147
Query: 62 VQAIYKMVGTVMKMPEDESTP--EKRTDKIFRQMDKNQDGRLSLEEFI 107
V+ + ++ G +D P +K D + +++D N DG + EF+
Sbjct: 148 VEELKRIFGR-----DDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFM 190
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 5 VFRTFDANGDGTIDFREFLCALS 27
+ + D NGDG IDF EF+ +S
Sbjct: 172 LLQEVDLNGDGEIDFHEFMLMMS 194
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMD 94
E+++R AF ++D DGNGYIS E+ ++ + E ++ D++ R+ D
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNL------------GEKLTDEEVDEMIREAD 51
Query: 95 KNQDGRLSLEEFIE 108
+ DG+++ EEF++
Sbjct: 52 IDGDGQVNYEEFVQ 65
Score = 28.9 bits (63), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 10 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 69
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMD 94
E+++R AF ++D DGNGYIS E+ ++ + E ++ D++ R+ D
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNL------------GEKLTDEEVDEMIREAD 52
Query: 95 KNQDGRLSLEEFIE 108
+ DG+++ EEF++
Sbjct: 53 IDGDGQVNYEEFVQ 66
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 11 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 70
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMD 94
E+++R AF ++D DGNGYIS E+ ++ + E ++ D++ R+ D
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNL------------GEKLTDEEVDEMIREAD 48
Query: 95 KNQDGRLSLEEFIE 108
+ DG+++ EEF++
Sbjct: 49 IDGDGQVNYEEFVQ 62
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 7 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 66
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMD 94
E+++R AF ++D DGNGYIS E+ ++ + E ++ D++ R+ D
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNL------------GEKLTDEEVDEMIREAD 54
Query: 95 KNQDGRLSLEEFIE 108
+ DG+++ EEF++
Sbjct: 55 IDGDGQVNYEEFVQ 68
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 13 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 72
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMD 94
E+++R AF ++D DGNGYIS E+ ++ + E ++ D++ R+ D
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNL------------GEKLTDEEVDEMIREAD 55
Query: 95 KNQDGRLSLEEFIE 108
+ DG+++ EEF++
Sbjct: 56 IDGDGQVNYEEFVQ 69
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 14 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 73
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMD 94
E+++R AF ++D DGNGYIS E+ ++ + E ++ D++ R+ D
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNL------------GEKLTDEEVDEMIREAD 51
Query: 95 KNQDGRLSLEEFIE 108
+ DG+++ EEF++
Sbjct: 52 IDGDGQVNYEEFVQ 65
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
Query: 12 NGDGTIDFREFLCALSVTSR-GKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVG 70
N +G ++F EF ++ R E+++R AF ++D DG+G+IS E+ + M+
Sbjct: 58 NNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELR------FVMIN 111
Query: 71 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
K+ ++E D++ R+ D + DG ++ EEF+
Sbjct: 112 LGEKVTDEE------IDEMIREADFDGDGMINYEEFV 142
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 49/142 (34%)
Query: 4 HVFRTFDANGD------------------------------------GTIDFREFLCALS 27
F FD +GD GTIDF EFL ++
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 70
Query: 28 VTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRT 86
+ E++L+ AF ++D DGNG+IS E+ ++ + E ++
Sbjct: 71 RKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG------------EKLTDEEV 118
Query: 87 DKIFRQMDKNQDGRLSLEEFIE 108
D++ R+ D + DG+++ EEF++
Sbjct: 119 DEMIREADVDGDGQVNYEEFVQ 140
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 84 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMM 143
Query: 64 A 64
A
Sbjct: 144 A 144
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 49/142 (34%)
Query: 4 HVFRTFDANGD------------------------------------GTIDFREFLCALS 27
F FD +GD GTIDF EFL ++
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 73
Query: 28 VTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRT 86
+ E++L+ AF ++D DGNG+IS E+ ++ + E ++
Sbjct: 74 RKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG------------EKLTDEEV 121
Query: 87 DKIFRQMDKNQDGRLSLEEFIE 108
D++ R+ D + DG+++ EEF++
Sbjct: 122 DEMIREADVDGDGQVNYEEFVQ 143
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD +G+G I E ++ ++++ D+DG+G ++ E ++++
Sbjct: 87 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMM 146
Query: 64 A 64
A
Sbjct: 147 A 147
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKL-EQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F+ FDANGDG IDF EF + L + ++ A D DGNG I E ++++
Sbjct: 12 RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 71
Query: 63 Q 63
+
Sbjct: 72 K 72
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEI 61
+H+ ++ D + +G I++ EF+ ++L AF +D DG+G I+ E+
Sbjct: 363 VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL--- 419
Query: 62 VQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
G + + E ++ ++ ++ DKN DG + EEF+E
Sbjct: 420 --------GRLFGVTE---VDDETWHQVLQECDKNNDGEVDFEEFVE 455
Score = 32.0 bits (71), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAK 111
++ QA +G+ + E+ K +IFRQ+D N DG+L +E IEG +
Sbjct: 294 KLAQAAMLFMGSKLTTLEET----KELTQIFRQLDNNGDGQLDRKELIEGYR 341
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEI 61
+H+ ++ D + +G I++ EF+ ++L AF +D DG+G I+ E+
Sbjct: 89 VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL--- 145
Query: 62 VQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
G + + E ++ ++ ++ DKN DG + EEF+E
Sbjct: 146 --------GRLFGVTE---VDDETWHQVLQECDKNNDGEVDFEEFVE 181
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAK 111
++ QA +G+ + E+ K +IFRQ+D N DG+L +E IEG +
Sbjct: 20 KLAQAAMLFMGSKLTTLEET----KELTQIFRQLDNNGDGQLDRKELIEGYR 67
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 30 SRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKI 89
+R LE L+ AF +D DG+G+I+ +E+ M G +P++E D +
Sbjct: 1 ARAGLE-DLQVAFRAFDQDGDGHITVDELRR------AMAGLGQPLPQEE------LDAM 47
Query: 90 FRQMDKNQDGRLSLEEF 106
R+ D +QDGR++ EEF
Sbjct: 48 IREADVDQDGRVNYEEF 64
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNE 57
FR FD +GDG I E A++ + +++L D+D +G ++ E
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEE 63
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 32 GKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFR 91
GK E++L F M+D + +GYI +E+ ++QA E+ E +++ +
Sbjct: 2 GKSEEELSDLFRMFDKNADGYIDLDELKIMLQATG------------ETITEDDIEELMK 49
Query: 92 QMDKNQDGRLSLEEFIEGAKS 112
DKN DGR+ +EF+E K
Sbjct: 50 DGDKNNDGRIDYDEFLEFMKG 70
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
+FR FD N DG ID E L T E + D + +G I +E LE ++
Sbjct: 11 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 70
Query: 65 I 65
+
Sbjct: 71 V 71
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 31 RGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIF 90
+GK E++L F M+D + +GYI E+ ++QA E+ E +++
Sbjct: 2 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT------------GETITEDDIEELM 49
Query: 91 RQMDKNQDGRLSLEEFIE 108
+ DKN DGR+ +EF+E
Sbjct: 50 KDGDKNNDGRIDYDEFLE 67
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
+FR FD N DG ID E L T E + D + +G I +E LE ++
Sbjct: 12 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 71
Query: 65 I 65
+
Sbjct: 72 V 72
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 12/74 (16%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMD 94
E+++R AF + D DGNGYIS E+ ++ + E ++ D++ R+ D
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNL------------GEKLTDEEVDEMIREAD 75
Query: 95 KNQDGRLSLEEFIE 108
+ DG+++ EEF++
Sbjct: 76 IDGDGQVNYEEFVQ 89
Score = 25.4 bits (54), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR D +G+G I E ++ ++++ D+DG+G ++ E ++++ A
Sbjct: 34 AFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 29/127 (22%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALS-------------------VTSRGKLEQKLRWA 41
+ + F + G+ ++FR F+ L+ + SR KL +A
Sbjct: 62 LGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRS---NKLHFA 118
Query: 42 FSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRL 101
F +YDLD + ISR+E+L++++ MVG + + S D+ ++ D++ D +
Sbjct: 119 FRLYDLDKDDKISRDELLQVLRM---MVGVNISDEQLGSI----ADRTIQEADQDGDSAI 171
Query: 102 SLEEFIE 108
S EF++
Sbjct: 172 SFTEFVK 178
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEI 61
AE V R +D NG GT+D EFL AL E + AF+ D G+G ++ +++
Sbjct: 75 AEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDL--- 131
Query: 62 VQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQ-DGRLSLEEF 106
+ +Y K+ E T ++ + D ++ DG+++L EF
Sbjct: 132 -RGVYSGRAHP-KVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEF 175
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDK 95
Q L F D DG+ + +E Q + K+ G V+ E E + R+ D+
Sbjct: 37 QGLARFFRQLDRDGSRSLDADE---FRQGLAKL-GLVLDQAEAEG--------VCRKWDR 84
Query: 96 NQDGRLSLEEFIEGAKSDPSIVR 118
N G L LEEF+ + S R
Sbjct: 85 NGSGTLDLEEFLRALRPPMSQAR 107
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMD 94
E+++R AF ++D DGNGYIS ++ ++ + E ++ D++ R+ D
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNL------------GEKLTDEEVDEMIREAD 53
Query: 95 KNQDGRLSLEEFIE 108
+ DG+++ E+F++
Sbjct: 54 IDGDGQVNYEDFVQ 67
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
E +F+ FD NGDG I E AL T ++R + D DG+G+IS +E +
Sbjct: 14 ERIFKRFDTNGDGKISSSELGDALK-TLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFA 72
Query: 63 QAIYKMVGTVMKM 75
+A +V V K+
Sbjct: 73 RANRGLVKDVSKI 85
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 79 ESTPEKRTDK--IFRQMDKNQDGRLSLEEFIEGAKSDPSIV 117
E TP+ D+ IF++ D N DG++S E + K+ S+
Sbjct: 4 EDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVT 44
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 20/76 (26%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMK----MPEDESTPEKRTDKIFR 91
+++R AF ++D DGNG+IS+ E+ GT M+ MP E + I +
Sbjct: 36 EEIREAFKVFDRDGNGFISKQEL-----------GTAMRSLGYMPN-----EVELEVIIQ 79
Query: 92 QMDKNQDGRLSLEEFI 107
++D + DG++ EEF+
Sbjct: 80 RLDMDGDGQVDFEEFV 95
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 6 FRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F+ FD +G+G I +E A+ E +L D+DG+G + E + ++
Sbjct: 42 FKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALS 27
E + + D +GDG +DF EF+ L
Sbjct: 75 EVIIQRLDMDGDGQVDFEEFVTLLG 99
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 30 SRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKI 89
++GK E++L F ++D + +G+I E+ EI++A E E+ + +
Sbjct: 4 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG------------EHVIEEDIEDL 51
Query: 90 FRQMDKNQDGRLSLEEFI 107
+ DKN DGR+ +EF+
Sbjct: 52 MKDSDKNNDGRIDFDEFL 69
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
+ FR FD N DG ID E L T +E+ + D + +G I +E L++++
Sbjct: 14 NCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME 73
Query: 64 AI 65
+
Sbjct: 74 GV 75
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDK 95
++LR AF +D +G+G IS +E+ E A+ K++G + ++I R +D
Sbjct: 7 KELRDAFREFDTNGDGEISTSELRE---AMRKLLG--------HQVGHRDIEEIIRDVDL 55
Query: 96 NQDGRLSLEEFI 107
N DGR+ EEF+
Sbjct: 56 NGDGRVDFEEFV 67
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALS 27
E + R D NGDG +DF EF+ +S
Sbjct: 47 EEIIRDVDLNGDGRVDFEEFVRMMS 71
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 9 FDANGDGTIDFREFL-----CALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
+ N G +DF +F+ L+ T+ ++LR AF +D +G+G IS +E+ E
Sbjct: 56 INMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELRE--- 112
Query: 64 AIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
A+ K++G + ++I R +D N DGR+ EEF+
Sbjct: 113 AMRKLLG--------HQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALS 27
E + R D NGDG +DF EF+ +S
Sbjct: 128 EEIIRDVDLNGDGRVDFEEFVRMMS 152
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD + DG I+ R+ + E +L +++ G++ ++ +E++
Sbjct: 16 AFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGP 75
Query: 65 IYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAK 111
K++ M K FR+ D N DG +S E E +
Sbjct: 76 --KLLAETADM-----IGVKELRDAFREFDTNGDGEISTSELREAMR 115
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 9 FDANGDGTIDFREFL-----CALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
+ N G +DF +F+ L+ T+ ++LR AF +D +G+G IS +E+ E
Sbjct: 70 INMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELRE--- 126
Query: 64 AIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
A+ K++G + ++I R +D N DGR+ EEF+
Sbjct: 127 AMRKLLG--------HQVGHRDIEEIIRDVDLNGDGRVDFEEFV 162
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALS 27
E + R D NGDG +DF EF+ +S
Sbjct: 142 EEIIRDVDLNGDGRVDFEEFVRMMS 166
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD + DG I+ R+ + E +L +++ G++ ++ +E++
Sbjct: 30 AFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGP 89
Query: 65 IYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAK 111
K++ M K FR+ D N DG +S E E +
Sbjct: 90 --KLLAETADM-----IGVKELRDAFREFDTNGDGEISTSELREAMR 129
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 FAEHVFRTFDAN-GDGTIDFREFLCALSVTS-RGKLEQKLRWAFSMYDLDGNGYISRNEM 58
F E + R F + ++ F +FL LSV S + K +AF ++D D +G ++R ++
Sbjct: 92 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDL 151
Query: 59 LEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+V + G S ++ D I + D ++DG ++L EF
Sbjct: 152 SRLVNC---LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 196
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 29/127 (22%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALS-------------------VTSRGKLEQKLRWA 41
+ + F G+ ++FR F+ L+ + SR KL +A
Sbjct: 62 LGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRS---NKLHFA 118
Query: 42 FSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRL 101
F +YDLD + ISR+E+L++++ MVG + + S D+ ++ D++ D +
Sbjct: 119 FRLYDLDKDEKISRDELLQVLRM---MVGVNISDEQLGSI----ADRTIQEADQDGDSAI 171
Query: 102 SLEEFIE 108
S EF++
Sbjct: 172 SFTEFVK 178
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLE--------QKLRWAFSMYDLDGNGY 52
+ + + + FD+N DG ++ E L V L+ ++ AF +YD DGNGY
Sbjct: 148 YTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGY 207
Query: 53 ISRNEM 58
I NE+
Sbjct: 208 IDENEL 213
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 YDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLE 104
YD D +G+I E+ ++ + + + D++ + TD + + D N DG+L L
Sbjct: 112 YDTDHSGFIETEELKNFLKDLLEKANKTV----DDTKLAEYTDLMLKLFDSNNDGKLELT 167
Query: 105 E 105
E
Sbjct: 168 E 168
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 45 YDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLE 104
+D DG+GY+ E+ ++Q + + K E +PE +T Q + DG++ +
Sbjct: 25 FDADGSGYLEGKELQNLIQELLQ----ARKKAGLELSPEMKT--FVDQYGQRDDGKIGIV 78
Query: 105 EFIEGAKSDPSIVRLLQC 122
E ++ + + L +C
Sbjct: 79 ELAHVLPTEENFLLLFRC 96
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 FAEHVFRTFDAN-GDGTIDFREFLCALSVTS-RGKLEQKLRWAFSMYDLDGNGYISRNEM 58
F E + R F + ++ F +FL LSV S + K +AF ++D D +G ++R ++
Sbjct: 61 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDL 120
Query: 59 LEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+V + G S ++ D I + D ++DG ++L EF
Sbjct: 121 SRLVNC---LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 165
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AF M+D DG G IS E+ GTVM+M T E+ D I ++D++
Sbjct: 21 EFKAAFDMFDADGGGDISTKEL-----------GTVMRMLGQNPTKEE-LDAIIEEVDED 68
Query: 97 QDGRLSLEEFI 107
G + EEF+
Sbjct: 69 GSGTIDFEEFL 79
Score = 28.5 bits (62), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEML 59
F FDA+G G I +E + + + +++L D DG+G I E L
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 9 FDANGDGTIDFREFLCALSVT--SRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIY 66
D +G GTIDF EFL ++ R E+ L+ AF ++D D +G I+ ++ ++ +
Sbjct: 73 IDKDGSGTIDFEEFLTMMTAKMGERDSREEILK-AFRLFDDDNSGTIT----IKDLRRVA 127
Query: 67 KMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
K +G E+ E+ ++ + D+N D + +EFI
Sbjct: 128 KELG--------ENLTEEELQEMIAEADRNDDNEIDEDEFI 160
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
F FD +G GTID +E A+ +++++ S D DG+G I E L ++
Sbjct: 32 EAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMT 91
Query: 64 AIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAK 111
A KM E +S E K FR D + G +++++ AK
Sbjct: 92 A---------KMGERDSREE--ILKAFRLFDDDNSGTITIKDLRRVAK 128
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDK 95
Q++R AF ++D DG+G I E+ + + +G K E K+ ++DK
Sbjct: 28 QEIREAFDLFDTDGSGTIDAKEL----KVAMRALGFEPKKEE--------IKKMISEIDK 75
Query: 96 NQDGRLSLEEFI 107
+ G + EEF+
Sbjct: 76 DGSGTIDFEEFL 87
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AF M+D DG G IS E+ GTVM+M T E+ D I ++D++
Sbjct: 10 EFKAAFDMFDADGGGDISTKEL-----------GTVMRMLGQNPTKEE-LDAIIEEVDED 57
Query: 97 QDGRLSLEEFI 107
G + EEF+
Sbjct: 58 GSGTIDFEEFL 68
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEML 59
F FDA+G G I +E + + + +++L D DG+G I E L
Sbjct: 14 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 68
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 9 FDANGDGTIDFREFL-----CALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
+ N G +DF +F+ L+ T+ ++LR AF +D +G+G IS +E+ E ++
Sbjct: 56 INMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMR 115
Query: 64 AIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
A+ + ++I R +D N DGR+ EEF+
Sbjct: 116 ALLG-----------HQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALS 27
E + R D NGDG +DF EF+ +S
Sbjct: 128 EEIIRDVDLNGDGRVDFEEFVRMMS 152
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD + DG I+ R+ + E +L +++ G++ ++ +E++
Sbjct: 16 AFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGP 75
Query: 65 IYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 112
K++ M K FR+ D N DG +S E E ++
Sbjct: 76 --KLLAETADM-----IGVKELRDAFREFDTNGDGEISTSELREAMRA 116
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 5 VFRTFDANGDGTI---DFREFLCALSVTSRGK--LEQKLRWAFSMYDLDGNGYISRNEML 59
FR FD NGDG I + RE + AL G +E+ +R DL+G+G + E +
Sbjct: 93 AFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDV----DLNGDGRVDFEEFV 148
Query: 60 EIV 62
++
Sbjct: 149 RMM 151
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
E +F+ FD NGDG I E AL ++ R + D DG+G+I NE +
Sbjct: 5 ERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRM-MAEIDTDGDGFIDFNEFISFC 63
Query: 63 QAIYKMVGTVMKM 75
A ++ V K+
Sbjct: 64 NANPGLMKDVAKV 76
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 87 DKIFRQMDKNQDGRLSLEEFIEGAKS 112
++IF++ D N DG++SL E + ++
Sbjct: 5 ERIFKRFDTNGDGKISLSELTDALRT 30
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AF M+D DG G IS K +GTVM+M T E+ D I ++D++
Sbjct: 21 EFKAAFDMFDADGGGDIS-----------TKALGTVMRMLGQNPTKEE-LDAIIEEVDED 68
Query: 97 QDGRLSLEEFI 107
G + EEF+
Sbjct: 69 GSGTIDFEEFL 79
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 3 EHVFRTFDANGDGTIDFREFLCAL 26
+ + D +G GTIDF EFL +
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMM 82
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEML 59
F FDA+G G I + + + + +++L D DG+G I E L
Sbjct: 25 AFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
E +F+ FD NGDG I E AL ++ R + D DG+G+I NE +
Sbjct: 6 ERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRM-MAEIDTDGDGFIDFNEFISFC 64
Query: 63 QAIYKMVGTVMKM 75
A ++ V K+
Sbjct: 65 NANPGLMKDVAKV 77
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 87 DKIFRQMDKNQDGRLSLEEFIEGAKS 112
++IF++ D N DG++SL E + ++
Sbjct: 6 ERIFKRFDTNGDGKISLSELTDALRT 31
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEI 61
+++ + D + +G I++ EF+ E++LR AF+++D D +G I++ E+ +
Sbjct: 401 VDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANL 460
Query: 62 VQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
S EK + + + D+N+D + +EF+
Sbjct: 461 FGLT--------------SISEKTWNDVLGEADQNKDNMIDFDEFV 492
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 20/110 (18%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGK--------LEQKLRWAFSMYDLDGNGYISRN 56
+F+ D NGDG +D +E + +V K +E+++ D D NGYI +
Sbjct: 360 IFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYS 419
Query: 57 EMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
E + + M + E+R + F D ++ G+++ EE
Sbjct: 420 EFISVC------------MDKQILFSEERLRRAFNLFDTDKSGKITKEEL 457
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 109
++ QA +G+ + E+ K IF+++DKN DG+L +E IEG
Sbjct: 335 KLAQAAILFIGSKLTTLEER----KELTDIFKKLDKNGDGQLDKKELIEG 380
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
F FD +G GTID +E A+ +++++ + D DG+G I E L+++
Sbjct: 12 EAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMT 71
Query: 64 AIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSL 103
A KM E +S E K FR D ++ G++S
Sbjct: 72 A---------KMGERDSREE--IMKAFRLFDDDETGKISF 100
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 15/99 (15%)
Query: 10 DANGDGTIDFREFLCALSVT--SRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYK 67
D +G GTIDF EFL ++ R E+ ++ AF ++D D G IS + ++ + K
Sbjct: 54 DKDGSGTIDFEEFLQMMTAKMGERDSREEIMK-AFRLFDDDETGKIS----FKNLKRVAK 108
Query: 68 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+G M DE E + + D++ DG ++ EEF
Sbjct: 109 ELGENMT---DEELQE-----MIDEADRDGDGEVNEEEF 139
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDK 95
Q++R AF ++D DG+G I E+ + + +G K E K+ +DK
Sbjct: 8 QEIREAFDLFDTDGSGTIDAKEL----KVAMRALGFEPKKEE--------IKKMIADIDK 55
Query: 96 NQDGRLSLEEFIE 108
+ G + EEF++
Sbjct: 56 DGSGTIDFEEFLQ 68
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
FR FD + G I F+ +++L+ D DG+G ++ E I++
Sbjct: 85 KAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIMK 144
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 12/73 (16%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMD 94
E++L AF ++D DGNG IS E+ ++ + + K+ +DE D++ R+ D
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGE------KLTDDE------VDEMIREAD 54
Query: 95 KNQDGRLSLEEFI 107
+ DG ++ EEF+
Sbjct: 55 IDGDGHINYEEFV 67
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCAL----SVTSRGKLEQKLRWAFSMYDLDGNGYISRNE 57
+ V D + +G I++ EF+ ++ SR +LE+ AF M+D D +G IS E
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLER----AFRMFDSDNSGKISSTE 439
Query: 58 MLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+ T+ + + +S K + ++DKN DG + +EF
Sbjct: 440 L-----------ATIFGVSDVDSETWK---SVLSEVDKNNDGEVDFDEF 474
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 23/113 (20%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGK-----------LEQKLRWAFSMYDLDGNGYI 53
+F D NGDG +D E + R K +E ++ D D NGYI
Sbjct: 340 IFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYI 399
Query: 54 SRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+E + + M +R ++ FR D + G++S E
Sbjct: 400 EYSEFVTVA------------MDRKTLLSRERLERAFRMFDSDNSGKISSTEL 440
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAK 111
++ QA +G+ + +DE+ K IF +MDKN DG+L E IEG K
Sbjct: 315 KLAQAALLYMGSKL-TSQDET---KELTAIFHKMDKNGDGQLDRAELIEGYK 362
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 12/73 (16%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMD 94
E++L+ AF ++D D NG+IS E+ ++ + E ++ D++ R+ D
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNL------------GEKLTDEEVDEMIREAD 50
Query: 95 KNQDGRLSLEEFI 107
+ DG+++ EEF+
Sbjct: 51 VDGDGQINYEEFV 63
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
FR FD + +G I E ++ ++++ D+DG+G I+ E ++++ A
Sbjct: 9 AFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 68
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCAL----SVTSRGKLEQKLRWAFSMYDLDGNGYISRNE 57
+ V D + +G I++ EF+ ++ SR +LE+ AF M+D D +G IS E
Sbjct: 407 VDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLER----AFRMFDSDNSGKISSTE 462
Query: 58 MLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+ T+ + + +S K + ++DKN DG + +EF
Sbjct: 463 L-----------ATIFGVSDVDSETWK---SVLSEVDKNNDGEVDFDEF 497
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 23/113 (20%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGK-----------LEQKLRWAFSMYDLDGNGYI 53
+F D NGDG +D E + R K +E ++ D D NGYI
Sbjct: 363 IFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYI 422
Query: 54 SRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+E + + M +R ++ FR D + G++S E
Sbjct: 423 EYSEFVTVA------------MDRKTLLSRERLERAFRMFDSDNSGKISSTEL 463
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAK 111
++ QA +G+ + +DE+ K IF +MDKN DG+L E IEG K
Sbjct: 338 KLAQAALLYMGSKL-TSQDET---KELTAIFHKMDKNGDGQLDRAELIEGYK 385
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
+ D +G+ I+F EFL +S + EQ+L AF ++D +G+G IS E+ ++
Sbjct: 51 LMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLT 110
Query: 64 AI 65
+I
Sbjct: 111 SI 112
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
F FD + +G+I E + E ++ + D+DGN I +E L ++
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74
Query: 65 IYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
K + E+ + F+ DKN DG +S E
Sbjct: 75 QLK-----------SNDSEQELLEAFKVFDKNGDGLISAAEL 105
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
E +F+ FDANGDG I E AL T +++ + D DG+G+IS E +
Sbjct: 12 ERIFKRFDANGDGKISAAELGEALK-TLGSITPDEVKHMMAEIDTDGDGFISFQEFTDFG 70
Query: 63 QAIYKMVGTVMKM 75
+A ++ V K+
Sbjct: 71 RANRGLLKDVAKI 83
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 76 PEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIV 117
P+D++ E+ IF++ D N DG++S E E K+ SI
Sbjct: 5 PQDKAERER----IFKRFDANGDGKISAAELGEALKTLGSIT 42
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCAL----SVTSRGKLEQKLRWAFSMYDLDGNGYISRNE 57
+ V D + +G I++ EF+ ++ SR +LE+ AF M+D D +G IS E
Sbjct: 408 VDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLER----AFRMFDSDNSGKISSTE 463
Query: 58 MLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+ T+ + + +S K + ++DKN DG + +EF
Sbjct: 464 L-----------ATIFGVSDVDSETWK---SVLSEVDKNNDGEVDFDEF 498
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 23/113 (20%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGK-----------LEQKLRWAFSMYDLDGNGYI 53
+F D NGDG +D E + R K +E ++ D D NGYI
Sbjct: 364 IFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYI 423
Query: 54 SRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+E + + M +R ++ FR D + G++S E
Sbjct: 424 EYSEFVTVA------------MDRKTLLSRERLERAFRMFDSDNSGKISSTEL 464
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAK 111
++ QA +G+ + +DE+ K IF +MDKN DG+L E IEG K
Sbjct: 339 KLAQAALLYMGSKL-TSQDET---KELTAIFHKMDKNGDGQLDRAELIEGYK 386
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 12/80 (15%)
Query: 33 KLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQ 92
K E++L F M+D + +GYI E+ ++QA E+ E +++ +
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEELKIMLQAT------------GETITEDDIEELMKD 49
Query: 93 MDKNQDGRLSLEEFIEGAKS 112
DKN DGR+ +EF+E K
Sbjct: 50 GDKNNDGRIDYDEFLEFMKG 69
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
+FR FD N DG ID E L T E + D + +G I +E LE ++
Sbjct: 10 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 69
Query: 65 I 65
+
Sbjct: 70 V 70
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
+ D +G+ I+F EFL +S + EQ+L AF ++D +G+G IS E+ ++
Sbjct: 51 LMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLT 110
Query: 64 AI 65
+I
Sbjct: 111 SI 112
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQA 64
F FD + +G+I E + E ++ + D+DGN I +E L ++
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74
Query: 65 IYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
K + E+ + F+ DKN DG +S E
Sbjct: 75 QLK-----------SNDSEQELLEAFKVFDKNGDGLISAAEL 105
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSR-GKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
+ D +G+ I+F EFL +S + EQ+L AF ++D +G+G IS E+ ++
Sbjct: 52 LMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLT 111
Query: 64 AI 65
+I
Sbjct: 112 SI 113
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 11/103 (10%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
F FD + G+I E + E ++ + D+DGN I +E L ++
Sbjct: 15 EAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMS 74
Query: 64 AIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
K + E+ + F+ DKN DG +S E
Sbjct: 75 RQLKC-----------NDSEQELLEAFKVFDKNGDGLISAAEL 106
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 12/73 (16%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMD 94
E++L+ AF ++D D NGYIS +E+ + M+ K+ ++E +++ ++ D
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHV------MINLGEKLTDEE------VEQMIKEAD 50
Query: 95 KNQDGRLSLEEFI 107
+ DG+++ EEF+
Sbjct: 51 LDGDGQVNYEEFV 63
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 33 KLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQ 92
K++ +L AF D +G+GY++ E+ Q + + +D+ ++ + K+ +
Sbjct: 4 KVKAELEAAFKKLDANGDGYVTALEL----QTFMVTLDAYKALSKDK--VKEASAKLIKM 57
Query: 93 MDKNQDGRLSLEEFIEG 109
DKN DG++S EEF+
Sbjct: 58 ADKNSDGKISKEEFLNA 74
Score = 32.3 bits (72), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 3 EHVFRTFDANGDG---TIDFREFLCAL---SVTSRGKLEQKLRWAFSMYDLDGNGYISRN 56
E F+ DANGDG ++ + F+ L S+ K+++ M D + +G IS+
Sbjct: 10 EAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKE 69
Query: 57 EML 59
E L
Sbjct: 70 EFL 72
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 9 FDANGDGTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
D +G+ I+F EFL +S + EQ+L AF ++D +G+G IS E+ ++ +I
Sbjct: 56 IDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI 113
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 11/104 (10%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
+ F FD + +G+I E + E ++ + D+DGN I +E L ++
Sbjct: 14 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 73
Query: 63 QAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
K + E+ + F+ DKN DG +S E
Sbjct: 74 SRQLK-----------SNDSEQELLEAFKVFDKNGDGLISAAEL 106
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FD +GDG I E + + E++L+ S D DGNG I +E L ++
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/70 (20%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Query: 38 LRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQ 97
+ AF ++D DG+G I+ E+ +++++ D++ E+ + ++D +
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSL------------DQNPTEEELQDMISEVDADG 59
Query: 98 DGRLSLEEFI 107
+G + +EF+
Sbjct: 60 NGTIEFDEFL 69
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 10 DANGDGTIDFREFLCALS 27
DA+G+GTI+F EFL ++
Sbjct: 56 DADGNGTIEFDEFLSLMA 73
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FD +GDG I E + + E++L+ S D DGNG I +E L ++
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/70 (20%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Query: 38 LRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQ 97
+ AF ++D DG+G I+ E+ +++++ D++ E+ + ++D +
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSL------------DQNPTEEELQDMISEVDADG 59
Query: 98 DGRLSLEEFI 107
+G + +EF+
Sbjct: 60 NGTIEFDEFL 69
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 10 DANGDGTIDFREFLCALS 27
DA+G+GTI+F EFL ++
Sbjct: 56 DADGNGTIEFDEFLSLMA 73
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 12/73 (16%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMD 94
E++L+ AF ++D D NGYIS +E+ + M+ K+ ++E +++ ++ D
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHV------MINLGEKLTDEE------VEQMIKEAD 55
Query: 95 KNQDGRLSLEEFI 107
+ DG+++ EEF+
Sbjct: 56 LDGDGQVNYEEFV 68
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDES---TPEKRTDKIFR 91
E+++ F+ +D DGNG+I R++ +A+ G + ++ E +
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAG 62
Query: 92 QMDKNQDGRLSLEEFIEGA 110
D++ D R++ EEF+ GA
Sbjct: 63 IADRDGDQRITREEFVTGA 81
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 10 DANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEML 59
D +GDG + + A ++T+ G E R A + D DG+G + E++
Sbjct: 108 DTDGDGAVTVAD--TARALTAFGVPEDLARQAAAALDTDGDGKVGETEIV 155
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 20/110 (18%)
Query: 5 VFRTFDANGDGTIDFREFLCALS--------VTSRGKLEQKLRWAFSMYDLDGNGYISRN 56
+FR D NGDG +D +E + S V ++E ++ D D NGYI +
Sbjct: 351 IFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYS 410
Query: 57 EMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
E + + M + + + F++ D++ +G++S++E
Sbjct: 411 EFVTVA------------MDRKSLLSKDKLESAFQKFDQDGNGKISVDEL 448
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 74 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 109
K+ E T E TD IFR +DKN DG+L +E I+G
Sbjct: 338 KLTSQEETKE-LTD-IFRHIDKNGDGQLDRQELIDG 371
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 20/110 (18%)
Query: 5 VFRTFDANGDGTIDFREFLCALS--------VTSRGKLEQKLRWAFSMYDLDGNGYISRN 56
+FR D NGDG +D +E + S V ++E ++ D D NGYI +
Sbjct: 68 IFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYS 127
Query: 57 EMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
E + + M + + + F++ D++ +G++S++E
Sbjct: 128 EFVTVA------------MDRKSLLSKDKLESAFQKFDQDGNGKISVDEL 165
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 74 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 109
K+ E T E TD IFR +DKN DG+L +E I+G
Sbjct: 55 KLTSQEETKE-LTD-IFRHIDKNGDGQLDRQELIDG 88
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDES---TPEKRTDKIFR 91
E+++ F+ +D DGNG+I R++ +A+ G + ++ E +
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAG 62
Query: 92 QMDKNQDGRLSLEEFIEGA 110
D++ D R++ EEF+ GA
Sbjct: 63 IADRDGDQRITREEFVTGA 81
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 10 DANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEML 59
D +GDG + + A ++T+ G E R A + D DG+G + E++
Sbjct: 108 DTDGDGAVTVAD--TARALTAFGVPEDLARQAAAALDTDGDGKVGETEIV 155
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FD N G+ID+ E A+ + ++ + YD +GNGYI ++ L+I+
Sbjct: 12 AFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIM 69
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKL-EQKLRWAFSMYDLDGNGYISR 55
+F DA G+G I F EFL + + E LR AF +D +G GYI +
Sbjct: 46 EMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPK 98
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AF M+D DG G IS E+ GTVM+M T + D I ++D++
Sbjct: 21 EFKAAFDMFDADGGGDISTKEL-----------GTVMRMLGQNPT-KCELDAIICEVDED 68
Query: 97 QDGRLSLEEFI 107
G + EEF+
Sbjct: 69 GSGTIDFEEFL 79
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEML 59
F FDA+G G I +E + + + + +L D DG+G I E L
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFL 79
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FD +GDGTI +E + + E +L+ + D DGNG I E L ++
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AFS++D DG+G I+ E+ GTVM+ T + D I ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKEL-----------GTVMRSLGQNPTEAELQDMI-NEVDAD 58
Query: 97 QDGRLSLEEFI 107
+G + EF+
Sbjct: 59 GNGTIDFPEFL 69
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 10 DANGDGTIDFREFLCALS 27
DA+G+GTIDF EFL ++
Sbjct: 56 DADGNGTIDFPEFLTMMA 73
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FD +GDGTI +E + + E +L+ + D DGNG I E L ++
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AFS++D DG+G I+ E+ GTVM+ T + D I ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKEL-----------GTVMRSLGQNPTEAELQDMI-NEVDAD 58
Query: 97 QDGRLSLEEFI 107
+G + EF+
Sbjct: 59 GNGTIDFPEFL 69
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 10 DANGDGTIDFREFLCALS 27
DA+G+GTIDF EFL ++
Sbjct: 56 DADGNGTIDFPEFLTMMA 73
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FD +GDGTI +E + + E +L+ + D DGNG I E L ++
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AFS++D DG+G I+ E+ GTVM+ T + D I ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKEL-----------GTVMRSLGQNPTEAELQDMI-NEVDAD 58
Query: 97 QDGRLSLEEFI 107
+G + EF+
Sbjct: 59 GNGTIDFPEFL 69
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 10 DANGDGTIDFREFLCALS 27
DA+G+GTIDF EFL ++
Sbjct: 56 DADGNGTIDFPEFLTMMA 73
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 22/109 (20%)
Query: 2 AEHVFRTFDANGDGTIDFREFLCAL----SVTSRGKLEQKLRWAFSMYDLDGNGYISRNE 57
+ V D + +G I++ EF+ ++ SR +LE+ AF +D D +G IS E
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLER----AFRXFDSDNSGKISSTE 439
Query: 58 MLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+ T+ + + +S K + ++DKN DG + +EF
Sbjct: 440 L-----------ATIFGVSDVDSETWK---SVLSEVDKNNDGEVDFDEF 474
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 23/113 (20%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGK-----------LEQKLRWAFSMYDLDGNGYI 53
+F D NGDG +D E + R K +E ++ D D NGYI
Sbjct: 340 IFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFDKNGYI 399
Query: 54 SRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+E + + ++ +R ++ FR D + G++S E
Sbjct: 400 EYSEFVTVAXDRKTLL------------SRERLERAFRXFDSDNSGKISSTEL 440
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 84 KRTDKIFRQMDKNQDGRLSLEEFIEGAK 111
K IF + DKN DG+L E IEG K
Sbjct: 335 KELTAIFHKXDKNGDGQLDRAELIEGYK 362
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FD +GDGTI +E + + E +L+ + D DGNG I E L ++
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 10 DANGDGTIDFREFLCALSVTSRGK-LEQKLRWAF 42
DA+G+GTIDF EFL ++ + E+++R AF
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAF 89
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AFS++D DG+G I+ E+ GTVM+ T + D I ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKEL-----------GTVMRSLGQNPTEAELQDMI-NEVDAD 58
Query: 97 QDGRLSLEEFI 107
+G + EF+
Sbjct: 59 GNGTIDFPEFL 69
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FD +GDGTI +E + + E +L+ + D DGNG I E L ++
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AFS++D DG+G I+ E+ GTVM+ T + D I ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKEL-----------GTVMRSLGQNPTEAELQDMI-NEVDAD 58
Query: 97 QDGRLSLEEFI 107
+G + EF+
Sbjct: 59 GNGTIDFPEFL 69
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 10 DANGDGTIDFREFLCALS 27
DA+G+GTIDF EFL ++
Sbjct: 56 DADGNGTIDFPEFLTMMA 73
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FD +GDGTI +E + + E +L+ + D DGNG I E L ++
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AFS++D DG+G I+ E+ GTVM+ T + D I ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKEL-----------GTVMRSLGQNPTEAELQDMI-NEVDAD 58
Query: 97 QDGRLSLEEFI 107
+G + EF+
Sbjct: 59 GNGTIDFPEFL 69
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 10 DANGDGTIDFREFLCALS 27
DA+G+GTIDF EFL ++
Sbjct: 56 DADGNGTIDFPEFLTMMA 73
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
F FDA+G GTID +E A+ +++++ S D +G G ++ + L
Sbjct: 10 EAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL---- 65
Query: 64 AIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSL 103
TVM E ++ K F+ D ++ G++S
Sbjct: 66 -------TVMTQKMSEKDTKEEILKAFKLFDDDETGKISF 98
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FD +GDGTI +E + + E +L+ + D DGNG I E L ++
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AFS++D DG+G I+ E+ GTVM+ T + D I ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKEL-----------GTVMRSLGQNPTEAELQDMI-NEVDAD 58
Query: 97 QDGRLSLEEFI 107
+G + EF+
Sbjct: 59 GNGTIDFPEFL 69
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 10 DANGDGTIDFREFLCALS 27
DA+G+GTIDF EFL ++
Sbjct: 56 DADGNGTIDFPEFLTMMA 73
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FD +GDGTI +E + + E +L+ + D DGNG I E L ++
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AFS++D DG+G I+ E+ GTVM+ T + D I ++D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKEL-----------GTVMRSLGQNPTEAELQDMI-NEVDAD 59
Query: 97 QDGRLSLEEFI 107
+G + EF+
Sbjct: 60 GNGTIDFPEFL 70
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 10 DANGDGTIDFREFLCALS 27
DA+G+GTIDF EFL ++
Sbjct: 57 DADGNGTIDFPEFLTMMA 74
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
F FD +G GTID +E A+ +++++ S D DG+G I E L ++
Sbjct: 34 EAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMT 93
Query: 64 A 64
A
Sbjct: 94 A 94
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 14/74 (18%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEK-RTDKIFRQM 93
+Q++R AF ++D DG+G I E+ ++A+ P+K K+ ++
Sbjct: 29 KQEIREAFDLFDTDGSGTIDAKELKVAMRALG-------------FEPKKEEIKKMISEI 75
Query: 94 DKNQDGRLSLEEFI 107
DK+ G + EEF+
Sbjct: 76 DKDGSGTIDFEEFL 89
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
F +D +GDGTI +E + E +L+ + D DGNG I E L ++
Sbjct: 14 EAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 64 AIYK 67
I K
Sbjct: 74 RIMK 77
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 45 YDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLE 104
YD D +GYIS E+ ++ ++ + K+P ++ ++ TD + DKN+DGRL L
Sbjct: 113 YDADSSGYISAAELKNFLKDLF--LQHKKKIPPNKL--DEYTDAXXKIFDKNKDGRLDLN 168
Query: 105 EF 106
+
Sbjct: 169 DL 170
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 42 FSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEK--RTDKIFRQM-DKNQD 98
+ +D D NGYI E+ + + K + P+D+ T E+ + K F D D
Sbjct: 17 WQHFDADDNGYIEGKELDDFFRHXLKKL-----QPKDKITDERVQQIKKSFXSAYDATFD 71
Query: 99 GRLSLEEF 106
GRL +EE
Sbjct: 72 GRLQIEEL 79
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FD +GDGTI +E + + E +L+ + D DG+G I E L ++
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AFS++D DG+G I+ E+ GTVM+ T + D I ++D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKEL-----------GTVMRSLGQNPTEAELQDMI-NEVDAD 58
Query: 97 QDGRLSLEEFI 107
DG + EF+
Sbjct: 59 GDGTIDFPEFL 69
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 10 DANGDGTIDFREFLCALS 27
DA+GDGTIDF EFL ++
Sbjct: 56 DADGDGTIDFPEFLTMMA 73
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
+ F FD +GDG I +E + + E +L+ + D DGNG I E L ++
Sbjct: 13 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKN 96
+ + AFS++D DG+G I+ E+ GTVM+ T + D I ++D +
Sbjct: 11 EFKEAFSLFDKDGDGCITTKEL-----------GTVMRSLGQNPTEAELQDMI-NEVDAD 58
Query: 97 QDGRLSLEEFI 107
+G + EF+
Sbjct: 59 GNGTIDFPEFL 69
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 33.5 bits (75), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMK--MPEDESTPEKRTDKIFRQ 92
E +L + F M+D DGN + E+ + ++K G+ M EDE D + R
Sbjct: 49 ELQLHY-FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELI--NIIDGVLRD 105
Query: 93 MDKNQDGRLSLEEF 106
DKN DG + EF
Sbjct: 106 DDKNNDGYIDYAEF 119
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMK--MPEDESTPEKRTDKIFRQ 92
E +L + F M+D DGN + E+ + ++K G+ M EDE D + R
Sbjct: 18 ELQLHY-FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELI--NIIDGVLRD 74
Query: 93 MDKNQDGRLSLEEF 106
DKN DG + EF
Sbjct: 75 DDKNNDGYIDYAEF 88
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMK--MPEDESTPEKRTDKIFRQ 92
E +L + F M+D DGN + E+ + ++K G+ M EDE D + R
Sbjct: 68 ELQLHY-FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELI--NIIDGVLRD 124
Query: 93 MDKNQDGRLSLEEF 106
DKN DG + EF
Sbjct: 125 DDKNNDGYIDYAEF 138
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
F FDA+G GTID +E A+ +++++ S D +G G ++ + L ++
Sbjct: 35 EAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVM 93
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
+Q++R AF ++D DG G I E+ ++A+
Sbjct: 30 KQEIREAFDLFDADGTGTIDVKELKVAMRAL 60
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 10/54 (18%)
Query: 53 ISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+S+ E+ +++QA + +++K P + D +F+++DKN DG +S EEF
Sbjct: 26 LSKEELKQLIQAEFP---SLLKGP-------RTLDDLFQELDKNGDGEVSFEEF 69
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSR 31
+F+ D NGDG + F EF + S+
Sbjct: 52 LFQELDKNGDGEVSFEEFQVLVKKISQ 78
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 15 GTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
G ++F FL G E LR AFSM+D DG G+I + + ++++ +
Sbjct: 63 GQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENM 114
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 10 DANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
D N DG I+ EF L+ K E AF+ D +GNG +S +E+L V+
Sbjct: 112 DKNADGQINADEFAAWLTALGMSKAEAAE--AFNQVDTNGNGELSLDELLTAVR 163
Score = 28.5 bits (62), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRT---DKIFRQM 93
+L+ F +D DGNG + R + + Q I + G E ++ D + ++
Sbjct: 8 RLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEA 67
Query: 94 DKNQDGRLSLEEFI 107
DG L+ E+FI
Sbjct: 68 GVGSDGSLTEEQFI 81
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 2 AEHVFRTFDANGDGTIDFREFL-CALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
A+ VF FD N DG + EF AL+ + E +++ F D+DGNG ++ +E
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKF-FEEIDVDGNGELNADEFTS 61
Query: 61 IVQAI 65
++ +
Sbjct: 62 CIEKM 66
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 88 KIFRQMDKNQDGRLSLEEFIEGA 110
++F + DKN+DG+LSL+EF E A
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVA 27
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/92 (19%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 15 GTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMK 74
GT D++ F + + +GK + +++ F + D D +G+I E+ +++
Sbjct: 22 GTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFS-------- 71
Query: 75 MPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+ T + D + DG++ +EF
Sbjct: 72 -AHGRDLNDTETKALLAAGDSDHDGKIGADEF 102
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDK 95
++L+ F YD +G+G +S+ E+ ++Q + + M D++F ++DK
Sbjct: 5 EELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMST----------LDELFEELDK 54
Query: 96 NQDGRLSLEEF 106
N DG +S EEF
Sbjct: 55 NGDGEVSFEEF 65
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSR 31
+ +F D NGDG + F EF + S+
Sbjct: 46 DELFEELDKNGDGEVSFEEFQVLVKKISQ 74
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 16/71 (22%)
Query: 38 LRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQ 97
L+ + + D+DG+G +++ E V + +K G EK +++ + D N
Sbjct: 7 LKVLYKLMDVDGDGKLTKEE----VTSFFKKHGI-----------EKVAEQVMKA-DANG 50
Query: 98 DGRLSLEEFIE 108
DG ++LEEF+E
Sbjct: 51 DGYITLEEFLE 61
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
V T D+NGDG DF+EF+ +++ +
Sbjct: 57 VMETLDSNGDGECDFQEFMAFVAMITTA 84
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEM 58
+ + VF FD +G GTI E+ ++ E+ F DLD +G + +EM
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEM 171
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEI 61
F+ FD + G I + +++LR +DLDG+G I+ NE + I
Sbjct: 101 AFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEFIAI 157
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
++VFRT+D + G ID E ALS +Q +D G G I+ ++ ++
Sbjct: 77 QNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ-- 134
Query: 63 QAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDG--RLSLEEFIE 108
G ++ +R IFR+ D +QDG ++S E+++
Sbjct: 135 -------GCIVL---------QRLTDIFRRYDTDQDGWIQVSYEQYLS 166
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEI 61
F+ FD + G I + +++LR +DLDG+G I+ NE + I
Sbjct: 101 AFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAI 157
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 GDGTIDFREFLCA---LSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
G+ ++ F EFL A L +G + AF +D +G G+IS E+ ++ A+
Sbjct: 59 GEKSLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLTAL---- 113
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQD--GRLSLEEFIEGAKSDP 114
E ++ D+I + D +D G + E+F++ + P
Sbjct: 114 --------GERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP 152
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 GDGTIDFREFLCA---LSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
G+ ++ F EFL A L +G + AF +D +G G+IS E+ ++ A+
Sbjct: 59 GEKSLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLTAL---- 113
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQD--GRLSLEEFIEGAKSDP 114
E ++ D+I + D +D G + E+F++ + P
Sbjct: 114 --------GERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP 152
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 GDGTIDFREFLCA---LSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
G+ ++ F EFL A L +G + AF +D +G G+IS E+ ++ A+
Sbjct: 57 GEKSLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLTAL---- 111
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQD--GRLSLEEFIEGAKSDP 114
E ++ D+I + D +D G + E+F++ + P
Sbjct: 112 --------GERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP 150
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 GDGTIDFREFLCA---LSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
G+ ++ F EFL A L +G + AF +D +G G+IS E+ ++ A+
Sbjct: 56 GEKSLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLTAL---- 110
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQD--GRLSLEEFIEGAKSDP 114
E ++ D+I + D +D G + E+F++ + P
Sbjct: 111 --------GERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP 149
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 GDGTIDFREFLCA---LSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
G+ ++ F EFL A L +G + AF +D +G G+IS E+ ++ A+
Sbjct: 59 GEKSLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLTAL---- 113
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQD--GRLSLEEFIEGAKSDP 114
E ++ D+I + D +D G + E+F++ + P
Sbjct: 114 --------GERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP 152
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 13 GDGTIDFREFLCA---LSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
G+ ++ F EFL A L +G + AF +D +G G+IS E+ ++ A+
Sbjct: 56 GEKSLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLTAL---- 110
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQD--GRLSLEEFIEGAKSDP 114
E ++ D+I + D +D G + E+F++ + P
Sbjct: 111 --------GERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP 149
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 38 LRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQ 97
++ F M D D +G+I +E+ I++ P+ K T + DK+
Sbjct: 44 VKKVFHMLDKDKSGFIEEDELGFILKGFS---------PDARDLSAKETKMLMAAGDKDG 94
Query: 98 DGRLSLEEF 106
DG++ ++EF
Sbjct: 95 DGKIGVDEF 103
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGK-LEQK-LRWAFSMYDLDGNGYISRNEMLEIV 62
+ + D N G I + EF+ R K +E L+ AF+ D D +GYIS+++++ +V
Sbjct: 78 ILQALDINDRGNITYTEFMAG---CYRWKNIESTFLKAAFNKIDKDEDGYISKSDIVSLV 134
Query: 63 Q 63
Sbjct: 135 H 135
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
+ +F D N +G++ RE L+ S G + + D++ G I+ E
Sbjct: 40 YINELFYKLDTNHNGSLSHREIYTVLA--SVGIKKWDINRILQALDINDRGNITYTEF-- 95
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
M G + EST K F ++DK++DG +S + +
Sbjct: 96 -------MAGC-YRWKNIESTFLKAA---FNKIDKDEDGYISKSDIV 131
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 13 GDGTIDFREFLCA---LSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
G+ ++ F EFL A L +G + AF +D +G G+IS E+ ++ +
Sbjct: 59 GEKSLPFEEFLPAYEGLMDCEQGTFADYME-AFKTFDREGQGFISGAELRHVLSGL---- 113
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQD--GRLSLEEFIEGAKSDP 114
E ++ D+I D +D G + EEF++ + P
Sbjct: 114 --------GERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMAGP 152
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEM 58
+ + VF FD +G GTI E+ ++ ++ F DLD +G + +EM
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEM 171
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility
And Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel
Nucleotide Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever
Arm) With Reconstituted Complete Light Chains
Length = 156
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 7/43 (16%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPED 78
Q+++ AFSM D+D +G++S+ E ++AI + +G + P+D
Sbjct: 18 QEMKEAFSMIDVDRDGFVSK----EDIKAISEQLG---RAPDD 53
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEM 58
+ + VF FD +G GTI E+ ++ ++ F DLD +G + +EM
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEM 171
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEM 58
+ + VF FD +G GTI E+ ++ ++ F DLD +G + +EM
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEM 171
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
++ D + DG + EF L + K F+ D + NG ISR+E L V
Sbjct: 107 MYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTV 164
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 7/43 (16%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPED 78
Q+++ AFSM D+D +G++S+ E ++AI + +G + P+D
Sbjct: 7 QEMKEAFSMIDVDRDGFVSK----EDIKAISEQLG---RAPDD 42
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 87 DKIFRQMDKNQDGRLSLEEF 106
D++F ++DKN DG +S EEF
Sbjct: 47 DELFEELDKNGDGEVSFEEF 66
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSR 31
+ +F D NGDG + F EF + S+
Sbjct: 47 DELFEELDKNGDGEVSFEEFQVLVKKISQ 75
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 87 DKIFRQMDKNQDGRLSLEEF 106
D++F ++DKN DG +S EEF
Sbjct: 48 DELFEELDKNGDGEVSFEEF 67
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSR 31
+ +F D NGDG + F EF + S+
Sbjct: 48 DELFEELDKNGDGEVSFEEFQVLVKKISQ 76
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 6 FRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
+ D + DG + EF L + K F+ D + NG ISR+E L V
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTV 164
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 18/69 (26%)
Query: 42 FSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDK---IFRQMDKNQD 98
+ D D +GY+S E +QA+ P+ DK F +D N++
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAV---------------GPDLTDDKAITCFNTLDFNKN 152
Query: 99 GRLSLEEFI 107
G++S +EF+
Sbjct: 153 GQISRDEFL 161
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 87 DKIFRQMDKNQDGRLSLEEF 106
D++F ++DKN DG +S EEF
Sbjct: 47 DELFEELDKNGDGEVSFEEF 66
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSR 31
+ +F D NGDG + F EF + S+
Sbjct: 47 DELFEELDKNGDGEVSFEEFQVLVKKISQ 75
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 87 DKIFRQMDKNQDGRLSLEEF 106
D++F ++DKN DG +S EEF
Sbjct: 48 DELFEELDKNGDGEVSFEEF 67
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSR 31
+ +F D NGDG + F EF + S+
Sbjct: 48 DELFEELDKNGDGEVSFEEFQVLVKKISQ 76
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 87 DKIFRQMDKNQDGRLSLEEF 106
D++F ++DKN DG +S EEF
Sbjct: 47 DELFEELDKNGDGEVSFEEF 66
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSR 31
+ +F D NGDG + F EF + S+
Sbjct: 47 DELFEELDKNGDGEVSFEEFQVLVKKISQ 75
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%), Gaps = 7/44 (15%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
Q+++ AFSM D+D +G++S+ E ++AI + +G + P+D+
Sbjct: 6 QEMKEAFSMIDVDRDGFVSK----EDIKAISEQLG---RAPDDK 42
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 87 DKIFRQMDKNQDGRLSLEEF 106
D++F ++DKN DG +S EEF
Sbjct: 51 DELFEELDKNGDGEVSFEEF 70
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSR 31
+ +F D NGDG + F EF + S+
Sbjct: 51 DELFEELDKNGDGEVSFEEFQVLVKKISQ 79
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
V T D +GDG DF+EF+ +S+ +
Sbjct: 57 VMETLDEDGDGECDFQEFMAFVSMVTTA 84
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%), Gaps = 7/44 (15%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
Q+++ AFSM D+D +G++S+ E ++AI + +G + P+D+
Sbjct: 4 QEMKEAFSMIDVDRDGFVSK----EDIKAISEQLG---RAPDDK 40
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 87 DKIFRQMDKNQDGRLSLEEF 106
D++F ++DKN DG +S EEF
Sbjct: 48 DELFEELDKNGDGEVSFEEF 67
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSR 31
+ +F D NGDG + F EF + S+
Sbjct: 48 DELFEELDKNGDGEVSFEEFQVLVKKISQ 76
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 13 GDGTIDFREFLCA---LSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
G+ ++ F EFL A L +G + AF +D +G G+IS E+ ++ +
Sbjct: 60 GEKSLPFEEFLPAYEGLMDCEQGTYADYME-AFKTFDREGQGFISGAELRHVLSGL---- 114
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQD--GRLSLEEFIEGAKSDP 114
E ++ D+I D +D G + EEF++ + P
Sbjct: 115 --------GERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMTGP 153
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 87 DKIFRQMDKNQDGRLSLEEF 106
D++F ++DKN DG +S EEF
Sbjct: 47 DELFEELDKNGDGEVSFEEF 66
Score = 26.6 bits (57), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSR 31
+ +F D NGDG + F EF + S+
Sbjct: 47 DELFEELDKNGDGEVSFEEFQVLVKKISQ 75
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 13 GDGTIDFREFLCA---LSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMV 69
G+ ++ F EFL A L +G + AF +D +G G+IS E+ ++ +
Sbjct: 59 GEKSLPFEEFLPAYEGLMDCEQGTYADYME-AFKTFDREGQGFISGAELRHVLSGL---- 113
Query: 70 GTVMKMPEDESTPEKRTDKIFRQMDKNQD--GRLSLEEFIEGAKSDP 114
E ++ D+I D +D G + EEF++ + P
Sbjct: 114 --------GERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMTGP 152
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
V T D +GDG DF+EF+ +S+ +
Sbjct: 56 VMETLDEDGDGECDFQEFMAFVSMVTTA 83
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEM 58
+ + VF FD +G GTI E+ ++ ++ F DLD +G + +EM
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEM 171
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With
Mgadp:vanadate-Transition State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With
Mgadp:vanadate-Transition State
Length = 139
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%), Gaps = 7/44 (15%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
Q+++ AFSM D+D +G++S+ E ++AI + +G + P+D+
Sbjct: 7 QEMKEAFSMIDVDRDGFVSK----EDIKAISEQLG---RAPDDK 43
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
++VFRT+D + G ID E ALS +Q +D G G I+ ++ ++
Sbjct: 77 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ-- 134
Query: 63 QAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDG--RLSLEEFIE 108
G ++ +R IFR+ D +QDG ++S E+++
Sbjct: 135 -------GCIVL---------QRLTDIFRRYDTDQDGWIQVSYEQYLS 166
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 84 KRTDKIFRQMDKNQDGRLSLEEF--IEGAKSDPSIVRLLQCDPQ 125
K DK+ + +D N DGR+S +E+ + G + P I +L+ Q
Sbjct: 56 KAADKLIQNLDANHDGRISFDEYWTLIGGITGP-IAKLIHEQEQ 98
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 87 DKIFRQMDKNQDGRLSLEEF 106
D++F ++DKN DG +S EEF
Sbjct: 48 DELFEELDKNGDGEVSFEEF 67
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSR 31
+ +F D NGDG + F EF + S+
Sbjct: 48 DELFEELDKNGDGEVSFEEFQVLVKKISQ 76
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
++VFRT+D + G ID E ALS +Q +D G G I+ ++ ++
Sbjct: 96 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ-- 153
Query: 63 QAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDG--RLSLEEFIE 108
G ++ +R IFR+ D +QDG ++S E+++
Sbjct: 154 -------GCIVL---------QRLTDIFRRYDTDQDGWIQVSYEQYLS 185
>pdb|3NXA|A Chain A, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|B Chain B, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|C Chain C, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|D Chain D, X-Ray Structure Of The Apo Form Of Human S100a16
Length = 100
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 84 KRTDKIFRQMDKNQDGRLSLEEF--IEGAKSDPSIVRLLQCDPQ 125
K DK+ + +D N DGR+S +E+ + G + P I +L+ Q
Sbjct: 55 KAADKLIQNLDANHDGRISFDEYWTLIGGITGP-IAKLIHEQEQ 97
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
++VFRT+D + G ID E ALS +Q +D G G I+ ++ ++
Sbjct: 95 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ-- 152
Query: 63 QAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDG--RLSLEEFIE 108
G ++ +R IFR+ D +QDG ++S E+++
Sbjct: 153 -------GCIVL---------QRLTDIFRRYDTDQDGWIQVSYEQYLS 184
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
++VFRT+D + G ID E ALS +Q +D G G I+ ++ ++
Sbjct: 74 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ-- 131
Query: 63 QAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDG--RLSLEEFI 107
G ++ +R IFR+ D +QDG ++S E+++
Sbjct: 132 -------GCIVL---------QRLTDIFRRYDTDQDGWIQVSYEQYL 162
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 38 LRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQ 97
++ F + D D +G+I +E+ I++ D S E +T + DK+
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDAA-------DLSAKETKT--LMAAGDKDG 93
Query: 98 DGRLSLEEF 106
DG++ +EEF
Sbjct: 94 DGKIGVEEF 102
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
++VFRT+D + G ID E ALS +Q +D G G I+ ++ ++
Sbjct: 73 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ-- 130
Query: 63 QAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDG--RLSLEEFI 107
G ++ +R IFR+ D +QDG ++S E+++
Sbjct: 131 -------GCIVL---------QRLTDIFRRYDTDQDGWIQVSYEQYL 161
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 16/74 (21%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKM-PEDESTPEKRTDKIFRQMDK 95
+LR F+ D + +G + R E ++ + T +++ P D + +F+++D
Sbjct: 28 RLRSVFAACDANRSGRLEREE--------FRALCTELRVRPAD-------AEAVFQRLDA 72
Query: 96 NQDGRLSLEEFIEG 109
++DG ++ +EF G
Sbjct: 73 DRDGAITFQEFARG 86
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 2 AEHVFRTFDANGDGTIDFREF 22
AE VF+ DA+ DG I F+EF
Sbjct: 63 AEAVFQRLDADRDGAITFQEF 83
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 28.9 bits (63), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEM 58
+ + VF FD +G GTI E+ ++ ++ F DLD G + +EM
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEM 171
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 38 LRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQ 97
++ F + D D +G+I +E+ I++ D S E +T + DK+
Sbjct: 43 VKKVFHILDKDKDGFIDEDELGSILKGFSSD-------ARDLSAKETKT--LMAAGDKDG 93
Query: 98 DGRLSLEEF 106
DG++ +EEF
Sbjct: 94 DGKIGVEEF 102
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 1 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEM 58
+ E VF FD +G G+I E+ ++ ++ F DLD +G + +EM
Sbjct: 117 WGEAVFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEM 174
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 28.5 bits (62), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
V T D++GDG DF+EF+ +++ +
Sbjct: 57 VMETLDSDGDGECDFQEFMAFVAMITTA 84
>pdb|1E8A|A Chain A, The Three-Dimensional Structure Of Human S100a12
pdb|1E8A|B Chain B, The Three-Dimensional Structure Of Human S100a12
pdb|1GQM|A Chain A, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|B Chain B, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|C Chain C, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|D Chain D, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|E Chain E, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|F Chain F, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|G Chain G, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|H Chain H, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|I Chain I, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|J Chain J, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|K Chain K, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|L Chain L, The Structure Of S100a12 In A Hexameric Form
Length = 91
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
+F+ DAN D +DF+EF+ +++ +
Sbjct: 56 IFQGLDANQDEQVDFQEFISLVAIALKA 83
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E+ Q + K + +K +D++ D+IF+ +D NQD ++ +EFI
Sbjct: 31 ELKQLLTKELANTIKNIKDKAV----IDEIFQGLDANQDEQVDFQEFI 74
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 38 LRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQ 97
++ F + D D +G+I +E+ I++ D S E +T + DK+
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSD-------ARDLSAKETKT--LMAAGDKDG 93
Query: 98 DGRLSLEEF 106
DG++ +EEF
Sbjct: 94 DGKIGVEEF 102
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase
Length = 91
Score = 28.5 bits (62), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
V T D++GDG DF+EF+ +++ +
Sbjct: 56 VMETLDSDGDGECDFQEFMAFVAMITTA 83
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
V T D++GDG DF+EF+ +++ +
Sbjct: 57 VMETLDSDGDGECDFQEFMAFVAMITTA 84
>pdb|2WCE|A Chain A, Calcium-Free (Apo) S100a12
pdb|2WCE|B Chain B, Calcium-Free (Apo) S100a12
Length = 95
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
+F+ DAN D +DF+EF+ +++ +
Sbjct: 60 IFQGLDANQDEQVDFQEFISXVAIALKA 87
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E+ Q + K + +K +D++ D+IF+ +D NQD ++ +EFI
Sbjct: 35 ELKQLLTKELANTIKNIKDKAV----IDEIFQGLDANQDEQVDFQEFI 78
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To
Sbi4211
Length = 89
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
V T D++GDG DF+EF+ +++ +
Sbjct: 57 VMETLDSDGDGECDFQEFMAFVAMITTA 84
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
V T D++GDG DF+EF+ +++ +
Sbjct: 56 VMETLDSDGDGECDFQEFMAFVAMITTA 83
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 38 LRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQ 97
++ F + D D +G+I +E+ I++ D S E +T + DK+
Sbjct: 7 VKKVFHILDKDKSGFIEEDELGSILKGFSSD-------ARDLSAKETKT--LMAAGDKDG 57
Query: 98 DGRLSLEEF 106
DG++ +EEF
Sbjct: 58 DGKIGVEEF 66
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Query: 5 VFRTFDANGDGTIDFREF---LCALSVT 29
V + D NGDG +DF+E+ + AL+V
Sbjct: 57 VMKELDENGDGEVDFQEYVVLVAALTVA 84
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 86 TDKIFRQMDKNQDGRLSLEEFI 107
DK+ +++D+N DG + +E++
Sbjct: 54 VDKVMKELDENGDGEVDFQEYV 75
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Query: 5 VFRTFDANGDGTIDFREF---LCALSVT 29
V + D NGDG +DF+E+ + AL+V
Sbjct: 57 VMKELDENGDGEVDFQEYVVLVAALTVA 84
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 48 DGNGY-ISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+G+ Y +S+ E+ E++Q T + D DK+ +++D+N DG + +E+
Sbjct: 22 EGDKYKLSKKELKELLQ-------TELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEY 74
Query: 107 I 107
+
Sbjct: 75 V 75
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTS 30
+ + D NGDG +DF+EF+ ++ +
Sbjct: 57 IMKELDENGDGEVDFQEFVVLVAALT 82
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 86 TDKIFRQMDKNQDGRLSLEEFI 107
DKI +++D+N DG + +EF+
Sbjct: 54 VDKIMKELDENGDGEVDFQEFV 75
>pdb|1ODB|A Chain A, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|B Chain B, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|C Chain C, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|D Chain D, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|E Chain E, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|F Chain F, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|2WC8|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|C Chain C, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|D Chain D, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCF|A Chain A, Calcium-Free (Apo) S100a12
pdb|2WCF|B Chain B, Calcium-Free (Apo) S100a12
pdb|2WCF|C Chain C, Calcium-Free (Apo) S100a12
pdb|2WCF|D Chain D, Calcium-Free (Apo) S100a12
pdb|2WCF|E Chain E, Calcium-Free (Apo) S100a12
pdb|2WCF|F Chain F, Calcium-Free (Apo) S100a12
Length = 95
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E+ Q + K + +K +D++ D+IF+ +D NQD ++ +EFI
Sbjct: 35 ELKQLLTKELANTIKNIKDKAV----IDEIFQGLDANQDEQVDFQEFI 78
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
+F+ DAN D +DF+EF+ +++ +
Sbjct: 60 IFQGLDANQDEQVDFQEFISLVAIALKA 87
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/106 (16%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 2 AEHVFRTFDA-NGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLE 60
A+ + + DA +G+ + ++F + + + ++ F D D +G+I E+
Sbjct: 9 ADDIKKALDAVKAEGSFNHKKFFALVGLKAMS--ANDVKKVFKAIDADASGFIEEEELKF 66
Query: 61 IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
++++ + + T + DK+ DG++ ++EF
Sbjct: 67 VLKSF---------AADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 20 REFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
+ F + +TS K ++ AF++ D D +G+I +E+ +Q +
Sbjct: 28 KAFFAKVGLTS--KSADDVKKAFAIIDQDKSGFIEEDELKLFLQNF---------KADAR 76
Query: 80 STPEKRTDKIFRQMDKNQDGRLSLEEF 106
+ + T + D + DG++ ++EF
Sbjct: 77 ALTDGETKTFLKAGDSDGDGKIGVDEF 103
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTS 30
V + D NGDG +DF+E++ ++ +
Sbjct: 58 VMKELDENGDGEVDFQEYVVLVAALT 83
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 48 DGNGY-ISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+G+ Y +S+ E+ E++Q T + D DK+ +++D+N DG + +E+
Sbjct: 23 EGDKYKLSKKELKELLQ-------TELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEY 75
Query: 107 I 107
+
Sbjct: 76 V 76
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of
Human Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of
Human Apo-S100a1 E32q Mutant
Length = 93
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTS 30
V + D NGDG +DF+E++ ++ +
Sbjct: 57 VMKELDENGDGEVDFQEYVVLVAALT 82
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 86 TDKIFRQMDKNQDGRLSLEEFI 107
DK+ +++D+N DG + +E++
Sbjct: 54 VDKVMKELDENGDGEVDFQEYV 75
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTS 30
V + D NGDG +DF+E++ ++ +
Sbjct: 57 VMKELDENGDGEVDFQEYVVLVAALT 82
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 48 DGNGY-ISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
+G+ Y +S+ E+ E++Q T + D DK+ +++D+N DG + +E+
Sbjct: 22 EGDKYKLSKKELKELLQ-------TELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEY 74
Query: 107 I 107
+
Sbjct: 75 V 75
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
V T D +GDG DF+EF+ +++ +
Sbjct: 57 VMETLDNDGDGECDFQEFMAFVAMVTTA 84
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 80 STPEKRTDKIFRQMDKNQDGRLSLEEFI 107
S P+ + I+ D +QDG+L+ EEFI
Sbjct: 44 SLPQAQLASIWNLSDIDQDGKLTAEEFI 71
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 12/71 (16%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDK 95
Q+L F D DG+G IS E+ A G + T+K+ DK
Sbjct: 27 QELMEWFRAVDTDGSGAISVPEL----NAALSSAGVPFSLAT--------TEKLLHMYDK 74
Query: 96 NQDGRLSLEEF 106
N G ++ +EF
Sbjct: 75 NHSGEITFDEF 85
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 26/104 (25%)
Query: 6 FRTFDANGDGTIDFREFLCALSVT----SRGKLEQKLRWAFSMYDLDGNGYISRNEMLEI 61
FR D +G G I E ALS S E+ L MYD + +G I+ +E ++
Sbjct: 33 FRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLH----MYDKNHSGEITFDEFKDL 88
Query: 62 VQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEE 105
I M + FR+ D + DGRL E
Sbjct: 89 HHFILSM------------------REGFRKRDSSGDGRLDSNE 114
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
V T D +GDG DF+EF+ +++ +
Sbjct: 56 VMETLDNDGDGECDFQEFMAFVAMVTTA 83
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
Length = 92
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRG 32
V T D +GDG DF+EF+ +++ +
Sbjct: 57 VMETLDNDGDGECDFQEFMAFVAMVTTA 84
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 20 REFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
+EF + + S+ ++ AF + D D +G+I +E+ +Q P
Sbjct: 27 KEFFAKVGLASKSL--DDVKKAFYVIDQDKSGFIEEDELKLFLQNF---------SPSAR 75
Query: 80 STPEKRTDKIFRQMDKNQDGRLSLEEF 106
+ + T DK+ DG + ++EF
Sbjct: 76 ALTDAETKAFLADGDKDGDGMIGVDEF 102
>pdb|1OZO|A Chain A, Three-Dimensional Solution Structure Of Apo-S100p
Protein Determined By Nmr Spectroscopy
pdb|1OZO|B Chain B, Three-Dimensional Solution Structure Of Apo-S100p
Protein Determined By Nmr Spectroscopy
Length = 95
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTS 30
+ + + DANGD +DF EF+ ++ +
Sbjct: 55 DKLLKDLDANGDAQVDFSEFIVFVAAIT 82
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 33 KLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
KL Q+++ AF+M D + +G+I N++ E+ ++
Sbjct: 20 KLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSL 52
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth
Muscle Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth
Muscle Myosin
Length = 161
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 33 KLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
KL Q+++ AF+M D + +G+I N++ E+ ++
Sbjct: 20 KLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSL 52
>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid
Decarboxylase
Length = 343
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDP 114
++V + + + + P + PE+ T F Q+ KN G S +F+ A+ DP
Sbjct: 243 DLVNGLVALXNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDP 297
>pdb|4EF7|A Chain A, Udp-Xylose Synthase
pdb|4EF7|B Chain B, Udp-Xylose Synthase
pdb|4GLL|A Chain A, Crystal Structure Of Human Udp-Xylose Synthase.
pdb|4GLL|B Chain B, Crystal Structure Of Human Udp-Xylose Synthase
Length = 337
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 60 EIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDP 114
++V + ++ + + P + PE+ T F Q+ KN G S +F+ A+ DP
Sbjct: 221 DLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDP 275
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 21/29 (72%)
Query: 37 KLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
+ + AF+++D D NG IS +E+ +++++
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSL 39
>pdb|1E6V|C Chain C, Methyl-Coenzyme M Reductase From Methanopyrus Kandleri
pdb|1E6V|F Chain F, Methyl-Coenzyme M Reductase From Methanopyrus Kandleri
Length = 258
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 35 EQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPED 78
E L+ ++Y +DG Y E+L++VQ I+++ PE+
Sbjct: 211 EDDLKERTTIYRIDGTPYREDEELLQVVQRIHELRTLAGYRPEE 254
>pdb|1XK4|A Chain A, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|B Chain B, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|E Chain E, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|F Chain F, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|I Chain I, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|J Chain J, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|4GGF|A Chain A, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|K Chain K, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|S Chain S, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|U Chain U, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 93
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 6 FRTFDANGDGTIDFREFLC 24
F+ D N DG ++F+EFL
Sbjct: 55 FKELDINTDGAVNFQEFLI 73
>pdb|1J55|A Chain A, The Crystal Structure Of Ca+-Bound Human S100p
Determined At 2.0a Resolution By X-Ray
Length = 95
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTS 30
+ + + DANGD +DF EF+ ++ +
Sbjct: 55 DKLLKDLDANGDAQVDFSEFIVFVAAIT 82
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 87 DKIFRQMDKNQDGRLSLEEFI 107
D++ ++DKN DG +S EEF+
Sbjct: 48 DEMIEEVDKNGDGEVSFEEFL 68
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSR 31
+ + D NGDG + F EFL + S+
Sbjct: 48 DEMIEEVDKNGDGEVSFEEFLVMMKKISQ 76
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 22/107 (20%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIV 62
++VFRT+D + G ID E ALS + +D G G I+ ++ ++
Sbjct: 74 QNVFRTYDRDNSGMIDKNELKQALSGYRLSDQFHDI--LIRKFDRQGRGQIAFDDFIQ-- 129
Query: 63 QAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDG--RLSLEEFI 107
G ++ +R IFR+ D +QDG ++S E+++
Sbjct: 130 -------GCIVL---------QRLTDIFRRYDTDQDGWIQVSYEQYL 160
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEM 58
Q++R AF ++D DG G I E+
Sbjct: 31 QEIREAFDLFDADGTGTIDVKEL 53
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 4 HVFRTFDANGDGTIDFREFLCA 25
F FDA+G GTID +E A
Sbjct: 35 EAFDLFDADGTGTIDVKELKVA 56
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 2 AEHVFRTFDANGDGTIDFREFLC 24
A VF D NG G + F EF C
Sbjct: 172 ATTVFNEIDTNGSGVVTFDEFSC 194
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 4 HVFRTFDANGDGTIDFREFL 23
+F+ FD NG G + FRE L
Sbjct: 55 ELFKQFDTNGTGKLGFREVL 74
Score = 25.8 bits (55), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 75 MPEDESTPEK-RTDKIFRQMDKNQDGRLSLEEFIEGA 110
+P D+ K R ++F+Q D N G+L E ++G
Sbjct: 41 IPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGC 77
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 90 FRQMDKNQDGRLSLEEFI 107
F +D N DG LSLEEF+
Sbjct: 134 FDAIDTNNDGLLSLEEFV 151
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 72 VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 106
++K PE +S E FR +D N+D +S +E+
Sbjct: 82 MVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEY 116
>pdb|1MR8|A Chain A, Migration Inhibitory Factor-Related Protein 8 From Human
pdb|1MR8|B Chain B, Migration Inhibitory Factor-Related Protein 8 From Human
Length = 93
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 6 FRTFDANGDGTIDFREFL 23
F+ D N DG ++F+EFL
Sbjct: 55 FKELDINTDGAVNFQEFL 72
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 3 EHVFRTFDANGDGTIDFREFLCAL 26
E++ D +G GT+D+ EF C +
Sbjct: 46 ENMIAETDTDGSGTVDYEEFKCLM 69
>pdb|1IRJ|A Chain A, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|B Chain B, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|C Chain C, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|D Chain D, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|E Chain E, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|F Chain F, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|G Chain G, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|H Chain H, Crystal Structure Of The Mrp14 Complexed With Chaps
Length = 113
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 79 ESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E+ EK + I +D N D +LS EEFI
Sbjct: 51 ENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
>pdb|4GGF|C Chain C, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|L Chain L, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|T Chain T, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|V Chain V, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 114
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 79 ESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E+ EK + I +D N D +LS EEFI
Sbjct: 52 ENKNEKVIEHIMEDLDTNADKQLSFEEFI 80
>pdb|1XK4|C Chain C, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|D Chain D, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|G Chain G, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|H Chain H, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|K Chain K, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|L Chain L, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
Length = 113
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 79 ESTPEKRTDKIFRQMDKNQDGRLSLEEFI 107
E+ EK + I +D N D +LS EEFI
Sbjct: 51 ENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 87 DKIFRQMDKNQDGRLSLEEF 106
D++F ++DK DG +S EEF
Sbjct: 47 DELFEELDKAGDGEVSFEEF 66
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 5 VFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEML 59
+F+ D + GTI F E L +E +++ D+D +G I E +
Sbjct: 28 LFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFI 82
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 18/105 (17%)
Query: 4 HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQ 63
+F + +G G F++ L+ + E L+ F M + D G +S ++ +
Sbjct: 126 QLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVAN 185
Query: 64 AIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 108
+ +V FR++D N +G LS +EF E
Sbjct: 186 DLAALVAD------------------FRKIDTNSNGTLSRKEFRE 212
>pdb|3U5C|K Chain K, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
pdb|3U5G|K Chain K, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
Length = 105
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 27 SVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKR 85
S+TS+G ++ + W + Y L G E L + + I + GT ++ P++R
Sbjct: 48 SLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHI--VPGTYIQERNPTQRPQRR 104
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 46 DLDGNGYISRNEMLE-IVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLE 104
D DG R E E I QAI + E + ++R ++F++ DKN+ G+L +
Sbjct: 18 DKDGKKAKDRKEAWERIRQAIPR---------EKTAEAKQRRIELFKKFDKNETGKLXYD 68
Query: 105 EFIEG 109
E G
Sbjct: 69 EVYSG 73
>pdb|3VKH|A Chain A, X-Ray Structure Of A Functional Full-Length Dynein Motor
Domain
pdb|3VKH|B Chain B, X-Ray Structure Of A Functional Full-Length Dynein Motor
Domain
Length = 3367
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 85 RTDKIFRQMDKNQDGRLSLEEFIEGAK 111
R + I+R++ G ++LEEF++G +
Sbjct: 146 RNENIYREVITAAQGEIALEEFLKGVR 172
>pdb|3VKG|A Chain A, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein
Motor Domain
pdb|3VKG|B Chain B, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein
Motor Domain
Length = 3245
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 85 RTDKIFRQMDKNQDGRLSLEEFIEGAK 111
R + I+R++ G ++LEEF++G +
Sbjct: 146 RNENIYREVITAAQGEIALEEFLKGVR 172
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 15 GTIDFREFLCALSVTSRGK-LEQKLRWAFSMYDLDGNGYISRNEMLEIVQAI 65
G I+F FL G E +R AF+ +D + +G+I + + E++ +
Sbjct: 54 GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTM 105
>pdb|2XZM|7 Chain 7, Crystal Structure Of The Eukaryotic 40s Ribosomal
Subunit In Complex With Initiation Factor 1. This File
Contains The 40s Subunit And Initiation Factor For
Molecule 1
pdb|2XZN|7 Chain 7, Crystal Structure Of The Eukaryotic 40s Ribosomal
Subunit In Complex With Initiation Factor 1. This File
Contains The 40s Subunit And Initiation Factor For
Molecule 2
Length = 162
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 15 GTIDFREFLCALSVTSRGKLEQKLRWAFSMYDLDGNG 51
G + ++ S+ RG LE+ W F+ Y L+ G
Sbjct: 36 GVPNLHCYILVRSLKDRGFLEEIFNWGFTYYYLNKEG 72
>pdb|3GWP|A Chain A, Crystal Structure Of Carbon-Sulfur Lyase Involved In
Aluminum Resistance (Yp_878183.1) From Clostridium Novyi
Nt At 2.90 A Resolution
pdb|3GWP|B Chain B, Crystal Structure Of Carbon-Sulfur Lyase Involved In
Aluminum Resistance (Yp_878183.1) From Clostridium Novyi
Nt At 2.90 A Resolution
pdb|3GWP|C Chain C, Crystal Structure Of Carbon-Sulfur Lyase Involved In
Aluminum Resistance (Yp_878183.1) From Clostridium Novyi
Nt At 2.90 A Resolution
pdb|3GWP|D Chain D, Crystal Structure Of Carbon-Sulfur Lyase Involved In
Aluminum Resistance (Yp_878183.1) From Clostridium Novyi
Nt At 2.90 A Resolution
Length = 427
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 56 NEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKI-FRQMDKNQDGRLSLEEFIEGAKSDP 114
N L + Y + V+ + E+ + + I ++Q+D +DG+ +LEE + K D
Sbjct: 116 NTXLSVCGEPYDTLHDVIGITENSNXGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDE 175
Query: 115 SI 116
SI
Sbjct: 176 SI 177
>pdb|3I16|A Chain A, Crystal Structure Of Carbon-Sulfur Lyase Involved In
Aluminum Resistance (Yp_878183.1) From Clostridium Novyi
Nt At 2.00 A Resolution
pdb|3I16|B Chain B, Crystal Structure Of Carbon-Sulfur Lyase Involved In
Aluminum Resistance (Yp_878183.1) From Clostridium Novyi
Nt At 2.00 A Resolution
pdb|3I16|C Chain C, Crystal Structure Of Carbon-Sulfur Lyase Involved In
Aluminum Resistance (Yp_878183.1) From Clostridium Novyi
Nt At 2.00 A Resolution
pdb|3I16|D Chain D, Crystal Structure Of Carbon-Sulfur Lyase Involved In
Aluminum Resistance (Yp_878183.1) From Clostridium Novyi
Nt At 2.00 A Resolution
Length = 427
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 56 NEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKI-FRQMDKNQDGRLSLEEFIEGAKSDP 114
N L + Y + V+ + E+ + + I ++Q+D +DG+ +LEE + K D
Sbjct: 116 NTXLSVCGEPYDTLHDVIGITENSNXGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDE 175
Query: 115 SI 116
SI
Sbjct: 176 SI 177
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Query: 5 VFRTFDANGDGTIDFREF---LCALSVT 29
V + D +GDG +DF+E+ + AL+V
Sbjct: 57 VMKELDEDGDGEVDFQEYVVLVAALTVA 84
>pdb|2WES|A Chain A, Crystal Structures Of Mutant E46q Of Tryptophan 5-
Halogenase (pyrh)
pdb|2WES|B Chain B, Crystal Structures Of Mutant E46q Of Tryptophan 5-
Halogenase (pyrh)
pdb|2WES|C Chain C, Crystal Structures Of Mutant E46q Of Tryptophan 5-
Halogenase (pyrh)
pdb|2WES|D Chain D, Crystal Structures Of Mutant E46q Of Tryptophan 5-
Halogenase (pyrh)
Length = 511
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 29 TSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPED 78
T+ + W ++ DGNGY+ +E + +A ++ TV +D
Sbjct: 270 TTATAMSAGWMWTIPLFKRDGNGYVYSDEFISPEEAERELRSTVAPGRDD 319
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 9/33 (27%), Positives = 21/33 (63%)
Query: 36 QKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKM 68
Q+ + AF + D D +G+IS+N++ ++ ++
Sbjct: 57 QEFKEAFQLIDQDKDGFISKNDIRATFDSLGRL 89
>pdb|2WET|A Chain A, Crystal Structure Of Tryptophan 5-Halogenase (Pyrh)
Complex With Fad (Tryptophan)
pdb|2WET|B Chain B, Crystal Structure Of Tryptophan 5-Halogenase (Pyrh)
Complex With Fad (Tryptophan)
pdb|2WET|C Chain C, Crystal Structure Of Tryptophan 5-Halogenase (Pyrh)
Complex With Fad (Tryptophan)
pdb|2WET|D Chain D, Crystal Structure Of Tryptophan 5-Halogenase (Pyrh)
Complex With Fad (Tryptophan)
pdb|2WEU|A Chain A, Crystal Structure Of Tryptophan 5-Halogenase (Pyrh)
Complex With Substrate Tryptophan
pdb|2WEU|B Chain B, Crystal Structure Of Tryptophan 5-Halogenase (Pyrh)
Complex With Substrate Tryptophan
pdb|2WEU|C Chain C, Crystal Structure Of Tryptophan 5-Halogenase (Pyrh)
Complex With Substrate Tryptophan
pdb|2WEU|D Chain D, Crystal Structure Of Tryptophan 5-Halogenase (Pyrh)
Complex With Substrate Tryptophan
Length = 511
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 29 TSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPED 78
T+ + W ++ DGNGY+ +E + +A ++ TV +D
Sbjct: 270 TTATAMSAGWMWTIPLFKRDGNGYVYSDEFISPEEAERELRSTVAPGRDD 319
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 25.8 bits (55), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 20 REFLCALSVTSRGKLEQKLRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDE 79
+ F + +TS K ++ AF++ D D +G+I +E+ +Q +
Sbjct: 27 KAFFAKVGLTS--KSADDVKKAFAIIDQDKSGFIEEDELKLFLQNF---------KADAR 75
Query: 80 STPEKRTDKIFRQMDKNQDGRLSLEEF 106
+ + T + D + DG++ ++E+
Sbjct: 76 ALTDGETKTFLKAGDSDGDGKIGVDEW 102
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 38 LRWAFSMYDLDGNGYISRNEMLEIVQAIYKMVGTVMKMPEDESTPEKRTDKIFRQMDKNQ 97
++ F + D D +G+I +E+ I++ D S E +T + DK+
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSD-------ARDLSAKETKT--LMAAGDKDG 93
Query: 98 DGRLSLEEF 106
G++ +EEF
Sbjct: 94 SGKIEVEEF 102
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 9/130 (6%)
Query: 3 EHVFRTFDANGDGTIDFREFLCALS---VTSRGKLEQKLR----WAFSMYDLDGNGYISR 55
+H+F D N +G I E + S + + G ++ + + + G Y
Sbjct: 19 KHMFNFLDVNHNGRISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVE 78
Query: 56 NEMLEIVQAIYKMVGTVMKMPEDESTPEKRT--DKIFRQMDKNQDGRLSLEEFIEGAKSD 113
E E ++ ++ +K R D +F +DK+Q+G +SL+E+ KS
Sbjct: 79 TEWPEYIEGWKRLASEELKRYSKNQITLIRLWGDALFDIIDKDQNGAISLDEWKAYTKSA 138
Query: 114 PSIVRLLQCD 123
I C+
Sbjct: 139 GIIQSSEDCE 148
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 25.0 bits (53), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 3 EHVFRTFDANGDGTIDFREFL 23
E + + D N DG IDF EFL
Sbjct: 8 EDLMKDSDKNNDGRIDFDEFL 28
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,824,708
Number of Sequences: 62578
Number of extensions: 142510
Number of successful extensions: 1570
Number of sequences better than 100.0: 324
Number of HSP's better than 100.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 416
Number of HSP's gapped (non-prelim): 760
length of query: 127
length of database: 14,973,337
effective HSP length: 87
effective length of query: 40
effective length of database: 9,529,051
effective search space: 381162040
effective search space used: 381162040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)