RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15328
(76 letters)
>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2,
GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}
Length = 189
Score = 49.5 bits (117), Expect = 1e-09
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 34 AEIQEWYKGFLKDCPTGHLSVEEFKKIYGNFFPYGDASKYSKD 76
A++QEWYK FL++CP+G L + EFK+ + +A++Y +
Sbjct: 21 AQLQEWYKKFLEECPSGTLFMHEFKRFFK-VPDNEEATQYVEA 62
>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 190
Score = 48.7 bits (115), Expect = 3e-09
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 35 EIQEWYKGFLKDCPTGHLSVEEFKKIYGNFFPYGDASKYSK 75
EIQ+W+KGFL+DCP+G L+ E+F KIY FFP+G ++
Sbjct: 26 EIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFAN 66
>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}
Length = 201
Score = 48.3 bits (114), Expect = 3e-09
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 35 EIQEWYKGFLKDCPTGHLSVEEFKKIYGNFFPYGDASKYSKD 76
E+ WY+ FLK+CP+G ++ +EF+ IY FFP D Y++
Sbjct: 26 ELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQH 67
>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 187
Score = 47.9 bits (113), Expect = 5e-09
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 35 EIQEWYKGFLKDCPTGHLSVEEFKKIYGNFFPYGDASKYSK 75
E+Q+WYKGF+KDCP+G L F+KIY FFP+GD +K++
Sbjct: 23 EVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFAT 63
>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting
protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 178
Score = 47.5 bits (112), Expect = 5e-09
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 35 EIQEWYKGFLKDCPTGHLSVEEFKKIYGNFFPYGDASKYSK 75
E+Q Y+GF +CP+G ++ E FK+IY FFP+GDAS Y+
Sbjct: 14 ELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAH 54
>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId:
9913]}
Length = 181
Score = 46.0 bits (108), Expect = 3e-08
Identities = 35/42 (83%), Positives = 41/42 (97%)
Query: 35 EIQEWYKGFLKDCPTGHLSVEEFKKIYGNFFPYGDASKYSKD 76
EIQEWYKGFL+DCP+GHLS+EEFKKIYGNFFPYGDASK+++
Sbjct: 22 EIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEH 63
>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 44.2 bits (104), Expect = 5e-08
Identities = 5/43 (11%), Positives = 13/43 (30%), Gaps = 5/43 (11%)
Query: 34 AEIQEWYKGF-----LKDCPTGHLSVEEFKKIYGNFFPYGDAS 71
++ + K F K + E F++ + +
Sbjct: 25 KKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVP 67
>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB
{Human (Homo sapiens) [TaxId: 9606]}
Length = 180
Score = 34.7 bits (79), Expect = 3e-04
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 35 EIQEWYKGFLKDCPTGHLSVEEFKKIYGNF-----FPYGDASKYSK 75
EI ++ F + P SVE + F P A+ + +
Sbjct: 15 EILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKE 60
>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 183
Score = 29.9 bits (66), Expect = 0.019
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 4/37 (10%)
Query: 35 EIQEWYKGFLKDCPT----GHLSVEEFKKIYGNFFPY 67
EI+ Y+ F K G ++ EEF+
Sbjct: 15 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK 51
>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 156
Score = 26.5 bits (57), Expect = 0.30
Identities = 6/42 (14%), Positives = 14/42 (33%)
Query: 34 AEIQEWYKGFLKDCPTGHLSVEEFKKIYGNFFPYGDASKYSK 75
E + + F+ G +S +E K+ + +
Sbjct: 14 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQE 55
>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 170
Score = 24.2 bits (52), Expect = 1.8
Identities = 4/23 (17%), Positives = 11/23 (47%)
Query: 39 WYKGFLKDCPTGHLSVEEFKKIY 61
K ++ G + V+ F +++
Sbjct: 11 LVKLKMQLNSEGKIPVKNFFQMF 33
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA
{Borrelia burgdorferi [TaxId: 139]}
Length = 322
Score = 24.0 bits (52), Expect = 1.8
Identities = 4/21 (19%), Positives = 5/21 (23%)
Query: 40 YKGFLKDCPTGHLSVEEFKKI 60
YK F+ T
Sbjct: 22 YKKFISKFKTEREVTAYALDK 42
>d1m7sa_ e.5.1.1 (A:) Catalase I {Pseudomonas syringae [TaxId:
317]}
Length = 484
Score = 23.7 bits (51), Expect = 2.5
Identities = 6/15 (40%), Positives = 6/15 (40%)
Query: 61 YGNFFPYGDASKYSK 75
G F D S SK
Sbjct: 59 KGEFTASADISDLSK 73
>d1n93x_ a.206.1.1 (X:) P40 nucleoprotein {Borna disease virus
[TaxId: 12455]}
Length = 343
Score = 23.8 bits (51), Expect = 2.8
Identities = 4/19 (21%), Positives = 11/19 (57%)
Query: 56 EFKKIYGNFFPYGDASKYS 74
+ K+ + + FP+ A ++
Sbjct: 244 KLKEDHADLFPFLGAIRHP 262
>d1gwea_ e.5.1.1 (A:) Catalase I {Micrococcus lysodeikticus
[TaxId: 1270]}
Length = 498
Score = 23.8 bits (51), Expect = 3.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 61 YGNFFPYGDASKYSK 75
+G F D SKY+K
Sbjct: 63 FGEFEVTEDVSKYTK 77
>d1qwla_ e.5.1.1 (A:) Catalase I {Helicobacter pylori [TaxId:
210]}
Length = 491
Score = 23.4 bits (50), Expect = 3.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 61 YGNFFPYGDASKYSK 75
YG F D +KY+K
Sbjct: 63 YGTFTVTKDITKYTK 77
>d1si8a_ e.5.1.1 (A:) Catalase I {Enterococcus faecalis [TaxId:
1351]}
Length = 474
Score = 23.3 bits (50), Expect = 3.7
Identities = 4/15 (26%), Positives = 8/15 (53%)
Query: 61 YGNFFPYGDASKYSK 75
+G F ++Y+K
Sbjct: 58 HGIFKVSQSMAQYTK 72
>d1p80a2 e.5.1.1 (A:27-597) Catalase II {Escherichia coli, HPII
[TaxId: 562]}
Length = 571
Score = 23.4 bits (50), Expect = 4.0
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 61 YGNFFPYGDASKYSK 75
+G F PY S +K
Sbjct: 109 HGYFQPYKSLSDITK 123
>d1a4ea_ e.5.1.1 (A:) Catalase I {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 488
Score = 23.0 bits (49), Expect = 4.6
Identities = 3/15 (20%), Positives = 5/15 (33%)
Query: 61 YGNFFPYGDASKYSK 75
+G F D +
Sbjct: 63 FGYFEVTDDITDICG 77
>d1dgfa_ e.5.1.1 (A:) Catalase I {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 22.9 bits (49), Expect = 5.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 61 YGNFFPYGDASKYSK 75
+G F D +KYSK
Sbjct: 78 FGYFEVTHDITKYSK 92
>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific
5'-nucleotidase {Legionella pneumophila [TaxId: 446]}
Length = 458
Score = 22.9 bits (49), Expect = 5.0
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 52 LSVEEFKKIYGNFFPYGDASKY 73
+S + KKIY + + Y
Sbjct: 99 ISFSDQKKIYRSIYVDLGDPNY 120
>d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa
(Cellvibrio japonicus) [TaxId: 155077]}
Length = 381
Score = 23.1 bits (49), Expect = 5.5
Identities = 5/39 (12%), Positives = 17/39 (43%)
Query: 25 REGRDGRRDAEIQEWYKGFLKDCPTGHLSVEEFKKIYGN 63
+G G ++ ++ + + ++E+F+ Y +
Sbjct: 323 PQGVPGPNGTQVPHYWVPANRPENINNGTLEDFQAFYAD 361
>d1e93a_ e.5.1.1 (A:) Catalase I {Proteus mirabilis [TaxId: 584]}
Length = 476
Score = 22.9 bits (49), Expect = 5.7
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 61 YGNFFPYGDASKYSK 75
+G F D +KY++
Sbjct: 58 FGTFTVTHDITKYTR 72
>d1drsa_ g.7.1.2 (A:) Dendroaspin {Dendroaspis jamesoni kaimosae
[TaxId: 8619]}
Length = 59
Score = 22.1 bits (47), Expect = 6.2
Identities = 3/12 (25%), Positives = 4/12 (33%)
Query: 13 KGWNSGTKLERG 24
W + RG
Sbjct: 25 NIWTFDNIIRRG 36
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.137 0.454
Gapped
Lambda K H
0.267 0.0540 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 328,598
Number of extensions: 13068
Number of successful extensions: 65
Number of sequences better than 10.0: 1
Number of HSP's gapped: 64
Number of HSP's successfully gapped: 32
Length of query: 76
Length of database: 2,407,596
Length adjustment: 43
Effective length of query: 33
Effective length of database: 1,817,206
Effective search space: 59967798
Effective search space used: 59967798
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.3 bits)