RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15330
(60 letters)
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal
specific guanylate cyclase activator; 2.40A {Bos taurus}
SCOP: a.39.1.5
Length = 193
Score = 80.3 bits (198), Expect = 3e-21
Identities = 50/59 (84%), Positives = 55/59 (93%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQCDPQN 59
MV +VMKMPEDESTPEKRT+KIFRQMD N+DG+LSLEEFI GAKSDPSIVRLLQCDP +
Sbjct: 131 MVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLLQCDPSS 189
Score = 28.7 bits (64), Expect = 0.063
Identities = 10/39 (25%), Positives = 14/39 (35%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ K + +FR D N DG + EFI
Sbjct: 50 KIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIA 88
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 76.6 bits (188), Expect = 1e-19
Identities = 26/56 (46%), Positives = 40/56 (71%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQCDPQN 59
V +P+DE+TPEKR +KI++ KN D +L+ +EFIEG ++ I+RL+Q +PQ
Sbjct: 144 DVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLANKEILRLIQFEPQK 199
Score = 26.1 bits (57), Expect = 0.52
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 5 VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ ++ P+ +FR D N DG L +E++
Sbjct: 59 IYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIA 96
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 72.5 bits (178), Expect = 3e-18
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQ 54
MVG+++K+PEDE TPEKR +KIF MDKN+DG+L+LEEF EG+K DP+IV L
Sbjct: 131 MVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALS 184
Score = 24.4 bits (53), Expect = 2.7
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ K P + +F D +++G + +EFI
Sbjct: 50 KIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICA 88
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand,
transport protein; 2.00A {Rattus norvegicus} SCOP:
a.39.1.5 PDB: 2nz0_A 2i2r_E
Length = 183
Score = 71.0 bits (174), Expect = 1e-17
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQCD 56
M+G E TP + D F++MDKN+DG ++L+EF+E + D +I+R LQ
Sbjct: 124 MMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDDNIMRSLQLF 179
Score = 28.2 bits (63), Expect = 0.087
Identities = 6/39 (15%), Positives = 11/39 (28%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ +F D Q G + E+F+
Sbjct: 43 QIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTA 81
Score = 24.4 bits (53), Expect = 2.5
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 14 TPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
T ++ F D N+DG ++ EE ++
Sbjct: 89 TVHEKLRWTFNLYDINKDGYINKEEMMD 116
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 70.6 bits (173), Expect = 1e-17
Identities = 33/54 (61%), Positives = 45/54 (83%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQ 54
MVG +++PE+E+TPEKR D+IF MDKN DG+L+L+EF EG+K+DPSIV+ L
Sbjct: 131 MVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALS 184
Score = 25.2 bits (55), Expect = 1.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 12 ESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
P K +F D+N+DGR+ EFI+
Sbjct: 58 FGDPTKFATFVFNVFDENKDGRIEFSEFIQA 88
Score = 23.6 bits (51), Expect = 5.0
Identities = 6/32 (18%), Positives = 16/32 (50%)
Query: 14 TPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 45
T +++ F+ D + DG ++ E ++ +
Sbjct: 96 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 71.1 bits (174), Expect = 2e-17
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQCDP 57
M+G E P + + F++MDKN+DG ++++EFIE + D +I+R +Q
Sbjct: 170 MMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFE 226
Score = 29.5 bits (66), Expect = 0.034
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 5 VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ + +F D + +G +S E+FI+G
Sbjct: 90 IYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKG 127
Score = 23.7 bits (51), Expect = 4.6
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 14 TPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 45
T +++ + F D N+DG ++ EE ++ K+
Sbjct: 135 TVQEKLNWAFNLYDINKDGYITKEEMLDIMKA 166
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 69.5 bits (170), Expect = 4e-17
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQ 54
M+G+++ + EDE+TPE R KIF+ MDKN+DG ++L+EF EG+K DPSI+ L
Sbjct: 131 MMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALN 184
Score = 24.0 bits (52), Expect = 3.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ K +PE + +F DK+ +G + EEFI
Sbjct: 50 KIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITV 88
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 69.6 bits (170), Expect = 6e-17
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQCDP 57
M+G E TP + D F++MDKN+DG ++L+EF+E + D +I+R LQ
Sbjct: 157 MMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQ 213
Score = 28.0 bits (62), Expect = 0.12
Identities = 6/32 (18%), Positives = 10/32 (31%)
Query: 11 DESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+F D Q G + E+F+
Sbjct: 83 PHGDASTYAHYLFNAFDTTQTGSVKFEDFVTA 114
Score = 23.8 bits (51), Expect = 3.7
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 14 TPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
T ++ F D N+DG ++ EE ++
Sbjct: 122 TVHEKLRWTFNLYDINKDGYINKEEMMD 149
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 69.1 bits (169), Expect = 8e-17
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 1 MVGTVMKMPEDES-----TPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQC 55
+ E E TPE+ D+IF +D+N DG+LSL EF+EGA+ D ++++LQ
Sbjct: 127 LKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQM 186
Query: 56 DPQ 58
D
Sbjct: 187 DLN 189
Score = 28.6 bits (64), Expect = 0.065
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ + +FR D N D + E++
Sbjct: 57 ATQYVEAMFRAFDTNGDNTIDFLEYVAA 84
Score = 24.4 bits (53), Expect = 2.3
Identities = 8/46 (17%), Positives = 22/46 (47%)
Query: 14 TPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQCDPQN 59
T E + F+ DK+++G + +E ++ +S + + + +
Sbjct: 92 TLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEA 137
Score = 23.6 bits (51), Expect = 4.2
Identities = 5/23 (21%), Positives = 10/23 (43%)
Query: 26 MDKNQDGRLSLEEFIEGAKSDPS 48
+++ G L + EF K +
Sbjct: 32 LEECPSGTLFMHEFKRFFKVPDN 54
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 66.6 bits (162), Expect = 1e-15
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQCD 56
M+G E P + ++ F++MD+NQDG ++++EF+E + D +I+ +Q
Sbjct: 197 MMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQLF 252
Score = 26.5 bits (58), Expect = 0.40
Identities = 6/38 (15%), Positives = 14/38 (36%)
Query: 5 VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ + +F D + +G + E+F+ G
Sbjct: 117 IYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVG 154
Score = 23.1 bits (49), Expect = 6.5
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 13 STPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
T ++ F D N+DG ++ EE +
Sbjct: 161 GTVHEKLKWAFNLYDINKDGCITKEEMLA 189
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 65.2 bits (159), Expect = 2e-15
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 6 MKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQ 54
+ + T E+ T+ +F ++D N DG LSLEEF+EG + D ++ +L
Sbjct: 120 INRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILT 168
Score = 32.4 bits (74), Expect = 0.003
Identities = 7/40 (17%), Positives = 16/40 (40%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ + K +++F D N+DG + E++
Sbjct: 38 KQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAA 77
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase
activator; 3.00A {Homo sapiens}
Length = 211
Score = 64.8 bits (158), Expect = 4e-15
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 1 MVGTVMKM-PEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQ 54
M V + + +PE+ + +F ++D N DG L+LEEFI G D ++ ++
Sbjct: 118 MFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVY 172
Score = 30.5 bits (69), Expect = 0.017
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
T++ + K D+++ D N+DG + EFI
Sbjct: 43 KTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAA 82
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 63.6 bits (155), Expect = 6e-15
Identities = 11/54 (20%), Positives = 20/54 (37%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQ 54
+ G S ++ D I + D ++DG ++L EF P +
Sbjct: 127 LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFK 180
Score = 23.6 bits (51), Expect = 4.1
Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 6 MKMPEDESTPEKRTDKIFRQMDKNQ-DGRLSLEEFIEG 42
+ +PE ++ P K ++I R + LS E+F++
Sbjct: 51 LSLPELKANPFK--ERICRVFSTSPAKDSLSFEDFLDL 86
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 61.7 bits (150), Expect = 5e-14
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 7 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQ 54
++ E E DK F Q D+ DG++ ++E+ + +PS+++ +
Sbjct: 145 ELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMT 192
Score = 30.1 bits (68), Expect = 0.020
Identities = 7/39 (17%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ + D+IF D ++G + EF+
Sbjct: 63 LALFRNRNRRNLF--ADRIFDVFDVKRNGVIEFGEFVRS 99
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 61.8 bits (150), Expect = 6e-14
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 6 MKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQ 54
M ++ E DK F + D DG++ EE+ PS+++ +
Sbjct: 155 SGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMT 203
Score = 28.2 bits (63), Expect = 0.090
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 5 VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ + + D++F D +G L EEF
Sbjct: 75 ALFKTNKKESLF--ADRVFDLFDTKHNGILGFEEFARA 110
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 59.5 bits (144), Expect = 4e-13
Identities = 11/54 (20%), Positives = 20/54 (37%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQ 54
+ G S ++ D I + D ++DG ++L EF P +
Sbjct: 158 LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFK 211
Score = 23.7 bits (51), Expect = 4.3
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 5 VMKMPEDESTPEKRTDKIFRQMDKNQ-DGRLSLEEFIEG 42
++ +PE ++ P K ++I R + LS E+F++
Sbjct: 81 ILSLPELKANPFK--ERICRVFSTSPAKDSLSFEDFLDL 117
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A
{Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 45.1 bits (107), Expect = 8e-08
Identities = 6/46 (13%), Positives = 21/46 (45%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSD 46
++ ++ + + D+ ++ D++ D +S EF++ +
Sbjct: 138 VLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKV 183
Score = 27.4 bits (61), Expect = 0.21
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
F +DK ++G LS E+F
Sbjct: 33 SRFTSLDKGENGTLSREDF 51
Score = 27.4 bits (61), Expect = 0.21
Identities = 6/37 (16%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Query: 6 MKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
++PE P D+I + +++ F+
Sbjct: 52 QRIPELAINPLG--DRIINAFFSEGEDQVNFRGFMRT 86
Score = 23.2 bits (50), Expect = 5.7
Identities = 8/36 (22%), Positives = 19/36 (52%)
Query: 6 MKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ PE ++ + FR D ++D ++S +E ++
Sbjct: 102 VNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQ 137
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 43.4 bits (102), Expect = 1e-07
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 8 MPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSD 46
M E E + + + + +D NQD ++LEEF+ +
Sbjct: 63 MREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRK 101
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 37.4 bits (87), Expect = 6e-05
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEG 42
IFR +DKN DG+L +E I+G
Sbjct: 350 DIFRHIDKNGDGQLDRQELIDG 371
Score = 35.4 bits (82), Expect = 2e-04
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 11 DESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ K ++ +D N DG + EEF +
Sbjct: 454 LDHLESKTWKEMISGIDSNNDGDVDFEEFCK 484
Score = 32.7 bits (75), Expect = 0.002
Identities = 9/42 (21%), Positives = 15/42 (35%)
Query: 2 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGA 43
+ D E D I D +++G + EF+ A
Sbjct: 375 LSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVA 416
Score = 24.7 bits (54), Expect = 1.8
Identities = 5/26 (19%), Positives = 17/26 (65%)
Query: 16 EKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ + + F++ D++ +G++S++E
Sbjct: 425 KDKLESAFQKFDQDGNGKISVDELAS 450
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 37.0 bits (86), Expect = 7e-05
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEG 42
IF +MDKN DG+L E IEG
Sbjct: 339 AIFHKMDKNGDGQLDRAELIEG 360
Score = 34.7 bits (80), Expect = 5e-04
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 11 DESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ + ++DKN DG + +EF +
Sbjct: 446 VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 476
Score = 32.4 bits (74), Expect = 0.003
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 9 PEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGA 43
D S E D++ +D +++G + EF+ A
Sbjct: 374 MLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVA 408
Score = 25.4 bits (56), Expect = 1.2
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 16 EKRTDKIFRQMDKNQDGRLSLEEFIE 41
+R ++ FR D + G++S E
Sbjct: 417 RERLERAFRMFDSDNSGKISSTELAT 442
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic,
ER, golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 36.5 bits (84), Expect = 9e-05
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 8 MPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAK 44
E D + R DKN DG + EF + +
Sbjct: 107 PLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ 143
Score = 26.5 bits (58), Expect = 0.42
Identities = 9/39 (23%), Positives = 16/39 (41%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
V+ PE E +P++ F+ D + + L E
Sbjct: 54 EGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELST 92
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 36.6 bits (85), Expect = 1e-04
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEG 42
IF+++DKN DG+L +E IEG
Sbjct: 359 DIFKKLDKNGDGQLDKKELIEG 380
Score = 35.4 bits (82), Expect = 3e-04
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 11 DESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
S EK + + + D+N+D + +EF+
Sbjct: 463 LTSISEKTWNDVLGEADQNKDNMIDFDEFVS 493
Score = 33.1 bits (76), Expect = 0.002
Identities = 8/42 (19%), Positives = 18/42 (42%)
Query: 2 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGA 43
+ + E+ D I +++D +++G + EFI
Sbjct: 384 LRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVC 425
Score = 25.0 bits (55), Expect = 1.5
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 16 EKRTDKIFRQMDKNQDGRLSLEEFIE 41
E+R + F D ++ G+++ EE
Sbjct: 434 EERLRRAFNLFDTDKSGKITKEELAN 459
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 36.6 bits (85), Expect = 1e-04
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEG 42
+IFR++D N DG L +E + G
Sbjct: 335 EIFRKLDTNNDGMLDRDELVRG 356
Score = 35.8 bits (83), Expect = 2e-04
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 10 EDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
D S + + I Q+D N+DG + EF+E
Sbjct: 446 ADSSIQMEELESIIEQVDNNKDGEVDFNEFVE 477
Score = 32.3 bits (74), Expect = 0.004
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 8 MPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGA 43
+ + ST E + D + +D + G + EFI A
Sbjct: 372 IQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASA 407
Score = 24.3 bits (53), Expect = 2.5
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 16 EKRTDKIFRQMDKNQDGRLSLEEFIE 41
+R ++ F+ DK+ G++S +E +
Sbjct: 416 RERMERAFKMFDKDGSGKISTKELFK 441
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 34.5 bits (80), Expect = 1e-04
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIEGAKS 45
+ +F+++D N DG +S EE
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSK 28
Score = 31.4 bits (72), Expect = 0.003
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 45
E+ IF+ +D + +G + EF + S
Sbjct: 34 NEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein,
calcium-binding protein, NHE1 regulating protein; 2.70A
{Homo sapiens}
Length = 202
Score = 36.3 bits (84), Expect = 1e-04
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
++ ++ + E E D+ ++ D++ DG +S EF +
Sbjct: 139 VLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTK 179
Score = 27.4 bits (61), Expect = 0.22
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
FR +D+N+ G LS +
Sbjct: 33 HRFRALDRNKKGYLSRMDL 51
Score = 25.9 bits (57), Expect = 0.68
Identities = 5/38 (13%), Positives = 12/38 (31%), Gaps = 2/38 (5%)
Query: 5 VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ ++ P D+I + R+ F+
Sbjct: 51 LQQIGALAVNPLG--DRIIESFFPDGSQRVDFPGFVRV 86
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding
protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB:
2scp_A
Length = 174
Score = 34.3 bits (79), Expect = 6e-04
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ F +D N DG LSLEEF+
Sbjct: 126 DKTMAPASFDAIDTNNDGLLSLEEFVI 152
Score = 34.3 bits (79), Expect = 7e-04
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 16 EKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 45
++ F ++D ++DG ++ +F A+
Sbjct: 5 VQKMKTYFNRIDFDKDGAITRMDFESMAER 34
Score = 33.5 bits (77), Expect = 0.001
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ ++K PE +S E FR +D N+D +S +E+
Sbjct: 78 SMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEY 116
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 34.1 bits (78), Expect = 8e-04
Identities = 2/27 (7%), Positives = 6/27 (22%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFIE 41
++ + L + E
Sbjct: 137 QCADVPAVYNVITDGGKVTFDLNRYKE 163
Score = 29.1 bits (65), Expect = 0.043
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 1 MVGTVMKMPEDESTPE---KRTDKIFRQMDKNQDGRLSLEEF 39
T+ P R +F+ MD + DG + LEEF
Sbjct: 86 WEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEF 127
Score = 29.1 bits (65), Expect = 0.046
Identities = 7/44 (15%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 16 EKRTDKIFRQM-DKNQDGRLSLEEFIEGAKSDPSIVRLLQCDPQ 58
+++ F D N DG + +F + + + D
Sbjct: 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDAD 50
Score = 26.8 bits (59), Expect = 0.32
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIEGAK 44
+ + D N+D +S EE++ +
Sbjct: 63 RDLKGRADINKDDVVSWEEYLAMWE 87
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 33.7 bits (77), Expect = 0.001
Identities = 4/22 (18%), Positives = 7/22 (31%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
D F + ++ E F
Sbjct: 146 DAAFDTLSDGGKTMVTREIFAR 167
Score = 29.4 bits (66), Expect = 0.041
Identities = 8/54 (14%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Query: 8 MPEDESTPE--KRTDKIFRQM-DKNQDGRLSLEEFIEGAKSDPSIVRLLQCDPQ 58
M + + + ++F D N DG + ++F K ++ +
Sbjct: 1 MAAHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKK 54
Score = 28.7 bits (64), Expect = 0.064
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 7 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAK 44
K E +T + D + + D+N+D +++ EE+++
Sbjct: 54 KHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWA 91
Score = 28.7 bits (64), Expect = 0.072
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 1 MVGTVMKMPEDESTPE---KRTDKIFRQMDKNQDGRLSLEEF 39
V + + ES PE K + +F D + D + E+
Sbjct: 90 WAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEY 131
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence,
southeast collabora structural genomics, secsg,
structural genomics, PSI; HET: CTZ; 1.72A {Renilla
muelleri} PDB: 2hq8_A
Length = 186
Score = 33.6 bits (77), Expect = 0.001
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
F +D N++G++S +EF+
Sbjct: 141 ITCFNTLDFNKNGQISRDEFLV 162
Score = 32.8 bits (75), Expect = 0.002
Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Query: 8 MPE--DESTPEKRTD--KIFRQMDKNQDGRLSLEEFIEGAKS 45
MPE + +++D DG +S E++ A
Sbjct: 1 MPEITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVR 42
Score = 28.9 bits (65), Expect = 0.050
Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 1 MVGTVMKMPEDESTPEK-RTDKIFRQMDKNQDGRLSLEEF 39
+++KM +E ++ ++ +D ++DG +SL EF
Sbjct: 85 ATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEF 124
Score = 26.2 bits (58), Expect = 0.47
Identities = 7/43 (16%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 2 VGTVMKMPEDESTPEKRT-DKIFRQMDKNQDGRLSLEEFIEGA 43
+ + K+ +++ ++ ++ Q+ R+S+EE A
Sbjct: 43 IAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNA 85
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora
erythraea} SCOP: a.39.1.5
Length = 176
Score = 33.2 bits (76), Expect = 0.002
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ + F Q+D N +G LSL+E +
Sbjct: 134 SKAEAAEAFNQVDTNGNGELSLDELLT 160
Score = 30.5 bits (69), Expect = 0.018
Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 14 TPEKRTDKI---FRQMDKNQDGRLSLEEFIEGAKS 45
T +D++ F + D + +G L +F + A+
Sbjct: 1 TTAIASDRLKKRFDRWDFDGNGALERADFEKEAQH 35
Score = 29.3 bits (66), Expect = 0.041
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 1 MVGTVMKMPEDESTPEKRTDKI---FRQMDKNQDGRLSLEEF 39
+ ++ + S + DKN DG+++ +EF
Sbjct: 83 VTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEF 124
Score = 28.6 bits (64), Expect = 0.085
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIEGAKS 45
D + ++ DG L+ E+FI ++
Sbjct: 61 DYLAKEAGVGSDGSLTEEQFIRVTEN 86
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 32.9 bits (75), Expect = 0.002
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFIE 41
P++ F + D ++ G+L E +
Sbjct: 160 PQEAAYTFFEKADTDKSGKLERTELVH 186
Score = 31.7 bits (72), Expect = 0.006
Identities = 9/46 (19%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 2 VGTVMKMPEDESTPEKRTD--KIFRQMDKNQDGRLSLEEFIEGAKS 45
VG + ++ P+ + K F D + DG++ ++E +
Sbjct: 19 VGNQWQFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDR 64
Score = 29.0 bits (65), Expect = 0.057
Identities = 4/45 (8%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Query: 1 MVGTVMKMPEDESTPEKRT-DKIFRQMDKNQDGRLSLEEFIEGAK 44
+ ++ +++ + F L E+++E +
Sbjct: 64 RMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANR 108
Score = 26.3 bits (58), Expect = 0.56
Identities = 4/20 (20%), Positives = 11/20 (55%)
Query: 20 DKIFRQMDKNQDGRLSLEEF 39
+ + +D + DG + ++E
Sbjct: 131 NSYYDVLDDDGDGTVDVDEL 150
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 32.9 bits (75), Expect = 0.002
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
V++ + K+ + F +D + LS +EF+
Sbjct: 277 KVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVM 314
Score = 30.2 bits (68), Expect = 0.024
Identities = 5/34 (14%), Positives = 13/34 (38%)
Query: 8 MPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ D +FR D+++ + E++
Sbjct: 214 FVRLGFDKKSVQDALFRYADEDESDDVGFSEYVH 247
Score = 29.4 bits (66), Expect = 0.043
Identities = 3/22 (13%), Positives = 10/22 (45%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEG 42
++F + G+ S ++ +
Sbjct: 126 QLFLSSAVSGSGKFSFQDLKQV 147
Score = 27.1 bits (60), Expect = 0.23
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 45
FR++D N +G LS +EF E
Sbjct: 186 DLAALVADFRKIDTNSNGTLSRKEFREHFVR 216
Score = 24.4 bits (53), Expect = 2.4
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFI 40
PE K+F ++ + GR+S +
Sbjct: 156 PEGPLKKLFVMVENDTKGRMSYITLV 181
Score = 23.6 bits (51), Expect = 4.3
Identities = 4/41 (9%), Positives = 11/41 (26%)
Query: 7 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDP 47
++ + E+ + D+ E E +
Sbjct: 41 RLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAA 81
Score = 22.8 bits (49), Expect = 9.3
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
++ D ++ G+LS EE
Sbjct: 257 ILYAFADFDKSGQLSKEEV 275
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent
protein; HET: CZN; 1.60A {Aequorea victoria} SCOP:
a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 32.9 bits (75), Expect = 0.002
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 6 MKMPEDESTPEKRTD--KIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQCDP 57
K+ D P +F +D N +G++SL+E + A ++ L P
Sbjct: 3 SKLTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDI--VINNLGATP 54
Score = 30.9 bits (70), Expect = 0.010
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
++ FR D ++ G+L ++E
Sbjct: 148 EETFRVCDIDESGQLDVDEMTR 169
Score = 27.5 bits (61), Expect = 0.19
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 7 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ + D +F +DK+Q+G ++L+E+
Sbjct: 99 YAKNEPTLIRIWGDALFDIVDKDQNGAITLDEW 131
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP:
a.39.1.1
Length = 78
Score = 31.5 bits (72), Expect = 0.002
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
D +F+++DKN DG +S EEF
Sbjct: 50 DDLFQELDKNGDGEVSFEEFQ 70
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 32.8 bits (75), Expect = 0.003
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFIE 41
PE + +D + DG++ E +
Sbjct: 130 PEDLARQAAAALDTDGDGKVGETEIVP 156
Score = 30.9 bits (70), Expect = 0.010
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 16 EKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 45
E+R F D++ +G + +F AK+
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKA 32
Score = 28.2 bits (63), Expect = 0.11
Identities = 3/30 (10%), Positives = 8/30 (26%)
Query: 10 EDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
D + DG +++ +
Sbjct: 91 RFAEMARPFLHAALGVADTDGDGAVTVADT 120
Score = 27.0 bits (60), Expect = 0.23
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIEGAK 44
+ D++ D R++ EEF+ GA
Sbjct: 58 QGLAGIADRDGDQRITREEFVTGAV 82
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated,
SEN membrane targeting, EF-hand, cell projection,
cilium; 2.00A {Trypanosoma cruzi}
Length = 219
Score = 32.6 bits (74), Expect = 0.003
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 5 VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ E + +F+++DKN G ++ +EF
Sbjct: 155 AVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAA 191
Score = 30.2 bits (68), Expect = 0.018
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 7 KMPEDESTPEK-RTDKIFRQMDKNQDGRLSLEEFIEG 42
+P +++ K R ++F++ DKN+ G+L +E G
Sbjct: 37 AIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSG 73
Score = 26.0 bits (57), Expect = 0.61
Identities = 5/19 (26%), Positives = 11/19 (57%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
+F ++D + + + EEF
Sbjct: 134 VMFDEIDASGNMLVDEEEF 152
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 32.3 bits (74), Expect = 0.003
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEGAKS 45
++F ++D N +G LS E S
Sbjct: 43 ELFYKLDTNHNGSLSHREIYTVLAS 67
Score = 26.5 bits (59), Expect = 0.42
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFI 40
+ ++I + +D N G ++ EF+
Sbjct: 71 KKWDINRILQALDINDRGNITYTEFM 96
Score = 23.8 bits (52), Expect = 4.0
Identities = 7/39 (17%), Positives = 14/39 (35%), Gaps = 8/39 (20%)
Query: 11 DESTPEKRTDKIFRQMDKNQDG--------RLSLEEFIE 41
D+ D F + + G ++S +EF +
Sbjct: 136 DKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKD 174
Score = 22.6 bits (49), Expect = 9.5
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 23 FRQMDKNQDGRLSLEEF 39
F ++DK++DG +S +
Sbjct: 114 FNKIDKDEDGYISKSDI 130
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 31.8 bits (73), Expect = 0.004
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 6 MKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ + + ++ DK DK+ DGR+S EEF
Sbjct: 107 NNLKDTQL--QQIVDKTIINADKDGDGRISFEEFCA 140
Score = 25.7 bits (57), Expect = 0.70
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
K F+++D + G LS+EEF
Sbjct: 10 KRFKKLDLDNSGSLSVEEF 28
Score = 22.6 bits (49), Expect = 8.9
Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ G + + E++ FR D ++DG +S E
Sbjct: 61 IEGVSQFSVKGDK--EQKLRFAFRIYDMDKDGYISNGEL 97
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand,
helix-loop- helix, nervous system, metal binding
protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Length = 83
Score = 31.1 bits (71), Expect = 0.004
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
MV + ++ + K+ + DKN DG++S EEF+
Sbjct: 33 MVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLN 73
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 31.2 bits (71), Expect = 0.005
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
+ +F+++D ++DG ++ +EF G
Sbjct: 59 RPADAEAVFQRLDADRDGAITFQEFARG 86
Score = 28.1 bits (63), Expect = 0.076
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 6 MKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ + + R +F D N+ GRL EEF
Sbjct: 16 FQGADGDGEELARLRSVFAACDANRSGRLEREEF 49
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II,
calcium/phospholipid binding protein,
calcium-phospholipid protein complex; 2.25A {Homo
sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Length = 96
Score = 31.3 bits (71), Expect = 0.005
Identities = 8/40 (20%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 40
++ +D DKI + +D+ +DG++ + F
Sbjct: 37 EFPGFLENQKDPLA----VDKIMKDLDQCRDGKVGFQSFF 72
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein;
2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1
PDB: 1eg4_A
Length = 261
Score = 32.0 bits (72), Expect = 0.005
Identities = 7/43 (16%), Positives = 14/43 (32%), Gaps = 2/43 (4%)
Query: 12 ESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQ 54
S E F+ N + F++ + +P + L
Sbjct: 211 GSNIEPSVRSCFQFA--NNKPEIEAALFLDWMRLEPQSMVWLP 251
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100
protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2
PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Length = 100
Score = 31.3 bits (71), Expect = 0.005
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
+F + DKN+D ++ EF+
Sbjct: 55 ADVFEKKDKNEDKKIDFSEFL 75
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 31.5 bits (72), Expect = 0.006
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEGAKS 45
+ FRQ+D++ L +EF +G
Sbjct: 41 RFFRQLDRDGSRSLDADEFRQGLAK 65
Score = 25.4 bits (56), Expect = 1.0
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
+ + R+ D+N G L LEEF+
Sbjct: 76 EGVCRKWDRNGSGTLDLEEFLR 97
Score = 25.0 bits (55), Expect = 1.5
Identities = 6/39 (15%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ M + E F ++D++ DG +++++
Sbjct: 96 LRALRPPMSQA---REAVIAAAFAKLDRSGDGVVTVDDL 131
Score = 23.8 bits (52), Expect = 3.4
Identities = 8/31 (25%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 16 EKRTDKIFRQM-----DKNQDGRLSLEEFIE 41
E D++ R+ +DG+++L EF +
Sbjct: 147 EWTEDEVLRRFLDNFDSSEKDGQVTLAEFQD 177
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO,
EF-hand calcium binding proteins, S100 proteins,
protein dynamics, binding protein; 2.10A {Homo sapiens}
PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Length = 100
Score = 30.9 bits (70), Expect = 0.007
Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 40
+ ++ + DK+ + +D N DGR+S +E+
Sbjct: 43 ELNHMLSDTGNRKA----ADKLIQNLDANHDGRISFDEYW 78
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium
dependent kinase, structural genomics, structural GE
consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 31.1 bits (71), Expect = 0.008
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 4 TVM--KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEG 42
M K+ E T E +IFRQ+D N DG+L +E IEG
Sbjct: 27 LFMGSKLTTLEETKELT--QIFRQLDNNGDGQLDRKELIEG 65
Score = 29.6 bits (67), Expect = 0.035
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 11 DESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
++ ++ ++ DKN DG + EEF+E
Sbjct: 151 VTEVDDETWHQVLQECDKNNDGEVDFEEFVE 181
Score = 25.7 bits (57), Expect = 0.72
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
G + D S E D I + +D +++G + EF+
Sbjct: 74 GDTVSD-LDSSQIEAEVDHILQSVDFDRNGYIEYSEFVT 111
Score = 23.0 bits (50), Expect = 8.3
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 6 MKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ M + +R F+Q D + G+++ EE
Sbjct: 112 VCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL 145
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium
binding, EF-hand superfamily, S genomics, protein
structure initiative, PSI; 2.10A {Danio rerio} PDB:
2q4u_A
Length = 272
Score = 31.2 bits (70), Expect = 0.010
Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 2 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF--IEGAKSDP 47
+ +++ +K + + D N+DG++ E G K P
Sbjct: 225 MMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLGLKHKP 272
Score = 28.1 bits (62), Expect = 0.10
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 40
K + ++ TD + + DKN+DGRL L +
Sbjct: 134 FLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLA 171
Score = 25.0 bits (54), Expect = 1.5
Identities = 4/25 (16%), Positives = 13/25 (52%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEGAKS 45
+I++ D + +G + +E + +
Sbjct: 15 QIWQHFDADDNGYIEGKELDDFFRH 39
Score = 23.5 bits (50), Expect = 5.1
Identities = 8/40 (20%), Positives = 14/40 (35%)
Query: 6 MKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 45
+ ++ +KIF D ++ G L E K
Sbjct: 185 KMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKD 224
Score = 23.1 bits (49), Expect = 8.5
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 10 EDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
E KI+R+ D + G +S E
Sbjct: 97 EAPLDNSVEFMKIWRKYDADSSGYISAAEL 126
Score = 22.7 bits (48), Expect = 9.8
Identities = 7/32 (21%), Positives = 11/32 (34%)
Query: 10 EDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ ++ D DGRL +EE
Sbjct: 50 ITDERVQQIKKSFMSAYDATFDGRLQIEELAN 81
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom
consortium, SGC, ATP-binding; 1.15A {Plasmodium
falciparum} PDB: 3o4y_A
Length = 191
Score = 31.1 bits (71), Expect = 0.010
Identities = 5/25 (20%), Positives = 13/25 (52%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEGAKS 45
F +D++ G ++ E+ +G +
Sbjct: 56 STFLVLDEDGKGYITKEQLKKGLEK 80
Score = 29.1 bits (66), Expect = 0.043
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 11 DESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
R ++ R +DKN DG++ EF E
Sbjct: 157 ITQRDVNRVKRMIRDVDKNNDGKIDFHEFSE 187
Score = 25.7 bits (57), Expect = 0.82
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 40
++ D D + Q+D + G++ EFI
Sbjct: 75 KKGLEK--DGLKLPYNFDLLLDQIDSDGSGKIDYTEFI 110
Score = 23.7 bits (52), Expect = 4.6
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 5 VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ + + +K FR D + DG ++ E
Sbjct: 110 IAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAEL 144
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response,
metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A*
2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Length = 95
Score = 30.1 bits (68), Expect = 0.012
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
D+IF+ +D NQD ++ +EFI
Sbjct: 58 DEIFQGLDANQDEQVDFQEFI 78
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer,
X-type four-helix bundle, metal binding protein; NMR
{Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A
2kbm_A 2l0p_A 2jpt_A
Length = 93
Score = 30.1 bits (68), Expect = 0.012
Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 2 VGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 40
+ + + + +D DKI +++D+N DG + +EF+
Sbjct: 41 LSSFLDVQKDADA----VDKIMKELDENGDGEVDFQEFV 75
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 30.1 bits (68), Expect = 0.013
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFI 40
P I+ D G+LS ++F
Sbjct: 42 PSTLLAHIWSLCDTKDCGKLSKDQFA 67
Score = 28.5 bits (64), Expect = 0.053
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 14 TPEKRT--DKIFRQMDKNQDGRLSLEE 38
+P ++ D+IF + DK+ DG +S E
Sbjct: 5 SPAEKAKYDEIFLKTDKDMDGFVSGLE 31
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein;
2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A
2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Length = 106
Score = 30.2 bits (68), Expect = 0.016
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
D+ + +D NQD L E+
Sbjct: 65 DEKMKSLDVNQDSELKFNEYW 85
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix,
structural genomics, protein structure initiative; NMR
{Arabidopsis thaliana} SCOP: a.39.1.5
Length = 67
Score = 29.0 bits (66), Expect = 0.019
Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
V ++ K F ++D + +G L+ +EF
Sbjct: 24 REVALAF-SPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
Score = 28.2 bits (64), Expect = 0.040
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEGAKS 45
++F + DKN+DG+LSL+EF E A +
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALA 29
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR
{Rattus norvegicus} PDB: 2g9b_A
Length = 263
Score = 30.2 bits (68), Expect = 0.021
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 40
D++ + TD + + D N DG+L L E
Sbjct: 133 LEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMA 170
Score = 26.0 bits (57), Expect = 0.57
Identities = 4/35 (11%), Positives = 9/35 (25%)
Query: 7 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ Q + DG++ + E
Sbjct: 48 ARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAH 82
Score = 26.0 bits (57), Expect = 0.73
Identities = 7/43 (16%), Positives = 15/43 (34%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 45
++ + + K +R+ D + G + EE K
Sbjct: 89 NFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKD 131
Score = 25.6 bits (56), Expect = 1.1
Identities = 6/34 (17%), Positives = 13/34 (38%)
Query: 6 MKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ + K +K F D++ +G + E
Sbjct: 180 LLKFQGIKMCGKEFNKAFELYDQDGNGYIDENEL 213
Score = 24.4 bits (53), Expect = 2.7
Identities = 5/18 (27%), Positives = 9/18 (50%)
Query: 21 KIFRQMDKNQDGRLSLEE 38
+I+ D + G L +E
Sbjct: 20 EIWLHFDADGSGYLEGKE 37
Score = 22.9 bits (49), Expect = 7.5
Identities = 4/29 (13%), Positives = 8/29 (27%)
Query: 11 DESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
E + M + G+L +
Sbjct: 226 QELDINNISTYKKNIMALSDGGKLYRTDL 254
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand,
EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB:
2jxc_A 1f8h_A 1ff1_A
Length = 106
Score = 29.8 bits (67), Expect = 0.021
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFI 40
P +++ D + DG L +EF
Sbjct: 46 PVDILGRVWELSDIDHDGMLDRDEFA 71
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A
{Plasmodium falciparum K1}
Length = 197
Score = 29.9 bits (68), Expect = 0.023
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEG 42
IF +D + G LS +E ++G
Sbjct: 61 NIFIALDVDNSGTLSSQEILDG 82
Score = 28.7 bits (65), Expect = 0.058
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 11 DESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ +K D + +++D N DG + EF+
Sbjct: 161 ENPLIDKAIDSLLQEVDLNGDGEIDFHEFML 191
Score = 23.7 bits (52), Expect = 3.7
Identities = 5/22 (22%), Positives = 12/22 (54%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
++ R +D N G++ +F+
Sbjct: 96 HQVLRDIDSNASGQIHYTDFLA 117
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding
protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2
PDB: 1mr8_A
Length = 93
Score = 29.4 bits (66), Expect = 0.023
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 16 EKRTDKIFRQMDKNQDGRLSLEEFI 40
+K D F+++D N DG ++ +EF+
Sbjct: 48 KKGADVWFKELDINTDGAVNFQEFL 72
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural
genomics, PSI-B protein structure initiative, NEW YORK
structural genomics consortium; 1.54A {Homo sapiens}
PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Length = 93
Score = 29.4 bits (66), Expect = 0.025
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
K+ +D N+D + +E+
Sbjct: 56 QKLMSNLDSNRDNEVDFQEYC 76
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 29.4 bits (66), Expect = 0.027
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFI 40
P+ + I+ D +QDG+L+ EEFI
Sbjct: 46 PQAQLASIWNLSDIDQDGKLTAEEFI 71
Score = 26.7 bits (59), Expect = 0.31
Identities = 6/27 (22%), Positives = 10/27 (37%), Gaps = 2/27 (7%)
Query: 14 TPEKRT--DKIFRQMDKNQDGRLSLEE 38
R ++F DK G L+ +
Sbjct: 9 PQSSRLKYRQLFNSHDKTMSGHLTGPQ 35
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 29.4 bits (67), Expect = 0.033
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEGAKS 45
+F+++D N DG +S EE
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVSK 28
Score = 27.1 bits (61), Expect = 0.22
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
+ + D N DG ++LEEF+E
Sbjct: 110 AEQVMKADANGDGYITLEEFLE 131
Score = 25.2 bits (56), Expect = 1.2
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 7 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEE 38
+D S + +++ MD + DG+L+ EE
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE 96
Score = 24.4 bits (54), Expect = 2.3
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
IF+ +D + +G + EF +
Sbjct: 39 QLIFKSIDADGNGEIDQNEFAK 60
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding
protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2
PDB: 1irj_A*
Length = 113
Score = 29.1 bits (65), Expect = 0.037
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 10 EDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 40
+ E+ EK + I +D N D +LS EEFI
Sbjct: 49 KKENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium
binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Length = 108
Score = 28.8 bits (65), Expect = 0.039
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 9 PEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
T D + DG++ EEF E
Sbjct: 72 SGARVLTASETKTFLAAADHDGDGKIGAEEFQE 104
Score = 25.3 bits (56), Expect = 0.76
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 21 KIFRQMDKNQDGRLSLEE 38
+IFR +D +Q G + +E
Sbjct: 45 EIFRILDNDQSGFIEEDE 62
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform
A; EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 29.0 bits (65), Expect = 0.041
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
D+++ +M N GRL +F+
Sbjct: 63 DRLWNEMPVNAKGRLKYPDFLS 84
Score = 27.8 bits (62), Expect = 0.099
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
+ F D + +S EEF
Sbjct: 28 QEFENFDTMKTNTISREEF 46
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2,
protein structure initiative, northeast structural
genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Length = 121
Score = 29.0 bits (65), Expect = 0.044
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFI 40
P+ +I+ D N DGR+ EF
Sbjct: 64 PQPVLAQIWALADMNNDGRMDQVEFS 89
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1ozo_A
Length = 95
Score = 28.6 bits (64), Expect = 0.047
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 40
++ +D+ DK+ + +D N D ++ EFI
Sbjct: 42 PGFLQSGKDKDA----VDKLLKDLDANGDAQVDFSEFI 75
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 29.3 bits (66), Expect = 0.047
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 6 MKMPEDESTPEKRTD--KIFRQMDKNQDGRLSLEEFIEGAKSD 46
+K+ D P +F +D N +G+++L+E + A D
Sbjct: 7 VKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDD 49
Score = 27.8 bits (62), Expect = 0.14
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
+ FR D + G L ++E
Sbjct: 152 EATFRHCDLDNAGDLDVDEMTR 173
Score = 25.1 bits (55), Expect = 1.5
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 10 EDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ + + D +F DK+ G ++L+E+
Sbjct: 106 NEPTLIREWGDAVFDIFDKDGSGTITLDEW 135
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium,
polymorphism, structural genomics, spine2, structural
proteomics in europe, spine; NMR {Homo sapiens} PDB:
2kay_A
Length = 92
Score = 28.6 bits (64), Expect = 0.048
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
D + + +DKN D + +E+
Sbjct: 53 DDLMKSLDKNSDQEIDFKEYS 73
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100
family, EF-hand protein, complex (ligand/annexin),
ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2
PDB: 1nsh_A
Length = 99
Score = 28.7 bits (64), Expect = 0.051
Identities = 8/40 (20%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 40
+ + +D D++ +++D + DG+L +EF+
Sbjct: 44 ELAAFTQNQKDPGV----LDRMMKKLDLDSDGQLDFQEFL 79
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein,
EF-hand, calcium regulation, oligomer neuronal
development, spine2; 2.03A {Danio rerio}
Length = 99
Score = 28.6 bits (64), Expect = 0.052
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 40
+ +D +KI +D N+D + EF+
Sbjct: 43 TDFLMSQKDPMLV----EKIMNDLDSNKDNEVDFNEFV 76
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation,
calcium, metal binding protein; 1.95A {Gallus gallus}
PDB: 2kqy_A
Length = 109
Score = 28.8 bits (65), Expect = 0.053
Identities = 7/33 (21%), Positives = 11/33 (33%)
Query: 9 PEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
T D + DG++ +EEF
Sbjct: 73 SSARVLTSAETKAFLAAGDTDGDGKIGVEEFQS 105
Score = 23.8 bits (52), Expect = 3.4
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 21 KIFRQMDKNQDGRLSLEE 38
K+F +D+++ G + EE
Sbjct: 46 KVFGILDQDKSGFIEEEE 63
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand
(helix-loop-helix) calcium binding protein, four-HEL
domain, protein engineering; HET: FME; 1.44A {Bos
taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A
1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A
1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Length = 76
Score = 28.0 bits (63), Expect = 0.057
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 3 GTVMKMPEDESTPEKRT-DKIFRQMDKNQDGRLSLEEFIE 41
VM+ T D++ ++DKN DG +S EEF+
Sbjct: 30 KLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLV 69
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding
protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A
1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X*
3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A*
3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Length = 92
Score = 28.2 bits (63), Expect = 0.058
Identities = 8/40 (20%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 40
+ ++ +++ DK+ +D N DG +EF+
Sbjct: 40 ELSHFLEEIKEQEV----VDKVMETLDSNGDGECDFQEFM 75
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor
supressor, CAL binding protein; 1.30A {Homo sapiens}
PDB: 2rgi_A 4duq_A
Length = 98
Score = 28.3 bits (63), Expect = 0.059
Identities = 5/21 (23%), Positives = 12/21 (57%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
K+ +D+N D ++ +E+
Sbjct: 57 KKLMGSLDENSDQQVDFQEYA 77
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+)
requirement, hydrolase chimera; 2.80A {Rattus
norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Length = 900
Score = 29.0 bits (64), Expect = 0.068
Identities = 7/23 (30%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Query: 21 KIFRQMDKNQDG--RLSLEEFIE 41
+ FR +DKN G +++++E+++
Sbjct: 873 RAFRSLDKNGTGQIQVNIQEWLQ 895
Score = 25.5 bits (55), Expect = 1.0
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 26 MDKNQDGRLSLEEF 39
MD + G+L EEF
Sbjct: 783 MDSDTTGKLGFEEF 796
Score = 23.2 bits (49), Expect = 7.3
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
IFR+ D ++ G +S E
Sbjct: 611 TIFRKFDLDKSGSMSAYEM 629
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP:
a.39.1.4
Length = 109
Score = 28.4 bits (64), Expect = 0.069
Identities = 5/26 (19%), Positives = 12/26 (46%)
Query: 16 EKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ T + D + DG + ++E+
Sbjct: 80 DAETKAFLKAGDSDGDGAIGVDEWAA 105
Score = 25.7 bits (57), Expect = 0.72
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 7/38 (18%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEE 38
VG K +D K F +D+++ G + +E
Sbjct: 33 KVGLTAKSADDIK-------KAFFVIDQDKSGFIEEDE 63
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell
membrane, hydrolase, MEMB protease, thiol protease,
phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A
1df0_A 1u5i_A 1kfu_L 1kfx_L
Length = 714
Score = 29.0 bits (64), Expect = 0.069
Identities = 8/23 (34%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Query: 21 KIFRQMDKNQDG--RLSLEEFIE 41
KIF+Q+D G +L L ++
Sbjct: 674 KIFKQLDPENTGTIQLDLISWLS 696
Score = 23.6 bits (50), Expect = 5.8
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 22 IFRQMDKNQDGRLSLEEF 39
+ +D++ G+L L+EF
Sbjct: 580 MVDMLDEDGSGKLGLKEF 597
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding
protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A
3nsl_A
Length = 101
Score = 28.3 bits (63), Expect = 0.071
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
+K +D N+D + E++
Sbjct: 56 NKFMSVLDTNKDCEVDFVEYV 76
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium,
RAS signal transduction, endocytosis/exocytosis
complex; NMR {Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 28.1 bits (63), Expect = 0.076
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFI 40
P I+ D ++DG L+L+EF
Sbjct: 41 PILELSHIWELSDFDKDGALTLDEFC 66
Score = 27.0 bits (60), Expect = 0.21
Identities = 5/27 (18%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 14 TPEKRT--DKIFRQMDKNQDGRLSLEE 38
T E+R F+ + + +G +
Sbjct: 4 TDEQRQYYVNQFKTIQPDLNGFIPGSA 30
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100
proteins, EF-; 1.94A {Homo sapiens}
Length = 104
Score = 28.3 bits (63), Expect = 0.077
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
K+ +D N+D + +E+
Sbjct: 59 QKLMSNLDSNRDNEVDFQEYC 79
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium
free, signaling protein; HET: MSE; 1.15A {Homo sapiens}
SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A
1jwd_A 2cnp_A 2jtt_A
Length = 90
Score = 27.8 bits (62), Expect = 0.081
Identities = 4/21 (19%), Positives = 14/21 (66%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
++ +D+N+D ++ +E++
Sbjct: 54 ARLMEDLDRNKDQEVNFQEYV 74
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15,
EPS15; EH domain, EF-hand, solution structure, S100
protein; NMR {Mus musculus} SCOP: a.39.1.6
Length = 99
Score = 27.9 bits (62), Expect = 0.089
Identities = 5/35 (14%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 8 MPEDESTPEKRT-DKIFRQMDKNQDGRLSLEEFIE 41
+ + + +K +RQ++ GR+ +
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAA 35
Score = 22.8 bits (49), Expect = 6.7
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 27 DKNQDGRLSLEEFI 40
D + G LS +EF
Sbjct: 55 DTDGKGVLSKQEFF 68
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand,
structural genomics, seattle S genomics center for
infectious disease, ssgcid; 1.90A {Entamoeba
histolytica} PDB: 3sia_A 3sib_A
Length = 220
Score = 28.2 bits (63), Expect = 0.090
Identities = 8/31 (25%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 8 MPEDESTPEKRTDKIFRQMDKNQDGRLSLEE 38
+P D+ T + F +D+++ G L + E
Sbjct: 45 IPLDQYTRIYQ---WFMGVDRDRSGTLEINE 72
Score = 27.1 bits (60), Expect = 0.30
Identities = 4/19 (21%), Positives = 7/19 (36%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
+F + + G L E
Sbjct: 121 NLFVMNARARSGTLEPHEI 139
Score = 26.7 bits (59), Expect = 0.42
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 21 KIFRQMDKNQDGRLSLEEFIE 41
++ R D + +G +S EF+
Sbjct: 91 RMMRIFDTDFNGHISFYEFMA 111
Score = 24.0 bits (52), Expect = 3.5
Identities = 4/24 (16%), Positives = 8/24 (33%)
Query: 18 RTDKIFRQMDKNQDGRLSLEEFIE 41
RT + ++ L +I
Sbjct: 153 RTSLLLHRLFARGMAFCDLNCWIA 176
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal
binding protein, binding protein; NMR {Homo sapiens}
PDB: 3c1v_A
Length = 113
Score = 28.0 bits (62), Expect = 0.090
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
K+ +D N+D + +E+
Sbjct: 68 QKLMSNLDSNRDNEVDFQEYC 88
>3a8r_A Putative uncharacterized protein; EF-hand, membrane,
oxidoreductase, transmembrane, calcium BI protein; 2.40A
{Oryza sativa japonica group}
Length = 179
Score = 28.5 bits (63), Expect = 0.095
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 13 STPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQCDPQ 58
+ R F +DKN DGRL+ EE E S +L + +
Sbjct: 94 QGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKER 139
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding
protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A
2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A
1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Length = 108
Score = 27.9 bits (63), Expect = 0.096
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 9 PEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
P + + T DK+ DG + ++EF
Sbjct: 72 PSARALTDAETKAFLADGDKDGDGMIGVDEFAA 104
Score = 22.5 bits (49), Expect = 9.9
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 21 KIFRQMDKNQDGRLSLEE 38
K F +D+++ G + +E
Sbjct: 45 KAFYVIDQDKSGFIEEDE 62
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases,
like, EF-hand, structural genomics, structural genomics
CON SGC, hydrolase; 1.80A {Homo sapiens}
Length = 174
Score = 28.4 bits (63), Expect = 0.10
Identities = 7/22 (31%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Query: 21 KIFRQMDKNQDG-RLSLEEFIE 41
K FR + K+ G L+ E++
Sbjct: 148 KTFRNLSKDGKGLYLTEMEWMS 169
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal
binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8
PDB: 1k95_A 1f4q_A 1f4o_A
Length = 165
Score = 28.1 bits (63), Expect = 0.11
Identities = 7/25 (28%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Query: 21 KIFRQMDKNQDGR--LSLEEFIEGA 43
FR+ D Q G ++F++G
Sbjct: 138 DFFRKRDHLQQGSANFIYDDFLQGT 162
Score = 24.2 bits (53), Expect = 2.3
Identities = 4/16 (25%), Positives = 9/16 (56%)
Query: 26 MDKNQDGRLSLEEFIE 41
+D++ G++ F E
Sbjct: 49 LDRDHTGKMGFNAFKE 64
Score = 23.9 bits (52), Expect = 3.2
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
+ F +D++ G + E
Sbjct: 74 ENFMTVDQDGSGTVEHHEL 92
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1;
calmodulin-like domain, EF calcium binding protein,
transferase; 2.00A {Arabidopsis thaliana}
Length = 166
Score = 27.9 bits (63), Expect = 0.12
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEGAKS 45
++F +D ++ G+++ EE G K
Sbjct: 31 EMFNMIDADKSGQITFEELKAGLKR 55
Score = 27.5 bits (62), Expect = 0.19
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
+++ R +D++ DGR+ EF+
Sbjct: 136 EELMRDVDQDNDGRIDYNEFVA 157
Score = 23.6 bits (52), Expect = 4.7
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 6 MKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEE 38
+ ++ E F DK+ G ++ +E
Sbjct: 88 ATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP:
a.39.1.10
Length = 78
Score = 27.1 bits (61), Expect = 0.14
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 51
++ ++D + DG + EFI ++P +++
Sbjct: 41 QRMMAEIDTDGDGFIDFNEFISFCNANPGLMK 72
Score = 22.5 bits (49), Expect = 6.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 21 KIFRQMDKNQDGRLSLEE 38
+IF++ D N DG++SL E
Sbjct: 7 RIFKRFDTNGDGKISLSE 24
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus}
SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 27.2 bits (61), Expect = 0.15
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 16 EKRTDKIFRQMDKNQDGRLSLEEFIE 41
E T + D + DG++ +EF E
Sbjct: 79 ESETKSLMDAADNDGDGKIGADEFQE 104
Score = 26.5 bits (59), Expect = 0.32
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 21 KIFRQMDKNQDGRLSLEE 38
IFR +D +Q G L +E
Sbjct: 45 DIFRFIDNDQSGYLDGDE 62
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme
delta1; phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 28.0 bits (61), Expect = 0.16
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
R+ DKN+D +++ +E
Sbjct: 15 SCLRKADKNKDNKMNFKEL 33
Score = 26.0 bits (56), Expect = 0.70
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ KIFR+ D +Q L EE
Sbjct: 45 DDGYARKIFRECDHSQTDSLEDEEIET 71
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo
sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Length = 153
Score = 27.5 bits (62), Expect = 0.16
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 5 VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
M+ + ++I R +D N DGR+ EEF+
Sbjct: 113 AMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 149
Score = 26.0 bits (58), Expect = 0.52
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 45
++G + + K FR+ D N DG +S E E ++
Sbjct: 72 LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRA 116
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain,
POB1 EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 27.4 bits (61), Expect = 0.17
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFI 40
I+ D + DG L+L EF
Sbjct: 54 SIPELSYIWELSDADCDGALTLPEFC 79
Score = 25.9 bits (57), Expect = 0.50
Identities = 6/27 (22%), Positives = 10/27 (37%), Gaps = 2/27 (7%)
Query: 14 TPEKRT--DKIFRQMDKNQDGRLSLEE 38
T E+R FR + + +S
Sbjct: 17 TEEQREYYVNQFRSLQPDPSSFISGSV 43
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding
protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP:
a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A
1rk9_A 1g33_A
Length = 109
Score = 27.3 bits (61), Expect = 0.17
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 12 ESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
K T + DK+ DG++ +EEF
Sbjct: 75 RDLSAKETKTLMAAGDKDGDGKIGVEEFST 104
Score = 25.7 bits (57), Expect = 0.65
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEGAKS 45
K+F +DK++ G + +E K
Sbjct: 45 KVFHILDKDKSGFIEEDELGSILKG 69
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 27.1 bits (61), Expect = 0.17
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEGAKS 45
++F+ +D + G ++ +E +G K
Sbjct: 27 ELFKMIDTDNSGTITFDELKDGLKR 51
Score = 22.9 bits (50), Expect = 6.9
Identities = 7/38 (18%), Positives = 12/38 (31%), Gaps = 1/38 (2%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFI 40
+K E + D ++ G + EFI
Sbjct: 46 KDGLKR-VGSELMESEIKDLMDAADIDKSGTIDYGEFI 82
>1nub_A Basement membrane protein BM-40; extracellular module,
glycoprotein, anti-adhesive protein, C binding,
site-directed mutagenesis; HET: NAG; 2.80A {Homo
sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A*
1bmo_A*
Length = 229
Score = 27.6 bits (60), Expect = 0.17
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEF 39
E T + F D + D ++L+E+
Sbjct: 188 MEHCTTRFFETCDLDNDKYIALDEW 212
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain,
EF-SAM, STIM1, store operated calcium entry regulator,
SOCE; NMR {Homo sapiens}
Length = 150
Score = 27.7 bits (61), Expect = 0.18
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEE 38
G+ M EDE + I + MD + +G + +EE
Sbjct: 1 GSHMASSEDEKLSFEAVRNIHKLMDDDANGDVDVEE 36
>2hp0_A IDS-epimerase; MMGE/PRPD fold, 6 helix bundle, chorismate mutase
like, ISOM; HET: MSE CSO; 1.50A {Agrobacterium
tumefaciens} PDB: 2hp3_A*
Length = 466
Score = 27.4 bits (61), Expect = 0.19
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 30 QDGRLSLEEFIEGAKSDPSIVRLLQ 54
DG +SL F P++ ++
Sbjct: 354 LDGEVSLASFEIEHLDRPAMRAAMK 378
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata}
SCOP: a.39.1.4
Length = 109
Score = 26.8 bits (60), Expect = 0.23
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 9 PEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ T + D + DG++ +EF +
Sbjct: 72 AHGRDLNDTETKALLAAGDSDHDGKIGADEFAK 104
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4
PDB: 2pas_A 3pat_A
Length = 110
Score = 26.8 bits (60), Expect = 0.23
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 16 EKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ T + DK+ DG++ ++EF
Sbjct: 80 DAETKAFLKAADKDGDGKIGIDEFET 105
Score = 22.5 bits (49), Expect = 9.6
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 21 KIFRQMDKNQDGRLSLEE 38
K+F+ +D + G + EE
Sbjct: 46 KVFKAIDADASGFIEEEE 63
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE
calcium entry, signaling protein; NMR {Homo sapiens}
Length = 150
Score = 27.3 bits (60), Expect = 0.23
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEE 38
G+ M E++ + I +QMD ++DG + +EE
Sbjct: 1 GSHMASTEEDRFSLEALQTIHKQMDDDKDGGIEVEE 36
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 27.2 bits (61), Expect = 0.26
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
D + +++D++ DG++ EF
Sbjct: 119 DDMIKEIDQDNDGQIDYGEFAA 140
Score = 26.0 bits (58), Expect = 0.55
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEGAKS 45
++F+ +D + G ++ +E +G K
Sbjct: 14 ELFKMIDTDNSGTITFDELKDGLKR 38
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding,
phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Length = 167
Score = 27.0 bits (60), Expect = 0.30
Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 17 KRTDKIFRQMDKNQDGR--LSLEEFIE 41
+ FR+ D Q G S ++FI+
Sbjct: 136 RALTDSFRRRDSAQQGMVNFSYDDFIQ 162
Score = 24.3 bits (53), Expect = 2.3
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 26 MDKNQDGRLSLEEFIE 41
+D++ G + EF E
Sbjct: 51 LDRDMSGTMGFNEFKE 66
Score = 23.9 bits (52), Expect = 3.5
Identities = 7/38 (18%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 21 KIFRQMDKNQDGRLSLEEFIE-----GAKSDPSIVRLL 53
+ F D ++ G + +E + G + +P V +
Sbjct: 76 QHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSI 113
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal
transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB:
2jc2_A
Length = 198
Score = 26.7 bits (59), Expect = 0.32
Identities = 7/27 (25%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 17 KRTDKIFRQMDKNQDGR--LSLEEFIE 41
+ FR+ D Q G ++FI+
Sbjct: 167 RALTDSFRRRDTAQQGVVNFPYDDFIQ 193
Score = 24.7 bits (54), Expect = 2.1
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 26 MDKNQDGRLSLEEFIE 41
+D++ G + EF E
Sbjct: 82 LDRDMSGTMGFNEFKE 97
Score = 23.2 bits (50), Expect = 5.5
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
+ F D ++ G + +E
Sbjct: 107 QHFISFDTDRSGTVDPQEL 125
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Length = 81
Score = 26.0 bits (58), Expect = 0.36
Identities = 6/39 (15%), Positives = 21/39 (53%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+M+ +E + ++ ++ D++ +G + + EF++
Sbjct: 31 KFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMD 69
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo
sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Length = 139
Score = 26.4 bits (58), Expect = 0.38
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFI 40
P KI++ D ++DG L EEF
Sbjct: 82 PNTVLGKIWKLADVDKDGLLDDEEFA 107
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of
cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB:
1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S
3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Length = 173
Score = 26.6 bits (59), Expect = 0.41
Identities = 5/28 (17%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 16 EKRTDKIFRQMDKNQDGR--LSLEEFIE 41
+ F+ +DK+ G+ ++++E+++
Sbjct: 141 LDAMFRAFKSLDKDGTGQIQVNIQEWLQ 168
Score = 24.3 bits (53), Expect = 2.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 26 MDKNQDGRLSLEEFIE 41
MD + G+L EEF
Sbjct: 56 MDSDTTGKLGFEEFKY 71
Score = 22.8 bits (49), Expect = 9.8
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
I++Q D ++ G + E
Sbjct: 81 AIYKQFDVDRSGTIGSSEL 99
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium
binding protein, apoptosis, calcium, endoplasmic
reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB:
2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Length = 172
Score = 26.4 bits (59), Expect = 0.42
Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Query: 21 KIFRQMDKNQDGR--LSLEEFIE 41
IFR+ D +QDG +S E+++
Sbjct: 144 DIFRRYDTDQDGWIQVSYEQYLS 166
Score = 26.4 bits (59), Expect = 0.48
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
D + R+ D+ G+++ ++FI+
Sbjct: 113 DILIRKFDRQGRGQIAFDDFIQ 134
Score = 26.0 bits (58), Expect = 0.58
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
+FR D++ G + E
Sbjct: 78 NVFRTYDRDNSGMIDKNEL 96
Score = 24.9 bits (55), Expect = 1.7
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 21 KIFRQMDKNQDGRLSLEE 38
+F+++DK++ G +S E
Sbjct: 11 NVFQRVDKDRSGVISDTE 28
Score = 23.3 bits (51), Expect = 6.2
Identities = 3/16 (18%), Positives = 6/16 (37%)
Query: 26 MDKNQDGRLSLEEFIE 41
D+ ++ EF
Sbjct: 53 FDRENKAGVNFSEFTG 68
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT
calmodulin chimera; calcium sensor, fluorescent protein;
HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A*
3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A*
3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 26.4 bits (58), Expect = 0.47
Identities = 8/22 (36%), Positives = 17/22 (77%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
D++ R+ D + DG+++ EEF++
Sbjct: 424 DEMIREADIDGDGQVNYEEFVQ 445
Score = 24.9 bits (54), Expect = 1.8
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+GTVM+ T E + ++D + +G + EF+
Sbjct: 333 ELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLT 372
Score = 24.1 bits (52), Expect = 3.5
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 7 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 45
KM + +S E R + FR DK+ +G +S E +
Sbjct: 377 KMKDTDSEEEIR--EAFRVFDKDGNGYISAAELRHVMTN 413
>1szq_A 2-methylcitrate dehydratase; propionate catabolism, 2-methylcitric
acid cycle structural genomics target, NYSGXRC, PSI;
2.70A {Escherichia coli} SCOP: e.44.1.1
Length = 483
Score = 26.5 bits (58), Expect = 0.51
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 31 DGRLSLEEFIEGAKSDPSIVRLLQ 54
GRL+ ++ + D I L +
Sbjct: 358 FGRLTAADYEDNVAQDKRIDALRE 381
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP,
structural genomics, PSI; 1.95A {Leishmania major} SCOP:
a.39.1.8
Length = 191
Score = 26.1 bits (58), Expect = 0.53
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
+ R+ D+ + G L ++++E
Sbjct: 132 QALMRKFDRQRRGSLGFDDYVE 153
Score = 25.7 bits (57), Expect = 0.75
Identities = 6/25 (24%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 21 KIFRQMDKNQDGR--LSLEEFIEGA 43
+F D+ + G+ + + FI G+
Sbjct: 163 NVFAFYDRERTGQVTFTFDTFIGGS 187
Score = 25.3 bits (56), Expect = 1.0
Identities = 7/36 (19%), Positives = 13/36 (36%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEE 38
V + + FR +D + G +S+ E
Sbjct: 13 TGVYAPSARHMNDNQELMEWFRAVDTDGSGAISVPE 48
Score = 23.8 bits (52), Expect = 3.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 21 KIFRQMDKNQDGRLSLEEF 39
+ FR+ D + DGRL E
Sbjct: 97 EGFRKRDSSGDGRLDSNEV 115
Score = 22.6 bits (49), Expect = 9.9
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 21 KIFRQMDKNQDGRLSLEEFIE 41
K+ DKN G ++ +EF +
Sbjct: 67 KLLHMYDKNHSGEITFDEFKD 87
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A
1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A
2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Length = 162
Score = 25.6 bits (57), Expect = 0.72
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 16 EKRTDKIFRQM----DKNQDGRLSLEEFIE 41
E T++ + DKN DGR+ +EF++
Sbjct: 127 EHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light
chain, cell cycle protein; 1.65A {Saccharomyces
cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A
2fce_A
Length = 148
Score = 25.6 bits (57), Expect = 0.78
Identities = 7/35 (20%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Query: 7 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
K+ + E D++ + ++ + +G + ++FIE
Sbjct: 115 KLTDAE------VDELLKGVEVDSNGEIDYKKFIE 143
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding,
ME binding protein-toxin complex; 2.20A {Chlamydomonas
reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Length = 169
Score = 25.6 bits (57), Expect = 0.82
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Query: 16 EKRTDKIFRQM----DKNQDGRLSLEEFIE 41
E T++ ++M D+N D + +EFI
Sbjct: 132 ENLTEEELQEMIAEADRNDDNEIDEDEFIR 161
Score = 23.7 bits (52), Expect = 4.7
Identities = 8/36 (22%), Positives = 16/36 (44%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
T+M E + K FR D + G +++++
Sbjct: 88 TMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDL 123
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle,
myosin subfragment 2, heavy meromyosin, essential light
chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 25.4 bits (56), Expect = 0.90
Identities = 3/22 (13%), Positives = 12/22 (54%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
D+ + + +G + +++F +
Sbjct: 164 DQALSEAPIDGNGLIDIKKFAQ 185
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal
binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Length = 147
Score = 25.6 bits (56), Expect = 0.92
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 6 MKMPEDESTPEKRTD--KIFRQMDKNQDGRLSLEE 38
K DE P K + + D N +G + +
Sbjct: 35 PKYSNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMS 69
Score = 22.9 bits (49), Expect = 7.9
Identities = 3/22 (13%), Positives = 10/22 (45%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
++ R++ + S +F+
Sbjct: 87 KRLIREVSSGSEETFSYSDFLR 108
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide
compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB:
3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Length = 143
Score = 25.5 bits (57), Expect = 0.97
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 16 EKRTDKIFRQM----DKNQDGRLSLEEFIE 41
E TD+ ++M D++ DG +S +EF+
Sbjct: 110 ENLTDEELQEMIDEADRDGDGEVSEQEFLR 139
Score = 23.2 bits (51), Expect = 6.0
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
TVM E ++ K F+ D ++ G++S +
Sbjct: 66 TVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNL 101
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin;
EF-hands, calcium, metal binding protein; 2.17A {Bos
taurus} PDB: 2f2p_A
Length = 179
Score = 25.2 bits (56), Expect = 1.0
Identities = 8/22 (36%), Positives = 17/22 (77%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
D++ R+ D + DG+++ EEF++
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQ 144
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially
structured protein, CAM-like; NMR {Entamoeba
histolytica} PDB: 2lc5_A
Length = 85
Score = 24.9 bits (55), Expect = 1.1
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
GTVM+ T +K +I + DK+ G+ E F+
Sbjct: 37 GTVMRALGANPTKQK-ISEIVKDYDKDNSGKFDQETFLT 74
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP;
2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A
2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A*
1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A*
3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Length = 161
Score = 25.2 bits (56), Expect = 1.1
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 16 EKRTDKIFRQM----DKNQDGRLSLEEFIE 41
E T+ ++ DKN DGR+ +EF+E
Sbjct: 126 ETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 22.9 bits (50), Expect = 7.4
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 10 EDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 45
+ + E+ +FR DKN DG + LEE ++
Sbjct: 88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQA 123
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle,
cell division, mitosis, MR transport, nuclear pore
complex, nucleus, phosphoprotein; 2.50A {Saccharomyces
cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A
Length = 161
Score = 25.2 bits (56), Expect = 1.1
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
+ + D + DG ++ EFI
Sbjct: 135 RAMIEEFDLDGDGEINENEFIA 156
Score = 24.0 bits (53), Expect = 3.5
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
VM + P + F+ D + G++S++
Sbjct: 83 IVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNL 118
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein,
regulation, complex, calcium, EF- hand, calmodulin,
ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis
thaliana}
Length = 135
Score = 25.4 bits (56), Expect = 1.1
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 5 VMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ E ++ + R+ D + DG L+ EF
Sbjct: 65 NSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCV 101
Score = 23.1 bits (50), Expect = 7.7
Identities = 6/36 (16%), Positives = 10/36 (27%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
VM D K F + + ++ E
Sbjct: 27 PVMAEKMDVEEFVSELCKGFSLLADPERHLITAESL 62
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin
V, chicken, molecular motor, ATPase, ELC, IQ motif,
muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens}
SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B*
1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Length = 151
Score = 25.2 bits (56), Expect = 1.1
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
M+ V K + + + FR DK +G++ E
Sbjct: 73 MLQAVAKNRGQGTYEDYL--EGFRVFDKEGNGKVMGAEL 109
Score = 23.7 bits (52), Expect = 3.6
Identities = 6/29 (20%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 16 EKRTDKIFRQM---DKNQDGRLSLEEFIE 41
EK T++ + ++ +G ++ E F++
Sbjct: 118 EKMTEEEVETVLAGHEDSNGCINYEAFLK 146
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal
binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Length = 158
Score = 25.2 bits (56), Expect = 1.2
Identities = 7/30 (23%), Positives = 12/30 (40%), Gaps = 4/30 (13%)
Query: 16 EKRTDKIFRQM----DKNQDGRLSLEEFIE 41
E + + M D + G + EEF+
Sbjct: 122 ETLSSEDLDAMIDEIDADGSGTVDFEEFMG 151
Score = 24.8 bits (55), Expect = 1.4
Identities = 7/45 (15%), Positives = 16/45 (35%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIEGAKS 45
+ + + ++ + FR DK +G +S + E
Sbjct: 75 IGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAE 119
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Length = 94
Score = 24.9 bits (55), Expect = 1.2
Identities = 8/22 (36%), Positives = 17/22 (77%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
D++ R+ D + DG+++ EEF++
Sbjct: 68 DEMIREADIDGDGQVNYEEFVQ 89
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein,
solution structure, backbone dynamic, structural
genomics; NMR {Homo sapiens}
Length = 71
Score = 24.4 bits (54), Expect = 1.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
D + R+ D +QDGR++ EEF
Sbjct: 45 DAMIREADVDQDGRVNYEEFAR 66
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A
{Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A
1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D*
2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A
1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Length = 148
Score = 24.8 bits (55), Expect = 1.4
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Query: 16 EKRTDKIFRQM----DKNQDGRLSLEEFIE 41
EK TD +M D + DG ++ EEF+
Sbjct: 114 EKLTDDEVDEMIREADIDGDGHINYEEFVR 143
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B*
1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B*
1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Length = 166
Score = 24.9 bits (55), Expect = 1.4
Identities = 1/21 (4%), Positives = 6/21 (28%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
++ + G + +
Sbjct: 134 KNMWAAFPPDVAGNVDYKNIC 154
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein;
1.90A {Homo sapiens}
Length = 107
Score = 24.6 bits (54), Expect = 1.5
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 6 MKMPEDESTPEKRTD--KIFRQMDKNQDGRLSLEE 38
K DE P K + + + D N +G + +
Sbjct: 19 PKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMS 53
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 145
Score = 24.8 bits (55), Expect = 1.6
Identities = 5/35 (14%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Query: 7 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
+ E +++ +++ + DG ++ E F++
Sbjct: 108 ALTSSE------VEELMKEVSVSGDGAINYESFVD 136
Score = 23.3 bits (51), Expect = 6.1
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ +K P + K FR +DK +G + E
Sbjct: 63 VYRKPIKTPTE---QSKEMLDAFRALDKEGNGTIQEAEL 98
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 24.8 bits (55), Expect = 1.6
Identities = 5/21 (23%), Positives = 12/21 (57%)
Query: 20 DKIFRQMDKNQDGRLSLEEFI 40
D+++R+ ++ G + EF
Sbjct: 115 DEMYREAPIDKKGNFNYVEFT 135
Score = 24.4 bits (54), Expect = 2.6
Identities = 6/36 (16%), Positives = 12/36 (33%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
T+ + + PE F D+ G + +
Sbjct: 63 TMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHL 98
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal
binding Pro; NMR {Glycine max}
Length = 92
Score = 24.5 bits (54), Expect = 1.8
Identities = 6/22 (27%), Positives = 17/22 (77%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
+++ ++ D + DG+++ EEF++
Sbjct: 48 EQMIKEADLDGDGQVNYEEFVK 69
>3do9_A UPF0302 protein BA_1542/GBAA1542/BAS1430; uncharacterized protein,
structural genomics, protein structure initiative, PSI;
2.75A {Bacillus anthracis}
Length = 188
Score = 24.4 bits (53), Expect = 2.2
Identities = 7/39 (17%), Positives = 20/39 (51%)
Query: 19 TDKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVRLLQCDP 57
+K F + N+D + ++ + + + + V +L+ +P
Sbjct: 84 AEKSFHDIRLNRDEDIYIQLNFKSSFQNANYVAVLEENP 122
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin
crosslinking, ionized calciu binding adapter molecule
2, metal-binding protein; 2.15A {Homo sapiens} PDB:
2jjz_B 2vtg_A
Length = 150
Score = 24.4 bits (53), Expect = 2.4
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 4 TVMKMPEDESTPEKRTD--KIFRQMDKNQDGRLSLEE 38
K ++E+ PEK T + + + D N +G + L
Sbjct: 35 CDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMS 71
Score = 22.9 bits (49), Expect = 7.1
Identities = 3/22 (13%), Positives = 9/22 (40%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
K+ ++ +S +F+
Sbjct: 89 KKMISEVTGGVSDTISYRDFVN 110
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex,
membrane protein, endocytosis; HET: ANP; 3.10A {Mus
musculus}
Length = 550
Score = 24.4 bits (52), Expect = 2.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEFI 40
P +I++ D ++DG L EEF
Sbjct: 489 PNSVLGRIWKLSDVDRDGMLDDEEFA 514
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like,
squid, contractIle protein; 2.60A {Todarodes pacificus}
PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Length = 153
Score = 24.0 bits (53), Expect = 2.6
Identities = 6/36 (16%), Positives = 12/36 (33%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
T+ + PE F D++ G + +
Sbjct: 72 TLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYL 107
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer,
domain-swapping, EF-hand; 1.75A {Chenopodium album}
SCOP: a.39.1.10 PDB: 1h4b_A
Length = 86
Score = 23.8 bits (52), Expect = 3.1
Identities = 8/32 (25%), Positives = 21/32 (65%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 51
++ ++D + DG +S +EF + A+++ +V+
Sbjct: 49 RRMMAEIDTDGDGFISFDEFTDFARANRGLVK 80
Score = 23.0 bits (50), Expect = 5.9
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 11 DESTPEKRTD--KIFRQMDKNQDGRLSLEE 38
E TP+ D +IF++ D N DG++S E
Sbjct: 3 AEDTPQDIADRERIFKRFDTNGDGKISSSE 32
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand
calcium-binding protein; 1.75A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A
1npq_A 1trf_A
Length = 90
Score = 23.7 bits (52), Expect = 3.2
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 3 GTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEFIE 41
GTVM+M T E+ D I ++D++ G + EEF+
Sbjct: 43 GTVMRMLGQNPTKEE-LDAIIEEVDEDGSGTIDFEEFLV 80
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A
{Homo sapiens} SCOP: a.39.1.3
Length = 151
Score = 24.0 bits (51), Expect = 3.8
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 15 PEKRTDKIFRQMDKNQDGRLSLEEF 39
E T + F D + D ++L+E+
Sbjct: 110 MEHCTTRFFETCDLDNDKYIALDEW 134
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion,
structural genomics, PSI, protein structur initiative,
structural genomics of pathogenic protozoa CONS SGPP;
1.70A {Plasmodium falciparum} PDB: 2auc_A
Length = 146
Score = 23.3 bits (51), Expect = 4.7
Identities = 6/36 (16%), Positives = 13/36 (36%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ + + + K+F D N G L+ +
Sbjct: 71 EYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQM 106
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y
1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y
3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y
2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Length = 156
Score = 23.6 bits (52), Expect = 4.8
Identities = 5/36 (13%), Positives = 14/36 (38%)
Query: 4 TVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
++ + E+ F D+ + +L++E
Sbjct: 74 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYI 109
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S
genomics, seattle structural genomics center for
infectious ssgcid; NMR {Brucella abortus}
Length = 120
Score = 23.3 bits (51), Expect = 5.0
Identities = 6/31 (19%), Positives = 14/31 (45%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEGAKSDPSIVR 51
FR++ ++ + E + PS+V+
Sbjct: 65 TTFRKLPEDVRSNVDAASARELMLAQPSMVK 95
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand;
NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Length = 140
Score = 23.2 bits (51), Expect = 5.1
Identities = 7/39 (17%), Positives = 13/39 (33%), Gaps = 2/39 (5%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
++ E K F+ DK+ G + + E
Sbjct: 62 VLNRPNGFDMPGDPEEFV--KGFQVFDKDATGMIGVGEL 98
Score = 22.8 bits (50), Expect = 8.0
Identities = 3/23 (13%), Positives = 11/23 (47%)
Query: 19 TDKIFRQMDKNQDGRLSLEEFIE 41
T +++ + +E+F++
Sbjct: 39 TLAEITEIESTLPAEVDMEQFLQ 61
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like
domain, actin binding protein, contractIle protein;
20.00A {Gallus gallus} SCOP: i.15.1.1
Length = 863
Score = 23.3 bits (49), Expect = 6.0
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 21 KIFRQMDKNQDGRLSLEEFIEGAKS 45
F D+ + G + E+F S
Sbjct: 729 ASFNHFDRKKTGMMDCEDFRACLIS 753
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F*
1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C*
1o1g_C*
Length = 149
Score = 22.9 bits (50), Expect = 8.4
Identities = 5/33 (15%), Positives = 10/33 (30%)
Query: 7 KMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ + + R DK +G + E
Sbjct: 75 AANNKDQGTFEDFVEGLRVFDKEGNGTVMGAEL 107
Score = 22.9 bits (50), Expect = 8.7
Identities = 6/29 (20%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 16 EKRTDKIFRQM---DKNQDGRLSLEEFIE 41
EK T++ ++ ++ +G ++ E F++
Sbjct: 116 EKMTEEEVEELMKGQEDSNGCINYEAFVK 144
>2joj_A Centrin protein; N-terminal domain, centrin solution structure,
EF-hand calcium binding protein, cell cycle; NMR
{Euplotes octocarinatus}
Length = 77
Score = 22.5 bits (49), Expect = 9.0
Identities = 3/22 (13%), Positives = 13/22 (59%)
Query: 20 DKIFRQMDKNQDGRLSLEEFIE 41
++ + D+ +G + ++F++
Sbjct: 46 LELMNEYDREGNGYIGFDDFLD 67
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory
light chain LC-2, mantle muscle; rigor-like, squid,
contractIle protein; 2.60A {Todarodes pacificus} PDB:
2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Length = 159
Score = 22.5 bits (49), Expect = 9.3
Identities = 6/39 (15%), Positives = 13/39 (33%), Gaps = 2/39 (5%)
Query: 1 MVGTVMKMPEDESTPEKRTDKIFRQMDKNQDGRLSLEEF 39
+ + + E + F+ D+ G +S E
Sbjct: 71 IYEEMSSKDTGTAADEFM--EAFKTFDREGQGLISSAEI 107
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.314 0.132 0.373
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 891,498
Number of extensions: 37127
Number of successful extensions: 492
Number of sequences better than 10.0: 1
Number of HSP's gapped: 492
Number of HSP's successfully gapped: 384
Length of query: 60
Length of database: 6,701,793
Length adjustment: 31
Effective length of query: 29
Effective length of database: 5,836,242
Effective search space: 169251018
Effective search space used: 169251018
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 51 (23.3 bits)