BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15334
(451 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3S3E|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3E|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3F|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3F|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3H|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3H|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3K|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
pdb|3S3K|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
Length = 307
Score = 337 bits (865), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 162/288 (56%), Positives = 208/288 (72%), Gaps = 8/288 (2%)
Query: 145 HNCSHPIPVTLFCT----MTLDPDW-IAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNI 199
H S PI + F M+ D D+ + EFE+LK VGR QP T A+L CNRPKNR+TNI
Sbjct: 20 HMASRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNI 79
Query: 200 FPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTP 259
PYD SR+KLQPVDD+EGSDY+NANY+ G+ SPR++I TQGPL ST DDFWRMCWES +
Sbjct: 80 LPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSR 139
Query: 260 AIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGEHRM 319
AIVMLT+C EK R+KC +YWP+D P+ DI++ + + HY WV++E +CRG E R+
Sbjct: 140 AIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEFMLCRGSEQRI 199
Query: 320 ISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVL 379
+ H+HFTTWPD GVP+ P TLV FV +FR I Q PIVVHCSAGVGR+GTFI LD +L
Sbjct: 200 LRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRIL 259
Query: 380 QRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVYLQG 427
Q++ S+ VDI IV+ +R++RV MVQ+ QY I++C+ L+G
Sbjct: 260 QQINTSD---YVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLEG 304
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 176/279 (63%), Gaps = 11/279 (3%)
Query: 156 FCTMTLDPDWI-AVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDD 214
F + D +++ + E+E+LK VGR Q A L NR KNRY NI PYD++R KL VDD
Sbjct: 32 FMKLQADSNYLLSKEYEELKDVGRNQSCDIALLPENRGKNRYNNILPYDATRVKLSNVDD 91
Query: 215 EEGSDYVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDK 274
+ SDY+NA+YI G R+YI TQGPL T DDFW+M WE IVM+TQC+EK R K
Sbjct: 92 DPCSDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVK 151
Query: 275 CYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGE----HRMISHYHFTTWPD 330
C YWP+DQ + D+ + + W + E ++C G E HR+I H+H+T WPD
Sbjct: 152 CDHYWPADQDSLYYGDLILQMLSESVLPEWTIREFKIC-GEEQLDAHRLIRHFHYTVWPD 210
Query: 331 SGVPSSPNTLVSFVLSFRTHI--SPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGA 388
GVP + +L+ FV + R +I SP P VVHCSAGVGRTGTFIALD +LQ+L +
Sbjct: 211 HGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQL---DSK 267
Query: 389 GSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVYLQG 427
SVDI VH LR RV MVQ+ QY ++++CV+ L+
Sbjct: 268 DSVDIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVLRA 306
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 176/279 (63%), Gaps = 11/279 (3%)
Query: 156 FCTMTLDPDWI-AVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDD 214
F + D +++ + E+E+LK VGR Q A L NR KNRY NI PYD++R KL VDD
Sbjct: 16 FMKLQADSNYLLSKEYEELKDVGRNQSCDIALLPENRGKNRYNNILPYDATRVKLSNVDD 75
Query: 215 EEGSDYVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDK 274
+ SDY+NA+YI G R+YI TQGPL T DDFW+M WE IVM+TQC+EK R K
Sbjct: 76 DPCSDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVK 135
Query: 275 CYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGE----HRMISHYHFTTWPD 330
C YWP+DQ + D+ + + W + E ++C G E HR+I H+H+T WPD
Sbjct: 136 CDHYWPADQDSLYYGDLILQMLSESVLPEWTIREFKIC-GEEQLDAHRLIRHFHYTVWPD 194
Query: 331 SGVPSSPNTLVSFVLSFRTHI--SPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGA 388
GVP + +L+ FV + R +I SP P VVHCSAGVGRTGTFIALD +LQ+L +
Sbjct: 195 HGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQL---DSK 251
Query: 389 GSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVYLQG 427
SVDI VH LR RV MVQ+ QY ++++CV+ L+
Sbjct: 252 DSVDIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVLRA 290
>pdb|2PI7|A Chain A, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
pdb|2PI7|B Chain B, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
Length = 312
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/271 (46%), Positives = 176/271 (64%), Gaps = 6/271 (2%)
Query: 159 MTLDPDW-IAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEG 217
M D D+ +++FE+LK +G P AA+L NR KNRYTNI PYD SR +L +++EEG
Sbjct: 26 MAKDSDYKFSLQFEELKLIGLDIPHFAADLPMNRCKNRYTNILPYDFSRVRLVSMNEEEG 85
Query: 218 SDYVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYK 277
SDY+NANYI GY SP++YIATQGPL T +DFW+M + ++ IVMLTQC EK R KC
Sbjct: 86 SDYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRVKCDH 145
Query: 278 YWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPS-- 335
YWP + P+ DI + + + WV R+ E + + H+++T WPD GVP+
Sbjct: 146 YWPFTEDPIAYGDITVEMLSEEEHTDWVYRNFRISYADEVQDVMHFNYTAWPDHGVPTAN 205
Query: 336 SPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILR 395
+ +++ FV R ++ P+++HCSAGVGRTGTFIALD +LQ + + E VDIL
Sbjct: 206 AAESILQFVQMVRQKSVKSKGPMIIHCSAGVGRTGTFIALDWLLQHIRDHE---FVDILG 262
Query: 396 IVHGLRRQRVLMVQSLAQYAFIYECVQVYLQ 426
+V +R R+ MVQ+ QY FI++CVQ+ Q
Sbjct: 263 LVSDMRSYRMSMVQTEEQYIFIHQCVQLMWQ 293
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 248 bits (632), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 173/279 (62%), Gaps = 16/279 (5%)
Query: 156 FCTMTLDPDWI-AVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDD 214
F + D +++ + E+E+LK VGR Q A L NR KNRY NI PYD++R KL
Sbjct: 18 FMKLQADSNYLLSKEYEELKDVGRNQSCDIALLPENRGKNRYNNILPYDATRVKLSG--- 74
Query: 215 EEGSDYVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDK 274
GSDY+NA+YI G R+YI TQGPL T DDFW+M WE IVM+TQC+EK R K
Sbjct: 75 --GSDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVK 132
Query: 275 CYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGE----HRMISHYHFTTWPD 330
C YWP+DQ + D+ + + W + E ++C G E HR+I H+H+T WPD
Sbjct: 133 CDHYWPADQDSLYYGDLILQMLSESVLPEWTIREFKIC-GEEQLDAHRLIRHFHYTVWPD 191
Query: 331 SGVPSSPNTLVSFVLSFRTHI--SPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGA 388
GVP + +L+ FV + R +I SP P VVHCSAGVGRTGTFIALD +LQ+L +
Sbjct: 192 HGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQL---DSK 248
Query: 389 GSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVYLQG 427
SVDI VH LR RV MVQ+ QY ++++CV+ L+
Sbjct: 249 DSVDIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVLRA 287
>pdb|2G59|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
pdb|2G59|B Chain B, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
Length = 297
Score = 247 bits (631), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 123/268 (45%), Positives = 174/268 (64%), Gaps = 6/268 (2%)
Query: 159 MTLDPDW-IAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEG 217
M D D+ +++FE+LK +G P AA+L NR KNRYTNI PYD SR +L +++EEG
Sbjct: 19 MAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRYTNILPYDFSRVRLVSMNEEEG 78
Query: 218 SDYVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYK 277
+DY+NANYI GY SP++YIATQGPL T +DFW+M + ++ IVMLTQC EK R KC
Sbjct: 79 ADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRVKCDH 138
Query: 278 YWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPS-- 335
YWP + P+ DI + + W R+ E + + H+++T WPD GVP+
Sbjct: 139 YWPFTEEPIAYGDITVEMISEEEQDDWACRHFRINYADEMQDVMHFNYTAWPDHGVPTAN 198
Query: 336 SPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILR 395
+ +++ FV R + ++ P+++HCSAGVGRTGTFIALD +LQ + + E VDIL
Sbjct: 199 AAESILQFVHMVRQQATKSKGPMIIHCSAGVGRTGTFIALDRLLQHIRDHE---FVDILG 255
Query: 396 IVHGLRRQRVLMVQSLAQYAFIYECVQV 423
+V +R R+ MVQ+ QY FI++CVQ+
Sbjct: 256 LVSEMRSYRMSMVQTEEQYIFIHQCVQL 283
>pdb|2GJT|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptpro
pdb|2GJT|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptpro
Length = 295
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/268 (45%), Positives = 174/268 (64%), Gaps = 6/268 (2%)
Query: 159 MTLDPDW-IAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEG 217
M D D+ +++FE+LK +G P AA+L NR KNRYTNI PYD SR +L +++EEG
Sbjct: 17 MAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRYTNILPYDFSRVRLVSMNEEEG 76
Query: 218 SDYVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYK 277
+DY+NANYI GY SP++YIATQGPL T +DFW+M + ++ IVMLTQC EK R KC
Sbjct: 77 ADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRVKCDH 136
Query: 278 YWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPS-- 335
YWP + P+ DI + + W R+ E + + H+++T WPD GVP+
Sbjct: 137 YWPFTEEPIAYGDITVEMISEEEQDDWACRHFRINYADEMQDVMHFNYTAWPDHGVPTAN 196
Query: 336 SPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILR 395
+ +++ FV R + ++ P+++HCSAGVGRTGTFIALD +LQ + + E VDIL
Sbjct: 197 AAESILQFVHMVRQQATKSKGPMIIHCSAGVGRTGTFIALDRLLQHIRDHE---FVDILG 253
Query: 396 IVHGLRRQRVLMVQSLAQYAFIYECVQV 423
+V +R R+ MVQ+ QY FI++CVQ+
Sbjct: 254 LVSEMRSYRMSMVQTEEQYIFIHQCVQL 281
>pdb|2NZ6|A Chain A, Crystal Structure Of The Ptprj Inactivating Mutant C1239s
Length = 316
Score = 234 bits (596), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 162/260 (62%), Gaps = 9/260 (3%)
Query: 166 IAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANY 225
A E+EDLK VG QP AAEL NR KNRY N+ PYD SR KL V DY+NANY
Sbjct: 46 FAEEYEDLKLVGISQPKYAAELAENRGKNRYNNVLPYDISRVKLS-VQTHSTDDYINANY 104
Query: 226 IGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHP 285
+ GY S + +IATQGPL +T+ DFWRM WE AI+MLT+C+E+ R KC +YWPS Q
Sbjct: 105 MPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKCVEQGRTKCEEYWPSKQ-A 163
Query: 286 MRCADIEISLQDVCHYGSWVLSE--LRMCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSF 343
DI +++ W + + ++ + E + +HFT+WPD GVP + + L++F
Sbjct: 164 QDYGDITVAMTSEIVLPEWTIRDFTVKNIQTSESHPLRQFHFTSWPDHGVPDTTDLLINF 223
Query: 344 VLSFRTHI--SPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLR 401
R ++ SP + PI+VH SAGVGRTGTFIA+D + +Y E +VD+ IV+ LR
Sbjct: 224 RYLVRDYMKQSPPESPILVHSSAGVGRTGTFIAIDRL---IYQIENENTVDVYGIVYDLR 280
Query: 402 RQRVLMVQSLAQYAFIYECV 421
R LMVQ+ QY F+ +CV
Sbjct: 281 MHRPLMVQTEDQYVFLNQCV 300
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/260 (45%), Positives = 161/260 (61%), Gaps = 9/260 (3%)
Query: 166 IAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANY 225
A E+EDLK +G P AAE+ NR KNRY N+ PYD SR KL V DY+NANY
Sbjct: 46 FAEEYEDLKLIGISLPKYAAEIAENRGKNRYNNVLPYDISRVKLS-VQTHSTDDYINANY 104
Query: 226 IGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHP 285
+ GY S + +IATQGPL +T+ DFWRM WE AIVMLT+C+E+ R KC +YWPS Q
Sbjct: 105 MPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIVMLTKCVEQGRTKCEEYWPSKQ-A 163
Query: 286 MRCADIEISLQDVCHYGSWVLSE--LRMCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSF 343
DI +++ W + + ++ + E + +HFT+WPD GVP + + L++F
Sbjct: 164 QDYGDITVAMTSEVVLPEWTIRDFVVKNMQSSESHPLRQFHFTSWPDHGVPDTTDLLINF 223
Query: 344 VLSFRTHIS--PAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLR 401
R ++ P + PI+VHCSAGVGRTGTFIA+D + +Y E +VD+ IV+ LR
Sbjct: 224 RYLVRDYMKQIPPESPILVHCSAGVGRTGTFIAIDRL---IYQIENENTVDVYGIVYDLR 280
Query: 402 RQRVLMVQSLAQYAFIYECV 421
R LMVQ+ QY F+ +CV
Sbjct: 281 MHRPLMVQTEDQYVFLNQCV 300
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 162/260 (62%), Gaps = 9/260 (3%)
Query: 166 IAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANY 225
A E+EDLK VG QP AAEL NR KNRY N+ PYD SR KL V DY+NANY
Sbjct: 46 FAEEYEDLKLVGISQPKYAAELAENRGKNRYNNVLPYDISRVKLS-VQTHSTDDYINANY 104
Query: 226 IGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHP 285
+ GY S + +IATQGPL +T+ DFWRM WE AI+MLT+C+E+ R KC +YWPS Q
Sbjct: 105 MPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKCVEQGRTKCEEYWPSKQ-A 163
Query: 286 MRCADIEISLQDVCHYGSWVLSE--LRMCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSF 343
DI +++ W + + ++ + E + +HFT+ PD GVP + + L++F
Sbjct: 164 QDYGDITVAMTSEIVLPEWTIRDFTVKNIQTSESHPLRQFHFTSAPDHGVPDTTDLLINF 223
Query: 344 VLSFRTHI--SPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLR 401
R ++ SP + PI+VHCSAGVGRTGTFIA+D + +Y E +VD+ IV+ LR
Sbjct: 224 RYLVRDYMKQSPPESPILVHCSAGVGRTGTFIAIDRL---IYQIENENTVDVYGIVYDLR 280
Query: 402 RQRVLMVQSLAQYAFIYECV 421
R LMVQ+ QY F+ +CV
Sbjct: 281 MHRPLMVQTEDQYVFLNQCV 300
>pdb|2C7S|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Kappa At 1.95a Resolution
Length = 313
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/255 (44%), Positives = 150/255 (58%), Gaps = 9/255 (3%)
Query: 171 EDLKSVGRGQPTT--AAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGG 228
E+ +S GQ + A+ NR KNRY NI YD SR LQPV+D+ SDY+NANYI G
Sbjct: 48 EEYESFFEGQSASWDVAKKDQNRAKNRYGNIIAYDHSRVILQPVEDDPSSDYINANYIDG 107
Query: 229 YLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRC 288
Y P YIATQGP+ TV DFWRM W+ ++ IVM+T +E R KCYKYWP D
Sbjct: 108 YQRPSHYIATQGPVHETVYDFWRMIWQEQSACIVMVTNLVEVGRVKCYKYWPDDTEVY-- 165
Query: 289 ADIEISLQDVCHYGSWVLSELRMCRGG--EHRMISHYHFTTWPDSGVPSSPNTLVSFVLS 346
D +++ ++ +V+ + R G E R + +HFT WPD GVP L+SF+
Sbjct: 166 GDFKVTCVEMEPLAEYVVRTFTLERRGYNEIREVKQFHFTGWPDHGVPYHATGLLSFIRR 225
Query: 347 FRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVL 406
+ P+ PIVVHCSAG GRTG +I +D +L +E G VDI V LR +R+
Sbjct: 226 VKLSNPPSAGPIVVHCSAGAGRTGCYIVIDIMLDM---AEREGVVDIYNCVKALRSRRIN 282
Query: 407 MVQSLAQYAFIYECV 421
MVQ+ QY FI++ +
Sbjct: 283 MVQTEEQYIFIHDAI 297
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 211 bits (536), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 152/255 (59%), Gaps = 8/255 (3%)
Query: 171 EDLKSVGRGQPTT--AAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGG 228
++ +S+ GQ T + L N+PKNRY N+ YD SR LQP++ GSDY+NANY+ G
Sbjct: 36 QEYESIDPGQQFTWEHSNLEANKPKNRYANVIAYDHSRVILQPLEGIMGSDYINANYVDG 95
Query: 229 YLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRC 288
Y YIATQGPL T DFWRM WE R+ +VM+T+ EK R KC +YWP ++
Sbjct: 96 YRRQNAYIATQGPLPETFGDFWRMVWEQRSATVVMMTRLEEKSRIKCDQYWP-NRGTETY 154
Query: 289 ADIEISLQDVCHYGSWVLSELRMCRGG--EHRMISHYHFTTWPDSGVPSSPNTLVSFVLS 346
I+++L D ++ + + + G E R + H+ FT WPD GVP P ++F+
Sbjct: 155 GFIQVTLLDTMELATFCVRTFSLHKNGSSEKREVRHFQFTAWPDHGVPEYPTPFLAFLRR 214
Query: 347 FRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVL 406
+T P PIVVHCSAGVGRTG FI +D +L+R+ + +VD+ V +R QR
Sbjct: 215 VKTCNPPDAGPIVVHCSAGVGRTGCFIVIDAMLERIKTEK---TVDVYGHVTLMRSQRNY 271
Query: 407 MVQSLAQYAFIYECV 421
MVQ+ QY FI+E +
Sbjct: 272 MVQTEDQYGFIHEAL 286
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 146/250 (58%), Gaps = 18/250 (7%)
Query: 185 AELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQYIATQGPLCS 244
A L CN+ KNR NI PY+SSR LQP+ EGSDY+NA++I GY + YIATQGPL
Sbjct: 341 ASLPCNKFKNRLVNILPYESSRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAE 400
Query: 245 TVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQD-VCHYG- 302
T +DFWR WE+ + +VMLT+ E R+KC++YWP++ R A + + D + Y
Sbjct: 401 TTEDFWRALWENNSTIVVMLTKLREMGREKCHQYWPAE----RSARYQYFVVDPMAEYNM 456
Query: 303 -SWVLSELRM--CRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQH--- 356
++L E ++ R G+ R + + FT WP+ G P S + F+ + H + Q
Sbjct: 457 PQYILREFKVTDARDGQSRTVRQFQFTDWPEQGAPKSGEGFIDFI--GQVHKTKEQFGQD 514
Query: 357 -PIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYA 415
PI VHCSAGVGRTG FI L VL+R+ G VDI + V LR QR MVQ+ +Y
Sbjct: 515 GPISVHCSAGVGRTGVFITLSIVLERM---RYEGVVDIFQTVKVLRTQRPAMVQTEDEYQ 571
Query: 416 FIYECVQVYL 425
F ++ YL
Sbjct: 572 FCFQAALEYL 581
>pdb|2OOQ|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptprt
pdb|2OOQ|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptprt
Length = 286
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 151/255 (59%), Gaps = 9/255 (3%)
Query: 171 EDLKSVGRGQPTT--AAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGG 228
E+ +++ GQ + A+ NR KNRY NI YD SR +L +D + SDY+NANYI G
Sbjct: 26 EEYEALPEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDG 85
Query: 229 YLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRC 288
Y PR YIATQGP+ TV DFWRM W+ + +IVM+T +E R KC +YWP D
Sbjct: 86 YHRPRHYIATQGPMQETVKDFWRMIWQENSASIVMVTNLVEVGRVKCVRYWPDDTEVY-- 143
Query: 289 ADIEISLQDVCHYGSWVLSELRMCRGGEH--RMISHYHFTTWPDSGVPSSPNTLVSFVLS 346
DI+++L + +V+ + + G H R + +HFT+WPD GVP L+ FV
Sbjct: 144 GDIKVTLIETEPLAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGVPCYATGLLGFVRQ 203
Query: 347 FRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVL 406
+ P PIVVHCSAG GRTG FIA+DT+L +E G VDI V LR QRV
Sbjct: 204 VKFLNPPEAGPIVVHCSAGAGRTGCFIAIDTMLDM---AENEGVVDIFNCVRELRAQRVN 260
Query: 407 MVQSLAQYAFIYECV 421
+VQ+ QY F+++ +
Sbjct: 261 LVQTEEQYVFVHDAI 275
>pdb|1RPM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
pdb|1RPM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
Length = 278
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 145/247 (58%), Gaps = 7/247 (2%)
Query: 177 GRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQYI 236
G+ P +A+ NR KNRY NI YD SR +LQ ++ + SDY+N NYI GY P YI
Sbjct: 32 GQSAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGNYIDGYHRPNHYI 91
Query: 237 ATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQ 296
ATQGP+ T+ DFWRM W T +I+M+T +E R KC KYWP D + DI+++L
Sbjct: 92 ATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEIYK--DIKVTLI 149
Query: 297 DVCHYGSWVLSELRMCRGGEH--RMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPA 354
+ +V+ + + G H R I +HFT WPD GVP L+ FV ++ P+
Sbjct: 150 ETELLAEYVIRTFAVEKRGVHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPS 209
Query: 355 QHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQY 414
P+VVHCSAG GRTG FI +D +L +E G VDI V LR +RV MVQ+ QY
Sbjct: 210 AGPLVVHCSAGAGRTGCFIVIDIMLDM---AEREGVVDIYNCVRELRSRRVNMVQTEEQY 266
Query: 415 AFIYECV 421
FI++ +
Sbjct: 267 VFIHDAI 273
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 152/255 (59%), Gaps = 8/255 (3%)
Query: 171 EDLKSVGRGQPTT--AAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGG 228
++ +S+ GQ T + L N+PKNRY N+ YD SR LQP++ GSDY+NANY+ G
Sbjct: 34 QEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILQPIEGIMGSDYINANYVDG 93
Query: 229 YLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRC 288
Y YIATQGPL T DFWRM WE R+ IVM+T+ EK R KC +YWP ++
Sbjct: 94 YRRQNAYIATQGPLPETFGDFWRMVWEQRSATIVMMTRLEEKSRIKCDQYWP-NRGTETY 152
Query: 289 ADIEISLQDVCHYGSWVLSELRMCRGG--EHRMISHYHFTTWPDSGVPSSPNTLVSFVLS 346
I+++L D ++ + + + G E R + + FT WPD GVP P ++F+
Sbjct: 153 GFIQVTLLDTIELATFCVRTFSLHKNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAFLRR 212
Query: 347 FRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVL 406
+T P PIVVHCSAGVGRTG FI +D +L+R+ + +VD+ V +R QR
Sbjct: 213 VKTCNPPDAGPIVVHCSAGVGRTGCFIVIDAMLERI---KPEKTVDVYGHVTLMRSQRNY 269
Query: 407 MVQSLAQYAFIYECV 421
MVQ+ QY+FI+E +
Sbjct: 270 MVQTEDQYSFIHEAL 284
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 156/270 (57%), Gaps = 19/270 (7%)
Query: 166 IAVEFEDL-KSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
+ +EF+ L S +A L CN+ KNR NI PY+S+R LQP+ EGSDY+NA+
Sbjct: 319 MELEFKRLANSKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINAS 378
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQH 284
+I GY + YIATQGPL T +DFWRM WE+ + +VMLT+ E R+KC++YWP++
Sbjct: 379 FIDGYRQQKAYIATQGPLAETTEDFWRMLWENNSTIVVMLTKLREMGREKCHQYWPAE-- 436
Query: 285 PMRCADIEISLQD-VCHYG--SWVLSELRM--CRGGEHRMISHYHFTTWPDSGVPSSPNT 339
R A + + D + Y ++L E ++ R G+ R + + FT WP+ GVP S
Sbjct: 437 --RSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEG 494
Query: 340 LVSFVLSFRTHISPAQH----PIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILR 395
+ F+ + H + Q PI VHCSAGVGRTG FI L VL+R+ G VDI +
Sbjct: 495 FIDFI--GQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERM---RYEGVVDIFQ 549
Query: 396 IVHGLRRQRVLMVQSLAQYAFIYECVQVYL 425
V LR QR MVQ+ +Y F Y+ YL
Sbjct: 550 TVKMLRTQRPAMVQTEDEYQFCYQAALEYL 579
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/255 (41%), Positives = 150/255 (58%), Gaps = 8/255 (3%)
Query: 171 EDLKSVGRGQPTT--AAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGG 228
++ +S+ GQ T + L N+PKNRY N+ YD SR L +D GSDY+NANYI G
Sbjct: 22 QEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDG 81
Query: 229 YLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRC 288
Y YIATQGPL T+ DFWRM WE RT +VM+T+ EK R KC +YWP+ + C
Sbjct: 82 YRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPA-RGTETC 140
Query: 289 ADIEISLQDVCHYGSWVLSELRMCRGG--EHRMISHYHFTTWPDSGVPSSPNTLVSFVLS 346
I+++L D ++ + + + G E R + + F WPD GVP P +++F+
Sbjct: 141 GLIQVTLLDTVELATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRR 200
Query: 347 FRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVL 406
+ P+VVHCSAGVGRTG FI +D +L+R+ + + +VDI V +R QR
Sbjct: 201 VKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEK---TVDIYGHVTCMRSQRNY 257
Query: 407 MVQSLAQYAFIYECV 421
MVQ+ QY FI+E +
Sbjct: 258 MVQTEDQYVFIHEAL 272
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 145/251 (57%), Gaps = 18/251 (7%)
Query: 184 AAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQYIATQGPLC 243
+A L CN+ KNR NI PY+ +R LQP+ EGSDY+NA+++ GY + YIATQGPL
Sbjct: 326 SANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLA 385
Query: 244 STVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQD-VCHYG 302
+ +DFWRM WE + IVMLT+ E R+KC++YWP++ R A + + D + Y
Sbjct: 386 ESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAE----RSARYQYFVVDPMAEYN 441
Query: 303 --SWVLSELRM--CRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQH-- 356
++L E ++ R G+ R I + FT WP+ GVP + + F+ + H + Q
Sbjct: 442 MPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFI--GQVHKTKEQFGQ 499
Query: 357 --PIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQY 414
PI VHCSAGVGRTG FI L VL+R+ G VD+ + V LR QR MVQ+ QY
Sbjct: 500 DGPITVHCSAGVGRTGVFITLSIVLERM---RYEGVVDMFQTVKTLRTQRPAMVQTEDQY 556
Query: 415 AFIYECVQVYL 425
Y YL
Sbjct: 557 QLCYRAALEYL 567
>pdb|1YGR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGU|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
pdb|1YGU|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
Length = 610
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 148/265 (55%), Gaps = 7/265 (2%)
Query: 168 VEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIG 227
EF+ + V P A N+ KNRY +I PYD +R +L ++ + GS+Y+NA+YI
Sbjct: 32 AEFQSIPRVFSKFPIKEARKPFNQNKNRYVDILPYDYNRVELSEINGDAGSNYINASYID 91
Query: 228 GYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMR 287
G+ PR+YIA QGP TVDDFWR WE + IV +T+C E +R+KC +YWPS + R
Sbjct: 92 GFKEPRKYIAAQGPRDETVDDFWRXIWEQKATVIVXVTRCEEGNRNKCAEYWPSXEEGTR 151
Query: 288 C-ADIEISLQDVCHYGSWVLSELRMCRGGEH---RMISHYHFTTWPDSGVPSSPNTLVSF 343
D+ + + +++ +L + E R ++H FT+WPD GVP P+ L+
Sbjct: 152 AFGDVVVKINQHKRCPDYIIQKLNIVNKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKL 211
Query: 344 VLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQ 403
+ PIVVH SAGVGRTGT+I +D L+ L E VD+ V LRRQ
Sbjct: 212 RRRVNAFSNFFSGPIVVHSSAGVGRTGTYIGIDAXLEGL---EAENKVDVYGYVVKLRRQ 268
Query: 404 RVLMVQSLAQYAFIYECVQVYLQGG 428
R L VQ AQY I++ + Y Q G
Sbjct: 269 RCLXVQVEAQYILIHQALVEYNQFG 293
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 133/291 (45%), Gaps = 36/291 (12%)
Query: 162 DPDWIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQ----------- 210
+P + EF+ L S + N+ KNR +N+ PYD +R L+
Sbjct: 317 EPSPLEAEFQRLPSYRSWRTQHIGNQEENKSKNRNSNVIPYDYNRVPLKHELEMSKESEH 376
Query: 211 --------PVDDEEGSDYVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIV 262
D EE S Y+NA++I Y P IA QGPL T+ DFW+ ++ + IV
Sbjct: 377 DSDESSDDDSDSEEPSKYINASFIXSYWKPEVXIAAQGPLKETIGDFWQXIFQRKVKVIV 436
Query: 263 MLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLS--ELRMCRGGEHRMI 320
LT+ ++ C +YW + DIE+ L+D ++ L ELR + + R +
Sbjct: 437 XLTELKHGDQEICAQYWGEGKQTY--GDIEVDLKDTDKSSTYTLRVFELRHSKRKDSRTV 494
Query: 321 SHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQH----------PIVVHCSAGVGRTG 370
Y +T W +P+ P L+S + + + P+++HC G +TG
Sbjct: 495 YQYQYTNWSVEQLPAEPKELISXIQVVKQKLPQKNSSEGNKHHKSTPLLIHCRDGSQQTG 554
Query: 371 TFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECV 421
F AL L L ++E VDI ++V LR+ R+ V + QY F+Y+ +
Sbjct: 555 IFCAL---LNLLESAETEEVVDIFQVVKALRKARLGXVSTFEQYQFLYDVI 602
>pdb|2NV5|A Chain A, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|B Chain B, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|C Chain C, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
Length = 299
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 151/258 (58%), Gaps = 14/258 (5%)
Query: 171 EDLKSVGRGQPTT--AAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGG 228
++ +S+ GQ T + L N+PKNRY N+ YD SR L ++ GSDYVNANYI G
Sbjct: 31 QEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNANYIDG 90
Query: 229 YLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPS---DQHP 285
Y YIATQG L T DFWRM WE R+ +VM+T+ E+ R KC +YWPS + H
Sbjct: 91 YRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRGTETHG 150
Query: 286 MRCADIEISLQDVCHYGSWVLSELRMCRGG--EHRMISHYHFTTWPDSGVPSSPNTLVSF 343
+ ++++L D ++ + + + G E R + + FT WPD GVP P ++F
Sbjct: 151 L----VQVTLLDTVELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAF 206
Query: 344 VLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQ 403
+ +T P P+VVHCSAGVGRTG FI +D +L+R+ + + +VDI V +R Q
Sbjct: 207 LRRVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEK---TVDIYGHVTLMRAQ 263
Query: 404 RVLMVQSLAQYAFIYECV 421
R MVQ+ QY FI++ +
Sbjct: 264 RNYMVQTEDQYIFIHDAL 281
>pdb|1YFO|A Chain A, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
pdb|1YFO|B Chain B, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
Length = 302
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 153/281 (54%), Gaps = 11/281 (3%)
Query: 159 MTLDPDWIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGS 218
M D EF L + AA N+ KNRY NI PYD SR L PV+ S
Sbjct: 24 MADDNKLFREEFNALPACPIQATCEAASKEENKEKNRYVNILPYDHSRVHLTPVEGVPDS 83
Query: 219 DYVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKY 278
DY+NA++I GY ++IA QGP TV+DFWRM WE T IVM+T E+ KC +Y
Sbjct: 84 DYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKECKCAQY 143
Query: 279 WPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGE------HRMISHYHFTTWPDSG 332
WP DQ ++ +S++DV + + + + + G+ R+I+ +HFT+WPD G
Sbjct: 144 WP-DQGCWTYGNVRVSVEDVTVLVDYTVRKFCIQQVGDVTNRKPQRLITQFHFTSWPDFG 202
Query: 333 VPSSPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVD 392
VP +P ++ F+ + IVVHCSAGVGRTGTF+ +D +L +++ VD
Sbjct: 203 VPFTPIGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSER---KVD 259
Query: 393 ILRIVHGLRRQRVLMVQSLAQYAFIYEC-VQVYLQGGVRHE 432
+ V +R QR MVQ+ QY FIY+ ++ YL G E
Sbjct: 260 VYGFVSRIRAQRCQMVQTDMQYVFIYQALLEHYLYGDTELE 300
>pdb|1P15|A Chain A, Crystal Structure Of The D2 Domain Of Rptpa
pdb|1P15|B Chain B, Crystal Structure Of The D2 Domain Of Rptpa
Length = 253
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 185 AELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQYIATQGPLCS 244
L N KNR I PY+ +R + EE +DYVNA++I GY YIA+QGPL
Sbjct: 4 GNLPANMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDGYRQKDSYIASQGPLLH 63
Query: 245 TVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSW 304
T++DFWRM WE ++ +IVMLT+ E+ ++KC +YWPSD + DI + L+ S+
Sbjct: 64 TIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWPSD-GLVSYGDITVELKKEEECESY 122
Query: 305 VLSELRM--CRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFVLSF-RTHISPAQHPIVVH 361
+ +L + R + R I +HF WP+ G+PS +++ + + + HPI VH
Sbjct: 123 TVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQQQSGNHPITVH 182
Query: 362 CSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECV 421
CSAG GRTGTF AL TVL+R+ + G +D+ + V LR QR MVQ+L QY F Y+ V
Sbjct: 183 CSAGAGRTGTFCALSTVLERV---KAEGILDVFQTVKSLRLQRPHMVQTLEQYEFCYKVV 239
Query: 422 QVYL 425
Q Y+
Sbjct: 240 QEYI 243
>pdb|2H4V|A Chain A, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
pdb|2H4V|B Chain B, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
Length = 320
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 147/247 (59%), Gaps = 19/247 (7%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPV--DDEEGSDYVNANYIGGYLSPRQYIATQGPLCSTVD 247
N+ KNRY NI YD SR KL+P+ D + SDY+NANY+ GY + YIATQGPL ST +
Sbjct: 67 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFE 126
Query: 248 DFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLS 307
DFWRM WE T IVM+T +EK R KC +YWP++ + +I ++L+ + + +
Sbjct: 127 DFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTE-NSEEYGNIIVTLKSTKIHACYTVR 185
Query: 308 ELRM----CRGGE---------HRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPA 354
+ + G+ R++ YH+T WPD GVP +++FV P
Sbjct: 186 RFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPE 245
Query: 355 QHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQY 414
P++VHCSAGVGRTGT+I +D++LQ++ + +V++L + +R QR +VQ+ QY
Sbjct: 246 TGPVLVHCSAGVGRTGTYIVIDSMLQQI---KDKSTVNVLGFLKHIRTQRNYLVQTEEQY 302
Query: 415 AFIYECV 421
FI++ +
Sbjct: 303 IFIHDAL 309
>pdb|3QCL|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-(4-Hydroxybut-1-Yn-1-
Yl)benzoic Acid
pdb|3QCN|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Trigonal Crystal Form
Length = 310
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 147/247 (59%), Gaps = 19/247 (7%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPV--DDEEGSDYVNANYIGGYLSPRQYIATQGPLCSTVD 247
N+ KNRY NI YD SR KL+P+ D + SDY+NANY+ GY + YIATQGPL ST +
Sbjct: 56 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFE 115
Query: 248 DFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLS 307
DFWRM WE T IVM+T +EK R KC +YWP++ + +I ++L+ + + +
Sbjct: 116 DFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTE-NTEEYGNIIVTLKSTKIHACYTVR 174
Query: 308 ELRM----CRGGE---------HRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPA 354
+ + G+ R++ YH+T WPD GVP +++FV P
Sbjct: 175 RFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPE 234
Query: 355 QHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQY 414
P++VHCSAGVGRTGT+I +D++LQ++ + +V++L + +R QR +VQ+ QY
Sbjct: 235 TGPVLVHCSAGVGRTGTYIVIDSMLQQI---KDKSTVNVLGFLKHIRTQRNYLVQTEEQY 291
Query: 415 AFIYECV 421
FI++ +
Sbjct: 292 IFIHDAL 298
>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
Length = 599
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 150/268 (55%), Gaps = 17/268 (6%)
Query: 171 EDLKSVGRGQPTTAAEL---RCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIG 227
E+ S+ G EL NR KNRY NI P D SR L +D SDY+NA+YI
Sbjct: 32 EEFNSLPSGHIQGTFELANKEENREKNRYPNILPNDHSRVILSQLDGIPCSDYINASYID 91
Query: 228 GYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMR 287
GY ++IA QGP TV+DFWRM WE ++ IVMLT E+ +KC++YWP DQ
Sbjct: 92 GYKEKNKFIAAQGPKQETVNDFWRMVWEQKSATIVMLTNLKERKEEKCHQYWP-DQGCWT 150
Query: 288 CADIEISLQDVCHYGSWVLSELRM-------CRGGEHRMISHYHFTTWPDSGVPSSPNTL 340
+I + ++D + + + + C+ R++S HFT+WPD GVP +P +
Sbjct: 151 YGNIRVCVEDCVVLVDYTIRKFCIQPQLPDGCKAP--RLVSQLHFTSWPDFGVPFTPIGM 208
Query: 341 VSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGL 400
+ F+ +T PIVVHCSAGVGRTGTFI +D ++ ++ + VD+ V +
Sbjct: 209 LKFLKKVKTLNPVHAGPIVVHCSAGVGRTGTFIVIDAMMAMMHAEQ---KVDVFEFVSRI 265
Query: 401 RRQRVLMVQSLAQYAFIYEC-VQVYLQG 427
R QR MVQ+ QY FIY+ ++ YL G
Sbjct: 266 RNQRPQMVQTDMQYTFIYQALLEYYLYG 293
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 154/280 (55%), Gaps = 19/280 (6%)
Query: 158 TMTLDPDWIAVEFEDLKSVG-RGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEE 216
T D + EF L +V + L N K R I PYD +R L +E
Sbjct: 313 TTHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSMKRGQE 372
Query: 217 GSDYVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCY 276
+DY+NA++I GY +IATQGPL TV+DFWRM WE ++ IVMLT+ E+ +DKCY
Sbjct: 373 YTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLTEVQEREQDKCY 432
Query: 277 KYWPSD---QHPMRCADIE-------ISLQDVCHYGSWVLSELRMCRGGEHRMISHYHFT 326
+YWP++ H +I+ IS++D L++ + +G + R++ +HF
Sbjct: 433 QYWPTEGSVTHGEITIEIKNDTLSEAISIRDFL----VTLNQPQARQGEQVRVVRQFHFH 488
Query: 327 TWPDSGVPSSPNTLVSFVLSF-RTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNS 385
WP+ G+P+ ++ + + + HPI VHCSAG GRTGTFIAL +L+R+
Sbjct: 489 GWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSNILERV--- 545
Query: 386 EGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVYL 425
+ G +D+ + V LR QR MVQ+L QY F Y+ VQ ++
Sbjct: 546 KAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFI 585
>pdb|3QCB|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCB|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCC|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCC|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCD|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Trigonal Crystal Form
pdb|3QCE|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCE|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCF|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCF|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCG|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3-Bromo-4-Chlorobenzyl)sulfanyl]thiophene-2-
Carboxylic Acid
pdb|3QCH|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]-N-(Methylsulfonyl)
Thiophene-2-Carboxamide
pdb|3QCI|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
N-[(3-Aminophenyl)sulfonyl]-3-[(3,4-Dichlorobenzyl)
Sulfanyl]thiophene-2-Carboxamide
pdb|3QCJ|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
5-[({3-[(3,4-Dichlorobenzyl)sulfanyl]thiophen-2-
Yl}carbonyl)sulfamoyl]-2-Methoxybenzoic Acid
pdb|3QCK|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]benzoic Acid
Length = 310
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 147/247 (59%), Gaps = 19/247 (7%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPV--DDEEGSDYVNANYIGGYLSPRQYIATQGPLCSTVD 247
N+ KNRY NI YD SR KL+P+ D + SDY+NANY+ GY + YIATQGPL ST +
Sbjct: 56 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFE 115
Query: 248 DFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLS 307
DFWRM WE T IVM+T +EK R KC +YWP++ + +I ++L+ + + +
Sbjct: 116 DFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTE-NSEEYGNIIVTLKSTKIHACYTVR 174
Query: 308 ELRM----CRGGE---------HRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPA 354
+ + G+ R++ YH+T WPD GVP +++FV P
Sbjct: 175 RFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPE 234
Query: 355 QHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQY 414
P++VHCSAGVGRTGT+I +D++LQ++ + +V++L + +R QR +VQ+ QY
Sbjct: 235 TGPVLVHCSAGVGRTGTYIVIDSMLQQI---KDKSTVNVLGFLKHIRTQRNYLVQTEEQY 291
Query: 415 AFIYECV 421
FI++ +
Sbjct: 292 IFIHDAL 298
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 156/266 (58%), Gaps = 23/266 (8%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPV--DDEEGSDYVNANYIGGYLSPRQYIATQGPLCSTVD 247
N+ KNRY NI YD SR KL+P+ D + SDY+NANY+ GY + YIATQGPL ST +
Sbjct: 49 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFE 108
Query: 248 DFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLS 307
DFWRM WE T IVM+T +EK R KC +YWP+ ++ +I ++L+ + + +
Sbjct: 109 DFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPT-ENSEEYGNIIVTLKSTKIHACYTVR 167
Query: 308 ELRM----CRGGE---------HRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPA 354
+ + G+ R++ YH+T WPD GVP +++FV P
Sbjct: 168 RFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPE 227
Query: 355 QHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQY 414
P++VHCSAGVGRTGT+I +D++LQ++ + +V++L + +R QR +VQ+ QY
Sbjct: 228 TGPVLVHCSAGVGRTGTYIVIDSMLQQI---KDKSTVNVLGFLKHIRTQRNYLVQTEEQY 284
Query: 415 AFIYECVQVYLQGGVRHEERQIQNNE 440
FI++ + + G +E ++ +N+
Sbjct: 285 IFIHDALLEAILG----KETEVSSNQ 306
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 33/255 (12%)
Query: 184 AAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQYIATQGPLC 243
+A+ CN+ KNR +++ P + +R L P+ +G+DY+NA+YI GY ++I TQ PL
Sbjct: 344 SAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLP 403
Query: 244 STVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGS 303
T DFWRM W+ IVML D+ + YWPS + M C ++L
Sbjct: 404 HTTKDFWRMIWDHNAQIIVMLPDNQSLAEDE-FVYWPSREESMNCEAFTVTL-------- 454
Query: 304 WVLSELRMCRGGEHRMISH---------------YHFT--TWPDSGVPSSPNTLVSFVLS 346
+S+ R+C E ++I H HF WP+ P S + +
Sbjct: 455 --ISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPIS--STFELINV 510
Query: 347 FRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVL 406
+ P +VH G G AL T+ Q+L E +VD+ ++ + R
Sbjct: 511 IKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQL---ENENAVDVFQVAKMINLMRPG 567
Query: 407 MVQSLAQYAFIYECV 421
+ + QY FIY+ +
Sbjct: 568 VFTDIEQYQFIYKAM 582
>pdb|2PBN|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma
Length = 313
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 147/247 (59%), Gaps = 19/247 (7%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPV--DDEEGSDYVNANYIGGYLSPRQYIATQGPLCSTVD 247
N+ KNRY NI YD SR KL+P+ D + SDY+NANY+ GY + YIATQGPL ST +
Sbjct: 57 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFE 116
Query: 248 DFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLS 307
DFWRM WE T IVM+T +EK R KC +YWP+ ++ +I ++L+ + + +
Sbjct: 117 DFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPT-ENSEEYGNIIVTLKSTKIHACYTVR 175
Query: 308 ELRM----CRGGE---------HRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPA 354
+ + G+ R++ YH+T WPD GVP +++FV P
Sbjct: 176 RFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPE 235
Query: 355 QHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQY 414
P++VHCSAGVGRTGT+I +D++LQ++ + +V++L + +R QR +VQ+ QY
Sbjct: 236 TGPVLVHCSAGVGRTGTYIVIDSMLQQI---KDKSTVNVLGFLKHIRTQRNYLVQTEEQY 292
Query: 415 AFIYECV 421
FI++ +
Sbjct: 293 IFIHDAL 299
>pdb|3QCM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
pdb|3QCM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
Length = 310
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 147/247 (59%), Gaps = 19/247 (7%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPV--DDEEGSDYVNANYIGGYLSPRQYIATQGPLCSTVD 247
N+ KNRY NI YD SR KL+P+ D + SDY+NANY+ GY + YIATQGPL ST +
Sbjct: 56 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFE 115
Query: 248 DFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLS 307
DFWRM WE T I+M+T +EK R KC +YWP++ + +I ++L+ + + +
Sbjct: 116 DFWRMIWEQNTGIIIMITNLVEKGRRKCDQYWPTE-NTEEYGNIIVTLKSTKIHACYTVR 174
Query: 308 ELRM----CRGGE---------HRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPA 354
+ + G+ R++ YH+T WPD GVP +++FV P
Sbjct: 175 RFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPE 234
Query: 355 QHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQY 414
P++VHCSAGVGRTGT+I +D++LQ++ + +V++L + +R QR +VQ+ QY
Sbjct: 235 TGPVLVHCSAGVGRTGTYIVIDSMLQQI---KDKSTVNVLGFLKHIRTQRNYLVQTEEQY 291
Query: 415 AFIYECV 421
FI++ +
Sbjct: 292 IFIHDAL 298
>pdb|1NWL|A Chain A, Crystal Structure Of The Ptp1b Complexed With
Sp7343-Sp7964, A Ptyr Mimetic
pdb|1NWE|A Chain A, Ptp1b R47c Modified At C47 With N-[4-(2-{2-[3-(2-Bromo-
Acetylamino)-Propionylamino]-3-Hydroxy-Propionylamino}-
Ethyl)-Phenyl]-Oxalamic Acid
Length = 298
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 151/264 (57%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P+ A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPSRVAKLPKNKNRNRYCDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +TV FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTVGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LEMRKFRMGLIQTADQLRFSYLAV 274
>pdb|2HY3|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
pdb|2HY3|B Chain B, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
Length = 313
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 144/247 (58%), Gaps = 19/247 (7%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPV--DDEEGSDYVNANYIGGYLSPRQYIATQGPLCSTVD 247
N+ KNRY NI YD SR KL+P+ D + SDY+NANY+ GY + YIATQGPL ST +
Sbjct: 57 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFE 116
Query: 248 DFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLS 307
DFWR WE T IV +T +EK R KC +YWP+ ++ +I ++L+ + + +
Sbjct: 117 DFWRXIWEQNTGIIVXITNLVEKGRRKCDQYWPT-ENSEEYGNIIVTLKSTKIHACYTVR 175
Query: 308 ELRM----CRGGE---------HRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPA 354
+ + G+ R++ YH+T WPD GVP +++FV P
Sbjct: 176 RFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDXGVPEYALPVLTFVRRSSAARXPE 235
Query: 355 QHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQY 414
P++VHCSAGVGRTGT+I +D+ LQ++ + +V++L + +R QR +VQ+ QY
Sbjct: 236 TGPVLVHCSAGVGRTGTYIVIDSXLQQI---KDKSTVNVLGFLKHIRTQRNYLVQTEEQY 292
Query: 415 AFIYECV 421
FI++ +
Sbjct: 293 IFIHDAL 299
>pdb|1C86|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
(R47v, D48n) Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-
Thieno[2,3-C]pyran-3-Carboxylic Acid
Length = 298
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY N+ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYVNVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LDMRKFRMGLIQTADQLRFSYLAV 274
>pdb|1L8K|A Chain A, T Cell Protein-Tyrosine Phosphatase Structure
Length = 314
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 153/278 (55%), Gaps = 26/278 (9%)
Query: 163 PDWIAVEFEDLKSVGRGQPT-------------TAAELRCNRPKNRYTNIFPYDSSRYKL 209
P I EFE+L + R QP A+ NR +NRY ++ PYD SR KL
Sbjct: 2 PTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKL 61
Query: 210 QPVDDEEGSDYVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIE 269
Q ++ DY+NA+ + + R YI TQGPL +T FW M W+ +T A+VML + +E
Sbjct: 62 QNAEN----DYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVE 117
Query: 270 KHRDKCYKYWPSDQHPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHF 325
K KC +YWP+D M + S+ +DV Y + L +L GE R ISH+H+
Sbjct: 118 KESVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHY 177
Query: 326 TTWPDSGVPSSPNTLVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLY 383
TTWPD GVP SP + ++F+ R ++P P V+HCSAG+GR+GTF +DT L +
Sbjct: 178 TTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLM- 236
Query: 384 NSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECV 421
E ++I +++ +R+ R+ ++Q+ Q F Y +
Sbjct: 237 --EKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAI 272
>pdb|1GFY|A Chain A, Residue 259 Is A Key Determinant Of Substrate Specificity
Of Protein-Tyrosine Phosphatase 1b And Alpha
Length = 298
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY N+ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYVNVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R ++Q+ Q F Y V
Sbjct: 251 LDMRKFRCQLIQTADQLRFSYLAV 274
>pdb|1BZC|A Chain A, Human Ptp1b Catalytic Domain Complexed With Tpi
Length = 321
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LDMRKFRMGLIQTAEQLRFSYLAV 274
>pdb|1BZH|A Chain A, Cyclic Peptide Inhibitor Of Human Ptp1b
Length = 298
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LDMRKFRMGLIQTAEQLRFSYLAV 274
>pdb|2NT7|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2NTA|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
Length = 299
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LDMRKFRMGLIQTADQLRFSYLAV 274
>pdb|2CMA|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|3A5J|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 327
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 22 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 76
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 77 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 136
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 137 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 196
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 197 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 256
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 257 LEMRKFRMGLIQTADQLRFSYLAV 280
>pdb|1NL9|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 12 Using A Linked-Fragment Strategy
pdb|1NNY|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 23 Using A Linked-fragment Strategy
pdb|1NO6|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 5 Using A Linked-fragment Strategy
pdb|1NZ7|A Chain A, Potent, Selective Inhibitors Of Protein Tyrosine
Phosphatase 1b Using A Second Phosphotyrosine Binding
Site, Complexed With Compound 19.
pdb|1ONY|A Chain A, Oxalyl-aryl-amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 17
pdb|1ONZ|A Chain A, Oxalyl-Aryl-Amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 8b
pdb|1OEM|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To A
Sulfenyl-Amide Bond
pdb|1OES|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1PXH|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b With
Potent And Selective Bidentate Inhibitor Compound 2
pdb|1PH0|A Chain A, Non-Carboxylic Acid-Containing Inhibitor Of Ptp1b
Targeting The Second Phosphotyrosine Site
pdb|1PYN|A Chain A, Dual-Site Potent, Selective Protein Tyrosine Phosphatase
1b Inhibitor Using A Linked Fragment Strategy And A
Malonate Head On The First Site
pdb|1Q1M|A Chain A, A Highly Efficient Approach To A Selective And Cell Active
Ptp1b Inhibitors
pdb|1QXK|A Chain A, Monoacid-Based, Cell Permeable, Selective Inhibitors Of
Protein Tyrosine Phosphatase 1b
pdb|1SUG|A Chain A, 1.95 A Structure Of Apo Protein Tyrosine Phosphatase 1b
pdb|1XBO|A Chain A, Ptp1b Complexed With Isoxazole Carboxylic Acid
pdb|1WAX|A Chain A, Protein Tyrosine Phosphatase 1b With Active Site Inhibitor
pdb|2BGD|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2BGE|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2CM7|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CM8|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNF|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNG|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNH|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNI|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2HNP|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2HNQ|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2VEU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEV|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEW|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEX|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEY|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|3D9C|A Chain A, Crystal Structure Ptp1b Complex With Aryl Seleninic Acid
pdb|3EAX|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Compound Lzp-6
pdb|3EB1|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Inhibitor Lzp-25
pdb|3I7Z|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo First Catalytic Step
pdb|3I80|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo Second Catalytic Step
Length = 321
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LEMRKFRMGLIQTADQLRFSYLAV 274
>pdb|1G7F|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177496
Length = 298
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LDMRKFRMGLIQTADQLRFSYLAV 274
>pdb|2FJM|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJM|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 28 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 82
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 83 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSVKCAQYWPQKEE 142
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 143 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 202
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 203 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 262
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 263 LEMRKFRMGLIQTADQLRFSYLAV 286
>pdb|2AZR|A Chain A, Crystal Structure Of Ptp1b With Bicyclic Thiophene
Inhibitor
pdb|2B07|A Chain A, Crystal Structure Of Ptp1b With Tricyclic Thiophene
Inhibitor.
pdb|2H4G|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2H4K|A Chain A, Crystal Structure Of Ptp1b With A Monocyclic Thiophene
Inhibitor
pdb|2HB1|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2QBP|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2QBQ|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBR|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBS|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZMM|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZN7|A Chain A, Crystal Structures Of Ptp1b-Inhibitor Complexes
Length = 299
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LEMRKFRMGLIQTADQLRFSYLAV 274
>pdb|1L8G|A Chain A, Crystal Structure Of Ptp1b Complexed With 7-(1,1-dioxo-1h-
Benzo[d]isothiazol-3-yloxymethyl)-2-(oxalyl-amino)-4,7-
Dihydro-5h-thieno[2,3-c]pyran-3-carboxylic Acid
Length = 321
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LDMRKFRMGLIQTADQLRFSYLAV 274
>pdb|1Q6J|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|1Q6M|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 3
pdb|1Q6N|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6N|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6P|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6P|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6S|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6S|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6T|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|1Q6T|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|2FJN|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJN|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 28 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 82
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 83 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 142
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 143 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 202
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 203 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 262
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 263 LEMRKFRMGLIQTADQLRFSYLAV 286
>pdb|1ECV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 5-Iodo-2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C83|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 6-(Oxalyl-Amino)-1h-Indole-5-Carboxylic
Acid
pdb|1C84|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 3-(Oxalyl-Amino)-Naphthalene-2-Carboxlic
Acid
pdb|1C85|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C87|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-Thieno[2,3-
C]pyran-3-Carboxylic Acid
pdb|1C88|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-4,5,6,7-Tetrahydro-
Thieno[2,3-C]pyridine-3-Carboxylic Acid
Length = 298
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LDMRKFRMGLIQTADQLRFSYLAV 274
>pdb|1BZJ|A Chain A, Human Ptp1b Complexed With Tpicooh
Length = 297
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 15 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 69
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 70 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 129
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 130 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 189
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 190 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 249
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 250 LEMRKFRMGLIQTADQLRFSYLAV 273
>pdb|1G7G|A Chain A, Human Ptp1b Catalytic Domain Complexes With Pnu179326
pdb|1JF7|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1JF7|B Chain B, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1KAK|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1KAV|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1T48|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T49|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T4J|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|2F6T|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6V|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6W|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Y|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Z|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F70|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F71|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
Length = 298
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LEMRKFRMGLIQTADQLRFSYLAV 274
>pdb|2CM2|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (P212121)
pdb|2CM3|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CM3|B Chain B, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CMB|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CMC|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNE|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
Length = 304
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 22 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 76
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 77 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 136
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 137 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 196
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 197 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 256
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 257 LEMRKFRMGLIQTADQLRFSYLAV 280
>pdb|3SME|A Chain A, Structure Of Ptp1b Inactivated By H2o2BICARBONATE
Length = 300
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 18 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 72
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 73 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 132
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 133 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 192
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 193 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 252
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 253 LEMRKFRMGLIQTADQLRFSYLAV 276
>pdb|2F6F|A Chain A, The Structure Of The S295f Mutant Of Human Ptp1b
Length = 302
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 20 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 74
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 75 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 134
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 135 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 194
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 195 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 254
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 255 LEMRKFRMGLIQTADQLRFSYLAV 278
>pdb|1LQF|A Chain A, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|B Chain B, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|C Chain C, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|D Chain D, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
Length = 295
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 28 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 82
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 83 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 142
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 143 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 202
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 203 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 262
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 263 LEMRKFRMGLIQTADQLRFSYLAV 286
>pdb|3CWE|A Chain A, Ptp1b In Complex With A Phosphonic Acid Inhibitor
Length = 290
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 23 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 77
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 78 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 137
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 138 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 197
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 198 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 257
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 258 LEMRKFRMGLIQTADQLRFSYLAV 281
>pdb|4I8N|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Inhibitor
[(4-{(2s)-2-(1,3-Benzoxazol-2-Yl)-2-[(4-Fluorophenyl)
Sulfamoyl]ethyl}phenyl)amino](Oxo)acetic Acid
Length = 354
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 50 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 104
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 105 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 164
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 165 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 224
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 225 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 284
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 285 LEMRKFRMGLIQTADQLRFSYLAV 308
>pdb|1PTV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine
Length = 321
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVH SAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LDMRKFRMGLIQTADQLRFSYLAV 274
>pdb|1G1F|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Tri-Phosphorylated Peptide (Rdi(Ptr)
Etd(Ptr)(Ptr)rk) From The Insulin Receptor Kinase
pdb|1G1G|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Mono-Phosphorylated Peptide (Etdy(Ptr)
Rkggkgll) From The Insulin Receptor Kinase
pdb|1G1H|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Bis-Phosphorylated Peptide
(Etd(Ptr)(Ptr) Rkggkgll) From The Insulin Receptor
Kinase
pdb|2B4S|A Chain A, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|C Chain C, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
Length = 298
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVH SAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHASAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LEMRKFRMGLIQTADQLRFSYLAV 274
>pdb|1EEN|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-D-A-D-Bpa-Ptyr-L-I-P-Q-Q-G
pdb|1EEO|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-E-L-E-F-Ptyr-M-D-Y-E-Nh2
pdb|1PTY|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Phosphotyrosine Molecules
Length = 321
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVH SAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LEMRKFRMGLIQTADQLRFSYLAV 274
>pdb|1AAX|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Bis(Para-Phosphophenyl)methane (Bppm)
Molecules
Length = 321
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVH SAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LEMRKFRMGLIQTADQLRFSYLAV 274
>pdb|3QKP|A Chain A, Protein Tyrosine Phosphatase 1b - Apo W179f Mutant With
Open Wpd-Loop
pdb|3QKQ|A Chain A, Protein Tyrosine Phosphatase 1b - W179f Mutant Bound With
Vanadate
Length = 321
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 149/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TT+PD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTFPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LEMRKFRMGLIQTADQLRFSYLAV 274
>pdb|1I57|A Chain A, Crystal Structure Of Apo Human Ptp1b (C215s) Mutant
Length = 310
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 28 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 82
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 83 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 142
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 143 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 202
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVH SAG+GR+GTF DT L + + SVDI +++
Sbjct: 203 FLNFLFKVRESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 262
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 263 LEMRKFRMGLIQTADQLRFSYLAV 286
>pdb|1PTU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Hexa-Peptide
(Dadepyl-Nh2)
pdb|1PTT|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Tetra-Peptide
(Ac-Depyl-Nh2)
Length = 321
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVH SAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LEMRKFRMGLIQTADQLRFSYLAV 274
>pdb|1OEO|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To Sulfonic
Acid
pdb|1OET|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEU|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEV|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
Length = 321
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVH SAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHXSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LEMRKFRMGLIQTADQLRFSYLAV 274
>pdb|3EU0|A Chain A, Crystal Structure Of The S-Nitrosylated Cys215 Of Ptp1b
Length = 327
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 22 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 76
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 77 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 136
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 137 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 196
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVH SAG+GR+GTF DT L + + SVDI +++
Sbjct: 197 FLNFLFKVRESGSLSPEHGPVVVHXSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 256
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 257 LEMRKFRMGLIQTADQLRFSYLAV 280
>pdb|3ZV2|A Chain A, Human Protein-Tyrosine Phosphatase 1b C215a, S216a Mutant
Length = 320
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVH +AG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHAAAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 251 LEMRKFRMGLIQTADQLRFSYLAV 274
>pdb|3A5K|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 304
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 22 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 76
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK K +YWP ++
Sbjct: 77 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKWAQYWPQKEE 136
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 137 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 196
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVHCSAG+GR+GTF DT L + + SVDI +++
Sbjct: 197 FLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 256
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 257 LEMRKFRMGLIQTADQLRFSYLAV 280
>pdb|1PA1|A Chain A, Crystal Structure Of The C215d Mutant Of Protein Tyrosine
Phosphatase 1b
Length = 310
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 148/264 (56%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 28 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 82
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 83 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 142
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 143 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 202
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVH SAG+GR+GTF DT L + + SVDI +++
Sbjct: 203 FLNFLFKVRESGSLSPEHGPVVVHDSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 262
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++Q+ Q F Y V
Sbjct: 263 LEMRKFRMGLIQTADQLRFSYLAV 286
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 138/248 (55%), Gaps = 11/248 (4%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPVDDE-EGSDYVNANYIGGYL-----SPRQYIATQGPLC 243
N+ KNRY NI P+D SR LQ D GSDY+NANYI L + + YIA+QG L
Sbjct: 28 NKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLE 87
Query: 244 STVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEIS---LQDVCH 300
+TV+DFW+M W+ + IVM T+ +EK R+KC YWP ++ D
Sbjct: 88 ATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTE 147
Query: 301 YGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFV--LSFRTHISPAQHPI 358
Y L + G R I HY + +WPD GVPS P ++SF+ ++ R P PI
Sbjct: 148 YKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPI 207
Query: 359 VVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIY 418
+VHCSAG+GRTGT I +D +++ + +DI + + +R QR MVQ+ AQY FIY
Sbjct: 208 IVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIY 267
Query: 419 ECVQVYLQ 426
+ +++
Sbjct: 268 VAIAQFIE 275
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 138/248 (55%), Gaps = 11/248 (4%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPVDDE-EGSDYVNANYIGGYL-----SPRQYIATQGPLC 243
N+ KNRY NI P+D SR LQ D GSDY+NANYI L + + YIA+QG L
Sbjct: 270 NKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLE 329
Query: 244 STVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEIS---LQDVCH 300
+TV+DFW+M W+ + IVM T+ +EK R+KC YWP ++ D
Sbjct: 330 ATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTE 389
Query: 301 YGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFV--LSFRTHISPAQHPI 358
Y L + G R I HY + +WPD GVPS P ++SF+ ++ R P PI
Sbjct: 390 YKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPI 449
Query: 359 VVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIY 418
+VHCSAG+GRTGT I +D +++ + +DI + + +R QR MVQ+ AQY FIY
Sbjct: 450 IVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIY 509
Query: 419 ECVQVYLQ 426
+ +++
Sbjct: 510 VAIAQFIE 517
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 138/248 (55%), Gaps = 11/248 (4%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPVDDE-EGSDYVNANYIGGYL-----SPRQYIATQGPLC 243
N+ KNRY NI P+D SR LQ D GSDY+NANYI L + + YIA+QG L
Sbjct: 50 NKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLE 109
Query: 244 STVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEIS---LQDVCH 300
+TV+DFW+M W+ + IVM T+ +EK R+KC YWP ++ D
Sbjct: 110 ATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTE 169
Query: 301 YGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFV--LSFRTHISPAQHPI 358
Y L + G R I HY + +WPD GVPS P ++SF+ ++ R P PI
Sbjct: 170 YKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPI 229
Query: 359 VVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIY 418
+VHCSAG+GRTGT I +D +++ + +DI + + +R QR MVQ+ AQY FIY
Sbjct: 230 IVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIY 289
Query: 419 ECVQVYLQ 426
+ +++
Sbjct: 290 VAIAQFIE 297
>pdb|1A5Y|A Chain A, Protein Tyrosine Phosphatase 1b Cysteinyl-Phosphate
Intermediate
Length = 330
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 147/264 (55%), Gaps = 12/264 (4%)
Query: 165 WIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNAN 224
W A+ ++D++ P A+L N+ +NRY ++ P+D SR KL +E +DY+NA+
Sbjct: 16 WAAI-YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH----QEDNDYINAS 70
Query: 225 YIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP-SDQ 283
I + R YI TQGPL +T FW M WE ++ +VML + +EK KC +YWP ++
Sbjct: 71 LIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
Query: 284 HPMRCADIEISL----QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNT 339
M D + L +D+ Y + EL E R I H+H+TTWPD GVP SP +
Sbjct: 131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPAS 190
Query: 340 LVSFVLSFRT--HISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
++F+ R +SP P+VVH SAG+GR+GTF DT L + + SVDI +++
Sbjct: 191 FLNFLFKVRESGSLSPEHGPVVVHXSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 250
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R+ R+ ++ + Q F Y V
Sbjct: 251 LDMRKFRMGLIATAEQLRFSYLAV 274
>pdb|3PS5|A Chain A, Crystal Structure Of The Full-Length Human Protein
Tyrosine Phosphatase Shp-1
Length = 595
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 11/248 (4%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPVDDE-EGSDYVNANYIGGYL-----SPRQYIATQGPLC 243
N+ KNRY NI P+D SR LQ D GSDY+NANYI L + + YIA+QG L
Sbjct: 270 NKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLE 329
Query: 244 STVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEIS---LQDVCH 300
+TV+DFW+M W+ + IVM T+ +EK R+KC YWP ++ D
Sbjct: 330 ATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTE 389
Query: 301 YGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFV--LSFRTHISPAQHPI 358
Y L + G R I HY + +WPD GVPS P ++SF+ ++ R P PI
Sbjct: 390 YKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPI 449
Query: 359 VVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIY 418
+VH SAG+GRTGT I +D +++ + +DI + + +R QR MVQ+ AQY FIY
Sbjct: 450 IVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIY 509
Query: 419 ECVQVYLQ 426
+ +++
Sbjct: 510 VAIAQFIE 517
>pdb|1FPR|A Chain A, Crystal Structure Of The Complex Formed Between The
Catalytic Domain Of Shp-1 And An In Vitro Peptide
Substrate Py469 Derived From Shps-1
Length = 284
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 11/248 (4%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPVDDE-EGSDYVNANYIGGYL-----SPRQYIATQGPLC 243
N+ KNRY NI P+D SR LQ D GSDY+NANYI L + + YIA+QG L
Sbjct: 28 NKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLE 87
Query: 244 STVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEIS---LQDVCH 300
+TV+DFW+M W+ + IVM T+ +EK R+KC YWP ++ D
Sbjct: 88 ATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTE 147
Query: 301 YGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFV--LSFRTHISPAQHPI 358
Y L + G R I HY + +WPD GVPS P ++SF+ ++ R P PI
Sbjct: 148 YKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPI 207
Query: 359 VVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIY 418
+VH SAG+GRTGT I +D +++ + +DI + + +R QR MVQ+ AQY FIY
Sbjct: 208 IVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIY 267
Query: 419 ECVQVYLQ 426
+ +++
Sbjct: 268 VAIAQFIE 275
>pdb|4GRY|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GRZ|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Po4
Length = 288
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 11/248 (4%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPVDDE-EGSDYVNANYIGGYL-----SPRQYIATQGPLC 243
N+ KNRY NI P+D SR LQ D GSDY+NANYI L + + YIA+QG L
Sbjct: 30 NKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLE 89
Query: 244 STVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEIS---LQDVCH 300
+TV+DFW+M W+ + IVM T+ +EK R+KC YWP ++ D
Sbjct: 90 ATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTE 149
Query: 301 YGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFV--LSFRTHISPAQHPI 358
Y L + G R I HY + +WPD GVPS P ++SF+ ++ R P PI
Sbjct: 150 YKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPI 209
Query: 359 VVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIY 418
+VH SAG+GRTGT I +D +++ + +DI + + +R QR MVQ+ AQY FIY
Sbjct: 210 IVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIY 269
Query: 419 ECVQVYLQ 426
+ +++
Sbjct: 270 VAIAQFIE 277
>pdb|2BIJ|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 (step, Striatum Enriched Enriched
Phosphatase)
Length = 305
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 132/237 (55%), Gaps = 11/237 (4%)
Query: 193 KNRYTNIFPYDSSRYKL-QPVDDEEGSDYVNANYIGGYLSPRQ-YIATQGPLCSTVDDFW 250
KNRY I P SR L P D+ S Y+NANYI GY + YIATQGP+ STV DFW
Sbjct: 67 KNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFW 126
Query: 251 RMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELR 310
RM W+ TP IVM+T IE+ +KC +YWP +Q + +EI++Q V H + L +
Sbjct: 127 RMVWQEHTPIIVMITN-IEEMNEKCTEYWPEEQ--VAYDGVEITVQKVIHTEDYRLRLIS 183
Query: 311 MCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHIS---PAQHPIVVHCSAGVG 367
+ G E R + HY FT+WPD P L+ V P PI+VHCSAG+G
Sbjct: 184 LKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHCSAGIG 243
Query: 368 RTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
RTG FIA Q+L G VDIL+ LR+ R M+Q+ QY F++ + +Y
Sbjct: 244 RTGCFIATSICCQQLRQE---GVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVMSLY 297
>pdb|2P6X|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
pdb|2P6X|B Chain B, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
Length = 309
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 166 IAVEFEDLK------SVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSD 219
A EF LK + PTT AE N KNRY +I PYD SR +L + +E S
Sbjct: 24 FANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSS 83
Query: 220 YVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYW 279
Y+NAN+I G P+ YIATQGPL +T+ DFWRM WE IVM E + KC +YW
Sbjct: 84 YINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYW 143
Query: 280 PS-DQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPN 338
+ + +S + +++ L++ E R I +H+ WPD VPSS +
Sbjct: 144 AEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSID 203
Query: 339 TLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVH 398
++ + R + PI +HCSAG GRTG A+D L + + + ++
Sbjct: 204 PILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIR 263
Query: 399 GLRRQRVLMVQSLAQYAFIYECV 421
+R QR +VQ+ QY +Y V
Sbjct: 264 EMRTQRPSLVQTQEQYELVYNAV 286
>pdb|2QCJ|A Chain A, Native Structure Of Lyp
pdb|2QCJ|B Chain B, Native Structure Of Lyp
pdb|2QCT|A Chain A, Structure Of Lyp With Inhibitor I-C11
pdb|2QCT|B Chain B, Structure Of Lyp With Inhibitor I-C11
Length = 313
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 166 IAVEFEDLK------SVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSD 219
A EF LK + PTT AE N KNRY +I PYD SR +L + +E S
Sbjct: 43 FANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSS 102
Query: 220 YVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYW 279
Y+NAN+I G P+ YIATQGPL +T+ DFWRM WE IVM E + KC +YW
Sbjct: 103 YINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYW 162
Query: 280 PS-DQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPN 338
+ + +S + +++ L++ E R I +H+ WPD VPSS +
Sbjct: 163 AEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSID 222
Query: 339 TLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVH 398
++ + R + PI +HCSAG GRTG A+D L + + + ++
Sbjct: 223 PILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIR 282
Query: 399 GLRRQRVLMVQSLAQYAFIYECV 421
+R QR +VQ+ QY +Y V
Sbjct: 283 EMRTQRPSLVQTQEQYELVYNAV 305
>pdb|3H2X|A Chain A, Crystal Structure Of The Human Lymphoid Tyrosine
Phosphatase Catalytic Domain
Length = 302
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 166 IAVEFEDLK------SVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSD 219
A EF LK + PTT AE N KNRY +I PYD SR +L + +E S
Sbjct: 24 FANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSS 83
Query: 220 YVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYW 279
Y+NAN+I G P+ YIATQGPL +T+ DFWRM WE IVM E + KC +YW
Sbjct: 84 YINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYW 143
Query: 280 PS-DQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPN 338
+ + +S + +++ L++ E R I +H+ WPD VPSS +
Sbjct: 144 AEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSID 203
Query: 339 TLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVH 398
++ + R + PI +HCSAG GRTG A+D L + + + ++
Sbjct: 204 PILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIR 263
Query: 399 GLRRQRVLMVQSLAQYAFIYECV 421
+R QR +VQ+ QY +Y V
Sbjct: 264 EMRTQRPSLVQTQEQYELVYNAV 286
>pdb|2CJZ|A Chain A, Crystal Structure Of The C472s Mutant Of Human Protein
Tyrosine Phosphatase Ptpn5 (Step, Striatum Enriched
Phosphatase) In Complex With Phosphotyrosine
Length = 305
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 131/237 (55%), Gaps = 11/237 (4%)
Query: 193 KNRYTNIFPYDSSRYKL-QPVDDEEGSDYVNANYIGGYLSPRQ-YIATQGPLCSTVDDFW 250
KNRY I P SR L P D+ S Y+NANYI GY + YIATQGP+ STV DFW
Sbjct: 67 KNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFW 126
Query: 251 RMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELR 310
RM W+ TP IVM+T IE+ +KC +YWP +Q + +EI++Q V H + L +
Sbjct: 127 RMVWQEHTPIIVMITN-IEEMNEKCTEYWPEEQ--VAYDGVEITVQKVIHTEDYRLRLIS 183
Query: 311 MCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHIS---PAQHPIVVHCSAGVG 367
+ G E R + HY FT+WPD P L+ V P PI+VH SAG+G
Sbjct: 184 LKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHSSAGIG 243
Query: 368 RTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
RTG FIA Q+L G VDIL+ LR+ R M+Q+ QY F++ + +Y
Sbjct: 244 RTGCFIATSICCQQLRQE---GVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVMSLY 297
>pdb|2BV5|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 At 1.8a Resolution
Length = 282
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 131/237 (55%), Gaps = 11/237 (4%)
Query: 193 KNRYTNIFPYDSSRYKL-QPVDDEEGSDYVNANYIGGYLSPRQ-YIATQGPLCSTVDDFW 250
KNRY I P SR L P D+ S Y+NANYI GY + YIATQGP+ STV DFW
Sbjct: 46 KNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFW 105
Query: 251 RMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELR 310
RM W+ TP IVM+T IE+ +KC +YWP +Q + +EI++Q V H + L +
Sbjct: 106 RMVWQEHTPIIVMITN-IEEMNEKCTEYWPEEQ--VAYDGVEITVQKVIHTEDYRLRLIS 162
Query: 311 MCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHIS---PAQHPIVVHCSAGVG 367
+ G E R + HY FT+WPD P L+ V P PI+VH SAG+G
Sbjct: 163 LKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHXSAGIG 222
Query: 368 RTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
RTG FIA Q+L G VDIL+ LR+ R M+Q+ QY F++ + +Y
Sbjct: 223 RTGCFIATSICCQQLRQE---GVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVMSLY 276
>pdb|3O4S|A Chain A, Crystal Structure Of Heptp With A Closed Wpd Loop And An
Ordered E- Loop
pdb|3O4T|A Chain A, Crystal Structure Of Heptp With An Open Wpd Loop And
Partially Depleted Active Site
pdb|3O4U|A Chain A, Crystal Structure Of Heptp With An Atypically Open Wpd
Loop
Length = 308
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 148/291 (50%), Gaps = 14/291 (4%)
Query: 140 QDVTLH---NCSHPIPVTLFCTMTLDPDWIAVEFEDLKSVGRGQPTTAAELRCNRPKNRY 196
++VTLH HP+ T + PD +E E LK ++ + K+RY
Sbjct: 16 REVTLHFLRTAGHPL--TRWALQRQPPDPKQLEEEFLKIPSNFVSPEDLDIPGHASKDRY 73
Query: 197 TNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQ-YIATQGPLCSTVDDFWRMCWE 255
I P SR L +E DY+NANYI GY + YIATQGP+ +TV DFW M W+
Sbjct: 74 KTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQ 133
Query: 256 SRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGG 315
IVMLTQ + + ++KC YWP+++ +I +QD+ + + +L +
Sbjct: 134 EEVSLIVMLTQ-LREGKEKCVHYWPTEEETY--GPFQIRIQDMKECPEYTVRQLTIQYQE 190
Query: 316 EHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQH--PIVVHCSAGVGRTGTFI 373
E R + H F+ WPD P S L+ V A H PIVVHCSAG+GRTG FI
Sbjct: 191 ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFI 250
Query: 374 ALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
A Q+L + G VDIL IV LR R M+Q+ QY F++ + +Y
Sbjct: 251 ATRIGCQQL---KARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLALY 298
>pdb|1WCH|A Chain A, Crystal Structure Of Ptpl1 Human Tyrosine Phosphatase
Mutated In Colorectal Cancer - Evidence For A Second
Phosphotyrosine Substrate Recognition Pocket
Length = 315
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 157/281 (55%), Gaps = 17/281 (6%)
Query: 161 LDPDWIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDY 220
LD + E E+L+ + + + NR KNRY NI PYD++R P+ DE G Y
Sbjct: 46 LDQGIPSKELENLQELKPLDQCLIGQTKENRRKNRYKNILPYDATRV---PLGDEGG--Y 100
Query: 221 VNANYIGGYLSPRQ--YIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKY 278
+NA++I + + YIA QGPL +TV DFW+M WE ++ I M+TQ +E + KC +Y
Sbjct: 101 INASFIKIPVGKEEFVYIACQGPLPTTVGDFWQMIWEQKSTVIAMMTQEVEGEKIKCQRY 160
Query: 279 WPS--DQHPMRCADIEISLQDVCHYGSWVLSELRM--CRGGEHRMISHYHFTTWPDSGVP 334
WP+ + M + ++L + +V+ + + + E R ISH +FT WPD P
Sbjct: 161 WPNILGKTTMVSNRLRLALVRMQQLKGFVVRAMTLEDIQTREVRHISHLNFTAWPDHDTP 220
Query: 335 SSPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDIL 394
S P+ L++F+ S+ HI + PI+ HCSAG+GR+GT I +D VL + DI
Sbjct: 221 SQPDDLLTFI-SYMRHIHRS-GPIITHCSAGIGRSGTLICIDVVLGLISQDL---DFDIS 275
Query: 395 RIVHGLRRQRVLMVQSLAQYAFIYECVQVYLQGGVRHEERQ 435
+V +R QR MVQ+ QY F Y+ + +Y+ ++ EE Q
Sbjct: 276 DLVRCMRLQRHGMVQTEDQYIFCYQVI-LYVLTRLQAEEEQ 315
>pdb|3OLR|A Chain A, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|B Chain B, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|C Chain C, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|D Chain D, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OMH|A Chain A, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|B Chain B, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|C Chain C, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|D Chain D, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
Length = 313
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 130/263 (49%), Gaps = 7/263 (2%)
Query: 166 IAVEFEDLK------SVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSD 219
A EF LK + PTT AE N KNRY +I PYD SR +L + +E S
Sbjct: 43 FANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSS 102
Query: 220 YVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYW 279
Y+NAN+I G P+ YIATQGPL +T+ DFWRM WE IVM E + KC +YW
Sbjct: 103 YINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYW 162
Query: 280 PS-DQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPN 338
+ + +S + +++ L++ E R I +H+ WPD VPSS +
Sbjct: 163 AEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSID 222
Query: 339 TLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVH 398
++ + R + PI +H SAG GRTG A+D L + + + ++
Sbjct: 223 PILELIWDVRCYQEDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIR 282
Query: 399 GLRRQRVLMVQSLAQYAFIYECV 421
+R QR +VQ+ QY +Y V
Sbjct: 283 EMRTQRPSLVQTQEQYELVYNAV 305
>pdb|1ZC0|A Chain A, Crystal Structure Of Human Hematopoietic Tyrosine
Phosphatase (heptp) Catalytic Domain
Length = 309
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 147/291 (50%), Gaps = 14/291 (4%)
Query: 140 QDVTLH---NCSHPIPVTLFCTMTLDPDWIAVEFEDLKSVGRGQPTTAAELRCNRPKNRY 196
++VTLH HP+ T + P +E E LK ++ + K+RY
Sbjct: 17 REVTLHFLRTAGHPL--TRWALQRQPPSPKQLEEEFLKIPSNFVSPEDLDIPGHASKDRY 74
Query: 197 TNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQ-YIATQGPLCSTVDDFWRMCWE 255
I P SR L +E DY+NANYI GY + YIATQGP+ +TV DFW M W+
Sbjct: 75 KTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQ 134
Query: 256 SRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGG 315
IVMLTQ + + ++KC YWP+++ +I +QD+ + + +L +
Sbjct: 135 EEVSLIVMLTQ-LREGKEKCVHYWPTEEETY--GPFQIRIQDMKECPEYTVRQLTIQYQE 191
Query: 316 EHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQH--PIVVHCSAGVGRTGTFI 373
E R + H F+ WPD P S L+ V A H PIVVHCSAG+GRTG FI
Sbjct: 192 ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFI 251
Query: 374 ALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
A Q+L + G VDIL IV LR R M+Q+ QY F++ + +Y
Sbjct: 252 ATRIGCQQL---KARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLALY 299
>pdb|2A3K|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase, Ptpn7 (Heptp, Hematopoietic Protein
Tyrosine Phosphatase)
Length = 296
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 147/291 (50%), Gaps = 14/291 (4%)
Query: 140 QDVTLH---NCSHPIPVTLFCTMTLDPDWIAVEFEDLKSVGRGQPTTAAELRCNRPKNRY 196
++VTLH HP+ T + P +E E LK ++ + K+RY
Sbjct: 6 REVTLHFLRTAGHPL--TRWALQRQPPSPKQLEEEFLKIPSNFVSPEDLDIPGHASKDRY 63
Query: 197 TNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQ-YIATQGPLCSTVDDFWRMCWE 255
I P SR L +E DY+NANYI GY + YIATQGP+ +TV DFW M W+
Sbjct: 64 KTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQ 123
Query: 256 SRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGG 315
IVMLTQ + + ++KC YWP+++ +I +QD+ + + +L +
Sbjct: 124 EEVSLIVMLTQ-LREGKEKCVHYWPTEEETY--GPFQIRIQDMKECPEYTVRQLTIQYQE 180
Query: 316 EHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQH--PIVVHCSAGVGRTGTFI 373
E R + H F+ WPD P S L+ V A H PIVVHCSAG+GRTG FI
Sbjct: 181 ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFI 240
Query: 374 ALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
A Q+L + G VDIL IV LR R M+Q+ QY F++ + +Y
Sbjct: 241 ATRIGCQQL---KARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLALY 288
>pdb|2GP0|A Chain A, Heptp Catalytic Domain (Residues 44-339), S225d Mutant
Length = 309
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 147/291 (50%), Gaps = 14/291 (4%)
Query: 140 QDVTLH---NCSHPIPVTLFCTMTLDPDWIAVEFEDLKSVGRGQPTTAAELRCNRPKNRY 196
++VTLH HP+ T + P +E E LK ++ + K+RY
Sbjct: 17 REVTLHFLRTAGHPL--TRWALQRQPPSPKQLEEEFLKIPSNFVSPEDLDIPGHASKDRY 74
Query: 197 TNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQ-YIATQGPLCSTVDDFWRMCWE 255
I P SR L +E DY+NANYI GY + YIATQGP+ +TV DFW M W+
Sbjct: 75 KTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQ 134
Query: 256 SRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGG 315
IVMLTQ + + ++KC YWP+++ +I +QD+ + + +L +
Sbjct: 135 EEVSLIVMLTQ-LREGKEKCVHYWPTEEETY--GPFQIRIQDMKECPEYTVRQLTIQYQE 191
Query: 316 EHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQH--PIVVHCSAGVGRTGTFI 373
E R + H F+ WPD P S L+ V A H PIVVHCSAG+GRTG FI
Sbjct: 192 ERRDVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFI 251
Query: 374 ALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
A Q+L + G VDIL IV LR R M+Q+ QY F++ + +Y
Sbjct: 252 ATRIGCQQL---KARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLALY 299
>pdb|3B7O|A Chain A, Crystal Structure Of The Human Tyrosine Phosphatase Shp2
(Ptpn11) With An Accessible Active Site
Length = 316
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 146/253 (57%), Gaps = 18/253 (7%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPVD-DEEGSDYVNANYI--------GGYLSPRQYIATQG 240
N+ KNRY NI P+D +R L D +E SDY+NAN I + YIATQG
Sbjct: 60 NKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQG 119
Query: 241 PLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCH 300
L +TV+DFWRM ++ + IVM T+ +E+ + KC KYWP D++ ++ + + +++V
Sbjct: 120 CLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWP-DEYALKEYGV-MRVRNVKE 177
Query: 301 YGS--WVLSELRMCR---GGEHRMISHYHFTTWPDSGVPSSPNTLVSFV--LSFRTHISP 353
+ + L EL++ + G R + YHF TWPD GVPS P ++ F+ + +
Sbjct: 178 SAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIM 237
Query: 354 AQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQ 413
P+VVHCSAG+GRTGTFI +D ++ + +D+ + + +R QR MVQ+ AQ
Sbjct: 238 DAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQ 297
Query: 414 YAFIYECVQVYLQ 426
Y FIY VQ Y++
Sbjct: 298 YRFIYMAVQHYIE 310
>pdb|3O5X|A Chain A, Crystal Structure Of The Oncogenic Tyrosine Phosphatase
Shp2 Complexed With A Salicylic Acid-Based Small
Molecule Inhibitor
pdb|3MOW|A Chain A, Crystal Structure Of Shp2 In Complex With A Tautomycetin
Analog Ttn D- 1
Length = 276
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 146/253 (57%), Gaps = 18/253 (7%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPVD-DEEGSDYVNANYI--------GGYLSPRQYIATQG 240
N+ KNRY NI P+D +R L D +E SDY+NAN I + YIATQG
Sbjct: 13 NKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQG 72
Query: 241 PLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCH 300
L +TV+DFWRM ++ + IVM T+ +E+ + KC KYWP D++ ++ + + +++V
Sbjct: 73 CLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWP-DEYALKEYGV-MRVRNVKE 130
Query: 301 YGS--WVLSELRMCR---GGEHRMISHYHFTTWPDSGVPSSPNTLVSFV--LSFRTHISP 353
+ + L EL++ + G R + YHF TWPD GVPS P ++ F+ + +
Sbjct: 131 SAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIM 190
Query: 354 AQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQ 413
P+VVHCSAG+GRTGTFI +D ++ + +D+ + + +R QR MVQ+ AQ
Sbjct: 191 DAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQ 250
Query: 414 YAFIYECVQVYLQ 426
Y FIY VQ Y++
Sbjct: 251 YRFIYMAVQHYIE 263
>pdb|2PA5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|2PA5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|4GE2|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE2|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE6|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
pdb|4GE6|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
Length = 314
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 21/249 (8%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQYIATQGPLCSTVDDF 249
N KNRY ++ D +R KL +DY+NA+++ GY YI TQGPL +T DF
Sbjct: 52 NLEKNRYGDVPCLDQTRVKLTKRSGHTQTDYINASFMDGYKQKNAYIGTQGPLENTYRDF 111
Query: 250 WRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHP-MRCADIEIS---LQDVCHYGSWV 305
W M WE + IVM T+ E R KC +YWP ++ +R + ++ ++++ HY
Sbjct: 112 WLMVWEQKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTT 171
Query: 306 LSELRMCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPA----------- 354
L E+ + R ++H+ F +WPD GVPSS +L+ F+ R S A
Sbjct: 172 L-EIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQ 230
Query: 355 --QHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLA 412
+ PIVVHCSAG+GRTGTF +LD L +L E G++++ + V +R QR +Q+
Sbjct: 231 CPEPPIVVHCSAGIGRTGTFCSLDICLAQL---EELGTLNVFQTVSRMRTQRAFSIQTPE 287
Query: 413 QYAFIYECV 421
QY F Y+ +
Sbjct: 288 QYYFCYKAI 296
>pdb|3D42|A Chain A, Crystal Structure Of Heptp In Complex With A
Monophosphorylated Erk2 Peptide
pdb|3D44|A Chain A, Crystal Structure Of Heptp In Complex With A Dually
Phosphorylated Erk2 Peptide Mimetic
Length = 308
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 147/291 (50%), Gaps = 14/291 (4%)
Query: 140 QDVTLH---NCSHPIPVTLFCTMTLDPDWIAVEFEDLKSVGRGQPTTAAELRCNRPKNRY 196
++VTLH HP+ T + P +E E LK ++ + K+RY
Sbjct: 16 REVTLHFLRTAGHPL--TRWALQRQPPSPKQLEEEFLKIPSNFVSPEDLDIPGHASKDRY 73
Query: 197 TNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQ-YIATQGPLCSTVDDFWRMCWE 255
+I P SR L +E DY+NANYI GY + YIATQGP+ +TV DFW M W+
Sbjct: 74 KDILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQ 133
Query: 256 SRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGG 315
IVMLTQ + + ++KC YWP+++ +I +QD+ + + +L +
Sbjct: 134 EEVSLIVMLTQ-LREGKEKCVHYWPTEEETY--GPFQIRIQDMKECPEYTVRQLTIQYQE 190
Query: 316 EHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQH--PIVVHCSAGVGRTGTFI 373
E R + H F+ WPD P S L+ V A H PIVVH SAG+GRTG FI
Sbjct: 191 ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHSSAGIGRTGCFI 250
Query: 374 ALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
A Q+L + G VDIL IV LR R M+Q+ QY F++ + +Y
Sbjct: 251 ATRIGCQQL---KARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLALY 298
>pdb|2QDC|A Chain A, Crystal Structure Of The Heptp Catalytic Domain D236a
Mutant
Length = 309
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 146/291 (50%), Gaps = 14/291 (4%)
Query: 140 QDVTLH---NCSHPIPVTLFCTMTLDPDWIAVEFEDLKSVGRGQPTTAAELRCNRPKNRY 196
++VTLH HP+ T + P +E E LK ++ + K+RY
Sbjct: 17 REVTLHFLRTAGHPL--TRWALQRQPPSPKQLEEEFLKIPSNFVSPEDLDIPGHASKDRY 74
Query: 197 TNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQ-YIATQGPLCSTVDDFWRMCWE 255
I P SR L +E DY+NANYI GY + YIATQGP+ +TV DFW M W+
Sbjct: 75 KTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQ 134
Query: 256 SRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGG 315
IVMLTQ + + ++KC YWP+++ +I +QD+ + + +L +
Sbjct: 135 EEVSLIVMLTQ-LREGKEKCVHYWPTEEETY--GPFQIRIQDMKECPEYTVRQLTIQYQE 191
Query: 316 EHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQH--PIVVHCSAGVGRTGTFI 373
E R + H F+ WP P S L+ V A H PIVVHCSAG+GRTG FI
Sbjct: 192 ERRSVKHILFSAWPAHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFI 251
Query: 374 ALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
A Q+L + G VDIL IV LR R M+Q+ QY F++ + +Y
Sbjct: 252 ATRIGCQQL---KARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLALY 299
>pdb|3BRH|A Chain A, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
pdb|3BRH|B Chain B, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
Length = 310
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 129/263 (49%), Gaps = 7/263 (2%)
Query: 166 IAVEFEDLK------SVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSD 219
A EF LK + PTT AE N KNRY +I PYD SR +L + +E S
Sbjct: 24 FANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSS 83
Query: 220 YVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYW 279
Y+NAN+I G P+ YIATQGPL +T+ DFWRM WE IVM E + KC +YW
Sbjct: 84 YINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYW 143
Query: 280 PS-DQHPMRCADIEISLQDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPN 338
+ + +S + +++ L++ E R I +H+ WP VPSS +
Sbjct: 144 AEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSETRTIYQFHYKNWPAHDVPSSID 203
Query: 339 TLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVH 398
++ + R + PI +H SAG GRTG A+D L + + + ++
Sbjct: 204 PILELIWDVRCYQEDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIR 263
Query: 399 GLRRQRVLMVQSLAQYAFIYECV 421
+R QR +VQ+ QY +Y V
Sbjct: 264 EMRTQRPSLVQTQEQYELVYNAV 286
>pdb|2HVL|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant
pdb|2QDP|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant Crystallized In Ammonium Acetate
Length = 309
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 146/291 (50%), Gaps = 14/291 (4%)
Query: 140 QDVTLH---NCSHPIPVTLFCTMTLDPDWIAVEFEDLKSVGRGQPTTAAELRCNRPKNRY 196
++VTLH HP+ T + P +E E LK ++ + K+RY
Sbjct: 17 REVTLHFLRTAGHPL--TRWALQRQPPSPKQLEEEFLKIPSNFVSPEDLDIPGHASKDRY 74
Query: 197 TNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQ-YIATQGPLCSTVDDFWRMCWE 255
I P SR L +E DY+NANYI GY + YIATQGP+ +TV DFW M W+
Sbjct: 75 KTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQ 134
Query: 256 SRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGG 315
IVMLTQ + + ++KC YWP+++ +I +QD+ + + +L +
Sbjct: 135 EEVSLIVMLTQ-LREGKEKCVHYWPTEEETY--GPFQIRIQDMKECPEYTVRQLTIQYQE 191
Query: 316 EHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQH--PIVVHCSAGVGRTGTFI 373
E R + H F+ WPD P S L+ V A H PIVVH SAG+GRTG FI
Sbjct: 192 ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHSSAGIGRTGCFI 251
Query: 374 ALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
A Q+L + G VDIL IV LR R M+Q+ QY F++ + +Y
Sbjct: 252 ATRIGCQQL---KARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLALY 299
>pdb|2OC3|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Protein
Tyrosine Phosphatase Non-Receptor Type 18
Length = 303
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 136/263 (51%), Gaps = 7/263 (2%)
Query: 166 IAVEFEDLKSV-----GRGQPTTAAELRC-NRPKNRYTNIFPYDSSRYKLQPVDDEEGSD 219
+A EF D+++ G +T A R N KNRY ++ PYD +R L + +E SD
Sbjct: 30 LAGEFSDIQACSAAWKADGVCSTVAGSRPENVRKNRYKDVLPYDQTRVILSLLQEEGHSD 89
Query: 220 YVNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYW 279
Y+N N+I G YIATQGPL T+ DFWR+ WE I+M + IE R +C +YW
Sbjct: 90 YINGNFIRGVDGSLAYIATQGPLPHTLLDFWRLVWEFGVKVILMACREIENGRKRCERYW 149
Query: 280 PSDQHPMRCADIEISL-QDVCHYGSWVLSELRMCRGGEHRMISHYHFTTWPDSGVPSSPN 338
+Q P++ I+L ++ +L L++ E R + + +WPD GVPSSP+
Sbjct: 150 AQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKESRSVYQLQYMSWPDRGVPSSPD 209
Query: 339 TLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVH 398
+++ V R P+ VHCSAG GRTG +D V Q L + +V
Sbjct: 210 HMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVL 269
Query: 399 GLRRQRVLMVQSLAQYAFIYECV 421
+R+QR VQ+ QY F+Y V
Sbjct: 270 KMRKQRPAAVQTEEQYRFLYHTV 292
>pdb|2SHP|A Chain A, Tyrosine Phosphatase Shp-2
pdb|2SHP|B Chain B, Tyrosine Phosphatase Shp-2
Length = 525
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 145/253 (57%), Gaps = 18/253 (7%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPVD-DEEGSDYVNANYI--------GGYLSPRQYIATQG 240
N+ KNRY NI P+D +R L D +E SDY+NAN I + YIATQG
Sbjct: 273 NKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQG 332
Query: 241 PLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCH 300
L +TV+DFWRM ++ + IVM T+ +E+ + KC KYWP D++ ++ + + +++V
Sbjct: 333 CLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWP-DEYALKEYGV-MRVRNVKE 390
Query: 301 YGS--WVLSELRMCR---GGEHRMISHYHFTTWPDSGVPSSPNTLVSFV--LSFRTHISP 353
+ + L EL++ + G R + YHF TWPD GVPS P ++ F+ + +
Sbjct: 391 SAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIM 450
Query: 354 AQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQ 413
P+VVHCSAG+GRTGTFI +D ++ + +D+ + + +R QR MVQ+ AQ
Sbjct: 451 DAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQ 510
Query: 414 YAFIYECVQVYLQ 426
Y IY VQ Y++
Sbjct: 511 YRSIYMAVQHYIE 523
>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase, Non-Receptor Type 3
Length = 287
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 144/273 (52%), Gaps = 8/273 (2%)
Query: 161 LDPDWIAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDY 220
L+ + ++FE L G T A+L N KNRY ++ PYD++R LQ +D + Y
Sbjct: 15 LESGTVLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNEDYINASY 74
Query: 221 VNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWP 280
VN L +YIATQGPL T FW++ W+ + IVMLT E+ R KC++YWP
Sbjct: 75 VNMEIPAANLV-NKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWP 133
Query: 281 SDQHPMRCADIEISLQDVCHYGSWVLSELRM--CRGGEHRMISHYHFTTWPDSGVPSSPN 338
M I Q ++V E+ + + GE ++H + WPD GVP +
Sbjct: 134 DPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDHGVPDDSS 193
Query: 339 TLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVH 398
+ FV R+ + P++VHCSAG+GRTG + ++T + +E + L IV
Sbjct: 194 DFLEFVNYVRS-LRVDSEPVLVHCSAGIGRTGVLVTMETAMCL---TERNLPIYPLDIVR 249
Query: 399 GLRRQRVLMVQSLAQYAFIYECV-QVYLQGGVR 430
+R QR +MVQ+ +QY F+ E + +VY +G V+
Sbjct: 250 KMRDQRAMMVQTSSQYKFVCEAILRVYEEGLVQ 282
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 144/272 (52%), Gaps = 15/272 (5%)
Query: 166 IAVEFEDLKSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANY 225
+ +F+ L G + A+L N KNRY +I PYD++R L+ DY+NANY
Sbjct: 47 VLTQFDQLYRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVILKG-----NEDYINANY 101
Query: 226 IGGYLSP----RQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPS 281
I + QYIA QGPL T DFW+M WE + +VMLT +E+ R KC++YWP
Sbjct: 102 INMEIPSSSIINQYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPE 161
Query: 282 DQHPMRCADIEISLQDVCHYGSWVLSELRMC--RGGEHRMISHYHFTTWPDSGVPSSPNT 339
+++ +++ ++ + E R ++ + WPD GVP +
Sbjct: 162 PTGSSSYGCYQVTCHSEEGNTAYIFRKMTLFNQEKNESRPLTQIQYIAWPDHGVPDDSSD 221
Query: 340 LVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHG 399
+ FV R + + P+VVHCSAG+GRTG I ++T + + ++ +DI+R
Sbjct: 222 FLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRT--- 278
Query: 400 LRRQRVLMVQSLAQYAFIYECV-QVYLQGGVR 430
+R QR +M+Q+ +QY F+ E + +VY +G V+
Sbjct: 279 MRDQRAMMIQTPSQYRFVCEAILKVYEEGFVK 310
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 133/236 (56%), Gaps = 10/236 (4%)
Query: 193 KNRYTNIFPYDSSRYKLQPVDDEEG-SDYVNANYIGGYLSP-RQYIATQGPLCSTVDDFW 250
KNRY I P SR L+P + + S Y+NANYI GY + +IATQGP+ +TVDDFW
Sbjct: 46 KNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPMINTVDDFW 105
Query: 251 RMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELR 310
+M W+ +P IVM+T+ EK+ +KC YWP + +E+ + V ++ + L
Sbjct: 106 QMVWQEDSPVIVMITKLKEKN-EKCVLYWPEKRGIY--GKVEVLVISVNECDNYTIRNLV 162
Query: 311 MCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTH--ISPAQHPIVVHCSAGVGR 368
+ +G + + HY +T+WPD P S L+ +L S + P+VVHCSAG+GR
Sbjct: 163 LKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASQGRGPVVVHCSAGIGR 222
Query: 369 TGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
TG FIA Q+L + G VD L IV LR R MVQ+ QY F++ + +Y
Sbjct: 223 TGCFIATSIGCQQL---KEEGVVDALSIVCQLRMDRGGMVQTSEQYEFVHHALCLY 275
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 133/236 (56%), Gaps = 10/236 (4%)
Query: 193 KNRYTNIFPYDSSRYKLQPVDDEEG-SDYVNANYIGGYLSP-RQYIATQGPLCSTVDDFW 250
KNRY I P SR L+P + + S Y+NANYI GY + +IATQGP+ +TV+DFW
Sbjct: 59 KNRYKTILPNPLSRVCLRPKNITDSLSTYINANYIRGYSGKEKAFIATQGPMINTVNDFW 118
Query: 251 RMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELR 310
+M W+ +P IVM+T+ EK+ +KC YWP + +E+ + V ++ + L
Sbjct: 119 QMVWQEDSPVIVMITKLKEKN-EKCVLYWPEKRGIY--GKVEVLVTGVTECDNYTIRNLV 175
Query: 311 MCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTH--ISPAQHPIVVHCSAGVGR 368
+ +G + + HY +T+WPD P S L+ +L S + P+VVHCSAG+GR
Sbjct: 176 LKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGR 235
Query: 369 TGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
TG FIA Q+L + G VD L IV LR R MVQ+ QY F++ + ++
Sbjct: 236 TGCFIATSIGCQQL---KEEGVVDALSIVCQLRVDRGGMVQTSEQYEFVHHALCLF 288
>pdb|2QDM|A Chain A, Crystal Structure Of The Heptp Catalytic Domain
C270sD236AQ314A Mutant
Length = 309
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 144/291 (49%), Gaps = 14/291 (4%)
Query: 140 QDVTLH---NCSHPIPVTLFCTMTLDPDWIAVEFEDLKSVGRGQPTTAAELRCNRPKNRY 196
++VTLH HP+ T + P +E E LK ++ + K+RY
Sbjct: 17 REVTLHFLRTAGHPL--TRWALQRQPPSPKQLEEEFLKIPSNFVSPEDLDIPGHASKDRY 74
Query: 197 TNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQ-YIATQGPLCSTVDDFWRMCWE 255
I P SR L +E DY+NANYI GY + YIATQGP+ +TV DFW M W+
Sbjct: 75 KTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQ 134
Query: 256 SRTPAIVMLTQCIEKHRDKCYKYWPSDQHPMRCADIEISLQDVCHYGSWVLSELRMCRGG 315
IVMLTQ + + ++KC YWP+++ +I +QD+ + + +L +
Sbjct: 135 EEVSLIVMLTQ-LREGKEKCVHYWPTEEETY--GPFQIRIQDMKECPEYTVRQLTIQYQE 191
Query: 316 EHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQH--PIVVHCSAGVGRTGTFI 373
E R + H F+ WP P S L+ V A H PIVVH SAG+GRTG FI
Sbjct: 192 ERRSVKHILFSAWPAHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHSSAGIGRTGCFI 251
Query: 374 ALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVY 424
A Q+L + G VDIL IV LR R M+ + QY F++ + +Y
Sbjct: 252 ATRIGCQQL---KARGEVDILGIVCQLRLDRGGMIATAEQYQFLHHTLALY 299
>pdb|2QEP|A Chain A, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
pdb|2QEP|B Chain B, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
Length = 304
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 134/250 (53%), Gaps = 9/250 (3%)
Query: 178 RGQPTTA--AELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYVNANYIGGYLSPRQ- 234
+ +P ++ A+ N PKNR + YD SR L+ + SDY+NA+ I + PR
Sbjct: 43 QAEPNSSFVAQREENVPKNRSLAVLTYDHSRVLLKAENSHSHSDYINASPIMDH-DPRNP 101
Query: 235 -YIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQHPM-RCADIE 292
YIATQGPL +TV DFW+M WES IVMLT E +CY YWP + + ++
Sbjct: 102 AYIATQGPLPATVADFWQMVWESGCVVIVMLTPLAENGVRQCYHYWPDEGSNLYHIYEVN 161
Query: 293 ISLQDVCHYGSWVLS-ELRMCRGGEHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHI 351
+ + + V S L+ + E R ++ +HF +W D GVPSS +L+ F
Sbjct: 162 LVSEHIWCEDFLVRSFYLKNLQTNETRTVTQFHFLSWYDRGVPSSSRSLLDFRRKVNKCY 221
Query: 352 SPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSL 411
PI+VHCS G GR+GT++ +D VL ++ ++GA +DI + LR QR MVQ+
Sbjct: 222 RGRSCPIIVHCSDGAGRSGTYVLIDMVLNKM--AKGAKEIDIAATLEHLRDQRPGMVQTK 279
Query: 412 AQYAFIYECV 421
Q+ F V
Sbjct: 280 EQFEFALTAV 289
>pdb|2I1Y|A Chain A, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
pdb|2I1Y|B Chain B, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
Length = 301
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 139/264 (52%), Gaps = 10/264 (3%)
Query: 164 DWIAVEFEDLKSVGRGQPTT--AAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSDYV 221
D +A E++ L + + +P T A+ N KNR+ + PYD +R KL+ SDY+
Sbjct: 29 DRLAKEWQALCAY-QAEPNTCATAQGEGNIKKNRHPDFLPYDHARIKLKVESSPSRSDYI 87
Query: 222 NANYIGGYLSPRQ--YIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYW 279
NA+ I + PR YIATQGPL T+ DFW+M WES IVMLT +E +C +YW
Sbjct: 88 NASPIIEH-DPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVEDGVKQCDRYW 146
Query: 280 PSDQHPM-RCADIEISLQDVCHYGSWVLS-ELRMCRGGEHRMISHYHFTTWPDSGVPSSP 337
P + + ++ + + + V S L+ + E R ++ +HF +WP G P+S
Sbjct: 147 PDEGASLYHVYEVNLVSEHIWCEDFLVRSFYLKNVQTQETRTLTQFHFLSWPAEGTPAST 206
Query: 338 NTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIV 397
L+ F PI+VHCS G GRTGT+I +D VL R+ ++G +DI +
Sbjct: 207 RPLLDFRRKVNKCYRGRSCPIIVHCSDGAGRTGTYILIDMVLNRM--AKGVKEIDIAATL 264
Query: 398 HGLRRQRVLMVQSLAQYAFIYECV 421
+R QR +V+S Q+ F V
Sbjct: 265 EHVRDQRPGLVRSKDQFEFALTAV 288
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 31/288 (10%)
Query: 161 LDPDWIAVEFEDL-KSVGRGQPTTAAELRCNRPKNRYTNIFPYDSSRYKLQPVDDEEGSD 219
L+ + E+E + K G +TAA L N ++R + PY+ +R +L P E +
Sbjct: 42 LEEGMVFTEYEQIPKKKANGIFSTAA-LPENAERSRIREVVPYEENRVELIPTK-ENNTG 99
Query: 220 YVNANYI----GGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQCIEKHRDKC 275
Y+NA++I GG + YIATQGPL T DFW+M WE I M+T E R K
Sbjct: 100 YINASHIKVVVGG--AEWHYIATQGPLPHTCHDFWQMVWEQGVNVIAMVTAEEEGGRTKS 157
Query: 276 YKYWP---SDQHPMRCADIEISLQ----DVCHYGSWVLSELRMCRGGEHRMISHYHFTTW 328
++YWP S +++ + VC+ + + +++ G+ R + H +T W
Sbjct: 158 HRYWPKLGSKHSSATYGKFKVTTKFRTDSVCYATTGL--KVKHLLSGQERTVWHLQYTDW 215
Query: 329 PDSGVPSSPNTLVSF---VLSFRTHISPAQH-------PIVVHCSAGVGRTGTFIALDTV 378
PD G P +S+ + S R H + PIVVHCSAGVGRTG I + +
Sbjct: 216 PDHGCPEDVQGFLSYLEEIQSVRRHTNSMLEGTKNRHPPIVVHCSAGVGRTGVLILSELM 275
Query: 379 LQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLAQYAFIYECVQVYLQ 426
+ L ++E +LR+ LR QR+ M+Q++AQY F+Y+ + +LQ
Sbjct: 276 IYCLEHNEKVEVPMMLRL---LREQRMFMIQTIAQYKFVYQVLIQFLQ 320
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 36/251 (14%)
Query: 190 NRPKNRYTNIFPYDSSRYKLQPVDDEEGSD---YVNANYIGGYLSPRQYIATQGPLCSTV 246
NR KNRY +I +++ Y V D G+ Y+N N I L P +++A Q P+ +
Sbjct: 45 NRHKNRYLDILANEATLYP--QVTDAPGASTPYYINGNLIDLDL-PHKFVACQAPVVQGI 101
Query: 247 DDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSD-----------------QHPMRCA 289
DF M +E + ++M+T+ E K +YWP + + P +
Sbjct: 102 PDFLAMLYEKKISLVIMVTKLEEGGFVKADRYWPEERGSGSIAVSGNCGLTISEDPGKAY 161
Query: 290 DIEISLQDVCHYGSWVLSELRMCRGGE--HRMISHYHFTTWPDSGVPSSPNTLVSFVLSF 347
++E L+ Y L + R E H+ + +T WPD G+P S +L + + +
Sbjct: 162 EVEDELKITRRY-------LILQRADEPPHKF-TQVQYTGWPDHGIPQSATSLEALLTNV 213
Query: 348 RTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLM 407
+ SP P+VVHCSAG+GRTGT I L L + + +V +RRQR M
Sbjct: 214 KN--SPTTVPVVVHCSAGIGRTGTLIGAYAALTHLERGTLTDTT-VYDVVSAMRRQRFGM 270
Query: 408 VQSLAQYAFIY 418
VQ + QY IY
Sbjct: 271 VQRMEQYFVIY 281
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 190 NRPKNRYTNIFPYDSSRYK--LQPVDDEEGS-DYVNANYIGGYLSPRQYIATQGPLCSTV 246
NR KNRY +I + + Y L+ V + G Y+N N I L P ++A Q P+ V
Sbjct: 45 NRHKNRYLDILANEETIYPPVLKAVGAQPGRYPYINGNLIDLDL-PHTFVACQAPVPQGV 103
Query: 247 DDFWRMCWESRTPAIVMLTQCIEKHRDKCYKYWPSDQH-----PMRCAD-IEISLQDVCH 300
DF E + +VMLT+ E K +YWP ++ P D I+++
Sbjct: 104 PDFLETLSEKKVDLVVMLTKLREGGVLKAERYWPEEEEDSLSFPESGHDAIKVTRDAEAS 163
Query: 301 YGSWVLSELRMCR--------GGEHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHIS 352
Y V +EL + R G + + WPD GVP S + + + ++
Sbjct: 164 Y--EVDAELDIVRRPLVIHVPGKPMHRVLQVQYVGWPDHGVPESAASFDELLSVIKNCVT 221
Query: 353 PAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQRVLMVQSLA 412
+ PI+VHCSAG+GRTGT I L + S + IV ++++R MVQ L
Sbjct: 222 TS--PILVHCSAGIGRTGTLIGAYAALLHIERGILTDST-VYSIVAAMKQKRFGMVQRLE 278
Query: 413 QYAFIYECV 421
QYA IY V
Sbjct: 279 QYAVIYMTV 287
>pdb|1PA9|A Chain A, Yersinia Protein-Tyrosine Phosphatase Complexed With Pncs
(Yop51,Pasteurella X,Ptpase,Yop51delta162) (Catalytic
Domain, Residues 163-468) Mutant With Cys 235 Replaced
By Arg (C235r)
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 24/175 (13%)
Query: 221 VNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQC--IEKHRDKCYKY 278
+NANYI + + IA Q PL S ++ +RM E+RTP + +L I R Y
Sbjct: 60 LNANYI--QVGNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 117
Query: 279 WPSDQHPMRCADIEISLQDVCHYGSWVLSEL--RMCRGGEHRMISH--YHFTTWPDSGVP 334
+ +E + G +++++ R + IS H WPD
Sbjct: 118 F-RQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQTAV 176
Query: 335 SSPNT--LVSFV-----LSFRTHISPAQHPI--------VVHCSAGVGRTGTFIA 374
SS T L S V + S + V+HC AGVGRT I
Sbjct: 177 SSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIG 231
>pdb|1XXV|A Chain A, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
pdb|1XXV|B Chain B, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 24/175 (13%)
Query: 221 VNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQC--IEKHRDKCYKY 278
+NANYI + + IA Q PL S ++ +RM E+RTP + +L I R Y
Sbjct: 82 LNANYI--QVGNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 139
Query: 279 WPSDQHPMRCADIEISLQDVCHYGSWVLSEL--RMCRGGEHRMISH--YHFTTWPDSGVP 334
+ +E + G +++++ R + IS H WPD
Sbjct: 140 F-RQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQTAV 198
Query: 335 SSPNT--LVSFV-----LSFRTHISPAQHPI--------VVHCSAGVGRTGTFIA 374
SS T L S V + S + V+HC AGVGRT I
Sbjct: 199 SSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIG 253
>pdb|1QZ0|A Chain A, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|1QZ0|B Chain B, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|2I42|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
Complexed With Vanadate, A Transition State Analogue
pdb|1YTN|A Chain A, Hydrolase
pdb|1YTW|A Chain A, Yersinia Ptpase Complexed With Tungstate
pdb|2Y2F|A Chain A, Crystal Structure Of Yersinia Pestis Yoph In Complex With
An Aminooxy-Containing Platform Compound For Inhibitor
Design
pdb|2YDU|A Chain A, Crystal Structure Of Yoph In Complex With
3-(1,1-Dioxido-3-Oxoisothiazolidin-5-Yl)benzaldeyde
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 24/175 (13%)
Query: 221 VNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQC--IEKHRDKCYKY 278
+NANYI + + IA Q PL S ++ +RM E+RTP + +L I R Y
Sbjct: 82 LNANYI--QVGNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 139
Query: 279 WPSDQHPMRCADIEISLQDVCHYGSWVLSEL--RMCRGGEHRMISH--YHFTTWPDSGVP 334
+ +E + G +++++ R + IS H WPD
Sbjct: 140 F-RQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQTAV 198
Query: 335 SSPNT--LVSFV-----LSFRTHISPAQHPI--------VVHCSAGVGRTGTFIA 374
SS T L S V + S + V+HC AGVGRT I
Sbjct: 199 SSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIG 253
>pdb|1YPT|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|1YPT|B Chain B, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|3BLU|A Chain A, Crystal Structure Yoph Complexed With Inhibitor Pvs
pdb|3BLT|A Chain A, Crystal Structures Of Yoph Complexed With Pvsn And Pvs,
Inhibitors Of Yoph Which Co-Valent Bind To Cys Of Active
Site
Length = 305
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 24/175 (13%)
Query: 221 VNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQC--IEKHRDKCYKY 278
+NANYI + + IA Q PL S ++ +RM E+RTP + +L I R Y
Sbjct: 81 LNANYI--QVGNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 138
Query: 279 WPSDQHPMRCADIEISLQDVCHYGSWVLSEL--RMCRGGEHRMISH--YHFTTWPDSGVP 334
+ +E + G +++++ R + IS H WPD
Sbjct: 139 F-RQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQTAV 197
Query: 335 SSPNT--LVSFV-----LSFRTHISPAQHPI--------VVHCSAGVGRTGTFIA 374
SS T L S V + S + V+HC AGVGRT I
Sbjct: 198 SSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIG 252
>pdb|3U96|A Chain A, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
pdb|3U96|B Chain B, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 24/175 (13%)
Query: 221 VNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQC--IEKHRDKCYKY 278
+NANYI + + IA Q PL S ++ +RM E+RTP + +L I R Y
Sbjct: 82 LNANYI--QVGNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 139
Query: 279 WPSDQHPMRCADIEISLQDVCHYGSWVLSEL--RMCRGGEHRMIS--HYHFTTWPD---- 330
+ +E + G +++++ R + IS H WPD
Sbjct: 140 F-RQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWPDFTAV 198
Query: 331 -SGVPSSPNTLVSFVLSFRTHI--SPAQHPI--------VVHCSAGVGRTGTFIA 374
S V + +LV + ++ S + V+HC AGVGRT I
Sbjct: 199 SSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIG 253
>pdb|1YTS|A Chain A, A Ligand-Induced Conformational Change In The Yersinia
Protein Tyrosine Phosphatase
Length = 278
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 24/175 (13%)
Query: 221 VNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQC--IEKHRDKCYKY 278
+NANYI + + IA Q PL S ++ +RM E+RTP + +L I R Y
Sbjct: 54 LNANYI--QVGNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 111
Query: 279 WPSDQHPMRCADIEISLQDVCHYGSWVLSEL--RMCRGGEHRMIS--HYHFTTWPDSGVP 334
+ +E + G +++++ R + IS H WPD
Sbjct: 112 F-RQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQTAV 170
Query: 335 SSPNT--LVSFV-----LSFRTHISPAQHPI--------VVHCSAGVGRTGTFIA 374
SS T L S V + S + V+H AGVGRT I
Sbjct: 171 SSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLIG 225
>pdb|3F99|A Chain A, W354f Yersinia Enterocolitica Ptpase Apo Form
pdb|3F9A|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Tungstate
pdb|3F9B|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Divanadate
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 68/175 (38%), Gaps = 24/175 (13%)
Query: 221 VNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQC--IEKHRDKCYKY 278
+NANYI + + IA Q PL S ++ +RM E+RTP + +L I R Y
Sbjct: 82 LNANYI--QVGNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 139
Query: 279 WPSDQHPMRCADIEISLQDVCHYGSWVLSEL--RMCRGGEHRMIS--HYHFTTWPDSGVP 334
+ +E + G +++++ R + IS H +PD
Sbjct: 140 F-RQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNFPDQTAV 198
Query: 335 SSPNT--LVSFV-----LSFRTHISPAQHPI--------VVHCSAGVGRTGTFIA 374
SS T L S V + S + V+HC AGVGRT I
Sbjct: 199 SSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIG 253
>pdb|3BM8|A Chain A, Crystal Structure Of Yoph Mutant D356a Complexed With
Irreversible Inhibitor Pvsn
Length = 305
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 24/175 (13%)
Query: 221 VNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQC--IEKHRDKCYKY 278
+NANYI + + IA Q PL S ++ +RM E+RTP + +L I R Y
Sbjct: 81 LNANYI--QVGNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 138
Query: 279 WPSDQHPMRCADIEISLQDVCHYGSWVLSEL--RMCRGGEHRMIS--HYHFTTWPDSGVP 334
+ +E + G +++++ R + IS H WP
Sbjct: 139 F-RQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWPAQTAV 197
Query: 335 SSPNT--LVSFV-----LSFRTHISPAQHPI--------VVHCSAGVGRTGTFIA 374
SS T L S V + S + V+HC AGVGRT I
Sbjct: 198 SSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIG 252
>pdb|1LYV|A Chain A, High-Resolution Structure Of The Catalytically Inactive
Yersinia Tyrosine Phosphatase C403a Mutant In Complex
With Phosphate
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 24/175 (13%)
Query: 221 VNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQC--IEKHRDKCYKY 278
+NANYI + + IA Q PL S ++ +RM E+RTP + +L I R Y
Sbjct: 82 LNANYI--QVGNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 139
Query: 279 WPSDQHPMRCADIEISLQDVCHYGSWVLSEL--RMCRGGEHRMIS--HYHFTTWPDSGVP 334
+ +E + G +++++ R + IS H WPD
Sbjct: 140 F-RQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQTAV 198
Query: 335 SSPNT--LVSFV-----LSFRTHISPAQHPI--------VVHCSAGVGRTGTFIA 374
SS T L S V + S + V+H AGVGRT I
Sbjct: 199 SSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLIG 253
>pdb|1XXP|A Chain A, Yersinia Yoph (Residues 163-468) C403s Binds
Phosphotyrosyl Peptide At Two Sites
pdb|1XXP|B Chain B, Yersinia Yoph (Residues 163-468) C403s Binds
Phosphotyrosyl Peptide At Two Sites
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 24/175 (13%)
Query: 221 VNANYIGGYLSPRQYIATQGPLCSTVDDFWRMCWESRTPAIVMLTQC--IEKHRDKCYKY 278
+NANYI + + IA Q PL S ++ +RM E+RTP + +L I R Y
Sbjct: 82 LNANYI--QVGNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDY 139
Query: 279 WPSDQHPMRCADIEISLQDVCHYGSWVLSEL--RMCRGGEHRMIS--HYHFTTWPDSGVP 334
+ +E + G +++++ R + IS H WPD
Sbjct: 140 F-RQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQTAV 198
Query: 335 SSPNT--LVSFV-----LSFRTHISPAQHPI--------VVHCSAGVGRTGTFIA 374
SS T L S V + S + V+H AGVGRT I
Sbjct: 199 SSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLIG 253
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 17/91 (18%)
Query: 329 PDSGVPSSPN--TLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSE 386
PD GVPS T++ ++LS + +VHC G+GRTGT +A +L E
Sbjct: 68 PDGGVPSDSQFLTIMKWLLS-------EKEGNLVHCVGGIGRTGTILASYLILTEGLEVE 120
Query: 387 GAGSVDILRIVHGLRRQRVLMVQSLAQYAFI 417
A +D +R+V R VQ+ Q F+
Sbjct: 121 SA--IDEVRLV------RPGAVQTYEQEMFL 143
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 323 YHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRL 382
+H + D P+ + V F A+ I VHC AG+GRTGT IA + +
Sbjct: 242 HHDLFFADGSTPTD-----AIVKEFLDICENAEGAIAVHCKAGLGRTGTLIA--CYIMKH 294
Query: 383 YNSEGAGSVDILRI-----VHGLRRQRVLMVQS 410
Y A ++ +RI V G ++Q ++M Q+
Sbjct: 295 YRMTAAETIAWVRICRPGSVIGPQQQFLVMKQT 327
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 17/91 (18%)
Query: 329 PDSGVPSSPN--TLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSE 386
PD GVPS T++ ++LS + +VH G+GRTGT +A +L E
Sbjct: 68 PDGGVPSDSQFLTIMKWLLS-------EKEGNLVHSVGGIGRTGTILASYLILTEGLEVE 120
Query: 387 GAGSVDILRIVHGLRRQRVLMVQSLAQYAFI 417
A +D +R+V R VQ+ Q F+
Sbjct: 121 SA--IDEVRLV------RPGAVQTYEQEMFL 143
>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
Length = 334
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 316 EHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHI-SPAQHPIVVHCSAGVGRTGTFIA 374
E + +H + D VP+ + L+ F+ + + S H I +HC AG GRTGT ++
Sbjct: 75 ETKFDNHVYRVMIDDHNVPTLVD-LLKFIDDAKVWMTSDPDHVIAIHCKAGKGRTGTLVS 133
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 323 YHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRL 382
+H + D P+ + V F A+ I VH AG+GRTGT IA + +
Sbjct: 242 HHDLFFADGSTPTD-----AIVKEFLDICENAEGAIAVHSKAGLGRTGTLIA--CYIMKH 294
Query: 383 YNSEGAGSVDILRI-----VHGLRRQRVLMVQS 410
Y A ++ +RI V G ++Q ++M Q+
Sbjct: 295 YRMTAAETIAWVRICRPGSVIGPQQQFLVMKQT 327
>pdb|1RXD|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|C Chain C, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
Length = 159
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 289 ADIEISLQDVCHYGSWVLSELRMCRGGEHRMISH---YHFTTWP-DSGVPSSPNTLVSFV 344
A + ++++ YG V + +R+C + H WP D G P S N +V
Sbjct: 27 ATLNKFIEELKKYG--VTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPS-NQIVDDW 83
Query: 345 LSFRTHISPAQHP---IVVHCSAGVGRTGTFIALDTV 378
LS I + P I VHC AG+GR +AL +
Sbjct: 84 LSL-VKIKFREEPGCCIAVHCVAGLGRAPVLVALALI 119
>pdb|1ZCK|A Chain A, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|B Chain B, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|C Chain C, Native Structure Prl-1 (Ptp4a1)
Length = 154
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 289 ADIEISLQDVCHYGSWVLSELRMCRGGEHRMISH---YHFTTWP-DSGVPSSPNTLVSFV 344
A + ++++ YG V + +R+C + H WP D G P S N +V
Sbjct: 22 ATLNKFIEELKKYG--VTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPS-NQIVDDW 78
Query: 345 LSFRTHISPAQHP---IVVHCSAGVGRTGTFIALDTV 378
LS I + P I VHC AG+GR +AL +
Sbjct: 79 LSL-VKIKFREEPGCCIAVHCVAGLGRAPVLVALALI 114
>pdb|3AWE|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
Length = 334
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 316 EHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHI-SPAQHPIVVHCSAGVGRTGTFIA 374
E + +H + D VP+ + L+ F+ + + S H I +HC G GRTGT ++
Sbjct: 75 ETKFDNHVYRVMIDDHNVPTLVD-LLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVS 133
>pdb|1X24|A Chain A, Prl-1 (Ptp4a)
pdb|1X24|B Chain B, Prl-1 (Ptp4a)
Length = 180
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 324 HFTTWP-DSGVPSSPNTLVSFVLSFRTHISPAQHP---IVVHCSAGVGRTGTFIALDTV 378
H WP D G P S N +V LS I + P I VHC AG+GR +AL +
Sbjct: 84 HVLDWPFDDGAPPS-NQIVDDWLSL-VKIKFREEPGCCIAVHCVAGLGRAPVLVALALI 140
>pdb|3RZ2|A Chain A, Crystal Of Prl-1 Complexed With Peptide
pdb|3RZ2|B Chain B, Crystal Of Prl-1 Complexed With Peptide
Length = 189
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 324 HFTTWP-DSGVPSSPNTLVSFVLSFRTHISPAQHP---IVVHCSAGVGRTGTFIALDTV 378
H WP D G P S N +V LS I + P I VHC AG+GR +AL +
Sbjct: 84 HVLDWPFDDGAPPS-NQIVDDWLSL-VKIKFREEPGCCIAVHCVAGLGRAPVLVALALI 140
>pdb|3AWF|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
Length = 346
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 316 EHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHI-SPAQHPIVVHCSAGVGRTGTFIA 374
E + +H + D VP+ + L+ F+ + + S H I +HC G GRTGT ++
Sbjct: 87 ETKFDNHVYRVMIDDHNVPTLVD-LLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVS 145
>pdb|3V0I|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576, E411f
Length = 324
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 316 EHRMISHYHFTTWPDSGVPSSPNTLVSFVLSFRTHI-SPAQHPIVVHCSAGVGRTGTFIA 374
E + +H + D VP+ + L+ F+ + + S H I +HC G GRTGT ++
Sbjct: 65 ETKFDNHVYRVMIDDHNVPTLVD-LLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVS 123
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 344 VLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQ 403
V +F + P++VHC+AGV R+G I L + + N E + L + H R
Sbjct: 114 VTAFLSKCDQRNEPVLVHCAAGVNRSGAXI-LAYLXSK--NKESLPXLYFLYVYHSXRDL 170
Query: 404 RVLMVQS 410
R V++
Sbjct: 171 RGAFVEN 177
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 344 VLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQ 403
V +F + P++VHC AGV R+G I L + + N E + + L + H R
Sbjct: 93 VTAFLSKCDQRNEPVLVHCVAGVNRSGAXI-LAYLXSK--NKESSPXLYFLYVYHSXRDL 149
Query: 404 RVLMVQS 410
R V++
Sbjct: 150 RGAFVEN 156
>pdb|1G4U|S Chain S, Crystal Structure Of The Salmonella Tyrosine Phosphatase
And Gtpase Activating Protein Sptp Bound To Rac1
pdb|1G4W|R Chain R, Crystal Structure Of The Salmonella Tyrosine Phosphatase
And Gtpase Activating Protein Sptp
Length = 383
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 315 GEHR-MISHYHFTTWPD-SGVPSSPNT--LVSFVLSFRTHISPA-----QHPIVVHCSAG 365
GE R I H WPD +PS+ L V + + +P +H ++HC G
Sbjct: 265 GEKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGG 324
Query: 366 VGRTGTFIA 374
VGRTGT A
Sbjct: 325 VGRTGTMAA 333
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 344 VLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDILRIVHGLRRQ 403
V +F + P++VH +AGV R+G I L ++ + N E + L + H +R
Sbjct: 97 VTAFLSKCDQRNEPVLVHSAAGVNRSGAMI-LAYLMSK--NKESLPMLYFLYVYHSMRDL 153
Query: 404 RVLMVQS 410
R V++
Sbjct: 154 RGAFVEN 160
>pdb|1U26|A Chain A, Crystal Structure Of Selenomonas Ruminantium Phytase
Complexed With Persulfated Phytate
pdb|1U26|B Chain B, Crystal Structure Of Selenomonas Ruminantium Phytase
Complexed With Persulfated Phytate
Length = 337
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 336 SPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQ 380
+P + F+ +RT P + HC AGVGRT F+ + +L+
Sbjct: 217 TPENIDRFLAFYRT--LPQDAWLHFHCEAGVGRTTAFMVMTDMLK 259
>pdb|2PSZ|A Chain A, Structure Of The Ptp-like Phytase Expressed By Selenomonas
Ruminantium At Low Ionic Strength
pdb|2PSZ|B Chain B, Structure Of The Ptp-like Phytase Expressed By Selenomonas
Ruminantium At Low Ionic Strength
pdb|3D1H|A Chain A, Structure Of The Ptp-Like Phytase Expressed By Selenomonas
Ruminantium At An Ionic Strength Of 500 Mm
pdb|3D1H|B Chain B, Structure Of The Ptp-Like Phytase Expressed By Selenomonas
Ruminantium At An Ionic Strength Of 500 Mm
pdb|3D1O|A Chain A, Structure Of The Ptp-Like Phytase Expressed By Selenomonas
Ruminantium At An Ionic Strength Of 300 Mm
pdb|3D1O|B Chain B, Structure Of The Ptp-Like Phytase Expressed By Selenomonas
Ruminantium At An Ionic Strength Of 300 Mm
pdb|3D1Q|A Chain A, Structure Of The Ptp-Like Phytase Expressed By Selenomonas
Ruminantium At An Ionic Strength Of 400 Mm
pdb|3D1Q|B Chain B, Structure Of The Ptp-Like Phytase Expressed By Selenomonas
Ruminantium At An Ionic Strength Of 400 Mm
Length = 340
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 336 SPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQ 380
+P + F+ +RT P + HC AGVGRT F+ + +L+
Sbjct: 222 TPENIDRFLAFYRT--LPQDAWLHFHCEAGVGRTTAFMVMTDMLK 264
>pdb|2B4P|A Chain A, Structure Of The D223n Mutant Of Selenomonas Ruminantium
Ptp-Like Phytase
pdb|2B4P|B Chain B, Structure Of The D223n Mutant Of Selenomonas Ruminantium
Ptp-Like Phytase
Length = 334
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 336 SPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQ 380
+P + F+ +RT P + HC AGVGRT F+ + +L+
Sbjct: 216 TPENIDRFLAFYRT--LPQDAWLHFHCEAGVGRTTAFMVMTDMLK 258
>pdb|3F41|A Chain A, Structure Of The Tandemly Repeated Protein Tyrosine
Phosphatase Like Phytase From Mitsuokella Multacida
pdb|3F41|B Chain B, Structure Of The Tandemly Repeated Protein Tyrosine
Phosphatase Like Phytase From Mitsuokella Multacida
Length = 629
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 322 HYHFTTWPDSGVPSSPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQ 380
HY+ D PS+ N + ++F T PA + HC AG GRT ++A+ +++
Sbjct: 500 HYYRIAATDHIWPSAAN--IDEFINF-TRTMPANAWLHFHCQAGAGRTTAYMAMYDMMK 555
>pdb|3PQK|A Chain A, Crystal Structure Of The Transcriptional Repressor Bigr
From Xylella Fastidiosa
pdb|3PQK|B Chain B, Crystal Structure Of The Transcriptional Repressor Bigr
From Xylella Fastidiosa
pdb|3PQK|C Chain C, Crystal Structure Of The Transcriptional Repressor Bigr
From Xylella Fastidiosa
pdb|3PQK|D Chain D, Crystal Structure Of The Transcriptional Repressor Bigr
From Xylella Fastidiosa
pdb|3PQK|E Chain E, Crystal Structure Of The Transcriptional Repressor Bigr
From Xylella Fastidiosa
pdb|3PQK|F Chain F, Crystal Structure Of The Transcriptional Repressor Bigr
From Xylella Fastidiosa
Length = 102
Score = 30.4 bits (67), Expect = 2.2, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 130 VTRRDTCHPSQDVT--LHNCSHPIPVTLFCTMTLDPDWIAVEFEDLKSVGRGQPTTAAEL 187
+TR D + +V L SHP+ + L CT+ ++ ++ E E + +G GQPT + +L
Sbjct: 1 MTREDMEKRANEVANLLKTLSHPVRLXLVCTL-VEGEFSVGELE--QQIGIGQPTLSQQL 57
>pdb|3PQJ|A Chain A, Crystal Structure Of The Transcriptional Repressor Bigr
From Xylella Fastidiosa
pdb|3PQJ|B Chain B, Crystal Structure Of The Transcriptional Repressor Bigr
From Xylella Fastidiosa
pdb|3PQJ|C Chain C, Crystal Structure Of The Transcriptional Repressor Bigr
From Xylella Fastidiosa
pdb|3PQJ|D Chain D, Crystal Structure Of The Transcriptional Repressor Bigr
From Xylella Fastidiosa
Length = 102
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 130 VTRRDTCHPSQDVT--LHNCSHPIPVTLFCTMTLDPDWIAVEFEDLKSVGRGQPTTAAEL 187
+TR D + +V L SHP+ + L CT+ ++ ++ E E + +G GQPT + +L
Sbjct: 1 MTREDMEKRANEVANLLKTLSHPVRLMLVCTL-VEGEFSVGELE--QQIGIGQPTLSQQL 57
>pdb|2B4O|A Chain A, Structure Of The R258k Mutant Of Selenomonas Ruminantium
Ptp-Like Phytase
pdb|2B4O|B Chain B, Structure Of The R258k Mutant Of Selenomonas Ruminantium
Ptp-Like Phytase
Length = 334
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 336 SPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQ 380
+P + F+ +RT P + HC AGVG+T F+ + +L+
Sbjct: 216 TPENIDRFLAFYRT--LPQDAWLHFHCEAGVGKTTAFMVMTDMLK 258
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 327 TWP-DSGVPSSPNTLVSFVLSFRTHIS-----PAQHP--IVVHCSAGVGRTGTFIALDTV 378
+WP D G P + L S++ T ++ P+ P I VHC AG+GR +AL V
Sbjct: 73 SWPFDDGAPPTRAVLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLGRAPILVALALV 132
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 334 PSSPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDI 393
P +P+ + FV + + VHC+ G GRTGT +A V +R + A
Sbjct: 68 PPAPDQIDRFV-QIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDA----- 121
Query: 394 LRIVHGLRRQRVLMVQSLAQYAFIYECVQ 422
+ +RR R +++ Q +++ Q
Sbjct: 122 ---IAEIRRLRPGSIETYEQEKAVFQFYQ 147
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 334 PSSPNTLVSFVLSFRTHISPAQHPIVVHCSAGVGRTGTFIALDTVLQRLYNSEGAGSVDI 393
P +P+ + FV + + VHC+ G GRTGT +A V +R + A
Sbjct: 69 PPAPDQIDRFV-QIVDEANARGEAVGVHCALGFGRTGTXLACYLVKERGLAAGDA----- 122
Query: 394 LRIVHGLRRQRVLMVQSLAQYAFIYECVQ 422
+ +RR R +++ Q +++ Q
Sbjct: 123 ---IAEIRRLRPGSIETYEQEKAVFQFYQ 148
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,971,737
Number of Sequences: 62578
Number of extensions: 581937
Number of successful extensions: 1485
Number of sequences better than 100.0: 137
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1011
Number of HSP's gapped (non-prelim): 154
length of query: 451
length of database: 14,973,337
effective HSP length: 102
effective length of query: 349
effective length of database: 8,590,381
effective search space: 2998042969
effective search space used: 2998042969
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)