BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15335
(552 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UVI|A Chain A, Trna-Guanine Transglycosylase C158s C281s W326e E339q
Mutant
Length = 388
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 205 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDE------MFRVLDFSVPMLPDDKP 258
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFDS LP G AFT+
Sbjct: 259 HYLMGVGKPDDIVGAVERGIDMFDSVLPTRSGRNGQAFTW 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ ++L +L++
Sbjct: 304 IRNARFSEDLKPLDSECHCAVCQKESRAYIHHLIRAGQILGAMLMT 349
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ ++L +L++
Sbjct: 304 IRNARFSEDLKPLDSECHCAVCQKESRAYIHHLIRAGQILGAMLMT 349
>pdb|2ASH|A Chain A, Crystal Structure Of Queuine Trna-Ribosyltransferase (Ec
2.4.2.29) (Trna-Guanine (Tm1561) From Thermotoga
Maritima At 1.90 A Resolution
pdb|2ASH|B Chain B, Crystal Structure Of Queuine Trna-Ribosyltransferase (Ec
2.4.2.29) (Trna-Guanine (Tm1561) From Thermotoga
Maritima At 1.90 A Resolution
pdb|2ASH|C Chain C, Crystal Structure Of Queuine Trna-Ribosyltransferase (Ec
2.4.2.29) (Trna-Guanine (Tm1561) From Thermotoga
Maritima At 1.90 A Resolution
pdb|2ASH|D Chain D, Crystal Structure Of Queuine Trna-Ribosyltransferase (Ec
2.4.2.29) (Trna-Guanine (Tm1561) From Thermotoga
Maritima At 1.90 A Resolution
Length = 381
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 2 NRKALK--DTCVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVV 59
++KA K + + +QGG+ LRR A + G+ I GL E + L
Sbjct: 180 SKKAFKTENQALFGIVQGGIYPDLRRESALQLTSIGFDGYAIGGLSIGEERSLTL----- 234
Query: 60 NAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ E TV +LP DK R G SP I++ V RG+DMFDS P +A G A T+
Sbjct: 235 -EMTEVTVEFLPEDKPRYFMGGGSPELILELVDRGVDMFDSVFPTRIARHGTALTW 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 353 PILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLSICNSSNGVSI 397
P+ C C TC++ TR+YIHHL + E+L +LL+I N + +S+
Sbjct: 306 PVDERCGCYTCKNFTRSYIHHLFDRGEVLGQILLTIHNINFMISL 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 518 PILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
P+ C C TC++ TR+YIHHL + E+L +LL+
Sbjct: 306 PVDERCGCYTCKNFTRSYIHHLFDRGEVLGQILLT 340
>pdb|4HQV|A Chain A, Trna-Guanine Transglycosylase Y106f, C158v, V233g Mutant
In Complex With Queuine
Length = 385
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 202 QGSVFENLRQQSADALAEIGFDGYAVGGLAGGEGQDE------MFRVLDFSVPMLPDDKP 255
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 256 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 301 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 346
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 301 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 346
>pdb|4GCX|A Chain A, Trna-Guanine Transglycosylase Y106f, C158v, V233g Mutant
In Complex With Preq1
pdb|4H6E|A Chain A, Trna-Guanine Transglycosylase Y106f, C158v, V233g Mutant
Apo Structure
Length = 386
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAGGEGQDE------MFRVLDFSVPMLPDDKP 256
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 257 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 296
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
>pdb|3UNT|A Chain A, Trna-Guanine Transglycosylase E339q Mutant
Length = 388
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 205 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDE------MFRVLDFSVPMLPDDKP 258
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 259 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ ++L +L++
Sbjct: 304 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGQILGAMLMT 349
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ ++L +L++
Sbjct: 304 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGQILGAMLMT 349
>pdb|4HSH|A Chain A, Trna-Guanine Transglycosylase Y106f, V233g Mutant In
Complex With Queuine
Length = 385
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 202 QGSVFENLRQQSADALAEIGFDGYAVGGLAGGEGQDE------MFRVLDFSVPMLPDDKP 255
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 256 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 301 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 301 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 346
>pdb|1Y5V|A Chain A, Trna-guanine Transglycosylase (tgt) In Complex With
6-amino-4-(2-
Phenylethyl)-1,7-dihydro-8h-imidazo[4,
5-g]quinazolin-8-one
pdb|1Y5W|A Chain A, Trna-Guanine Transglycosylase (Tgt) In Complex With
6-Amino-4-[2-(4-
Methylphenyl)ethyl]-1,7-Dihydro-8h-Imidazo[4,
5-G]quinazolin-8-One
pdb|1Y5X|A Chain A, Trna-Guanine Transglycosylase (Tgt) In Complex With
6-Amino-4-[2-(4-
Methoxyphenyl)ethyl]-1,7-Dihydro-8h-Imidazo[4,
5-G]quinazolin-8-One
pdb|1Y5X|D Chain D, Trna-Guanine Transglycosylase (Tgt) In Complex With
6-Amino-4-[2-(4-
Methoxyphenyl)ethyl]-1,7-Dihydro-8h-Imidazo[4,
5-G]quinazolin-8-One
pdb|2QZR|A Chain A, Trna-Guanine Transglycosylase(Tgt) In Complex With
6-Amino-2-[(1-
Naphthylmethyl)amino]-3,7-Dihydro-8h-Imidazo[4,
5-G]quinazolin-8-One
Length = 385
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 202 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDE------MFRVLDFSVPMLPDDKP 255
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 256 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 301 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 301 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 346
>pdb|3BL3|A Chain A, Trna Guanine Transglycosylase V233g Mutant Apo Structure
pdb|3BLD|A Chain A, Trna Guanine Transglycosylase V233g Mutant Preq1 Complex
Structure
Length = 386
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAGGEGQDE------MFRVLDFSVPMLPDDKP 256
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 257 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 296
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
>pdb|4GD0|A Chain A, Trna-Guanine Transglycosylase Y106f, C158v Mutant
pdb|4H7Z|A Chain A, Trna-Guanine Transglycosylase Y106f, C158v Mutant In
Complex With Guanine
pdb|4HVX|A Chain A, Trna-Guanine Transglycosylase Y106f, C158v Mutant In
Complex With Queuine
Length = 386
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDE------MFRVLDFSVPMLPDDKP 256
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 257 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 296
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
>pdb|1ENU|A Chain A, A New Target For Shigellosis: Rational Design And
Crystallographic Studies Of Inhibitors Of Trna-Guanine
Transglycosylase
pdb|1F3E|A Chain A, A New Target For Shigellosis: Rational Design And
Crystallographic Studies Of Inhibitors Of Trna-Guanine
Transglycosylase
pdb|1K4G|A Chain A, Crystal Structure Of Trna-guanine Transglycosylase (tgt)
Complexed With
2,
6-diamino-8-(1h-imidazol-2-ylsulfanylmethyl)-3h-
quinazoline-4- One
pdb|1K4H|A Chain A, Crystal Structure Of Trna-Guanine Transglycosylase (Tgt)
Complexed With
2,6-Diamino-8-Propylsulfanylmethyl-3h-Quinazoline-4-One
pdb|1N2V|A Chain A, Crystal Structure Of Tgt In Complex With
2-Butyl-5,6-Dihydro-1h-
Imidazo[4,5-D]pyridazine-4,7-Dione
pdb|1Q2R|A Chain A, Chemical Trapping And Crystal Structure Of A Catalytic
Trna Guanine Transglycosylase Covalent Intermediate
pdb|1Q2R|B Chain B, Chemical Trapping And Crystal Structure Of A Catalytic
Trna Guanine Transglycosylase Covalent Intermediate
pdb|1Q2R|C Chain C, Chemical Trapping And Crystal Structure Of A Catalytic
Trna Guanine Transglycosylase Covalent Intermediate
pdb|1Q2R|D Chain D, Chemical Trapping And Crystal Structure Of A Catalytic
Trna Guanine Transglycosylase Covalent Intermediate
pdb|1Q2S|A Chain A, Chemical Trapping And Crystal Structure Of A Catalytic
Trna Guanine Transglycosylase Covalent Intermediate
pdb|1Q2S|B Chain B, Chemical Trapping And Crystal Structure Of A Catalytic
Trna Guanine Transglycosylase Covalent Intermediate
pdb|1Q2S|C Chain C, Chemical Trapping And Crystal Structure Of A Catalytic
Trna Guanine Transglycosylase Covalent Intermediate
pdb|1Q2S|D Chain D, Chemical Trapping And Crystal Structure Of A Catalytic
Trna Guanine Transglycosylase Covalent Intermediate
pdb|1P0B|A Chain A, Crystal Structure Of Trna-Guanine Transglycosylase (Tgt)
From Zymomonas Mobilis Complexed With Archaeosine
Precursor, Preq0
pdb|1P0D|A Chain A, Crystal Structure Of Zymomonas Mobilis Trna-Guanine
Transglycosylase (Tgt) Crystallised At Ph 5.5
pdb|1P0E|A Chain A, Crystal Structure Of Zymomonas Mobilis Trna-Guanine
Transglycosylase (Tgt) Cocrystallised With Preq1 At Ph
5.5
pdb|1Q4W|A Chain A, Crystal Structure Of Tgt In Complex With
2,6-Diamino-3h-Quinazolin-4- One
pdb|1Q63|A Chain A, Crystal Structure Of Tgt In Complex With
2,6-Diamino-8-(1h-Imidazol-2-
Ylsulfanylmethyl)-3h-Quinazoline-4-One Crystallized At
Ph 5.5
pdb|1Q65|A Chain A, Crystal Structure Of Tgt In Complex With 2,6-Diamino-8-(2-
Dimethylaminoethylsulfanylmethyl)-3h-Quinazolin-4-One
Crystallized At Ph 5.5
pdb|1Q66|A Chain A, Crystal Structure Of Tgt In Complex With
2-Amino-6-Aminomethyl-8-
Phenylsulfanylmethyl-3h-Quinazolin-4-One Crystallized At
Ph 5.5
pdb|1R5Y|A Chain A, Crystal Structure Of Tgt In Complex With
2,6-diamino-3h-quinazolin-4- One Crystallized At Ph 5.5
pdb|1S38|A Chain A, Crystal Structure Of Tgt In Complex With
2-amino-8-methylquinazolin- 4(3h)-one
pdb|1S39|A Chain A, Crystal Structure Of Tgt In Complex With
2-Aminoquinazolin-4(3h)-One
pdb|2BBF|A Chain A, Crystal Structure Of Trna-Guanine Transglycosylase (Tgt)
From Zymomonas Mobilis In Complex With
6-Amino-3,7-Dihydro-Imidazo[4,5- G]quinazolin-8-One
pdb|2QII|A Chain A, Crystal Structure Of Trna-Guanine Transglycosylase (Tgt)
From Zymomonas Mobilis Complexed With Archaeosine
Precursor, Preq0
pdb|1PUD|A Chain A, Trna-Guanine Transglycosylase
pdb|2PWU|A Chain A, Trna Guanine Transglycosylase In Complex With Guanine
pdb|2Z7K|A Chain A, Trna-Guanine Transglycosylase (Tgt) In Complex With
2-Amino-Lin- Benzoguanine
pdb|3C2N|A Chain A, Trna-Guanine Transglycosylase (Tgt) In Complex With
6-Amino-2-(2-
Morpholin-4-Yl-Ethylamino)-1,7-Dihydro-Imidazo[4,
5-G]quinazolin-8-One
pdb|3C2Y|A Chain A, Trna-Guanine Transglycosylase (Tgt) In Complex With
6-Amino-2-Methyl-
1,7-Dihydro-Imidazo[4,5-G]quinazolin-8-One
pdb|3C2Z|A Chain A, Trna-Guanine Transglycosylase (Tgt) In Complex With
6-Amino-2-
[(Thiophen-2-Ylmethyl)-Amino]-1,7-Dihydro-Imidazo[4,
5-G]quinazolin-8- One
pdb|3EOS|A Chain A, Trna-Guanine Transglycosylase In Complex With
6-Amino-4-{2-
[(Cyclohexylmethyl)amino]ethyl}-2-(Methylamino)-1,
7-Dihydro-8h- Imidazo[4,5-G]quinazolin-8-One
pdb|3EOU|A Chain A, Trna-Guanine Transglycosylase In Complex With
6-Amino-4-(2-
Hydroxyethyl)-2-(Methylamino)-3,7-Dihydro-8h-Imidazo[4,
5- G]quinazolin-8-One
pdb|3GC4|A Chain A, Trna-Guanine Transglycosylase In Complex With Inhibitor
pdb|3GC5|A Chain A, Trna-Guanine Transglycosylase In Complex With
6-Amino-4-(2-
Aminoethyl)-2-(Methylamino)-1,7-Dihydro-8h-Imidazo[4,
5-G]quinazolin- 8-One
pdb|3GE7|A Chain A, Trna-Guanine Transglycosylase In Complex With
6-Amino-4-{2-
[(Cyclopentylmethyl)amino]ethyl}-2-(Methylamino)-1,
7-Dihydro-8h- Imidazo[4,5-G]quinazolin-8-One
pdb|3GEV|A Chain A, Trna-Guanine Transglycosylase In Complex With
2-[(2-Thienylmethyl)
Amino]-1,7-Dihydro-8h-Imidazo[4,5-G]quinazolin-8-One
pdb|3V0Y|A Chain A, Trna-Guanine Transglycosylase In Complex With
Lin-Benzohypoxanthine Inhibitor
pdb|3RR4|A Chain A, Trna-Guanine Transglycosylase In Complex With
N-Methyl-Lin- Benzoguanine Inhibitor
pdb|3S1G|A Chain A, Trna-Guanine Transglycosylase In Complex With
Lin-Benzohypoxanthine Inhibitor
pdb|3SM0|A Chain A, Trna-Guanine Transglycosylase In Complex With
Lin-Benzohypoxanthine Inhibitor
pdb|3TLL|A Chain A, Trna-Guanine Transglycosylase In Complex With
N-Ethyl-Lin-Benzoguanine Inhibitor
Length = 386
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDE------MFRVLDFSVPMLPDDKP 256
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 257 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 296
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
>pdb|1WKD|A Chain A, Trna-Guanine Transglycosylase
Length = 386
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDE------MFRVLDFSVPMLPDDKP 256
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 257 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 296
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
>pdb|1WKE|A Chain A, Trna-Guanine Transglycosylase
Length = 386
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDE------MFRVLDFSVPMLPDDKP 256
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 257 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 296
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
>pdb|1EFZ|A Chain A, Mutagenesis And Crystallographic Studies Of Zymomonas
Mobilis Trna- Guanine Transglycosylase To Elucidate The
Role Of Serine 103 For Enzymatic Activity
Length = 386
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDE------MFRVLDFSVPMLPDDKP 256
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 257 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 296
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
>pdb|1WKF|A Chain A, Trna-Guanine Transglycosylase
Length = 386
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDE------MFRVLDFSVPMLPDDKP 256
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 257 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 296
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
>pdb|1OZM|A Chain A, Y106f Mutant Of Z. Mobilis Tgt
pdb|1OZQ|A Chain A, Crystal Structure Of The Mutated Trna-Guanine
Transglycosylase (Tgt) Y106f Complexed With Preq1
Length = 386
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDE------MFRVLDFSVPMLPDDKP 256
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 257 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 296
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
>pdb|3HFY|A Chain A, Mutant Of Trna-Guanine Transglycosylase (K52m)
Length = 386
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDE------MFRVLDFSVPMLPDDKP 256
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 257 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 296
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
>pdb|2NQZ|A Chain A, Trna-Guanine Transglycosylase (Tgt) Mutant In Complex With
7-Deaza-7- Aminomethyl-Guanine
Length = 385
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 202 QGSVFENLRQQSADALAEIGFDGYAVGGLSGGEGQDE------MFRVLDFSVPMLPDDKP 255
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 256 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 301 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 346
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 301 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 346
>pdb|2NSO|A Chain A, Trna-Gunanine-Transglycosylase (Tgt) Mutant Y106f, C158v,
A232s, V233g- Apo-Structure
pdb|3BLL|A Chain A, Tgt Mutant In Complex With Boc-Preq1
pdb|3BLO|A Chain A, Tgt Mutant In Complex With Queuine
Length = 386
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 203 QGSVFENLRQQSADALAEIGFDGYAVGGLSGGEGQDE------MFRVLDFSVPMLPDDKP 256
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 257 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 296
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
>pdb|2OKO|A Chain A, Z. Mobilis Trna Guanine Transglycosylase E235q Mutant
Apo-Structure At Ph 5.5
Length = 385
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL +G E + VL+ +VP LP+DK
Sbjct: 202 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGQGQDE------MFRVLDFSVPMLPDDKP 255
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 256 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 301 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 301 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 346
>pdb|2POT|A Chain A, Trna Guanine Transglycosylase (Tgt) E235q Mutant In
Complex With Guanine
pdb|2PWV|A Chain A, Trna Guanine Transglycosylase E235q Mutant In Complex With
Preq0
pdb|2Z1V|A Chain A, Trna Guanine Transglycosylase E235q Mutant Apo Structure,
Ph 8.5
pdb|2Z1W|A Chain A, Trna Guanine Transglycosylase Tgt E235q Mutant In Complex
With Bdi (2-
Butyl-5,6-Dihydro-1h-Imidazo[4,5-D]pyridazine-4,7-Dione)
pdb|2Z1X|A Chain A, Trna Guanine Transglycosylase E235q Mutant In Complex With
Preq1
Length = 386
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL +G E + VL+ +VP LP+DK
Sbjct: 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGQGQDE------MFRVLDFSVPMLPDDKP 256
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMFD LP G AFT+
Sbjct: 257 HYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTW 296
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 302 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 347
>pdb|1PXG|A Chain A, Crystal Structure Of The Mutated Trna-Guanine
Transglycosylase (Tgt) D280e Complexed With Preq1
Length = 382
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKL 75
QG + +LR+ A+ A G+ + GL EG E + VL+ +VP LP+DK
Sbjct: 202 QGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDE------MFRVLDFSVPMLPDDKP 255
Query: 76 RIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLADRGCAFTF 115
+ G P +IV V+RGIDMF+ LP G AFT+
Sbjct: 256 HYLMGVGKPDDIVGAVERGIDMFECVLPTRSGRNGQAFTW 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 342 LQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 387
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 301 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 507 LQHPRYVADFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLS 552
+++ R+ D P+ +EC C CQ +RAYIHHL+ E+L +L++
Sbjct: 301 IRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMT 346
>pdb|2YKG|A Chain A, Structural Insights Into Rna Recognition By Rig-I
Length = 696
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
Query: 226 SEISD----SLYKPRQYEMWLQHPSINGKNGV 253
SE+SD S +KPR Y++ L P++ GKN +
Sbjct: 1 SEVSDTNLYSPFKPRNYQLELALPAMKGKNTI 32
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 11/56 (19%)
Query: 491 SEISD----SLYKPRQYEMWLQHPRYVADFTPILAECEC-------LTCQHHTRAY 535
SE+SD S +KPR Y++ L P T I A C L C+HH + +
Sbjct: 1 SEVSDTNLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF 56
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.309 0.126 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,328,249
Number of Sequences: 62578
Number of extensions: 749503
Number of successful extensions: 1476
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1397
Number of HSP's gapped (non-prelim): 93
length of query: 552
length of database: 14,973,337
effective HSP length: 104
effective length of query: 448
effective length of database: 8,465,225
effective search space: 3792420800
effective search space used: 3792420800
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 54 (25.4 bits)