Query psy15335
Match_columns 552
No_of_seqs 394 out of 2030
Neff 4.1
Searched_HMMs 29240
Date Fri Aug 16 18:19:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15335.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15335hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ash_A Queuine tRNA-ribosyltra 100.0 9.4E-48 3.2E-52 400.0 3.2 198 196-402 141-355 (381)
2 3bld_A Queuine tRNA-ribosyltra 100.0 1.6E-47 5.3E-52 399.1 3.5 199 196-402 143-362 (386)
3 1iq8_A Archaeosine tRNA-guanin 100.0 1.6E-38 5.4E-43 345.7 3.8 187 196-402 117-320 (582)
4 2ash_A Queuine tRNA-ribosyltra 100.0 1.1E-30 3.7E-35 272.1 12.3 108 8-121 188-295 (381)
5 3bld_A Queuine tRNA-ribosyltra 100.0 9.4E-31 3.2E-35 273.0 9.6 106 9-120 196-301 (386)
6 1iq8_A Archaeosine tRNA-guanin 99.9 4.7E-27 1.6E-31 255.8 8.0 112 8-122 161-272 (582)
7 1nvm_A HOA, 4-hydroxy-2-oxoval 91.8 0.53 1.8E-05 47.9 9.1 78 19-98 27-110 (345)
8 1nvm_A HOA, 4-hydroxy-2-oxoval 88.5 1.2 4.2E-05 45.2 8.5 79 17-102 144-227 (345)
9 2ftp_A Hydroxymethylglutaryl-C 88.2 1.4 4.7E-05 44.0 8.4 78 18-102 155-236 (302)
10 1ydo_A HMG-COA lyase; TIM-barr 87.6 1.2 4E-05 45.0 7.6 79 17-102 152-234 (307)
11 3ble_A Citramalate synthase fr 87.4 1.6 5.3E-05 44.5 8.5 77 19-102 166-246 (337)
12 3s5o_A 4-hydroxy-2-oxoglutarat 86.4 1.2 4.3E-05 44.6 7.0 87 16-106 29-121 (307)
13 1xky_A Dihydrodipicolinate syn 83.7 1.4 4.8E-05 44.1 5.9 86 16-105 27-118 (301)
14 3b4u_A Dihydrodipicolinate syn 83.2 1.7 5.8E-05 43.3 6.3 85 16-104 18-108 (294)
15 3cpr_A Dihydrodipicolinate syn 83.0 1.6 5.3E-05 43.8 5.9 85 16-104 31-121 (304)
16 2nuw_A 2-keto-3-deoxygluconate 82.9 2.4 8.2E-05 42.0 7.2 83 16-105 14-102 (288)
17 2wkj_A N-acetylneuraminate lya 82.8 1.4 4.8E-05 44.1 5.5 85 16-104 26-116 (303)
18 1f6k_A N-acetylneuraminate lya 82.1 1.5 5E-05 43.6 5.3 85 16-104 18-109 (293)
19 3a5f_A Dihydrodipicolinate syn 81.9 1.7 5.6E-05 43.2 5.6 85 16-105 17-107 (291)
20 3ewb_X 2-isopropylmalate synth 81.8 3.5 0.00012 41.2 7.9 79 17-102 145-230 (293)
21 2ehh_A DHDPS, dihydrodipicolin 81.3 1.6 5.4E-05 43.4 5.2 85 16-104 15-105 (294)
22 1rqb_A Transcarboxylase 5S sub 81.1 2.2 7.6E-05 46.6 6.7 79 19-103 172-254 (539)
23 2cw6_A Hydroxymethylglutaryl-C 81.0 2.8 9.6E-05 41.6 6.9 79 17-102 151-233 (298)
24 2yxg_A DHDPS, dihydrodipicolin 80.6 1.5 5.2E-05 43.4 4.8 86 16-105 15-106 (289)
25 1w3i_A EDA, 2-keto-3-deoxy glu 80.3 2.5 8.7E-05 42.0 6.3 83 16-105 14-102 (293)
26 2rfg_A Dihydrodipicolinate syn 79.6 1.6 5.5E-05 43.6 4.6 86 16-105 15-106 (297)
27 1o5k_A DHDPS, dihydrodipicolin 79.3 1.7 5.8E-05 43.6 4.7 85 16-104 27-117 (306)
28 3flu_A DHDPS, dihydrodipicolin 79.3 2.2 7.6E-05 42.5 5.5 85 16-104 22-112 (297)
29 1ydn_A Hydroxymethylglutaryl-C 79.2 3.3 0.00011 40.8 6.7 77 18-101 151-231 (295)
30 2vc6_A MOSA, dihydrodipicolina 78.8 1.5 5.1E-05 43.6 4.1 85 16-104 15-105 (292)
31 2nx9_A Oxaloacetate decarboxyl 78.5 3.7 0.00013 44.0 7.2 76 20-103 156-235 (464)
32 2r8w_A AGR_C_1641P; APC7498, d 78.3 1.7 5.8E-05 44.2 4.4 85 16-104 49-139 (332)
33 2v9d_A YAGE; dihydrodipicolini 78.0 2.4 8.1E-05 43.4 5.4 85 16-104 46-136 (343)
34 2r91_A 2-keto-3-deoxy-(6-phosp 77.9 2.8 9.6E-05 41.5 5.7 83 16-105 13-101 (286)
35 2ojp_A DHDPS, dihydrodipicolin 77.2 1.7 5.8E-05 43.2 4.0 85 16-104 16-106 (292)
36 3si9_A DHDPS, dihydrodipicolin 77.0 2.5 8.6E-05 42.7 5.2 86 16-105 37-128 (315)
37 3na8_A Putative dihydrodipicol 76.1 2.7 9.1E-05 42.4 5.1 85 16-104 39-129 (315)
38 4dpp_A DHDPS 2, dihydrodipicol 76.1 3.2 0.00011 43.1 5.8 85 16-104 74-164 (360)
39 3bg3_A Pyruvate carboxylase, m 76.0 5.1 0.00017 45.2 7.8 85 19-110 258-346 (718)
40 3tak_A DHDPS, dihydrodipicolin 76.0 2.7 9.2E-05 41.7 5.0 85 16-104 16-106 (291)
41 3qfe_A Putative dihydrodipicol 75.6 2.8 9.6E-05 42.3 5.1 87 16-106 26-118 (318)
42 3eeg_A 2-isopropylmalate synth 75.2 5.9 0.0002 40.2 7.4 81 16-102 145-231 (325)
43 3l21_A DHDPS, dihydrodipicolin 74.4 2.7 9.3E-05 42.1 4.6 85 16-104 30-120 (304)
44 3fkr_A L-2-keto-3-deoxyarabona 74.0 4.1 0.00014 40.9 5.8 86 16-105 23-114 (309)
45 3qze_A DHDPS, dihydrodipicolin 73.7 3.4 0.00011 41.7 5.1 85 16-104 38-128 (314)
46 3dz1_A Dihydrodipicolinate syn 73.6 5.9 0.0002 39.8 6.8 84 16-104 23-112 (313)
47 3m5v_A DHDPS, dihydrodipicolin 73.5 3.1 0.00011 41.5 4.8 86 16-105 22-114 (301)
48 3rmj_A 2-isopropylmalate synth 68.0 10 0.00034 39.3 7.3 83 16-104 151-239 (370)
49 3h5d_A DHDPS, dihydrodipicolin 67.9 6.4 0.00022 39.6 5.6 84 16-103 22-112 (311)
50 1vrd_A Inosine-5'-monophosphat 66.1 8.3 0.00028 40.6 6.3 66 26-100 240-305 (494)
51 1zfj_A Inosine monophosphate d 66.0 11 0.00039 39.4 7.3 63 28-99 238-300 (491)
52 3e96_A Dihydrodipicolinate syn 65.1 4.4 0.00015 40.8 3.8 85 16-104 27-116 (316)
53 3d0c_A Dihydrodipicolinate syn 63.0 6.8 0.00023 39.4 4.7 85 16-104 27-116 (314)
54 4avf_A Inosine-5'-monophosphat 62.5 18 0.00061 38.6 8.1 81 8-99 216-296 (490)
55 1eep_A Inosine 5'-monophosphat 61.9 15 0.00052 37.7 7.2 78 12-100 144-221 (404)
56 3eb2_A Putative dihydrodipicol 60.0 2.4 8.2E-05 42.3 0.8 86 16-105 19-110 (300)
57 3hbl_A Pyruvate carboxylase; T 59.6 13 0.00044 43.9 6.9 80 19-106 689-772 (1150)
58 2pcq_A Putative dihydrodipicol 59.5 8.7 0.0003 37.9 4.7 80 16-104 13-98 (283)
59 4fxs_A Inosine-5'-monophosphat 59.4 15 0.00053 39.2 6.9 81 8-99 218-298 (496)
60 3daq_A DHDPS, dihydrodipicolin 58.9 12 0.00042 37.0 5.7 83 18-104 19-107 (292)
61 2qf7_A Pyruvate carboxylase pr 58.9 12 0.00043 44.1 6.6 82 19-108 706-791 (1165)
62 3usb_A Inosine-5'-monophosphat 58.7 20 0.00068 38.5 7.7 81 8-99 243-323 (511)
63 2ekc_A AQ_1548, tryptophan syn 57.8 29 0.001 33.7 8.1 86 8-96 16-124 (262)
64 2ztj_A Homocitrate synthase; ( 56.5 16 0.00056 37.6 6.4 78 19-103 142-223 (382)
65 1jub_A Dihydroorotate dehydrog 56.0 54 0.0018 32.0 9.7 90 16-106 166-276 (311)
66 1jcn_A Inosine monophosphate d 55.7 21 0.00072 37.8 7.2 66 27-101 259-324 (514)
67 3dxi_A Putative aldolase; TIM 55.5 17 0.00057 37.0 6.1 61 33-102 154-219 (320)
68 2hmc_A AGR_L_411P, dihydrodipi 55.2 12 0.0004 38.4 5.0 83 16-105 41-129 (344)
69 1jub_A Dihydroorotate dehydrog 52.9 64 0.0022 31.5 9.7 87 12-100 96-191 (311)
70 2gjl_A Hypothetical protein PA 52.1 32 0.0011 34.1 7.5 78 28-109 131-209 (328)
71 3nav_A Tryptophan synthase alp 51.9 35 0.0012 33.9 7.6 73 20-98 161-234 (271)
72 1wa3_A 2-keto-3-deoxy-6-phosph 50.6 10 0.00035 34.7 3.3 85 6-104 7-91 (205)
73 3b0p_A TRNA-dihydrouridine syn 50.1 53 0.0018 33.3 8.9 86 11-99 59-162 (350)
74 3r2g_A Inosine 5'-monophosphat 49.4 19 0.00064 37.4 5.4 66 25-100 102-168 (361)
75 4e38_A Keto-hydroxyglutarate-a 49.2 16 0.00054 35.8 4.6 56 25-98 96-151 (232)
76 1thf_D HISF protein; thermophI 47.6 63 0.0022 30.2 8.4 71 26-103 155-226 (253)
77 1ep3_A Dihydroorotate dehydrog 46.1 45 0.0015 32.2 7.3 76 26-103 180-272 (311)
78 4hb7_A Dihydropteroate synthas 45.8 1.5E+02 0.0051 29.8 11.1 111 3-115 1-130 (270)
79 1rd5_A Tryptophan synthase alp 45.5 79 0.0027 30.1 8.8 84 9-96 18-120 (262)
80 2z6i_A Trans-2-enoyl-ACP reduc 45.0 51 0.0017 32.9 7.7 75 28-108 123-198 (332)
81 1f76_A Dihydroorotate dehydrog 44.4 62 0.0021 32.1 8.1 91 15-105 218-322 (336)
82 2c6q_A GMP reductase 2; TIM ba 43.9 34 0.0012 34.9 6.3 79 12-101 109-189 (351)
83 1ep3_A Dihydroorotate dehydrog 43.6 60 0.0021 31.3 7.8 90 10-101 99-196 (311)
84 3qja_A IGPS, indole-3-glycerol 43.3 39 0.0013 33.4 6.4 61 33-100 180-241 (272)
85 3bo9_A Putative nitroalkan dio 43.0 52 0.0018 32.9 7.4 76 28-109 137-213 (326)
86 1h5y_A HISF; histidine biosynt 42.6 93 0.0032 28.4 8.6 82 14-102 20-107 (253)
87 3hgj_A Chromate reductase; TIM 41.9 33 0.0011 34.7 5.8 76 25-101 155-259 (349)
88 3bw2_A 2-nitropropane dioxygen 41.8 40 0.0014 34.1 6.4 79 28-109 158-245 (369)
89 3sgz_A Hydroxyacid oxidase 2; 41.3 42 0.0014 34.7 6.5 77 26-107 229-307 (352)
90 2nli_A Lactate oxidase; flavoe 40.8 41 0.0014 34.6 6.3 77 26-107 241-319 (368)
91 1h5y_A HISF; histidine biosynt 40.6 85 0.0029 28.7 7.9 70 28-104 160-230 (253)
92 3khj_A Inosine-5-monophosphate 40.0 61 0.0021 33.3 7.5 66 25-100 107-172 (361)
93 3zwt_A Dihydroorotate dehydrog 38.8 54 0.0018 33.8 6.9 91 15-105 227-331 (367)
94 1f76_A Dihydroorotate dehydrog 38.7 97 0.0033 30.7 8.5 90 11-101 135-245 (336)
95 3iix_A Biotin synthetase, puta 38.6 1.1E+02 0.0039 29.8 8.9 71 20-98 85-156 (348)
96 1ka9_F Imidazole glycerol phos 38.4 95 0.0032 28.9 8.0 67 28-101 158-225 (252)
97 1ypf_A GMP reductase; GUAC, pu 37.9 58 0.002 32.7 6.8 75 26-106 161-244 (336)
98 1yxy_A Putative N-acetylmannos 37.9 50 0.0017 30.7 6.0 67 26-99 92-158 (234)
99 2e6f_A Dihydroorotate dehydrog 37.4 49 0.0017 32.4 6.1 88 11-100 95-194 (314)
100 2w6r_A Imidazole glycerol phos 37.3 1E+02 0.0035 29.0 8.1 66 28-100 162-228 (266)
101 3ffs_A Inosine-5-monophosphate 37.2 57 0.002 34.2 6.8 77 10-100 135-211 (400)
102 1qop_A Tryptophan synthase alp 36.5 81 0.0028 30.5 7.4 84 8-96 16-124 (268)
103 3sr7_A Isopentenyl-diphosphate 35.8 65 0.0022 33.3 6.9 86 7-101 143-237 (365)
104 3vnd_A TSA, tryptophan synthas 35.5 81 0.0028 31.2 7.3 42 57-100 192-234 (267)
105 2nzl_A Hydroxyacid oxidase 1; 34.9 70 0.0024 33.2 7.0 78 25-107 263-342 (392)
106 3vkj_A Isopentenyl-diphosphate 34.8 1.1E+02 0.0037 31.6 8.3 81 25-108 201-303 (368)
107 1y0e_A Putative N-acetylmannos 34.4 46 0.0016 30.6 5.0 66 26-99 79-144 (223)
108 1geq_A Tryptophan synthase alp 33.6 1.2E+02 0.0042 28.2 8.0 81 10-97 6-111 (248)
109 3lye_A Oxaloacetate acetyl hyd 33.4 78 0.0027 32.2 6.9 66 27-92 37-110 (307)
110 4fo4_A Inosine 5'-monophosphat 33.0 55 0.0019 33.8 5.8 64 28-100 113-176 (366)
111 1xg4_A Probable methylisocitra 32.8 73 0.0025 32.1 6.5 64 27-92 29-101 (295)
112 1r30_A Biotin synthase; SAM ra 32.6 1.5E+02 0.005 29.6 8.8 74 20-98 100-173 (369)
113 1zlp_A PSR132, petal death pro 32.5 48 0.0016 33.9 5.2 65 27-92 51-123 (318)
114 3vkj_A Isopentenyl-diphosphate 32.3 1.4E+02 0.0047 30.8 8.6 75 17-101 133-218 (368)
115 3o63_A Probable thiamine-phosp 32.2 47 0.0016 32.3 4.9 72 28-101 148-219 (243)
116 3eoo_A Methylisocitrate lyase; 31.7 65 0.0022 32.6 6.0 64 27-92 34-105 (298)
117 3vzx_A Heptaprenylglyceryl pho 31.6 49 0.0017 32.3 4.9 50 26-86 22-71 (228)
118 1mzh_A Deoxyribose-phosphate a 31.6 87 0.003 29.7 6.6 77 16-101 126-204 (225)
119 2f6u_A GGGPS, (S)-3-O-geranylg 31.2 48 0.0016 32.3 4.8 62 14-85 12-74 (234)
120 1yad_A Regulatory protein TENI 31.0 84 0.0029 29.0 6.2 76 28-107 123-198 (221)
121 3usb_A Inosine-5'-monophosphat 30.6 1.1E+02 0.0038 32.7 7.9 72 26-102 309-389 (511)
122 1tqx_A D-ribulose-5-phosphate 29.8 61 0.0021 31.2 5.2 67 36-105 139-205 (227)
123 3tdn_A FLR symmetric alpha-bet 29.2 1.8E+02 0.0061 27.3 8.3 77 15-99 26-106 (247)
124 3ivs_A Homocitrate synthase, m 29.1 51 0.0017 34.9 4.9 77 19-103 177-257 (423)
125 3l5l_A Xenobiotic reductase A; 29.1 43 0.0015 34.1 4.2 76 25-101 161-266 (363)
126 1xi3_A Thiamine phosphate pyro 29.1 51 0.0018 29.8 4.3 72 30-107 123-196 (215)
127 3tsm_A IGPS, indole-3-glycerol 29.0 1.3E+02 0.0045 29.9 7.6 62 32-100 186-248 (272)
128 1p0k_A Isopentenyl-diphosphate 29.0 1.3E+02 0.0044 30.0 7.7 80 26-108 193-287 (349)
129 2hjp_A Phosphonopyruvate hydro 29.0 1E+02 0.0035 30.9 6.9 64 27-92 27-97 (290)
130 1me8_A Inosine-5'-monophosphat 29.0 82 0.0028 33.5 6.5 79 25-105 295-385 (503)
131 3tqv_A Nicotinate-nucleotide p 28.8 93 0.0032 31.4 6.5 63 32-108 215-277 (287)
132 1ydn_A Hydroxymethylglutaryl-C 28.6 1.8E+02 0.0061 28.3 8.4 73 19-97 23-95 (295)
133 1gox_A (S)-2-hydroxy-acid oxid 28.0 74 0.0025 32.5 5.7 77 26-107 237-315 (370)
134 3ih1_A Methylisocitrate lyase; 27.7 75 0.0026 32.2 5.6 64 27-92 41-111 (305)
135 3w01_A Heptaprenylglyceryl pho 27.7 66 0.0023 31.6 5.1 50 24-84 25-74 (235)
136 3b8i_A PA4872 oxaloacetate dec 27.6 94 0.0032 31.2 6.3 64 27-92 33-104 (287)
137 3q58_A N-acetylmannosamine-6-p 27.6 62 0.0021 31.0 4.8 61 27-98 93-153 (229)
138 1gte_A Dihydropyrimidine dehyd 27.6 2.1E+02 0.0072 33.0 10.0 89 11-101 637-735 (1025)
139 1rd5_A Tryptophan synthase alp 27.5 1.3E+02 0.0044 28.7 7.0 48 57-106 187-235 (262)
140 3jr2_A Hexulose-6-phosphate sy 27.4 89 0.0031 29.0 5.8 59 27-96 75-134 (218)
141 2yxb_A Coenzyme B12-dependent 27.2 1.6E+02 0.0053 26.5 7.2 43 56-98 83-126 (161)
142 1xm3_A Thiazole biosynthesis p 27.2 79 0.0027 30.7 5.6 31 73-103 178-209 (264)
143 1h1y_A D-ribulose-5-phosphate 27.1 58 0.002 30.5 4.5 69 35-106 138-206 (228)
144 1ypf_A GMP reductase; GUAC, pu 26.9 93 0.0032 31.2 6.2 73 18-101 102-177 (336)
145 1z41_A YQJM, probable NADH-dep 26.7 1.3E+02 0.0046 30.0 7.3 84 15-101 222-307 (338)
146 3fa4_A 2,3-dimethylmalate lyas 26.5 1.2E+02 0.0041 30.8 6.9 65 27-92 30-102 (302)
147 1vcf_A Isopentenyl-diphosphate 26.3 2E+02 0.0068 28.5 8.4 90 3-107 178-291 (332)
148 3f4w_A Putative hexulose 6 pho 26.2 1.1E+02 0.0037 27.8 6.0 59 28-98 70-131 (211)
149 2tps_A Protein (thiamin phosph 26.1 55 0.0019 30.0 4.0 75 28-107 129-206 (227)
150 2ftp_A Hydroxymethylglutaryl-C 25.8 2E+02 0.0069 28.3 8.3 80 19-104 27-109 (302)
151 3igs_A N-acetylmannosamine-6-p 25.7 72 0.0024 30.6 4.9 61 27-98 93-153 (232)
152 3igs_A N-acetylmannosamine-6-p 25.7 1.6E+02 0.0056 28.1 7.4 63 28-98 142-207 (232)
153 3q58_A N-acetylmannosamine-6-p 25.7 1.8E+02 0.0061 27.8 7.6 62 29-98 143-207 (229)
154 3paj_A Nicotinate-nucleotide p 25.6 1.6E+02 0.0053 30.3 7.6 63 31-107 247-309 (320)
155 1vhc_A Putative KHG/KDPG aldol 25.5 60 0.0021 31.1 4.3 34 61-98 101-134 (224)
156 1qpo_A Quinolinate acid phosph 25.2 80 0.0027 31.6 5.3 69 28-107 207-275 (284)
157 2c6q_A GMP reductase 2; TIM ba 24.8 62 0.0021 33.0 4.5 76 26-106 173-257 (351)
158 2bdq_A Copper homeostasis prot 24.6 1.1E+02 0.0038 30.0 6.0 41 23-67 77-117 (224)
159 3hgj_A Chromate reductase; TIM 24.6 1.6E+02 0.0053 29.8 7.4 81 16-100 233-317 (349)
160 3gnn_A Nicotinate-nucleotide p 24.5 95 0.0032 31.5 5.7 65 29-107 223-287 (298)
161 1vyr_A Pentaerythritol tetrani 24.4 86 0.003 32.0 5.5 78 22-101 161-271 (364)
162 1viz_A PCRB protein homolog; s 24.3 65 0.0022 31.5 4.3 58 15-82 13-70 (240)
163 1rqb_A Transcarboxylase 5S sub 23.9 30 0.001 37.8 2.0 50 277-326 199-254 (539)
164 3l0g_A Nicotinate-nucleotide p 23.7 99 0.0034 31.5 5.6 61 33-107 225-285 (300)
165 1eep_A Inosine 5'-monophosphat 23.6 1.9E+02 0.0067 29.5 8.0 79 26-107 206-291 (404)
166 1p0k_A Isopentenyl-diphosphate 23.5 1.7E+02 0.0057 29.2 7.3 89 8-101 116-209 (349)
167 3i65_A Dihydroorotate dehydrog 23.3 1.1E+02 0.0038 32.3 6.1 94 12-105 273-378 (415)
168 3kht_A Response regulator; PSI 23.2 2.6E+02 0.0089 22.6 7.3 40 59-98 66-107 (144)
169 1o94_A Tmadh, trimethylamine d 23.0 55 0.0019 36.1 4.0 80 22-102 149-258 (729)
170 1ps9_A 2,4-dienoyl-COA reducta 22.7 88 0.003 33.9 5.4 76 25-101 144-248 (671)
171 2ze3_A DFA0005; organic waste 22.3 1.2E+02 0.0041 30.2 5.9 64 27-92 28-99 (275)
172 1eye_A DHPS 1, dihydropteroate 22.3 1.4E+02 0.0047 29.8 6.3 81 17-102 22-108 (280)
173 3lab_A Putative KDPG (2-keto-3 22.3 65 0.0022 31.3 3.8 23 76-98 114-136 (217)
174 1twd_A Copper homeostasis prot 21.9 1.3E+02 0.0044 30.0 6.0 66 22-96 73-143 (256)
175 1qop_A Tryptophan synthase alp 21.7 1.5E+02 0.0052 28.6 6.4 44 59-104 193-237 (268)
176 3r2g_A Inosine 5'-monophosphat 21.7 3.2E+02 0.011 28.2 9.1 75 27-107 154-234 (361)
177 1x1o_A Nicotinate-nucleotide p 21.7 1.8E+02 0.0061 29.1 7.0 63 31-107 212-274 (286)
178 1wv2_A Thiazole moeity, thiazo 21.5 2.3E+02 0.0078 28.5 7.7 63 28-97 149-212 (265)
179 1s2w_A Phosphoenolpyruvate pho 21.5 1.2E+02 0.004 30.6 5.6 64 27-92 31-101 (295)
180 2ztj_A Homocitrate synthase; ( 21.1 2E+02 0.0067 29.6 7.4 75 19-103 22-99 (382)
181 1kbi_A Cytochrome B2, L-LCR; f 21.0 2.2E+02 0.0075 30.6 8.0 81 26-108 355-439 (511)
182 4fxs_A Inosine-5'-monophosphat 21.0 1.8E+02 0.0062 30.9 7.3 69 26-98 284-360 (496)
183 3m47_A Orotidine 5'-phosphate 20.9 73 0.0025 30.4 3.9 68 23-105 138-206 (228)
184 1vrd_A Inosine-5'-monophosphat 20.9 88 0.003 32.8 4.8 75 28-106 292-374 (494)
185 3mcm_A 2-amino-4-hydroxy-6-hyd 20.8 1.9E+02 0.0065 30.9 7.3 105 8-114 190-319 (442)
186 2v82_A 2-dehydro-3-deoxy-6-pho 20.7 1.2E+02 0.0042 27.6 5.2 53 28-98 73-125 (212)
187 3ble_A Citramalate synthase fr 20.5 71 0.0024 32.3 3.9 79 19-104 38-122 (337)
188 4af0_A Inosine-5'-monophosphat 20.4 1.2E+02 0.0042 33.4 5.9 79 9-98 269-347 (556)
No 1
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=9.4e-48 Score=400.05 Aligned_cols=198 Identities=17% Similarity=0.161 Sum_probs=171.4
Q ss_pred cccccccceeeeccccccccccccccccchh---------hhhhcccCcccccceeeecccCCCCCccccccccccccCC
Q psy15335 196 HQSTHQEALIINTDDVASKSSEKDTLYTKSS---------EISDSLYKPRQYEMWLQHPSINGKNGVSNEDSSSTNGENG 266 (552)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~---------e~~~~~~~~r~~~~~~v~piqgG~~~~l~~~sa~~~~~~~ 266 (552)
-|..-.-|+++.+|+|+|.... ..|.+.+ +..+... +. ...+.+|+|||.|.|+++.||+.+.++
T Consensus 141 iQ~~lgsDI~m~lDe~~~~~~~--~~~~~~sv~rT~rWa~r~~~~~~--~~-~~~lfgiVQGg~~~dLR~~sa~~l~~~- 214 (381)
T 2ash_A 141 VQIALGSDICMVFDHCPVPDAD--YEEVKEATERTYRWALRSKKAFK--TE-NQALFGIVQGGIYPDLRRESALQLTSI- 214 (381)
T ss_dssp HHHHHTCSEEECCCCCCC--CC--HHHHHHHHHHHHHHHHHHHHHCC--CS-SCEEEEEECCTTCHHHHHHHHHHHHTT-
T ss_pred HHHHhCCCEEEECCcCCCCCCC--HHHHHHHHHHHHHHHHHHHHHhh--CC-CCcEEEEEcCCCCHHHHHHHHHHHHhc-
Confidence 3555567889999999998733 3332222 1222111 11 344568999999999999999998875
Q ss_pred CCCCcccccCCCc---ccccHHHHHHHHHhhccccCccccccC-Cccchh-hccCCCCceecccc---ccCCceeccCCc
Q psy15335 267 LSNADSSSINGKN---ELSNTSDIYSSMESDIHQSTHQEALII-NTDDVA-SKSSEKDTLYTKSS---EISDSLYKPRQY 338 (552)
Q Consensus 267 ~~~Fdg~AIGG~l---ek~~~~~Iv~~~~~~LP~~kPrHL~Gi-~P~dIf-aValGvDtFDcv~p---Ar~Gr~lt~~G~ 338 (552)
+|+||||||+. ++++|+++|.++++.||++|||||||+ +|++|+ +|++|||||||++| ||+|++||++|
T Consensus 215 --~~~GyaIGGlsvGe~~~~~~~~l~~~~~~LP~~kPRyLmGvG~P~~il~~V~~GvDmFDcv~Ptr~Ar~G~~lt~~G- 291 (381)
T 2ash_A 215 --GFDGYAIGGLSIGEERSLTLEMTEVTVEFLPEDKPRYFMGGGSPELILELVDRGVDMFDSVFPTRIARHGTALTWNG- 291 (381)
T ss_dssp --CCSEEEECSCSSSSCHHHHHHHHHHHHTTSCTTSCEEECSCCCHHHHHHHHTTTCCEEEESHHHHHHHTTEEEETTE-
T ss_pred --CCceEEecCcccCCCHHHHHHHHHHHHhhCCCCCcEEEcCCCCHHHHHHHHHcCCCEEeCChhhhhhcCceEeccCC-
Confidence 69999999963 778999999999999999999999999 999998 99999999999999 99999999999
Q ss_pred eEEecCCccccCCCCccCCCCCccCCCCCHHHHhhhhccCccchhhHHHhhhhhHHHhhhccCC
Q psy15335 339 EMWLQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLSICNSSNGVSINGDKN 402 (552)
Q Consensus 339 ~l~L~~~~y~~Df~PIde~C~C~tC~~yTRAYLhhL~ka~E~l~~rLLa~HNL~~~~~L~~~~r 402 (552)
+++|++++|+.||+|||++|+||||++|||||||||++++|+|+.+||++|||+++.+||+.||
T Consensus 292 ~i~l~~~~y~~D~~Pld~~C~C~tC~~ysRAYLhHL~~~~E~l~~~LltiHNl~~~~~l~~~iR 355 (381)
T 2ash_A 292 KLNLKASYNKRSLEPVDERCGCYTCKNFTRSYIHHLFDRGEVLGQILLTIHNINFMISLMKEVR 355 (381)
T ss_dssp EEETTSGGGTTCCSCSCTTCCSHHHHHCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEecchhhccCCCCCCCCCCCccCcccCHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998
No 2
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=100.00 E-value=1.6e-47 Score=399.08 Aligned_cols=199 Identities=17% Similarity=0.213 Sum_probs=166.0
Q ss_pred cccccccceeeeccccccccccccccccchh---------hhhhcccCccccc----ceeeecccCCCCCcccccccccc
Q psy15335 196 HQSTHQEALIINTDDVASKSSEKDTLYTKSS---------EISDSLYKPRQYE----MWLQHPSINGKNGVSNEDSSSTN 262 (552)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~---------e~~~~~~~~r~~~----~~~v~piqgG~~~~l~~~sa~~~ 262 (552)
-|..-+-|+++.+|+|+|..... .|.+.+ +..+... +.++ ..+.+++|||.|.|+++.||+.+
T Consensus 143 iq~~lg~DI~m~lDe~~~~~~~~--~~~~~sv~rT~rW~~r~~~~~~--~~~~~~~~~~lfgiVQGg~~~dLR~~sa~~l 218 (386)
T 3bld_A 143 IQHLLGSDIVMAFDECTPYPATP--SRAASSMERSMRWAKRSRDAFD--SRKEQAENAALFGIQQGSVFENLRQQSADAL 218 (386)
T ss_dssp HHHHHTCSEEECCCCCCCSSCCH--HHHHHHHHHHHHHHHHHHHHHH--TSHHHHHHCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHhCCCEEEecCcCCCCCCCH--HHHHHHHHHHHHHHHHHHHHhh--ccCcccccccEEEEEcCCCCHHHHHHHHHHH
Confidence 35555678899999999986432 232222 1222111 1112 34558999999999999999998
Q ss_pred ccCCCCCCcccccCCCc---ccccHHHHHHHHHhhccccCccccccC-Cccchh-hccCCCCceecccc---ccCCceec
Q psy15335 263 GENGLSNADSSSINGKN---ELSNTSDIYSSMESDIHQSTHQEALII-NTDDVA-SKSSEKDTLYTKSS---EISDSLYK 334 (552)
Q Consensus 263 ~~~~~~~Fdg~AIGG~l---ek~~~~~Iv~~~~~~LP~~kPrHL~Gi-~P~dIf-aValGvDtFDcv~p---Ar~Gr~lt 334 (552)
.++ +|+||||||+. ++++|+++|.++++.||++|||||||+ +|++|+ +|++|||||||++| ||+|++||
T Consensus 219 ~~~---~~~GyaIGGlsvge~~~~~~~~l~~~~~~LP~~kPRylmGvg~P~~il~~V~~GvDmFDcv~ptr~Ar~G~alt 295 (386)
T 3bld_A 219 AEI---GFDGYAVGGLAGGEGQDEMFRVLDFSVPMLPDDKPHYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFT 295 (386)
T ss_dssp HHH---CCSEEEECSCSSSSCHHHHHHHHHHHGGGSCTTSCEEETTCCCHHHHHHHHTTTCCEEC----------CEECC
T ss_pred Hhc---CCCCeeEcCcccCCCHHHHHHHHHHHHhhCCCCCcEEEeCCCCHHHHHHHHHcCCCEEeCcHHHHHHhCCEEEc
Confidence 875 69999999963 778999999999999999999999999 999998 99999999999999 99999999
Q ss_pred cCCceEEecCCccccCCCCccCCCCCccCCCCCHHHHhhhhccCccchhhHHHhhhhhHHHhhhccCC
Q psy15335 335 PRQYEMWLQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLSICNSSNGVSINGDKN 402 (552)
Q Consensus 335 ~~G~~l~L~~~~y~~Df~PIde~C~C~tC~~yTRAYLhhL~ka~E~l~~rLLa~HNL~~~~~L~~~~r 402 (552)
+.| +++|++++|+.||+|||++|+||||++|||||||||++++|+|+.+||++|||+++.+||+.||
T Consensus 296 ~~g-~i~l~~~~y~~D~~Pld~~C~C~tC~~ysRAYLhHL~~~~E~l~~~LltiHNl~~~~~l~~~iR 362 (386)
T 3bld_A 296 WDG-PINIRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMTEHNIAFYQQLMQKIR 362 (386)
T ss_dssp TTC-CEETTSGGGTTCCSCSSSSCCSHHHHHCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCc-cEECcchhhccCCCCCCCCCCCccccccCHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999
No 3
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=100.00 E-value=1.6e-38 Score=345.67 Aligned_cols=187 Identities=12% Similarity=0.022 Sum_probs=155.8
Q ss_pred cccccccceeeeccccccccccccccccchhhhhh------cccCcccccceeeecccCCCCCccccccccccccCCCCC
Q psy15335 196 HQSTHQEALIINTDDVASKSSEKDTLYTKSSEISD------SLYKPRQYEMWLQHPSINGKNGVSNEDSSSTNGENGLSN 269 (552)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~e~~~------~~~~~r~~~~~~v~piqgG~~~~l~~~sa~~~~~~~~~~ 269 (552)
-|..-+-|+++.+|+|+|.... ..|.+.+..+. .+.. + . ..+.+|+|||.|.|+++.||+.+.++ +
T Consensus 117 iq~~lg~DI~m~lD~~~~~~~~--~~~~~~s~~rT~rw~~r~~~~-~-~-~~lfgiVQGg~~~dLR~~sa~~l~~~---~ 188 (582)
T 1iq8_A 117 FQHRIGVDIGTFLDIPTPPDAP--REQAVKELEITLSRAREAEEI-K-E-IPMNATIQGSTYTDLRRYAARRLSSM---N 188 (582)
T ss_dssp HHHHTTCSBBCCCCCCCCTTCC--HHHHHHHHHHHHHHHHHHHHH-C-C-SCBBCCBCCTTCHHHHHHHHHHHHHS---C
T ss_pred HHHhhCCCEEEecCcCCCCCCC--HHHHHHHHHHHHHHHHHHHhc-C-C-CeEEEEEeCCCCHHHHHHHHHHHHhC---C
Confidence 3555567888999999998743 23322221111 1110 1 1 34559999999999999999998874 5
Q ss_pred CcccccCCCc---cc---ccHHHHHHHHHhhccccCccccccC-Cccchh-hccCCCCceecccc---ccCCceeccCCc
Q psy15335 270 ADSSSINGKN---EL---SNTSDIYSSMESDIHQSTHQEALII-NTDDVA-SKSSEKDTLYTKSS---EISDSLYKPRQY 338 (552)
Q Consensus 270 Fdg~AIGG~l---ek---~~~~~Iv~~~~~~LP~~kPrHL~Gi-~P~dIf-aValGvDtFDcv~p---Ar~Gr~lt~~G~ 338 (552)
|+||||||+. ++ .++.++|..+++.||++|||||||+ +|++|+ +|++|||+|||++| ||+|++||++|
T Consensus 189 ~~G~aIGg~~~~~e~~~~~~~~~~l~~~~~~LP~~kPr~lmGvg~P~~i~~~v~~GvD~FDcv~ptr~Ar~G~~~t~~g- 267 (582)
T 1iq8_A 189 FEIHPIGGVVPLLESYRFRDVVDIVISSKMALRPDRPVHLFGAGHPIVFALAVAMGVDLFDSASYALYAKDDRYMTPEG- 267 (582)
T ss_dssp CSBEEECSCHHHHHTTCHHHHHHHHHHHHHHSCTTSCEEETTCCCGGGHHHHHHTTCCEEEESHHHHHHHTTEEEETTE-
T ss_pred CCeEEecCccchhhhccHHHHHHHHHHHHhhCCCCCcEEecCCCCHHHHHHHHHcCCcEEecchhhhhhcCCEEEecCC-
Confidence 9999999984 34 3568888999999999999999999 999998 99999999999999 99999999999
Q ss_pred eEEecCCccccCCCCccCCCCCccCCCCCHHHHhhhhccCccchhhHHHhhhhhHHHhhhccCC
Q psy15335 339 EMWLQHPRYVTDFTPILAECECLTCQHHTRAYIHHLLNTKEMLAPVLLSICNSSNGVSINGDKN 402 (552)
Q Consensus 339 ~l~L~~~~y~~Df~PIde~C~C~tC~~yTRAYLhhL~ka~E~l~~rLLa~HNL~~~~~L~~~~r 402 (552)
+++|++++| ++|+||||++|||||||||++++| .+||++|||+++.+||+.||
T Consensus 268 ~~~l~~~~~--------~~C~C~tC~~~sraYl~HL~~~~~---~~Ll~iHNl~~~~~l~~~iR 320 (582)
T 1iq8_A 268 TKRLDELDY--------FPCSCPVCSKYTPQELREMPKEER---TRLLALHNLWVIKEEIKRVK 320 (582)
T ss_dssp EEEGGGCSS--------CCCCSTTTTTCCHHHHTTSCHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred ceecccccc--------CCCCCcccCccCHHHHHHhhhhhh---HHHHHHHHHHHHHHHHHHHH
Confidence 999999977 389999999999999999999876 89999999999999999999
No 4
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=99.97 E-value=1.1e-30 Score=272.07 Aligned_cols=108 Identities=33% Similarity=0.509 Sum_probs=102.1
Q ss_pred CCceEEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHH
Q psy15335 8 DTCVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNI 87 (552)
Q Consensus 8 ~q~LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dI 87 (552)
+|++|||||||.|+|||++||+++.+++|+||+|||+++ ||+ +++|.++|+++++.||++|||||||+|+|++|
T Consensus 188 ~~~lfgiVQGg~~~dLR~~sa~~l~~~~~~GyaIGGlsv-Ge~-----~~~~~~~l~~~~~~LP~~kPRyLmGvG~P~~i 261 (381)
T 2ash_A 188 NQALFGIVQGGIYPDLRRESALQLTSIGFDGYAIGGLSI-GEE-----RSLTLEMTEVTVEFLPEDKPRYFMGGGSPELI 261 (381)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHTTCCSEEEECSCSS-SSC-----HHHHHHHHHHHHTTSCTTSCEEECSCCCHHHH
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHhcCCceEEecCccc-CCC-----HHHHHHHHHHHHhhCCCCCcEEEcCCCCHHHH
Confidence 689999999999999999999999999999999999998 775 78899999999999999999999999999999
Q ss_pred HHHHHcCCccccChhHHHhhccCeEEeecccccC
Q psy15335 88 VQFVQRGIDMFDSGLPLVLADRGCAFTFQYTRHI 121 (552)
Q Consensus 88 l~aValGVDmFDcv~Ptr~AR~G~aLTf~~t~~~ 121 (552)
+.+|++|||||||++|+|+||+|+|||+.|++++
T Consensus 262 l~~V~~GvDmFDcv~Ptr~Ar~G~~lt~~G~i~l 295 (381)
T 2ash_A 262 LELVDRGVDMFDSVFPTRIARHGTALTWNGKLNL 295 (381)
T ss_dssp HHHHTTTCCEEEESHHHHHHHTTEEEETTEEEET
T ss_pred HHHHHcCCCEEeCChhhhhhcCceEeccCCceEe
Confidence 9999999999999999999999999998665443
No 5
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=99.96 E-value=9.4e-31 Score=273.00 Aligned_cols=106 Identities=34% Similarity=0.481 Sum_probs=91.0
Q ss_pred CceEEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHH
Q psy15335 9 TCVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIV 88 (552)
Q Consensus 9 q~LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl 88 (552)
|++|||||||.|+|||++||+++.+++|+||+|||+++ ||+ +++|.++|+++++.||++|||||||+|+|++|+
T Consensus 196 ~~lfgiVQGg~~~dLR~~sa~~l~~~~~~GyaIGGlsv-ge~-----~~~~~~~l~~~~~~LP~~kPRylmGvg~P~~il 269 (386)
T 3bld_A 196 AALFGIQQGSVFENLRQQSADALAEIGFDGYAVGGLAG-GEG-----QDEMFRVLDFSVPMLPDDKPHYLMGVGKPDDIV 269 (386)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHCCSEEEECSCSS-SSC-----HHHHHHHHHHHGGGSCTTSCEEETTCCCHHHHH
T ss_pred ccEEEEEcCCCCHHHHHHHHHHHHhcCCCCeeEcCccc-CCC-----HHHHHHHHHHHHhhCCCCCcEEEeCCCCHHHHH
Confidence 89999999999999999999999999999999999998 774 788999999999999999999999999999999
Q ss_pred HHHHcCCccccChhHHHhhccCeEEeeccccc
Q psy15335 89 QFVQRGIDMFDSGLPLVLADRGCAFTFQYTRH 120 (552)
Q Consensus 89 ~aValGVDmFDcv~Ptr~AR~G~aLTf~~t~~ 120 (552)
.+|++|||||||++|+|+||+|+|||+.|+++
T Consensus 270 ~~V~~GvDmFDcv~ptr~Ar~G~alt~~g~i~ 301 (386)
T 3bld_A 270 GAVERGIDMFDCVLPTRSGRNGQAFTWDGPIN 301 (386)
T ss_dssp HHHTTTCCEEC----------CEECCTTCCEE
T ss_pred HHHHcCCCEEeCcHHHHHHhCCEEEcCCccEE
Confidence 99999999999999999999999999866443
No 6
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=99.93 E-value=4.7e-27 Score=255.81 Aligned_cols=112 Identities=23% Similarity=0.227 Sum_probs=101.5
Q ss_pred CCceEEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHH
Q psy15335 8 DTCVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNI 87 (552)
Q Consensus 8 ~q~LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dI 87 (552)
+|++|||||||.|+|||++||+++.+++|+||+|||+.. .. +..+.+++.++|..+++.||++|||||||+|+|++|
T Consensus 161 ~~~lfgiVQGg~~~dLR~~sa~~l~~~~~~G~aIGg~~~-~~--e~~~~~~~~~~l~~~~~~LP~~kPr~lmGvg~P~~i 237 (582)
T 1iq8_A 161 EIPMNATIQGSTYTDLRRYAARRLSSMNFEIHPIGGVVP-LL--ESYRFRDVVDIVISSKMALRPDRPVHLFGAGHPIVF 237 (582)
T ss_dssp CSCBBCCBCCTTCHHHHHHHHHHHHHSCCSBEEECSCHH-HH--HTTCHHHHHHHHHHHHHHSCTTSCEEETTCCCGGGH
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHHhCCCCeEEecCccc-hh--hhccHHHHHHHHHHHHhhCCCCCcEEecCCCCHHHH
Confidence 489999999999999999999999999999999999864 11 112357889999999999999999999999999999
Q ss_pred HHHHHcCCccccChhHHHhhccCeEEeecccccCC
Q psy15335 88 VQFVQRGIDMFDSGLPLVLADRGCAFTFQYTRHIP 122 (552)
Q Consensus 88 l~aValGVDmFDcv~Ptr~AR~G~aLTf~~t~~~~ 122 (552)
+.+|++|||||||++|+|+||+|+|||+.|++++-
T Consensus 238 ~~~v~~GvD~FDcv~ptr~Ar~G~~~t~~g~~~l~ 272 (582)
T 1iq8_A 238 ALAVAMGVDLFDSASYALYAKDDRYMTPEGTKRLD 272 (582)
T ss_dssp HHHHHTTCCEEEESHHHHHHHTTEEEETTEEEEGG
T ss_pred HHHHHcCCcEEecchhhhhhcCCEEEecCCceecc
Confidence 99999999999999999999999999999876553
No 7
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=91.80 E-value=0.53 Score=47.92 Aligned_cols=78 Identities=15% Similarity=0.080 Sum_probs=53.0
Q ss_pred CCHHHHHHHHHHHHcCCcceEEEc---cccCCCCCccccChhHHHHHHHHhccCCCCCCcEeec---CCCCHHHHHHHHH
Q psy15335 19 LDLSLRRYCAELYATRDVHGFLID---GLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQ---GPWSPMNIVQFVQ 92 (552)
Q Consensus 19 ~~~DLR~~SA~eL~~l~f~GyaIG---Gl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLm---GvG~P~dIl~aVa 92 (552)
+..+...+-++.|.+.|++-+=+| |+.. ..+.--...+.-.+.++.+++.+| +.|..+| |.+...+|-.|.+
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~-ssp~~g~~~~~~~e~l~~i~~~~~-~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVAHGDGLQG-SSFNYGFGRHTDLEYIEAVAGEIS-HAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECSCTTSTTC-CBTTTBCCSSCHHHHHHHHHTTCS-SSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCC-CCCcccCCCCCHHHHHHHHHhhCC-CCEEEEEecCCcccHHHHHHHHh
Confidence 567778888999999999999887 3332 000000011223445666666665 5676767 8889999999999
Q ss_pred cCCccc
Q psy15335 93 RGIDMF 98 (552)
Q Consensus 93 lGVDmF 98 (552)
.|||.|
T Consensus 105 aGvd~v 110 (345)
T 1nvm_A 105 AGARVV 110 (345)
T ss_dssp HTCCEE
T ss_pred CCcCEE
Confidence 999986
No 8
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=88.49 E-value=1.2 Score=45.21 Aligned_cols=79 Identities=10% Similarity=0.035 Sum_probs=65.2
Q ss_pred cCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeec-----CCCCHHHHHHHH
Q psy15335 17 GGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQ-----GPWSPMNIVQFV 91 (552)
Q Consensus 17 GG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLm-----GvG~P~dIl~aV 91 (552)
....++.-.+-++.+.+.|..-+.|.+..+ .+.++++.++|.++++.+|++.|..++ |.| ....+.|+
T Consensus 144 ~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G------~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~a-vAn~laA~ 216 (345)
T 1nvm_A 144 HMIPAEKLAEQGKLMESYGATCIYMADSGG------AMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLG-VANSIVAV 216 (345)
T ss_dssp TSSCHHHHHHHHHHHHHHTCSEEEEECTTC------CCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCH-HHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCcC------ccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHH-HHHHHHHH
Confidence 445677777888889999999999987663 246899999999999999888999884 655 56888999
Q ss_pred HcCCccccChh
Q psy15335 92 QRGIDMFDSGL 102 (552)
Q Consensus 92 alGVDmFDcv~ 102 (552)
+.|+|.||++.
T Consensus 217 ~aGa~~vd~tv 227 (345)
T 1nvm_A 217 EEGCDRVDASL 227 (345)
T ss_dssp HTTCCEEEEBG
T ss_pred HcCCCEEEecc
Confidence 99999999975
No 9
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=88.17 E-value=1.4 Score=43.98 Aligned_cols=78 Identities=14% Similarity=0.066 Sum_probs=64.8
Q ss_pred CCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC---CCC-HHHHHHHHHc
Q psy15335 18 GLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG---PWS-PMNIVQFVQR 93 (552)
Q Consensus 18 G~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG---vG~-P~dIl~aVal 93 (552)
-..++.-.+-++.+.+.|.+-++|.-.++ .+.+.++.++|..+++.+| +.|..+++ .|- ...++.|+..
T Consensus 155 ~~~~~~~~~~~~~~~~~G~d~i~l~DT~G------~~~P~~~~~lv~~l~~~~~-~~~l~~H~Hn~~Gla~An~laAv~a 227 (302)
T 2ftp_A 155 DVDPRQVAWVARELQQMGCYEVSLGDTIG------VGTAGATRRLIEAVASEVP-RERLAGHFHDTYGQALANIYASLLE 227 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEESSS------CCCHHHHHHHHHHHTTTSC-GGGEEEEEBCTTSCHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCC------CcCHHHHHHHHHHHHHhCC-CCeEEEEeCCCccHHHHHHHHHHHh
Confidence 36788888889999999999999984442 2468999999999999997 57888775 775 5679999999
Q ss_pred CCccccChh
Q psy15335 94 GIDMFDSGL 102 (552)
Q Consensus 94 GVDmFDcv~ 102 (552)
|++.||++.
T Consensus 228 Ga~~vd~tv 236 (302)
T 2ftp_A 228 GIAVFDSSV 236 (302)
T ss_dssp TCCEEEEBG
T ss_pred CCCEEEecc
Confidence 999999876
No 10
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=87.61 E-value=1.2 Score=44.96 Aligned_cols=79 Identities=16% Similarity=0.144 Sum_probs=64.3
Q ss_pred cCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC---CCC-HHHHHHHHH
Q psy15335 17 GGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG---PWS-PMNIVQFVQ 92 (552)
Q Consensus 17 GG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG---vG~-P~dIl~aVa 92 (552)
|-..++.-.+-++.+.++|.+-+.|.-.. ..+.++++.++|..+++.+| +.|..+++ .|- ....+.|+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~------G~~~P~~v~~lv~~l~~~~~-~~~l~~H~Hnd~Gla~AN~laAv~ 224 (307)
T 1ydo_A 152 KDVPIEQVIRLSEALFEFGISELSLGDTI------GAANPAQVETVLEALLARFP-ANQIALHFHDTRGTALANMVTALQ 224 (307)
T ss_dssp BCCCHHHHHHHHHHHHHHTCSCEEEECSS------CCCCHHHHHHHHHHHHTTSC-GGGEEEECBGGGSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEcCCC------CCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCCchHHHHHHHHHH
Confidence 55678888999999999999999988433 23578999999999999997 56776654 342 678999999
Q ss_pred cCCccccChh
Q psy15335 93 RGIDMFDSGL 102 (552)
Q Consensus 93 lGVDmFDcv~ 102 (552)
.|+|.||++.
T Consensus 225 aGa~~vd~tv 234 (307)
T 1ydo_A 225 MGITVFDGSA 234 (307)
T ss_dssp HTCCEEEEBG
T ss_pred hCCCEEEEcc
Confidence 9999999986
No 11
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=87.39 E-value=1.6 Score=44.47 Aligned_cols=77 Identities=12% Similarity=0.100 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC---CC-CHHHHHHHHHcC
Q psy15335 19 LDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG---PW-SPMNIVQFVQRG 94 (552)
Q Consensus 19 ~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG---vG-~P~dIl~aValG 94 (552)
..++.-.+-++.+.++|.+.+.|.-.. ..+.++++.++|..+++.+| +.|..++. .| -....+.|+..|
T Consensus 166 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~------G~~~P~~v~~lv~~l~~~~p-~~~i~~H~Hnd~GlA~AN~laAv~aG 238 (337)
T 3ble_A 166 NSPDYVKSLVEHLSKEHIERIFLPDTL------GVLSPEETFQGVDSLIQKYP-DIHFEFHGHNDYDLSVANSLQAIRAG 238 (337)
T ss_dssp HCHHHHHHHHHHHHTSCCSEEEEECTT------CCCCHHHHHHHHHHHHHHCT-TSCEEEECBCTTSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC------CCcCHHHHHHHHHHHHHhcC-CCeEEEEecCCcchHHHHHHHHHHhC
Confidence 346777788899999999999987433 23578999999999999997 67777653 33 267899999999
Q ss_pred CccccChh
Q psy15335 95 IDMFDSGL 102 (552)
Q Consensus 95 VDmFDcv~ 102 (552)
+|.||++.
T Consensus 239 a~~vd~tv 246 (337)
T 3ble_A 239 VKGLHASI 246 (337)
T ss_dssp CSEEEEBG
T ss_pred CCEEEEec
Confidence 99999986
No 12
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=86.40 E-value=1.2 Score=44.57 Aligned_cols=87 Identities=17% Similarity=0.150 Sum_probs=67.7
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 29 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT--GE~~-~Ls~~Er~~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~ 104 (307)
T 3s5o_A 29 TAEVDYGKLEENLHKLGTFPFRGFVVQGSN--GEFP-FLTSSERLEVVSRVRQAMPKNRLLL-AGSGCESTQATVEMTVS 104 (307)
T ss_dssp TSCBCHHHHHHHHHHHTTSCCSEEEESSGG--GTGG-GSCHHHHHHHHHHHHHTSCTTSEEE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cchh-hCCHHHHHHHHHHHHHHcCCCCcEE-EecCCCCHHHHHHHHHH
Confidence 477888888888999999999999999977 4653 4579999999999999998877866 68885 33333 5
Q ss_pred HHHcCCccccChhHHHh
Q psy15335 90 FVQRGIDMFDSGLPLVL 106 (552)
Q Consensus 90 aValGVDmFDcv~Ptr~ 106 (552)
|.++|+|-+=.+.|+.+
T Consensus 105 A~~~Gadavlv~~P~y~ 121 (307)
T 3s5o_A 105 MAQVGADAAMVVTPCYY 121 (307)
T ss_dssp HHHTTCSEEEEECCCTT
T ss_pred HHHcCCCEEEEcCCCcC
Confidence 56789986666666544
No 13
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=83.71 E-value=1.4 Score=44.10 Aligned_cols=86 Identities=14% Similarity=0.178 Sum_probs=65.2
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT--GE~~-~Ls~eEr~~v~~~~~~~~~grvpVi-aGvg~~~t~~ai~la~~ 102 (301)
T 1xky_A 27 NGNIDFAKTTKLVNYLIDNGTTAIVVGGTT--GESP-TLTSEEKVALYRHVVSVVDKRVPVI-AGTGSNNTHASIDLTKK 102 (301)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTT--TTGG-GSCHHHHHHHHHHHHHHHTTSSCEE-EECCCSCHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCCCceEE-eCCCCCCHHHHHHHHHH
Confidence 478888888888898989999999999876 5653 4578999999999998887777755 88886 34443 3
Q ss_pred HHHcCCccccChhHHH
Q psy15335 90 FVQRGIDMFDSGLPLV 105 (552)
Q Consensus 90 aValGVDmFDcv~Ptr 105 (552)
|.+.|+|-+=.+.|++
T Consensus 103 A~~~Gadavlv~~P~y 118 (301)
T 1xky_A 103 ATEVGVDAVMLVAPYY 118 (301)
T ss_dssp HHHTTCSEEEEECCCS
T ss_pred HHhcCCCEEEEcCCCC
Confidence 5667988665555543
No 14
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=83.24 E-value=1.7 Score=43.28 Aligned_cols=85 Identities=12% Similarity=0.071 Sum_probs=64.3
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHH----
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQ---- 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~---- 89 (552)
.|..+.+-=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.++
T Consensus 18 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~ 93 (294)
T 3b4u_A 18 DGTVDIDAMIAHARRCLSNGCDSVTLFGTT--GEGC-SVGSRERQAILSSFIAAGIAPSRIV-TGVLVDSIEDAADQSAE 93 (294)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTT--TTGG-GSCHHHHHHHHHHHHHTTCCGGGEE-EEECCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-EeCCCccHHHHHHHHHH
Confidence 478888888888899999999999999876 4653 4579999999999999888777755 88886 344443
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.+.|+|-+=.+.|+
T Consensus 94 A~~~Gadavlv~~P~ 108 (294)
T 3b4u_A 94 ALNAGARNILLAPPS 108 (294)
T ss_dssp HHHTTCSEEEECCCC
T ss_pred HHhcCCCEEEEcCCc
Confidence 456788855444443
No 15
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=83.03 E-value=1.6 Score=43.81 Aligned_cols=85 Identities=14% Similarity=0.149 Sum_probs=64.2
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+-=++-++.+.+.|++|+++.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 31 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~grvpvi-aGvg~~st~~ai~la~~ 106 (304)
T 3cpr_A 31 SGDIDIAAGREVAAYLVDKGLDSLVLAGTT--GESP-TTTAAEKLELLKAVREEVGDRAKLI-AGVGTNNTRTSVELAEA 106 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESSTT--TTTT-TSCHHHHHHHHHHHHHHHTTTSEEE-EECCCSCHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-ecCCCCCHHHHHHHHHH
Confidence 478899988888898999999999999876 4653 3578999999999998887767744 88886 34443 3
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.+.|+|-+=.+.|+
T Consensus 107 A~~~Gadavlv~~P~ 121 (304)
T 3cpr_A 107 AASAGADGLLVVTPY 121 (304)
T ss_dssp HHHTTCSEEEEECCC
T ss_pred HHhcCCCEEEECCCC
Confidence 556788855544443
No 16
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=82.93 E-value=2.4 Score=42.04 Aligned_cols=83 Identities=14% Similarity=0.087 Sum_probs=63.8
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+-=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++.... .+.|+|. ..+.+ .
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT--GE~~-~Ls~eEr~~v~~~~~~~~~g----ViaGvg~~~t~~ai~la~~ 86 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEKGIDAIFVNGTT--GLGP-ALSKDEKRQNLNALYDVTHK----LIFQVGSLNLNDVMELVKF 86 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEETSTT--TTGG-GSCHHHHHHHHHHHTTTCSC----EEEECCCSCHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCC----eEEeeCCCCHHHHHHHHHH
Confidence 477888888888899999999999999876 5653 45899999999999988765 6789996 33433 3
Q ss_pred HHHcCCccccChhHHH
Q psy15335 90 FVQRGIDMFDSGLPLV 105 (552)
Q Consensus 90 aValGVDmFDcv~Ptr 105 (552)
|.+.|+|-+=.+.|+.
T Consensus 87 A~~~Gadavlv~~P~y 102 (288)
T 2nuw_A 87 SNEMDILGVSSHSPYY 102 (288)
T ss_dssp HHTSCCSEEEECCCCS
T ss_pred HHhcCCCEEEEcCCcC
Confidence 5567998666666654
No 17
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=82.78 E-value=1.4 Score=44.10 Aligned_cols=85 Identities=18% Similarity=0.112 Sum_probs=63.3
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHH----
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQ---- 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~---- 89 (552)
.|..+.+-=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.++
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT--GE~~-~Ls~eEr~~v~~~~~~~~~grvpVi-aGvg~~~t~~ai~la~~ 101 (303)
T 2wkj_A 26 QQALDKASLRRLVQFNIQQGIDGLYVGGST--GEAF-VQSLSEREQVLEIVAEEAKGKIKLI-AHVGCVSTAESQQLAAS 101 (303)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTT--TTGG-GSCHHHHHHHHHHHHHHHTTTSEEE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECeec--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-EecCCCCHHHHHHHHHH
Confidence 478888888888888989999999999876 5653 4578999999999998887666754 78886 344433
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.+.|+|-+=.+.|+
T Consensus 102 A~~~Gadavlv~~P~ 116 (303)
T 2wkj_A 102 AKRYGFDAVSAVTPF 116 (303)
T ss_dssp HHHHTCSEEEEECCC
T ss_pred HHhCCCCEEEecCCC
Confidence 456788855444443
No 18
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=82.11 E-value=1.5 Score=43.65 Aligned_cols=85 Identities=14% Similarity=0.086 Sum_probs=63.4
Q ss_pred ccCCCHHHHHHHHHHHHc-CCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----
Q psy15335 16 QGGLDLSLRRYCAELYAT-RDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV---- 88 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~-l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl---- 88 (552)
.|..+.+-=++-++.+.+ .|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+
T Consensus 18 dg~iD~~~l~~lv~~li~~~Gv~gl~~~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~ 93 (293)
T 1f6k_A 18 DGTINEKGLRQIIRHNIDKMKVDGLYVGGST--GENF-MLSTEEKKEIFRIAKDEAKDQIALI-AQVGSVNLKEAVELGK 93 (293)
T ss_dssp TSCBCHHHHHHHHHHHHHTSCCSEEEESSGG--GTGG-GSCHHHHHHHHHHHHHHHTTSSEEE-EECCCSCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhhCCCcEEEeCccc--cchh-hCCHHHHHHHHHHHHHHhCCCCeEE-EecCCCCHHHHHHHHH
Confidence 478888888888888888 999999999876 4653 3578999999999998887767755 88886 34433
Q ss_pred HHHHcCCccccChhHH
Q psy15335 89 QFVQRGIDMFDSGLPL 104 (552)
Q Consensus 89 ~aValGVDmFDcv~Pt 104 (552)
.|.+.|+|-+=.+.|+
T Consensus 94 ~a~~~Gadavlv~~P~ 109 (293)
T 1f6k_A 94 YATELGYDCLSAVTPF 109 (293)
T ss_dssp HHHHHTCSEEEEECCC
T ss_pred HHHhcCCCEEEECCCC
Confidence 3455688855444443
No 19
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=81.89 E-value=1.7 Score=43.22 Aligned_cols=85 Identities=14% Similarity=0.079 Sum_probs=64.2
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.| .+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 17 dg-iD~~~l~~lv~~li~~Gv~gl~~~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~gr~pvi-~Gvg~~~t~~ai~la~~ 91 (291)
T 3a5f_A 17 TG-VDFDKLSELIEWHIKSKTDAIIVCGTT--GEAT-TMTETERKETIKFVIDKVNKRIPVI-AGTGSNNTAASIAMSKW 91 (291)
T ss_dssp SS-BCHHHHHHHHHHHHHTTCCEEEESSGG--GTGG-GSCHHHHHHHHHHHHHHHTTSSCEE-EECCCSSHHHHHHHHHH
T ss_pred CC-cCHHHHHHHHHHHHHcCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-EeCCcccHHHHHHHHHH
Confidence 47 888888888899999999999999876 4653 4578999999999998887777754 88886 33433 3
Q ss_pred HHHcCCccccChhHHH
Q psy15335 90 FVQRGIDMFDSGLPLV 105 (552)
Q Consensus 90 aValGVDmFDcv~Ptr 105 (552)
|.+.|+|-+=.+.|+.
T Consensus 92 a~~~Gadavlv~~P~y 107 (291)
T 3a5f_A 92 AESIGVDGLLVITPYY 107 (291)
T ss_dssp HHHTTCSEEEEECCCS
T ss_pred HHhcCCCEEEEcCCCC
Confidence 5567988665555543
No 20
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=81.80 E-value=3.5 Score=41.25 Aligned_cols=79 Identities=8% Similarity=0.006 Sum_probs=63.1
Q ss_pred cCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCC--CCcEeec-----CCCCHHHHHH
Q psy15335 17 GGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPN--DKLRIIQ-----GPWSPMNIVQ 89 (552)
Q Consensus 17 GG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~--dKPRyLm-----GvG~P~dIl~ 89 (552)
|-..++.-.+.++.+.++|.+-+.|.-..+ .+.+.++.+++..+++.+|. +.|..++ |.+ ....+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G------~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla-~AN~la 217 (293)
T 3ewb_X 145 TRSDRAFLIEAVQTAIDAGATVINIPDTVG------YTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMA-TANALA 217 (293)
T ss_dssp GGSCHHHHHHHHHHHHHTTCCEEEEECSSS------CCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCH-HHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEecCCCC------CCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChH-HHHHHH
Confidence 446788888899999999999999885443 35789999999999999985 3566553 333 578999
Q ss_pred HHHcCCccccChh
Q psy15335 90 FVQRGIDMFDSGL 102 (552)
Q Consensus 90 aValGVDmFDcv~ 102 (552)
|+..|+|.||++.
T Consensus 218 A~~aGa~~vd~sv 230 (293)
T 3ewb_X 218 AIENGARRVEGTI 230 (293)
T ss_dssp HHHTTCCEEEEBG
T ss_pred HHHhCCCEEEeec
Confidence 9999999999976
No 21
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=81.33 E-value=1.6 Score=43.41 Aligned_cols=85 Identities=18% Similarity=0.139 Sum_probs=64.5
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+-=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~ 90 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDNGTDAILVCGTT--GESP-TLTFEEHEKVIEFAVKRAAGRIKVI-AGTGGNATHEAVHLTAH 90 (294)
T ss_dssp TTEECHHHHHHHHHHHHTTTCCEEEESSTT--TTGG-GSCHHHHHHHHHHHHHHHTTSSEEE-EECCCSCHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-EecCCCCHHHHHHHHHH
Confidence 678888888888999999999999999876 4653 4578999999999998887767754 88886 34443 3
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.+.|+|-+=.+.|+
T Consensus 91 A~~~Gadavlv~~P~ 105 (294)
T 2ehh_A 91 AKEVGADGALVVVPY 105 (294)
T ss_dssp HHHTTCSEEEEECCC
T ss_pred HHhcCCCEEEECCCC
Confidence 456788865555554
No 22
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=81.13 E-value=2.2 Score=46.60 Aligned_cols=79 Identities=8% Similarity=0.082 Sum_probs=64.1
Q ss_pred CCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC---CC-CHHHHHHHHHcC
Q psy15335 19 LDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG---PW-SPMNIVQFVQRG 94 (552)
Q Consensus 19 ~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG---vG-~P~dIl~aValG 94 (552)
+.++.-.+.++++.++|.+-+.|.-..+ .+.+.++.++|.++++.+|++.|..++. .| .....+.|+..|
T Consensus 172 ~~~e~~~~~a~~l~~~Gad~I~L~DT~G------~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAG 245 (539)
T 1rqb_A 172 HTVEGYVKLAGQLLDMGADSIALKDMAA------LLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAG 245 (539)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTC------CCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCC------CcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhC
Confidence 4677888889999999999998874332 3468999999999999998778888753 33 267899999999
Q ss_pred CccccChhH
Q psy15335 95 IDMFDSGLP 103 (552)
Q Consensus 95 VDmFDcv~P 103 (552)
+|.||++.-
T Consensus 246 a~~VD~ti~ 254 (539)
T 1rqb_A 246 VDVVDTAIS 254 (539)
T ss_dssp CSEEEEBCG
T ss_pred CCEEEEecc
Confidence 999999984
No 23
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=81.05 E-value=2.8 Score=41.56 Aligned_cols=79 Identities=10% Similarity=0.066 Sum_probs=61.8
Q ss_pred cCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC---CCC-HHHHHHHHH
Q psy15335 17 GGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG---PWS-PMNIVQFVQ 92 (552)
Q Consensus 17 GG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG---vG~-P~dIl~aVa 92 (552)
|-..++.-.+-++.+.++|.+.+.|.-.. ..+.++++.+++.++++.+| +.|..+++ .|- ....+.|+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~------G~~~P~~~~~lv~~l~~~~~-~~~i~~H~Hn~~Gla~An~laA~~ 223 (298)
T 2cw6_A 151 GKISPAKVAEVTKKFYSMGCYEISLGDTI------GVGTPGIMKDMLSAVMQEVP-LAALAVHCHDTYGQALANTLMALQ 223 (298)
T ss_dssp BSCCHHHHHHHHHHHHHTTCSEEEEEETT------SCCCHHHHHHHHHHHHHHSC-GGGEEEEEBCTTSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEecCCC------CCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCCchHHHHHHHHHH
Confidence 44578888889999999999999887333 23578999999999998886 45665543 343 577899999
Q ss_pred cCCccccChh
Q psy15335 93 RGIDMFDSGL 102 (552)
Q Consensus 93 lGVDmFDcv~ 102 (552)
.|+|.||++.
T Consensus 224 aGa~~vd~tv 233 (298)
T 2cw6_A 224 MGVSVVDSSV 233 (298)
T ss_dssp TTCCEEEEBT
T ss_pred hCCCEEEeec
Confidence 9999999864
No 24
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=80.57 E-value=1.5 Score=43.41 Aligned_cols=86 Identities=17% Similarity=0.131 Sum_probs=64.7
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+-=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~ 90 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGTT--GESP-TLSHEEHKKVIEKVVDVVNGRVQVI-AGAGSNCTEEAIELSVF 90 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESSTT--TTGG-GSCHHHHHHHHHHHHHHHTTSSEEE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-EeCCCCCHHHHHHHHHH
Confidence 678888888888899999999999999876 5653 4578999999999998887766754 88886 33333 3
Q ss_pred HHHcCCccccChhHHH
Q psy15335 90 FVQRGIDMFDSGLPLV 105 (552)
Q Consensus 90 aValGVDmFDcv~Ptr 105 (552)
|.+.|+|-+=.+.|+.
T Consensus 91 a~~~Gadavlv~~P~y 106 (289)
T 2yxg_A 91 AEDVGADAVLSITPYY 106 (289)
T ss_dssp HHHHTCSEEEEECCCS
T ss_pred HHhcCCCEEEECCCCC
Confidence 4567888665555543
No 25
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=80.26 E-value=2.5 Score=41.99 Aligned_cols=83 Identities=13% Similarity=0.043 Sum_probs=63.0
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHH----
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQ---- 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~---- 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++.... .+.|+|. ..+.++
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt--GE~~-~Ls~eEr~~v~~~~~~~~~g----viaGvg~~~t~~ai~la~~ 86 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRKGIDKLFVNGTT--GLGP-SLSPEEKLENLKAVYDVTNK----IIFQVGGLNLDDAIRLAKL 86 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTT--TTGG-GSCHHHHHHHHHHHHTTCSC----EEEECCCSCHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHcCC----EEEecCCCCHHHHHHHHHH
Confidence 477888888888898999999999999876 5653 45899999999999988765 6789986 444444
Q ss_pred HHHcCCccccChhHHH
Q psy15335 90 FVQRGIDMFDSGLPLV 105 (552)
Q Consensus 90 aValGVDmFDcv~Ptr 105 (552)
|.+.|+|-+=.+.|+.
T Consensus 87 A~~~Gadavlv~~P~y 102 (293)
T 1w3i_A 87 SKDFDIVGIASYAPYY 102 (293)
T ss_dssp GGGSCCSEEEEECCCS
T ss_pred HHhcCCCEEEEcCCCC
Confidence 3446888665555543
No 26
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=79.63 E-value=1.6 Score=43.57 Aligned_cols=86 Identities=17% Similarity=0.111 Sum_probs=65.5
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+-=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gi~v~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~ 90 (297)
T 2rfg_A 15 NGQVDEKALAGLVDWQIKHGAHGLVPVGTT--GESP-TLTEEEHKRVVALVAEQAQGRVPVI-AGAGSNNPVEAVRYAQH 90 (297)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEECSSGG--GTGG-GSCHHHHHHHHHHHHHHHTTSSCBE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cchh-hCCHHHHHHHHHHHHHHhCCCCeEE-EccCCCCHHHHHHHHHH
Confidence 577888888888898989999999999876 4653 3578999999999998887767755 88886 33333 3
Q ss_pred HHHcCCccccChhHHH
Q psy15335 90 FVQRGIDMFDSGLPLV 105 (552)
Q Consensus 90 aValGVDmFDcv~Ptr 105 (552)
|.+.|+|-+=.+.|+.
T Consensus 91 A~~~Gadavlv~~P~y 106 (297)
T 2rfg_A 91 AQQAGADAVLCVAGYY 106 (297)
T ss_dssp HHHHTCSEEEECCCTT
T ss_pred HHhcCCCEEEEcCCCC
Confidence 5567999766666654
No 27
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=79.35 E-value=1.7 Score=43.55 Aligned_cols=85 Identities=15% Similarity=0.138 Sum_probs=64.1
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT--GE~~-~Ls~eEr~~vi~~~~~~~~grvpVi-aGvg~~st~~ai~la~~ 102 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTT--GESP-TVNEDEREKLVSRTLEIVDGKIPVI-VGAGTNSTEKTLKLVKQ 102 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGG--GTGG-GCCHHHHHHHHHHHHHHHTTSSCEE-EECCCSCHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccc--cchh-hCCHHHHHHHHHHHHHHhCCCCeEE-EcCCCccHHHHHHHHHH
Confidence 688888888888888889999999999876 4653 4578999999999998887767755 88886 34433 3
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.+.|+|-+=.+.|+
T Consensus 103 A~~~Gadavlv~~P~ 117 (306)
T 1o5k_A 103 AEKLGANGVLVVTPY 117 (306)
T ss_dssp HHHHTCSEEEEECCC
T ss_pred HHhcCCCEEEECCCC
Confidence 456788855554443
No 28
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=79.30 E-value=2.2 Score=42.48 Aligned_cols=85 Identities=18% Similarity=0.202 Sum_probs=65.7
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||. ..|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt--GE~-~~Ls~~Er~~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~ 97 (297)
T 3flu_A 22 DGSIHYEQLRDLIDWHIENGTDGIVAVGTT--GES-ATLSVEEHTAVIEAVVKHVAKRVPVI-AGTGANNTVEAIALSQA 97 (297)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESSTT--TTG-GGSCHHHHHHHHHHHHHHHTTSSCEE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccc--cCc-ccCCHHHHHHHHHHHHHHhCCCCcEE-EeCCCcCHHHHHHHHHH
Confidence 478888888889999999999999999866 565 34579999999999998887777765 68885 44444 4
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.+.|+|-+=.+.|+
T Consensus 98 a~~~Gadavlv~~P~ 112 (297)
T 3flu_A 98 AEKAGADYTLSVVPY 112 (297)
T ss_dssp HHHTTCSEEEEECCC
T ss_pred HHHcCCCEEEECCCC
Confidence 557888865555554
No 29
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=79.20 E-value=3.3 Score=40.80 Aligned_cols=77 Identities=16% Similarity=0.091 Sum_probs=61.2
Q ss_pred CCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC---CCC-HHHHHHHHHc
Q psy15335 18 GLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG---PWS-PMNIVQFVQR 93 (552)
Q Consensus 18 G~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG---vG~-P~dIl~aVal 93 (552)
-..++.-.+-++.+.+.|++-++|.=.+ | .+.++++.++|.++.+.+| +.|..+++ .|- ...++.|+..
T Consensus 151 ~~~~~~~~~~~~~~~~~G~d~i~l~Dt~--G----~~~P~~~~~lv~~l~~~~~-~~~l~~H~Hn~~Gla~an~l~Ai~a 223 (295)
T 1ydn_A 151 PVTPQAVASVTEQLFSLGCHEVSLGDTI--G----RGTPDTVAAMLDAVLAIAP-AHSLAGHYHDTGGRALDNIRVSLEK 223 (295)
T ss_dssp ECCHHHHHHHHHHHHHHTCSEEEEEETT--S----CCCHHHHHHHHHHHHTTSC-GGGEEEEEBCTTSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEecCCC--C----CcCHHHHHHHHHHHHHhCC-CCeEEEEECCCcchHHHHHHHHHHh
Confidence 4678888888888889999999998433 2 2468999999999999987 45666653 554 4678999999
Q ss_pred CCccccCh
Q psy15335 94 GIDMFDSG 101 (552)
Q Consensus 94 GVDmFDcv 101 (552)
|++.||++
T Consensus 224 G~~~vd~s 231 (295)
T 1ydn_A 224 GLRVFDAS 231 (295)
T ss_dssp TCCEEEEB
T ss_pred CCCEEEec
Confidence 99999987
No 30
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=78.83 E-value=1.5 Score=43.56 Aligned_cols=85 Identities=16% Similarity=0.073 Sum_probs=64.5
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+-=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~ 90 (292)
T 2vc6_A 15 DDRIDEVALHDLVEWQIEEGSFGLVPCGTT--GESP-TLSKSEHEQVVEITIKTANGRVPVI-AGAGSNSTAEAIAFVRH 90 (292)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEETTSGG--GTGG-GSCHHHHHHHHHHHHHHHTTSSCBE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-EecCCccHHHHHHHHHH
Confidence 577888888888899999999999999876 4653 4578999999999998887767755 88886 33333 3
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.+.|+|-+=.+.|+
T Consensus 91 A~~~Gadavlv~~P~ 105 (292)
T 2vc6_A 91 AQNAGADGVLIVSPY 105 (292)
T ss_dssp HHHTTCSEEEEECCC
T ss_pred HHHcCCCEEEEcCCC
Confidence 566788866555554
No 31
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=78.51 E-value=3.7 Score=43.99 Aligned_cols=76 Identities=13% Similarity=0.167 Sum_probs=61.1
Q ss_pred CHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC---CC-CHHHHHHHHHcCC
Q psy15335 20 DLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG---PW-SPMNIVQFVQRGI 95 (552)
Q Consensus 20 ~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG---vG-~P~dIl~aValGV 95 (552)
.++.-.+.++++.++|.+-+.|.-..+ .+.+.++.++|..+++.+ +.|..++. .| .....+.|+..|+
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I~l~DT~G------~~~P~~v~~lv~~l~~~~--~~~i~~H~Hnd~GlAvAN~laAv~AGa 227 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALKDMAG------ILTPYAAEELVSTLKKQV--DVELHLHCHSTAGLADMTLLKAIEAGV 227 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTS------CCCHHHHHHHHHHHHHHC--CSCEEEEECCTTSCHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCC------CcCHHHHHHHHHHHHHhc--CCeEEEEECCCCChHHHHHHHHHHhCC
Confidence 667788899999999999999874332 346889999999998887 57877753 33 3678999999999
Q ss_pred ccccChhH
Q psy15335 96 DMFDSGLP 103 (552)
Q Consensus 96 DmFDcv~P 103 (552)
|.||++.-
T Consensus 228 ~~VD~ti~ 235 (464)
T 2nx9_A 228 DRVDTAIS 235 (464)
T ss_dssp SEEEEBCG
T ss_pred CEEEEecc
Confidence 99999875
No 32
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=78.35 E-value=1.7 Score=44.22 Aligned_cols=85 Identities=14% Similarity=0.029 Sum_probs=64.0
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+.=++-++.+.+.|++|+++.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 49 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT--GE~~-~Ls~eEr~~vi~~~ve~~~grvpVi-aGvg~~st~eai~la~~ 124 (332)
T 2r8w_A 49 AGRVDIEAFSALIARLDAAEVDSVGILGST--GIYM-YLTREERRRAIEAAATILRGRRTLM-AGIGALRTDEAVALAKD 124 (332)
T ss_dssp TCCBCHHHHHHHHHHHHHHTCSEEEESSTT--TTGG-GSCHHHHHHHHHHHHHHHTTSSEEE-EEECCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-EecCCCCHHHHHHHHHH
Confidence 478888888888888888999999999876 5653 4578999999999998887767755 78886 33433 3
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.+.|+|-+=.+.|+
T Consensus 125 A~~~Gadavlv~~P~ 139 (332)
T 2r8w_A 125 AEAAGADALLLAPVS 139 (332)
T ss_dssp HHHHTCSEEEECCCC
T ss_pred HHhcCCCEEEECCCC
Confidence 556788866555554
No 33
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=77.98 E-value=2.4 Score=43.41 Aligned_cols=85 Identities=16% Similarity=0.128 Sum_probs=64.5
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHH----
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQ---- 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~---- 89 (552)
.|..+.+.=++-++.+.+.|++|+++.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.++
T Consensus 46 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtT--GE~~-~Ls~eEr~~vi~~~ve~~~grvpVi-aGvg~~st~eai~la~~ 121 (343)
T 2v9d_A 46 DGQLDKPGTAALIDDLIKAGVDGLFFLGSG--GEFS-QLGAEERKAIARFAIDHVDRRVPVL-IGTGGTNARETIELSQH 121 (343)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSTT--TTGG-GSCHHHHHHHHHHHHHHHTTSSCEE-EECCSSCHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccc--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-EecCCCCHHHHHHHHHH
Confidence 488899988888999999999999999876 5653 4578999999999998887777755 88885 444443
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.+.|+|-+=.+.|+
T Consensus 122 A~~~Gadavlv~~P~ 136 (343)
T 2v9d_A 122 AQQAGADGIVVINPY 136 (343)
T ss_dssp HHHHTCSEEEEECCS
T ss_pred HHhcCCCEEEECCCC
Confidence 456788865555554
No 34
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=77.93 E-value=2.8 Score=41.47 Aligned_cols=83 Identities=16% Similarity=0.102 Sum_probs=62.5
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+-=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++.... .+.|+|. ..+.+ .
T Consensus 13 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~g----vi~Gvg~~~t~~ai~la~~ 85 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSKGVDVVFVAGTT--GLGP-ALSLQEKMELTDAATSAARR----VIVQVASLNADEAIALAKY 85 (286)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEETSTT--TTGG-GSCHHHHHHHHHHHHHHCSS----EEEECCCSSHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHCCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCC----EEEeeCCCCHHHHHHHHHH
Confidence 577888888888888889999999999876 5653 45789999999999888755 7789997 33333 3
Q ss_pred HHHcCCccccChhHHH
Q psy15335 90 FVQRGIDMFDSGLPLV 105 (552)
Q Consensus 90 aValGVDmFDcv~Ptr 105 (552)
|.+.|+|-+=.+.|+.
T Consensus 86 A~~~Gadavlv~~P~y 101 (286)
T 2r91_A 86 AESRGAEAVASLPPYY 101 (286)
T ss_dssp HHHTTCSEEEECCSCS
T ss_pred HHhcCCCEEEEcCCcC
Confidence 5567988655555543
No 35
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=77.23 E-value=1.7 Score=43.17 Aligned_cols=85 Identities=13% Similarity=0.076 Sum_probs=63.4
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHHH---
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQF--- 90 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~a--- 90 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+++
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~ 91 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVASGTSAIVSVGTT--GESA-TLNHDEHADVVMMTLDLADGRIPVI-AGTGANATAEAISLTQR 91 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTT--TTGG-GSCHHHHHHHHHHHHHHHTTSSCEE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cchh-hCCHHHHHHHHHHHHHHhCCCCcEE-EecCCccHHHHHHHHHH
Confidence 477888888888888888999999999876 4653 4578999999999998887767754 88886 4444443
Q ss_pred -HHcCCccccChhHH
Q psy15335 91 -VQRGIDMFDSGLPL 104 (552)
Q Consensus 91 -ValGVDmFDcv~Pt 104 (552)
.+.|+|-+=.+.|+
T Consensus 92 a~~~Gadavlv~~P~ 106 (292)
T 2ojp_A 92 FNDSGIVGCLTVTPY 106 (292)
T ss_dssp TTTSSCSEEEEECCC
T ss_pred HHhcCCCEEEECCCC
Confidence 44688855554444
No 36
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=77.01 E-value=2.5 Score=42.67 Aligned_cols=86 Identities=17% Similarity=0.140 Sum_probs=66.5
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 37 dg~iD~~~l~~li~~li~~Gv~Gl~v~GtT--GE~~-~Ls~~Er~~v~~~~v~~~~grvpVi-aGvg~~st~~ai~la~~ 112 (315)
T 3si9_A 37 NGAIDEKAFCNFVEWQITQGINGVSPVGTT--GESP-TLTHEEHKRIIELCVEQVAKRVPVV-AGAGSNSTSEAVELAKH 112 (315)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEECSSTT--TTGG-GSCHHHHHHHHHHHHHHHTTSSCBE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccc--cCcc-ccCHHHHHHHHHHHHHHhCCCCcEE-EeCCCCCHHHHHHHHHH
Confidence 478899988889999999999999999866 5654 4579999999999998887777865 68885 55544 4
Q ss_pred HHHcCCccccChhHHH
Q psy15335 90 FVQRGIDMFDSGLPLV 105 (552)
Q Consensus 90 aValGVDmFDcv~Ptr 105 (552)
|.+.|+|-+=.+.|++
T Consensus 113 A~~~Gadavlv~~P~y 128 (315)
T 3si9_A 113 AEKAGADAVLVVTPYY 128 (315)
T ss_dssp HHHTTCSEEEEECCCS
T ss_pred HHhcCCCEEEECCCCC
Confidence 5678888655555543
No 37
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=76.11 E-value=2.7 Score=42.43 Aligned_cols=85 Identities=18% Similarity=0.067 Sum_probs=65.4
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHH----
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQ---- 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~---- 89 (552)
.|..+.+.=++=++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.++
T Consensus 39 dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtT--GE~~-~Ls~~Er~~v~~~~v~~~~grvpVi-aGvg~~~t~~ai~la~~ 114 (315)
T 3na8_A 39 DGGLDLPALGRSIERLIDGGVHAIAPLGST--GEGA-YLSDPEWDEVVDFTLKTVAHRVPTI-VSVSDLTTAKTVRRAQF 114 (315)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEECSSGG--GTGG-GSCHHHHHHHHHHHHHHHTTSSCBE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-EecCCCCHHHHHHHHHH
Confidence 578888888889999999999999999976 4653 4578999999999999888777866 68884 444443
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.++|+|-+=.+.|+
T Consensus 115 A~~~Gadavlv~~P~ 129 (315)
T 3na8_A 115 AESLGAEAVMVLPIS 129 (315)
T ss_dssp HHHTTCSEEEECCCC
T ss_pred HHhcCCCEEEECCCC
Confidence 567788855555444
No 38
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=76.07 E-value=3.2 Score=43.14 Aligned_cols=85 Identities=14% Similarity=0.124 Sum_probs=64.7
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHHH---
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQF--- 90 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~a--- 90 (552)
.|..+.+-=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+++
T Consensus 74 dg~ID~~al~~lv~~li~~Gv~Gl~v~GTT--GE~~-~Ls~eEr~~vi~~~ve~~~grvpVi-aGvg~~st~eai~la~~ 149 (360)
T 4dpp_A 74 DGRFDLEAYDDLVNIQIQNGAEGVIVGGTT--GEGQ-LMSWDEHIMLIGHTVNCFGGSIKVI-GNTGSNSTREAIHATEQ 149 (360)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTT--TTGG-GSCHHHHHHHHHHHHHHHTTTSEEE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEecccc--cChh-hCCHHHHHHHHHHHHHHhCCCCeEE-EecCCCCHHHHHHHHHH
Confidence 588898888888999999999999999866 5653 4578999999999998887666755 78884 5555544
Q ss_pred -HHcCCccccChhHH
Q psy15335 91 -VQRGIDMFDSGLPL 104 (552)
Q Consensus 91 -ValGVDmFDcv~Pt 104 (552)
.+.|+|-+=.+.|+
T Consensus 150 A~~~Gadavlvv~Py 164 (360)
T 4dpp_A 150 GFAVGMHAALHINPY 164 (360)
T ss_dssp HHHTTCSEEEEECCC
T ss_pred HHHcCCCEEEEcCCC
Confidence 45788865555443
No 39
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=76.05 E-value=5.1 Score=45.22 Aligned_cols=85 Identities=15% Similarity=0.078 Sum_probs=67.5
Q ss_pred CCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCC---C-CHHHHHHHHHcC
Q psy15335 19 LDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGP---W-SPMNIVQFVQRG 94 (552)
Q Consensus 19 ~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGv---G-~P~dIl~aValG 94 (552)
+.++.-.+.++++.++|.+-+.|.-.. ..+.+.++.++|.++++.+| +.|.+++.- | .....+.|+..|
T Consensus 258 ~~~e~~~~~a~~l~~~Ga~~I~l~DT~------G~~~P~~v~~lV~~lk~~~p-~~~I~~H~Hnd~GlAvANslaAveAG 330 (718)
T 3bg3_A 258 YSLQYYMGLAEELVRAGTHILCIKDMA------GLLKPTACTMLVSSLRDRFP-DLPLHIHTHDTSGAGVAAMLACAQAG 330 (718)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEECTT------SCCCHHHHHHHHHHHHHHST-TCCEEEECCCTTSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCcC------CCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCccHHHHHHHHHHHhC
Confidence 467888889999999999999987444 24578999999999999997 788888652 2 267899999999
Q ss_pred CccccChhHHHhhccC
Q psy15335 95 IDMFDSGLPLVLADRG 110 (552)
Q Consensus 95 VDmFDcv~Ptr~AR~G 110 (552)
+|.||++.--.-.|-|
T Consensus 331 a~~VD~ti~GlGertG 346 (718)
T 3bg3_A 331 ADVVDVAADSMSGMTS 346 (718)
T ss_dssp CSEEEEBCGGGCSTTS
T ss_pred CCEEEecCcccccccC
Confidence 9999999755444433
No 40
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=75.97 E-value=2.7 Score=41.70 Aligned_cols=85 Identities=15% Similarity=0.139 Sum_probs=64.9
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHH----
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQ---- 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~---- 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.++
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~ 91 (291)
T 3tak_A 16 DGGVDWKSLEKLVEWHIEQGTNSIVAVGTT--GEAS-TLSMEEHTQVIKEIIRVANKRIPII-AGTGANSTREAIELTKA 91 (291)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTT--TTGG-GSCHHHHHHHHHHHHHHHTTSSCEE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccc--cccc-cCCHHHHHHHHHHHHHHhCCCCeEE-EeCCCCCHHHHHHHHHH
Confidence 477888888888999999999999999866 5653 4578999999999998887777765 68885 555443
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.++|+|-+=.+.|+
T Consensus 92 a~~~Gadavlv~~P~ 106 (291)
T 3tak_A 92 AKDLGADAALLVTPY 106 (291)
T ss_dssp HHHHTCSEEEEECCC
T ss_pred HHhcCCCEEEEcCCC
Confidence 556788855444443
No 41
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=75.58 E-value=2.8 Score=42.31 Aligned_cols=87 Identities=15% Similarity=0.095 Sum_probs=66.5
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT--GE~~-~Ls~~Er~~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~ 101 (318)
T 3qfe_A 26 TDTLDLASQERYYAYLARSGLTGLVILGTN--AEAF-LLTREERAQLIATARKAVGPDFPIM-AGVGAHSTRQVLEHIND 101 (318)
T ss_dssp TTEECHHHHHHHHHHHHTTTCSEEEESSGG--GTGG-GSCHHHHHHHHHHHHHHHCTTSCEE-EECCCSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccc--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-EeCCCCCHHHHHHHHHH
Confidence 377888888888999999999999999877 4653 4579999999999999887777866 68885 44433 4
Q ss_pred HHHcCCccccChhHHHh
Q psy15335 90 FVQRGIDMFDSGLPLVL 106 (552)
Q Consensus 90 aValGVDmFDcv~Ptr~ 106 (552)
|.+.|+|-+=.+.|+++
T Consensus 102 a~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 102 ASVAGANYVLVLPPAYF 118 (318)
T ss_dssp HHHHTCSEEEECCCCC-
T ss_pred HHHcCCCEEEEeCCccc
Confidence 55689986666666433
No 42
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=75.25 E-value=5.9 Score=40.20 Aligned_cols=81 Identities=10% Similarity=-0.006 Sum_probs=64.4
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCC--CCcEeecC---CC-CHHHHHH
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPN--DKLRIIQG---PW-SPMNIVQ 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~--dKPRyLmG---vG-~P~dIl~ 89 (552)
.|-..++.-.+-++.+.++|.+-+.|.-..+ .+.+.++.++|..+++.+|. +.|..++. .| -....+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G------~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~la 218 (325)
T 3eeg_A 145 AGRADQAFLARMVEAVIEAGADVVNIPDTTG------YMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLA 218 (325)
T ss_dssp GGGSCHHHHHHHHHHHHHHTCSEEECCBSSS------CCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHH
T ss_pred cccchHHHHHHHHHHHHhcCCCEEEecCccC------CcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHH
Confidence 4457888888999999999999999875443 35689999999999999984 46766643 22 2578999
Q ss_pred HHHcCCccccChh
Q psy15335 90 FVQRGIDMFDSGL 102 (552)
Q Consensus 90 aValGVDmFDcv~ 102 (552)
|+..|+|.||++.
T Consensus 219 A~~aGa~~vd~tv 231 (325)
T 3eeg_A 219 ALQNGARQVECTI 231 (325)
T ss_dssp HHHHTCCEEEEBG
T ss_pred HHHhCCCEEEEec
Confidence 9999999999986
No 43
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=74.36 E-value=2.7 Score=42.11 Aligned_cols=85 Identities=13% Similarity=0.140 Sum_probs=63.6
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 30 dg~iD~~~l~~lv~~li~~Gv~gi~v~Gtt--GE~~-~Lt~~Er~~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~ 105 (304)
T 3l21_A 30 DGSLDTATAARLANHLVDQGCDGLVVSGTT--GESP-TTTDGEKIELLRAVLEAVGDRARVI-AGAGTYDTAHSIRLAKA 105 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEEESSTT--TTGG-GSCHHHHHHHHHHHHHHHTTTSEEE-EECCCSCHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccc--cchh-hCCHHHHHHHHHHHHHHhCCCCeEE-EeCCCCCHHHHHHHHHH
Confidence 477888888889999999999999999876 5653 4578999999999999887767765 78884 44444 3
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.++|+|-+=.+.|+
T Consensus 106 a~~~Gadavlv~~P~ 120 (304)
T 3l21_A 106 CAAEGAHGLLVVTPY 120 (304)
T ss_dssp HHHHTCSEEEEECCC
T ss_pred HHHcCCCEEEECCCC
Confidence 445677755444443
No 44
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=74.05 E-value=4.1 Score=40.91 Aligned_cols=86 Identities=14% Similarity=0.088 Sum_probs=66.0
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+-=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT--GE~~-~Ls~~Er~~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~ 98 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDAGSDGLCILANF--SEQF-AITDDERDVLTRTILEHVAGRVPVI-VTTSHYSTQVCAARSLR 98 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSGG--GTGG-GSCHHHHHHHHHHHHHHHTTSSCEE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cCcc-cCCHHHHHHHHHHHHHHhCCCCcEE-EecCCchHHHHHHHHHH
Confidence 588899988889999999999999999866 5654 4579999999999998887667754 78875 44444 4
Q ss_pred HHHcCCccccChhHHH
Q psy15335 90 FVQRGIDMFDSGLPLV 105 (552)
Q Consensus 90 aValGVDmFDcv~Ptr 105 (552)
|.+.|+|-+=.+.|+.
T Consensus 99 A~~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 99 AQQLGAAMVMAMPPYH 114 (309)
T ss_dssp HHHTTCSEEEECCSCB
T ss_pred HHHcCCCEEEEcCCCC
Confidence 5577888666666643
No 45
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=73.73 E-value=3.4 Score=41.68 Aligned_cols=85 Identities=16% Similarity=0.116 Sum_probs=65.3
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHH----
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQ---- 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~---- 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.++
T Consensus 38 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT--GE~~-~Ls~~Er~~v~~~~v~~~~grvpVi-aGvg~~st~eai~la~~ 113 (314)
T 3qze_A 38 QGRLDWDSLAKLVDFHLQEGTNAIVAVGTT--GESA-TLDVEEHIQVIRRVVDQVKGRIPVI-AGTGANSTREAVALTEA 113 (314)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSGG--GTGG-GCCHHHHHHHHHHHHHHHTTSSCEE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-EeCCCcCHHHHHHHHHH
Confidence 577888888888999999999999999876 4653 4578999999999998887777765 68885 455444
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.+.|+|-+=.+.|+
T Consensus 114 A~~~Gadavlv~~P~ 128 (314)
T 3qze_A 114 AKSGGADACLLVTPY 128 (314)
T ss_dssp HHHTTCSEEEEECCC
T ss_pred HHHcCCCEEEEcCCC
Confidence 557888855555443
No 46
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=73.64 E-value=5.9 Score=39.77 Aligned_cols=84 Identities=17% Similarity=0.119 Sum_probs=62.9
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++.. ...|. +.|+|. ..+.+ .
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT--GE~~-~Lt~~Er~~v~~~~v~~~-grvpV-iaGvg~~~t~~ai~la~~ 97 (313)
T 3dz1_A 23 DGKIDDVSIDRLTDFYAEVGCEGVTVLGIL--GEAP-KLDAAEAEAVATRFIKRA-KSMQV-IVGVSAPGFAAMRRLARL 97 (313)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEEESTGG--GTGG-GSCHHHHHHHHHHHHHHC-TTSEE-EEECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEeCccC--cChh-hCCHHHHHHHHHHHHHHc-CCCcE-EEecCCCCHHHHHHHHHH
Confidence 578898888889999999999999999866 5654 457999999999999988 55665 479985 44444 3
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.++|+|-.=.+.|+
T Consensus 98 A~~~Gadavlv~~P~ 112 (313)
T 3dz1_A 98 SMDAGAAGVMIAPPP 112 (313)
T ss_dssp HHHHTCSEEEECCCT
T ss_pred HHHcCCCEEEECCCC
Confidence 456788754444443
No 47
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=73.51 E-value=3.1 Score=41.51 Aligned_cols=86 Identities=15% Similarity=0.074 Sum_probs=65.9
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCC-CCcEeecCCCC--HHHHHH---
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPN-DKLRIIQGPWS--PMNIVQ--- 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~-dKPRyLmGvG~--P~dIl~--- 89 (552)
.|..+.+-=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++.... ..|.+ .|+|. ..+.++
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~g~rvpvi-aGvg~~~t~~ai~la~ 97 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAVVPVGTT--GESA-TLTHEEHRTCIEIAVETCKGTKVKVL-AGAGSNATHEAVGLAK 97 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEECSSTT--TTGG-GSCHHHHHHHHHHHHHHHTTSSCEEE-EECCCSSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCCCCCeEE-EeCCCCCHHHHHHHHH
Confidence 688888888888999999999999999866 5653 45789999999999998877 67765 69985 555544
Q ss_pred -HHHcCCccccChhHHH
Q psy15335 90 -FVQRGIDMFDSGLPLV 105 (552)
Q Consensus 90 -aValGVDmFDcv~Ptr 105 (552)
|.+.|+|-+=.+.|+.
T Consensus 98 ~a~~~Gadavlv~~P~y 114 (301)
T 3m5v_A 98 FAKEHGADGILSVAPYY 114 (301)
T ss_dssp HHHHTTCSEEEEECCCS
T ss_pred HHHHcCCCEEEEcCCCC
Confidence 4567888655555543
No 48
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=68.03 E-value=10 Score=39.31 Aligned_cols=83 Identities=6% Similarity=-0.080 Sum_probs=65.2
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCC--CCcEeecC---CC-CHHHHHH
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPN--DKLRIIQG---PW-SPMNIVQ 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~--dKPRyLmG---vG-~P~dIl~ 89 (552)
.|-..++.-.+.++.+.++|.+-+.|.-.. ..+.+.++.++|.++++.+|. +.|..++. .| -....+.
T Consensus 151 ~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~------G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~la 224 (370)
T 3rmj_A 151 ALRSEIDFLAEICGAVIEAGATTINIPDTV------GYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLA 224 (370)
T ss_dssp GGGSCHHHHHHHHHHHHHHTCCEEEEECSS------SCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCCEEEecCcc------CCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHH
Confidence 455788888899999999999999987433 245689999999999999985 36666543 22 2678999
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|+..|+|.||++.-=
T Consensus 225 Av~aGa~~vd~tv~G 239 (370)
T 3rmj_A 225 ALKGGARQVECTVNG 239 (370)
T ss_dssp HHHTTCCEEEEBGGG
T ss_pred HHHhCCCEEEEeccc
Confidence 999999999998743
No 49
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=67.93 E-value=6.4 Score=39.60 Aligned_cols=84 Identities=13% Similarity=0.118 Sum_probs=62.3
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHH----
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQ---- 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~---- 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.++
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT--GE~~-~Ls~~Er~~v~~~~~~~~~grvpVi-aGvg~~~t~~ai~la~~ 97 (311)
T 3h5d_A 22 DGSINFDAIPALIEHLLAHHTDGILLAGTT--AESP-TLTHDEELELFAAVQKVVNGRVPLI-AGVGTNDTRDSIEFVKE 97 (311)
T ss_dssp TSSBCTTHHHHHHHHHHHTTCCCEEESSTT--TTGG-GSCHHHHHHHHHHHHHHSCSSSCEE-EECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cChh-hCCHHHHHHHHHHHHHHhCCCCcEE-EeCCCcCHHHHHHHHHH
Confidence 477888888888999999999999999976 5653 4579999999999999988777865 68885 455443
Q ss_pred HHHcCC-ccccChhH
Q psy15335 90 FVQRGI-DMFDSGLP 103 (552)
Q Consensus 90 aValGV-DmFDcv~P 103 (552)
|.++|. |-+=.+.|
T Consensus 98 A~~~Ga~davlv~~P 112 (311)
T 3h5d_A 98 VAEFGGFAAGLAIVP 112 (311)
T ss_dssp HHHSCCCSEEEEECC
T ss_pred HHhcCCCcEEEEcCC
Confidence 344564 64433333
No 50
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=66.07 E-value=8.3 Score=40.58 Aligned_cols=66 Identities=18% Similarity=0.123 Sum_probs=52.1
Q ss_pred HHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccC
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDS 100 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDc 100 (552)
+.++.+.+.+++.+.|...+ | ......++|+++++.+| +.|..+-++.++++...+.+.|+|.++.
T Consensus 240 ~~a~~l~~aGvd~v~i~~~~--G------~~~~~~e~i~~i~~~~p-~~pvi~g~~~t~e~a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 240 ERVEKLVKAGVDVIVIDTAH--G------HSRRVIETLEMIKADYP-DLPVVAGNVATPEGTEALIKAGADAVKV 305 (494)
T ss_dssp HHHHHHHHTTCSEEEECCSC--C------SSHHHHHHHHHHHHHCT-TSCEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCCEEEEEecC--C------chHHHHHHHHHHHHHCC-CceEEeCCcCCHHHHHHHHHcCCCEEEE
Confidence 35677788899999997543 2 23456788888888886 6888776788999999999999999984
No 51
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=66.04 E-value=11 Score=39.41 Aligned_cols=63 Identities=14% Similarity=0.133 Sum_probs=50.3
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCcccc
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFD 99 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFD 99 (552)
++.+.+.+++.+++++.. | +.+...+.+.++...+| +.|...=+++++.....++++|+|.++
T Consensus 238 a~~l~~~G~d~ivi~~a~--g------~~~~~~~~i~~l~~~~p-~~pvi~G~v~t~~~a~~~~~~Gad~I~ 300 (491)
T 1zfj_A 238 AEALFEAGADAIVIDTAH--G------HSAGVLRKIAEIRAHFP-NRTLIAGNIATAEGARALYDAGVDVVK 300 (491)
T ss_dssp HHHHHHHTCSEEEECCSC--T------TCHHHHHHHHHHHHHCS-SSCEEEEEECSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHcCCCeEEEeeec--C------cchhHHHHHHHHHHHCC-CCcEeCCCccCHHHHHHHHHcCCCEEE
Confidence 566777899999999743 2 23456777888877775 788887788899999999999999986
No 52
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=65.12 E-value=4.4 Score=40.77 Aligned_cols=85 Identities=14% Similarity=0.163 Sum_probs=63.5
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC-HHHHH----HH
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS-PMNIV----QF 90 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~-P~dIl----~a 90 (552)
.|..+.+.=++=++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.+ .|
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT--GE~~-~Ls~eEr~~v~~~~v~~~~grvpVi-aGvg~~t~~ai~la~~A 102 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVIVPCGNT--SEFY-ALSLEEAKEEVRRTVEYVHGRALVV-AGIGYATSTAIELGNAA 102 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEECTTSGG--GTGG-GSCHHHHHHHHHHHHHHHTTSSEEE-EEECSSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccc--cCcc-cCCHHHHHHHHHHHHHHhCCCCcEE-EEeCcCHHHHHHHHHHH
Confidence 578888888889999999999999999976 4653 4578999999999998887767755 67764 33333 34
Q ss_pred HHcCCccccChhHH
Q psy15335 91 VQRGIDMFDSGLPL 104 (552)
Q Consensus 91 ValGVDmFDcv~Pt 104 (552)
.++|+|-+=.+.|+
T Consensus 103 ~~~Gadavlv~~P~ 116 (316)
T 3e96_A 103 KAAGADAVMIHMPI 116 (316)
T ss_dssp HHHTCSEEEECCCC
T ss_pred HhcCCCEEEEcCCC
Confidence 56788765555444
No 53
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=62.98 E-value=6.8 Score=39.39 Aligned_cols=85 Identities=11% Similarity=0.058 Sum_probs=62.3
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC-HHHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS-PMNIVQ----F 90 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~-P~dIl~----a 90 (552)
.|..+.+-=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.++ |
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT--GE~~-~Ls~eEr~~vi~~~~~~~~grvpVi-aGvg~st~~ai~la~~A 102 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFLLQNGIEVIVPNGNT--GEFY-ALTIEEAKQVATRVTELVNGRATVV-AGIGYSVDTAIELGKSA 102 (314)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCSEECTTSGG--GTGG-GSCHHHHHHHHHHHHHHHTTSSEEE-EEECSSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECccc--CChh-hCCHHHHHHHHHHHHHHhCCCCeEE-ecCCcCHHHHHHHHHHH
Confidence 477888888888899999999999999876 4653 3578999999999998887767755 67775 333332 3
Q ss_pred HHcCCccccChhHH
Q psy15335 91 VQRGIDMFDSGLPL 104 (552)
Q Consensus 91 ValGVDmFDcv~Pt 104 (552)
.+.|+|-+=.+.|+
T Consensus 103 ~~~Gadavlv~~P~ 116 (314)
T 3d0c_A 103 IDSGADCVMIHQPV 116 (314)
T ss_dssp HHTTCSEEEECCCC
T ss_pred HHcCCCEEEECCCC
Confidence 45677755444443
No 54
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=62.51 E-value=18 Score=38.57 Aligned_cols=81 Identities=11% Similarity=-0.006 Sum_probs=57.5
Q ss_pred CCceEEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHH
Q psy15335 8 DTCVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNI 87 (552)
Q Consensus 8 ~q~LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dI 87 (552)
+..++++-.|..... . +-++.+.+.+++.+.|+.-++ ....+.++|.++++..| +.|..+-.+.++++.
T Consensus 216 grl~v~aavG~~~~~-~-~~a~~l~~aG~d~I~id~a~g--------~~~~~~~~v~~i~~~~p-~~~Vi~g~v~t~e~a 284 (490)
T 4avf_A 216 GRLRVGAAVGTGADT-G-ERVAALVAAGVDVVVVDTAHG--------HSKGVIERVRWVKQTFP-DVQVIGGNIATAEAA 284 (490)
T ss_dssp SCBCCEEEECSSTTH-H-HHHHHHHHTTCSEEEEECSCC--------SBHHHHHHHHHHHHHCT-TSEEEEEEECSHHHH
T ss_pred Ccceeeeeeccccch-H-HHHHHHhhcccceEEecccCC--------cchhHHHHHHHHHHHCC-CceEEEeeeCcHHHH
Confidence 344555555554322 2 235566777999999985443 24566788888888886 678765448999999
Q ss_pred HHHHHcCCcccc
Q psy15335 88 VQFVQRGIDMFD 99 (552)
Q Consensus 88 l~aValGVDmFD 99 (552)
..++++|+|.+.
T Consensus 285 ~~l~~aGaD~I~ 296 (490)
T 4avf_A 285 KALAEAGADAVK 296 (490)
T ss_dssp HHHHHTTCSEEE
T ss_pred HHHHHcCCCEEE
Confidence 999999999887
No 55
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=61.86 E-value=15 Score=37.71 Aligned_cols=78 Identities=10% Similarity=0.050 Sum_probs=54.9
Q ss_pred EEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHH
Q psy15335 12 IAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFV 91 (552)
Q Consensus 12 fGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aV 91 (552)
|++-.|.. .+. .+-++.+.+.+++.+.|...+ | +++.+.++|+++++.+| +.|..+-++.++.+...++
T Consensus 144 ~~~~i~~~-~~~-~~~a~~~~~~G~d~i~i~~~~--g------~~~~~~e~i~~ir~~~~-~~pviv~~v~~~~~a~~a~ 212 (404)
T 1eep_A 144 VGAAVSID-IDT-IERVEELVKAHVDILVIDSAH--G------HSTRIIELIKKIKTKYP-NLDLIAGNIVTKEAALDLI 212 (404)
T ss_dssp CEEEECSC-TTH-HHHHHHHHHTTCSEEEECCSC--C------SSHHHHHHHHHHHHHCT-TCEEEEEEECSHHHHHHHH
T ss_pred EEEEeCCC-hhH-HHHHHHHHHCCCCEEEEeCCC--C------ChHHHHHHHHHHHHHCC-CCeEEEcCCCcHHHHHHHH
Confidence 44444542 222 233556677899999884222 2 24567888888888886 7887765788999999999
Q ss_pred HcCCccccC
Q psy15335 92 QRGIDMFDS 100 (552)
Q Consensus 92 alGVDmFDc 100 (552)
+.|+|.+..
T Consensus 213 ~~Gad~I~v 221 (404)
T 1eep_A 213 SVGADCLKV 221 (404)
T ss_dssp TTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999998877
No 56
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=60.03 E-value=2.4 Score=42.34 Aligned_cols=86 Identities=19% Similarity=0.130 Sum_probs=65.4
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHH----
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQ---- 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~---- 89 (552)
.|..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.++
T Consensus 19 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gtt--GE~~-~Ls~~Er~~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~ 94 (300)
T 3eb2_A 19 EGRVRADVMGRLCDDLIQAGVHGLTPLGST--GEFA-YLGTAQREAVVRATIEAAQRRVPVV-AGVASTSVADAVAQAKL 94 (300)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSCBBTTSGG--GTGG-GCCHHHHHHHHHHHHHHHTTSSCBE-EEEEESSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccc--cCcc-ccCHHHHHHHHHHHHHHhCCCCcEE-EeCCCCCHHHHHHHHHH
Confidence 477888888889999999999999999866 5653 4578999999999998887777865 68884 455443
Q ss_pred HHHcCCccccChhHHH
Q psy15335 90 FVQRGIDMFDSGLPLV 105 (552)
Q Consensus 90 aValGVDmFDcv~Ptr 105 (552)
|.++|+|-.=.+.|+.
T Consensus 95 a~~~Gadavlv~~P~y 110 (300)
T 3eb2_A 95 YEKLGADGILAILEAY 110 (300)
T ss_dssp HHHHTCSEEEEEECCS
T ss_pred HHHcCCCEEEEcCCCC
Confidence 4567887665555543
No 57
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=59.60 E-value=13 Score=43.95 Aligned_cols=80 Identities=13% Similarity=0.105 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCC----CHHHHHHHHHcC
Q psy15335 19 LDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPW----SPMNIVQFVQRG 94 (552)
Q Consensus 19 ~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG----~P~dIl~aValG 94 (552)
...+.-.+-++++.++|.+-+.|.-..+ .+.+.++.++|..+++.+ +.|.+++.-- .....+.|+..|
T Consensus 689 ~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G------~~~P~~~~~lv~~l~~~~--~~~i~~H~Hnt~G~a~An~laA~~aG 760 (1150)
T 3hbl_A 689 YTLEYYVKLAKELEREGFHILAIKDMAG------LLKPKAAYELIGELKSAV--DLPIHLHTHDTSGNGLLTYKQAIDAG 760 (1150)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEETTC------CCCHHHHHHHHHHHHHHC--CSCEEEEECBTTSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCeeeEcCccC------CCCHHHHHHHHHHHHHhc--CCeEEEEeCCCCcHHHHHHHHHHHhC
Confidence 4567778889999999999999874442 457889999999998886 6788774322 367899999999
Q ss_pred CccccChhHHHh
Q psy15335 95 IDMFDSGLPLVL 106 (552)
Q Consensus 95 VDmFDcv~Ptr~ 106 (552)
+|.||++.--.-
T Consensus 761 a~~vD~ai~GlG 772 (1150)
T 3hbl_A 761 VDIIDTAVASMS 772 (1150)
T ss_dssp CSEEEEBCGGGC
T ss_pred CCEEEEeccccC
Confidence 999999874433
No 58
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=59.46 E-value=8.7 Score=37.93 Aligned_cols=80 Identities=20% Similarity=0.123 Sum_probs=57.8
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHH----
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQ---- 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~---- 89 (552)
.|..+.+-=++-++.+.+. ++|+.+.|.. ||.. .|+.+|..++++.+++ ..| .+.|+|. ..+.++
T Consensus 13 dg~iD~~~l~~lv~~li~~-v~gl~v~Gtt--GE~~-~Ls~~Er~~v~~~~~~----rvp-viaGvg~~~t~~ai~la~~ 83 (283)
T 2pcq_A 13 EGRLDEEAFRELAQALEPL-VDGLLVYGSN--GEGV-HLTPEERARGLRALRP----RKP-FLVGLMEETLPQAEGALLE 83 (283)
T ss_dssp TCCBCHHHHHHHHHHHGGG-SSCCEETCTT--TTGG-GSCHHHHHHHHHTCCC----SSC-CEEEECCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhh-CCEEEECCcC--cCch-hcCHHHHHHHHHHHHh----CCc-EEEeCCCCCHHHHHHHHHH
Confidence 4778888777788888888 9999999876 5653 4589999999999988 556 4488886 344433
Q ss_pred HHHcCCccccChhHH
Q psy15335 90 FVQRGIDMFDSGLPL 104 (552)
Q Consensus 90 aValGVDmFDcv~Pt 104 (552)
|.+.|+|-+=.+.|+
T Consensus 84 A~~~Gadavlv~~P~ 98 (283)
T 2pcq_A 84 AKAAGAMALLATPPR 98 (283)
T ss_dssp HHHHTCSEEEECCCC
T ss_pred HHhcCCCEEEecCCc
Confidence 556788854444443
No 59
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=59.40 E-value=15 Score=39.18 Aligned_cols=81 Identities=12% Similarity=0.061 Sum_probs=57.8
Q ss_pred CCceEEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHH
Q psy15335 8 DTCVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNI 87 (552)
Q Consensus 8 ~q~LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dI 87 (552)
+..++++-.|..... .+-++.+.+.|++.+.|+.-++ ..+.+.++|.++++..| +.|..+-++.+++..
T Consensus 218 grL~v~aavG~~~d~--~~~a~~l~~aG~d~I~id~a~g--------~~~~~~~~i~~ir~~~p-~~~Vi~g~v~t~e~a 286 (496)
T 4fxs_A 218 GRLRVGAAVGAAPGN--EERVKALVEAGVDVLLIDSSHG--------HSEGVLQRIRETRAAYP-HLEIIGGNVATAEGA 286 (496)
T ss_dssp SCBCCEEECCSSSCC--HHHHHHHHHTTCSEEEEECSCT--------TSHHHHHHHHHHHHHCT-TCCEEEEEECSHHHH
T ss_pred cceeeeeeeccccch--HHHHHHHHhccCceEEeccccc--------cchHHHHHHHHHHHHCC-CceEEEcccCcHHHH
Confidence 344555555553222 1225556677999999986553 24566788888888886 688776568999999
Q ss_pred HHHHHcCCcccc
Q psy15335 88 VQFVQRGIDMFD 99 (552)
Q Consensus 88 l~aValGVDmFD 99 (552)
..++++|+|.+.
T Consensus 287 ~~l~~aGaD~I~ 298 (496)
T 4fxs_A 287 RALIEAGVSAVK 298 (496)
T ss_dssp HHHHHHTCSEEE
T ss_pred HHHHHhCCCEEE
Confidence 999999999887
No 60
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=58.94 E-value=12 Score=37.00 Aligned_cols=83 Identities=13% Similarity=0.183 Sum_probs=60.2
Q ss_pred CCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHHH----HH
Q psy15335 18 GLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIVQ----FV 91 (552)
Q Consensus 18 G~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl~----aV 91 (552)
..+.+.=++-++.+.+.|++|+.+.|.. ||.. .|+.+|..++++.+++......|.+ .|+|. ..+.++ |.
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~Gtt--GE~~-~Lt~~Er~~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~a~ 94 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTT--AESP-TLTTDEKELILKTVIDLVDKRVPVI-AGTGTNDTEKSIQASIQAK 94 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGG--GTGG-GSCHHHHHHHHHHHHHHHTTSSCEE-EECCCSCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccc--cccc-cCCHHHHHHHHHHHHHHhCCCCcEE-EeCCcccHHHHHHHHHHHH
Confidence 4566666677888889999999999876 4653 4578999999999998887777765 68884 555444 55
Q ss_pred HcCCccccChhHH
Q psy15335 92 QRGIDMFDSGLPL 104 (552)
Q Consensus 92 alGVDmFDcv~Pt 104 (552)
++|+|-+=.+.|+
T Consensus 95 ~~Gadavlv~~P~ 107 (292)
T 3daq_A 95 ALGADAIMLITPY 107 (292)
T ss_dssp HHTCSEEEEECCC
T ss_pred HcCCCEEEECCCC
Confidence 6788855444443
No 61
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=58.92 E-value=12 Score=44.13 Aligned_cols=82 Identities=11% Similarity=0.101 Sum_probs=64.8
Q ss_pred CCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC---CC-CHHHHHHHHHcC
Q psy15335 19 LDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG---PW-SPMNIVQFVQRG 94 (552)
Q Consensus 19 ~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG---vG-~P~dIl~aValG 94 (552)
..++.-.+.++++.++|.+-+.|.-..+ .+.+.++.++|..+++.+ +.|.+++. .| .....+.|+..|
T Consensus 706 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G------~~~P~~~~~lv~~l~~~~--~~~i~~H~Hnd~GlAvAn~laAv~aG 777 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAGAHIIAVKDMAG------LLKPAAAKVLFKALREAT--GLPIHFHTHDTSGIAAATVLAAVEAG 777 (1165)
T ss_dssp GCHHHHHHHHHHHHHTTCSEEEEEETTC------CCCHHHHHHHHHHHHHHC--SSCEEEEECBTTSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCccC------CcCHHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHhC
Confidence 6778888999999999999999875442 356889999999998888 67877743 22 267899999999
Q ss_pred CccccChhHHHhhc
Q psy15335 95 IDMFDSGLPLVLAD 108 (552)
Q Consensus 95 VDmFDcv~Ptr~AR 108 (552)
+|.||++.--.-.|
T Consensus 778 a~~vd~ti~GlGe~ 791 (1165)
T 2qf7_A 778 VDAVDAAMDALSGN 791 (1165)
T ss_dssp CSEEEEBCGGGCSB
T ss_pred CCEEEecccccCCC
Confidence 99999987544444
No 62
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=58.72 E-value=20 Score=38.47 Aligned_cols=81 Identities=9% Similarity=0.084 Sum_probs=59.6
Q ss_pred CCceEEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHH
Q psy15335 8 DTCVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNI 87 (552)
Q Consensus 8 ~q~LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dI 87 (552)
+..++++-.|.....+ ++ ++.+.+.+++.+.|..-++ ....+.++|.++++..| +.|..+-++.+++..
T Consensus 243 ~rl~V~aavg~~~d~~-er-a~aLveaGvd~I~Id~a~g--------~~~~v~~~i~~i~~~~~-~~~vi~g~v~t~e~a 311 (511)
T 3usb_A 243 GRLLVGAAVGVTADAM-TR-IDALVKASVDAIVLDTAHG--------HSQGVIDKVKEVRAKYP-SLNIIAGNVATAEAT 311 (511)
T ss_dssp SCBCCEEEECSSTTHH-HH-HHHHHHTTCSEEEEECSCT--------TSHHHHHHHHHHHHHCT-TSEEEEEEECSHHHH
T ss_pred cceeeeeeeeeccchH-HH-HHHHHhhccceEEeccccc--------chhhhhhHHHHHHHhCC-CceEEeeeeccHHHH
Confidence 3445555555543332 22 5667788999999985543 34567788888888875 578887799999999
Q ss_pred HHHHHcCCcccc
Q psy15335 88 VQFVQRGIDMFD 99 (552)
Q Consensus 88 l~aValGVDmFD 99 (552)
..+++.|+|.+.
T Consensus 312 ~~~~~aGad~i~ 323 (511)
T 3usb_A 312 KALIEAGANVVK 323 (511)
T ss_dssp HHHHHHTCSEEE
T ss_pred HHHHHhCCCEEE
Confidence 999999999887
No 63
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=57.84 E-value=29 Score=33.70 Aligned_cols=86 Identities=14% Similarity=0.094 Sum_probs=58.8
Q ss_pred CCceEEeeccC-CCHHHHHHHHHHHHcCCcceEEEccccCCCCCccc---------------cChhHHHHHHHHhccCCC
Q psy15335 8 DTCVIAPIQGG-LDLSLRRYCAELYATRDVHGFLIDGLCADEGATED---------------LGCDVVNAVLENTVPYLP 71 (552)
Q Consensus 8 ~q~LfGIVQGG-~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~---------------m~~eem~~iL~~v~~~LP 71 (552)
+..+++.|.-| .+.+.-.+-++.|.+.|++.+-||.... +|... ++.+.+.+++..+++.+|
T Consensus 16 ~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~s--dP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~ 93 (262)
T 2ekc_A 16 EKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFS--DPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFP 93 (262)
T ss_dssp BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCS--CCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred CceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCC--CcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcC
Confidence 45677766544 4556667778889999999999985332 22100 122456678888887754
Q ss_pred CCCcEeecCCCCH-------HHHHHHHHcCCc
Q psy15335 72 NDKLRIIQGPWSP-------MNIVQFVQRGID 96 (552)
Q Consensus 72 ~dKPRyLmGvG~P-------~dIl~aValGVD 96 (552)
+.|..+||-..| .++-.+.+.|+|
T Consensus 94 -~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~d 124 (262)
T 2ekc_A 94 -DIPFLLMTYYNPIFRIGLEKFCRLSREKGID 124 (262)
T ss_dssp -TSCEEEECCHHHHHHHCHHHHHHHHHHTTCC
T ss_pred -CCCEEEEecCcHHHHhhHHHHHHHHHHcCCC
Confidence 689999987776 445668899998
No 64
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=56.48 E-value=16 Score=37.63 Aligned_cols=78 Identities=12% Similarity=-0.043 Sum_probs=55.5
Q ss_pred CCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC---CC-CHHHHHHHHHcC
Q psy15335 19 LDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG---PW-SPMNIVQFVQRG 94 (552)
Q Consensus 19 ~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG---vG-~P~dIl~aValG 94 (552)
..++.-.+.++.+.++ .+.+.|.-..+ .+.+.++.++|..+++.++++.|..++. .| -....+.|+..|
T Consensus 142 ~~~~~~~~~~~~~~~~-a~~i~l~DT~G------~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aG 214 (382)
T 2ztj_A 142 SEEQDLLAVYEAVAPY-VDRVGLADTVG------VATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAG 214 (382)
T ss_dssp SCHHHHHHHHHHHGGG-CSEEEEEETTS------CCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHh-cCEEEecCCCC------CCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhC
Confidence 3566677778888888 88888764332 3467888888888887654466766642 22 256788899999
Q ss_pred CccccChhH
Q psy15335 95 IDMFDSGLP 103 (552)
Q Consensus 95 VDmFDcv~P 103 (552)
+|.||++.-
T Consensus 215 a~~vd~tv~ 223 (382)
T 2ztj_A 215 ATHVDTTIL 223 (382)
T ss_dssp CCEEEEBGG
T ss_pred CCEEEEccc
Confidence 999998763
No 65
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=55.95 E-value=54 Score=32.03 Aligned_cols=90 Identities=16% Similarity=-0.024 Sum_probs=59.2
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEcccc-----CC---CCC------------ccccChhHHHHHHHHhccCCCCCCc
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLC-----AD---EGA------------TEDLGCDVVNAVLENTVPYLPNDKL 75 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~-----v~---GE~------------~~~m~~eem~~iL~~v~~~LP~dKP 75 (552)
-.+.+.+.-.+-|+.+.+.|++++.+-+.. .. ..+ -.. ....-.+++..+.+.++.+.|
T Consensus 166 ~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~-~~~~~~~~i~~v~~~~~~~ip 244 (311)
T 1jub_A 166 PPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAY-IKPTALANVRAFYTRLKPEIQ 244 (311)
T ss_dssp CCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGG-GHHHHHHHHHHHHTTSCTTSE
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCcccccc-ccHHHHHHHHHHHHhcCCCCC
Confidence 344455544556788888999998875432 00 000 000 022336788888888888888
Q ss_pred Eee-cCCCCHHHHHHHHHcCCccccChhHHHh
Q psy15335 76 RII-QGPWSPMNIVQFVQRGIDMFDSGLPLVL 106 (552)
Q Consensus 76 RyL-mGvG~P~dIl~aValGVDmFDcv~Ptr~ 106 (552)
... -||.+|+++.++++.|.|.+=...+..+
T Consensus 245 vi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 245 IIGTGGIETGQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp EEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEEchHHHh
Confidence 876 6777999999999999998755554443
No 66
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=55.66 E-value=21 Score=37.84 Aligned_cols=66 Identities=14% Similarity=0.114 Sum_probs=50.5
Q ss_pred HHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccCh
Q psy15335 27 CAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSG 101 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv 101 (552)
-++.+.+.+++++.|..-+ |. .....++|+++++.+| +.|...-++.++.+...+++.|+|.++..
T Consensus 259 ~a~~~~~aG~d~v~i~~~~--G~------~~~~~~~i~~i~~~~~-~~pvi~~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 259 RLDLLTQAGVDVIVLDSSQ--GN------SVYQIAMVHYIKQKYP-HLQVIGGNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHHTTCSEEEECCSC--CC------SHHHHHHHHHHHHHCT-TCEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHcCCCEEEeeccC--Cc------chhHHHHHHHHHHhCC-CCceEecccchHHHHHHHHHcCCCEEEEC
Confidence 4455677899999996433 22 2345678888888874 78876557899999999999999999874
No 67
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=55.47 E-value=17 Score=37.02 Aligned_cols=61 Identities=15% Similarity=0.145 Sum_probs=47.0
Q ss_pred cCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeec-----CCCCHHHHHHHHHcCCccccChh
Q psy15335 33 TRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQ-----GPWSPMNIVQFVQRGIDMFDSGL 102 (552)
Q Consensus 33 ~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLm-----GvG~P~dIl~aValGVDmFDcv~ 102 (552)
+.|.+.+.|....+ .+.++++.++|..+++.+| .|..+. |.+ ....+.|++.|+|.||++.
T Consensus 154 ~~G~~~i~l~Dt~G------~~~P~~~~~lv~~l~~~~~--~~i~~H~Hn~~G~a-~an~laA~~aGa~~vd~si 219 (320)
T 3dxi_A 154 DKIADLFCMVDSFG------GITPKEVKNLLKEVRKYTH--VPVGFHGHDNLQLG-LINSITAIDDGIDFIDATI 219 (320)
T ss_dssp TTTCSEEEEECTTS------CCCHHHHHHHHHHHHHHCC--SCEEEECBCTTSCH-HHHHHHHHHTTCSEEEEBG
T ss_pred hCCCCEEEECcccC------CCCHHHHHHHHHHHHHhCC--CeEEEEeCCCCccH-HHHHHHHHHhCCCEEEEec
Confidence 45788888876553 3468889999999998886 677764 433 5578889999999999987
No 68
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=55.16 E-value=12 Score=38.38 Aligned_cols=83 Identities=10% Similarity=-0.041 Sum_probs=59.6
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCC--HHHHH----H
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWS--PMNIV----Q 89 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~--P~dIl----~ 89 (552)
.|..+.+.=++-++.+.+.|++|+++.|.. ||.. .|+.+|..++++. ......| .+.|+|. ..+.+ .
T Consensus 41 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtT--GE~~-~Ls~eEr~~vi~~---~~~grvp-ViaGvg~~st~eai~la~~ 113 (344)
T 2hmc_A 41 DRTPDFDALVRKGKELIADGMSAVVYCGSM--GDWP-LLTDEQRMEGVER---LVKAGIP-VIVGTGAVNTASAVAHAVH 113 (344)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCCEEESSGG--GTGG-GSCHHHHHHHHHH---HHHTTCC-EEEECCCSSHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccC--cChh-hCCHHHHHHHHHH---HhCCCCc-EEEecCCCCHHHHHHHHHH
Confidence 488899988888898989999999999876 4653 3578899999987 2334556 4489986 33443 3
Q ss_pred HHHcCCccccChhHHH
Q psy15335 90 FVQRGIDMFDSGLPLV 105 (552)
Q Consensus 90 aValGVDmFDcv~Ptr 105 (552)
|.++|+|-+=.+.|+.
T Consensus 114 A~~~Gadavlv~~P~y 129 (344)
T 2hmc_A 114 AQKVGAKGLMVIPRVL 129 (344)
T ss_dssp HHHHTCSEEEECCCCS
T ss_pred HHhcCCCEEEECCCcc
Confidence 4567988665555543
No 69
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=52.88 E-value=64 Score=31.47 Aligned_cols=87 Identities=10% Similarity=0.086 Sum_probs=57.7
Q ss_pred EEeeccCCCHHHHHHHHHHHHcCCcc-eEEEccccCCC--CCccccChhHHHHHHHHhccCCCCCCcEee-cCCC-CHHH
Q psy15335 12 IAPIQGGLDLSLRRYCAELYATRDVH-GFLIDGLCADE--GATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPW-SPMN 86 (552)
Q Consensus 12 fGIVQGG~~~DLR~~SA~eL~~l~f~-GyaIGGl~v~G--E~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG-~P~d 86 (552)
+++--+|...+.-.++++.+.+.+++ ++-|.-.+++. ...-..+.+.+.++|+++++.. +.|..+ +..+ ++.+
T Consensus 96 ~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~--~~Pv~vKi~~~~~~~~ 173 (311)
T 1jub_A 96 IFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF--TKPLGVKLPPYFDLVH 173 (311)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC--CSCEEEEECCCCSHHH
T ss_pred EEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc--CCCEEEEECCCCCHHH
Confidence 33444567888888999999999999 89986433321 1100115677899999999876 688876 2222 5555
Q ss_pred H----HHHHHcCCccccC
Q psy15335 87 I----VQFVQRGIDMFDS 100 (552)
Q Consensus 87 I----l~aValGVDmFDc 100 (552)
+ -.+.+.|+|.+..
T Consensus 174 ~~~~a~~~~~~G~d~i~v 191 (311)
T 1jub_A 174 FDIMAEILNQFPLTYVNS 191 (311)
T ss_dssp HHHHHHHHTTSCCCEEEE
T ss_pred HHHHHHHHHHcCCcEEEe
Confidence 4 3455668887754
No 70
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=52.14 E-value=32 Score=34.06 Aligned_cols=78 Identities=19% Similarity=0.121 Sum_probs=51.5
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccChhHHHh
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSGLPLVL 106 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv~Ptr~ 106 (552)
++.+.+.+.+++.+.|....|..-.. .. .-.+++..+.+.+ +.|..+ -|+.+|.++..++++|.|.++...+...
T Consensus 131 a~~~~~~GaD~i~v~g~~~GG~~G~~-~~-~~~~~l~~v~~~~--~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~ 206 (328)
T 2gjl_A 131 ALKAERLGVDAVSIDGFECAGHPGED-DI-PGLVLLPAAANRL--RVPIIASGGFADGRGLVAALALGADAINMGTRFLA 206 (328)
T ss_dssp HHHHHHTTCSEEEEECTTCSBCCCSS-CC-CHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHHHcCCCEEEEECCCCCcCCCCc-cc-cHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHc
Confidence 34456688999999654321221000 00 1235556555554 678887 6688999999999999999999888776
Q ss_pred hcc
Q psy15335 107 ADR 109 (552)
Q Consensus 107 AR~ 109 (552)
+..
T Consensus 207 ~~e 209 (328)
T 2gjl_A 207 TRE 209 (328)
T ss_dssp SSS
T ss_pred Ccc
Confidence 543
No 71
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=51.92 E-value=35 Score=33.91 Aligned_cols=73 Identities=14% Similarity=0.098 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccc
Q psy15335 20 DLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 20 ~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmF 98 (552)
..+.|.+-+.+. ..+| -|.+....+-|... .+ ..++.++|..+++.. +.|..+ +||.+|+++-.++..|.|.+
T Consensus 161 t~~eri~~i~~~-~~gf-iY~vs~~GvTG~~~-~~-~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~~gADgv 234 (271)
T 3nav_A 161 ASDETLRAVAQL-GKGY-TYLLSRAGVTGAET-KA-NMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIEAGAAGA 234 (271)
T ss_dssp CCHHHHHHHHHH-CCSC-EEECCCC---------C-CHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHH-CCCe-EEEEeccCCCCccc-CC-chhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 345576666555 3456 34433222223321 12 456788888888876 689988 99999999999999999954
No 72
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=50.55 E-value=10 Score=34.69 Aligned_cols=85 Identities=13% Similarity=0.015 Sum_probs=55.2
Q ss_pred CCCCceEEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHH
Q psy15335 6 LKDTCVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPM 85 (552)
Q Consensus 6 Lk~q~LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~ 85 (552)
|++..+++++-+- +.+.=.+-++.+.+.|++.+.+.- +.+ ...+.|..+++.+|++++.-+--+-+|.
T Consensus 7 ~~~~~~i~~~~~~-~~~~~~~~~~~~~~~G~~~iev~~----~~~-------~~~~~i~~ir~~~~~~~~ig~~~v~~~~ 74 (205)
T 1wa3_A 7 FKKHKIVAVLRAN-SVEEAKEKALAVFEGGVHLIEITF----TVP-------DADTVIKELSFLKEKGAIIGAGTVTSVE 74 (205)
T ss_dssp HHHHCEEEEECCS-SHHHHHHHHHHHHHTTCCEEEEET----TST-------THHHHHHHTHHHHHTTCEEEEESCCSHH
T ss_pred HhhCCEEEEEecC-CHHHHHHHHHHHHHCCCCEEEEeC----CCh-------hHHHHHHHHHHHCCCCcEEEecccCCHH
Confidence 4556678787776 555555567778888999887641 111 1244566666666655542221246799
Q ss_pred HHHHHHHcCCccccChhHH
Q psy15335 86 NIVQFVQRGIDMFDSGLPL 104 (552)
Q Consensus 86 dIl~aValGVDmFDcv~Pt 104 (552)
++..+++.|+|.+ +.|.
T Consensus 75 ~~~~a~~~Gad~i--v~~~ 91 (205)
T 1wa3_A 75 QCRKAVESGAEFI--VSPH 91 (205)
T ss_dssp HHHHHHHHTCSEE--ECSS
T ss_pred HHHHHHHcCCCEE--EcCC
Confidence 9999999999988 5443
No 73
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=50.12 E-value=53 Score=33.25 Aligned_cols=86 Identities=14% Similarity=0.065 Sum_probs=58.8
Q ss_pred eEEeeccCCCHHHHHHHHHHHHcCCcceEEEccccC--------CCCCccccChhHHHHHHHHhccCCCCCCcEee---c
Q psy15335 11 VIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCA--------DEGATEDLGCDVVNAVLENTVPYLPNDKLRII---Q 79 (552)
Q Consensus 11 LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v--------~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL---m 79 (552)
.+++--+|.+++.-.++|+.+.+.||+++-|.+-++ .|... .-+.+.+.++|+++++.+ +.|..+ +
T Consensus 59 p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l-~~~~~~~~eiv~av~~~v--~~PV~vKiR~ 135 (350)
T 3b0p_A 59 PIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACL-LLDLARVREILKAMGEAV--RVPVTVKMRL 135 (350)
T ss_dssp SEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGG-GGCHHHHHHHHHHHHHHC--SSCEEEEEES
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhH-HhCHHHHHHHHHHHHHHh--CCceEEEEec
Confidence 344444566888889999999999999999874222 01111 124677888898888766 678777 6
Q ss_pred CCCCH-------HHHHHHHHcCCcccc
Q psy15335 80 GPWSP-------MNIVQFVQRGIDMFD 99 (552)
Q Consensus 80 GvG~P-------~dIl~aValGVDmFD 99 (552)
|+-.. ..+-.+.+.|+|.+.
T Consensus 136 g~~~~~~~~~~~~~a~~l~~aG~d~I~ 162 (350)
T 3b0p_A 136 GLEGKETYRGLAQSVEAMAEAGVKVFV 162 (350)
T ss_dssp CBTTCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CcCccccHHHHHHHHHHHHHcCCCEEE
Confidence 76532 233466789999987
No 74
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=49.41 E-value=19 Score=37.43 Aligned_cols=66 Identities=17% Similarity=0.108 Sum_probs=49.2
Q ss_pred HHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC-CCCHHHHHHHHHcCCccccC
Q psy15335 25 RYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG-PWSPMNIVQFVQRGIDMFDS 100 (552)
Q Consensus 25 ~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG-vG~P~dIl~aValGVDmFDc 100 (552)
.+-++.+.+.+++.+.|..-+. . .+.+.++|+++++..| +.|.. .| +.+|++...+++.|+|.+..
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~G--~------~~~~~e~I~~ir~~~~-~~~Vi-~G~V~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAHA--H------AKYVGKTLKSLRQLLG-SRCIM-AGNVATYAGADYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSCC--S------SHHHHHHHHHHHHHHT-TCEEE-EEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCC--C------cHhHHHHHHHHHHhcC-CCeEE-EcCcCCHHHHHHHHHcCCCEEEE
Confidence 4457778888999888864332 1 3445778888887765 56655 54 99999999999999998875
No 75
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=49.25 E-value=16 Score=35.79 Aligned_cols=56 Identities=11% Similarity=0.096 Sum_probs=37.9
Q ss_pred HHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccc
Q psy15335 25 RYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 25 ~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmF 98 (552)
.+-++.+.+.|.++++..++. .++++.+... ...++.|+.+|.++..|.++|.|.+
T Consensus 96 ~~~a~~Ai~AGA~fIvsP~~~--------------~~vi~~~~~~----gi~~ipGv~TptEi~~A~~~Gad~v 151 (232)
T 4e38_A 96 GEQALAAKEAGATFVVSPGFN--------------PNTVRACQEI----GIDIVPGVNNPSTVEAALEMGLTTL 151 (232)
T ss_dssp HHHHHHHHHHTCSEEECSSCC--------------HHHHHHHHHH----TCEEECEECSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCCEEEeCCCC--------------HHHHHHHHHc----CCCEEcCCCCHHHHHHHHHcCCCEE
Confidence 445555666677777654321 3344444442 3446689999999999999999987
No 76
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=47.60 E-value=63 Score=30.17 Aligned_cols=71 Identities=11% Similarity=0.038 Sum_probs=45.4
Q ss_pred HHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccChhH
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSGLP 103 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv~P 103 (552)
+-++++.+.+++.+.+-+....|... -.+ .+++..+.+.+ +.|... -|+.+|.++..+.+.|+|-+=....
T Consensus 155 e~~~~~~~~G~~~i~~~~~~~~g~~~-g~~----~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsa 226 (253)
T 1thf_D 155 DWVVEVEKRGAGEILLTSIDRDGTKS-GYD----TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASV 226 (253)
T ss_dssp HHHHHHHHTTCSEEEEEETTTTTSCS-CCC----HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHCCCCEEEEEeccCCCCCC-CCC----HHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCChHHHHHHH
Confidence 33555667889988875444322111 112 44555555544 678777 6799999999999999996544443
No 77
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=46.11 E-value=45 Score=32.23 Aligned_cols=76 Identities=12% Similarity=0.081 Sum_probs=46.9
Q ss_pred HHHHHHHcCCcceEEEccccCC----CCCc-c-------ccC----hhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHH
Q psy15335 26 YCAELYATRDVHGFLIDGLCAD----EGAT-E-------DLG----CDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIV 88 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~----GE~~-~-------~m~----~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl 88 (552)
+-++.+.+.|++++.+-|.... .... . -+. .....+++..+.+.+ +.|... -||.+|+++.
T Consensus 180 ~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~--~ipvia~GGI~~~~d~~ 257 (311)
T 1ep3_A 180 PIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV--DIPIIGMGGVANAQDVL 257 (311)
T ss_dssp HHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC--SSCEEECSSCCSHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHH
Confidence 3466777889999998432100 0000 0 011 112346677776665 678777 4577999999
Q ss_pred HHHHcCCccccChhH
Q psy15335 89 QFVQRGIDMFDSGLP 103 (552)
Q Consensus 89 ~aValGVDmFDcv~P 103 (552)
+++++|+|.+=...+
T Consensus 258 ~~l~~GAd~V~vg~~ 272 (311)
T 1ep3_A 258 EMYMAGASAVAVGTA 272 (311)
T ss_dssp HHHHHTCSEEEECTH
T ss_pred HHHHcCCCEEEECHH
Confidence 999999997644433
No 78
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=45.85 E-value=1.5e+02 Score=29.76 Aligned_cols=111 Identities=13% Similarity=0.127 Sum_probs=65.4
Q ss_pred cccCCCCceEEee--------ccCCCHHHH--HHHHHHHHcCCcceEEEccccCCCCCccccC-hhHHHHHHHHhccCCC
Q psy15335 3 RKALKDTCVIAPI--------QGGLDLSLR--RYCAELYATRDVHGFLIDGLCADEGATEDLG-CDVVNAVLENTVPYLP 71 (552)
Q Consensus 3 ~e~Lk~q~LfGIV--------QGG~~~DLR--~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~-~eem~~iL~~v~~~LP 71 (552)
++.|....++||+ -||.|.+.- .+-|+++.+-|.+-+=|||-+. .+..+..+ .||+.+++..+.....
T Consensus 1 s~sl~r~~iMGIlNvTPDSFsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeST-RPga~~vs~eeE~~Rv~pvi~~l~~ 79 (270)
T 4hb7_A 1 SNAMTKTKIMGILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVST-RPGHEMVTLEEELNRVLPVVEAIVG 79 (270)
T ss_dssp ----CCCEEEEEEECC----------CHHHHHHHHHHHHHHTTCSEEEEESCCC-STTCCCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCeEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccC-CCCCCCCchHHHHHHHHHHHHHhhc
Confidence 3567788889988 488665533 3456777788999999998774 22222233 4555555443332222
Q ss_pred CCCcEeecCCCCHHHHHHHHHcCCccccC--------hhHHHhhccCeEEee
Q psy15335 72 NDKLRIIQGPWSPMNIVQFVQRGIDMFDS--------GLPLVLADRGCAFTF 115 (552)
Q Consensus 72 ~dKPRyLmGvG~P~dIl~aValGVDmFDc--------v~Ptr~AR~G~aLTf 115 (552)
.+-|.- .=-.+|.-+-.|++.|+|++-. -+....|+.+..++-
T Consensus 80 ~~v~iS-IDT~~~~Va~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~vl 130 (270)
T 4hb7_A 80 FDVKIS-VDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIIL 130 (270)
T ss_dssp SSSEEE-EECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEEE
T ss_pred CCCeEE-EECCCHHHHHHHHHhccceeccccccccchhHHHHHHHcCCCeEE
Confidence 455544 4457899999999999997643 344556666665554
No 79
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=45.53 E-value=79 Score=30.14 Aligned_cols=84 Identities=17% Similarity=0.220 Sum_probs=53.2
Q ss_pred CceEEee-ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCc---------------cccChhHHHHHHHHhccCCCC
Q psy15335 9 TCVIAPI-QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGAT---------------EDLGCDVVNAVLENTVPYLPN 72 (552)
Q Consensus 9 q~LfGIV-QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~---------------~~m~~eem~~iL~~v~~~LP~ 72 (552)
..+...+ -|..+.+.-.+-++.+.+.|++.+=+|.... +|. .-++.+...+++..+++. .
T Consensus 18 ~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~--dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~--~ 93 (262)
T 1rd5_A 18 TAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCS--DPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE--L 93 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCS--CCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG--C
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCC--CcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--C
Confidence 3444444 4545555556678888899999999974221 110 012356678888888876 4
Q ss_pred CCcEeecCCCCHHH---HHHHHHcCCc
Q psy15335 73 DKLRIIQGPWSPMN---IVQFVQRGID 96 (552)
Q Consensus 73 dKPRyLmGvG~P~d---Il~aValGVD 96 (552)
+.|.++|+-..|.. +-.+.+.|+|
T Consensus 94 ~~Pv~~m~~~~~~~~~~~~~a~~aGad 120 (262)
T 1rd5_A 94 SCPVVLLSYYKPIMFRSLAKMKEAGVH 120 (262)
T ss_dssp SSCEEEECCSHHHHSCCTHHHHHTTCC
T ss_pred CCCEEEEecCcHHHHHHHHHHHHcCCC
Confidence 78999997556532 2236777775
No 80
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=45.00 E-value=51 Score=32.87 Aligned_cols=75 Identities=12% Similarity=0.076 Sum_probs=49.1
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccChhHHHh
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSGLPLVL 106 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv~Ptr~ 106 (552)
++.+.+.+++++.+.|....|-.-... ..+++..+.+.+ +.|..+ =|+.+|.++..++++|.|.++...+...
T Consensus 123 a~~~~~~GaD~i~v~g~~~GG~~g~~~----~~~ll~~i~~~~--~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~ 196 (332)
T 2z6i_A 123 AKRMEKIGADAVIAEGMEAGGHIGKLT----TMTLVRQVATAI--SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVV 196 (332)
T ss_dssp HHHHHHTTCSCEEEECTTSSEECCSSC----HHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHT
T ss_pred HHHHHHcCCCEEEEECCCCCCCCCCcc----HHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhc
Confidence 556677899999995542211100011 124444444333 578777 5677899999999999999999888776
Q ss_pred hc
Q psy15335 107 AD 108 (552)
Q Consensus 107 AR 108 (552)
+.
T Consensus 197 ~~ 198 (332)
T 2z6i_A 197 AK 198 (332)
T ss_dssp BT
T ss_pred Cc
Confidence 64
No 81
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=44.44 E-value=62 Score=32.09 Aligned_cols=91 Identities=13% Similarity=0.043 Sum_probs=58.1
Q ss_pred eccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCC---------ccccC----hhHHHHHHHHhccCCCCCCcEeec-C
Q psy15335 15 IQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGA---------TEDLG----CDVVNAVLENTVPYLPNDKLRIIQ-G 80 (552)
Q Consensus 15 VQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~---------~~~m~----~eem~~iL~~v~~~LP~dKPRyLm-G 80 (552)
+-++...+.-.+-|+.+.+.|++++.+.+-...-+. ..-+. ...-.+++..+.+.++.+.|.... |
T Consensus 218 i~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GG 297 (336)
T 1f76_A 218 IAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGG 297 (336)
T ss_dssp CCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESS
T ss_pred ecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 444555444456678888999999998653210000 00011 122346677777777777887764 6
Q ss_pred CCCHHHHHHHHHcCCccccChhHHH
Q psy15335 81 PWSPMNIVQFVQRGIDMFDSGLPLV 105 (552)
Q Consensus 81 vG~P~dIl~aValGVDmFDcv~Ptr 105 (552)
|-+|.++.++++.|.|++=...+..
T Consensus 298 I~~~~da~~~l~~GAd~V~igr~~l 322 (336)
T 1f76_A 298 IDSVIAAREKIAAGASLVQIYSGFI 322 (336)
T ss_dssp CCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred CCCHHHHHHHHHCCCCEEEeeHHHH
Confidence 7899999999999999875554443
No 82
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=43.91 E-value=34 Score=34.89 Aligned_cols=79 Identities=13% Similarity=0.094 Sum_probs=51.1
Q ss_pred EEeeccCCCHHHHHHHHHHHHcC--CcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHH
Q psy15335 12 IAPIQGGLDLSLRRYCAELYATR--DVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQ 89 (552)
Q Consensus 12 fGIVQGG~~~DLR~~SA~eL~~l--~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~ 89 (552)
+++.+|. ..+..++ ++.+.+. +++.+.|-... | +...+.+.|+++++..| +.|..+=++.++++...
T Consensus 109 v~~~~g~-~~~~~~~-~~~l~~~~~g~~~i~i~~~~--g------~~~~~~~~i~~lr~~~~-~~~vi~g~v~t~e~A~~ 177 (351)
T 2c6q_A 109 LAASSGT-GSSDFEQ-LEQILEAIPQVKYICLDVAN--G------YSEHFVEFVKDVRKRFP-QHTIMAGNVVTGEMVEE 177 (351)
T ss_dssp EEEEECS-SHHHHHH-HHHHHHHCTTCCEEEEECSC--T------TBHHHHHHHHHHHHHCT-TSEEEEEEECSHHHHHH
T ss_pred eEeecCC-ChHHHHH-HHHHHhccCCCCEEEEEecC--C------CcHHHHHHHHHHHHhcC-CCeEEEEeCCCHHHHHH
Confidence 4555554 3333333 3334443 67766664211 2 23456788888888776 67777656889999999
Q ss_pred HHHcCCccccCh
Q psy15335 90 FVQRGIDMFDSG 101 (552)
Q Consensus 90 aValGVDmFDcv 101 (552)
+++.|+|.++.+
T Consensus 178 a~~aGaD~I~v~ 189 (351)
T 2c6q_A 178 LILSGADIIKVG 189 (351)
T ss_dssp HHHTTCSEEEEC
T ss_pred HHHhCCCEEEEC
Confidence 999999998763
No 83
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=43.64 E-value=60 Score=31.32 Aligned_cols=90 Identities=10% Similarity=-0.002 Sum_probs=59.7
Q ss_pred ceEEeeccCCCHHHHHHHHHHHHc-CCcceEEEccccCCC--CCccc-cChhHHHHHHHHhccCCCCCCcEee---cCCC
Q psy15335 10 CVIAPIQGGLDLSLRRYCAELYAT-RDVHGFLIDGLCADE--GATED-LGCDVVNAVLENTVPYLPNDKLRII---QGPW 82 (552)
Q Consensus 10 ~LfGIVQGG~~~DLR~~SA~eL~~-l~f~GyaIGGl~v~G--E~~~~-m~~eem~~iL~~v~~~LP~dKPRyL---mGvG 82 (552)
..+++--+|...+.-.++++.+.+ .+++++-|.-.+++- ..... .+.+.+.++|+++++.+ +.|..+ .++.
T Consensus 99 ~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~--~~pv~vk~~~~~~ 176 (311)
T 1ep3_A 99 LPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS--KVPLYVKLSPNVT 176 (311)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC--SSCEEEEECSCSS
T ss_pred CcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc--CCCEEEEECCChH
Confidence 456666666678888889998887 899999886322210 00001 14566788888887766 577665 3666
Q ss_pred CHHH-HHHHHHcCCccccCh
Q psy15335 83 SPMN-IVQFVQRGIDMFDSG 101 (552)
Q Consensus 83 ~P~d-Il~aValGVDmFDcv 101 (552)
++.+ +..+.+.|+|.+..+
T Consensus 177 ~~~~~a~~l~~~G~d~i~v~ 196 (311)
T 1ep3_A 177 DIVPIAKAVEAAGADGLTMI 196 (311)
T ss_dssp CSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEe
Confidence 7666 456778999977764
No 84
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=43.35 E-value=39 Score=33.39 Aligned_cols=61 Identities=18% Similarity=0.241 Sum_probs=41.0
Q ss_pred cCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccC
Q psy15335 33 TRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDS 100 (552)
Q Consensus 33 ~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDc 100 (552)
+.|++.+.+.+-.. . +...+.+ .+..+.+.+|.+.|... .|+.+|+++..+.+.|+|-|=.
T Consensus 180 ~~Gad~IGv~~r~l--~-~~~~dl~----~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlV 241 (272)
T 3qja_A 180 KAGAKVIGVNARDL--M-TLDVDRD----CFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLV 241 (272)
T ss_dssp HHTCSEEEEESBCT--T-TCCBCTT----HHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HCCCCEEEECCCcc--c-ccccCHH----HHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 45788888875321 1 1111223 34455567788888765 8888999999999999996543
No 85
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=42.99 E-value=52 Score=32.87 Aligned_cols=76 Identities=11% Similarity=0.090 Sum_probs=48.3
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccChhHHHh
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSGLPLVL 106 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv~Ptr~ 106 (552)
++.+.+.+++++.+-|....|-.-...+ .+++..+.+.+ +.|..+ =|+.+|.++..++++|.|.++...+...
T Consensus 137 a~~a~~~GaD~i~v~g~~~GG~~G~~~~----~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~ 210 (326)
T 3bo9_A 137 ARMVERAGADAVIAEGMESGGHIGEVTT----FVLVNKVSRSV--NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVA 210 (326)
T ss_dssp HHHHHHTTCSCEEEECTTSSEECCSSCH----HHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHHHcCCCEEEEECCCCCccCCCccH----HHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHc
Confidence 4456678999999944221111001111 23333333333 578777 4577899999999999999999988776
Q ss_pred hcc
Q psy15335 107 ADR 109 (552)
Q Consensus 107 AR~ 109 (552)
+..
T Consensus 211 ~~e 213 (326)
T 3bo9_A 211 SVE 213 (326)
T ss_dssp BSS
T ss_pred Ccc
Confidence 644
No 86
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=42.59 E-value=93 Score=28.43 Aligned_cols=82 Identities=13% Similarity=0.089 Sum_probs=54.5
Q ss_pred eeccCCCHHHH-----HHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHH
Q psy15335 14 PIQGGLDLSLR-----RYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNI 87 (552)
Q Consensus 14 IVQGG~~~DLR-----~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dI 87 (552)
+|||-....++ .+-++.+.+.|++.+.+-.....+ .......+++..+++.. +.|..+ -|+.+|.++
T Consensus 20 ~v~g~~~~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~-----~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~ 92 (253)
T 1h5y_A 20 VVKGVNFQGIREVGDPVEMAVRYEEEGADEIAILDITAAP-----EGRATFIDSVKRVAEAV--SIPVLVGGGVRSLEDA 92 (253)
T ss_dssp ECTTCCCHHHHEEECHHHHHHHHHHTTCSCEEEEECCCCT-----TTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHHH
T ss_pred EEEcccccceeecccHHHHHHHHHHcCCCEEEEEeCCccc-----cCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHH
Confidence 45776665444 345677778899988876443211 12334456666666654 577776 557889999
Q ss_pred HHHHHcCCccccChh
Q psy15335 88 VQFVQRGIDMFDSGL 102 (552)
Q Consensus 88 l~aValGVDmFDcv~ 102 (552)
..+++.|+|.+....
T Consensus 93 ~~~~~~Gad~V~i~~ 107 (253)
T 1h5y_A 93 TTLFRAGADKVSVNT 107 (253)
T ss_dssp HHHHHHTCSEEEESH
T ss_pred HHHHHcCCCEEEECh
Confidence 999999999887543
No 87
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=41.91 E-value=33 Score=34.71 Aligned_cols=76 Identities=13% Similarity=0.157 Sum_probs=50.3
Q ss_pred HHHHHHHHcCCcceEEEcccc---------C--------CCCCccccChhHHHHHHHHhccCCCCCCcEee-cCC-----
Q psy15335 25 RYCAELYATRDVHGFLIDGLC---------A--------DEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGP----- 81 (552)
Q Consensus 25 ~~SA~eL~~l~f~GyaIGGl~---------v--------~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGv----- 81 (552)
.++|+.+.+.||+|+=|=+-+ + .|.+.+. ...-+.++|+++++.+++++|.-+ +..
T Consensus 155 ~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslen-R~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~ 233 (349)
T 3hgj_A 155 VEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLEN-RMRFPLQVAQAVREVVPRELPLFVRVSATDWGE 233 (349)
T ss_dssp HHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHH-HHHHHHHHHHHHHHHSCTTSCEEEEEESCCCST
T ss_pred HHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHH-HHHHHHHHHHHHHHHhcCCceEEEEeccccccC
Confidence 457777888999999886544 1 1112111 134568999999999999999776 332
Q ss_pred --CCHHHHH----HHHHcCCccccCh
Q psy15335 82 --WSPMNIV----QFVQRGIDMFDSG 101 (552)
Q Consensus 82 --G~P~dIl----~aValGVDmFDcv 101 (552)
.++.+.+ .+.++|+|.++.+
T Consensus 234 ~g~~~~~~~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 234 GGWSLEDTLAFARRLKELGVDLLDCS 259 (349)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 3555533 3456799988865
No 88
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=41.81 E-value=40 Score=34.06 Aligned_cols=79 Identities=13% Similarity=0.112 Sum_probs=49.7
Q ss_pred HHHHHcCCcceEEEccc----cCCCCCccccCh----hHHHHHHHHhccCCCCCCcEeecC-CCCHHHHHHHHHcCCccc
Q psy15335 28 AELYATRDVHGFLIDGL----CADEGATEDLGC----DVVNAVLENTVPYLPNDKLRIIQG-PWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl----~v~GE~~~~m~~----eem~~iL~~v~~~LP~dKPRyLmG-vG~P~dIl~aValGVDmF 98 (552)
++.+.+.+++++.+-|. +. |........ ....+++..+.+.+ +.|..+-| +.+|.++..++++|.|.+
T Consensus 158 a~~a~~~GaD~i~v~g~~~GGh~-g~~~~~~~~~~~~~~~~~~l~~i~~~~--~iPViaaGGI~~~~~~~~~l~~GAd~V 234 (369)
T 3bw2_A 158 ARAVEAAGADAVIAQGVEAGGHQ-GTHRDSSEDDGAGIGLLSLLAQVREAV--DIPVVAAGGIMRGGQIAAVLAAGADAA 234 (369)
T ss_dssp HHHHHHTTCSEEEEECTTCSEEC-CCSSCCGGGTTCCCCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHcCCCEEEEeCCCcCCcC-CCcccccccccccccHHHHHHHHHHhc--CceEEEECCCCCHHHHHHHHHcCCCEE
Confidence 44566789999999322 11 111110000 11244555554433 67888765 669999999999999999
Q ss_pred cChhHHHhhcc
Q psy15335 99 DSGLPLVLADR 109 (552)
Q Consensus 99 Dcv~Ptr~AR~ 109 (552)
+...+...+.+
T Consensus 235 ~vGs~~~~~~e 245 (369)
T 3bw2_A 235 QLGTAFLATDE 245 (369)
T ss_dssp EESHHHHTSTT
T ss_pred EEChHHhCCcc
Confidence 99888776644
No 89
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=41.32 E-value=42 Score=34.72 Aligned_cols=77 Identities=16% Similarity=0.185 Sum_probs=50.2
Q ss_pred HHHHHHHcCCcceEEEccccCCCCCccccCh-hHHHHHHHHhccCCCCCCcEeec-CCCCHHHHHHHHHcCCccccChhH
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGATEDLGC-DVVNAVLENTVPYLPNDKLRIIQ-GPWSPMNIVQFVQRGIDMFDSGLP 103 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~-eem~~iL~~v~~~LP~dKPRyLm-GvG~P~dIl~aValGVDmFDcv~P 103 (552)
+-|+.+.+.|++|+.+.|-. |-. ++. ..-.++|..+.+.+..+-|.+.- ||-++.+++.++++|.|.+=...|
T Consensus 229 e~A~~a~~~GaD~I~vsn~G--G~~---~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~ 303 (352)
T 3sgz_A 229 EDAELAMKHNVQGIVVSNHG--GRQ---LDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRP 303 (352)
T ss_dssp HHHHHHHHTTCSEEEECCGG--GTS---SCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHcCCCEEEEeCCC--CCc---cCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 44777888999999996532 110 110 01123333333334456777774 788999999999999998877777
Q ss_pred HHhh
Q psy15335 104 LVLA 107 (552)
Q Consensus 104 tr~A 107 (552)
..++
T Consensus 304 ~l~~ 307 (352)
T 3sgz_A 304 ILWG 307 (352)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 90
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=40.80 E-value=41 Score=34.58 Aligned_cols=77 Identities=13% Similarity=0.148 Sum_probs=52.3
Q ss_pred HHHHHHHcCCcceEEEccccCCCCCccccC-hhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccChhH
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGATEDLG-CDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSGLP 103 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~-~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv~P 103 (552)
+-|+.+.+.|++++.+.|-. |.. ++ ..--.++|..+.+.++.+.|.+. =||-++.+++.++++|.|.+=...|
T Consensus 241 e~a~~a~~~Gad~I~vs~~g--gr~---~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~ 315 (368)
T 2nli_A 241 EDADMAIKRGASGIWVSNHG--ARQ---LYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRP 315 (368)
T ss_dssp HHHHHHHHTTCSEEEECCGG--GTS---CSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEEcCCC--cCC---CCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 44677778999999996522 111 11 00112444444445566678877 5678999999999999998888888
Q ss_pred HHhh
Q psy15335 104 LVLA 107 (552)
Q Consensus 104 tr~A 107 (552)
..++
T Consensus 316 ~l~~ 319 (368)
T 2nli_A 316 VLFG 319 (368)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 91
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=40.62 E-value=85 Score=28.70 Aligned_cols=70 Identities=11% Similarity=0.072 Sum_probs=44.2
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccChhHH
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSGLPL 104 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv~Pt 104 (552)
++.+.+.+++.+.+.+....|.. ...+.+.+.++.+ .+ +.|... -|+.++.++..+.+.|+|.+=.....
T Consensus 160 ~~~~~~~G~d~i~~~~~~~~g~~-~~~~~~~i~~l~~----~~--~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal 230 (253)
T 1h5y_A 160 AKEVEELGAGEILLTSIDRDGTG-LGYDVELIRRVAD----SV--RIPVIASGGAGRVEHFYEAAAAGADAVLAASLF 230 (253)
T ss_dssp HHHHHHHTCSEEEEEETTTTTTC-SCCCHHHHHHHHH----HC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHhCCCCEEEEecccCCCCc-CcCCHHHHHHHHH----hc--CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHH
Confidence 56667778899888765532211 1112333333333 22 567776 67888999999999999976555444
No 92
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=40.01 E-value=61 Score=33.26 Aligned_cols=66 Identities=12% Similarity=0.072 Sum_probs=47.6
Q ss_pred HHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccC
Q psy15335 25 RYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDS 100 (552)
Q Consensus 25 ~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDc 100 (552)
.+-++.+.+.+++.+.|..-+ | +.+.+.++|.++++.+ +.|..+=++.++.+...+++.|+|.+..
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~--G------~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAH--G------HSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKELIENGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSC--C------SBHHHHHHHHHHHHHC--CCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCC--C------CcHHHHHHHHHHHHhc--CCcEEEccCCCHHHHHHHHHcCcCEEEE
Confidence 444566667788888876322 2 2455677788777766 5676655788999999999999998874
No 93
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=38.76 E-value=54 Score=33.78 Aligned_cols=91 Identities=14% Similarity=0.131 Sum_probs=58.7
Q ss_pred eccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCC---------ccccC----hhHHHHHHHHhccCCCCCCcEeec-C
Q psy15335 15 IQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGA---------TEDLG----CDVVNAVLENTVPYLPNDKLRIIQ-G 80 (552)
Q Consensus 15 VQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~---------~~~m~----~eem~~iL~~v~~~LP~dKPRyLm-G 80 (552)
+--+...+.-.+-|+.+.+.|++|+.+-+-...... ..-+. +..-.++|..+.+.++.+.|.... |
T Consensus 227 i~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GG 306 (367)
T 3zwt_A 227 IAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGG 306 (367)
T ss_dssp ECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESS
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECC
Confidence 333444444566777788889999986532210000 00011 223457788888888888888874 6
Q ss_pred CCCHHHHHHHHHcCCccccChhHHH
Q psy15335 81 PWSPMNIVQFVQRGIDMFDSGLPLV 105 (552)
Q Consensus 81 vG~P~dIl~aValGVDmFDcv~Ptr 105 (552)
|.+++++.++++.|.|.+=...+..
T Consensus 307 I~s~~da~~~l~~GAd~V~vgra~l 331 (367)
T 3zwt_A 307 VSSGQDALEKIRAGASLVQLYTALT 331 (367)
T ss_dssp CCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEECHHHH
Confidence 7799999999999999776555543
No 94
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=38.68 E-value=97 Score=30.66 Aligned_cols=90 Identities=12% Similarity=-0.043 Sum_probs=56.6
Q ss_pred eEEeeccCCC-------HHHHHHHHHHHHcCCcceEEEccccCCCCCcc-ccChhHHHHHHHHhccCC-------CCCCc
Q psy15335 11 VIAPIQGGLD-------LSLRRYCAELYATRDVHGFLIDGLCADEGATE-DLGCDVVNAVLENTVPYL-------PNDKL 75 (552)
Q Consensus 11 LfGIVQGG~~-------~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~-~m~~eem~~iL~~v~~~L-------P~dKP 75 (552)
.+++--|+.. .+.-.++++.+.+ +++++-|-..+++..... ..+.+.+.++|+++++.. .++.|
T Consensus 135 ~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~P 213 (336)
T 1f76_A 135 VLGINIGKNKDTPVEQGKDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVP 213 (336)
T ss_dssp EEEEEECCCTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred cEEEEecCCCCCcccccHHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCc
Confidence 4555555544 6667778888876 899998865444211011 113566778888887766 35788
Q ss_pred Eee-cCCC-CHHH----HHHHHHcCCccccCh
Q psy15335 76 RII-QGPW-SPMN----IVQFVQRGIDMFDSG 101 (552)
Q Consensus 76 RyL-mGvG-~P~d----Il~aValGVDmFDcv 101 (552)
..+ +..+ +.++ .-.+.+.|||.++.+
T Consensus 214 v~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vs 245 (336)
T 1f76_A 214 IAVKIAPDLSEEELIQVADSLVRHNIDGVIAT 245 (336)
T ss_dssp EEEECCSCCCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred eEEEecCCCCHHHHHHHHHHHHHcCCcEEEEe
Confidence 876 4433 3334 356678899988866
No 95
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=38.60 E-value=1.1e+02 Score=29.75 Aligned_cols=71 Identities=11% Similarity=0.121 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccc
Q psy15335 20 DLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 20 ~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmF 98 (552)
..+.-.+.++++.+.++..+.|.| ||+ +.++.+.+.++++.+.+. +....+ .|.-+++.+-.+.+.|+|.+
T Consensus 85 s~eei~~~i~~~~~~g~~~i~~~g----Ge~-p~~~~~~~~~li~~i~~~---~~~i~~s~g~l~~e~l~~L~~ag~~~v 156 (348)
T 3iix_A 85 TPEEIVERARLAVQFGAKTIVLQS----GED-PYXMPDVISDIVKEIKKM---GVAVTLSLGEWPREYYEKWKEAGADRY 156 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEE----SCC-GGGTTHHHHHHHHHHHTT---SCEEEEECCCCCHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEe----CCC-CCccHHHHHHHHHHHHhc---CceEEEecCCCCHHHHHHHHHhCCCEE
Confidence 566667777888889999999874 562 234568889999988876 333333 56678999999999999854
No 96
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=38.38 E-value=95 Score=28.94 Aligned_cols=67 Identities=10% Similarity=-0.014 Sum_probs=41.3
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccCh
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSG 101 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv 101 (552)
++++.+.|++++.+-+....|.... .+ .+++..+.+.+ +.|.+. .|+.+|+++..+.+.|+|-+=..
T Consensus 158 ~~~~~~~G~~~i~~~~~~~~g~~~g-~~----~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 158 AVKGVELGAGEILLTSMDRDGTKEG-YD----LRLTRMVAEAV--GVPVIASGGAGRMEHFLEAFQAGAEAALAA 225 (252)
T ss_dssp HHHHHHHTCCEEEEEETTTTTTCSC-CC----HHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHcCCCEEEEecccCCCCcCC-CC----HHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHCCCHHHHHH
Confidence 4445567888888765443222111 12 33333333333 567776 78999999999999999955333
No 97
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=37.89 E-value=58 Score=32.68 Aligned_cols=75 Identities=11% Similarity=-0.096 Sum_probs=48.4
Q ss_pred HHHHHHHcCCcceEEEccccCCCCCccccChhH--------HHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCc
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGATEDLGCDV--------VNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGID 96 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~ee--------m~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVD 96 (552)
+-|+.+.+.|++++.+++-. |-. .....+ -.+.|.++.+.+ +.|.+. =||.++.+++.+.++|.|
T Consensus 161 e~A~~a~~aGad~Ivvs~hg--G~~--~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv~kalalGAd 234 (336)
T 1ypf_A 161 EAVRELENAGADATKVGIGP--GKV--CITKIKTGFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDVAKSIRFGAT 234 (336)
T ss_dssp HHHHHHHHHTCSEEEECSSC--STT--CHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEecCC--Cce--eecccccCcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHHHcCCC
Confidence 46777888999999995421 110 000000 244555555554 667664 289999999999999999
Q ss_pred cccChhHHHh
Q psy15335 97 MFDSGLPLVL 106 (552)
Q Consensus 97 mFDcv~Ptr~ 106 (552)
..=...+...
T Consensus 235 aV~iGr~~l~ 244 (336)
T 1ypf_A 235 MVMIGSLFAG 244 (336)
T ss_dssp EEEESGGGTT
T ss_pred EEEeChhhhc
Confidence 7766666553
No 98
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=37.88 E-value=50 Score=30.70 Aligned_cols=67 Identities=12% Similarity=0.078 Sum_probs=47.6
Q ss_pred HHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCcccc
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFD 99 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFD 99 (552)
+-++++.+.|++.+.++.... ..+ +.+.+.++++.+++..| +++ .+.++.++.+...+...|+|++.
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~-~~~----~~~~~~~~i~~i~~~~~-~~~-v~~~~~t~~ea~~a~~~Gad~i~ 158 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTKR-DRH----DGLDIASFIRQVKEKYP-NQL-LMADISTFDEGLVAHQAGIDFVG 158 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCSS-CCT----TCCCHHHHHHHHHHHCT-TCE-EEEECSSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEccccc-CCC----CCccHHHHHHHHHHhCC-CCe-EEEeCCCHHHHHHHHHcCCCEEe
Confidence 446777889999999986542 111 01234677777777664 555 45689999999999999999873
No 99
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=37.38 E-value=49 Score=32.37 Aligned_cols=88 Identities=7% Similarity=0.011 Sum_probs=56.1
Q ss_pred eEEeeccCCCHHHHHHHHHHHHcCCcc---eEEEccccCCCCCc-ccc-ChhHHHHHHHHhccCCCCCCcEee-cCC-CC
Q psy15335 11 VIAPIQGGLDLSLRRYCAELYATRDVH---GFLIDGLCADEGAT-EDL-GCDVVNAVLENTVPYLPNDKLRII-QGP-WS 83 (552)
Q Consensus 11 LfGIVQGG~~~DLR~~SA~eL~~l~f~---GyaIGGl~v~GE~~-~~m-~~eem~~iL~~v~~~LP~dKPRyL-mGv-G~ 83 (552)
.+++.-+|...+.-.++++.+.+.+++ ++-|.-.+++.+.. ... +.+.+.++|+++++.+ +.|..+ +.. .+
T Consensus 95 p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~--~~Pv~vK~~~~~~ 172 (314)
T 2e6f_A 95 PLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY--GLPFGVKMPPYFD 172 (314)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH--CSCEEEEECCCCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc--CCCEEEEECCCCC
Confidence 344445667888888899999988999 78886433321100 111 4667788888887765 578776 222 25
Q ss_pred HHHH----HHHHHcC-CccccC
Q psy15335 84 PMNI----VQFVQRG-IDMFDS 100 (552)
Q Consensus 84 P~dI----l~aValG-VDmFDc 100 (552)
+.++ -.+.+.| +|.+..
T Consensus 173 ~~~~~~~a~~~~~aG~~d~i~v 194 (314)
T 2e6f_A 173 IAHFDTAAAVLNEFPLVKFVTC 194 (314)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHHHHHhcCCceEEEE
Confidence 5564 3445778 887763
No 100
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=37.26 E-value=1e+02 Score=29.04 Aligned_cols=66 Identities=12% Similarity=0.072 Sum_probs=41.8
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccC
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDS 100 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDc 100 (552)
++.+.+.+++.+.+-+....|.... .+ .+++..+.+.+ +.|... .|+.+|.++..+.+.|+|-+=.
T Consensus 162 ~~~~~~~G~~~i~~t~~~~~g~~~g-~~----~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~~Gadgv~v 228 (266)
T 2w6r_A 162 VVEVEKRGAGEILLTSIDRDGTKSG-YD----TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALA 228 (266)
T ss_dssp HHHHHHTTCSEEEEEETTTTTTCSC-CC----HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHcCCCEEEEEeecCCCCcCC-CC----HHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHcCCHHHHc
Confidence 3445567888777644332221111 12 44555555554 578777 7899999999999999995433
No 101
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=37.24 E-value=57 Score=34.22 Aligned_cols=77 Identities=12% Similarity=0.065 Sum_probs=54.2
Q ss_pred ceEEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHH
Q psy15335 10 CVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQ 89 (552)
Q Consensus 10 ~LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~ 89 (552)
..+++..|-.. .+-++.+.+.+++-++|+.-+ | ..+.+.++|.++++.+ +.|..+-++.++.+...
T Consensus 135 l~v~~~v~~~~----~e~~~~lveaGvdvIvldta~--G------~~~~~~e~I~~ik~~~--~i~Vi~g~V~t~e~A~~ 200 (400)
T 3ffs_A 135 LRVGAAIGVNE----IERAKLLVEAGVDVIVLDSAH--G------HSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKE 200 (400)
T ss_dssp BCCEEEECCC-----CHHHHHHHHHTCSEEEECCSC--C------SBHHHHHHHHHHHTTC--CCEEEEEEECSHHHHHH
T ss_pred eeEEeecCCCH----HHHHHHHHHcCCCEEEEeCCC--C------CcccHHHHHHHHHhcC--CCeEEEeecCCHHHHHH
Confidence 34555555433 455777778899999886333 2 2455678888888776 56655447899999999
Q ss_pred HHHcCCccccC
Q psy15335 90 FVQRGIDMFDS 100 (552)
Q Consensus 90 aValGVDmFDc 100 (552)
+++.|+|.+-.
T Consensus 201 a~~aGAD~I~v 211 (400)
T 3ffs_A 201 LIENGADGIKV 211 (400)
T ss_dssp HHHTTCSEEEE
T ss_pred HHHcCCCEEEE
Confidence 99999998764
No 102
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=36.50 E-value=81 Score=30.55 Aligned_cols=84 Identities=7% Similarity=-0.097 Sum_probs=55.9
Q ss_pred CCceEEeeccCC-CHHHHHHHHHHHHcCCcceEEEccccCCCCCccccCh-----------------hHHHHHHHHhccC
Q psy15335 8 DTCVIAPIQGGL-DLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGC-----------------DVVNAVLENTVPY 69 (552)
Q Consensus 8 ~q~LfGIVQGG~-~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~-----------------eem~~iL~~v~~~ 69 (552)
+..+.+.|--|. +.+.-.+-++.|.+.|++.+=||-.. .+| .++. ..+.++|..+++.
T Consensus 16 ~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~--sdp--~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~ 91 (268)
T 1qop_A 16 EGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPF--SDP--LADGPTIQNANLRAFAAGVTPAQCFEMLAIIREK 91 (268)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCC--SCC--TTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCC--CCc--cCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 456666666553 34656677888999999999998533 122 2221 3345777777765
Q ss_pred CCCCCcEeecCCCCH-------HHHHHHHHcCCc
Q psy15335 70 LPNDKLRIIQGPWSP-------MNIVQFVQRGID 96 (552)
Q Consensus 70 LP~dKPRyLmGvG~P-------~dIl~aValGVD 96 (552)
.+ +.|.++|+-..| .++-.+.+.|+|
T Consensus 92 ~~-~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGad 124 (268)
T 1qop_A 92 HP-TIPIGLLMYANLVFNNGIDAFYARCEQVGVD 124 (268)
T ss_dssp CS-SSCEEEEECHHHHHTTCHHHHHHHHHHHTCC
T ss_pred CC-CCCEEEEEcccHHHHhhHHHHHHHHHHcCCC
Confidence 22 578999875555 667778899998
No 103
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=35.83 E-value=65 Score=33.29 Aligned_cols=86 Identities=8% Similarity=-0.066 Sum_probs=56.4
Q ss_pred CCCceEEeeccCCCHHHHHHHHHHHHcCCcceEEEcccc------CCCCCccccChhHHHHHHHHhccCCCCCCcEeecC
Q psy15335 7 KDTCVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLC------ADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG 80 (552)
Q Consensus 7 k~q~LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~------v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG 80 (552)
++..+++-|-.+...+ +..+.+...+.+.+.|---. +.|+. +.+.+.+.|+++++.+ ++|..+=+
T Consensus 143 P~~~~ianig~~~~~e---~~~~~ve~~~adal~ihln~~qe~~~p~Gd~----~~~~~~~~I~~l~~~~--~~PVivK~ 213 (365)
T 3sr7_A 143 PHLLLATNIGLDKPYQ---AGLQAVRDLQPLFLQVHINLMQELLMPEGER----EFRSWKKHLSDYAKKL--QLPFILKE 213 (365)
T ss_dssp --CCEEEEEETTSCHH---HHHHHHHHHCCSCEEEEECHHHHHTSSSSCC----CCHHHHHHHHHHHHHC--CSCEEEEE
T ss_pred CCCcEEEEeCCCCCHH---HHHHHHHhcCCCEEEEeccccccccCCCCCC----cHHHHHHHHHHHHHhh--CCCEEEEE
Confidence 3455666665554444 34444445577777765211 11221 3456778888888876 68998876
Q ss_pred C---CCHHHHHHHHHcCCccccCh
Q psy15335 81 P---WSPMNIVQFVQRGIDMFDSG 101 (552)
Q Consensus 81 v---G~P~dIl~aValGVDmFDcv 101 (552)
+ .+|.+...+++.|+|.++..
T Consensus 214 vg~g~s~e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 214 VGFGMDVKTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp CSSCCCHHHHHHHHHHTCCEEECC
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEe
Confidence 7 48999999999999999863
No 104
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=35.51 E-value=81 Score=31.15 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=33.8
Q ss_pred hHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccC
Q psy15335 57 DVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDS 100 (552)
Q Consensus 57 eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDc 100 (552)
.++.++|..+++.. +.|..+ +||.+|+++-.++..|.|.+=.
T Consensus 192 ~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~~gADgvVV 234 (267)
T 3vnd_A 192 EPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIKAGAAGAIS 234 (267)
T ss_dssp -CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 45778888888775 689887 8888999999999999996543
No 105
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=34.90 E-value=70 Score=33.19 Aligned_cols=78 Identities=15% Similarity=0.160 Sum_probs=52.1
Q ss_pred HHHHHHHHcCCcceEEEccccCCCCCccccC-hhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccChh
Q psy15335 25 RYCAELYATRDVHGFLIDGLCADEGATEDLG-CDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSGL 102 (552)
Q Consensus 25 ~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~-~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv~ 102 (552)
.+-|+.+.+.|++++.+.|-. |.. ++ ...-.+.|..+.+.++.+.|.+. =||-++.+++.++++|.|..=...
T Consensus 263 ~e~A~~a~~aGad~I~vs~~g--gr~---~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHG--ARQ---LDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGG--GTS---STTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEeCCCC--CCc---CCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECH
Confidence 344777888999999996532 110 01 00112334444444455677777 567799999999999999888888
Q ss_pred HHHhh
Q psy15335 103 PLVLA 107 (552)
Q Consensus 103 Ptr~A 107 (552)
|..++
T Consensus 338 ~~l~~ 342 (392)
T 2nzl_A 338 PIVWG 342 (392)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88775
No 106
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=34.78 E-value=1.1e+02 Score=31.62 Aligned_cols=81 Identities=16% Similarity=0.163 Sum_probs=53.2
Q ss_pred HHHHHHHHcCCcceEEEccccCCCCCccccCh-hH--------------------HHHHHHHhccCCCCCCcEeec-CCC
Q psy15335 25 RYCAELYATRDVHGFLIDGLCADEGATEDLGC-DV--------------------VNAVLENTVPYLPNDKLRIIQ-GPW 82 (552)
Q Consensus 25 ~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~-ee--------------------m~~iL~~v~~~LP~dKPRyLm-GvG 82 (552)
.+-|+.+.+.|++++.++|-. |-+...++. .. ....|.++...++ +.|...- |+-
T Consensus 201 ~~~A~~l~~aGad~I~V~g~G--Gt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~-~ipvia~GGI~ 277 (368)
T 3vkj_A 201 METAKLLYSYGIKNFDTSGQG--GTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP-DSFLVGSGGIR 277 (368)
T ss_dssp HHHHHHHHHTTCCEEECCCBT--SBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST-TCEEEEESSCC
T ss_pred HHHHHHHHhCCCCEEEEeCCC--CCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC-CCcEEEECCCC
Confidence 346888889999999997653 211000000 00 0122334444554 5677775 678
Q ss_pred CHHHHHHHHHcCCccccChhHHHhhc
Q psy15335 83 SPMNIVQFVQRGIDMFDSGLPLVLAD 108 (552)
Q Consensus 83 ~P~dIl~aValGVDmFDcv~Ptr~AR 108 (552)
+|.+++.++++|.|.+=...|..++.
T Consensus 278 ~~~d~~kal~lGA~~v~ig~~~l~~~ 303 (368)
T 3vkj_A 278 SGLDAAKAIALGADIAGMALPVLKSA 303 (368)
T ss_dssp SHHHHHHHHHHTCSEEEECHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEcHHHHHHH
Confidence 99999999999999998888888764
No 107
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=34.37 E-value=46 Score=30.60 Aligned_cols=66 Identities=6% Similarity=0.024 Sum_probs=46.8
Q ss_pred HHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCcccc
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFD 99 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFD 99 (552)
+.++.+.+.|.+.+.++.... ..+ .+.+.++++.+++.+| +++. +.++.+|.++..+.+.|+|.+-
T Consensus 79 ~~i~~~~~~Gad~v~l~~~~~-~~p-----~~~~~~~i~~~~~~~~-~~~v-~~~~~t~~e~~~~~~~G~d~i~ 144 (223)
T 1y0e_A 79 KEVDELIESQCEVIALDATLQ-QRP-----KETLDELVSYIRTHAP-NVEI-MADIATVEEAKNAARLGFDYIG 144 (223)
T ss_dssp HHHHHHHHHTCSEEEEECSCS-CCS-----SSCHHHHHHHHHHHCT-TSEE-EEECSSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhCCCCEEEEeeecc-cCc-----ccCHHHHHHHHHHhCC-CceE-EecCCCHHHHHHHHHcCCCEEE
Confidence 345666678999999885442 011 0345677888877774 6665 4688999999999999999864
No 108
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=33.55 E-value=1.2e+02 Score=28.19 Aligned_cols=81 Identities=6% Similarity=-0.059 Sum_probs=53.6
Q ss_pred ceEEeeccCCCH-HHHHHHHHHHHcCCcceEEEccccCCCCCcccc-----------------ChhHHHHHHHHhccCCC
Q psy15335 10 CVIAPIQGGLDL-SLRRYCAELYATRDVHGFLIDGLCADEGATEDL-----------------GCDVVNAVLENTVPYLP 71 (552)
Q Consensus 10 ~LfGIVQGG~~~-DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m-----------------~~eem~~iL~~v~~~LP 71 (552)
.+.+-+-.|... +.-.+.++.+.+. ++.+=++ +.. .+| .+ +.....++|..+++..
T Consensus 6 ~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~-~p~-sdp--~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~- 79 (248)
T 1geq_A 6 SLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELG-IPF-SDP--IADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS- 79 (248)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEE-CCC-SCC--TTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC-
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEEC-CCC-CCC--CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC-
Confidence 456666666442 4556677888777 8888887 110 011 11 2345678888888775
Q ss_pred CCCcEeecCCCCH-------HHHHHHHHcCCcc
Q psy15335 72 NDKLRIIQGPWSP-------MNIVQFVQRGIDM 97 (552)
Q Consensus 72 ~dKPRyLmGvG~P-------~dIl~aValGVDm 97 (552)
+.|.++|+..+| .++-.+.+.|+|.
T Consensus 80 -~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~ 111 (248)
T 1geq_A 80 -STPIVLMTYYNPIYRAGVRNFLAEAKASGVDG 111 (248)
T ss_dssp -CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCE
T ss_pred -CCCEEEEeccchhhhcCHHHHHHHHHHCCCCE
Confidence 579999885577 6777888999994
No 109
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=33.41 E-value=78 Score=32.18 Aligned_cols=66 Identities=11% Similarity=0.003 Sum_probs=48.6
Q ss_pred HHHHHHcCCcceEEEccccC----CCC-CccccChhHHHHHHHHhccCCCCCCcEee---cCCCCHHHHHHHHH
Q psy15335 27 CAELYATRDVHGFLIDGLCA----DEG-ATEDLGCDVVNAVLENTVPYLPNDKLRII---QGPWSPMNIVQFVQ 92 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~v----~GE-~~~~m~~eem~~iL~~v~~~LP~dKPRyL---mGvG~P~dIl~aVa 92 (552)
||+.+.+.||+.+.++|.+. .|- .+..+..++|...+..+....+.+.|... +|.|.|..+...|.
T Consensus 37 sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~~v~ 110 (307)
T 3lye_A 37 SARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVARTVE 110 (307)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHHHHH
Confidence 77888889999999966431 233 33445678898888888877666788777 78889988776654
No 110
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=33.00 E-value=55 Score=33.84 Aligned_cols=64 Identities=14% Similarity=0.089 Sum_probs=41.8
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccC
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDS 100 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDc 100 (552)
++.+.+.+++.+.|...+ | ..+.+.++|+++++..| +.|...=.+.++++...+++.|+|.+..
T Consensus 113 ~~~lieaGvd~I~idta~--G------~~~~~~~~I~~ik~~~p-~v~Vi~G~v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 113 VKALVEAGVDVLLIDSSH--G------HSEGVLQRIRETRAAYP-HLEIIGGNVATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp HHHHHHTTCSEEEEECSC--T------TSHHHHHHHHHHHHHCT-TCEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhCCCCEEEEeCCC--C------CCHHHHHHHHHHHHhcC-CCceEeeeeCCHHHHHHHHHcCCCEEEE
Confidence 334445566666654222 1 23456777888877775 4564432388999999999999998775
No 111
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=32.76 E-value=73 Score=32.07 Aligned_cols=64 Identities=14% Similarity=-0.012 Sum_probs=48.2
Q ss_pred HHHHHHcCCcceEEEcccc----CCCCC-ccccChhHHHHHHHHhccCCCCCCcEee---cCCC-CHHHHHHHHH
Q psy15335 27 CAELYATRDVHGFLIDGLC----ADEGA-TEDLGCDVVNAVLENTVPYLPNDKLRII---QGPW-SPMNIVQFVQ 92 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~----v~GE~-~~~m~~eem~~iL~~v~~~LP~dKPRyL---mGvG-~P~dIl~aVa 92 (552)
||+.+.+.||+.+.+||.. ..|-| +..+..++|...+..+....+ .|... +|.| .|.++...|.
T Consensus 29 sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~--~PviaD~d~Gyg~~~~~~~~~v~ 101 (295)
T 1xg4_A 29 HALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCS--LPLLVDADIGFGSSAFNVARTVK 101 (295)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCC--SCEEEECTTCSSSSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCC--CCEEecCCcccCCCHHHHHHHHH
Confidence 6777888999999999982 23433 345678899999988887765 68766 6788 8998877654
No 112
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=32.61 E-value=1.5e+02 Score=29.64 Aligned_cols=74 Identities=8% Similarity=0.106 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccc
Q psy15335 20 DLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 20 ~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmF 98 (552)
..+.-.+-++++.+.++..+.|+|-. +++. .+..+.+.+++..+.+.-++ .-.-.|.-+++.+-.+.+.|+|.+
T Consensus 100 s~eei~~~~~~~~~~g~~~i~~~gg~--~~p~-~~~~~~l~~ll~~ik~~g~~--i~~t~G~l~~e~l~~L~~aGvd~v 173 (369)
T 1r30_A 100 EVEQVLESARKAKAAGSTRFCMGAAW--KNPH-ERDMPYLEQMVQGVKAMGLE--ACMTLGTLSESQAQRLANAGLDYY 173 (369)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECC--SSCC-TTTHHHHHHHHHHHHHTTSE--EEEECSSCCHHHHHHHHHHCCCEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeCC--CCCC-cCCHHHHHHHHHHHHHcCCe--EEEecCCCCHHHHHHHHHCCCCEE
Confidence 45555566777778899999987622 1222 24578888888888764111 112367778999999999999964
No 113
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=32.51 E-value=48 Score=33.88 Aligned_cols=65 Identities=15% Similarity=0.225 Sum_probs=49.5
Q ss_pred HHHHHHcCCcceEEEcccc----CCC-CCccccChhHHHHHHHHhccCCCCCCcEee---cCCCCHHHHHHHHH
Q psy15335 27 CAELYATRDVHGFLIDGLC----ADE-GATEDLGCDVVNAVLENTVPYLPNDKLRII---QGPWSPMNIVQFVQ 92 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~----v~G-E~~~~m~~eem~~iL~~v~~~LP~dKPRyL---mGvG~P~dIl~aVa 92 (552)
||+.+.+.||+.+.+||++ ..| +.+..+..++|...+..+....| +.|... +|.|.|.++...|.
T Consensus 51 sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~-~~PviaD~d~Gyg~~~~v~~tv~ 123 (318)
T 1zlp_A 51 SAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAP-NLCVVVDGDTGGGGPLNVQRFIR 123 (318)
T ss_dssp HHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSS-SSEEEEECTTCSSSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhcc-CCCEEEeCCCCCCCHHHHHHHHH
Confidence 6777888999999999962 124 33345678999999988888775 588877 78889998877654
No 114
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=32.33 E-value=1.4e+02 Score=30.82 Aligned_cols=75 Identities=15% Similarity=0.148 Sum_probs=51.6
Q ss_pred cCCCHHHHHHHHHHHHcCCcceEEEccccC-------CCCCccccChh-HHHHHHHHhccCCCCCCcEeecCC---CCHH
Q psy15335 17 GGLDLSLRRYCAELYATRDVHGFLIDGLCA-------DEGATEDLGCD-VVNAVLENTVPYLPNDKLRIIQGP---WSPM 85 (552)
Q Consensus 17 GG~~~DLR~~SA~eL~~l~f~GyaIGGl~v-------~GE~~~~m~~e-em~~iL~~v~~~LP~dKPRyLmGv---G~P~ 85 (552)
||...+.-++.++.+ +.+.+.|. +.+ .|+. +.. .+.++|+++++.+ +.|..+=++ -+|.
T Consensus 133 ~~~~~~~~~~av~~~---~a~al~Ih-ln~~~~~~~p~g~~----~~~~~~~~~i~~i~~~~--~vPVivK~vG~g~s~~ 202 (368)
T 3vkj_A 133 KGYGLKEFQDAIQMI---EADAIAVH-LNPAQEVFQPEGEP----EYQIYALEKLRDISKEL--SVPIIVKESGNGISME 202 (368)
T ss_dssp TTCCHHHHHHHHHHT---TCSEEEEE-CCHHHHHHSSSCCC----BCBTHHHHHHHHHHTTC--SSCEEEECSSSCCCHH
T ss_pred CCCCHHHHHHHHHHh---cCCCeEEE-ecchhhhhCCCCCc----hhhHHHHHHHHHHHHHc--CCCEEEEeCCCCCCHH
Confidence 346778877777766 45666664 211 1111 122 4688888888877 589988655 3899
Q ss_pred HHHHHHHcCCccccCh
Q psy15335 86 NIVQFVQRGIDMFDSG 101 (552)
Q Consensus 86 dIl~aValGVDmFDcv 101 (552)
+...+++.|+|.++..
T Consensus 203 ~A~~l~~aGad~I~V~ 218 (368)
T 3vkj_A 203 TAKLLYSYGIKNFDTS 218 (368)
T ss_dssp HHHHHHHTTCCEEECC
T ss_pred HHHHHHhCCCCEEEEe
Confidence 9999999999988743
No 115
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=32.23 E-value=47 Score=32.26 Aligned_cols=72 Identities=10% Similarity=-0.004 Sum_probs=43.9
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccCh
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSG 101 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv 101 (552)
+++..+.+++.+.+|-+-+ ....+.. ...=.+.+.++.+.++.+.|.+..|-=+|.++..+.+.|+|.|=..
T Consensus 148 a~~A~~~GaDyI~vgpvf~-T~tK~~~-~~~gl~~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~~aGa~gvav~ 219 (243)
T 3o63_A 148 VAAAAAGDADYFCVGPCWP-TPTKPGR-AAPGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVV 219 (243)
T ss_dssp HHHHHHSSCSEEEECCSSC-CCC------CCCHHHHHHHHTC---CCCEEEESSCCTTTHHHHHHTTCCCEEES
T ss_pred HHHHhhCCCCEEEEcCccC-CCCCCCc-chhhHHHHHHHHHhccCCCCEEEecCCCHHHHHHHHHcCCCEEEEe
Confidence 3344467999999986432 1110000 0011355666666666789999887559999999999999966433
No 116
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=31.69 E-value=65 Score=32.60 Aligned_cols=64 Identities=11% Similarity=-0.017 Sum_probs=46.1
Q ss_pred HHHHHHcCCcceEEEccccC----CCC-CccccChhHHHHHHHHhccCCCCCCcEee---cCCCCHHHHHHHHH
Q psy15335 27 CAELYATRDVHGFLIDGLCA----DEG-ATEDLGCDVVNAVLENTVPYLPNDKLRII---QGPWSPMNIVQFVQ 92 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~v----~GE-~~~~m~~eem~~iL~~v~~~LP~dKPRyL---mGvG~P~dIl~aVa 92 (552)
||+.+.+.||+.+.+||++. .|- .+..+..++|...+..+.... +.|... +|.|.|..+...|.
T Consensus 34 sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~--~~PviaD~d~Gyg~~~~v~~~v~ 105 (298)
T 3eoo_A 34 AAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT--NLPLLVDIDTGWGGAFNIARTIR 105 (298)
T ss_dssp HHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHC--CSCEEEECTTCSSSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhc--CCeEEEECCCCCCCHHHHHHHHH
Confidence 67777788999999998331 243 334456788888888877654 468766 78889998877654
No 117
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=31.58 E-value=49 Score=32.28 Aligned_cols=50 Identities=10% Similarity=-0.021 Sum_probs=39.2
Q ss_pred HHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHH
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMN 86 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~d 86 (552)
+.++.+.+.|.+.+.|||-.. +..+.+.++++.+++ .+.|.+||. |.|..
T Consensus 22 ~~~~~~~~~GtD~i~vGGs~g-------vt~~~~~~~v~~ik~---~~~Pvvlfp-~~~~~ 71 (228)
T 3vzx_A 22 EQLEILCESGTDAVIIGGSDG-------VTEDNVLRMMSKVRR---FLVPCVLEV-SAIEA 71 (228)
T ss_dssp THHHHHHTSSCSEEEECCCSC-------CCHHHHHHHHHHHTT---SSSCEEEEC-SCGGG
T ss_pred HHHHHHHHcCCCEEEECCcCC-------CCHHHHHHHHHHhhc---cCCCEEEeC-CCHHH
Confidence 455667889999999998552 357889999999987 489999987 55744
No 118
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=31.55 E-value=87 Score=29.66 Aligned_cols=77 Identities=9% Similarity=0.051 Sum_probs=50.1
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEc-cccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC-CCCHHHHHHHHHc
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLID-GLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG-PWSPMNIVQFVQR 93 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIG-Gl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG-vG~P~dIl~aVal 93 (552)
-++...+.-.+.++.+.+.|.+++.+. |+...|- ..+.+..+.+. ++..-|....| +-++++.++.+++
T Consensus 126 ~~~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga-----~~~~i~~v~~~----v~~~ipVia~GGI~t~~da~~~l~a 196 (225)
T 1mzh_A 126 TPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGT-----TLEEVRLIKSS----AKGRIKVKASGGIRDLETAISMIEA 196 (225)
T ss_dssp GGGCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCC-----CHHHHHHHHHH----HTTSSEEEEESSCCSHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCC-----CHHHHHHHHHH----hCCCCcEEEECCCCCHHHHHHHHHh
Confidence 456667667778888888899988654 3322121 23333333333 34566777655 6689999999999
Q ss_pred CCccccCh
Q psy15335 94 GIDMFDSG 101 (552)
Q Consensus 94 GVDmFDcv 101 (552)
|.|.+=.+
T Consensus 197 GA~~iG~s 204 (225)
T 1mzh_A 197 GADRIGTS 204 (225)
T ss_dssp TCSEEEES
T ss_pred CchHHHHc
Confidence 99965433
No 119
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=31.19 E-value=48 Score=32.35 Aligned_cols=62 Identities=10% Similarity=0.041 Sum_probs=45.5
Q ss_pred eeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCC-CHH
Q psy15335 14 PIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPW-SPM 85 (552)
Q Consensus 14 IVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG-~P~ 85 (552)
+.-|--+++.-.+.++.+.+.|.+.+-|||.. | +..+.+.++++.+++ .+.|..||+=. .|.
T Consensus 12 it~gDP~~~~t~~~~~~l~~~GaD~IelG~S~--g-----~t~~~~~~~v~~ir~---~~~Pivl~~y~~n~i 74 (234)
T 2f6u_A 12 ITKLDPDRTNTDEIIKAVADSGTDAVMISGTQ--N-----VTYEKARTLIEKVSQ---YGLPIVVEPSDPSNV 74 (234)
T ss_dssp EEEECTTSCCCHHHHHHHHTTTCSEEEECCCT--T-----CCHHHHHHHHHHHTT---SCCCEEECCSSCCCC
T ss_pred EEeeCCCccccHHHHHHHHHcCCCEEEECCCC--C-----CCHHHHHHHHHHhcC---CCCCEEEecCCcchh
Confidence 33343334444556888999999999999832 3 357889999999987 48999999977 444
No 120
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=30.96 E-value=84 Score=28.97 Aligned_cols=76 Identities=14% Similarity=0.072 Sum_probs=47.0
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccChhHHHhh
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLA 107 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv~Ptr~A 107 (552)
++++.+.+++.+.+|.+-. +....-. ...-.+.+..+.+.+ +.|.++.|-=+|.++.++++.|+|.++.......+
T Consensus 123 ~~~a~~~gaD~i~~~~~f~-~~~~~g~-~~~~~~~l~~~~~~~--~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i~~~ 198 (221)
T 1yad_A 123 AVQAEKEDADYVLFGHVFE-TDCKKGL-EGRGVSLLSDIKQRI--SIPVIAIGGMTPDRLRDVKQAGADGIAVMSGIFSS 198 (221)
T ss_dssp HHHHHHTTCSEEEEECCC------------CHHHHHHHHHHHC--CSCEEEESSCCGGGHHHHHHTTCSEEEESHHHHTS
T ss_pred HHHHHhCCCCEEEECCccc-cCCCCCC-CCCCHHHHHHHHHhC--CCCEEEECCCCHHHHHHHHHcCCCEEEEhHHhhCC
Confidence 4555578899999986432 1110000 001134444444433 67888877449999999999999999988776544
No 121
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=30.64 E-value=1.1e+02 Score=32.72 Aligned_cols=72 Identities=10% Similarity=-0.021 Sum_probs=42.6
Q ss_pred HHHHHHHcCCcceEEEccccCCCCC-cc----cc---ChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCc
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGA-TE----DL---GCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGID 96 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~-~~----~m---~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVD 96 (552)
+-|+.+.+.|++++.+|. .+ |.- +. -. ....+.++.+.+... +.|... -|+.+|.+|..|.++|.|
T Consensus 309 e~a~~~~~aGad~i~vg~-g~-gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~---~iPVIa~GGI~~~~di~kala~GA~ 383 (511)
T 3usb_A 309 EATKALIEAGANVVKVGI-GP-GSICTTRVVAGVGVPQLTAVYDCATEARKH---GIPVIADGGIKYSGDMVKALAAGAH 383 (511)
T ss_dssp HHHHHHHHHTCSEEEECS-SC-STTCCHHHHHCCCCCHHHHHHHHHHHHHTT---TCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHhCCCEEEECC-CC-ccccccccccCCCCCcHHHHHHHHHHHHhC---CCcEEEeCCCCCHHHHHHHHHhCch
Confidence 446777788999999852 21 110 00 00 112233333333221 577665 699999999999999998
Q ss_pred cccChh
Q psy15335 97 MFDSGL 102 (552)
Q Consensus 97 mFDcv~ 102 (552)
..=...
T Consensus 384 ~V~vGs 389 (511)
T 3usb_A 384 VVMLGS 389 (511)
T ss_dssp EEEEST
T ss_pred hheecH
Confidence 654433
No 122
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=29.76 E-value=61 Score=31.19 Aligned_cols=67 Identities=6% Similarity=0.003 Sum_probs=44.5
Q ss_pred cceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccChhHHH
Q psy15335 36 VHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSGLPLV 105 (552)
Q Consensus 36 f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv~Ptr 105 (552)
++.+.+.++.+ |-..+.+ .....+-|..+++.++ +.+.-+-|-=+++.+..+++.|+|+|=..+...
T Consensus 139 ~D~VlvmsV~p-Gf~gq~f-~~~~l~ki~~lr~~~~-~~~I~VdGGI~~~ti~~~~~aGAd~~V~GsaIf 205 (227)
T 1tqx_A 139 INTVLVMTVEP-GFGGQSF-MHDMMGKVSFLRKKYK-NLNIQVDGGLNIETTEISASHGANIIVAGTSIF 205 (227)
T ss_dssp CSEEEEESSCT-TCSSCCC-CGGGHHHHHHHHHHCT-TCEEEEESSCCHHHHHHHHHHTCCEEEESHHHH
T ss_pred cCEEEEeeecc-CCCCccc-chHHHHHHHHHHHhcc-CCeEEEECCCCHHHHHHHHHcCCCEEEEeHHHh
Confidence 67777776665 3222222 2344555555655554 677777777789999999999999886655544
No 123
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=29.21 E-value=1.8e+02 Score=27.28 Aligned_cols=77 Identities=16% Similarity=0.105 Sum_probs=50.4
Q ss_pred eccCCCH---HHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeec-CCCCHHHHHHH
Q psy15335 15 IQGGLDL---SLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQ-GPWSPMNIVQF 90 (552)
Q Consensus 15 VQGG~~~---DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLm-GvG~P~dIl~a 90 (552)
+.||... +. .+-|+.+.+.|++.+.+-.+...+.. .....+++..+++.. +.|..+- |+.+|+++..+
T Consensus 26 ~~~~~~~~~~~~-~~~a~~~~~~G~~~i~v~d~~~~~~~-----~~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~ 97 (247)
T 3tdn_A 26 TYSGKKNTGILL-RDWVVEVEKRGAGEILLTSIDRDGTK-----SGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEA 97 (247)
T ss_dssp ETTTTEEEEEEH-HHHHHHHHHTTCSEEEEEETTTTTCS-----SCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHH
T ss_pred EcCCeecCCCCH-HHHHHHHHHcCCCEEEEEecCcccCC-----CcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHH
Confidence 5566532 33 35777788899999887554321111 111245666666665 5788775 78899999999
Q ss_pred HHcCCcccc
Q psy15335 91 VQRGIDMFD 99 (552)
Q Consensus 91 ValGVDmFD 99 (552)
.+.|+|.+=
T Consensus 98 l~~Gad~V~ 106 (247)
T 3tdn_A 98 FLRGADKVS 106 (247)
T ss_dssp HHTTCSEEC
T ss_pred HHcCCCeee
Confidence 999999653
No 124
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=29.12 E-value=51 Score=34.90 Aligned_cols=77 Identities=10% Similarity=-0.114 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC---CC-CHHHHHHHHHcC
Q psy15335 19 LDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG---PW-SPMNIVQFVQRG 94 (552)
Q Consensus 19 ~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG---vG-~P~dIl~aValG 94 (552)
..++.-.+.++.+.++|.+-+.|.-..+ .+.+.++.+++..++..++ .|..++. .| -....+.|+..|
T Consensus 177 ~d~~~~~~v~~~~~~~Ga~~i~l~DTvG------~~~P~~v~~lv~~l~~~~~--~~i~~H~Hnd~GlAvAN~laAv~aG 248 (423)
T 3ivs_A 177 SDLVDLLSLYKAVDKIGVNRVGIADTVG------CATPRQVYDLIRTLRGVVS--CDIECHFHNDTGMAIANAYCALEAG 248 (423)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEETTS------CCCHHHHHHHHHHHHHHCS--SEEEEEEBCTTSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhCCCccccCCccC------cCCHHHHHHHHHHHHhhcC--CeEEEEECCCCchHHHHHHHHHHhC
Confidence 4555556777888888888888774332 3467888888888887664 4554432 22 246788999999
Q ss_pred CccccChhH
Q psy15335 95 IDMFDSGLP 103 (552)
Q Consensus 95 VDmFDcv~P 103 (552)
+|.||++.-
T Consensus 249 a~~vd~ti~ 257 (423)
T 3ivs_A 249 ATHIDTSIL 257 (423)
T ss_dssp CCEEEEBGG
T ss_pred CCEEEEecc
Confidence 999999874
No 125
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=29.11 E-value=43 Score=34.12 Aligned_cols=76 Identities=11% Similarity=0.044 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCcceEEEccccC-----------------CCCCccccChhHHHHHHHHhccCCCCCCcEee-cCC-----
Q psy15335 25 RYCAELYATRDVHGFLIDGLCA-----------------DEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGP----- 81 (552)
Q Consensus 25 ~~SA~eL~~l~f~GyaIGGl~v-----------------~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGv----- 81 (552)
.++|+.+.+.||+|+=|=+-+. .|.+.+. ...-+.++|+++++.+++++|.-+ +..
T Consensus 161 ~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslen-R~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~ 239 (363)
T 3l5l_A 161 VDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDN-RSRFLLETLAAVREVWPENLPLTARFGVLEYDG 239 (363)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHH-HHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSS
T ss_pred HHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHH-HHHHHHHHHHHHHHHcCCCceEEEEecchhcCC
Q ss_pred ---CCHHH----HHHHHHcCCccccCh
Q psy15335 82 ---WSPMN----IVQFVQRGIDMFDSG 101 (552)
Q Consensus 82 ---G~P~d----Il~aValGVDmFDcv 101 (552)
.++.+ +-.+.++|||.++.+
T Consensus 240 ~G~~~~~~~~~la~~L~~~Gvd~i~vs 266 (363)
T 3l5l_A 240 RDEQTLEESIELARRFKAGGLDLLSVS 266 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEe
No 126
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=29.05 E-value=51 Score=29.78 Aligned_cols=72 Identities=11% Similarity=0.058 Sum_probs=43.8
Q ss_pred HHHcCCcceEEEccccCCCCC--ccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccChhHHHhh
Q psy15335 30 LYATRDVHGFLIDGLCADEGA--TEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLA 107 (552)
Q Consensus 30 eL~~l~f~GyaIGGl~v~GE~--~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv~Ptr~A 107 (552)
.+.+.+++.+.++++.+.+.. ...+..+. +..+.+.+ +.|.++.|-=+|.++.++.+.|+|.++.......+
T Consensus 123 ~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~----l~~l~~~~--~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i~~~ 196 (215)
T 1xi3_A 123 EAEKKGADYLGAGSVFPTKTKEDARVIGLEG----LRKIVESV--KIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGA 196 (215)
T ss_dssp HHHHHTCSEEEEECSSCC----CCCCCHHHH----HHHHHHHC--SSCEEEESSCCTTTHHHHHTTTCSEEEESHHHHTS
T ss_pred HHHhcCCCEEEEcCCccCCCCCCCCCcCHHH----HHHHHHhC--CCCEEEECCcCHHHHHHHHHcCCCEEEEhHHHhCC
Confidence 345678999998764321110 01122233 33333333 67888755335999999999999999988765543
No 127
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=29.03 E-value=1.3e+02 Score=29.88 Aligned_cols=62 Identities=13% Similarity=0.171 Sum_probs=40.4
Q ss_pred HcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccC
Q psy15335 32 ATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDS 100 (552)
Q Consensus 32 ~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDc 100 (552)
.+.+++-+.|..-.. .+...+.+...+++ +.+|++.|... -|+.+|+++..+..+|+|-|=.
T Consensus 186 ~~~ga~iIGinnr~l---~t~~~dl~~~~~L~----~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLV 248 (272)
T 3tsm_A 186 LKLSSRLLGVNNRNL---RSFEVNLAVSERLA----KMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLI 248 (272)
T ss_dssp TTSCCSEEEEECBCT---TTCCBCTHHHHHHH----HHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEE
T ss_pred HhcCCCEEEECCCCC---ccCCCChHHHHHHH----HhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 356788776663221 11122334444444 55688888665 8999999999999999997643
No 128
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=29.01 E-value=1.3e+02 Score=30.01 Aligned_cols=80 Identities=11% Similarity=-0.004 Sum_probs=48.9
Q ss_pred HHHHHHHcCCcceEEEccccCCCCC-------ccc------cCh-hHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHH
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGA-------TED------LGC-DVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQF 90 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~-------~~~------m~~-eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~a 90 (552)
+-++.+.+.|++++.+.+-. |.. .+. +.. -.-.+.|..+.+.+ .+.|... -||.+|.++..+
T Consensus 193 ~~a~~a~~~Gad~I~v~~~g--gt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~-~~ipvia~GGI~~~~d~~k~ 269 (349)
T 1p0k_A 193 ASAGKLYEAGAAAVDIGGYG--GTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF-PASTMIASGGLQDALDVAKA 269 (349)
T ss_dssp HHHHHHHHHTCSEEEEEC-----------------CCGGGGTTCSCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCC--CcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc-CCCeEEEECCCCCHHHHHHH
Confidence 44677888899999995421 100 000 000 00122333333334 4677776 788899999999
Q ss_pred HHcCCccccChhHHHhhc
Q psy15335 91 VQRGIDMFDSGLPLVLAD 108 (552)
Q Consensus 91 ValGVDmFDcv~Ptr~AR 108 (552)
+++|.|.+=...|..++.
T Consensus 270 l~~GAd~V~iG~~~l~~~ 287 (349)
T 1p0k_A 270 IALGASCTGMAGHFLKAL 287 (349)
T ss_dssp HHTTCSEEEECHHHHHHH
T ss_pred HHcCCCEEEEcHHHHHHH
Confidence 999999888777776653
No 129
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=28.98 E-value=1e+02 Score=30.88 Aligned_cols=64 Identities=14% Similarity=0.066 Sum_probs=48.7
Q ss_pred HHHHHHcCCcceEEEccccC---CC-CCccccChhHHHHHHHHhccCCCCCCcEee---cCCCCHHHHHHHHH
Q psy15335 27 CAELYATRDVHGFLIDGLCA---DE-GATEDLGCDVVNAVLENTVPYLPNDKLRII---QGPWSPMNIVQFVQ 92 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~v---~G-E~~~~m~~eem~~iL~~v~~~LP~dKPRyL---mGvG~P~dIl~aVa 92 (552)
||+.+.+.||+.+.+||.++ .| +.+..+..++|...+..+....+ .|... +|.|.|.++...|.
T Consensus 27 sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~--~PviaD~d~Gyg~~~~~~~~v~ 97 (290)
T 2hjp_A 27 VAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVS--IPLIADIDTGFGNAVNVHYVVP 97 (290)
T ss_dssp HHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCS--SCEEEECTTTTSSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCC--CCEEEECCCCCCCHHHHHHHHH
Confidence 67778888999999998521 24 33345678999999999988875 78665 78889988877654
No 130
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=28.98 E-value=82 Score=33.45 Aligned_cols=79 Identities=15% Similarity=0.076 Sum_probs=47.0
Q ss_pred HHHHHHHHcCCcceEEEccccCCC-CCcccc-----C-hhHHHHHHHHhccCC---CCCCcEeec--CCCCHHHHHHHHH
Q psy15335 25 RYCAELYATRDVHGFLIDGLCADE-GATEDL-----G-CDVVNAVLENTVPYL---PNDKLRIIQ--GPWSPMNIVQFVQ 92 (552)
Q Consensus 25 ~~SA~eL~~l~f~GyaIGGl~v~G-E~~~~m-----~-~eem~~iL~~v~~~L---P~dKPRyLm--GvG~P~dIl~aVa 92 (552)
.+.++.+.+.|+++..+ |..+.+ ..+..+ . ..-+.++.+.+...+ ..+.|. +. |+.+|.+|+.|.+
T Consensus 295 ~~~a~~l~~aGad~I~V-g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipv-ia~GGi~~~~di~kAla 372 (503)
T 1me8_A 295 GEGFRYLADAGADFIKI-GIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPV-CSDGGIVYDYHMTLALA 372 (503)
T ss_dssp HHHHHHHHHHTCSEEEE-CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCE-EEESCCCSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEe-cccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceE-EEeCCCCCHHHHHHHHH
Confidence 44677778889999998 665411 111111 0 133344444333210 013454 46 9999999999999
Q ss_pred cCCccccChhHHH
Q psy15335 93 RGIDMFDSGLPLV 105 (552)
Q Consensus 93 lGVDmFDcv~Ptr 105 (552)
+|.|..=...|..
T Consensus 373 lGA~~V~iG~~~~ 385 (503)
T 1me8_A 373 MGADFIMLGRYFA 385 (503)
T ss_dssp TTCSEEEESHHHH
T ss_pred cCCCEEEECchhh
Confidence 9999766555554
No 131
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=28.78 E-value=93 Score=31.44 Aligned_cols=63 Identities=11% Similarity=0.168 Sum_probs=48.2
Q ss_pred HcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccChhHHHhhc
Q psy15335 32 ATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLAD 108 (552)
Q Consensus 32 ~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv~Ptr~AR 108 (552)
.+.|.+++.++- |+.++|.+++..+. ..-+.-.-|==+|+.|....+.|||.|-....+..++
T Consensus 215 l~aGaD~I~LDn----------~~~~~l~~av~~~~----~~v~ieaSGGIt~~~i~~~a~tGVD~IsvGalt~sa~ 277 (287)
T 3tqv_A 215 IAAKADIVMLDN----------FSGEDIDIAVSIAR----GKVALEVSGNIDRNSIVAIAKTGVDFISVGAITKHIK 277 (287)
T ss_dssp HHTTCSEEEEES----------CCHHHHHHHHHHHT----TTCEEEEESSCCTTTHHHHHTTTCSEEECSHHHHSBC
T ss_pred HHcCCCEEEEcC----------CCHHHHHHHHHhhc----CCceEEEECCCCHHHHHHHHHcCCCEEEEChhhcCCc
Confidence 346788888762 45678888888765 3455666777799999999999999999988876653
No 132
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=28.59 E-value=1.8e+02 Score=28.34 Aligned_cols=73 Identities=4% Similarity=-0.158 Sum_probs=52.0
Q ss_pred CCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCcc
Q psy15335 19 LDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDM 97 (552)
Q Consensus 19 ~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDm 97 (552)
+..+...+-++.|.+.|++-+-+|++.. ++-.+.| ++..+++..+.+. ++.|.-++. ....++-.+++.|+|.
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~-~~~~p~~--~~~~e~~~~i~~~--~~~~v~~l~-~n~~~i~~a~~~G~~~ 95 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVS-PKWVPQL--ADSREVMAGIRRA--DGVRYSVLV-PNMKGYEAAAAAHADE 95 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSC-TTTCGGG--TTHHHHHHHSCCC--SSSEEEEEC-SSHHHHHHHHHTTCSE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcC-ccccccc--cCHHHHHHHHHhC--CCCEEEEEe-CCHHHHHHHHHCCCCE
Confidence 6778888999999999999999987653 3311222 2455777777654 344443554 6789999999999983
No 133
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=27.97 E-value=74 Score=32.47 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=53.2
Q ss_pred HHHHHHHcCCcceEEEccccCCCCCccccC-hhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccChhH
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGATEDLG-CDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSGLP 103 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~-~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv~P 103 (552)
+-++.+.+.|++++.+++-. |.. ++ .....+.|..+.+.++.+.|.+. =||-++.++..+.++|.|.+=...|
T Consensus 237 e~a~~a~~~Gad~I~vs~~g--gr~---~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~ 311 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHG--ARQ---LDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRP 311 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGG--GTS---STTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEECCCC--Ccc---CCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHH
Confidence 44667778899999996522 110 11 01134555555566777788876 4677999999999999998888877
Q ss_pred HHhh
Q psy15335 104 LVLA 107 (552)
Q Consensus 104 tr~A 107 (552)
..++
T Consensus 312 ~l~~ 315 (370)
T 1gox_A 312 VVFS 315 (370)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 134
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=27.74 E-value=75 Score=32.24 Aligned_cols=64 Identities=11% Similarity=0.041 Sum_probs=45.6
Q ss_pred HHHHHHcCCcceEEEccccC---CC-CCccccChhHHHHHHHHhccCCCCCCcEee---cCCCCHHHHHHHHH
Q psy15335 27 CAELYATRDVHGFLIDGLCA---DE-GATEDLGCDVVNAVLENTVPYLPNDKLRII---QGPWSPMNIVQFVQ 92 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~v---~G-E~~~~m~~eem~~iL~~v~~~LP~dKPRyL---mGvG~P~dIl~aVa 92 (552)
||+.+.+.||+.+.+||+++ .| +.+..+..++|...+..++... +.|... +|.|.|.++...|.
T Consensus 41 sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~--~~pviaD~d~Gyg~~~~v~~~v~ 111 (305)
T 3ih1_A 41 AALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRAT--DLPVLVDIDTGFGGVLNVARTAV 111 (305)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHH--CCCEEEECTTCSSSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhc--CCCEEEECCCCCCCHHHHHHHHH
Confidence 77888889999999998331 12 3334456788888887776654 467666 78889988776654
No 135
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=27.73 E-value=66 Score=31.57 Aligned_cols=50 Identities=8% Similarity=-0.001 Sum_probs=39.7
Q ss_pred HHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCH
Q psy15335 24 RRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSP 84 (552)
Q Consensus 24 R~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P 84 (552)
-.+.++.+.+.|.+.+.|||-.. +..+.+.++++.+++ .+.|..||.- .|
T Consensus 25 ~~~~l~~~~~~GtDaI~vGgs~g-------vt~~~~~~~v~~ik~---~~~Piil~p~-~~ 74 (235)
T 3w01_A 25 SDDDLDAICMSQTDAIMIGGTDD-------VTEDNVIHLMSKIRR---YPLPLVLEIS-NI 74 (235)
T ss_dssp CHHHHHHHHTSSCSEEEECCSSC-------CCHHHHHHHHHHHTT---SCSCEEEECC-CS
T ss_pred CHHHHHHHHHcCCCEEEECCcCC-------cCHHHHHHHHHHhcC---cCCCEEEecC-CH
Confidence 44566678899999999998542 357889999999998 5889999874 56
No 136
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=27.62 E-value=94 Score=31.23 Aligned_cols=64 Identities=11% Similarity=-0.035 Sum_probs=48.6
Q ss_pred HHHHHHcCCcceEEEcccc----CCC-CCccccChhHHHHHHHHhccCCCCCCcEee---cCCCCHHHHHHHHH
Q psy15335 27 CAELYATRDVHGFLIDGLC----ADE-GATEDLGCDVVNAVLENTVPYLPNDKLRII---QGPWSPMNIVQFVQ 92 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~----v~G-E~~~~m~~eem~~iL~~v~~~LP~dKPRyL---mGvG~P~dIl~aVa 92 (552)
||+.+.+.||+.+.+||.. ..| +.+..+..++|...+..+....+ .|... +|.|.|.++...|.
T Consensus 33 sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~--~PviaD~d~Gyg~~~~~~~~v~ 104 (287)
T 3b8i_A 33 SARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVAR--LPVIADADHGYGNALNVMRTVV 104 (287)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCS--SCEEEECTTCSSSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCC--CCEEEECCCCCCCHHHHHHHHH
Confidence 7777888999999999882 124 33345678999999999888774 58665 77889998877664
No 137
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=27.59 E-value=62 Score=30.99 Aligned_cols=61 Identities=11% Similarity=0.036 Sum_probs=43.9
Q ss_pred HHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccc
Q psy15335 27 CAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmF 98 (552)
-++++.+.|.+.++++.-.. . +++.+.++++.+.+. ....+..+.++++...+.++|+|++
T Consensus 93 ~i~~~~~aGad~I~l~~~~~--~-----~p~~l~~~i~~~~~~----g~~v~~~v~t~eea~~a~~~Gad~I 153 (229)
T 3q58_A 93 DVDALAQAGADIIAFDASFR--S-----RPVDIDSLLTRIRLH----GLLAMADCSTVNEGISCHQKGIEFI 153 (229)
T ss_dssp HHHHHHHHTCSEEEEECCSS--C-----CSSCHHHHHHHHHHT----TCEEEEECSSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEEEECcccc--C-----ChHHHHHHHHHHHHC----CCEEEEecCCHHHHHHHHhCCCCEE
Confidence 35667788999999886442 1 233456666666553 3445678999999999999999987
No 138
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=27.55 E-value=2.1e+02 Score=32.95 Aligned_cols=89 Identities=10% Similarity=-0.008 Sum_probs=58.1
Q ss_pred eEEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCC------ccccChhHHHHHHHHhccCCCCCCcEee---cCC
Q psy15335 11 VIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGA------TEDLGCDVVNAVLENTVPYLPNDKLRII---QGP 81 (552)
Q Consensus 11 LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~------~~~m~~eem~~iL~~v~~~LP~dKPRyL---mGv 81 (552)
+++.+-+|...+.-.++++.+.+.+++++.|--.+++... ...-+.+.+.++|+++++.+ ++|..+ .++
T Consensus 637 ~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~--~~Pv~vK~~~~~ 714 (1025)
T 1gte_A 637 VIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV--QIPFFAKLTPNV 714 (1025)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC--SSCEEEEECSCS
T ss_pred eEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh--CCceEEEeCCCh
Confidence 3433436778888889999999999999999644332100 00014677888898888766 578776 333
Q ss_pred CCHHHH-HHHHHcCCccccCh
Q psy15335 82 WSPMNI-VQFVQRGIDMFDSG 101 (552)
Q Consensus 82 G~P~dI-l~aValGVDmFDcv 101 (552)
-+..++ ..+.+.|+|.+..+
T Consensus 715 ~~~~~~a~~~~~~G~d~i~v~ 735 (1025)
T 1gte_A 715 TDIVSIARAAKEGGADGVTAT 735 (1025)
T ss_dssp SCHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEe
Confidence 344444 44567888877653
No 139
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=27.46 E-value=1.3e+02 Score=28.68 Aligned_cols=48 Identities=21% Similarity=0.212 Sum_probs=34.9
Q ss_pred hHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccChhHHHh
Q psy15335 57 DVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSGLPLVL 106 (552)
Q Consensus 57 eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv~Ptr~ 106 (552)
....+.|..+++.. +.|..+ .|+.+|.++..+.+.|.|.+=..+....
T Consensus 187 ~~~~~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 187 PRVESLIQEVKKVT--NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVR 235 (262)
T ss_dssp THHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred chHHHHHHHHHhhc--CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 44556666666554 567776 8888899999999999998765555443
No 140
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=27.38 E-value=89 Score=29.04 Aligned_cols=59 Identities=15% Similarity=0.250 Sum_probs=39.8
Q ss_pred HHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEe-ecCCCCHHHHHHHHHcCCc
Q psy15335 27 CAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRI-IQGPWSPMNIVQFVQRGID 96 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRy-LmGvG~P~dIl~aValGVD 96 (552)
-++.+.+.|.+++.+=+... .+.+.++++.+.+. --++.. ++|+.+|.++..+.+.|+|
T Consensus 75 ~~~~~~~aGad~i~vh~~~~---------~~~~~~~~~~~~~~--g~~~~~d~l~~~T~~~~~~~~~~g~d 134 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAH---------IATIAACKKVADEL--NGEIQIEIYGNWTMQDAKAWVDLGIT 134 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSC---------HHHHHHHHHHHHHH--TCEEEEECCSSCCHHHHHHHHHTTCC
T ss_pred HHHHHHhcCCCEEEEecCCC---------HHHHHHHHHHHHHh--CCccceeeeecCCHHHHHHHHHcCcc
Confidence 34667778999998754331 23356666665543 123333 7899999999999999987
No 141
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=27.16 E-value=1.6e+02 Score=26.53 Aligned_cols=43 Identities=12% Similarity=0.172 Sum_probs=31.8
Q ss_pred hhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCcc-c
Q psy15335 56 CDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDM-F 98 (552)
Q Consensus 56 ~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDm-F 98 (552)
.+.+.++++.+.+.-+++-|.++=|.--+.+...+-+.|+|- |
T Consensus 83 ~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 83 LHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp HHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEE
Confidence 466778888777765556777777766677777788999994 6
No 142
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=27.16 E-value=79 Score=30.70 Aligned_cols=31 Identities=19% Similarity=0.097 Sum_probs=25.5
Q ss_pred CCcEee-cCCCCHHHHHHHHHcCCccccChhH
Q psy15335 73 DKLRII-QGPWSPMNIVQFVQRGIDMFDSGLP 103 (552)
Q Consensus 73 dKPRyL-mGvG~P~dIl~aValGVDmFDcv~P 103 (552)
+.|..+ .||.+|+++.+++++|+|.+=....
T Consensus 178 ~iPviv~gGI~t~eda~~~~~~GAdgViVGSA 209 (264)
T 1xm3_A 178 KVPVIVDAGIGSPKDAAYAMELGADGVLLNTA 209 (264)
T ss_dssp SSCBEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHH
Confidence 678877 6999999999999999996554443
No 143
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=27.13 E-value=58 Score=30.53 Aligned_cols=69 Identities=12% Similarity=0.027 Sum_probs=42.5
Q ss_pred CcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccChhHHHh
Q psy15335 35 DVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSGLPLVL 106 (552)
Q Consensus 35 ~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv~Ptr~ 106 (552)
+.+.+.++.+.+ |-..+.+. ....+-|..+++..+ +.|..+-|-=+|+.+..+++.|+|.|=..+...-
T Consensus 138 ~~d~vl~~sv~p-g~~g~~~~-~~~l~~i~~~~~~~~-~~pi~v~GGI~~~ni~~~~~aGaD~vvvGsai~~ 206 (228)
T 1h1y_A 138 PVELVLVMTVEP-GFGGQKFM-PEMMEKVRALRKKYP-SLDIEVDGGLGPSTIDVAASAGANCIVAGSSIFG 206 (228)
T ss_dssp CCSEEEEESSCT-TCSSCCCC-GGGHHHHHHHHHHCT-TSEEEEESSCSTTTHHHHHHHTCCEEEESHHHHT
T ss_pred CCCEEEEEeecC-CCCcccCC-HHHHHHHHHHHHhcC-CCCEEEECCcCHHHHHHHHHcCCCEEEECHHHHC
Confidence 677777876554 21112222 233444555555554 6788765545679999999999998766655443
No 144
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=26.88 E-value=93 Score=31.19 Aligned_cols=73 Identities=18% Similarity=0.198 Sum_probs=48.7
Q ss_pred CCCHHHHHHHHHHHHcCC--cceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC-CCCHHHHHHHHHcC
Q psy15335 18 GLDLSLRRYCAELYATRD--VHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG-PWSPMNIVQFVQRG 94 (552)
Q Consensus 18 G~~~DLR~~SA~eL~~l~--f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG-vG~P~dIl~aValG 94 (552)
|...+..+ -++.+.+.+ ++.+.|.... | +.....++|+++++..| .|..+-| +.++++...+++.|
T Consensus 102 g~~~~~~~-~a~~~~~~g~~~~~i~i~~~~--G------~~~~~~~~i~~lr~~~~--~~~vi~G~v~s~e~A~~a~~aG 170 (336)
T 1ypf_A 102 GVKEDEYE-FVQQLAAEHLTPEYITIDIAH--G------HSNAVINMIQHIKKHLP--ESFVIAGNVGTPEAVRELENAG 170 (336)
T ss_dssp CCSHHHHH-HHHHHHHTTCCCSEEEEECSS--C------CSHHHHHHHHHHHHHCT--TSEEEEEEECSHHHHHHHHHHT
T ss_pred CCCHHHHH-HHHHHHhcCCCCCEEEEECCC--C------CcHHHHHHHHHHHHhCC--CCEEEECCcCCHHHHHHHHHcC
Confidence 33444333 356666766 7777664211 2 23455677777777764 2555567 88999999999999
Q ss_pred CccccCh
Q psy15335 95 IDMFDSG 101 (552)
Q Consensus 95 VDmFDcv 101 (552)
+|.++.+
T Consensus 171 ad~Ivvs 177 (336)
T 1ypf_A 171 ADATKVG 177 (336)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 9998875
No 145
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=26.73 E-value=1.3e+02 Score=29.99 Aligned_cols=84 Identities=14% Similarity=-0.005 Sum_probs=53.2
Q ss_pred eccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC-CCCHHHHHHHHHc
Q psy15335 15 IQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG-PWSPMNIVQFVQR 93 (552)
Q Consensus 15 VQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG-vG~P~dIl~aVal 93 (552)
+.||...+.=.+-++.+.+.|++++-+.+-........ ..+....+++..+++.+ +.|...-| +-+|+++.++++.
T Consensus 222 ~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a~~~l~~ 298 (338)
T 1z41_A 222 TDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADIN-VFPGYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQN 298 (338)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCC-CCTTTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCC-CCccchHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHc
Confidence 35677887777888999999999999875321000000 01111234444444444 56877765 4489999999999
Q ss_pred C-CccccCh
Q psy15335 94 G-IDMFDSG 101 (552)
Q Consensus 94 G-VDmFDcv 101 (552)
| +|++=-.
T Consensus 299 G~aD~V~iG 307 (338)
T 1z41_A 299 GRADLIFIG 307 (338)
T ss_dssp TSCSEEEEC
T ss_pred CCceEEeec
Confidence 9 9976433
No 146
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=26.46 E-value=1.2e+02 Score=30.77 Aligned_cols=65 Identities=12% Similarity=0.082 Sum_probs=46.1
Q ss_pred HHHHHHcCCcceEEEccccC----CCC-CccccChhHHHHHHHHhccCCCCCCcEee---cCCCCHHHHHHHHH
Q psy15335 27 CAELYATRDVHGFLIDGLCA----DEG-ATEDLGCDVVNAVLENTVPYLPNDKLRII---QGPWSPMNIVQFVQ 92 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~v----~GE-~~~~m~~eem~~iL~~v~~~LP~dKPRyL---mGvG~P~dIl~aVa 92 (552)
||+.+.+.||+.+.++|.+. .|- ....+..++|...+..+....+ +.|... +|.|.|..+...|.
T Consensus 30 sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~-~~PviaD~d~Gyg~~~~v~~tv~ 102 (302)
T 3fa4_A 30 SARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISP-STPVIADADTGYGGPIMVARTTE 102 (302)
T ss_dssp HHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTST-TSCEEEECTTTTSSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhcc-CCCEEEECCCCCCCHHHHHHHHH
Confidence 78888899999999976431 233 3334567888888877766443 778776 78889988776654
No 147
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=26.26 E-value=2e+02 Score=28.54 Aligned_cols=90 Identities=13% Similarity=0.120 Sum_probs=0.0
Q ss_pred cccCCCCceEEeeccCCCHHHHHHHHHHHHcCCcceEEEcc-----------------------ccCCCCCccccChhHH
Q psy15335 3 RKALKDTCVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDG-----------------------LCADEGATEDLGCDVV 59 (552)
Q Consensus 3 ~e~Lk~q~LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGG-----------------------l~v~GE~~~~m~~eem 59 (552)
++ .+-..++-.|-+|...+. |+.+.+.|++++.+.| +.. |.+ .
T Consensus 178 r~-~~~Pv~vK~v~~g~~~e~----a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~-g~~--------~ 243 (332)
T 1vcf_A 178 LP-LPFPVMVKEVGHGLSREA----ALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEI-GIP--------T 243 (332)
T ss_dssp CS-CSSCEEEECSSSCCCHHH----HHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTC-SCB--------H
T ss_pred Hc-CCCCEEEEecCCCCCHHH----HHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhc-ccc--------H
Q ss_pred HHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccChhHHHhh
Q psy15335 60 NAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSGLPLVLA 107 (552)
Q Consensus 60 ~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv~Ptr~A 107 (552)
.+.|..+.+.++ +.|... =||-++.+++.++++|.|.+=...|..++
T Consensus 244 ~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~ 291 (332)
T 1vcf_A 244 ARAILEVREVLP-HLPLVASGGVYTGTDGAKALALGADLLAVARPLLRP 291 (332)
T ss_dssp HHHHHHHHHHCS-SSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHH
T ss_pred HHHHHHHHHhcC-CCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHH
No 148
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=26.15 E-value=1.1e+02 Score=27.78 Aligned_cols=59 Identities=10% Similarity=0.091 Sum_probs=38.8
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEe--ecCCCCH-HHHHHHHHcCCccc
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRI--IQGPWSP-MNIVQFVQRGIDMF 98 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRy--LmGvG~P-~dIl~aValGVDmF 98 (552)
++.+.+.|.+++.+.+... .+.+.++++.+.+. ..+.. +.++.+| +.+..+.++|+|++
T Consensus 70 ~~~~~~~Gad~v~v~~~~~---------~~~~~~~~~~~~~~---g~~~~v~~~~~~t~~~~~~~~~~~g~d~i 131 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTD---------VLTIQSCIRAAKEA---GKQVVVDMICVDDLPARVRLLEEAGADML 131 (211)
T ss_dssp HHHHHHTTCSEEEEETTSC---------HHHHHHHHHHHHHH---TCEEEEECTTCSSHHHHHHHHHHHTCCEE
T ss_pred HHHHHhcCCCEEEEeCCCC---------hhHHHHHHHHHHHc---CCeEEEEecCCCCHHHHHHHHHHcCCCEE
Confidence 6777889999999975442 24455666655543 23323 3567787 44778888999974
No 149
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=26.06 E-value=55 Score=30.00 Aligned_cols=75 Identities=12% Similarity=-0.030 Sum_probs=45.8
Q ss_pred HHHHHcCCcceEEEccccCCCCC---ccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccChhHH
Q psy15335 28 AELYATRDVHGFLIDGLCADEGA---TEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSGLPL 104 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~---~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv~Pt 104 (552)
++.+.+.+++.+.+|-+-+.+.. ...+. .+.+..+.+.++ +.|.++.|-=+|+++.++.+.|+|.++.....
T Consensus 129 ~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~----~~~l~~~~~~~~-~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i 203 (227)
T 2tps_A 129 VKQAEEDGADYVGLGPIYPTETKKDTRAVQG----VSLIEAVRRQGI-SIPIVGIGGITIDNAAPVIQAGADGVSMISAI 203 (227)
T ss_dssp HHHHHHHTCSEEEECCSSCCCSSSSCCCCCT----THHHHHHHHTTC-CCCEEEESSCCTTTSHHHHHTTCSEEEESHHH
T ss_pred HHHHHhCCCCEEEECCCcCCCCCCCCCCccC----HHHHHHHHHhCC-CCCEEEEcCCCHHHHHHHHHcCCCEEEEhHHh
Confidence 34455678999987643321100 01112 233444444444 57888765445999999999999999988766
Q ss_pred Hhh
Q psy15335 105 VLA 107 (552)
Q Consensus 105 r~A 107 (552)
..+
T Consensus 204 ~~~ 206 (227)
T 2tps_A 204 SQA 206 (227)
T ss_dssp HTS
T ss_pred hcC
Confidence 543
No 150
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=25.75 E-value=2e+02 Score=28.27 Aligned_cols=80 Identities=4% Similarity=-0.000 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCc--
Q psy15335 19 LDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGID-- 96 (552)
Q Consensus 19 ~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVD-- 96 (552)
+..+...+-++.|.+.|++-+-+|++.. ....+.| .+..+++..+.+. ++.|.-++- -...+|-.+++.|+|
T Consensus 27 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~-~~~~~~~--~d~~~~~~~~~~~--~~~~~~~l~-~~~~~i~~a~~aG~~~v 100 (302)
T 2ftp_A 27 IEVADKIRLVDDLSAAGLDYIEVGSFVS-PKWVPQM--AGSAEVFAGIRQR--PGVTYAALA-PNLKGFEAALESGVKEV 100 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECSC-TTTCGGG--TTHHHHHHHSCCC--TTSEEEEEC-CSHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcC-ccccccc--cCHHHHHHHhhhc--CCCEEEEEe-CCHHHHHHHHhCCcCEE
Confidence 5678888899999999999999987653 2222333 2334556555543 333433332 589999999999999
Q ss_pred -cccChhHH
Q psy15335 97 -MFDSGLPL 104 (552)
Q Consensus 97 -mFDcv~Pt 104 (552)
+||++++.
T Consensus 101 ~i~~~~s~~ 109 (302)
T 2ftp_A 101 AVFAAASEA 109 (302)
T ss_dssp EEEEESCHH
T ss_pred EEEEecCHH
Confidence 46777664
No 151
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=25.73 E-value=72 Score=30.57 Aligned_cols=61 Identities=16% Similarity=0.070 Sum_probs=43.6
Q ss_pred HHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccc
Q psy15335 27 CAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmF 98 (552)
-++++.+.|.+.++++.... . +++.+.++++.+.+. ....+..+.++++...+.++|+|++
T Consensus 93 ~i~~~~~~Gad~V~l~~~~~--~-----~p~~l~~~i~~~~~~----g~~v~~~v~t~eea~~a~~~Gad~I 153 (232)
T 3igs_A 93 DVDALAQAGAAIIAVDGTAR--Q-----RPVAVEALLARIHHH----HLLTMADCSSVDDGLACQRLGADII 153 (232)
T ss_dssp HHHHHHHHTCSEEEEECCSS--C-----CSSCHHHHHHHHHHT----TCEEEEECCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEEEECcccc--C-----CHHHHHHHHHHHHHC----CCEEEEeCCCHHHHHHHHhCCCCEE
Confidence 35667788999999886442 1 233456666666553 3445678999999999999999987
No 152
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=25.70 E-value=1.6e+02 Score=28.05 Aligned_cols=63 Identities=10% Similarity=-0.060 Sum_probs=38.0
Q ss_pred HHHHHcCCcceEEEc--cccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccc
Q psy15335 28 AELYATRDVHGFLID--GLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 28 A~eL~~l~f~GyaIG--Gl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmF 98 (552)
++.+.+.|++.+.+. |+...+. ....+ .+++..+.+. +.|... -|+.+|.++..+.++|+|-+
T Consensus 142 a~~a~~~Gad~Ig~~~~g~t~~~~-~~~~~----~~~i~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV 207 (232)
T 3igs_A 142 GLACQRLGADIIGTTMSGYTTPDT-PEEPD----LPLVKALHDA---GCRVIAEGRYNSPALAAEAIRYGAWAV 207 (232)
T ss_dssp HHHHHHTTCSEEECTTTTSSSSSC-CSSCC----HHHHHHHHHT---TCCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHhCCCCEEEEcCccCCCCCC-CCCCC----HHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHcCCCEE
Confidence 344557788877643 3322111 01112 2344444443 678775 67889999999999999954
No 153
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=25.67 E-value=1.8e+02 Score=27.79 Aligned_cols=62 Identities=8% Similarity=-0.112 Sum_probs=38.1
Q ss_pred HHHHcCCcceEEEc--cccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccc
Q psy15335 29 ELYATRDVHGFLID--GLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 29 ~eL~~l~f~GyaIG--Gl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmF 98 (552)
+.+.+.|++.+.+. |+...+. .. ..+ .+++..+.+. +.|... -|+.+|.++..+.++|+|-+
T Consensus 143 ~~a~~~Gad~Ig~~~~g~t~~~~-~~---~~~-~~li~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV 207 (229)
T 3q58_A 143 ISCHQKGIEFIGTTLSGYTGPIT-PV---EPD-LAMVTQLSHA---GCRVIAEGRYNTPALAANAIEHGAWAV 207 (229)
T ss_dssp HHHHHTTCSEEECTTTTSSSSCC-CS---SCC-HHHHHHHHTT---TCCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHhCCCCEEEecCccCCCCCc-CC---CCC-HHHHHHHHHc---CCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 34556788888643 3322110 00 111 2445555543 678776 67889999999999999954
No 154
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=25.57 E-value=1.6e+02 Score=30.28 Aligned_cols=63 Identities=10% Similarity=0.129 Sum_probs=47.4
Q ss_pred HHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccChhHHHhh
Q psy15335 31 YATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLA 107 (552)
Q Consensus 31 L~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv~Ptr~A 107 (552)
+.+.+.+++.++- |+.++|.+++..+. ..-+.-.-|==++..|....+.|||.|-....+..+
T Consensus 247 Al~aGaD~I~LDn----------~~~~~l~~av~~l~----~~v~ieaSGGIt~~~I~~~a~tGVD~isvGalt~sa 309 (320)
T 3paj_A 247 AISAGADIIMLDN----------FSLEMMREAVKINA----GRAALENSGNITLDNLKECAETGVDYISVGALTKHL 309 (320)
T ss_dssp HHHTTCSEEEEES----------CCHHHHHHHHHHHT----TSSEEEEESSCCHHHHHHHHTTTCSEEECTHHHHSB
T ss_pred HHHcCCCEEEECC----------CCHHHHHHHHHHhC----CCCeEEEECCCCHHHHHHHHHcCCCEEEECceecCC
Confidence 3446888888872 45677788777643 455666678779999999999999999888766544
No 155
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=25.45 E-value=60 Score=31.08 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=24.6
Q ss_pred HHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccc
Q psy15335 61 AVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 61 ~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmF 98 (552)
++++.+++ + ..| ++.|+.+|.++..|.++|+|.+
T Consensus 101 ~v~~~ar~-~--g~~-~i~Gv~t~~e~~~A~~~Gad~v 134 (224)
T 1vhc_A 101 KIVKLCQD-L--NFP-ITPGVNNPMAIEIALEMGISAV 134 (224)
T ss_dssp HHHHHHHH-T--TCC-EECEECSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHH-h--CCC-EEeccCCHHHHHHHHHCCCCEE
Confidence 44555554 2 233 4579999999999999999954
No 156
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=25.22 E-value=80 Score=31.62 Aligned_cols=69 Identities=10% Similarity=0.087 Sum_probs=51.2
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccChhHHHhh
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLA 107 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv~Ptr~A 107 (552)
++++.+.+.+.+.++= |+.+++.+.+..+.... +.-+...-|==+|..|....+.|||.|-....+..+
T Consensus 207 a~eal~aGaD~I~LDn----------~~~~~~~~~v~~l~~~~-~~v~ieaSGGIt~~~i~~~a~tGVD~isvG~l~~~a 275 (284)
T 1qpo_A 207 LDAVLPEKPELILLDN----------FAVWQTQTAVQRRDSRA-PTVMLESSGGLSLQTAATYAETGVDYLAVGALTHSV 275 (284)
T ss_dssp HHHHGGGCCSEEEEET----------CCHHHHHHHHHHHHHHC-TTCEEEEESSCCTTTHHHHHHTTCSEEECGGGTSSB
T ss_pred HHHHHHcCCCEEEECC----------CCHHHHHHHHHHhhccC-CCeEEEEECCCCHHHHHHHHhcCCCEEEECHHHcCC
Confidence 4444556888887762 56788888888776533 345677788779999999999999999887766544
No 157
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=24.84 E-value=62 Score=33.01 Aligned_cols=76 Identities=13% Similarity=0.020 Sum_probs=43.6
Q ss_pred HHHHHHHcCCcceEEEccccCCC-CCccc-----cC-hhHHHHHHHHhccCCCCCCcEeec--CCCCHHHHHHHHHcCCc
Q psy15335 26 YCAELYATRDVHGFLIDGLCADE-GATED-----LG-CDVVNAVLENTVPYLPNDKLRIIQ--GPWSPMNIVQFVQRGID 96 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~G-E~~~~-----m~-~eem~~iL~~v~~~LP~dKPRyLm--GvG~P~dIl~aValGVD 96 (552)
+-|+.+.+.|++++.++ .++.+ +.... .. ..-+.++.+.+.. .+.|.+ . ||.+|.+|+.|.++|.|
T Consensus 173 e~A~~a~~aGaD~I~v~-~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~---~~ipvI-a~GGI~~g~di~kAlalGA~ 247 (351)
T 2c6q_A 173 EMVEELILSGADIIKVG-IGPGSVCTTRKKTGVGYPQLSAVMECADAAHG---LKGHII-SDGGCSCPGDVAKAFGAGAD 247 (351)
T ss_dssp HHHHHHHHTTCSEEEEC-SSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHH---TTCEEE-EESCCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHhCCCEEEEC-CCCCcCcCccccCCCCccHHHHHHHHHHHHhh---cCCcEE-EeCCCCCHHHHHHHHHcCCC
Confidence 45667788999999885 22100 00000 00 1222333333221 135544 5 89999999999999999
Q ss_pred cccChhHHHh
Q psy15335 97 MFDSGLPLVL 106 (552)
Q Consensus 97 mFDcv~Ptr~ 106 (552)
..=...+...
T Consensus 248 ~V~vG~~fl~ 257 (351)
T 2c6q_A 248 FVMLGGMLAG 257 (351)
T ss_dssp EEEESTTTTT
T ss_pred ceeccHHHhc
Confidence 7655555443
No 158
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=24.64 E-value=1.1e+02 Score=29.96 Aligned_cols=41 Identities=7% Similarity=0.110 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhc
Q psy15335 23 LRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTV 67 (552)
Q Consensus 23 LR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~ 67 (552)
..++-++.+.++|++|+++|-|...| .++.+.+.++++.+.
T Consensus 77 ~M~~Di~~~~~~GadGvV~G~Lt~dg----~iD~~~~~~Li~~a~ 117 (224)
T 2bdq_A 77 IMEEDILRAVELESDALVLGILTSNN----HIDTEAIEQLLPATQ 117 (224)
T ss_dssp HHHHHHHHHHHTTCSEEEECCBCTTS----SBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEeeECCCC----CcCHHHHHHHHHHhC
Confidence 45567778889999999999887644 368899999998764
No 159
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=24.59 E-value=1.6e+02 Score=29.75 Aligned_cols=81 Identities=15% Similarity=0.050 Sum_probs=50.3
Q ss_pred ccCCCHHHHHHHHHHHHcCCcceEEEc--cccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC-CCCHHHHHHHHH
Q psy15335 16 QGGLDLSLRRYCAELYATRDVHGFLID--GLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG-PWSPMNIVQFVQ 92 (552)
Q Consensus 16 QGG~~~DLR~~SA~eL~~l~f~GyaIG--Gl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG-vG~P~dIl~aVa 92 (552)
.||...+.=.+-++.|.+.|++.+-+. +... .......+....+++..+++.+ +.|....| +.+|++..++++
T Consensus 233 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~--~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~a~~~l~ 308 (349)
T 3hgj_A 233 EGGWSLEDTLAFARRLKELGVDLLDCSSGGVVL--RVRIPLAPGFQVPFADAVRKRV--GLRTGAVGLITTPEQAETLLQ 308 (349)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCS--SSCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCc--ccccCCCccccHHHHHHHHHHc--CceEEEECCCCCHHHHHHHHH
Confidence 467777777778889999999998885 3321 1000000111233444444433 46777665 348999999999
Q ss_pred cC-CccccC
Q psy15335 93 RG-IDMFDS 100 (552)
Q Consensus 93 lG-VDmFDc 100 (552)
.| +|++=-
T Consensus 309 ~G~aD~V~i 317 (349)
T 3hgj_A 309 AGSADLVLL 317 (349)
T ss_dssp TTSCSEEEE
T ss_pred CCCceEEEe
Confidence 99 996543
No 160
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=24.50 E-value=95 Score=31.54 Aligned_cols=65 Identities=12% Similarity=0.157 Sum_probs=47.1
Q ss_pred HHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccChhHHHhh
Q psy15335 29 ELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLA 107 (552)
Q Consensus 29 ~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv~Ptr~A 107 (552)
+++.+.+.+++.++ | |+.+++.+.+..+ .+.-+...-|==++..|....+.|||.|-....+..+
T Consensus 223 ~eAl~aGaD~I~LD----n------~~~~~l~~av~~i----~~~v~ieaSGGI~~~~i~~~a~tGVD~isvG~lt~sa 287 (298)
T 3gnn_A 223 RTALAHGARSVLLD----N------FTLDMMRDAVRVT----EGRAVLEVSGGVNFDTVRAIAETGVDRISIGALTKDV 287 (298)
T ss_dssp HHHHHTTCEEEEEE----S------CCHHHHHHHHHHH----TTSEEEEEESSCSTTTHHHHHHTTCSEEECGGGGTSC
T ss_pred HHHHHcCCCEEEEC----C------CCHHHHHHHHHHh----CCCCeEEEEcCCCHHHHHHHHHcCCCEEEECCeecCC
Confidence 33445688888877 2 4567788888766 2344555677679999999999999999888765443
No 161
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=24.37 E-value=86 Score=31.99 Aligned_cols=78 Identities=15% Similarity=0.128 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHcCCcceEEEcccc---------C--------CCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCC-
Q psy15335 22 SLRRYCAELYATRDVHGFLIDGLC---------A--------DEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPW- 82 (552)
Q Consensus 22 DLR~~SA~eL~~l~f~GyaIGGl~---------v--------~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG- 82 (552)
+...++|+.+.+.||+|+=|-+-+ + .|.+.+. ...-+.++|+++++.++++ |.-+ +..+
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslen-r~r~~~eiv~avr~~vg~~-~v~vrls~~~ 238 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVEN-RARLVLEVVDAVCNEWSAD-RIGIRVSPIG 238 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHH-HTHHHHHHHHHHHHHSCGG-GEEEEECCSS
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhc-ChhhHHHHHHHHHHhcCCC-cEEEEEcccc
Confidence 566788888889999999984422 1 1112111 2345789999999999888 7766 2222
Q ss_pred ----------CHHH----HHHHHHcCCccccCh
Q psy15335 83 ----------SPMN----IVQFVQRGIDMFDSG 101 (552)
Q Consensus 83 ----------~P~d----Il~aValGVDmFDcv 101 (552)
++.+ +-.+.+.|+|.++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~ 271 (364)
T 1vyr_A 239 TFQNVDNGPNEEADALYLIEELAKRGIAYLHMS 271 (364)
T ss_dssp CBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred ccccccCCCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 2333 334557899998865
No 162
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=24.28 E-value=65 Score=31.49 Aligned_cols=58 Identities=10% Similarity=-0.007 Sum_probs=41.9
Q ss_pred eccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCC
Q psy15335 15 IQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPW 82 (552)
Q Consensus 15 VQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG 82 (552)
.-|--+++.-.+.++.+.+.|.+.+-|||-. | +..+.+.++|..+++ .+.|..||+=.
T Consensus 13 ~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~--G-----vt~~~~~~~v~~ir~---~~~Pivlm~y~ 70 (240)
T 1viz_A 13 FKLDPNKDLPDEQLEILCESGTDAVIIGGSD--G-----VTEDNVLRMMSKVRR---FLVPCVLEVSA 70 (240)
T ss_dssp EEECTTSCCCHHHHHHHHTSCCSEEEECC-----------CHHHHHHHHHHHTT---SSSCEEEECSC
T ss_pred EeeCCCccccHHHHHHHHHcCCCEEEECCCC--C-----CCHHHHHHHHHHhhC---cCCCEEEecCc
Confidence 3343334444556888999999999999833 2 356778999999987 48999999865
No 163
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=23.92 E-value=30 Score=37.80 Aligned_cols=50 Identities=14% Similarity=0.054 Sum_probs=34.4
Q ss_pred CCcccccHHHHHHHHHhhccccCccccc-----cCCccchh-hccCCCCceecccc
Q psy15335 277 GKNELSNTSDIYSSMESDIHQSTHQEAL-----IINTDDVA-SKSSEKDTLYTKSS 326 (552)
Q Consensus 277 G~lek~~~~~Iv~~~~~~LP~~kPrHL~-----Gi~P~dIf-aValGvDtFDcv~p 326 (552)
|.+...++.++|.++++.+|++.|.++. |....-.+ |+++|+|.||++..
T Consensus 199 G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~VD~ti~ 254 (539)
T 1rqb_A 199 ALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDTAIS 254 (539)
T ss_dssp CCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEEBCG
T ss_pred CCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCEEEEecc
Confidence 3445678899999999999855666553 22111122 79999999998664
No 164
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=23.73 E-value=99 Score=31.53 Aligned_cols=61 Identities=13% Similarity=0.172 Sum_probs=46.6
Q ss_pred cCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccChhHHHhh
Q psy15335 33 TRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLA 107 (552)
Q Consensus 33 ~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv~Ptr~A 107 (552)
+.|.+.+.+.- |+.++|.+.+..+.. .-..-.-|==+++.|....+.|||.|-..+.+..+
T Consensus 225 ~aGaDiImLDn----------~s~~~l~~av~~~~~----~v~leaSGGIt~~~i~~~A~tGVD~IsvGalthsa 285 (300)
T 3l0g_A 225 SNNVDMILLDN----------MSISEIKKAVDIVNG----KSVLEVSGCVNIRNVRNIALTGVDYISIGCITNSF 285 (300)
T ss_dssp HTTCSEEEEES----------CCHHHHHHHHHHHTT----SSEEEEESSCCTTTHHHHHTTTCSEEECGGGTSSC
T ss_pred HcCCCEEEECC----------CCHHHHHHHHHhhcC----ceEEEEECCCCHHHHHHHHHcCCCEEEeCccccCC
Confidence 45788888762 567888888887653 33455567669999999999999999998877655
No 165
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=23.60 E-value=1.9e+02 Score=29.45 Aligned_cols=79 Identities=11% Similarity=0.002 Sum_probs=46.1
Q ss_pred HHHHHHHcCCcceEEEccccCCCC--Cc---cccChhHHHHHHHHhccCCC-CCCcEee-cCCCCHHHHHHHHHcCCccc
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEG--AT---EDLGCDVVNAVLENTVPYLP-NDKLRII-QGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE--~~---~~m~~eem~~iL~~v~~~LP-~dKPRyL-mGvG~P~dIl~aValGVDmF 98 (552)
+-|+.+.+.|++++.+|+ .. |. .. ......+ .+.+..+.+.++ .+.|.+. =||.+|.++..++++|.|.+
T Consensus 206 ~~a~~a~~~Gad~I~vg~-~~-G~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V 282 (404)
T 1eep_A 206 EAALDLISVGADCLKVGI-GP-GSICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSV 282 (404)
T ss_dssp HHHHHHHTTTCSEEEECS-SC-STTSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHhcCCCEEEECC-CC-CcCcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHH
Confidence 456667789999999942 11 10 00 0000001 222333333222 2566654 37889999999999999988
Q ss_pred cChhHHHhh
Q psy15335 99 DSGLPLVLA 107 (552)
Q Consensus 99 Dcv~Ptr~A 107 (552)
=...+...+
T Consensus 283 ~iG~~~l~~ 291 (404)
T 1eep_A 283 MIGNLFAGT 291 (404)
T ss_dssp EECHHHHTB
T ss_pred hhCHHHhcC
Confidence 777666544
No 166
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=23.45 E-value=1.7e+02 Score=29.21 Aligned_cols=89 Identities=10% Similarity=0.034 Sum_probs=54.1
Q ss_pred CCceEEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccCh--hHHHHHHHHhccCCCCCCcEeecCC---C
Q psy15335 8 DTCVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGC--DVVNAVLENTVPYLPNDKLRIIQGP---W 82 (552)
Q Consensus 8 ~q~LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~--eem~~iL~~v~~~LP~dKPRyLmGv---G 82 (552)
+..+++-+-.|...+.-.+.+ .+.+++++.|-.-+++.--...-+. ..+.++|.++++.. +.|..+-++ .
T Consensus 116 ~~pv~~~i~~~~~~~~~~~~~---~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~--~~Pv~vK~~~~~~ 190 (349)
T 1p0k_A 116 NGLIFANLGSEATAAQAKEAV---EMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV--SVPVIVKEVGFGM 190 (349)
T ss_dssp SSCEEEEEETTCCHHHHHHHH---HHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC--SSCEEEEEESSCC
T ss_pred CceeEEeecCCCCHHHHHHHH---HhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc--CCCEEEEecCCCC
Confidence 345666666466666555443 3457888766422210000000011 12567788777665 689888654 6
Q ss_pred CHHHHHHHHHcCCccccCh
Q psy15335 83 SPMNIVQFVQRGIDMFDSG 101 (552)
Q Consensus 83 ~P~dIl~aValGVDmFDcv 101 (552)
++.++..+.+.|+|.++.+
T Consensus 191 ~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 191 SKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp CHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHcCCCEEEEc
Confidence 8999999999999998875
No 167
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=23.28 E-value=1.1e+02 Score=32.33 Aligned_cols=94 Identities=13% Similarity=0.191 Sum_probs=60.3
Q ss_pred EEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCC-------cccc----ChhHHHHHHHHhccCCCCCCcEee-c
Q psy15335 12 IAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGA-------TEDL----GCDVVNAVLENTVPYLPNDKLRII-Q 79 (552)
Q Consensus 12 fGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~-------~~~m----~~eem~~iL~~v~~~LP~dKPRyL-m 79 (552)
+.=|--+...+.-.+-|+.+.+.|++|+++-+-...... ..-+ .+..-.++|..+.+.++.+.|... =
T Consensus 273 ~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~G 352 (415)
T 3i65_A 273 FVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASG 352 (415)
T ss_dssp EEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECS
T ss_pred EEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 333444445444566778888899999987643210000 0000 123345777777788877888876 4
Q ss_pred CCCCHHHHHHHHHcCCccccChhHHH
Q psy15335 80 GPWSPMNIVQFVQRGIDMFDSGLPLV 105 (552)
Q Consensus 80 GvG~P~dIl~aValGVDmFDcv~Ptr 105 (552)
||-+++++.+++..|.|.+=...+..
T Consensus 353 GI~s~eDa~e~l~aGAd~VqIgra~l 378 (415)
T 3i65_A 353 GIFSGLDALEKIEAGASVCQLYSCLV 378 (415)
T ss_dssp SCCSHHHHHHHHHHTEEEEEESHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEEcHHHH
Confidence 67799999999999999776555544
No 168
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=23.15 E-value=2.6e+02 Score=22.58 Aligned_cols=40 Identities=13% Similarity=-0.030 Sum_probs=26.5
Q ss_pred HHHHHHHhccC-CCCCCcEee-cCCCCHHHHHHHHHcCCccc
Q psy15335 59 VNAVLENTVPY-LPNDKLRII-QGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 59 m~~iL~~v~~~-LP~dKPRyL-mGvG~P~dIl~aValGVDmF 98 (552)
-.+++..++.. .-++.|..+ -+-..+..+..+...|+|-|
T Consensus 66 g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~ 107 (144)
T 3kht_A 66 GFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSV 107 (144)
T ss_dssp HHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEE
Confidence 35566666552 223445554 56678999999999999854
No 169
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=23.04 E-value=55 Score=36.10 Aligned_cols=80 Identities=14% Similarity=0.051 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHcCCcceEEEcccc---------C--------CCCCccccChhHHHHHHHHhccCCCCCCcEee-c----
Q psy15335 22 SLRRYCAELYATRDVHGFLIDGLC---------A--------DEGATEDLGCDVVNAVLENTVPYLPNDKLRII-Q---- 79 (552)
Q Consensus 22 DLR~~SA~eL~~l~f~GyaIGGl~---------v--------~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-m---- 79 (552)
+.=.++|+.+.+.||+|+=|=|-+ + .|.+.+. ...-+.++|+++++.++++.|..+ +
T Consensus 149 ~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~en-R~r~~~eiv~avr~~vg~~~pv~vrls~~~ 227 (729)
T 1o94_A 149 QFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLEN-RARFWLETLEKVKHAVGSDCAIATRFGVDT 227 (729)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHH-HTHHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHH-HhHHHHHHHHHHHHHhCCCceEEEEEcccc
Confidence 455678888888999999885544 1 1222221 245688999999999999998665 3
Q ss_pred -----CCC---CHHHHHHHHHcCCccccChh
Q psy15335 80 -----GPW---SPMNIVQFVQRGIDMFDSGL 102 (552)
Q Consensus 80 -----GvG---~P~dIl~aValGVDmFDcv~ 102 (552)
|.- ....+..+++.|+|+++.++
T Consensus 228 ~~~~~G~~~~~~~~~~~~~l~~~~d~~~v~~ 258 (729)
T 1o94_A 228 VYGPGQIEAEVDGQKFVEMADSLVDMWDITI 258 (729)
T ss_dssp SSCTTSCCTTTHHHHHHHHHGGGCSEEEEEE
T ss_pred CcCCCCCCchHHHHHHHHHHHhhcCEEEEee
Confidence 222 34557777777999998766
No 170
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=22.67 E-value=88 Score=33.91 Aligned_cols=76 Identities=17% Similarity=0.212 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCcceEEEccccCC-----------------CCCccccChhHHHHHHHHhccCCCCCCcEee--------c
Q psy15335 25 RYCAELYATRDVHGFLIDGLCAD-----------------EGATEDLGCDVVNAVLENTVPYLPNDKLRII--------Q 79 (552)
Q Consensus 25 ~~SA~eL~~l~f~GyaIGGl~v~-----------------GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL--------m 79 (552)
.++|+.+.+.||+|+=|=+-+.. |.+.+. ...-+.++|+++++.+++++|..+ .
T Consensus 144 ~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~-r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~ 222 (671)
T 1ps9_A 144 ARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRN-RMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVE 222 (671)
T ss_dssp HHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHH-HHHHHHHHHHHHHHHHCSSSEEEEEEEEECCST
T ss_pred HHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHH-HHHHHHHHHHHHHHHcCCCceEEEEECccccCC
Q ss_pred CCCCHHHHHHHH----HcCCccccCh
Q psy15335 80 GPWSPMNIVQFV----QRGIDMFDSG 101 (552)
Q Consensus 80 GvG~P~dIl~aV----alGVDmFDcv 101 (552)
|-.++.+.+.++ +.|+|.++.+
T Consensus 223 ~g~~~~~~~~~a~~l~~~g~d~i~v~ 248 (671)
T 1ps9_A 223 DGGTFAETVELAQAIEAAGATIINTG 248 (671)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEcC
No 171
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=22.32 E-value=1.2e+02 Score=30.15 Aligned_cols=64 Identities=14% Similarity=0.062 Sum_probs=47.8
Q ss_pred HHHHHHcCCcceEEEccccC---CC-CCccccChhHHHHHHHHhccCCCCCCcEee---cCCC-CHHHHHHHHH
Q psy15335 27 CAELYATRDVHGFLIDGLCA---DE-GATEDLGCDVVNAVLENTVPYLPNDKLRII---QGPW-SPMNIVQFVQ 92 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~v---~G-E~~~~m~~eem~~iL~~v~~~LP~dKPRyL---mGvG-~P~dIl~aVa 92 (552)
||+.+.+.||+.+.+||.++ .| +.+..+..++|...+..+....+ .|... +|.| .|.++...|.
T Consensus 28 sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~--~pviaD~d~Gyg~~~~~~~~~v~ 99 (275)
T 2ze3_A 28 SARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVA--IPVNADIEAGYGHAPEDVRRTVE 99 (275)
T ss_dssp HHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCS--SCEEEECTTCSSSSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcC--CCEEeecCCCCCCCHHHHHHHHH
Confidence 67777788999999997531 23 33345678999999998888776 68777 7887 7988776654
No 172
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=22.31 E-value=1.4e+02 Score=29.80 Aligned_cols=81 Identities=14% Similarity=0.005 Sum_probs=48.9
Q ss_pred cCCC--HHHHHHHHHHHHcCCcceEEEccccCCCCCcccc-ChhH---HHHHHHHhccCCCCCCcEeecCCCCHHHHHHH
Q psy15335 17 GGLD--LSLRRYCAELYATRDVHGFLIDGLCADEGATEDL-GCDV---VNAVLENTVPYLPNDKLRIIQGPWSPMNIVQF 90 (552)
Q Consensus 17 GG~~--~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m-~~ee---m~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~a 90 (552)
||.+ .+.=.+-|+++.+-|.+-+=|||-+. ....+.. ..++ +.++|+.+.+. +.|.-+ =-.+|.-+-.|
T Consensus 22 gg~~~~~~~a~~~a~~~v~~GAdiIDIGgest-rpga~~v~~~eE~~Rv~pvi~~l~~~---~~piSI-DT~~~~va~aA 96 (280)
T 1eye_A 22 GGCYLDLDDAVKHGLAMAAAGAGIVDVGGESS-RPGATRVDPAVETSRVIPVVKELAAQ---GITVSI-DTMRADVARAA 96 (280)
T ss_dssp SCCCCSHHHHHHHHHHHHHTTCSEEEEECC---------------HHHHHHHHHHHHHT---TCCEEE-ECSCHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHCCCCEEEECCccC-CCCCCCCCHHHHHHHHHHHHHHhhcC---CCEEEE-eCCCHHHHHHH
Confidence 6654 34444456777788999999998653 1111111 1344 44555555443 677765 44899999999
Q ss_pred HHcCCccccChh
Q psy15335 91 VQRGIDMFDSGL 102 (552)
Q Consensus 91 ValGVDmFDcv~ 102 (552)
++.|.|++-+++
T Consensus 97 l~aGa~iINdvs 108 (280)
T 1eye_A 97 LQNGAQMVNDVS 108 (280)
T ss_dssp HHTTCCEEEETT
T ss_pred HHcCCCEEEECC
Confidence 999999886665
No 173
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=22.30 E-value=65 Score=31.29 Aligned_cols=23 Identities=17% Similarity=0.268 Sum_probs=21.4
Q ss_pred EeecCCCCHHHHHHHHHcCCccc
Q psy15335 76 RIIQGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 76 RyLmGvG~P~dIl~aValGVDmF 98 (552)
.++.|+.+|.++..|.++|.|++
T Consensus 114 ~~~PG~~TptE~~~A~~~Gad~v 136 (217)
T 3lab_A 114 VFLPGVATASEVMIAAQAGITQL 136 (217)
T ss_dssp EEEEEECSHHHHHHHHHTTCCEE
T ss_pred eEeCCCCCHHHHHHHHHcCCCEE
Confidence 47789999999999999999988
No 174
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=21.93 E-value=1.3e+02 Score=30.04 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecC----CCCHHH-HHHHHHcCCc
Q psy15335 22 SLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQG----PWSPMN-IVQFVQRGID 96 (552)
Q Consensus 22 DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmG----vG~P~d-Il~aValGVD 96 (552)
+..++-++.+.++|++|+++|-|...|. ++.+.+.++++.+.+ + |.-++= +-+|.. +-.++.+|||
T Consensus 73 ~~M~~Di~~~~~~GadGvV~G~Lt~dg~----iD~~~~~~Li~~a~~-~----~vTFHRAfD~~~d~~~ale~L~~lG~~ 143 (256)
T 1twd_A 73 AAILEDVRTVRELGFPGLVTGVLDVDGN----VDMPRMEKIMAAAGP-L----AVTFHRAFDMCANPLYTLNNLAELGIA 143 (256)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCBCTTSS----BCHHHHHHHHHHHTT-S----EEEECGGGGGCSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEeeECCCCC----cCHHHHHHHHHHhCC-C----cEEEECchhccCCHHHHHHHHHHcCCC
Confidence 3455677788899999999998876443 688999999987652 2 332221 224443 4456778877
No 175
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=21.74 E-value=1.5e+02 Score=28.57 Aligned_cols=44 Identities=20% Similarity=0.207 Sum_probs=32.1
Q ss_pred HHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccChhHH
Q psy15335 59 VNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSGLPL 104 (552)
Q Consensus 59 m~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv~Pt 104 (552)
+.+.|..+++.. +.|..+ +|+.+|+++..++..|.|.+=.-+..
T Consensus 193 ~~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai 237 (268)
T 1qop_A 193 LHHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGAISGSAI 237 (268)
T ss_dssp CHHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 345555555554 578776 88889999999999999977554443
No 176
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=21.71 E-value=3.2e+02 Score=28.22 Aligned_cols=75 Identities=13% Similarity=0.052 Sum_probs=46.4
Q ss_pred HHHHHHcCCcceEEEccccCCCCCcc--c---cChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCccccC
Q psy15335 27 CAELYATRDVHGFLIDGLCADEGATE--D---LGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDS 100 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~v~GE~~~--~---m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDc 100 (552)
-|+.+.+.|++++.+| .++ |.... . .... ..+.|..+..... |... =||.+|.++..++++|.|.+=.
T Consensus 154 ~A~~a~~aGaD~I~Vg-~g~-G~~~~tr~~~g~g~p-~l~aI~~~~~~~~---PVIAdGGI~~~~di~kALa~GAd~V~i 227 (361)
T 3r2g_A 154 GADYLASCGADIIKAG-IGG-GSVCSTRIKTGFGVP-MLTCIQDCSRADR---SIVADGGIKTSGDIVKALAFGADFVMI 227 (361)
T ss_dssp HHHHHHHTTCSEEEEC-CSS-SSCHHHHHHHCCCCC-HHHHHHHHTTSSS---EEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEEc-CCC-CcCccccccCCccHH-HHHHHHHHHHhCC---CEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 4677888999999995 332 21100 0 0001 2445555555543 7665 3788999999999999997655
Q ss_pred hhHHHhh
Q psy15335 101 GLPLVLA 107 (552)
Q Consensus 101 v~Ptr~A 107 (552)
..+...+
T Consensus 228 Gr~f~~t 234 (361)
T 3r2g_A 228 GGMLAGS 234 (361)
T ss_dssp SGGGTTB
T ss_pred ChHHhCC
Confidence 5544433
No 177
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=21.67 E-value=1.8e+02 Score=29.08 Aligned_cols=63 Identities=11% Similarity=0.061 Sum_probs=47.6
Q ss_pred HHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccccChhHHHhh
Q psy15335 31 YATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMFDSGLPLVLA 107 (552)
Q Consensus 31 L~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmFDcv~Ptr~A 107 (552)
+.+.+.+.+.++- |..+++.+.++.+. ...|....|==+|+.+....+.|||.+=....+..+
T Consensus 212 A~~aGaD~I~ld~----------~~~~~~k~av~~v~----~~ipi~AsGGIt~eni~~~a~tGvD~IsVgs~~~~a 274 (286)
T 1x1o_A 212 ALEAGADLILLDN----------FPLEALREAVRRVG----GRVPLEASGNMTLERAKAAAEAGVDYVSVGALTHSA 274 (286)
T ss_dssp HHHHTCSEEEEES----------CCHHHHHHHHHHHT----TSSCEEEESSCCHHHHHHHHHHTCSEEECTHHHHSC
T ss_pred HHHcCCCEEEECC----------CCHHHHHHHHHHhC----CCCeEEEEcCCCHHHHHHHHHcCCCEEEEcHHHcCC
Confidence 3345788888873 34566777776654 356888888779999999999999999887766654
No 178
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=21.55 E-value=2.3e+02 Score=28.50 Aligned_cols=63 Identities=6% Similarity=-0.108 Sum_probs=36.0
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCcc
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDM 97 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDm 97 (552)
++.+++++.+...--|... |......+++-+ ..+++. .+-|... =||++|.++..+.++|+|-
T Consensus 149 akrl~~~G~~aVmPlg~pI-GsG~Gi~~~~lI----~~I~e~--~~vPVI~eGGI~TPsDAa~AmeLGAdg 212 (265)
T 1wv2_A 149 ARQLAEIGCIAVMPLAGLI-GSGLGICNPYNL----RIILEE--AKVPVLVDAGVGTASDAAIAMELGCEA 212 (265)
T ss_dssp HHHHHHSCCSEEEECSSST-TCCCCCSCHHHH----HHHHHH--CSSCBEEESCCCSHHHHHHHHHHTCSE
T ss_pred HHHHHHhCCCEEEeCCccC-CCCCCcCCHHHH----HHHHhc--CCCCEEEeCCCCCHHHHHHHHHcCCCE
Confidence 4455566666655422211 211112233333 333332 2456666 4999999999999999994
No 179
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=21.52 E-value=1.2e+02 Score=30.57 Aligned_cols=64 Identities=17% Similarity=0.100 Sum_probs=42.7
Q ss_pred HHHHHHcCCcceEEEccccC---CC-CCccccChhHHHHHHHHhccCCCCCCcEee---cCCCCHHHHHHHHH
Q psy15335 27 CAELYATRDVHGFLIDGLCA---DE-GATEDLGCDVVNAVLENTVPYLPNDKLRII---QGPWSPMNIVQFVQ 92 (552)
Q Consensus 27 SA~eL~~l~f~GyaIGGl~v---~G-E~~~~m~~eem~~iL~~v~~~LP~dKPRyL---mGvG~P~dIl~aVa 92 (552)
||+.+.+.||+.+.+||.+. .| +.+..+..++|...+..+....+ .|... +|.|.|.++...|.
T Consensus 31 sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~--~PviaD~d~Gyg~~~~v~~~v~ 101 (295)
T 1s2w_A 31 SARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASD--VPILLDADTGYGNFNNARRLVR 101 (295)
T ss_dssp HHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCS--SCEEEECCSSCSSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCC--CCEEecCCCCCCCHHHHHHHHH
Confidence 67777788999999998631 23 22334567888888888887764 78655 78889887776544
No 180
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=21.12 E-value=2e+02 Score=29.57 Aligned_cols=75 Identities=7% Similarity=-0.112 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCc--
Q psy15335 19 LDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGID-- 96 (552)
Q Consensus 19 ~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVD-- 96 (552)
+..+...+-++.|.+.|++-+=+|+... ..++.+.++.+....+. .+...+.-+.+.+|-.+++.|+|
T Consensus 22 ~~~~~k~~ia~~L~~~Gv~~IE~g~p~~---------~~~~~~~~~~i~~~~~~-~~v~~~~r~~~~di~~a~~~g~~~v 91 (382)
T 2ztj_A 22 FSTQDKVEIAKALDEFGIEYIEVTTPVA---------SPQSRKDAEVLASLGLK-AKVVTHIQCRLDAAKVAVETGVQGI 91 (382)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCTTS---------CHHHHHHHHHHHTSCCS-SEEEEEEESCHHHHHHHHHTTCSEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEcCCcC---------CHHHHHHHHHHHhcCCC-cEEEEEcccChhhHHHHHHcCCCEE
Confidence 5678888899999999999988875321 23345555555554333 33333455679999999999999
Q ss_pred -cccChhH
Q psy15335 97 -MFDSGLP 103 (552)
Q Consensus 97 -mFDcv~P 103 (552)
+|+++++
T Consensus 92 ~i~~~~s~ 99 (382)
T 2ztj_A 92 DLLFGTSK 99 (382)
T ss_dssp EEEECC--
T ss_pred EEEeccCH
Confidence 5555554
No 181
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=21.01 E-value=2.2e+02 Score=30.56 Aligned_cols=81 Identities=12% Similarity=0.093 Sum_probs=51.7
Q ss_pred HHHHHHHcCCcceEEEccccCCCCCcccc--ChhHHHHHHHHhcc-CCCCCCcEee-cCCCCHHHHHHHHHcCCccccCh
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGATEDL--GCDVVNAVLENTVP-YLPNDKLRII-QGPWSPMNIVQFVQRGIDMFDSG 101 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~~~~m--~~eem~~iL~~v~~-~LP~dKPRyL-mGvG~P~dIl~aValGVDmFDcv 101 (552)
+-|+.+.+.|++++.++| +. |-....- ..+.+.++.+.+.. .+..+.|.+. =||-++.+++.++++|.|..=..
T Consensus 355 e~A~~a~~aGad~I~vs~-hg-G~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iG 432 (511)
T 1kbi_A 355 EDVIKAAEIGVSGVVLSN-HG-GRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLG 432 (511)
T ss_dssp HHHHHHHHTTCSEEEECC-TT-TTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEcC-CC-CccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 447778889999999976 32 2111000 11233333333321 2234567776 46789999999999999988888
Q ss_pred hHHHhhc
Q psy15335 102 LPLVLAD 108 (552)
Q Consensus 102 ~Ptr~AR 108 (552)
.|..++.
T Consensus 433 r~~l~~~ 439 (511)
T 1kbi_A 433 RPFLYAN 439 (511)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877653
No 182
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=21.00 E-value=1.8e+02 Score=30.90 Aligned_cols=69 Identities=10% Similarity=-0.079 Sum_probs=42.1
Q ss_pred HHHHHHHcCCcceEEEccccCCCCCcc-c-----c-ChhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCcc
Q psy15335 26 YCAELYATRDVHGFLIDGLCADEGATE-D-----L-GCDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDM 97 (552)
Q Consensus 26 ~SA~eL~~l~f~GyaIGGl~v~GE~~~-~-----m-~~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDm 97 (552)
+.|+.+.+.|++++.+|+-.. +.-.. . . ....+.++.+.+.. .+.|... -|+.+|.+|..+.++|.|.
T Consensus 284 e~a~~l~~aGaD~I~Vg~g~G-s~~~tr~~~g~g~p~~~~i~~v~~~~~~---~~iPVIa~GGI~~~~di~kala~GAd~ 359 (496)
T 4fxs_A 284 EGARALIEAGVSAVKVGIGPG-SICTTRIVTGVGVPQITAIADAAGVANE---YGIPVIADGGIRFSGDISKAIAAGASC 359 (496)
T ss_dssp HHHHHHHHHTCSEEEECSSCC-TTBCHHHHHCCCCCHHHHHHHHHHHHGG---GTCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCEEEECCCCC-cCcccccccCCCccHHHHHHHHHHHhcc---CCCeEEEeCCCCCHHHHHHHHHcCCCe
Confidence 346777888999999973211 11000 0 0 12333444444332 2577765 4899999999999999984
Q ss_pred c
Q psy15335 98 F 98 (552)
Q Consensus 98 F 98 (552)
.
T Consensus 360 V 360 (496)
T 4fxs_A 360 V 360 (496)
T ss_dssp E
T ss_pred E
Confidence 3
No 183
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=20.93 E-value=73 Score=30.42 Aligned_cols=68 Identities=12% Similarity=-0.005 Sum_probs=36.2
Q ss_pred HHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCH-HHHHHHHHcCCccccCh
Q psy15335 23 LRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSP-MNIVQFVQRGIDMFDSG 101 (552)
Q Consensus 23 LR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P-~dIl~aValGVDmFDcv 101 (552)
+-.+-++...+.|++|++.++. ..+++ ..+++..|++-+....|||-- .+. ++++.|.|.+=..
T Consensus 138 ~~~~~a~~a~~~G~~GvV~~at----------~~~e~----~~ir~~~~~~~~iv~PGI~~~g~~p-~~~~aGad~iVvG 202 (228)
T 3m47_A 138 AADEIARMGVDLGVKNYVGPST----------RPERL----SRLREIIGQDSFLISPGVGAQGGDP-GETLRFADAIIVG 202 (228)
T ss_dssp HHHHHHHHHHHTTCCEEECCSS----------CHHHH----HHHHHHHCSSSEEEECC----------CGGGTCSEEEEC
T ss_pred HHHHHHHHHHHhCCcEEEECCC----------ChHHH----HHHHHhcCCCCEEEecCcCcCCCCH-hHHHcCCCEEEEC
Confidence 3345556666788888886631 12222 333344566677766788732 145 8889999965544
Q ss_pred hHHH
Q psy15335 102 LPLV 105 (552)
Q Consensus 102 ~Ptr 105 (552)
.|..
T Consensus 203 r~I~ 206 (228)
T 3m47_A 203 RSIY 206 (228)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4443
No 184
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=20.88 E-value=88 Score=32.75 Aligned_cols=75 Identities=15% Similarity=0.020 Sum_probs=44.0
Q ss_pred HHHHHcCCcceEEEccccCCC-CCccc-----cC-hhHHHHHHHHhccCCCCCCcEee-cCCCCHHHHHHHHHcCCcccc
Q psy15335 28 AELYATRDVHGFLIDGLCADE-GATED-----LG-CDVVNAVLENTVPYLPNDKLRII-QGPWSPMNIVQFVQRGIDMFD 99 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~G-E~~~~-----m~-~eem~~iL~~v~~~LP~dKPRyL-mGvG~P~dIl~aValGVDmFD 99 (552)
++.+.+.|++++.+|+ ..++ ..... .. ...+.++.+.+ +. .+.|... =|+.+|.++..++++|.|.+=
T Consensus 292 a~~l~~~G~d~I~v~~-~~G~~~~~~~~~~~g~p~~~~l~~v~~~~-~~--~~ipvia~GGI~~~~di~kala~GAd~V~ 367 (494)
T 1vrd_A 292 TEALIKAGADAVKVGV-GPGSICTTRVVAGVGVPQLTAVMECSEVA-RK--YDVPIIADGGIRYSGDIVKALAAGAESVM 367 (494)
T ss_dssp HHHHHHTTCSEEEECS-SCSTTCHHHHHHCCCCCHHHHHHHHHHHH-HT--TTCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHcCCCEEEEcC-CCCccccccccCCCCccHHHHHHHHHHHH-hh--cCCCEEEECCcCCHHHHHHHHHcCCCEEE
Confidence 5677789999999953 2100 00000 01 11222222222 11 1566664 388899999999999999877
Q ss_pred ChhHHHh
Q psy15335 100 SGLPLVL 106 (552)
Q Consensus 100 cv~Ptr~ 106 (552)
...|...
T Consensus 368 iGr~~l~ 374 (494)
T 1vrd_A 368 VGSIFAG 374 (494)
T ss_dssp ESHHHHT
T ss_pred ECHHHhc
Confidence 7776653
No 185
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=20.85 E-value=1.9e+02 Score=30.89 Aligned_cols=105 Identities=11% Similarity=0.067 Sum_probs=66.0
Q ss_pred CCceEEee--------ccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccC-hhHHHH---HHHHhccC---CCC
Q psy15335 8 DTCVIAPI--------QGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLG-CDVVNA---VLENTVPY---LPN 72 (552)
Q Consensus 8 ~q~LfGIV--------QGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~-~eem~~---iL~~v~~~---LP~ 72 (552)
...++||+ -||...+.-.+-|+++.+-|.+-+=|||-+. ....+.++ .+|+.+ +|+.+.+. +|.
T Consensus 190 ~~~vMGIlNvTPDSFsDgg~~~~~al~~A~~mv~~GAdIIDIGgeST-rPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~ 268 (442)
T 3mcm_A 190 NTIRMGIVNLSNQSFSDGNFDDNQRKLNLDELIQSGAEIIDIGAEST-KPDAKPISIEEEFNKLNEFLEYFKSQLANLIY 268 (442)
T ss_dssp SSEEEEEEECSSCC-CCCSSCCCHHHHHHHHHHHHTCSEEEEECCCC-CC----CCHHHHHHHHHHHHHHHHHHTTTCSS
T ss_pred CceEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC-CCCCCCCCHHHHHHHHHHHHHHHHhhccccCC
Confidence 45567776 3666666666677778888999999998664 11112222 355555 46666552 333
Q ss_pred CCcEeecCCCCHHHHHHHHH--cCCcc-ccCh-------hHHHhhccCeEEe
Q psy15335 73 DKLRIIQGPWSPMNIVQFVQ--RGIDM-FDSG-------LPLVLADRGCAFT 114 (552)
Q Consensus 73 dKPRyLmGvG~P~dIl~aVa--lGVDm-FDcv-------~Ptr~AR~G~aLT 114 (552)
+.|.- .=-.+|.-+-+|++ .|.|| +-++ ..-..|+.|..++
T Consensus 269 ~vpIS-IDT~~~~VaeaAL~~~aGa~i~INDVsg~~d~~m~~v~a~~g~~vV 319 (442)
T 3mcm_A 269 KPLVS-IDTRKLEVMQKILAKHHDIIWMINDVECNNIEQKAQLIAKYNKKYV 319 (442)
T ss_dssp CCEEE-EECCCHHHHHHHHHHHGGGCCEEEECCCTTHHHHHHHHHHHTCEEE
T ss_pred CCeEE-EeCCCHHHHHHHHhhCCCCCEEEEcCCCCCChHHHHHHHHhCCeEE
Confidence 66765 44478999999999 99999 4333 3344556665555
No 186
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=20.67 E-value=1.2e+02 Score=27.59 Aligned_cols=53 Identities=11% Similarity=0.213 Sum_probs=0.0
Q ss_pred HHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHHHHHHcCCccc
Q psy15335 28 AELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIVQFVQRGIDMF 98 (552)
Q Consensus 28 A~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl~aValGVDmF 98 (552)
++.+.+.|.+++.+|... .++++..... ....+.|+.+|.++..+...|+|.+
T Consensus 73 i~~a~~~Gad~V~~~~~~--------------~~~~~~~~~~----g~~~~~g~~t~~e~~~a~~~G~d~v 125 (212)
T 2v82_A 73 VDALARMGCQLIVTPNIH--------------SEVIRRAVGY----GMTVCPGCATATEAFTALEAGAQAL 125 (212)
T ss_dssp HHHHHHTTCCEEECSSCC--------------HHHHHHHHHT----TCEEECEECSHHHHHHHHHTTCSEE
T ss_pred HHHHHHcCCCEEEeCCCC--------------HHHHHHHHHc----CCCEEeecCCHHHHHHHHHCCCCEE
No 187
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=20.49 E-value=71 Score=32.27 Aligned_cols=79 Identities=13% Similarity=0.019 Sum_probs=45.4
Q ss_pred CCHHHHHHHHH-HHHcCCcceEEEccccCCCCCccccChhHHHHHHHH--hccCCCCCCcEeecCCCCHHHHHHHHHcCC
Q psy15335 19 LDLSLRRYCAE-LYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLEN--TVPYLPNDKLRIIQGPWSPMNIVQFVQRGI 95 (552)
Q Consensus 19 ~~~DLR~~SA~-eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~--v~~~LP~dKPRyLmGvG~P~dIl~aValGV 95 (552)
+..+...+-++ .|.+.|++-+=+|++.. .+. +.+.+..+.+. +.+.+| +...-.+.-+.. +|-.+++.|+
T Consensus 38 ~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~-~~~----~~~~v~~~~~~~~~~~~~~-~~~i~~l~~~~~-~i~~a~~~g~ 110 (337)
T 3ble_A 38 FSTSEKLNIAKFLLQKLNVDRVEIASARV-SKG----ELETVQKIMEWAATEQLTE-RIEILGFVDGNK-TVDWIKDSGA 110 (337)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEETTS-CTT----HHHHHHHHHHHHHHTTCGG-GEEEEEESSTTH-HHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCCC-Chh----HHHHHHHHHhhhhhhccCC-CCeEEEEccchh-hHHHHHHCCC
Confidence 56777888899 99999999999987664 121 11222222221 111332 222223444444 8888899998
Q ss_pred cc---ccChhHH
Q psy15335 96 DM---FDSGLPL 104 (552)
Q Consensus 96 Dm---FDcv~Pt 104 (552)
|. |+++++.
T Consensus 111 ~~v~i~~~~s~~ 122 (337)
T 3ble_A 111 KVLNLLTKGSLH 122 (337)
T ss_dssp CEEEEEEECSHH
T ss_pred CEEEEEEecCHH
Confidence 84 4444443
No 188
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=20.40 E-value=1.2e+02 Score=33.41 Aligned_cols=79 Identities=11% Similarity=0.027 Sum_probs=59.9
Q ss_pred CceEEeeccCCCHHHHHHHHHHHHcCCcceEEEccccCCCCCccccChhHHHHHHHHhccCCCCCCcEeecCCCCHHHHH
Q psy15335 9 TCVIAPIQGGLDLSLRRYCAELYATRDVHGFLIDGLCADEGATEDLGCDVVNAVLENTVPYLPNDKLRIIQGPWSPMNIV 88 (552)
Q Consensus 9 q~LfGIVQGG~~~DLR~~SA~eL~~l~f~GyaIGGl~v~GE~~~~m~~eem~~iL~~v~~~LP~dKPRyLmGvG~P~dIl 88 (552)
+.++|.-.| ...|-+.+ ++.|.+.+++-++|..-++ ..+-+.+++.++....| +.|...-.+.+++...
T Consensus 269 rL~VgAAVg-v~~d~~eR-~~aLv~AGvD~iviD~ahG--------hs~~v~~~i~~ik~~~p-~~~viaGNVaT~e~a~ 337 (556)
T 4af0_A 269 QLYCGAAIG-TRPGDKDR-LKLLAEAGLDVVVLDSSQG--------NSVYQIEFIKWIKQTYP-KIDVIAGNVVTREQAA 337 (556)
T ss_dssp CBCCEEEEC-SSHHHHHH-HHHHHHTTCCEEEECCSCC--------CSHHHHHHHHHHHHHCT-TSEEEEEEECSHHHHH
T ss_pred ceeeEEEec-cCccHHHH-HHHHHhcCCcEEEEecccc--------ccHHHHHHHHHHHhhCC-cceEEeccccCHHHHH
Confidence 455666665 34454443 4557788999999997664 34556888888888774 7888889999999999
Q ss_pred HHHHcCCccc
Q psy15335 89 QFVQRGIDMF 98 (552)
Q Consensus 89 ~aValGVDmF 98 (552)
.++..|+|.+
T Consensus 338 ~Li~aGAD~v 347 (556)
T 4af0_A 338 QLIAAGADGL 347 (556)
T ss_dssp HHHHHTCSEE
T ss_pred HHHHcCCCEE
Confidence 9999999974
Done!