RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15337
(93 letters)
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase,
phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Length = 253
Score = 112 bits (282), Expect = 2e-32
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+ VHCSAG GRTGTF AL TVL+R+ + G +D+ + V LR QR MVQ+L QY +
Sbjct: 179 ITVHCSAGAGRTGTFCALSTVLERV---KAEGILDVFQTVKSLRLQRPHMVQTLEQYEFC 235
Query: 61 YECVQVYLQG 70
Y+ VQ Y+
Sbjct: 236 YKVVQEYIDA 245
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A
{Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Length = 342
Score = 113 bits (285), Expect = 2e-32
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
++VHCSAGVGRTGTFIA+D ++ ++ E +VD+ IV+ LR R LMVQ+ QYV++
Sbjct: 240 ILVHCSAGVGRTGTFIAIDRLIYQI---ENENTVDVYGIVYDLRMHRPLMVQTEDQYVFL 296
Query: 61 YECVQVYLQGG--VRHERQIQNNEAIERDEGVDDL 93
+CV ++ + + QN A+ E ++ +
Sbjct: 297 NQCVLDIIRAQKDSKVDLIYQNTTAMTIYENLERV 331
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine
phosphatase, lymphoid phosphatase, PEP, LYP, struct
genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A
2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Length = 309
Score = 112 bits (283), Expect = 4e-32
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+ +HCSAG GRTG A+D L + + + ++ +R QR +VQ+ QY +
Sbjct: 223 ICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELV 282
Query: 61 YECVQVYLQGG 71
Y V +
Sbjct: 283 YNAVLELFKRQ 293
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 115 bits (289), Expect = 6e-32
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
++VH SAG+GRTGT I +D +++ + +DI + + +R QR MVQ+ AQY +I
Sbjct: 449 IIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFI 508
Query: 61 YECVQVYLQGGVRHERQIQNNEAIERD 87
Y + +++ + +Q+ + E +
Sbjct: 509 YVAIAQFIETTKKKLEVLQSQKGQESE 535
Score = 56.9 bits (137), Expect = 3e-11
Identities = 10/65 (15%), Positives = 15/65 (23%), Gaps = 3/65 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+ V C G G D++ + E I R + I
Sbjct: 167 IKVMCEGGRYTVGGLETFDSLTDLV---EHFKKTGIEEASGAFVYLRQPYYATRVNAADI 223
Query: 61 YECVQ 65
V
Sbjct: 224 ENRVL 228
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R;
PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase;
1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Length = 297
Score = 111 bits (281), Expect = 6e-32
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVHCSAG+GRTG FIA Q+L + G VD L IV LR R MVQ+ QY ++
Sbjct: 225 VVVHCSAGIGRTGCFIATSIGCQQL---KEEGVVDALSIVCQLRVDRGGMVQTSEQYEFV 281
Query: 61 YECVQVYLQ 69
+ + ++
Sbjct: 282 HHALCLFES 290
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis,
signal transduction, developm protein, hydrolase; 2.40A
{Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Length = 307
Score = 111 bits (281), Expect = 6e-32
Identities = 35/70 (50%), Positives = 51/70 (72%), Gaps = 3/70 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVHCSAGVGR+GTFI LD +LQ++ + VDI IV+ +R++RV MVQ+ QY+ I
Sbjct: 238 IVVHCSAGVGRSGTFITLDRILQQI---NTSDYVDIFGIVYAMRKERVWMVQTEQQYICI 294
Query: 61 YECVQVYLQG 70
++C+ L+G
Sbjct: 295 HQCLLAVLEG 304
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine
phosphatase, human, structural GE structural genomics
consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo
sapiens} PDB: 1rpm_A 2c7s_A
Length = 286
Score = 111 bits (280), Expect = 7e-32
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVHCSAG GRTG FIA+DT+L E G VDI V LR QRV +VQ+ QYV++
Sbjct: 215 IVVHCSAGAGRTGCFIAIDTMLDMA---ENEGVVDIFNCVRELRAQRVNLVQTEEQYVFV 271
Query: 61 YECVQVYLQGG 71
++ + G
Sbjct: 272 HDAILEACLCG 282
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase,
substrate specificity, residue shift, signaling protein;
HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB:
1gwz_A
Length = 284
Score = 111 bits (279), Expect = 8e-32
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
++VH SAG+GRTGT I +D +++ + +DI + + +R QR MVQ+ AQY +I
Sbjct: 207 IIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFI 266
Query: 61 YECVQVYLQGG 71
Y + +++
Sbjct: 267 YVAIAQFIETT 277
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human
tyrosine phosphatase catalytic domain, LC-PTP,
hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A
2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A*
3d42_A* 2a3k_A
Length = 309
Score = 111 bits (280), Expect = 8e-32
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVHCSAG+GRTG FIA Q+L + G VDIL IV LR R M+Q+ QY ++
Sbjct: 236 IVVHCSAGIGRTGCFIATRIGCQQL---KARGEVDILGIVCQLRLDRGGMIQTAEQYQFL 292
Query: 61 YECVQVYLQ 69
+ + +Y
Sbjct: 293 HHTLALYAG 301
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine
phosphatase, glepp1, PTPU2, structural genom structural
genomics consortium, SGC; 2.15A {Homo sapiens} PDB:
2g59_A 2pi7_A
Length = 295
Score = 111 bits (279), Expect = 8e-32
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
M++HCSAGVGRTGTFIALD +LQ + VDIL +V +R R+ MVQ+ QY++I
Sbjct: 219 MIIHCSAGVGRTGTFIALDRLLQHI---RDHEFVDILGLVSEMRSYRMSMVQTEEQYIFI 275
Query: 61 YECVQVYLQGG 71
++CVQ+
Sbjct: 276 HQCVQLMWMKK 286
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine
phosphatase, WPD-loop, sulfamic acid, inhibitor, drug
design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A
2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A*
2i4h_A* 2i5x_A* 2ahs_A
Length = 291
Score = 111 bits (279), Expect = 1e-31
Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
VVHCSAGVGRTGTFIALD +LQ+L + SVDI VH LR RV MVQ+ QYVY+
Sbjct: 221 TVVHCSAGVGRTGTFIALDRILQQL---DSKDSVDIYGAVHDLRLHRVHMVQTECQYVYL 277
Query: 61 YECVQVYLQG 70
++CV+ L+
Sbjct: 278 HQCVRDVLRA 287
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal
transduction, glycoprotein, phosphorylation, signal;
2.25A {Mus musculus} SCOP: c.45.1.2
Length = 302
Score = 111 bits (279), Expect = 1e-31
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVHCSAGVGRTGTF+ +D +L + VD+ V +R QR MVQ+ QYV+I
Sbjct: 228 IVVHCSAGVGRTGTFVVIDAMLDMM---HSERKVDVYGFVSRIRAQRCQMVQTDMQYVFI 284
Query: 61 YECVQVYLQGG 71
Y+ + + G
Sbjct: 285 YQALLEHYLYG 295
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine
phosphatase, human, structural genomics, structural
genomics consortium, SGC; 1.50A {Homo sapiens}
Length = 303
Score = 111 bits (279), Expect = 1e-31
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+ VHCSAG GRTG +D V Q L + +V +R+QR VQ+ QY ++
Sbjct: 229 LCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQRPAAVQTEEQYRFL 288
Query: 61 YECVQVYLQ 69
Y V
Sbjct: 289 YHTVAQMFC 297
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor
phosphatase, human, structural GENO structural genomics
consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB:
3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A*
3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A*
3qcn_A
Length = 320
Score = 111 bits (279), Expect = 1e-31
Identities = 27/71 (38%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
++VHCSAGVGRTGT+I +D++LQ++ + +V++L + +R QR +VQ+ QY++I
Sbjct: 249 VLVHCSAGVGRTGTYIVIDSMLQQI---KDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFI 305
Query: 61 YECVQVYLQGG 71
++ + + G
Sbjct: 306 HDALLEAILGK 316
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11,
tyrosine phosphatase, structural genomics, STR genomics
consortium, SGC, deafness; 1.60A {Homo sapiens} PDB:
3jrl_A* 3mow_A* 3o5x_A*
Length = 316
Score = 111 bits (279), Expect = 2e-31
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVHCSAG+GRTGTFI +D ++ + +D+ + + +R QR MVQ+ AQY +I
Sbjct: 242 VVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFI 301
Query: 61 YECVQVYLQGGVRH 74
Y VQ Y++ R
Sbjct: 302 YMAVQHYIETLQRR 315
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14,
hydrolase; 1.65A {Homo sapiens}
Length = 325
Score = 111 bits (279), Expect = 2e-31
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVHCSAGVGRTG I + ++ L E V++ ++ LR QR+ M+Q++AQY ++
Sbjct: 255 IVVHCSAGVGRTGVLILSELMIYCL---EHNEKVEVPMMLRLLREQRMFMIQTIAQYKFV 311
Query: 61 YECVQVYLQ 69
Y+ + +LQ
Sbjct: 312 YQVLIQFLQ 320
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase,
phosphate ION, colorectal cancer alternative splicing,
coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP:
c.45.1.2
Length = 315
Score = 110 bits (278), Expect = 2e-31
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
++ HCSAG+GR+GT I +D VL + + DI +V +R QR MVQ+ QY++
Sbjct: 242 IITHCSAGIGRSGTLICIDVVLGLI---SQDLDFDISDLVRCMRLQRHGMVQTEDQYIFC 298
Query: 61 YECVQVYLQGGVRHERQ 77
Y+ + L E Q
Sbjct: 299 YQVILYVLTRLQAEEEQ 315
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase,
STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB:
2bij_A 2bv5_A*
Length = 305
Score = 110 bits (277), Expect = 2e-31
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
++VH SAG+GRTG FIA Q+L + G VDIL+ LR+ R M+Q+ QY ++
Sbjct: 234 IIVHSSAGIGRTGCFIATSICCQQL---RQEGVVDILKTTCQLRQDRGGMIQTCEQYQFV 290
Query: 61 YECVQVYLQ 69
+ + +Y +
Sbjct: 291 HHVMSLYEK 299
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein
tyrosine phosphatase precursor, phosph structural
genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Length = 301
Score = 110 bits (277), Expect = 3e-31
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
++VHCS G GRTGT+I +D VL R+ ++ +DI + +R QR +V+S Q+ +
Sbjct: 227 IIVHCSDGAGRTGTYILIDMVLNRM--AKGVKEIDIAATLEHVRDQRPGLVRSKDQFEFA 284
Query: 61 YECVQVYLQGGVR 73
V + ++
Sbjct: 285 LTAVAEEVNAILK 297
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU
genomics, structural genomics consortium, SGC,
hydrolase; 1.54A {Homo sapiens}
Length = 287
Score = 109 bits (275), Expect = 4e-31
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
++VHCSAG+GRTG + ++T + ER + L IV +R QR +MVQ+ +QY ++
Sbjct: 212 VLVHCSAGIGRTGVLVTMETAMCLT---ERNLPIYPLDIVRKMRDQRAMMVQTSSQYKFV 268
Query: 61 YECVQVYLQGG 71
E + + G
Sbjct: 269 CEAILRVYEEG 279
>2pa5_A Tyrosine-protein phosphatase non-receptor type 9; protein tyrosine
phosphatase, MEG2, PTPN9, structural genomi structural
genomics consortium, SGC; 1.60A {Homo sapiens}
Length = 314
Score = 110 bits (276), Expect = 4e-31
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVHCSAG+GRTGTF +LD L +L E G++++ + V +R QR +Q+ QY +
Sbjct: 236 IVVHCSAGIGRTGTFCSLDICLAQL---EELGTLNVFQTVSRMRTQRAFSIQTPEQYYFC 292
Query: 61 YECVQVYLQGGVRHERQIQNNE 82
Y+ + + + E + +
Sbjct: 293 YKAILEFAE----KEGMVSAHH 310
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP,
tyrosine phosphatase, MEG-1, structural genomics
structural genomics consortium, SGC; 2.45A {Homo
sapiens}
Length = 320
Score = 109 bits (275), Expect = 5e-31
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVHCSAG+GRTG I ++T + + E V L IV +R QR +M+Q+ +QY ++
Sbjct: 240 VVVHCSAGIGRTGVLITMETAMCLI---ECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFV 296
Query: 61 YECV-QVYLQGGVRHERQIQNN 81
E + +VY +G V+ N
Sbjct: 297 CEAILKVYEEGFVKPLTTSTNK 318
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 111 bits (280), Expect = 1e-30
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVHCSAG+GRTGTFI +D ++ + +D+ + + +R QR MVQ+ AQY I
Sbjct: 455 VVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRSI 514
Query: 61 YECVQVYLQ 69
Y VQ Y++
Sbjct: 515 YMAVQHYIE 523
Score = 48.7 bits (116), Expect = 2e-08
Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Query: 1 MVVHCSAG---VGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQR 47
+++ C VG F +L +++ ++ V+ L V L++
Sbjct: 170 VMIRCQELKYDVGGGERFDSLTDLVEHY---KKNPMVETLGTVLQLKQPL 216
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 111 bits (279), Expect = 1e-30
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
++VHCSAG+GRTGT I +D +++ + +DI + + +R QR MVQ+ AQY +I
Sbjct: 449 IIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFI 508
Query: 61 YECVQVYLQGGVRHERQIQNNEA 83
Y + +++ + +Q+ +
Sbjct: 509 YVAIAQFIETTKKKLEVLQSQKG 531
Score = 57.2 bits (138), Expect = 2e-11
Identities = 11/89 (12%), Positives = 28/89 (31%), Gaps = 1/89 (1%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+ V C G G D++ + + ++ G + LR+ + A
Sbjct: 167 IKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENR 226
Query: 61 YECVQVYLQGGVRHERQIQNN-EAIERDE 88
+ + + E++++ E
Sbjct: 227 VLELNKKQESEDTAKAGFWEEFESLQKQE 255
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism,
phosphorylation, endoplasmic reticulum, oxidation,
hydrolase, acetylation; 1.5A {Homo sapiens} SCOP:
c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A
2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A*
2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A*
2zn7_A* ...
Length = 304
Score = 108 bits (271), Expect = 2e-30
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVHCSAG+GR+GTF DT L + + SVDI +++ +R+ R+ ++Q+ Q +
Sbjct: 217 VVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGLIQTADQLRFS 276
Query: 61 YECVQVYLQ 69
Y V +
Sbjct: 277 YLAVIEGAK 285
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo
sapiens} SCOP: c.45.1.2
Length = 314
Score = 108 bits (271), Expect = 2e-30
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
V+HCSAG+GR+GTF +DT L + E+ ++I +++ +R+ R+ ++Q+ Q +
Sbjct: 212 AVIHCSAGIGRSGTFSLVDTCLVLM---EKGDDINIKQVLLNMRKYRMGLIQTPDQLRFS 268
Query: 61 YECVQVYLQ 69
Y + +
Sbjct: 269 YMAIIEGAK 277
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 110 bits (276), Expect = 5e-30
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVH SAGVGRTGT+I +D +L+ L E VD+ V LRRQR LMVQ AQY+ I
Sbjct: 226 IVVHSSAGVGRTGTYIGIDAMLEGL---EAENKVDVYGYVVKLRRQRCLMVQVEAQYILI 282
Query: 61 YECVQVYLQ 69
++ + Y Q
Sbjct: 283 HQALVEYNQ 291
Score = 107 bits (269), Expect = 4e-29
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+++HC G +TG F AL +L+ E VDI ++V LR+ R+ MV + QY ++
Sbjct: 542 LLIHCRDGSQQTGIFCALLNLLESA---ETEEVVDIFQVVKALRKARLGMVSTFEQYQFL 598
Query: 61 YECVQVYLQGG 71
Y+ +
Sbjct: 599 YDVIASTYPAQ 609
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 107 bits (268), Expect = 5e-30
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
++VHCSAG+GRTGT I L + + IV ++++R MVQ L QY I
Sbjct: 225 ILVHCSAGIGRTGTLIGAYAALLHIER-GILTDSTVYSIVAAMKQKRFGMVQRLEQYAVI 283
Query: 61 YECVQVYLQGGVR 73
Y V L +
Sbjct: 284 YMTVLGRLGVDIS 296
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 109 bits (273), Expect = 1e-29
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VH G G AL T+ Q+L E +VD+ ++ + R + + QY +I
Sbjct: 522 TIVHDEYGAVSAGMLCALTTLSQQL---ENENAVDVFQVAKMINLMRPGVFTDIEQYQFI 578
Query: 61 YECVQVYLQGG--VRHERQIQNNEAIERDEGVD 91
Y+ + + + N A+ + D
Sbjct: 579 YKAMLSLVSTKENGNGPMTVDKNGAVLIADESD 611
Score = 108 bits (272), Expect = 2e-29
Identities = 26/64 (40%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
++VHCSAGVGRTGT+I +D++LQ++ + +V++L + +R QR +VQ+ QY++I
Sbjct: 231 VLVHCSAGVGRTGTYIVIDSMLQQI---KDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFI 287
Query: 61 YECV 64
++ +
Sbjct: 288 HDAL 291
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 108 bits (272), Expect = 2e-29
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
MVVHCSAGVGRTG FI +D +L+R+ + +VDI V +R QR MVQ+ QYV+I
Sbjct: 212 MVVHCSAGVGRTGCFIVIDAMLERM---KHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFI 268
Query: 61 YECV 64
+E +
Sbjct: 269 HEAL 272
Score = 107 bits (270), Expect = 3e-29
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+ VHCSAGVGRTG FI L VL+R+ G VD+ + V LR QR MVQ+ QY
Sbjct: 503 ITVHCSAGVGRTGVFITLSIVLERM---RYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLC 559
Query: 61 YECVQVYLQGG 71
Y YL
Sbjct: 560 YRAALEYLGSF 570
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 108 bits (271), Expect = 2e-29
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+ VHCSAG GRTGTFIAL +L+R+ + G +D+ + V LR QR MVQ+L QY +
Sbjct: 521 ITVHCSAGAGRTGTFIALSNILERV---KAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFC 577
Query: 61 YECVQVYLQ 69
Y+ VQ ++
Sbjct: 578 YKVVQDFID 586
Score = 107 bits (268), Expect = 6e-29
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VVHCSAGVGRTGTFI +D ++ + VD+ V +R QR MVQ+ QY +I
Sbjct: 226 IVVHCSAGVGRTGTFIVIDAMMAMM---HAEQKVDVFEFVSRIRNQRPQMVQTDMQYTFI 282
Query: 61 YECVQVYLQGGVRHERQIQNNE 82
Y+ + Y G +
Sbjct: 283 YQALLEYYLYGDTELDVSSLEK 304
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A
{Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A*
1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A*
1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A*
1pa9_A* 1yts_A
Length = 306
Score = 97.1 bits (242), Expect = 3e-26
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRV-LMVQSLAQYVY 59
V+H AGVGRT I + + + + +V +R QR +MVQ Q
Sbjct: 237 PVIHSRAGVGRTAQLIGAMCMNDSRN-----SQLSVEDMVSQMRVQRNGIMVQKDEQLDV 291
Query: 60 IYECVQVYLQ 69
+ + + +
Sbjct: 292 LIKLAEGQGR 301
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase
activating protein, 4-helix bundle, disorder, signaling
protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1
c.45.1.2 PDB: 1g4u_S
Length = 383
Score = 97.3 bits (242), Expect = 7e-26
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 8/72 (11%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRV-LMVQSLAQYVY 59
++HC GVGRTGT A + ++ ++ R R M++ +Q+V
Sbjct: 317 PMIHCLGGVGRTGTMAAALVLKDN-------PHSNLEQVRADFRDSRNNRMLEDASQFVQ 369
Query: 60 IYECVQVYLQGG 71
+ L
Sbjct: 370 LKAMQAQLLMTT 381
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 58.3 bits (141), Expect = 2e-12
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+VHC G+GRTGT +A +L E A + +R R VQ+ Q +++
Sbjct: 92 NLVHCVGGIGRTGTILASYLILTEGLEVESA--------IDEVRLVRPGAVQTYEQEMFL 143
Query: 61 YECVQVY 67
+
Sbjct: 144 LRVEGMR 150
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 40.6 bits (94), Expect = 2e-05
Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 17/75 (22%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLH-----------------NSERAGSVDILRIVHGL 43
+ HC AG GRT ++A+ +++ + +
Sbjct: 533 LHFHCQAGAGRTTAYMAMYDMMKNPDVSLGDILSRQYLLGGNYVAYEIAKPKPDQWKADY 592
Query: 44 RRQRVLMVQSLAQYV 58
Q+ M++ QYV
Sbjct: 593 YHQKAHMIEKFYQYV 607
Score = 40.6 bits (94), Expect = 2e-05
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDI 36
+ HC AG+GRT F+ + +L+ + +
Sbjct: 235 LHYHCYAGMGRTTIFMVMHDILKNAKDVSFDDIIQR 270
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 37.8 bits (88), Expect = 9e-05
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 2 VVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYIY 61
VHC+ G GRTGT +A V +R + A + +RR R +++ Q ++
Sbjct: 93 GVHCALGFGRTGTMLACYLVKERGLAAGDA--------IAEIRRLRPGSIETYEQEKAVF 144
Query: 62 E 62
+
Sbjct: 145 Q 145
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 38.2 bits (88), Expect = 9e-05
Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 18/76 (23%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNS--------ERAGSVDILRIVHG---------- 42
+ H AGVGRT F+ + +L+ S G
Sbjct: 216 LHFHSEAGVGRTTAFMVMTDMLKNPSVSLKDILYRQHEIGGFYYGEFPIKTKDKDSWKTK 275
Query: 43 LRRQRVLMVQSLAQYV 58
R++++M++ +YV
Sbjct: 276 YYREKIVMIEQFYRYV 291
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 36.2 bits (83), Expect = 4e-04
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
++H G+GR+ A +L L ++ + + LR +Q++ QY Y+
Sbjct: 136 TLIHSYGGLGRSCLVAAC--LLLYLSDTISP--EQAIDSLRDLRGSG--AIQTIKQYNYL 189
Query: 61 YE 62
+E
Sbjct: 190 HE 191
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 35.4 bits (81), Expect = 0.001
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+ VH AG+GRTGT IA + + + +R R V Q +
Sbjct: 272 IAVHSKAGLGRTGTLIACYIMKHYRMTAAET--------IAWVRICRPGSVIGPQQQFLV 323
Query: 61 YECVQVYLQG 70
+ ++L+G
Sbjct: 324 MKQTNLWLEG 333
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 34.3 bits (78), Expect = 0.002
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 1 MVVHCSAGVGRTGTFIA 17
+ VHC+ G RTG I
Sbjct: 144 IGVHCTHGFNRTGFLIC 160
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine
phosphatase, P-loop, hydrolase; HET: PO4; 1.50A
{Autographa californicanucleopolyhedrovirus}
Length = 169
Score = 33.4 bits (76), Expect = 0.004
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 1 MVVHCSAGVGRTGTFIA 17
+ VHC+ G+ RTG +
Sbjct: 116 VGVHCTHGINRTGYMVC 132
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 33.0 bits (75), Expect = 0.006
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 2 VVHCSAGVGRTGTFIAL 18
VHC AG+GR +AL
Sbjct: 113 GVHCVAGLGRAPILVAL 129
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol,
hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1
c.45.1.1
Length = 324
Score = 32.2 bits (72), Expect = 0.014
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
+HC AG GRTG I + + + L +R + V +Q Y+
Sbjct: 114 AAIHCKAGKGRTGVMICAYLLHRGKFLKAQEA----LDFYGEVRTRDKKGVTIPSQRRYV 169
Query: 61 YECVQVYLQGGVRHERQ 77
Y L+ + +
Sbjct: 170 YY-YSYLLKNHLDYRPV 185
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 30.8 bits (70), Expect = 0.029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 3 VHCSAGVGRTGTFIA 17
VHC AG R+ T +A
Sbjct: 94 VHCKAGRSRSATMVA 108
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine
phosphatase IVA1...; structural genomics, NYSGXRC,
unknown function, PSI; 1.90A {Homo sapiens} SCOP:
c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Length = 159
Score = 30.4 bits (68), Expect = 0.043
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILR 38
+ VHC AG+GR +AL + + + + R
Sbjct: 99 IAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKR 136
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2
domain, hydrolase; 2.20A {Bos taurus}
Length = 361
Score = 30.7 bits (68), Expect = 0.051
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYI 60
VVHC G + + + L+++ +R++ +R + S + Y+
Sbjct: 118 CVVHCLDGRAASSILVGAMFIFCNLYSTPG----PAVRLL---YAKRPGIGLSPSHRRYL 170
Query: 61 YECVQVYLQGGVRH 74
+ R
Sbjct: 171 GYMCDLLADKPYRP 184
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual
specific phosphatase, COMP with peptide, hydrolase;
2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Length = 189
Score = 30.1 bits (67), Expect = 0.077
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 1 MVVHCSAGVGRTGTFIAL 18
+ VHC AG+GR +AL
Sbjct: 120 IAVHCVAGLGRAPVLVAL 137
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4;
1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A*
3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Length = 339
Score = 30.0 bits (66), Expect = 0.089
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 1 MVVHCSAGVGRTGTFIA 17
+ +H G GRTGT ++
Sbjct: 122 IAIHSKGGKGRTGTLVS 138
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 28.9 bits (64), Expect = 0.21
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 8/47 (17%)
Query: 2 VVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRV 48
V + G ALDTV L N + +DI+ + L + V
Sbjct: 1853 YV-AA------GDLRALDTVTNVL-NFIKLQKIDIIELQKSLSLEEV 1891
Score = 24.6 bits (53), Expect = 7.4
Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 8/48 (16%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRV 48
+VV +G +L + L ++ +D RI R+ +
Sbjct: 377 LVV--------SGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKF 416
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG
for eukaryotic structural genomics, phosphoprote
phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1
PDB: 2q47_A
Length = 151
Score = 28.5 bits (63), Expect = 0.22
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSE 29
+++HC G RTG + LQ+ +
Sbjct: 95 VLIHCKRGKHRTGCLVGCLRKLQKWCLTS 123
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 27.9 bits (61), Expect = 0.42
Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 18/68 (26%)
Query: 9 VGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMV----QSLAQYVYIYECV 64
V R ++ L L L A +V ++ G ++ +A V + V
Sbjct: 131 VSRLQPYLKLRQALLEL---RPAKNV----LIDG-------VLGSGKTWVALDVCLSYKV 176
Query: 65 QVYLQGGV 72
Q + +
Sbjct: 177 QCKMDFKI 184
Score = 26.4 bits (57), Expect = 1.9
Identities = 8/67 (11%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 21 VLQRL-HNSERAGSVDILRIVHGLRRQRVLMVQSLAQYVYIYECVQVYLQGGVRHERQIQ 79
+L + + D++ +V+ L + ++ Q + I + + L+ + +E +
Sbjct: 391 LLSLIWFDVI---KSDVMVVVNKLHKYSLVEKQPKESTISIPS-IYLELKVKLENEYAL- 445
Query: 80 NNEAIER 86
+ ++
Sbjct: 446 HRSIVDH 452
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 26.7 bits (58), Expect = 1.2
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 3 VHCSAGVGRTGTFI 16
VH +AG+GR
Sbjct: 111 VHSTAGMGRAPAVA 124
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel
beta sheet with flanking helices, structural genomics,
PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5
PDB: 2oz5_A*
Length = 296
Score = 26.1 bits (56), Expect = 1.7
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 1 MVVHCSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSLAQ 56
++ HC AG RTG +AL VL+ + D LR + + R + + + Q
Sbjct: 176 VLTHCFAGKDRTGFVVAL--VLEAVGLDRDVIVADYLRSNDSVPQLRARISEMIQQ 229
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 25.3 bits (56), Expect = 2.9
Identities = 4/32 (12%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 16 IALDTVLQRLHNSERAGSVDILR--IVHGLRR 45
+ + V + + + + + LR ++G++
Sbjct: 389 LIFNAVADHMPDLKPISAPERLRSGWLNGIKH 420
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 25.4 bits (56), Expect = 3.3
Identities = 5/32 (15%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 16 IALDTVLQRLHNSERAGSVDILR--IVHGLRR 45
+A D + +++ + L +HG++
Sbjct: 398 VAFDELRRQMPDVVATEEPARLLSQFIHGIKT 429
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 25.4 bits (56), Expect = 3.3
Identities = 7/32 (21%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 16 IALDTVLQRLHNSERAGSVDILR--IVHGLRR 45
I + +L +L + E +G ++ V G +
Sbjct: 389 IFFEELLPKLKSVELSGPPRLVATNFVGGPKN 420
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 25.0 bits (55), Expect = 3.8
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 16 IALDTVLQRLHNSERAGSVDILR--IVHGLRR 45
+ LD +L R+ + E AG + V G +
Sbjct: 411 VLLDVLLDRVDSLELAGEPKRVNSTFVGGFKS 442
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 24.9 bits (55), Expect = 4.0
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Query: 16 IALDTVLQRLHNSERAGSVDILR----IVHGLRRQRV 48
+AL+ ++ R + LR IV G R V
Sbjct: 365 VALEEIIARFGRLTVDRDDERLRHFEQIVLGTRHLPV 401
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 25.0 bits (55), Expect = 4.4
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 16 IALDTVLQRLHNSERAGSVDILR--IVHGLRRQRV 48
+ L + +R+ + LR +V G R V
Sbjct: 376 VVLRVLAERVSRVDLEREPAWLRAIVVQGYRELPV 410
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 24.5 bits (54), Expect = 5.6
Identities = 7/32 (21%), Positives = 12/32 (37%), Gaps = 2/32 (6%)
Query: 16 IALDTVLQRLHNSERAGSVDILR--IVHGLRR 45
I + +L R E + +R V G +
Sbjct: 388 ILWEEILTRFSRIEVMAEPERVRSNFVRGYAK 419
>1ytm_A Phosphoenolpyruvate carboxykinase [ATP], phosphoenolpyruvate;
domain closure, nucleotide binding; HET: ATP; 2.20A
{Anaerobiospirillum succiniciproducens} PDB: 1yvy_A
Length = 532
Score = 24.7 bits (54), Expect = 5.8
Identities = 6/18 (33%), Positives = 8/18 (44%)
Query: 1 MVVHCSAGVGRTGTFIAL 18
+HCSA G A+
Sbjct: 222 AAMHCSANTDLEGKNTAI 239
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus
norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A
1aux_A*
Length = 309
Score = 24.7 bits (53), Expect = 6.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 19 DTVLQRLHNSERAGSVDILRIVHGLRRQRVLMVQSL 54
D VL R H A + D +V G++ + + SL
Sbjct: 70 DFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSINSL 105
>3cm3_A Late protein H1, dual specificity protein phosphatase;
dual-specificity phosphatase, VH1, hydrolase; 1.32A
{Vaccinia virus} PDB: 2rf6_A 2p4d_A
Length = 176
Score = 24.3 bits (53), Expect = 6.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 3 VHCSAGVGRTGTFI 16
VH +AGV R+G I
Sbjct: 113 VHSAAGVNRSGAMI 126
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 24.5 bits (53), Expect = 7.3
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 13/39 (33%)
Query: 13 GTF----------IALDTVLQRLHNSERAGSVDILRIVH 41
GTF ++L+T+ R H SE + L +
Sbjct: 632 GTFGGDGMYSESKLSLETLFNRWH-SESWA--NQLTVCG 667
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT,
endosomal, trafficking, protein complex, transport
protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54
a.4.5.54 PDB: 1w7p_A
Length = 233
Score = 24.1 bits (52), Expect = 8.8
Identities = 6/40 (15%), Positives = 13/40 (32%)
Query: 5 CSAGVGRTGTFIALDTVLQRLHNSERAGSVDILRIVHGLR 44
C G I+ + + G D+ + + L+
Sbjct: 103 CRQTKDMNGGVISFQELEKVHFRKLNVGLDDLEKSIDMLK 142
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase,
hypothetical protein; 2.7A {Saccharomyces cerevisiae}
PDB: 2j17_A* 2j16_B
Length = 182
Score = 24.0 bits (52), Expect = 8.9
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 3 VHCSAGVGRTGTFI 16
+H G+ R+ T I
Sbjct: 122 IHAQCGLSRSATLI 135
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis
inhibition, bromopyruvate, amino-acid biosynthesis; HET:
FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A
3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Length = 644
Score = 24.0 bits (52), Expect = 9.2
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 27 NSERAGSVDILRIVHGLRRQRV 48
N ER G+V ++ + L + V
Sbjct: 315 NGERTGNVCLVTLGLNLFSRGV 336
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.325 0.140 0.400
Gapped
Lambda K H
0.267 0.0418 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,449,950
Number of extensions: 74775
Number of successful extensions: 329
Number of sequences better than 10.0: 1
Number of HSP's gapped: 295
Number of HSP's successfully gapped: 107
Length of query: 93
Length of database: 6,701,793
Length adjustment: 60
Effective length of query: 33
Effective length of database: 5,026,533
Effective search space: 165875589
Effective search space used: 165875589
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.2 bits)