BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15339
(795 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8WXI7|MUC16_HUMAN Mucin-16 OS=Homo sapiens GN=MUC16 PE=1 SV=2
Length = 22152
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 147/609 (24%), Positives = 255/609 (41%), Gaps = 14/609 (2%)
Query: 122 SLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQT 181
S+ TS + +S P+ + ++P T L TS + ++ P + L P S+ T
Sbjct: 10854 SMTTSHGAESSSAVPTPTVSTEVPGVVTPLVTSSRAVISTTIPILTLSPGEPETTPSMAT 10913
Query: 182 SPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLS 241
S +S P+ + +P TSL TS + ++ P + P S+ TS +
Sbjct: 10914 SHGEEASSAIPTPTVSPGVPGVVTSLVTSSRAVTSTTIPILTFSLGEPETTPSMATSHGT 10973
Query: 242 NFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTS 301
S P++ ++P TSL S + ++ P++ L P S+ TS + +S
Sbjct: 10974 EAGSAVPTVLP--EVPGMVTSLVASSRAVTSTTLPTLTLSPGEPETTPSMATSHGAEASS 11031
Query: 302 NFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPS 361
P++ ++P TSL TS +++ P++ L S+ TS + +S P+
Sbjct: 11032 TVPTVSP--EVPGVVTSLVTSSSGVNSTSIPTLILSPGELETTPSMATSHGAEASSAVPT 11089
Query: 362 IKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLH 421
+ + T L TS + ++ P + L P S+ TS +S + +
Sbjct: 11090 PTVSPGVSGVVTPLVTSSRAVTSTTIPILTLSSSEPETTPSMATSHGVEASSAV--LTVS 11147
Query: 422 FKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLP 481
++P TSL TS + ++ P++ + P TSL T + S P++ + +
Sbjct: 11148 PEVPGMVTSLVTSSRAVTSTTIPTLTISSDEPETTTSLVTHSEAKMISAIPTLAVSPTVQ 11207
Query: 482 LYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQT 541
TSL TS S TS F ++ + P S P + +S P++ + P
Sbjct: 11208 GLVTSLVTSSGSE-TSAFSNLTVASSQPETIDSWVAHPGTEASSVVPTLTVSTGEPFTNI 11266
Query: 542 SLQTSPLSNFTSNFPSIKLHFKLPLYQT--SLQTSPLSNFTSNFPSIKLHFKLPLYQTSL 599
SL T P + +S P F T S TSP + +S S + +P TSL
Sbjct: 11267 SLVTHP-AESSSTLPRTTSRFSHSELDTMPSTVTSPEAESSSAI-STTISPGIPGVLTSL 11324
Query: 600 QTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFK--LPLYQTSLQT 657
TS + ++ FP++ S T P T+ P ++ P S+ T
Sbjct: 11325 VTSSGRDISATFPTVPESPHESEATASWVTHPAVTSTT-VPRTTPNYSHSEPDTTPSIAT 11383
Query: 658 SPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLS 717
SP + TS+FP+I + +P TS TS ++ + P++ L P TS T +
Sbjct: 11384 SPGAEATSDFPTITVSPDVPDMVTSQVTSSGTDTSITIPTLTLSSGEPETTTSFITYSET 11443
Query: 718 NFTSNFPSI 726
+ +S P++
Sbjct: 11444 HTSSAIPTL 11452
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 147/609 (24%), Positives = 255/609 (41%), Gaps = 14/609 (2%)
Query: 150 SLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQT 209
S+ TS + +S P+ + ++P T L TS + ++ P + L P S+ T
Sbjct: 10854 SMTTSHGAESSSAVPTPTVSTEVPGVVTPLVTSSRAVISTTIPILTLSPGEPETTPSMAT 10913
Query: 210 SPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLS 269
S +S P+ + +P TSL TS + ++ P + P S+ TS +
Sbjct: 10914 SHGEEASSAIPTPTVSPGVPGVVTSLVTSSRAVTSTTIPILTFSLGEPETTPSMATSHGT 10973
Query: 270 NFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTS 329
S P++ ++P TSL S + ++ P++ L P S+ TS + +S
Sbjct: 10974 EAGSAVPTVLP--EVPGMVTSLVASSRAVTSTTLPTLTLSPGEPETTPSMATSHGAEASS 11031
Query: 330 NFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPS 389
P++ ++P TSL TS +++ P++ L S+ TS + +S P+
Sbjct: 11032 TVPTVSP--EVPGVVTSLVTSSSGVNSTSIPTLILSPGELETTPSMATSHGAEASSAVPT 11089
Query: 390 IKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLH 449
+ + T L TS + ++ P + L P S+ TS +S + +
Sbjct: 11090 PTVSPGVSGVVTPLVTSSRAVTSTTIPILTLSSSEPETTPSMATSHGVEASSAV--LTVS 11147
Query: 450 FKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLP 509
++P TSL TS + ++ P++ + P TSL T + S P++ + +
Sbjct: 11148 PEVPGMVTSLVTSSRAVTSTTIPTLTISSDEPETTTSLVTHSEAKMISAIPTLAVSPTVQ 11207
Query: 510 LYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQT 569
TSL TS S TS F ++ + P S P + +S P++ + P
Sbjct: 11208 GLVTSLVTSSGSE-TSAFSNLTVASSQPETIDSWVAHPGTEASSVVPTLTVSTGEPFTNI 11266
Query: 570 SLQTSPLSNFTSNFPSIKLHFKLPLYQT--SLQTSPLSNFTSNFPSIKLHFKLPLYQTSL 627
SL T P + +S P F T S TSP + +S S + +P TSL
Sbjct: 11267 SLVTHP-AESSSTLPRTTSRFSHSELDTMPSTVTSPEAESSSAI-STTISPGIPGVLTSL 11324
Query: 628 QTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFK--LPLYQTSLQT 685
TS + ++ FP++ S T P T+ P ++ P S+ T
Sbjct: 11325 VTSSGRDISATFPTVPESPHESEATASWVTHPAVTSTT-VPRTTPNYSHSEPDTTPSIAT 11383
Query: 686 SPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLS 745
SP + TS+FP+I + +P TS TS ++ + P++ L P TS T +
Sbjct: 11384 SPGAEATSDFPTITVSPDVPDMVTSQVTSSGTDTSITIPTLTLSSGEPETTTSFITYSET 11443
Query: 746 NFTSNFPSI 754
+ +S P++
Sbjct: 11444 HTSSAIPTL 11452
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 144/593 (24%), Positives = 247/593 (41%), Gaps = 14/593 (2%)
Query: 206 SLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQT 265
S+ TS + +S P+ + ++P T L TS + ++ P + L P S+ T
Sbjct: 10854 SMTTSHGAESSSAVPTPTVSTEVPGVVTPLVTSSRAVISTTIPILTLSPGEPETTPSMAT 10913
Query: 266 SPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLS 325
S +S P+ + +P TSL TS + ++ P + P S+ TS +
Sbjct: 10914 SHGEEASSAIPTPTVSPGVPGVVTSLVTSSRAVTSTTIPILTFSLGEPETTPSMATSHGT 10973
Query: 326 NFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTS 385
S P++ ++P TSL S + ++ P++ L P S+ TS + +S
Sbjct: 10974 EAGSAVPTVLP--EVPGMVTSLVASSRAVTSTTLPTLTLSPGEPETTPSMATSHGAEASS 11031
Query: 386 NFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPS 445
P++ ++P TSL TS +++ P++ L S+ TS + +S P+
Sbjct: 11032 TVPTVSP--EVPGVVTSLVTSSSGVNSTSIPTLILSPGELETTPSMATSHGAEASSAVPT 11089
Query: 446 IKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLH 505
+ + T L TS + ++ P + L P S+ TS +S + +
Sbjct: 11090 PTVSPGVSGVVTPLVTSSRAVTSTTIPILTLSSSEPETTPSMATSHGVEASSAV--LTVS 11147
Query: 506 FKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLP 565
++P TSL TS + ++ P++ + P TSL T + S P++ + +
Sbjct: 11148 PEVPGMVTSLVTSSRAVTSTTIPTLTISSDEPETTTSLVTHSEAKMISAIPTLAVSPTVQ 11207
Query: 566 LYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQT 625
TSL TS S TS F ++ + P S P + +S P++ + P
Sbjct: 11208 GLVTSLVTSSGSE-TSAFSNLTVASSQPETIDSWVAHPGTEASSVVPTLTVSTGEPFTNI 11266
Query: 626 SLQTSPLSNFTSNFPSIKLHFKLPLYQT--SLQTSPLSNFTSNFPSIKLHFKLPLYQTSL 683
SL T P + +S P F T S TSP + +S S + +P TSL
Sbjct: 11267 SLVTHP-AESSSTLPRTTSRFSHSELDTMPSTVTSPEAESSSAI-STTISPGIPGVLTSL 11324
Query: 684 QTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFK--LPLYQTSLQT 741
TS + ++ FP++ S T P T+ P ++ P S+ T
Sbjct: 11325 VTSSGRDISATFPTVPESPHESEATASWVTHPAVTSTT-VPRTTPNYSHSEPDTTPSIAT 11383
Query: 742 SPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTS 794
SP + TS+FP+I + +P TS TS ++ + P++ L P TS
Sbjct: 11384 SPGAEATSDFPTITVSPDVPDMVTSQVTSSGTDTSITIPTLTLSSGEPETTTS 11436
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 143/596 (23%), Positives = 248/596 (41%), Gaps = 14/596 (2%)
Query: 107 FPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSI 166
P+ + ++P T L TS + ++ P + L P S+ TS +S P+
Sbjct: 10867 VPTPTVSTEVPGVVTPLVTSSRAVISTTIPILTLSPGEPETTPSMATSHGEEASSAIPTP 10926
Query: 167 KLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHF 226
+ +P TSL TS + ++ P + P S+ TS + S P++
Sbjct: 10927 TVSPGVPGVVTSLVTSSRAVTSTTIPILTFSLGEPETTPSMATSHGTEAGSAVPTVLP-- 10984
Query: 227 KLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPL 286
++P TSL S + ++ P++ L P S+ TS + +S P++ ++P
Sbjct: 10985 EVPGMVTSLVASSRAVTSTTLPTLTLSPGEPETTPSMATSHGAEASSTVPTVSP--EVPG 11042
Query: 287 YQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTS 346
TSL TS +++ P++ L S+ TS + +S P+ + + T
Sbjct: 11043 VVTSLVTSSSGVNSTSIPTLILSPGELETTPSMATSHGAEASSAVPTPTVSPGVSGVVTP 11102
Query: 347 LQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTS 406
L TS + ++ P + L P S+ TS +S + + ++P TSL TS
Sbjct: 11103 LVTSSRAVTSTTIPILTLSSSEPETTPSMATSHGVEASSAV--LTVSPEVPGMVTSLVTS 11160
Query: 407 PLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSN 466
+ ++ P++ + P TSL T + S P++ + + TSL TS S
Sbjct: 11161 SRAVTSTTIPTLTISSDEPETTTSLVTHSEAKMISAIPTLAVSPTVQGLVTSLVTSSGSE 11220
Query: 467 FTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSN 526
TS F ++ + P S P + +S P++ + P SL T P + +S
Sbjct: 11221 -TSAFSNLTVASSQPETIDSWVAHPGTEASSVVPTLTVSTGEPFTNISLVTHP-AESSST 11278
Query: 527 FPSIKLHFKLPLYQT--SLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFP 584
P F T S TSP + +S S + +P TSL TS + ++ FP
Sbjct: 11279 LPRTTSRFSHSELDTMPSTVTSPEAESSSAI-STTISPGIPGVLTSLVTSSGRDISATFP 11337
Query: 585 SIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFK--LPLYQTSLQTSPLSNFTSNFPSI 642
++ S T P T+ P ++ P S+ TSP + TS+FP+I
Sbjct: 11338 TVPESPHESEATASWVTHPAVTSTT-VPRTTPNYSHSEPDTTPSIATSPGAEATSDFPTI 11396
Query: 643 KLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSI 698
+ +P TS TS ++ + P++ L P TS T ++ +S P++
Sbjct: 11397 TVSPDVPDMVTSQVTSSGTDTSITIPTLTLSSGEPETTTSFITYSETHTSSAIPTL 11452
>sp|O15069|NACAD_HUMAN NAC-alpha domain-containing protein 1 OS=Homo sapiens GN=NACAD PE=1
SV=3
Length = 1562
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 139/433 (32%), Gaps = 112/433 (25%)
Query: 116 LPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLY 175
LPL T L ++P + S + L L Q S+ T P LPL
Sbjct: 606 LPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPP----------------LPLQ 649
Query: 176 QTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSL 235
T L ++P + S + L L Q S T P LPL T L
Sbjct: 650 DTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPP----------------LPLQDTDL 693
Query: 236 QTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSP 295
++P + S + L L Q S T P LPL T L ++P
Sbjct: 694 SSAPKPVAAATLVSQQAEEGLTLPQDSAMTPP----------------LPLQDTDLSSAP 737
Query: 296 LSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNF 355
+ S + L L Q S T P LPL T L ++P
Sbjct: 738 KPVAAATLVSQQAEEGLTLPQDSAMTPP----------------LPLQDTDLSSAPKPVA 781
Query: 356 TSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNF 415
+ S + L L Q S T P LPL T L ++P +
Sbjct: 782 AATIVSQQAEEGLTLPQDSAMTPP----------------LPLQDTDLSSAPKPVAAATI 825
Query: 416 PSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIK 475
S + L L Q S T P LPL T L ++P + S +
Sbjct: 826 VSQQAEEGLTLPQDSAMTPP----------------LPLQDTDLSSAPKPVAAATPVSQQ 869
Query: 476 LHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFK 535
L L Q S T P LPL T L ++P + S +
Sbjct: 870 AEEGLTLPQDSAMTPP----------------LPLQDTDLSSAPKPVAAATPVSQQAEEG 913
Query: 536 LPLYQTSLQTSPL 548
L L Q S T+PL
Sbjct: 914 LTLPQDSAMTAPL 926
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 139/433 (32%), Gaps = 112/433 (25%)
Query: 312 LPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLY 371
LPL T L ++P + S + L L Q S+ T PL PL
Sbjct: 606 LPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPL----------------PLQ 649
Query: 372 QTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSL 431
T L ++P + S + L L Q S T PL PL T L
Sbjct: 650 DTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPL----------------PLQDTDL 693
Query: 432 QTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSP 491
++P + S + L L Q S T PL PL T L ++P
Sbjct: 694 SSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPL----------------PLQDTDLSSAP 737
Query: 492 LSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNF 551
+ S + L L Q S T PL PL T L ++P
Sbjct: 738 KPVAAATLVSQQAEEGLTLPQDSAMTPPL----------------PLQDTDLSSAPKPVA 781
Query: 552 TSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNF 611
+ S + L L Q S T P LPL T L ++P +
Sbjct: 782 AATIVSQQAEEGLTLPQDSAMTPP----------------LPLQDTDLSSAPKPVAAATI 825
Query: 612 PSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIK 671
S + L L Q S T P LPL T L ++P + S +
Sbjct: 826 VSQQAEEGLTLPQDSAMTPP----------------LPLQDTDLSSAPKPVAAATPVSQQ 869
Query: 672 LHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFK 731
L L Q S T P LPL T L ++P + S +
Sbjct: 870 AEEGLTLPQDSAMTPP----------------LPLQDTDLSSAPKPVAAATPVSQQAEEG 913
Query: 732 LPLYQTSLQTSPL 744
L L Q S T+PL
Sbjct: 914 LTLPQDSAMTAPL 926
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 104/321 (32%), Gaps = 80/321 (24%)
Query: 452 LPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLY 511
LPL T L ++P + S + L L Q S+ T PL PL
Sbjct: 606 LPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPL----------------PLQ 649
Query: 512 QTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSL 571
T L ++P + S + L L Q S T PL PL T L
Sbjct: 650 DTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPL----------------PLQDTDL 693
Query: 572 QTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSP 631
++P + S + L L Q S T PL PL T L ++P
Sbjct: 694 SSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPL----------------PLQDTDLSSAP 737
Query: 632 LSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNF 691
+ S + L L Q S T PL PL T L ++P
Sbjct: 738 KPVAAATLVSQQAEEGLTLPQDSAMTPPL----------------PLQDTDLSSAPKPVA 781
Query: 692 TSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNFPSIKLHFKLPLYQTSLQTSPLSNFTSNF 751
+ S + L L Q S T PL PL T L ++P +
Sbjct: 782 AATIVSQQAEEGLTLPQDSAMTPPL----------------PLQDTDLSSAPKPVAAATI 825
Query: 752 PSIKLHFKLPLYQTSLQTSPL 772
S + L L Q S T PL
Sbjct: 826 VSQQAEEGLTLPQDSAMTPPL 846
>sp|Q035Z3|MUTL_LACC3 DNA mismatch repair protein MutL OS=Lactobacillus casei (strain
ATCC 334) GN=mutL PE=3 SV=1
Length = 651
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 KINVKKSKYMRMSKKEHRRLTNIDVNGQVFEEVAKYKYLGSEITNDGRCQVEINKRIGIA 61
+I+VK + S HRR T+++VN F A+ KY+ S+ T G+ V+I R+ +A
Sbjct: 122 QIHVKGGEVEAQSTAAHRRGTDVEVNDLFFNTPARLKYMKSQQTELGKI-VDIVSRLAMA 180
>sp|B3W9W3|MUTL_LACCB DNA mismatch repair protein MutL OS=Lactobacillus casei (strain
BL23) GN=mutL PE=3 SV=1
Length = 651
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 2 KINVKKSKYMRMSKKEHRRLTNIDVNGQVFEEVAKYKYLGSEITNDGRCQVEINKRIGIA 61
+I+VK + S HRR T+++VN F A+ KY+ S+ T G+ V+I R+ +A
Sbjct: 122 QIHVKGGEVEAQSTAAHRRGTDVEVNDLFFNTPARLKYMKSQQTELGKI-VDIVSRLAMA 180
>sp|A8MI62|Y1956_ALKOO UPF0735 ACT domain-containing protein Clos_1956 OS=Alkaliphilus
oremlandii (strain OhILAs) GN=Clos_1956 PE=3 SV=1
Length = 146
Score = 33.9 bits (76), Expect = 5.6, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 18/108 (16%)
Query: 30 VFEEVAKYKYLGSEITNDGRCQVEINKRIGIAKNAFWKHRD----LMTRNISKTTKLRLL 85
+FE+V + K L TN + E K +GI+++AF+K++D L N+ K L L
Sbjct: 17 IFEKVIEAKELLR--TNQVKGVTEATKAVGISRSAFYKYKDYVYTLSDSNVGKKVTLSFL 74
Query: 86 KTYVFSILTYGCEAWTIHPENFPSIKLHFKLPLYQTSLQTSPLSNFTS 133
++ +L+ +++ N +I Q SP++NF +
Sbjct: 75 LSHQAGVLSNVLHIISVNNGNILTIN------------QDSPINNFAN 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 279,225,020
Number of Sequences: 539616
Number of extensions: 11844128
Number of successful extensions: 26812
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 25714
Number of HSP's gapped (non-prelim): 292
length of query: 795
length of database: 191,569,459
effective HSP length: 126
effective length of query: 669
effective length of database: 123,577,843
effective search space: 82673576967
effective search space used: 82673576967
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)