Query psy15339
Match_columns 795
No_of_seqs 173 out of 675
Neff 2.3
Searched_HMMs 13730
Date Fri Aug 16 18:25:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15339.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15339hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1qtwa_ c.1.15.1 (A:) Endonucl 9.2 1.7E+02 0.012 25.0 4.9 30 37-66 1-30 (285)
2 d2dkqa1 b.55.1.2 (A:8-154) Ten 8.2 93 0.0068 26.1 2.6 29 35-63 14-42 (147)
3 d1wvha1 b.55.1.2 (A:1606-1738) 6.4 1.1E+02 0.0083 25.0 2.3 28 35-62 3-30 (133)
4 d1wj1a_ b.55.1.2 (A:) Numb {Mo 6.4 1.5E+02 0.011 24.5 3.0 29 35-63 28-56 (156)
5 d2cc6a1 d.230.2.1 (A:2-65) Fla 6.3 1.2E+02 0.0087 23.5 2.1 29 45-73 10-38 (64)
6 d2ux9a1 d.230.2.1 (A:2-67) Unc 5.8 1.3E+02 0.0097 23.4 2.1 29 45-73 12-40 (66)
7 d1p3ra_ b.55.1.2 (A:) Disabled 4.6 2E+02 0.015 23.4 2.7 28 36-63 20-47 (148)
8 d1ntva_ b.55.1.2 (A:) Disabled 4.5 2.1E+02 0.016 23.2 2.8 28 36-63 21-48 (152)
9 d1oy2a_ b.55.1.2 (A:) Shc adap 4.4 1.4E+02 0.01 26.3 1.6 34 35-68 36-69 (191)
10 d1u6za2 c.55.1.8 (A:12-135) Ex 4.2 5E+02 0.036 20.8 4.9 34 30-63 23-59 (124)
No 1
>d1qtwa_ c.1.15.1 (A:) Endonuclease IV {Escherichia coli [TaxId: 562]}
Probab=9.22 E-value=1.7e+02 Score=24.99 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=22.7
Q ss_pred eEeeCceeccCCCchhhhhHHHhhhhhhhh
Q psy15339 37 YKYLGSEITNDGRCQVEINKRIGIAKNAFW 66 (795)
Q Consensus 37 FKYLGVIIDSDLSFSkHVKaRISKAnaAFg 66 (795)
.||+|++++-.++..+-+++..+.+..++.
T Consensus 1 ~~~~~~h~s~~~~l~~a~~~a~e~G~~~ie 30 (285)
T d1qtwa_ 1 MKYIGAHVSAAGGLANAAIRAAEIDATAFA 30 (285)
T ss_dssp CCEEEEECCCTTCHHHHHHHHHHTTCSEEE
T ss_pred CCcEEEEeccccCHHHHHHHHHHcCCCEEE
Confidence 489999999888888777776666655544
No 2
>d2dkqa1 b.55.1.2 (A:8-154) Tensin {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.21 E-value=93 Score=26.09 Aligned_cols=29 Identities=17% Similarity=0.062 Sum_probs=21.8
Q ss_pred eeeEeeCceeccCCCchhhhhHHHhhhhh
Q psy15339 35 AKYKYLGSEITNDGRCQVEINKRIGIAKN 63 (795)
Q Consensus 35 DSFKYLGVIIDSDLSFSkHVKaRISKAna 63 (795)
-+++|||..--++.+-.+.|.+.+.+.+.
T Consensus 14 ~~V~YLGs~~V~~~~G~~~v~~Av~~l~~ 42 (147)
T d2dkqa1 14 CSVLYLTSVETESLTGPQAVARASSAALS 42 (147)
T ss_dssp EEEEEEEEEECSSCCHHHHHHHHHHHHHH
T ss_pred EEEEEEeEEEcCCCCCHHHHHHHHHHHHH
Confidence 46899999998887777777666665543
No 3
>d1wvha1 b.55.1.2 (A:1606-1738) Tensin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=6.44 E-value=1.1e+02 Score=24.98 Aligned_cols=28 Identities=11% Similarity=0.043 Sum_probs=18.9
Q ss_pred eeeEeeCceeccCCCchhhhhHHHhhhh
Q psy15339 35 AKYKYLGSEITNDGRCQVEINKRIGIAK 62 (795)
Q Consensus 35 DSFKYLGVIIDSDLSFSkHVKaRISKAn 62 (795)
-+++|||+.--++.+-.+.+++-+.+.+
T Consensus 3 ~~V~YLGs~~V~~~~G~~~~~~ai~~l~ 30 (133)
T d1wvha1 3 CNVLFINSVEMESLTGPQAISKAVAETL 30 (133)
T ss_dssp EEEEEEEEEEEETCCHHHHHHHHHHHHH
T ss_pred ceEEEEeEEEeCCCCCHHHHHHHHHHHH
Confidence 4689999997776665666655555443
No 4
>d1wj1a_ b.55.1.2 (A:) Numb {Mouse (Mus musculus) [TaxId: 10090]}
Probab=6.43 E-value=1.5e+02 Score=24.53 Aligned_cols=29 Identities=21% Similarity=0.187 Sum_probs=19.6
Q ss_pred eeeEeeCceeccCCCchhhhhHHHhhhhh
Q psy15339 35 AKYKYLGSEITNDGRCQVEINKRIGIAKN 63 (795)
Q Consensus 35 DSFKYLGVIIDSDLSFSkHVKaRISKAna 63 (795)
=+++|||..--++..-.+.|...|++.+.
T Consensus 28 f~v~YLGs~~v~~~~g~~~v~~ai~~l~~ 56 (156)
T d1wj1a_ 28 FPVKYLGHVEVDESRGMHICEDAVKRLKA 56 (156)
T ss_dssp EEEEEEEEEECSSSCCHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEeCCCCCHHHHHHHHHHHHh
Confidence 46789999887766655566665555443
No 5
>d2cc6a1 d.230.2.1 (A:2-65) Flavin-binding protein dodecin {Archaeon Halobacterium salinarum [TaxId: 2242]}
Probab=6.33 E-value=1.2e+02 Score=23.54 Aligned_cols=29 Identities=10% Similarity=-0.009 Sum_probs=25.9
Q ss_pred ccCCCchhhhhHHHhhhhhhhhccccccc
Q psy15339 45 TNDGRCQVEINKRIGIAKNAFWKHRDLMT 73 (795)
Q Consensus 45 DSDLSFSkHVKaRISKAnaAFgkLRRLwR 73 (795)
.++-+|++.|+.-+.+|.+.+..++..+-
T Consensus 10 ~S~~S~edAi~~Ai~~AskTl~ni~~~eV 38 (64)
T d2cc6a1 10 TSEESFTAAADDAIDRAEDTLDNVVWAEV 38 (64)
T ss_dssp EESSCHHHHHHHHHHHHHHHCSCEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHhhCccCceEEEE
Confidence 57789999999999999999999998763
No 6
>d2ux9a1 d.230.2.1 (A:2-67) Uncharacterized protein TTHA1431 {Thermus thermophilus [TaxId: 274]}
Probab=5.76 E-value=1.3e+02 Score=23.41 Aligned_cols=29 Identities=10% Similarity=0.109 Sum_probs=26.0
Q ss_pred ccCCCchhhhhHHHhhhhhhhhccccccc
Q psy15339 45 TNDGRCQVEINKRIGIAKNAFWKHRDLMT 73 (795)
Q Consensus 45 DSDLSFSkHVKaRISKAnaAFgkLRRLwR 73 (795)
.++-+|++.|+..+.+|.+.+..++..+-
T Consensus 12 ~S~~S~edAi~~Ai~~AskTl~ni~~~eV 40 (66)
T d2ux9a1 12 TSEEGLEAAIQAALARARKTLRHLDWFEV 40 (66)
T ss_dssp EESSCHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cCCCCHHHHHHHHHHHhhhCccCcEEEEE
Confidence 57889999999999999999999998763
No 7
>d1p3ra_ b.55.1.2 (A:) Disabled homolog 2 (Dab2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.56 E-value=2e+02 Score=23.43 Aligned_cols=28 Identities=21% Similarity=0.162 Sum_probs=19.8
Q ss_pred eeEeeCceeccCCCchhhhhHHHhhhhh
Q psy15339 36 KYKYLGSEITNDGRCQVEINKRIGIAKN 63 (795)
Q Consensus 36 SFKYLGVIIDSDLSFSkHVKaRISKAna 63 (795)
.+||||..--.+..-.+.+.+.+.+.+.
T Consensus 20 ~vkYLGs~~V~~~~G~~~~~~Ai~~l~~ 47 (148)
T d1p3ra_ 20 KAKLIGIDDVPDARGDKMSQDSMMKLKG 47 (148)
T ss_dssp EEEEEEEEEESSSCCHHHHHHHHHHHHH
T ss_pred EEEEEEEEEecCCCChHHHHHHHHHHHH
Confidence 7899999877666556666666666543
No 8
>d1ntva_ b.55.1.2 (A:) Disabled homolog 1 (Dab1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.48 E-value=2.1e+02 Score=23.19 Aligned_cols=28 Identities=18% Similarity=0.136 Sum_probs=20.4
Q ss_pred eeEeeCceeccCCCchhhhhHHHhhhhh
Q psy15339 36 KYKYLGSEITNDGRCQVEINKRIGIAKN 63 (795)
Q Consensus 36 SFKYLGVIIDSDLSFSkHVKaRISKAna 63 (795)
.+||||..--....-.+.+++.+.+.+.
T Consensus 21 ~vkYLG~v~V~~~~g~~~~~~ai~~l~~ 48 (152)
T d1ntva_ 21 KAKLIGIDEVSAARGDKLCQDSMMKLKG 48 (152)
T ss_dssp EEEEEEEEECSSSCCHHHHHHHHHHHHH
T ss_pred EEEEEEEEEecCCCCHHHHHHHHHHHHH
Confidence 5899999988776666666666666544
No 9
>d1oy2a_ b.55.1.2 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.41 E-value=1.4e+02 Score=26.34 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=16.7
Q ss_pred eeeEeeCceeccCCCchhhhhHHHhhhhhhhhcc
Q psy15339 35 AKYKYLGSEITNDGRCQVEINKRIGIAKNAFWKH 68 (795)
Q Consensus 35 DSFKYLGVIIDSDLSFSkHVKaRISKAnaAFgkL 68 (795)
=.+||||++--.+-....+-..|...++.|+.++
T Consensus 36 f~akYLGs~eV~~s~r~~~~~~r~~i~~eAI~ri 69 (191)
T d1oy2a_ 36 YLVRYMGCVEVLQSMRALDFNTRTQVTREAISLV 69 (191)
T ss_dssp EEEEEEEEEECCCSSSSSSSCCHHHHHHHHHHHH
T ss_pred EEEEEeeEEEeccccccCcccchHHHHHHHHHHH
Confidence 3579999876432111222233444444444444
No 10
>d1u6za2 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]}
Probab=4.18 E-value=5e+02 Score=20.84 Aligned_cols=34 Identities=15% Similarity=0.068 Sum_probs=22.2
Q ss_pred EEEeEeeeEe---eCceeccCCCchhhhhHHHhhhhh
Q psy15339 30 VFEEVAKYKY---LGSEITNDGRCQVEINKRIGIAKN 63 (795)
Q Consensus 30 ~IEqVDSFKY---LGVIIDSDLSFSkHVKaRISKAna 63 (795)
.++.+.+.|. ||--++.++...++.-.|+-.|-+
T Consensus 23 ~~~~l~~~~~~~rLg~~~~~~g~l~~~~i~~~~~~l~ 59 (124)
T d1u6za2 23 AMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLS 59 (124)
T ss_dssp EEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHH
T ss_pred CeeEeeeeeEEeehhhhccccCCcCHHHHHHHHHHHH
Confidence 4555666665 999998888877765554444433
Done!