Query psy15340
Match_columns 81
No_of_seqs 108 out of 745
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 18:27:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15340.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15340hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j6a_A Protein TRM112; transla 100.0 1.5E-33 5E-38 193.4 5.4 79 1-81 50-135 (141)
2 3q87_A Putative uncharacterize 100.0 1.2E-33 4E-38 190.7 -2.6 75 1-77 44-121 (125)
3 2jny_A Uncharacterized BCR; st 99.5 1.9E-14 6.5E-19 87.7 2.3 34 47-80 20-53 (67)
4 2jr6_A UPF0434 protein NMA0874 99.4 3.2E-14 1.1E-18 86.8 2.3 34 47-80 18-51 (68)
5 2hf1_A Tetraacyldisaccharide-1 99.4 3E-14 1E-18 86.9 1.6 34 47-80 18-51 (68)
6 2js4_A UPF0434 protein BB2007; 99.4 3.6E-14 1.2E-18 87.0 1.7 34 47-80 18-51 (70)
7 2pk7_A Uncharacterized protein 99.4 5.3E-14 1.8E-18 86.1 1.5 34 47-80 18-51 (69)
8 2k5r_A Uncharacterized protein 99.3 2.4E-13 8.3E-18 88.0 0.7 32 49-80 47-78 (97)
9 2kpi_A Uncharacterized protein 99.3 1.9E-12 6.5E-17 76.2 2.7 28 53-80 24-53 (56)
10 1pft_A TFIIB, PFTFIIBN; N-term 95.7 0.0064 2.2E-07 33.6 2.3 21 47-67 16-36 (50)
11 1weo_A Cellulose synthase, cat 91.4 0.041 1.4E-06 35.0 0.3 38 42-79 45-82 (93)
12 1dl6_A Transcription factor II 88.5 0.2 6.8E-06 28.7 1.6 20 47-66 22-41 (58)
13 2jrr_A Uncharacterized protein 84.2 0.4 1.4E-05 28.7 1.3 33 43-75 26-60 (67)
14 2i5o_A DNA polymerase ETA; zin 81.7 0.69 2.3E-05 24.8 1.5 15 54-68 8-22 (39)
15 3a43_A HYPD, hydrogenase nicke 80.5 1 3.6E-05 29.5 2.5 26 44-69 59-84 (139)
16 2k5c_A Uncharacterized protein 80.0 1.3 4.3E-05 28.0 2.6 46 4-67 17-63 (95)
17 2kdx_A HYPA, hydrogenase/ureas 79.1 1.3 4.4E-05 28.0 2.5 25 45-69 63-87 (119)
18 2m0f_A Zinc finger and BTB dom 77.7 0.95 3.3E-05 19.6 1.2 13 55-67 2-14 (29)
19 2jz8_A Uncharacterized protein 77.3 0.91 3.1E-05 28.4 1.3 23 52-74 45-67 (87)
20 2jvm_A Uncharacterized protein 75.5 0.6 2E-05 28.8 0.1 31 42-72 38-70 (80)
21 2e72_A POGO transposable eleme 74.5 0.7 2.4E-05 26.2 0.2 16 54-69 11-26 (49)
22 2m0d_A Zinc finger and BTB dom 74.4 1.4 4.8E-05 19.0 1.3 14 55-68 3-16 (30)
23 2kvh_A Zinc finger and BTB dom 73.0 1.6 5.4E-05 18.9 1.2 14 55-68 3-16 (27)
24 1rik_A E6APC1 peptide; E6-bind 70.2 1.8 6.2E-05 18.7 1.1 14 56-69 3-16 (29)
25 1znf_A 31ST zinc finger from X 69.7 1.6 5.6E-05 18.6 0.9 13 56-68 2-14 (27)
26 1vyx_A ORF K3, K3RING; zinc-bi 69.0 0.4 1.4E-05 27.2 -1.7 28 41-68 32-60 (60)
27 1ard_A Yeast transcription fac 68.9 1.6 5.4E-05 18.9 0.7 13 56-68 3-15 (29)
28 2m0e_A Zinc finger and BTB dom 68.9 1.6 5.6E-05 18.7 0.8 14 56-69 3-16 (29)
29 2kvf_A Zinc finger and BTB dom 67.8 2.3 7.9E-05 18.3 1.2 14 55-68 3-16 (28)
30 2kvg_A Zinc finger and BTB dom 67.8 2 7E-05 18.7 1.0 14 55-68 3-16 (27)
31 2lvu_A Zinc finger and BTB dom 70.3 1.2 4E-05 19.2 0.0 15 56-70 3-17 (26)
32 1paa_A Yeast transcription fac 66.2 2.1 7.1E-05 18.7 0.9 14 56-69 3-16 (30)
33 2elx_A Zinc finger protein 406 65.8 2.5 8.4E-05 19.2 1.1 15 54-68 6-20 (35)
34 1klr_A Zinc finger Y-chromosom 64.6 2.1 7.2E-05 18.4 0.7 13 56-68 3-15 (30)
35 1twf_L ABC10-alpha, DNA-direct 64.3 3.4 0.00011 24.5 1.7 19 54-72 27-45 (70)
36 2odx_A Cytochrome C oxidase po 63.9 3.5 0.00012 25.1 1.7 23 46-68 46-69 (80)
37 2elo_A Zinc finger protein 406 63.0 2.6 8.8E-05 19.5 0.9 16 53-68 7-22 (37)
38 1v54_F VI, cytochrome C oxidas 62.6 3.5 0.00012 26.0 1.6 23 46-68 69-92 (98)
39 2lvt_A Zinc finger and BTB dom 66.4 1.6 5.5E-05 19.1 0.0 15 56-70 3-17 (29)
40 3k1f_M Transcription initiatio 62.3 4.6 0.00016 28.6 2.3 19 47-65 34-52 (197)
41 2akl_A PHNA-like protein PA012 61.9 2.8 9.6E-05 28.2 1.1 14 53-66 42-55 (138)
42 1srk_A Zinc finger protein ZFP 61.5 3.6 0.00012 18.7 1.2 16 53-68 5-20 (35)
43 2elm_A Zinc finger protein 406 61.4 3.4 0.00012 19.4 1.1 16 53-68 7-22 (37)
44 2elp_A Zinc finger protein 406 60.9 3.6 0.00012 19.0 1.2 16 53-68 7-22 (37)
45 2els_A Zinc finger protein 406 60.7 3.8 0.00013 18.8 1.3 15 54-68 8-22 (36)
46 2elt_A Zinc finger protein 406 60.2 3.7 0.00013 18.7 1.1 16 53-68 7-22 (36)
47 2elr_A Zinc finger protein 406 60.1 3.1 0.00011 19.0 0.9 16 53-68 7-22 (36)
48 2lvr_A Zinc finger and BTB dom 64.4 1.9 6.3E-05 18.8 0.0 16 55-70 3-18 (30)
49 1p7a_A BF3, BKLF, kruppel-like 60.0 3 0.0001 19.3 0.8 16 53-68 9-24 (37)
50 2elv_A Zinc finger protein 406 58.5 4.3 0.00015 18.6 1.2 16 53-68 7-22 (36)
51 2kfq_A FP1; protein, de novo p 58.3 2.8 9.6E-05 19.1 0.5 15 56-70 3-17 (32)
52 4bbr_M Transcription initiatio 58.2 5.4 0.00018 29.5 2.2 17 49-65 36-52 (345)
53 1njq_A Superman protein; zinc- 57.7 4.3 0.00015 19.1 1.2 15 54-68 5-19 (39)
54 2elq_A Zinc finger protein 406 57.3 4.4 0.00015 18.6 1.1 16 53-68 7-22 (36)
55 2drp_A Protein (tramtrack DNA- 56.1 6.6 0.00023 20.5 1.9 13 54-66 9-21 (66)
56 1rim_A E6APC2 peptide; E6-bind 55.2 3.9 0.00013 18.8 0.7 13 56-68 3-15 (33)
57 2y69_F Cytochrome C oxidase su 54.8 4.8 0.00017 26.6 1.4 22 47-68 101-123 (129)
58 3mjh_B Early endosome antigen 54.7 4.5 0.00016 20.9 1.0 13 53-66 4-16 (34)
59 2epv_A Zinc finger protein 268 54.6 5.3 0.00018 19.4 1.2 17 52-68 9-25 (44)
60 1vq8_Z 50S ribosomal protein L 54.5 8.2 0.00028 23.4 2.3 18 48-65 38-55 (83)
61 2ecv_A Tripartite motif-contai 54.4 7.1 0.00024 21.7 1.9 25 54-78 58-82 (85)
62 2el5_A Zinc finger protein 268 54.4 4.6 0.00016 19.2 1.0 16 53-68 8-23 (42)
63 2emb_A Zinc finger protein 473 54.3 5.1 0.00018 19.3 1.1 17 52-68 9-25 (44)
64 2eox_A Zinc finger protein 473 53.9 5.1 0.00018 19.3 1.1 18 52-69 9-26 (44)
65 2epc_A Zinc finger protein 32; 53.4 5.6 0.00019 18.8 1.2 17 52-68 8-24 (42)
66 3iuf_A Zinc finger protein UBI 53.2 5.2 0.00018 20.2 1.1 15 54-68 6-20 (48)
67 1mzb_A Ferric uptake regulatio 53.1 5.3 0.00018 25.2 1.3 15 55-69 91-105 (136)
68 2yts_A Zinc finger protein 484 53.1 5.6 0.00019 19.3 1.2 17 52-68 9-25 (46)
69 2jsp_A Transcriptional regulat 52.9 5.4 0.00018 24.8 1.3 18 50-67 16-33 (87)
70 2emi_A Zinc finger protein 484 52.9 5.6 0.00019 19.3 1.2 17 52-68 9-25 (46)
71 2ecw_A Tripartite motif-contai 52.4 7.3 0.00025 21.7 1.7 24 54-77 58-81 (85)
72 2em4_A Zinc finger protein 28 52.3 6 0.00021 19.3 1.2 17 52-68 9-25 (46)
73 2yu5_A Zinc finger protein 473 51.8 5.6 0.00019 19.2 1.0 17 52-68 9-25 (44)
74 1vd4_A Transcription initiatio 51.7 8.3 0.00028 20.5 1.8 21 50-70 34-54 (62)
75 2eoy_A Zinc finger protein 473 51.7 6.4 0.00022 19.2 1.3 17 52-68 9-25 (46)
76 2ept_A Zinc finger protein 32; 51.7 6.6 0.00023 18.5 1.3 16 53-68 8-23 (41)
77 2l8e_A Polyhomeotic-like prote 51.7 6.3 0.00022 21.8 1.3 21 49-69 12-32 (49)
78 2ytb_A Zinc finger protein 32; 51.1 5 0.00017 19.0 0.8 16 53-68 9-24 (42)
79 2emj_A Zinc finger protein 28 50.9 6.1 0.00021 19.3 1.1 16 53-68 10-25 (46)
80 2emx_A Zinc finger protein 268 50.9 6.4 0.00022 18.9 1.2 16 53-68 8-23 (44)
81 2en2_A B-cell lymphoma 6 prote 50.6 6.5 0.00022 18.6 1.1 16 53-68 9-24 (42)
82 2eow_A Zinc finger protein 347 50.5 6.6 0.00023 19.0 1.2 16 53-68 10-25 (46)
83 2yrj_A Zinc finger protein 473 50.5 6.9 0.00024 18.9 1.3 17 52-68 9-25 (46)
84 1fv5_A First zinc finger of U- 50.1 5.6 0.00019 20.0 0.9 16 53-68 6-21 (36)
85 2eoj_A Zinc finger protein 268 49.9 4.9 0.00017 19.3 0.6 16 53-68 10-25 (44)
86 2em3_A Zinc finger protein 28 49.9 6.7 0.00023 19.0 1.2 17 52-68 9-25 (46)
87 2em8_A Zinc finger protein 224 49.6 7 0.00024 19.0 1.2 17 52-68 9-25 (46)
88 2yte_A Zinc finger protein 473 49.5 5 0.00017 19.0 0.6 16 53-68 8-23 (42)
89 2ene_A Zinc finger protein 347 49.3 6.7 0.00023 19.0 1.1 17 52-68 9-25 (46)
90 2fe3_A Peroxide operon regulat 49.2 6.9 0.00024 25.0 1.4 16 55-70 93-108 (145)
91 1yui_A GAGA-factor; complex (D 49.1 7.1 0.00024 19.9 1.2 16 53-68 22-37 (54)
92 2emg_A Zinc finger protein 484 49.1 5.8 0.0002 19.3 0.8 16 53-68 10-25 (46)
93 2eos_A B-cell lymphoma 6 prote 49.0 6.1 0.00021 18.8 0.9 16 53-68 9-24 (42)
94 2eoo_A ZFP-95, zinc finger pro 49.0 7.3 0.00025 18.9 1.2 16 53-68 10-25 (46)
95 2eml_A Zinc finger protein 28 48.9 7.1 0.00024 18.9 1.2 17 52-68 9-25 (46)
96 3mwm_A ZUR, putative metal upt 48.9 6.8 0.00023 24.9 1.3 15 55-69 87-101 (139)
97 2eof_A Zinc finger protein 268 48.8 6.7 0.00023 18.7 1.0 17 52-68 9-25 (44)
98 2enf_A Zinc finger protein 347 48.8 5.8 0.0002 19.3 0.8 16 53-68 10-25 (46)
99 2em5_A ZFP-95, zinc finger pro 48.7 7.4 0.00025 18.9 1.2 16 53-68 10-25 (46)
100 2ysp_A Zinc finger protein 224 48.7 6.7 0.00023 19.0 1.0 17 52-68 9-25 (46)
101 2en9_A Zinc finger protein 28 48.6 5.8 0.0002 19.4 0.8 17 52-68 9-25 (46)
102 2yto_A Zinc finger protein 484 48.5 7.7 0.00026 18.9 1.3 17 52-68 9-25 (46)
103 2ytp_A Zinc finger protein 484 48.4 7.2 0.00025 19.0 1.1 16 53-68 10-25 (46)
104 2em9_A Zinc finger protein 224 48.3 7.4 0.00025 18.8 1.2 17 52-68 9-25 (46)
105 2emy_A Zinc finger protein 268 48.3 7.8 0.00027 18.8 1.3 17 52-68 9-25 (46)
106 2ep3_A Zinc finger protein 484 48.1 7.8 0.00027 18.8 1.2 16 53-68 10-25 (46)
107 2eoz_A Zinc finger protein 473 48.1 6.7 0.00023 19.1 1.0 16 53-68 10-25 (46)
108 2yso_A ZFP-95, zinc finger pro 48.0 7.1 0.00024 18.9 1.1 17 52-68 9-25 (46)
109 2epw_A Zinc finger protein 268 47.8 7.8 0.00027 18.7 1.2 17 52-68 9-25 (46)
110 2em7_A Zinc finger protein 224 47.7 7.1 0.00024 18.9 1.0 16 53-68 10-25 (46)
111 2eou_A Zinc finger protein 473 47.7 5.9 0.0002 19.1 0.7 16 53-68 10-25 (44)
112 2em2_A Zinc finger protein 28 47.6 7.7 0.00026 18.9 1.2 17 52-68 9-25 (46)
113 2egp_A Tripartite motif-contai 47.5 8.4 0.00029 21.3 1.5 24 54-77 52-75 (79)
114 2ytk_A Zinc finger protein 347 47.3 7.5 0.00025 18.8 1.1 17 52-68 9-25 (46)
115 2eon_A ZFP-95, zinc finger pro 47.3 5.6 0.00019 19.5 0.6 17 52-68 9-25 (46)
116 2en6_A Zinc finger protein 268 47.2 7.5 0.00026 18.8 1.1 17 52-68 9-25 (46)
117 2d8s_A Cellular modulator of i 47.0 7.9 0.00027 22.8 1.3 19 54-72 57-75 (80)
118 3eyy_A Putative iron uptake re 47.0 7 0.00024 25.0 1.2 15 55-69 90-104 (145)
119 3k7a_M Transcription initiatio 46.9 5 0.00017 29.4 0.5 18 48-65 35-52 (345)
120 2ytg_A ZFP-95, zinc finger pro 46.9 7.9 0.00027 18.7 1.1 18 52-69 9-26 (46)
121 2eor_A Zinc finger protein 224 46.8 8.3 0.00029 18.6 1.2 16 53-68 10-25 (46)
122 2xig_A Ferric uptake regulatio 46.7 7.6 0.00026 25.0 1.3 16 54-69 98-113 (150)
123 2enh_A Zinc finger protein 28 46.6 6.7 0.00023 19.1 0.9 16 53-68 10-25 (46)
124 2ytf_A Zinc finger protein 268 46.5 7.8 0.00027 18.7 1.1 16 53-68 10-25 (46)
125 2eov_A Zinc finger protein 484 46.4 6.7 0.00023 19.0 0.8 16 53-68 10-25 (46)
126 2ytj_A Zinc finger protein 484 46.4 8.6 0.00029 18.6 1.2 16 53-68 10-25 (46)
127 2eq1_A Zinc finger protein 347 46.2 6.2 0.00021 19.2 0.7 16 53-68 10-25 (46)
128 2emf_A Zinc finger protein 484 46.1 7.5 0.00025 18.9 1.0 17 52-68 9-25 (46)
129 2ema_A Zinc finger protein 347 45.9 7.8 0.00027 18.8 1.0 16 53-68 10-25 (46)
130 2emh_A Zinc finger protein 484 45.9 8.1 0.00028 18.7 1.1 16 53-68 10-25 (46)
131 2en3_A ZFP-95, zinc finger pro 45.8 8.1 0.00028 18.7 1.1 16 53-68 10-25 (46)
132 4ets_A Ferric uptake regulatio 45.8 8 0.00027 25.4 1.3 15 55-69 107-121 (162)
133 2el4_A Zinc finger protein 268 45.6 8.2 0.00028 18.6 1.1 16 53-68 10-25 (46)
134 3j20_Y 30S ribosomal protein S 45.4 9.5 0.00033 21.0 1.4 14 52-65 34-47 (50)
135 2elz_A Zinc finger protein 224 45.4 7 0.00024 19.0 0.8 17 52-68 9-25 (46)
136 2eme_A Zinc finger protein 473 45.3 9.1 0.00031 18.4 1.2 16 53-68 10-25 (46)
137 2yu8_A Zinc finger protein 347 45.3 9.1 0.00031 18.5 1.2 16 53-68 10-25 (46)
138 2w57_A Ferric uptake regulatio 45.2 8.3 0.00028 24.8 1.3 15 55-69 90-104 (150)
139 2em6_A Zinc finger protein 224 45.1 7.3 0.00025 18.9 0.8 16 53-68 10-25 (46)
140 2emp_A Zinc finger protein 347 45.0 8.2 0.00028 18.7 1.0 16 53-68 10-25 (46)
141 1t1h_A Gspef-atpub14, armadill 45.0 4.2 0.00014 22.8 -0.1 24 53-76 41-64 (78)
142 2en8_A Zinc finger protein 224 45.0 9.1 0.00031 18.4 1.2 16 53-68 10-25 (46)
143 2emm_A ZFP-95, zinc finger pro 44.7 8.4 0.00029 18.6 1.0 16 53-68 10-25 (46)
144 2epx_A Zinc finger protein 28 44.4 7.5 0.00026 18.8 0.8 16 53-68 10-25 (47)
145 2en7_A Zinc finger protein 268 44.4 5.9 0.0002 18.9 0.4 16 53-68 10-25 (44)
146 1g25_A CDK-activating kinase a 44.3 8.6 0.00029 20.8 1.1 23 53-75 41-63 (65)
147 2ely_A Zinc finger protein 224 44.2 7.5 0.00026 18.9 0.8 18 52-69 9-26 (46)
148 2epu_A Zinc finger protein 32; 43.9 9.2 0.00032 18.5 1.1 16 53-68 10-25 (45)
149 2en1_A Zinc finger protein 224 43.8 9.3 0.00032 18.5 1.1 16 53-68 10-25 (46)
150 2ab3_A ZNF29; zinc finger prot 43.6 9.2 0.00031 16.1 1.0 13 56-68 3-17 (29)
151 2ep2_A Zinc finger protein 484 43.6 8.7 0.0003 18.6 1.0 16 53-68 10-25 (46)
152 1v87_A Deltex protein 2; ring- 43.3 9.5 0.00032 22.8 1.3 19 53-71 80-98 (114)
153 2eoh_A Zinc finger protein 28 43.0 7 0.00024 19.0 0.6 16 53-68 10-25 (46)
154 2yth_A Zinc finger protein 224 43.0 7.8 0.00027 18.8 0.7 16 53-68 10-25 (46)
155 2eq3_A Zinc finger protein 347 42.9 7.7 0.00026 18.7 0.7 16 53-68 10-25 (46)
156 2yti_A Zinc finger protein 347 42.9 8 0.00027 18.7 0.8 16 53-68 10-25 (46)
157 2enc_A Zinc finger protein 224 42.8 11 0.00036 18.3 1.2 17 52-68 9-25 (46)
158 2ep1_A Zinc finger protein 484 42.7 6.8 0.00023 18.9 0.5 16 53-68 10-25 (46)
159 3dqy_A Toluene 1,2-dioxygenase 42.7 13 0.00045 22.1 1.9 25 50-74 53-77 (106)
160 2el6_A Zinc finger protein 268 42.7 10 0.00035 18.4 1.2 16 53-68 10-25 (46)
161 2epz_A Zinc finger protein 28 42.6 7.7 0.00026 18.8 0.7 16 53-68 10-25 (46)
162 2ytn_A Zinc finger protein 347 42.5 8.3 0.00028 18.7 0.8 16 53-68 10-25 (46)
163 2emz_A ZFP-95, zinc finger pro 42.5 6.8 0.00023 19.1 0.5 16 53-68 10-25 (46)
164 2eq0_A Zinc finger protein 347 42.4 11 0.00038 18.2 1.3 16 53-68 10-25 (46)
165 2xeu_A Ring finger protein 4; 42.1 8.3 0.00029 20.3 0.8 20 55-74 44-63 (64)
166 2emk_A Zinc finger protein 28 42.0 8.6 0.00029 18.7 0.8 16 53-68 10-25 (46)
167 2eq2_A Zinc finger protein 347 41.9 8.4 0.00029 18.7 0.8 16 53-68 10-25 (46)
168 2eop_A Zinc finger protein 268 41.7 8.7 0.0003 18.5 0.8 16 53-68 10-25 (46)
169 2ep0_A Zinc finger protein 28 41.3 11 0.00039 18.1 1.2 16 53-68 10-25 (46)
170 6rxn_A Rubredoxin; electron tr 41.3 10 0.00036 20.6 1.1 18 55-72 4-21 (46)
171 2eoe_A Zinc finger protein 347 41.1 8.1 0.00028 18.6 0.6 16 53-68 10-25 (46)
172 2ytd_A Zinc finger protein 473 41.1 11 0.00037 18.2 1.1 16 53-68 10-25 (46)
173 3ng2_A RNF4, snurf, ring finge 41.0 14 0.00047 20.0 1.6 21 55-75 51-71 (71)
174 2lv2_A Insulinoma-associated p 41.0 9.2 0.00031 22.5 0.9 17 52-68 25-41 (85)
175 2wx3_A MRNA-decapping enzyme 1 40.2 11 0.00037 21.4 1.1 16 32-47 24-39 (51)
176 2eq4_A Zinc finger protein 224 40.1 8.6 0.00029 18.5 0.6 16 53-68 10-25 (46)
177 2yrm_A B-cell lymphoma 6 prote 39.7 10 0.00034 18.3 0.8 16 53-68 8-23 (43)
178 2em0_A Zinc finger protein 224 39.4 9 0.00031 18.5 0.6 16 53-68 10-25 (46)
179 2eoq_A Zinc finger protein 224 39.2 8.6 0.00029 18.6 0.5 16 53-68 10-25 (46)
180 2eom_A ZFP-95, zinc finger pro 38.8 9.6 0.00033 18.5 0.7 16 53-68 10-25 (46)
181 2lcq_A Putative toxin VAPC6; P 38.4 12 0.0004 24.4 1.2 14 55-68 132-145 (165)
182 2epr_A POZ-, at HOOK-, and zin 38.4 13 0.00043 18.3 1.1 16 53-68 10-25 (48)
183 1sp2_A SP1F2; zinc finger, tra 38.3 11 0.00036 16.5 0.8 13 56-68 3-17 (31)
184 3flo_B DNA polymerase alpha ca 38.3 13 0.00044 26.0 1.5 17 55-72 22-38 (206)
185 2ytr_A Zinc finger protein 347 38.3 7.4 0.00025 18.8 0.2 16 53-68 10-25 (46)
186 2ytq_A Zinc finger protein 268 38.2 9.6 0.00033 18.5 0.6 16 53-68 10-25 (46)
187 1f2i_G Fusion of N-terminal 17 38.1 13 0.00045 19.7 1.2 17 52-68 46-62 (73)
188 1wii_A Hypothetical UPF0222 pr 38.1 13 0.00043 22.8 1.3 16 52-67 44-59 (85)
189 2o03_A Probable zinc uptake re 37.6 13 0.00044 23.2 1.3 16 54-69 82-97 (131)
190 3uk3_C Zinc finger protein 217 37.6 14 0.00048 18.5 1.2 17 53-69 30-46 (57)
191 2wx4_A DCP1, decapping protein 37.5 8 0.00027 21.5 0.3 16 33-48 23-38 (46)
192 2v3b_B Rubredoxin 2, rubredoxi 37.1 21 0.00071 19.9 2.0 18 55-72 3-20 (55)
193 2qpz_A Naphthalene 1,2-dioxyge 37.1 18 0.00062 21.3 1.9 24 50-73 55-78 (103)
194 2ct1_A Transcriptional repress 36.2 14 0.00046 20.0 1.1 12 55-66 15-26 (77)
195 1bbo_A Human enhancer-binding 36.0 15 0.00051 18.4 1.2 16 53-68 27-42 (57)
196 2ytm_A Zinc finger protein 28 35.9 9.5 0.00033 18.6 0.4 16 53-68 10-25 (46)
197 1yk4_A Rubredoxin, RD; electro 35.7 22 0.00075 19.6 1.9 18 55-72 2-19 (52)
198 2epq_A POZ-, at HOOK-, and zin 35.3 12 0.00041 18.0 0.7 16 53-68 8-23 (45)
199 2adr_A ADR1; transcription reg 35.1 16 0.00054 18.5 1.2 17 53-69 28-44 (60)
200 1gh9_A 8.3 kDa protein (gene M 35.1 15 0.0005 21.8 1.2 13 56-69 5-17 (71)
201 3h0g_I DNA-directed RNA polyme 34.9 22 0.00076 22.2 2.1 16 55-70 26-41 (113)
202 1e8j_A Rubredoxin; iron-sulfur 34.4 23 0.00078 19.5 1.9 18 55-72 3-20 (52)
203 3na7_A HP0958; flagellar bioge 34.1 15 0.0005 25.8 1.2 13 53-65 220-232 (256)
204 3gce_A Ferredoxin component of 34.1 22 0.00076 21.8 2.0 26 50-75 64-89 (121)
205 2nn6_I 3'-5' exoribonuclease C 34.0 17 0.00058 25.1 1.5 15 52-66 182-196 (209)
206 2ytt_A Zinc finger protein 473 33.8 14 0.00047 17.9 0.8 16 53-68 10-25 (46)
207 1s5p_A NAD-dependent deacetyla 33.4 21 0.00071 24.7 1.9 26 46-71 104-129 (235)
208 1x6e_A Zinc finger protein 24; 33.2 18 0.00062 19.2 1.3 15 53-67 12-26 (72)
209 1x5w_A Zinc finger protein 64, 33.2 17 0.00058 19.1 1.2 13 55-67 9-21 (70)
210 1bor_A Transcription factor PM 33.1 11 0.00036 20.2 0.3 19 54-72 36-54 (56)
211 2yt9_A Zinc finger-containing 33.0 18 0.00061 19.9 1.3 13 54-66 6-18 (95)
212 3h0g_L DNA-directed RNA polyme 32.8 15 0.00053 21.3 1.0 23 53-75 36-58 (63)
213 2d9h_A Zinc finger protein 692 32.8 18 0.00061 19.4 1.2 12 55-66 7-18 (78)
214 2i7f_A Ferredoxin component of 32.6 23 0.00079 21.0 1.8 24 50-73 56-79 (108)
215 1dx8_A Rubredoxin; electron tr 32.6 27 0.00093 20.4 2.1 19 54-72 6-24 (70)
216 2eps_A POZ-, at HOOK-, and zin 32.2 20 0.00067 18.1 1.3 15 53-67 10-24 (54)
217 2kn9_A Rubredoxin; metalloprot 32.1 26 0.0009 21.2 2.0 19 54-72 26-44 (81)
218 1qyp_A RNA polymerase II; tran 32.0 21 0.00071 19.5 1.4 13 55-67 43-55 (57)
219 2lce_A B-cell lymphoma 6 prote 31.4 15 0.00052 19.6 0.8 15 53-67 15-29 (74)
220 4rxn_A Rubredoxin; electron tr 31.4 27 0.00094 19.5 1.9 18 55-72 3-20 (54)
221 2ctu_A Zinc finger protein 483 31.2 28 0.00096 17.9 1.9 20 52-71 15-34 (73)
222 1k81_A EIF-2-beta, probable tr 31.2 15 0.0005 18.8 0.6 14 55-68 21-34 (36)
223 3qxb_A Putative xylose isomera 31.2 72 0.0025 21.8 4.4 17 4-20 263-279 (316)
224 3m7n_A Putative uncharacterize 30.6 20 0.00067 24.0 1.4 15 52-66 153-167 (179)
225 2de6_D Ferredoxin component of 30.6 26 0.0009 21.2 1.9 24 50-73 57-80 (115)
226 1b0n_B Protein (SINI protein); 30.4 28 0.00097 19.7 1.8 16 5-20 13-28 (57)
227 2ctd_A Zinc finger protein 512 30.4 20 0.00069 20.9 1.2 14 52-65 31-44 (96)
228 2gqj_A Zinc finger protein KIA 30.3 15 0.00051 21.1 0.7 15 52-66 21-35 (98)
229 2kmk_A Zinc finger protein GFI 30.0 21 0.00072 18.9 1.2 16 53-68 55-70 (82)
230 1zr9_A Zinc finger protein 593 29.4 16 0.00055 23.7 0.7 16 51-66 46-61 (124)
231 1zfd_A SWI5; DNA binding motif 29.3 18 0.00063 15.7 0.8 13 56-68 4-18 (32)
232 2lt7_A Transcriptional regulat 29.0 26 0.00089 21.7 1.7 17 52-68 17-35 (133)
233 2wbs_A Krueppel-like factor 4; 28.9 23 0.00077 19.2 1.2 17 52-68 62-78 (89)
234 2ct7_A Ring finger protein 31; 28.7 26 0.00089 20.6 1.5 11 56-66 44-54 (86)
235 1x6h_A Transcriptional repress 28.7 18 0.00061 19.5 0.8 12 55-66 15-26 (86)
236 1s24_A Rubredoxin 2; electron 28.5 30 0.001 21.3 1.8 20 53-72 33-52 (87)
237 2b9d_A E7 protein; zinc finger 27.9 27 0.00091 19.4 1.4 27 33-63 23-49 (52)
238 1a1h_A QGSR zinc finger peptid 27.6 25 0.00086 19.0 1.3 16 53-68 60-75 (90)
239 3pwf_A Rubrerythrin; non heme 27.3 24 0.00083 23.6 1.4 19 53-73 136-154 (170)
240 2l9z_A PR domain zinc finger p 27.2 28 0.00096 18.6 1.3 25 54-78 10-37 (39)
241 1jm7_A BRCA1, breast cancer ty 27.1 23 0.00079 20.8 1.1 23 53-75 56-78 (112)
242 3o9x_A Uncharacterized HTH-typ 26.7 17 0.00059 22.2 0.5 11 54-64 1-11 (133)
243 4gzn_C ZFP-57, zinc finger pro 26.7 26 0.0009 19.0 1.2 9 57-65 6-14 (60)
244 2epp_A POZ-, at HOOK-, and zin 26.6 19 0.00066 20.2 0.7 16 53-68 11-26 (66)
245 1m2k_A Silent information regu 26.4 27 0.00091 24.4 1.5 26 44-69 110-135 (249)
246 2cot_A Zinc finger protein 435 26.1 26 0.00088 18.7 1.1 18 52-69 43-60 (77)
247 2djb_A Polycomb group ring fin 25.7 30 0.001 18.9 1.4 19 55-73 50-68 (72)
248 2con_A RUH-035 protein, NIN on 25.5 20 0.00068 21.7 0.6 21 44-64 19-39 (79)
249 3sr0_A Adenylate kinase; phosp 25.3 30 0.001 23.2 1.6 21 52-72 121-141 (206)
250 3u31_A SIR2A, transcriptional 25.1 29 0.00098 25.2 1.5 24 46-69 145-168 (290)
251 2ct2_A Tripartite motif protei 25.0 33 0.0011 19.1 1.5 25 51-75 11-35 (88)
252 1e4u_A Transcriptional repress 24.8 45 0.0015 19.2 2.1 17 53-69 48-64 (78)
253 1ncs_A Peptide M30F, transcrip 24.7 34 0.0012 16.7 1.4 20 50-69 13-34 (47)
254 1twf_I B12.6, DNA-directed RNA 24.5 30 0.001 21.9 1.3 18 53-70 24-41 (122)
255 1va1_A Transcription factor SP 24.5 34 0.0012 15.6 1.3 15 54-68 7-23 (37)
256 3ttc_A HYPF, transcriptional r 24.4 25 0.00085 28.5 1.1 18 56-73 40-57 (657)
257 2dmd_A Zinc finger protein 64, 24.3 24 0.00081 19.4 0.8 13 54-66 7-19 (96)
258 1lv3_A Hypothetical protein YA 24.3 30 0.001 20.4 1.2 15 54-68 8-22 (68)
259 4g9i_A Hydrogenase maturation 24.2 27 0.00093 28.7 1.3 18 56-73 129-146 (772)
260 3sp4_A Aprataxin-like protein; 24.1 26 0.00089 24.5 1.1 14 53-66 167-180 (204)
261 1bhi_A CRE-BP1, ATF-2; CRE bin 24.0 34 0.0012 15.4 1.2 15 54-68 5-21 (38)
262 1vm9_A Toluene-4-monooxygenase 23.8 42 0.0014 19.9 1.9 24 50-73 55-78 (111)
263 1x4s_A Protein FON, zinc finge 23.7 26 0.0009 20.1 0.9 14 52-65 23-36 (59)
264 1m3v_A FLIN4, fusion of the LI 23.6 28 0.00096 21.3 1.0 23 50-72 98-120 (122)
265 1llm_C Chimera of ZIF23-GCN4; 23.5 33 0.0011 18.8 1.3 11 56-66 32-42 (88)
266 1fqt_A Rieske-type ferredoxin 23.3 44 0.0015 20.0 1.9 23 51-73 59-81 (112)
267 3ga8_A HTH-type transcriptiona 23.2 31 0.0011 19.8 1.2 13 54-66 35-47 (78)
268 2dlk_A Novel protein; ZF-C2H2 22.9 23 0.00078 18.8 0.5 12 54-65 67-78 (79)
269 1l1o_C Replication protein A 7 22.6 42 0.0014 22.3 1.8 15 52-66 59-73 (181)
270 2csh_A Zinc finger protein 297 22.5 35 0.0012 19.3 1.3 17 52-68 62-78 (110)
271 3vth_A Hydrogenase maturation 22.3 29 0.00097 28.6 1.1 18 56-73 134-151 (761)
272 2ysl_A Tripartite motif-contai 22.0 32 0.0011 18.6 1.0 15 54-68 56-70 (73)
273 1x4j_A Ring finger protein 38; 21.8 35 0.0012 18.7 1.2 14 57-70 62-75 (75)
274 1ma3_A SIR2-AF2, transcription 21.8 40 0.0014 23.5 1.7 26 44-69 112-137 (253)
275 2dmi_A Teashirt homolog 3; zin 21.7 36 0.0012 19.5 1.2 13 54-66 18-30 (115)
276 4ap4_A E3 ubiquitin ligase RNF 21.4 39 0.0013 20.0 1.4 23 55-77 48-70 (133)
277 1lko_A Rubrerythrin all-iron(I 21.4 31 0.001 23.2 1.0 12 55-66 155-166 (191)
278 2ebt_A Krueppel-like factor 5; 21.3 31 0.001 19.0 0.8 16 53-68 73-88 (100)
279 2eod_A TNF receptor-associated 21.3 43 0.0015 17.4 1.4 11 56-66 11-21 (66)
280 2kr4_A Ubiquitin conjugation f 21.1 35 0.0012 19.7 1.1 21 55-75 48-68 (85)
281 2gmg_A Hypothetical protein PF 20.9 39 0.0013 21.5 1.3 12 54-65 66-77 (105)
282 1iym_A EL5; ring-H2 finger, ub 20.5 34 0.0012 17.4 0.8 13 55-67 43-55 (55)
283 1yc5_A NAD-dependent deacetyla 20.5 37 0.0013 23.5 1.2 25 44-68 110-134 (246)
284 2dlq_A GLI-kruppel family memb 20.4 41 0.0014 19.2 1.3 17 52-68 63-79 (124)
285 1tfi_A Transcriptional elongat 20.4 38 0.0013 18.4 1.0 13 55-67 37-49 (50)
286 2ee8_A Protein ODD-skipped-rel 20.2 35 0.0012 19.1 0.9 14 54-67 16-29 (106)
287 1l8d_A DNA double-strand break 20.0 34 0.0011 20.6 0.9 12 55-66 47-58 (112)
No 1
>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.5e-33 Score=193.42 Aligned_cols=79 Identities=28% Similarity=0.607 Sum_probs=74.2
Q ss_pred CCccccHHHHHHHHHHhCCCCCCCCCCccCcc-----cccHH--HHHHhhhhceeeeeccceeEeCCCCccccccCCccc
Q psy15340 1 MIPKLDWSAFYKATLMLGDAEISIPEKLIDSY-----EKDSE--FLKKVHHALLEVEVVEGDLECPESGRKFPISSGIPN 73 (81)
Q Consensus 1 ml~kldw~al~~aa~~lg~~~~~lP~~~~~~~-----~~~e~--~l~~lh~~ll~~~v~eg~L~C~~c~~~ypI~dGIP~ 73 (81)
||||+||+||++||++||. .+||+++|+++ ++||+ |||++||+++++++.+|+|+|+.||++|||+|||||
T Consensus 50 mlpkldW~aL~~aA~~lg~--~~LP~~~pe~~~~~~~~~dee~~~Lk~lHh~lle~~v~eg~L~C~~cg~~YPI~dGIP~ 127 (141)
T 2j6a_A 50 IVDRVDWPAVLTVAAELGN--NALPPTKPSFPSSIQELTDDDMAILNDLHTLLLQTSIAEGEMKCRNCGHIYYIKNGIPN 127 (141)
T ss_dssp HHHHSCHHHHHHHHHHTTC--CCSCSSCCCCCSSGGGCCHHHHHHHHHHHHHHTTEEEEEEEEECTTTCCEEEEETTEES
T ss_pred HHhhcCHHHHHHHHHHhCC--ccCCCcCCcccccccccCchHHHHHHHHHHHHhheeccCCEEECCCCCCcccccCCccC
Confidence 6899999999999999999 66999999875 55776 999999999999999999999999999999999999
Q ss_pred cCCCCcCC
Q psy15340 74 MLLKEDEI 81 (81)
Q Consensus 74 ml~~e~ev 81 (81)
||+++++|
T Consensus 128 mL~~ear~ 135 (141)
T 2j6a_A 128 LLLPPHLV 135 (141)
T ss_dssp SCCCSSCC
T ss_pred cCCcHHHh
Confidence 99999986
No 2
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.97 E-value=1.2e-33 Score=190.69 Aligned_cols=75 Identities=21% Similarity=0.328 Sum_probs=72.1
Q ss_pred CCc---cccHHHHHHHHHHhCCCCCCCCCCccCcccccHHHHHHhhhhceeeeeccceeEeCCCCccccccCCccccCCC
Q psy15340 1 MIP---KLDWSAFYKATLMLGDAEISIPEKLIDSYEKDSEFLKKVHHALLEVEVVEGDLECPESGRKFPISSGIPNMLLK 77 (81)
Q Consensus 1 ml~---kldw~al~~aa~~lg~~~~~lP~~~~~~~~~~e~~l~~lh~~ll~~~v~eg~L~C~~c~~~ypI~dGIP~ml~~ 77 (81)
||| |+||+||++||++||. .+||+++|+++++|++|||++||+|++++|++|+|+||+|||.|||++|||||+..
T Consensus 44 mlp~~~kldW~aL~~aA~~lg~--~~LP~~~p~~~~~deefLr~lHh~Lle~~V~EG~L~Cp~cgr~ypI~~GIPNm~~~ 121 (125)
T 3q87_A 44 MFTENGGERLKSLVNSLRDFHG--RELSEQDISSFVENPGDDEKIKEFLFGIDVVEGSLRCDMCGLIYPIKGSIVETVDT 121 (125)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCS--SCCCHHHHHHHHHCTTCCHHHHHHHHSEEEEEEEEEETTTCCEEEEETTEEECSSC
T ss_pred HcCCccccCHHHHHHHHHHhCC--ccCCCCCCCcccCCHHHHHHHHHHHHheEEEEEEEECCCCCCEeeccCCcccHHHh
Confidence 678 9999999999999998 77999999999999999999999999999999999999999999999999999964
No 3
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=99.45 E-value=1.9e-14 Score=87.71 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=30.6
Q ss_pred eeeeeccceeEeCCCCccccccCCccccCCCCcC
Q psy15340 47 LEVEVVEGDLECPESGRKFPISSGIPNMLLKEDE 80 (81)
Q Consensus 47 l~~~v~eg~L~C~~c~~~ypI~dGIP~ml~~e~e 80 (81)
+.++..+|+|+|+.||++|||+||||+||+++++
T Consensus 20 L~~~~~~g~LvC~~c~~~YPI~dGIPvmL~~Ear 53 (67)
T 2jny_A 20 LRYLESEQLLVNERLNLAYRIDDGIPVLLIDEAT 53 (67)
T ss_dssp CEEETTTTEEEETTTTEEEEEETTEECCCSSCCE
T ss_pred CeEeCCCCEEEcCCCCccccCCCCEeeeChhHhc
Confidence 4556678999999999999999999999999875
No 4
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=99.43 E-value=3.2e-14 Score=86.83 Aligned_cols=34 Identities=32% Similarity=0.467 Sum_probs=30.6
Q ss_pred eeeeeccceeEeCCCCccccccCCccccCCCCcC
Q psy15340 47 LEVEVVEGDLECPESGRKFPISSGIPNMLLKEDE 80 (81)
Q Consensus 47 l~~~v~eg~L~C~~c~~~ypI~dGIP~ml~~e~e 80 (81)
+.++..+|+|+|+.||++|||+||||+||+++++
T Consensus 18 L~~~~~~~~LiC~~cg~~YPI~dGIPvmL~~Ear 51 (68)
T 2jr6_A 18 LEYHQDKQELWSRQAKLAYPIKDGIPYMLENEAR 51 (68)
T ss_dssp CEEETTTTEEEETTTTEEEEEETTEECCCTTTCE
T ss_pred CeEeCCCCEEEcCCCCcEecCCCCeeeeChhhcc
Confidence 4556678999999999999999999999999875
No 5
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=99.42 E-value=3e-14 Score=86.95 Aligned_cols=34 Identities=35% Similarity=0.579 Sum_probs=30.5
Q ss_pred eeeeeccceeEeCCCCccccccCCccccCCCCcC
Q psy15340 47 LEVEVVEGDLECPESGRKFPISSGIPNMLLKEDE 80 (81)
Q Consensus 47 l~~~v~eg~L~C~~c~~~ypI~dGIP~ml~~e~e 80 (81)
+.++..+|+|+|+.||++|||+||||+||+++++
T Consensus 18 L~~~~~~~~LiC~~cg~~YPI~dGIPvmL~~Ear 51 (68)
T 2hf1_A 18 LVFDKSKDELICKGDRLAFPIKDGIPMMLESEAR 51 (68)
T ss_dssp CEEETTTTEEEETTTTEEEEEETTEECCCGGGCE
T ss_pred CeEeCCCCEEEcCCCCcEecCCCCeeeeChhhcc
Confidence 4566678999999999999999999999999875
No 6
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=99.42 E-value=3.6e-14 Score=87.02 Aligned_cols=34 Identities=32% Similarity=0.621 Sum_probs=30.5
Q ss_pred eeeeeccceeEeCCCCccccccCCccccCCCCcC
Q psy15340 47 LEVEVVEGDLECPESGRKFPISSGIPNMLLKEDE 80 (81)
Q Consensus 47 l~~~v~eg~L~C~~c~~~ypI~dGIP~ml~~e~e 80 (81)
+.++..+|+|+|+.||++|||+||||+||+++++
T Consensus 18 L~~~~~~~~LiC~~cg~~YPI~dGIPvmL~~Ear 51 (70)
T 2js4_A 18 LEFQRAQAELVCNADRLAFPVRDGVPIMLEAEAR 51 (70)
T ss_dssp EEEETTTTEEEETTTTEEEEEETTEECCCGGGSE
T ss_pred CEEeCCCCEEEcCCCCceecCCCCeeeeChhhcc
Confidence 4566678999999999999999999999999875
No 7
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=99.40 E-value=5.3e-14 Score=86.05 Aligned_cols=34 Identities=32% Similarity=0.536 Sum_probs=30.1
Q ss_pred eeeeeccceeEeCCCCccccccCCccccCCCCcC
Q psy15340 47 LEVEVVEGDLECPESGRKFPISSGIPNMLLKEDE 80 (81)
Q Consensus 47 l~~~v~eg~L~C~~c~~~ypI~dGIP~ml~~e~e 80 (81)
+.++..+|+|+|+.||++|||+||||+||+++++
T Consensus 18 L~~~~~~~~LiC~~cg~~YPI~dGIPvmL~~ear 51 (69)
T 2pk7_A 18 LKLSADKTELISKGAGLAYPIRDGIPVMLESEAR 51 (69)
T ss_dssp CEECTTSSEEEETTTTEEEEEETTEECCCGGGCE
T ss_pred CeEeCCCCEEEcCCCCcEecCcCCeeeeChhhcc
Confidence 3455678999999999999999999999999875
No 8
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=99.31 E-value=2.4e-13 Score=88.04 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=28.6
Q ss_pred eeeccceeEeCCCCccccccCCccccCCCCcC
Q psy15340 49 VEVVEGDLECPESGRKFPISSGIPNMLLKEDE 80 (81)
Q Consensus 49 ~~v~eg~L~C~~c~~~ypI~dGIP~ml~~e~e 80 (81)
.++.+|+|+|+.||++|||+||||+||+++++
T Consensus 47 ~e~~~~~LvC~~c~~~YPI~dGIPvmL~~ear 78 (97)
T 2k5r_A 47 NQSLHEALITRDRKQVFRIEDSIPVLLPEEAI 78 (97)
T ss_dssp CCCCSEEEECTTSCEEEEEETTEEECCGGGEE
T ss_pred ccccCCeEEcCCCCCCccccCCCcccChHHhc
Confidence 34568999999999999999999999999864
No 9
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=99.26 E-value=1.9e-12 Score=76.22 Aligned_cols=28 Identities=32% Similarity=0.839 Sum_probs=26.5
Q ss_pred cceeEeC--CCCccccccCCccccCCCCcC
Q psy15340 53 EGDLECP--ESGRKFPISSGIPNMLLKEDE 80 (81)
Q Consensus 53 eg~L~C~--~c~~~ypI~dGIP~ml~~e~e 80 (81)
+|+|+|+ .||++|||+||||+||+++++
T Consensus 24 ~~~L~C~~~~c~~~YPI~dGIPvlL~~ear 53 (56)
T 2kpi_A 24 DAELICTGQDCGLAYPVRDGIPVLLVDEAR 53 (56)
T ss_dssp TTEEEECSSSCCCEEEEETTEECCCTTTCB
T ss_pred CCEEEcCCcCCCcEEeeECCEeeeCHHHcc
Confidence 4999999 999999999999999999986
No 10
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=95.67 E-value=0.0064 Score=33.58 Aligned_cols=21 Identities=19% Similarity=0.379 Sum_probs=18.1
Q ss_pred eeeeeccceeEeCCCCccccc
Q psy15340 47 LEVEVVEGDLECPESGRKFPI 67 (81)
Q Consensus 47 l~~~v~eg~L~C~~c~~~ypI 67 (81)
+.++...|+|+|+.||.+|+-
T Consensus 16 l~~d~~~gelvC~~CG~v~~e 36 (50)
T 1pft_A 16 LIYDPERGEIVCAKCGYVIEE 36 (50)
T ss_dssp EEEETTTTEEEESSSCCBCCC
T ss_pred eEEcCCCCeEECcccCCcccc
Confidence 566778899999999999984
No 11
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=91.38 E-value=0.041 Score=35.04 Aligned_cols=38 Identities=26% Similarity=0.420 Sum_probs=31.5
Q ss_pred hhhhceeeeeccceeEeCCCCccccccCCccccCCCCc
Q psy15340 42 VHHALLEVEVVEGDLECPESGRKFPISSGIPNMLLKED 79 (81)
Q Consensus 42 lh~~ll~~~v~eg~L~C~~c~~~ypI~dGIP~ml~~e~ 79 (81)
+=+..++++..+|...||+|+..|.=..|-|.+--+++
T Consensus 45 vCrpCyEYErkeG~q~CpqCktrYkr~kgsp~v~GDe~ 82 (93)
T 1weo_A 45 ACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDED 82 (93)
T ss_dssp CCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCC
T ss_pred hhHHHHHHHHhccCccccccCCccccccCCCCcccccc
Confidence 34677888999999999999999998889987766543
No 12
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=88.46 E-value=0.2 Score=28.67 Aligned_cols=20 Identities=35% Similarity=0.587 Sum_probs=16.3
Q ss_pred eeeeeccceeEeCCCCcccc
Q psy15340 47 LEVEVVEGDLECPESGRKFP 66 (81)
Q Consensus 47 l~~~v~eg~L~C~~c~~~yp 66 (81)
+..+...|+++|..||.++.
T Consensus 22 lv~D~~~ge~vC~~CGlVl~ 41 (58)
T 1dl6_A 22 LVEDYRAGDMICPECGLVVG 41 (58)
T ss_dssp CEECSSSCCEECTTTCCEEC
T ss_pred eeEeCCCCeEEeCCCCCEEe
Confidence 35567889999999999873
No 13
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=84.19 E-value=0.4 Score=28.67 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=23.4
Q ss_pred hhhceeeee--ccceeEeCCCCccccccCCccccC
Q psy15340 43 HHALLEVEV--VEGDLECPESGRKFPISSGIPNML 75 (81)
Q Consensus 43 h~~ll~~~v--~eg~L~C~~c~~~ypI~dGIP~ml 75 (81)
-|...=+++ .+|.-.||-||+.|..+++-..-|
T Consensus 26 gHPrVyl~ld~~~g~~~CpYCg~~f~l~~~~~~~~ 60 (67)
T 2jrr_A 26 GHPRVWLQIPEDTGWVECPYCDCKYVLKGSKADAL 60 (67)
T ss_dssp EEEEEEEECCTTTSEEEETTTTEEEEETTSGGGCC
T ss_pred CCCEEEEEccCCCCeEECCCCCCEEEECCCcchhh
Confidence 333333444 579999999999999888765443
No 14
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=81.69 E-value=0.69 Score=24.79 Aligned_cols=15 Identities=20% Similarity=0.587 Sum_probs=12.8
Q ss_pred ceeEeCCCCcccccc
Q psy15340 54 GDLECPESGRKFPIS 68 (81)
Q Consensus 54 g~L~C~~c~~~ypI~ 68 (81)
....|++||..+|+.
T Consensus 8 ~~~~C~~C~~~i~~~ 22 (39)
T 2i5o_A 8 DQVPCEKCGSLVPVW 22 (39)
T ss_dssp CEEECTTTCCEEEGG
T ss_pred CCcccccccCcCCcc
Confidence 457899999999985
No 15
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=80.53 E-value=1 Score=29.51 Aligned_cols=26 Identities=15% Similarity=0.270 Sum_probs=20.4
Q ss_pred hhceeeeeccceeEeCCCCccccccC
Q psy15340 44 HALLEVEVVEGDLECPESGRKFPISS 69 (81)
Q Consensus 44 ~~ll~~~v~eg~L~C~~c~~~ypI~d 69 (81)
.+-|+++...+...|..||..|.+.+
T Consensus 59 ~A~L~i~~~p~~~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 59 GAEIEFVEEEAVFKCRNCNYEWKLKE 84 (139)
T ss_dssp TCEEEEEEECCEEEETTTCCEEEGGG
T ss_pred CCEEEEEecCCcEECCCCCCEEeccc
Confidence 34455666777999999999999866
No 16
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=80.00 E-value=1.3 Score=27.98 Aligned_cols=46 Identities=22% Similarity=0.435 Sum_probs=31.2
Q ss_pred cccHHHHHHHHHHhCCCCCCCCCCccCcccc-cHHHHHHhhhhceeeeeccceeEeCCCCccccc
Q psy15340 4 KLDWSAFYKATLMLGDAEISIPEKLIDSYEK-DSEFLKKVHHALLEVEVVEGDLECPESGRKFPI 67 (81)
Q Consensus 4 kldw~al~~aa~~lg~~~~~lP~~~~~~~~~-~e~~l~~lh~~ll~~~v~eg~L~C~~c~~~ypI 67 (81)
.+||..|.+.. |+-..-++... -+.||+++-.. .+-||.||-.|-=
T Consensus 17 ~L~W~eLIeQM---------L~~en~~ei~kDr~~Fl~~~e~F---------~FkCP~CgEEFyG 63 (95)
T 2k5c_A 17 PLKWEELIEEM---------LIIENFEEIVKDRERFLAQVEEF---------VFKCPVCGEEFYG 63 (95)
T ss_dssp EECHHHHHHHS---------TTCSTHHHHTTCHHHHHHHHHHS---------EEECTTTCCEEET
T ss_pred ccCHHHHHHHH---------HhhccHHHHHhhHHHHHHHHHHH---------hhcCCCccHHHhc
Confidence 58999999843 23333334333 56799998766 4579999998853
No 17
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=79.07 E-value=1.3 Score=27.99 Aligned_cols=25 Identities=24% Similarity=0.472 Sum_probs=19.5
Q ss_pred hceeeeeccceeEeCCCCccccccC
Q psy15340 45 ALLEVEVVEGDLECPESGRKFPISS 69 (81)
Q Consensus 45 ~ll~~~v~eg~L~C~~c~~~ypI~d 69 (81)
+-|++....+...|..||+.|.+.+
T Consensus 63 a~L~i~~~p~~~~C~~CG~~~e~~~ 87 (119)
T 2kdx_A 63 AILDIVDEKVELECKDCSHVFKPNA 87 (119)
T ss_dssp CCEEEEEECCEEECSSSSCEECSCC
T ss_pred cEEEEEeccceEEcCCCCCEEeCCC
Confidence 3344566778999999999999854
No 18
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=77.73 E-value=0.95 Score=19.57 Aligned_cols=13 Identities=38% Similarity=0.925 Sum_probs=10.6
Q ss_pred eeEeCCCCccccc
Q psy15340 55 DLECPESGRKFPI 67 (81)
Q Consensus 55 ~L~C~~c~~~ypI 67 (81)
...|+.|++.|.-
T Consensus 2 ~~~C~~C~k~f~~ 14 (29)
T 2m0f_A 2 PLKCRECGKQFTT 14 (29)
T ss_dssp CEECTTTSCEESC
T ss_pred CccCCCCCCccCC
Confidence 4689999999864
No 19
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=77.27 E-value=0.91 Score=28.44 Aligned_cols=23 Identities=9% Similarity=0.232 Sum_probs=19.6
Q ss_pred ccceeEeCCCCccccccCCcccc
Q psy15340 52 VEGDLECPESGRKFPISSGIPNM 74 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~dGIP~m 74 (81)
.+|+-.||-||+.|..+++.+-.
T Consensus 45 ~~g~~~CpYCg~~y~~~~~~~~~ 67 (87)
T 2jz8_A 45 STDEKICPYCSTLYRYDPSLSYN 67 (87)
T ss_dssp TCCEECCTTTCCEEECCTTSCTT
T ss_pred CCCeEECCCCCCEeEcCCCCCcC
Confidence 46999999999999999887643
No 20
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=75.51 E-value=0.6 Score=28.84 Aligned_cols=31 Identities=19% Similarity=0.264 Sum_probs=22.6
Q ss_pred hhhhceeeee--ccceeEeCCCCccccccCCcc
Q psy15340 42 VHHALLEVEV--VEGDLECPESGRKFPISSGIP 72 (81)
Q Consensus 42 lh~~ll~~~v--~eg~L~C~~c~~~ypI~dGIP 72 (81)
+-|...=+++ .+|.-.||-||..|..+++..
T Consensus 38 LGHPrVyL~ld~~~g~~~CpYCg~~f~l~~~~~ 70 (80)
T 2jvm_A 38 LGHPRVWLSIPHETGFVECGYCDRRYIHESFAA 70 (80)
T ss_dssp CCCCCEEEECCTTTCEEECSSSSCEEEEHHHHS
T ss_pred CCCCEEEEEccCCCCeEECCCCCCEEEecCCcc
Confidence 3444444555 579999999999998876643
No 21
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.47 E-value=0.7 Score=26.17 Aligned_cols=16 Identities=25% Similarity=0.694 Sum_probs=13.8
Q ss_pred ceeEeCCCCccccccC
Q psy15340 54 GDLECPESGRKFPISS 69 (81)
Q Consensus 54 g~L~C~~c~~~ypI~d 69 (81)
+.-.||.|++.|...+
T Consensus 11 ~~~~CPrCn~~f~~~~ 26 (49)
T 2e72_A 11 GRKICPRCNAQFRVTE 26 (49)
T ss_dssp SCCCCTTTCCCCSSHH
T ss_pred CceeCCcccccccchH
Confidence 6889999999998754
No 22
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=74.42 E-value=1.4 Score=19.04 Aligned_cols=14 Identities=29% Similarity=0.586 Sum_probs=11.2
Q ss_pred eeEeCCCCcccccc
Q psy15340 55 DLECPESGRKFPIS 68 (81)
Q Consensus 55 ~L~C~~c~~~ypI~ 68 (81)
...|+.|++.|.-.
T Consensus 3 ~~~C~~C~~~f~~~ 16 (30)
T 2m0d_A 3 PYQCDYCGRSFSDP 16 (30)
T ss_dssp CEECTTTCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 46899999999743
No 23
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=73.03 E-value=1.6 Score=18.88 Aligned_cols=14 Identities=7% Similarity=0.074 Sum_probs=11.1
Q ss_pred eeEeCCCCcccccc
Q psy15340 55 DLECPESGRKFPIS 68 (81)
Q Consensus 55 ~L~C~~c~~~ypI~ 68 (81)
...|+.||+.|.-+
T Consensus 3 ~~~C~~C~k~f~~~ 16 (27)
T 2kvh_A 3 PFSCSLCPQRSRDF 16 (27)
T ss_dssp CEECSSSSCEESSH
T ss_pred CccCCCcChhhCCH
Confidence 46899999999643
No 24
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=70.19 E-value=1.8 Score=18.72 Aligned_cols=14 Identities=36% Similarity=0.797 Sum_probs=11.1
Q ss_pred eEeCCCCccccccC
Q psy15340 56 LECPESGRKFPISS 69 (81)
Q Consensus 56 L~C~~c~~~ypI~d 69 (81)
..|+.|++.|.-+.
T Consensus 3 ~~C~~C~k~f~~~~ 16 (29)
T 1rik_A 3 FACPECPKRFMRSD 16 (29)
T ss_dssp EECSSSSCEESCSH
T ss_pred ccCCCCCchhCCHH
Confidence 57999999997543
No 25
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=69.65 E-value=1.6 Score=18.60 Aligned_cols=13 Identities=23% Similarity=0.386 Sum_probs=10.3
Q ss_pred eEeCCCCcccccc
Q psy15340 56 LECPESGRKFPIS 68 (81)
Q Consensus 56 L~C~~c~~~ypI~ 68 (81)
..|+.|++.|.-+
T Consensus 2 ~~C~~C~k~f~~~ 14 (27)
T 1znf_A 2 YKCGLCERSFVEK 14 (27)
T ss_dssp CBCSSSCCBCSSH
T ss_pred ccCCCCCCcCCCH
Confidence 3699999999754
No 26
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=68.98 E-value=0.4 Score=27.24 Aligned_cols=28 Identities=18% Similarity=0.325 Sum_probs=19.2
Q ss_pred Hhhhhceeeeec-cceeEeCCCCcccccc
Q psy15340 41 KVHHALLEVEVV-EGDLECPESGRKFPIS 68 (81)
Q Consensus 41 ~lh~~ll~~~v~-eg~L~C~~c~~~ypI~ 68 (81)
.+|...+..=+. .+...||.|+..|+++
T Consensus 32 ~~H~~Cl~~W~~~~~~~~C~~C~~~~~~r 60 (60)
T 1vyx_A 32 NVHRSCLSTWLTISRNTACQICGVVYNTR 60 (60)
T ss_dssp SCCHHHHHHHHHHHTCSBCTTTCCBCCCC
T ss_pred hhHHHHHHHHHHhCCCCccCCCCCeeecC
Confidence 455554443333 4678999999999985
No 27
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=68.88 E-value=1.6 Score=18.86 Aligned_cols=13 Identities=23% Similarity=0.452 Sum_probs=10.4
Q ss_pred eEeCCCCcccccc
Q psy15340 56 LECPESGRKFPIS 68 (81)
Q Consensus 56 L~C~~c~~~ypI~ 68 (81)
..|+.|++.|.-.
T Consensus 3 ~~C~~C~~~f~~~ 15 (29)
T 1ard_A 3 FVCEVCTRAFARQ 15 (29)
T ss_dssp CBCTTTCCBCSSH
T ss_pred eECCCCCcccCCH
Confidence 5799999998643
No 28
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=68.86 E-value=1.6 Score=18.65 Aligned_cols=14 Identities=29% Similarity=0.679 Sum_probs=10.8
Q ss_pred eEeCCCCccccccC
Q psy15340 56 LECPESGRKFPISS 69 (81)
Q Consensus 56 L~C~~c~~~ypI~d 69 (81)
..|+.|++.|.-..
T Consensus 3 ~~C~~C~~~f~~~~ 16 (29)
T 2m0e_A 3 HKCPHCDKKFNQVG 16 (29)
T ss_dssp CCCSSCCCCCCTTT
T ss_pred CcCCCCCcccCCHH
Confidence 46999999997543
No 29
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=67.85 E-value=2.3 Score=18.31 Aligned_cols=14 Identities=21% Similarity=0.759 Sum_probs=11.1
Q ss_pred eeEeCCCCcccccc
Q psy15340 55 DLECPESGRKFPIS 68 (81)
Q Consensus 55 ~L~C~~c~~~ypI~ 68 (81)
...|+.|++.|.-+
T Consensus 3 ~~~C~~C~k~f~~~ 16 (28)
T 2kvf_A 3 PYSCSVCGKRFSLK 16 (28)
T ss_dssp SEECSSSCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 36799999999754
No 30
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=67.76 E-value=2 Score=18.68 Aligned_cols=14 Identities=21% Similarity=0.389 Sum_probs=11.1
Q ss_pred eeEeCCCCcccccc
Q psy15340 55 DLECPESGRKFPIS 68 (81)
Q Consensus 55 ~L~C~~c~~~ypI~ 68 (81)
...|+.||+.|.-+
T Consensus 3 ~~~C~~C~k~f~~~ 16 (27)
T 2kvg_A 3 PYRCPLCRAGCPSL 16 (27)
T ss_dssp TEEETTTTEEESCH
T ss_pred CcCCCCCCcccCCH
Confidence 36799999999754
No 31
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=70.35 E-value=1.2 Score=19.18 Aligned_cols=15 Identities=33% Similarity=0.629 Sum_probs=11.7
Q ss_pred eEeCCCCccccccCC
Q psy15340 56 LECPESGRKFPISSG 70 (81)
Q Consensus 56 L~C~~c~~~ypI~dG 70 (81)
..|+.||+.|.-+..
T Consensus 3 ~~C~~C~k~f~~~~~ 17 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQ 17 (26)
Confidence 469999999976544
No 32
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=66.25 E-value=2.1 Score=18.65 Aligned_cols=14 Identities=21% Similarity=0.403 Sum_probs=11.0
Q ss_pred eEeCCCCccccccC
Q psy15340 56 LECPESGRKFPISS 69 (81)
Q Consensus 56 L~C~~c~~~ypI~d 69 (81)
..|+.|++.|.-+.
T Consensus 3 ~~C~~C~k~f~~~~ 16 (30)
T 1paa_A 3 YACGLCNRAFTRRD 16 (30)
T ss_dssp SBCTTTCCBCSSSH
T ss_pred cCCcccCcccCChH
Confidence 46999999997544
No 33
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=65.75 E-value=2.5 Score=19.20 Aligned_cols=15 Identities=27% Similarity=0.330 Sum_probs=11.8
Q ss_pred ceeEeCCCCcccccc
Q psy15340 54 GDLECPESGRKFPIS 68 (81)
Q Consensus 54 g~L~C~~c~~~ypI~ 68 (81)
....|+.|++.|.-+
T Consensus 6 k~~~C~~C~k~f~~~ 20 (35)
T 2elx_A 6 SGYVCALCLKKFVSS 20 (35)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECCCCcchhCCH
Confidence 457899999999643
No 34
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=64.58 E-value=2.1 Score=18.41 Aligned_cols=13 Identities=15% Similarity=0.130 Sum_probs=10.3
Q ss_pred eEeCCCCcccccc
Q psy15340 56 LECPESGRKFPIS 68 (81)
Q Consensus 56 L~C~~c~~~ypI~ 68 (81)
..|+.|++.|.-.
T Consensus 3 ~~C~~C~k~f~~~ 15 (30)
T 1klr_A 3 YQCQYCEFRSADS 15 (30)
T ss_dssp CCCSSSSCCCSCS
T ss_pred ccCCCCCCccCCH
Confidence 4699999999644
No 35
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=64.31 E-value=3.4 Score=24.51 Aligned_cols=19 Identities=21% Similarity=0.263 Sum_probs=12.1
Q ss_pred ceeEeCCCCccccccCCcc
Q psy15340 54 GDLECPESGRKFPISSGIP 72 (81)
Q Consensus 54 g~L~C~~c~~~ypI~dGIP 72 (81)
-+-+|+.||+.|.+.++-+
T Consensus 27 v~Y~C~~CG~~~e~~~~d~ 45 (70)
T 1twf_L 27 LKYICAECSSKLSLSRTDA 45 (70)
T ss_dssp CCEECSSSCCEECCCTTST
T ss_pred EEEECCCCCCcceeCCCCC
Confidence 3457777777777765533
No 36
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=63.86 E-value=3.5 Score=25.08 Aligned_cols=23 Identities=13% Similarity=0.421 Sum_probs=16.7
Q ss_pred ceeeeecccee-EeCCCCcccccc
Q psy15340 46 LLEVEVVEGDL-ECPESGRKFPIS 68 (81)
Q Consensus 46 ll~~~v~eg~L-~C~~c~~~ypI~ 68 (81)
+.=+-+.+|.. +|++||..|...
T Consensus 46 v~W~~l~~g~~~RC~eCG~~fkL~ 69 (80)
T 2odx_A 46 IMWLKPTVNEVARCWECGSVYKLN 69 (80)
T ss_dssp CEEECCCTTCEEECSSSCCEEEEC
T ss_pred EEEEEecCCCCeECCCCCeEEEEE
Confidence 33445566665 999999999865
No 37
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.95 E-value=2.6 Score=19.52 Aligned_cols=16 Identities=19% Similarity=0.488 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (37)
T 2elo_A 7 GRSYSCPVCEKSFSED 22 (37)
T ss_dssp CCCCEETTTTEECSSH
T ss_pred CCCcCCCCCCCccCCH
Confidence 4457899999999754
No 38
>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2ybb_Q* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* ...
Probab=62.63 E-value=3.5 Score=25.96 Aligned_cols=23 Identities=17% Similarity=0.556 Sum_probs=16.1
Q ss_pred ceeeeecccee-EeCCCCcccccc
Q psy15340 46 LLEVEVVEGDL-ECPESGRKFPIS 68 (81)
Q Consensus 46 ll~~~v~eg~L-~C~~c~~~ypI~ 68 (81)
++=+-+.+|.. +|++||..|...
T Consensus 69 v~W~~l~~g~~~RC~eCG~~fkL~ 92 (98)
T 1v54_F 69 VIWFWLHKGEAQRCPSCGTHYKLV 92 (98)
T ss_dssp CEEEEEESSSCEECTTTCCEEEEE
T ss_pred eEEEEEeCCCceECCCCCeEEEEe
Confidence 33444556655 999999999754
No 39
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=66.37 E-value=1.6 Score=19.06 Aligned_cols=15 Identities=27% Similarity=0.574 Sum_probs=11.6
Q ss_pred eEeCCCCccccccCC
Q psy15340 56 LECPESGRKFPISSG 70 (81)
Q Consensus 56 L~C~~c~~~ypI~dG 70 (81)
..|+.|++.|.-...
T Consensus 3 ~~C~~C~k~f~~~~~ 17 (29)
T 2lvt_A 3 CQCVMCGKAFTQASS 17 (29)
Confidence 579999999976543
No 40
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=62.27 E-value=4.6 Score=28.58 Aligned_cols=19 Identities=26% Similarity=0.476 Sum_probs=15.2
Q ss_pred eeeeeccceeEeCCCCccc
Q psy15340 47 LEVEVVEGDLECPESGRKF 65 (81)
Q Consensus 47 l~~~v~eg~L~C~~c~~~y 65 (81)
+..|...|+++|.+||...
T Consensus 34 IV~D~erGE~VCsdCGLVL 52 (197)
T 3k1f_M 34 IVERFSEGDVVCALCGLVL 52 (197)
T ss_dssp EEEEGGGTEEEETTTCBBC
T ss_pred EEEeCCCCEEEEcCCCCCc
Confidence 3456679999999999874
No 41
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=61.93 E-value=2.8 Score=28.21 Aligned_cols=14 Identities=29% Similarity=0.641 Sum_probs=12.1
Q ss_pred cceeEeCCCCcccc
Q psy15340 53 EGDLECPESGRKFP 66 (81)
Q Consensus 53 eg~L~C~~c~~~yp 66 (81)
...++||+|++.|.
T Consensus 42 g~l~vCPeC~hEW~ 55 (138)
T 2akl_A 42 GALLVCPECAHEWS 55 (138)
T ss_dssp SSSEEETTTTEEEC
T ss_pred CCeEECCccccccC
Confidence 45799999999994
No 42
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=61.45 E-value=3.6 Score=18.70 Aligned_cols=16 Identities=13% Similarity=0.193 Sum_probs=12.3
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 5 ~k~~~C~~C~k~f~~~ 20 (35)
T 1srk_A 5 KRPFVCRICLSAFTTK 20 (35)
T ss_dssp CSCEECSSSCCEESSH
T ss_pred CcCeeCCCCCcccCCH
Confidence 3457899999999644
No 43
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.42 E-value=3.4 Score=19.43 Aligned_cols=16 Identities=6% Similarity=-0.085 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (37)
T 2elm_A 7 GHLYYCSQCHYSSITK 22 (37)
T ss_dssp SCEEECSSSSCEEECH
T ss_pred CcCeECCCCCcccCCH
Confidence 4458899999999643
No 44
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.91 E-value=3.6 Score=19.04 Aligned_cols=16 Identities=19% Similarity=0.347 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 7 GRAMKCPYCDFYFMKN 22 (37)
T ss_dssp CCCEECSSSSCEECSS
T ss_pred CCCeECCCCChhhccC
Confidence 3457999999999643
No 45
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.74 E-value=3.8 Score=18.80 Aligned_cols=15 Identities=13% Similarity=0.319 Sum_probs=11.9
Q ss_pred ceeEeCCCCcccccc
Q psy15340 54 GDLECPESGRKFPIS 68 (81)
Q Consensus 54 g~L~C~~c~~~ypI~ 68 (81)
....|+.|++.|.-.
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2els_A 8 KIFTCEYCNKVFKFK 22 (36)
T ss_dssp CCEECTTTCCEESSH
T ss_pred CCEECCCCCceeCCH
Confidence 457899999999643
No 46
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.22 E-value=3.7 Score=18.74 Aligned_cols=16 Identities=19% Similarity=0.403 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (36)
T 2elt_A 7 GKPYKCPQCSYASAIK 22 (36)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCCCCCCCCCcccCCH
Confidence 3457899999999754
No 47
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.07 E-value=3.1 Score=18.99 Aligned_cols=16 Identities=25% Similarity=0.407 Sum_probs=12.2
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 7 ~~~~~C~~C~k~f~~~ 22 (36)
T 2elr_A 7 GKTHLCDMCGKKFKSK 22 (36)
T ss_dssp CSSCBCTTTCCBCSSH
T ss_pred CCCeecCcCCCCcCch
Confidence 3457899999999643
No 48
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=64.42 E-value=1.9 Score=18.76 Aligned_cols=16 Identities=19% Similarity=0.351 Sum_probs=12.1
Q ss_pred eeEeCCCCccccccCC
Q psy15340 55 DLECPESGRKFPISSG 70 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dG 70 (81)
...|+.|++.|.-...
T Consensus 3 ~~~C~~C~k~f~~~~~ 18 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGA 18 (30)
Confidence 3679999999975543
No 49
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=60.01 E-value=3 Score=19.29 Aligned_cols=16 Identities=31% Similarity=0.692 Sum_probs=12.4
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (37)
T 1p7a_A 9 IKPFQCPDCDRSFSRS 24 (37)
T ss_dssp SSSBCCTTTCCCBSSH
T ss_pred CCCccCCCCCcccCcH
Confidence 3457899999999654
No 50
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.51 E-value=4.3 Score=18.60 Aligned_cols=16 Identities=25% Similarity=0.256 Sum_probs=12.4
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (36)
T 2elv_A 7 GLLYDCHICERKFKNE 22 (36)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCCCCCccCCH
Confidence 3457899999999754
No 51
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=58.29 E-value=2.8 Score=19.12 Aligned_cols=15 Identities=27% Similarity=0.676 Sum_probs=11.3
Q ss_pred eEeCCCCccccccCC
Q psy15340 56 LECPESGRKFPISSG 70 (81)
Q Consensus 56 L~C~~c~~~ypI~dG 70 (81)
..|+.|++.|.-+..
T Consensus 3 ~~C~~C~k~f~~~~~ 17 (32)
T 2kfq_A 3 FACPACPKRFMRSDA 17 (32)
T ss_dssp SSSSSSCTTHHHHHT
T ss_pred CCCCCCCcccCCHHH
Confidence 469999999975543
No 52
>4bbr_M Transcription initiation factor IIB; RNA polymerase, TFIIB; 3.40A {Saccharomyces cerevisiae} PDB: 3k7a_M 4bbs_M
Probab=58.16 E-value=5.4 Score=29.49 Aligned_cols=17 Identities=29% Similarity=0.515 Sum_probs=13.8
Q ss_pred eeeccceeEeCCCCccc
Q psy15340 49 VEVVEGDLECPESGRKF 65 (81)
Q Consensus 49 ~~v~eg~L~C~~c~~~y 65 (81)
.|..+|+++|..||...
T Consensus 36 ~D~~~G~~vC~~CGlVl 52 (345)
T 4bbr_M 36 ERFSEGDVVCALCGLVL 52 (345)
T ss_dssp EEGGGTEEEETTTCBEE
T ss_pred EECCCCcEEeCCCCCCc
Confidence 35578999999999763
No 53
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=57.68 E-value=4.3 Score=19.10 Aligned_cols=15 Identities=20% Similarity=0.395 Sum_probs=11.9
Q ss_pred ceeEeCCCCcccccc
Q psy15340 54 GDLECPESGRKFPIS 68 (81)
Q Consensus 54 g~L~C~~c~~~ypI~ 68 (81)
....|+.|++.|.-+
T Consensus 5 k~~~C~~C~k~f~~~ 19 (39)
T 1njq_A 5 RSYTCSFCKREFRSA 19 (39)
T ss_dssp SSEECTTTCCEESSH
T ss_pred CceECCCCCcccCCH
Confidence 457899999999643
No 54
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.29 E-value=4.4 Score=18.58 Aligned_cols=16 Identities=6% Similarity=0.044 Sum_probs=12.2
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-.
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (36)
T 2elq_A 7 GKPFKCSLCEYATRSK 22 (36)
T ss_dssp CCSEECSSSSCEESCH
T ss_pred CCCccCCCCCchhCCH
Confidence 3457899999998643
No 55
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=56.07 E-value=6.6 Score=20.50 Aligned_cols=13 Identities=15% Similarity=0.429 Sum_probs=6.8
Q ss_pred ceeEeCCCCcccc
Q psy15340 54 GDLECPESGRKFP 66 (81)
Q Consensus 54 g~L~C~~c~~~yp 66 (81)
....|+.|++.|.
T Consensus 9 k~~~C~~C~k~f~ 21 (66)
T 2drp_A 9 HTYRCKVCSRVYT 21 (66)
T ss_dssp TEEECTTTCCEES
T ss_pred cceECCCCcchhC
Confidence 3455555555554
No 56
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=55.21 E-value=3.9 Score=18.79 Aligned_cols=13 Identities=38% Similarity=0.846 Sum_probs=10.2
Q ss_pred eEeCCCCcccccc
Q psy15340 56 LECPESGRKFPIS 68 (81)
Q Consensus 56 L~C~~c~~~ypI~ 68 (81)
..|+.|++.|.-.
T Consensus 3 ~~C~~C~k~F~~~ 15 (33)
T 1rim_A 3 FACPECPKRFMRS 15 (33)
T ss_dssp CCCSSSCCCCSSH
T ss_pred ccCCCCCchhCCH
Confidence 4699999998643
No 57
>2y69_F Cytochrome C oxidase subunit 5B; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=54.81 E-value=4.8 Score=26.62 Aligned_cols=22 Identities=18% Similarity=0.554 Sum_probs=15.6
Q ss_pred eeeeecccee-EeCCCCcccccc
Q psy15340 47 LEVEVVEGDL-ECPESGRKFPIS 68 (81)
Q Consensus 47 l~~~v~eg~L-~C~~c~~~ypI~ 68 (81)
+=+-+.+|.. .||+||..|...
T Consensus 101 ~Wf~L~kg~p~RCpeCG~~fkL~ 123 (129)
T 2y69_F 101 IWFWLHKGEAQRCPSCGTHYKLV 123 (129)
T ss_dssp EEEEEESSSCEECTTTCCEEEEE
T ss_pred EEEEEeCCCceeCCCCCeEEEEe
Confidence 3344556654 999999999764
No 58
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=54.65 E-value=4.5 Score=20.93 Aligned_cols=13 Identities=31% Similarity=0.772 Sum_probs=10.1
Q ss_pred cceeEeCCCCcccc
Q psy15340 53 EGDLECPESGRKFP 66 (81)
Q Consensus 53 eg~L~C~~c~~~yp 66 (81)
+| ++||.|.+.+.
T Consensus 4 EG-FiCP~C~~~l~ 16 (34)
T 3mjh_B 4 EG-FICPQCMKSLG 16 (34)
T ss_dssp EE-EECTTTCCEES
T ss_pred cc-cCCcHHHHHcC
Confidence 45 89999987663
No 59
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.64 E-value=5.3 Score=19.39 Aligned_cols=17 Identities=35% Similarity=0.550 Sum_probs=13.0
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~F~~~ 25 (44)
T 2epv_A 9 GEKPYECNECGKAFIWK 25 (44)
T ss_dssp CCCSEECSSSCCEESSH
T ss_pred CCcCeECCCCCcccCch
Confidence 34568999999999643
No 60
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=54.48 E-value=8.2 Score=23.45 Aligned_cols=18 Identities=22% Similarity=0.230 Sum_probs=13.9
Q ss_pred eeeeccceeEeCCCCccc
Q psy15340 48 EVEVVEGDLECPESGRKF 65 (81)
Q Consensus 48 ~~~v~eg~L~C~~c~~~y 65 (81)
...+-.|.+.|+.|+..|
T Consensus 38 v~r~atGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 38 VDRQGTGIWQCSYCDYKF 55 (83)
T ss_dssp EEEEETTEEEETTTCCEE
T ss_pred eeccCCCeEECCCCCCEe
Confidence 345667889999999875
No 61
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.41 E-value=7.1 Score=21.74 Aligned_cols=25 Identities=20% Similarity=0.375 Sum_probs=19.8
Q ss_pred ceeEeCCCCccccccCCccccCCCC
Q psy15340 54 GDLECPESGRKFPISSGIPNMLLKE 78 (81)
Q Consensus 54 g~L~C~~c~~~ypI~dGIP~ml~~e 78 (81)
+...||.|+..+...+=.||....+
T Consensus 58 ~~~~CP~Cr~~~~~~~~~~n~~l~~ 82 (85)
T 2ecv_A 58 GESSCPVCRISYQPENIRPNRHVAN 82 (85)
T ss_dssp SCCCCTTTCCSSCSSSCCCSCCCCC
T ss_pred CCCcCCCCCCccCHHhcCccHHHHH
Confidence 5789999999999877777766543
No 62
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=54.38 E-value=4.6 Score=19.19 Aligned_cols=16 Identities=38% Similarity=0.733 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (42)
T 2el5_A 8 ENPYECSECGKAFNRK 23 (42)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCccCCCcChhhCCH
Confidence 4568999999999754
No 63
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.32 E-value=5.1 Score=19.30 Aligned_cols=17 Identities=18% Similarity=0.452 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (44)
T 2emb_A 9 TRKRYECSKCQATFNLR 25 (44)
T ss_dssp CCSSEECTTTCCEESCH
T ss_pred CCCCeECCCCCCccCCH
Confidence 34568999999999754
No 64
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.90 E-value=5.1 Score=19.30 Aligned_cols=18 Identities=22% Similarity=0.388 Sum_probs=13.7
Q ss_pred ccceeEeCCCCccccccC
Q psy15340 52 VEGDLECPESGRKFPISS 69 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~d 69 (81)
.+....|+.|++.|.-..
T Consensus 9 ~~~~~~C~~C~k~F~~~~ 26 (44)
T 2eox_A 9 DSKSYNCNECGKAFTRIF 26 (44)
T ss_dssp CCCCEEETTTTEEESSSH
T ss_pred CCCCeECcccCcccCCHH
Confidence 345689999999997543
No 65
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=53.45 E-value=5.6 Score=18.79 Aligned_cols=17 Identities=24% Similarity=0.429 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 8 ~~~~~~C~~C~k~f~~~ 24 (42)
T 2epc_A 8 GETPYLCGQCGKSFTQR 24 (42)
T ss_dssp SSCCEECSSSCCEESSH
T ss_pred CCCCeECCCCCcccCCH
Confidence 34568999999999643
No 66
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=53.18 E-value=5.2 Score=20.19 Aligned_cols=15 Identities=13% Similarity=0.443 Sum_probs=11.9
Q ss_pred ceeEeCCCCcccccc
Q psy15340 54 GDLECPESGRKFPIS 68 (81)
Q Consensus 54 g~L~C~~c~~~ypI~ 68 (81)
....|..|++.|.-+
T Consensus 6 kp~~C~~C~k~F~~~ 20 (48)
T 3iuf_A 6 KPYACDICGKRYKNR 20 (48)
T ss_dssp SCEECTTTCCEESSH
T ss_pred cCEECCCcCcccCCH
Confidence 457899999999643
No 67
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=53.14 E-value=5.3 Score=25.19 Aligned_cols=15 Identities=13% Similarity=0.470 Sum_probs=13.2
Q ss_pred eeEeCCCCccccccC
Q psy15340 55 DLECPESGRKFPISS 69 (81)
Q Consensus 55 ~L~C~~c~~~ypI~d 69 (81)
-|+|..||+.+.|.+
T Consensus 91 HliC~~Cg~v~~~~~ 105 (136)
T 1mzb_A 91 HMVCVDTGEVIEFMD 105 (136)
T ss_dssp EEEETTTCCEEEECC
T ss_pred EEEECCCCCEEEecc
Confidence 589999999999864
No 68
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.13 E-value=5.6 Score=19.29 Aligned_cols=17 Identities=29% Similarity=0.434 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2yts_A 9 GEKPYICNECGKSFIQK 25 (46)
T ss_dssp SCCSEECSSSCCEESSH
T ss_pred CCcCEECCCCChhhCCh
Confidence 34568999999999643
No 69
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=52.94 E-value=5.4 Score=24.78 Aligned_cols=18 Identities=28% Similarity=0.545 Sum_probs=15.2
Q ss_pred eeccceeEeCCCCccccc
Q psy15340 50 EVVEGDLECPESGRKFPI 67 (81)
Q Consensus 50 ~v~eg~L~C~~c~~~ypI 67 (81)
.|....++|-+||+.|..
T Consensus 16 si~~d~iiClecGK~fK~ 33 (87)
T 2jsp_A 16 SVQDDHIVCLECGGSFKS 33 (87)
T ss_dssp TBCSSCEECTBTCCEESB
T ss_pred ccCCCceEecccchhhHH
Confidence 457789999999999974
No 70
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.89 E-value=5.6 Score=19.33 Aligned_cols=17 Identities=35% Similarity=0.597 Sum_probs=13.0
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~~~~~C~~C~k~F~~~ 25 (46)
T 2emi_A 9 GERHYECSECGKAFIQK 25 (46)
T ss_dssp SCCCEECSSSCCEESSH
T ss_pred CCCCCCCCCCCcccCCH
Confidence 34568999999999643
No 71
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=52.39 E-value=7.3 Score=21.69 Aligned_cols=24 Identities=25% Similarity=0.549 Sum_probs=19.2
Q ss_pred ceeEeCCCCccccccCCccccCCC
Q psy15340 54 GDLECPESGRKFPISSGIPNMLLK 77 (81)
Q Consensus 54 g~L~C~~c~~~ypI~dGIP~ml~~ 77 (81)
+...||.|+..+...+=.||...+
T Consensus 58 ~~~~CP~Cr~~~~~~~~~~n~~l~ 81 (85)
T 2ecw_A 58 GKGNCPVCRVPYPFGNLKPNLHVA 81 (85)
T ss_dssp SCBCCTTTCCCCCTTCCEECSCCC
T ss_pred CCCCCCCCCCcCCHHhCCcCHHHH
Confidence 478999999999887777776554
No 72
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.31 E-value=6 Score=19.28 Aligned_cols=17 Identities=29% Similarity=0.544 Sum_probs=13.2
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2em4_A 9 GQRPYECIECGKAFKTK 25 (46)
T ss_dssp CSSSEECSSSCCEESSH
T ss_pred CCcCcCCCCCCCccCCH
Confidence 34568999999999754
No 73
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.76 E-value=5.6 Score=19.15 Aligned_cols=17 Identities=24% Similarity=0.481 Sum_probs=13.3
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (44)
T 2yu5_A 9 GENPFKCSKCDRVFTQR 25 (44)
T ss_dssp CCCSEECSSSSCEESSS
T ss_pred CCCCeECCCCCchhCCH
Confidence 34568999999999754
No 74
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=51.75 E-value=8.3 Score=20.47 Aligned_cols=21 Identities=10% Similarity=0.268 Sum_probs=16.0
Q ss_pred eeccceeEeCCCCccccccCC
Q psy15340 50 EVVEGDLECPESGRKFPISSG 70 (81)
Q Consensus 50 ~v~eg~L~C~~c~~~ypI~dG 70 (81)
+..+....|+.||+.|.-.+.
T Consensus 34 H~~~k~~~C~~C~k~f~~~~~ 54 (62)
T 1vd4_A 34 DPMTGTFRCTFCHTEVEEDES 54 (62)
T ss_dssp ETTTTEEBCSSSCCBCEECTT
T ss_pred cCCCCCEECCCCCCccccCcc
Confidence 445677999999999976653
No 75
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.74 E-value=6.4 Score=19.18 Aligned_cols=17 Identities=24% Similarity=0.456 Sum_probs=13.2
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2eoy_A 9 KEKCFKCNKCEKTFSCS 25 (46)
T ss_dssp CSCCEECSSSCCEESSS
T ss_pred CCCCEECcCCCCcCCCH
Confidence 34568999999999754
No 76
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.69 E-value=6.6 Score=18.55 Aligned_cols=16 Identities=31% Similarity=0.628 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-.
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (41)
T 2ept_A 8 QRVYECQECGKSFRQK 23 (41)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCCCCCCcCCH
Confidence 4467899999999643
No 77
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=51.66 E-value=6.3 Score=21.85 Aligned_cols=21 Identities=19% Similarity=0.370 Sum_probs=15.9
Q ss_pred eeeccceeEeCCCCccccccC
Q psy15340 49 VEVVEGDLECPESGRKFPISS 69 (81)
Q Consensus 49 ~~v~eg~L~C~~c~~~ypI~d 69 (81)
.+...+.++|+.||...+...
T Consensus 12 ~~~~~~~~~C~~CG~~i~~~~ 32 (49)
T 2l8e_A 12 LDKKANLLKCEYCGKYAPAEQ 32 (49)
T ss_dssp GGGGCSEEECTTTCCEEEGGG
T ss_pred ccccCCCCcChhccCcccccc
Confidence 344567788999999888753
No 78
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.14 E-value=5 Score=19.00 Aligned_cols=16 Identities=25% Similarity=0.611 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (42)
T 2ytb_A 9 EKPYRCDQCGKAFSQK 24 (42)
T ss_dssp CCSBCCTTTTCCBSSH
T ss_pred CCCeeCCCccchhCCH
Confidence 4567899999999754
No 79
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=50.94 E-value=6.1 Score=19.25 Aligned_cols=16 Identities=50% Similarity=0.956 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emj_A 10 EKPFECAECGKSFSIS 25 (46)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCCEECCCCCcccCCH
Confidence 4568999999999643
No 80
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.89 E-value=6.4 Score=18.92 Aligned_cols=16 Identities=19% Similarity=0.401 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (44)
T 2emx_A 8 EKPFGCSCCEKAFSSK 23 (44)
T ss_dssp CCCEECSSSSCEESSH
T ss_pred CcCccCCCCCcccCCH
Confidence 4568999999999754
No 81
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.60 E-value=6.5 Score=18.63 Aligned_cols=16 Identities=25% Similarity=0.522 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (42)
T 2en2_A 9 EKPYKCETCGARFVQV 24 (42)
T ss_dssp SCSEECTTTCCEESSH
T ss_pred CCCEeCCCcChhhCCH
Confidence 4568999999999643
No 82
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.52 E-value=6.6 Score=18.99 Aligned_cols=16 Identities=31% Similarity=0.652 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eow_A 10 EKPYKCNECGKAFRAR 25 (46)
T ss_dssp CCCEECTTSCCEESSH
T ss_pred CCCeeccccCChhcCH
Confidence 4568999999999754
No 83
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.45 E-value=6.9 Score=18.91 Aligned_cols=17 Identities=29% Similarity=0.528 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~~~~~C~~C~k~f~~~ 25 (46)
T 2yrj_A 9 GEKPYRCGECGKAFAQK 25 (46)
T ss_dssp CCCCEECSSSCCEESSH
T ss_pred CCCCeECCCCCCccCCH
Confidence 34568999999999743
No 84
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=50.14 E-value=5.6 Score=19.96 Aligned_cols=16 Identities=19% Similarity=0.382 Sum_probs=12.2
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+.-..|+.||++|.-+
T Consensus 6 ekp~~C~~CgK~F~~~ 21 (36)
T 1fv5_A 6 PARFMCLPCGIAFSSP 21 (36)
T ss_dssp CCCCEETTTTEECSCH
T ss_pred ccCeECCCCCCccCCH
Confidence 3457899999999643
No 85
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.88 E-value=4.9 Score=19.29 Aligned_cols=16 Identities=38% Similarity=0.661 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (44)
T 2eoj_A 10 ENPYECCECGKVFSRK 25 (44)
T ss_dssp CCSCEETTTTEECSSH
T ss_pred CcCeeCCCCCCccCCH
Confidence 4568999999998754
No 86
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.87 E-value=6.7 Score=19.03 Aligned_cols=17 Identities=24% Similarity=0.378 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~~~~~C~~C~k~F~~~ 25 (46)
T 2em3_A 9 GEKPYECKVCSKAFTQK 25 (46)
T ss_dssp SCCSEECSSSCCEESSH
T ss_pred CCcCeECCCCCcccCCH
Confidence 34568999999999743
No 87
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.56 E-value=7 Score=19.02 Aligned_cols=17 Identities=24% Similarity=0.456 Sum_probs=13.2
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2em8_A 9 GEKPYKCVECGKGYKRR 25 (46)
T ss_dssp SCCSEECSSSCCEESSH
T ss_pred CCCCeECcccCchhCCH
Confidence 34568999999999743
No 88
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.46 E-value=5 Score=19.01 Aligned_cols=16 Identities=25% Similarity=0.447 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (42)
T 2yte_A 8 EKPYSCAECKETFSDN 23 (42)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCeECCCCCCccCCH
Confidence 4457899999999743
No 89
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.31 E-value=6.7 Score=19.03 Aligned_cols=17 Identities=29% Similarity=0.518 Sum_probs=13.3
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2ene_A 9 GEKPYKCNECGKVFRHN 25 (46)
T ss_dssp CSSSEECSSSCCEESSH
T ss_pred CCCCeECCCCCchhCCh
Confidence 34568999999999754
No 90
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=49.22 E-value=6.9 Score=24.96 Aligned_cols=16 Identities=13% Similarity=0.260 Sum_probs=13.8
Q ss_pred eeEeCCCCccccccCC
Q psy15340 55 DLECPESGRKFPISSG 70 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dG 70 (81)
-|+|..||+.+.|.+.
T Consensus 93 HliC~~Cg~v~~~~~~ 108 (145)
T 2fe3_A 93 HAICENCGKIVDFHYP 108 (145)
T ss_dssp EEEETTTCCEEECCCC
T ss_pred eEEECCCCCEEEecCC
Confidence 5999999999999653
No 91
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=49.14 E-value=7.1 Score=19.90 Aligned_cols=16 Identities=25% Similarity=0.235 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-.
T Consensus 22 ~k~~~C~~C~k~f~~~ 37 (54)
T 1yui_A 22 EQPATCPICYAVIRQS 37 (54)
T ss_dssp SCCEECTTTCCEESSH
T ss_pred CCCccCCCCCcccCCH
Confidence 4568999999998643
No 92
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.11 E-value=5.8 Score=19.28 Aligned_cols=16 Identities=31% Similarity=0.642 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2emg_A 10 ENPFICSECGKVFTHK 25 (46)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCEECCccCcccCCH
Confidence 4467899999999643
No 93
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.00 E-value=6.1 Score=18.80 Aligned_cols=16 Identities=25% Similarity=0.430 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (42)
T 2eos_A 9 EKPYPCEICGTRFRHL 24 (42)
T ss_dssp SCCBCCSSSCCCBSSH
T ss_pred CCCEECCCCCCccCCH
Confidence 4467899999999754
No 94
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.96 E-value=7.3 Score=18.94 Aligned_cols=16 Identities=31% Similarity=0.590 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2eoo_A 10 ERPYGCNECGKNFGRH 25 (46)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCEEccccCcccCCH
Confidence 4568999999999754
No 95
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.93 E-value=7.1 Score=18.93 Aligned_cols=17 Identities=29% Similarity=0.513 Sum_probs=13.2
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2eml_A 9 GEKPYECSVCGKAFSHR 25 (46)
T ss_dssp SCCSEECSSSCCEESSH
T ss_pred CCCCeeCCCcCCccCCH
Confidence 34568999999999754
No 96
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=48.88 E-value=6.8 Score=24.94 Aligned_cols=15 Identities=20% Similarity=0.565 Sum_probs=13.2
Q ss_pred eeEeCCCCccccccC
Q psy15340 55 DLECPESGRKFPISS 69 (81)
Q Consensus 55 ~L~C~~c~~~ypI~d 69 (81)
-|+|..||+.+.|.+
T Consensus 87 HliC~~Cg~v~~~~~ 101 (139)
T 3mwm_A 87 HLVCRACGKAVEVEG 101 (139)
T ss_dssp EEEETTTCCEEEECC
T ss_pred EEEECCCCCEeeccc
Confidence 499999999999864
No 97
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.82 E-value=6.7 Score=18.70 Aligned_cols=17 Identities=29% Similarity=0.458 Sum_probs=13.2
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (44)
T 2eof_A 9 GEKPYECNECQKAFNTK 25 (44)
T ss_dssp CCCSEECTTTCCEESCH
T ss_pred CCCCeECCCCCcccCCH
Confidence 34568999999999754
No 98
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.77 E-value=5.8 Score=19.27 Aligned_cols=16 Identities=31% Similarity=0.646 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2enf_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCSCBCSSSCCBCSSH
T ss_pred CcCeECCCCCcccCCH
Confidence 4567999999999754
No 99
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.66 E-value=7.4 Score=18.92 Aligned_cols=16 Identities=31% Similarity=0.696 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2em5_A 10 TKSHQCHECGRGFTLK 25 (46)
T ss_dssp SCSEECSSSCCEESSH
T ss_pred CCCeECCcCCCccCCH
Confidence 4568999999999643
No 100
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.66 E-value=6.7 Score=19.03 Aligned_cols=17 Identities=18% Similarity=0.446 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2ysp_A 9 GEKPYKCEKCGKGYNSK 25 (46)
T ss_dssp SCCSEEETTTTEEESCH
T ss_pred CCCCeECCCCCCccCCH
Confidence 34568999999999654
No 101
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.60 E-value=5.8 Score=19.37 Aligned_cols=17 Identities=24% Similarity=0.382 Sum_probs=13.0
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~F~~~ 25 (46)
T 2en9_A 9 GKKLFKCNECKKTFTQS 25 (46)
T ss_dssp SSCCCBCTTTCCBCSSH
T ss_pred CCCCEECCccCcccCCH
Confidence 34568899999999743
No 102
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.51 E-value=7.7 Score=18.86 Aligned_cols=17 Identities=24% Similarity=0.552 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2yto_A 9 GEKPYKCSDCGKAFTRK 25 (46)
T ss_dssp SCCCEECSSSCCEESSH
T ss_pred CCCCEECcccCCccCCH
Confidence 34568999999999643
No 103
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.44 E-value=7.2 Score=18.98 Aligned_cols=16 Identities=38% Similarity=0.752 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2ytp_A 10 ERHYECSECGKAFARK 25 (46)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCcCCcccCCH
Confidence 4568999999999643
No 104
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=48.28 E-value=7.4 Score=18.80 Aligned_cols=17 Identities=29% Similarity=0.565 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2em9_A 9 GEKPYNCKECGKSFRWA 25 (46)
T ss_dssp CCCSEECSSSCCEESSH
T ss_pred CCcCeECCccccccCCh
Confidence 34568999999999753
No 105
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.28 E-value=7.8 Score=18.77 Aligned_cols=17 Identities=35% Similarity=0.622 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~F~~~ 25 (46)
T 2emy_A 9 GENPYECHECGKAFSRK 25 (46)
T ss_dssp SSCCEECSSSCCEESSH
T ss_pred CCcCcCCCCCCcccCcH
Confidence 34568999999999743
No 106
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.11 E-value=7.8 Score=18.78 Aligned_cols=16 Identities=31% Similarity=0.619 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ep3_A 10 EKPYRCAECGKAFTDR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECCCCCchhCCH
Confidence 4568999999999754
No 107
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.06 E-value=6.7 Score=19.09 Aligned_cols=16 Identities=31% Similarity=0.623 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eoz_A 10 EKPYSCNVCGKAFVLS 25 (46)
T ss_dssp CCSEEETTTTEEESSH
T ss_pred CCCeECcccChhhCCH
Confidence 4568999999999643
No 108
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.04 E-value=7.1 Score=18.93 Aligned_cols=17 Identities=29% Similarity=0.382 Sum_probs=13.2
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~~~~~C~~C~k~f~~~ 25 (46)
T 2yso_A 9 REKSHQCRECGEIFFQY 25 (46)
T ss_dssp CCCCEECTTTCCEESSH
T ss_pred CCCCEEccccChhhCCH
Confidence 34568999999999753
No 109
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.83 E-value=7.8 Score=18.70 Aligned_cols=17 Identities=29% Similarity=0.483 Sum_probs=13.2
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~F~~~ 25 (46)
T 2epw_A 9 GEKPCKCTECGKAFCWK 25 (46)
T ss_dssp CCCSEECSSSCCEESSS
T ss_pred CCCCeeCCCCCCccCCH
Confidence 34568999999999754
No 110
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.74 E-value=7.1 Score=18.94 Aligned_cols=16 Identities=31% Similarity=0.605 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em7_A 10 EKPYKCEECGKGFICR 25 (46)
T ss_dssp CCSEECSSSCCEESCH
T ss_pred CcCccCCCccchhCCH
Confidence 4568999999999754
No 111
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.67 E-value=5.9 Score=19.12 Aligned_cols=16 Identities=38% Similarity=0.623 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-.
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (44)
T 2eou_A 10 KTTSECQECGKIFRHS 25 (44)
T ss_dssp SCCCCCTTTCCCCSSH
T ss_pred CcCeECCCCCcccCCH
Confidence 4567899999999754
No 112
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.59 E-value=7.7 Score=18.87 Aligned_cols=17 Identities=29% Similarity=0.595 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2em2_A 9 GEKPFKCKECGKAFRQN 25 (46)
T ss_dssp CCCSEECSSSCCEESSH
T ss_pred CCCCEECCcCCchhCCH
Confidence 34568999999999643
No 113
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=47.48 E-value=8.4 Score=21.34 Aligned_cols=24 Identities=25% Similarity=0.443 Sum_probs=18.7
Q ss_pred ceeEeCCCCccccccCCccccCCC
Q psy15340 54 GDLECPESGRKFPISSGIPNMLLK 77 (81)
Q Consensus 54 g~L~C~~c~~~ypI~dGIP~ml~~ 77 (81)
+...||.|+..+...+=.||....
T Consensus 52 ~~~~CP~Cr~~~~~~~l~~n~~l~ 75 (79)
T 2egp_A 52 GKSSCPVCGISYSFEHLQANQHLA 75 (79)
T ss_dssp CCCCCSSSCCCCCSSGGGTCSSSC
T ss_pred CCCcCCCCCCcCCHhhCCcCHHHH
Confidence 478999999999887766666554
No 114
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.31 E-value=7.5 Score=18.85 Aligned_cols=17 Identities=29% Similarity=0.544 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~~~~~C~~C~k~f~~~ 25 (46)
T 2ytk_A 9 GEKPYKCNECGKVFTQN 25 (46)
T ss_dssp SSCSEECSSSCCEESSH
T ss_pred CCCCEeCCcCCCccCCH
Confidence 34568999999999743
No 115
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.30 E-value=5.6 Score=19.49 Aligned_cols=17 Identities=29% Similarity=0.579 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2eon_A 9 GEKPYKCQVCGKAFRVS 25 (46)
T ss_dssp SCCSCBCSSSCCBCSSH
T ss_pred CCcccCCCCCCcccCcH
Confidence 34567899999999754
No 116
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.23 E-value=7.5 Score=18.83 Aligned_cols=17 Identities=29% Similarity=0.530 Sum_probs=13.2
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~~~~~C~~C~k~f~~~ 25 (46)
T 2en6_A 9 GEKPYGCNECGKTFSQK 25 (46)
T ss_dssp SSCCEEETTTTEEESSH
T ss_pred CCcCeECCCCCcccCch
Confidence 34568999999999743
No 117
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.98 E-value=7.9 Score=22.80 Aligned_cols=19 Identities=11% Similarity=0.216 Sum_probs=16.0
Q ss_pred ceeEeCCCCccccccCCcc
Q psy15340 54 GDLECPESGRKFPISSGIP 72 (81)
Q Consensus 54 g~L~C~~c~~~ypI~dGIP 72 (81)
+...||.|+..|++...++
T Consensus 57 ~~~~CplCr~~~~~~~~~~ 75 (80)
T 2d8s_A 57 DTRCCELCKYEFIMETKLS 75 (80)
T ss_dssp CCSBCSSSCCBCCCCCCSC
T ss_pred CCCCCCCCCCeeecCcccC
Confidence 4689999999999987654
No 118
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=46.96 E-value=7 Score=25.04 Aligned_cols=15 Identities=13% Similarity=0.257 Sum_probs=13.3
Q ss_pred eeEeCCCCccccccC
Q psy15340 55 DLECPESGRKFPISS 69 (81)
Q Consensus 55 ~L~C~~c~~~ypI~d 69 (81)
-|+|..||+.+.|..
T Consensus 90 HliC~~Cg~v~~~~~ 104 (145)
T 3eyy_A 90 HLVCRDCTNVIEADL 104 (145)
T ss_dssp EEEESSSSCEEEECG
T ss_pred EEEECCCCCEEEecC
Confidence 599999999999864
No 119
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=46.92 E-value=5 Score=29.40 Aligned_cols=18 Identities=28% Similarity=0.451 Sum_probs=14.3
Q ss_pred eeeeccceeEeCCCCccc
Q psy15340 48 EVEVVEGDLECPESGRKF 65 (81)
Q Consensus 48 ~~~v~eg~L~C~~c~~~y 65 (81)
..|-..|+++|..||..-
T Consensus 35 v~D~~~G~~vC~~CG~Vl 52 (345)
T 3k7a_M 35 VERFSEGDVVCALCGLVL 52 (345)
T ss_dssp CCCSSSCSCCCSSSCCCC
T ss_pred EEECCCCCEecCCCCeEc
Confidence 345578999999999865
No 120
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.86 E-value=7.9 Score=18.74 Aligned_cols=18 Identities=22% Similarity=0.479 Sum_probs=13.7
Q ss_pred ccceeEeCCCCccccccC
Q psy15340 52 VEGDLECPESGRKFPISS 69 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~d 69 (81)
.+....|+.|++.|.-+.
T Consensus 9 ~~~~~~C~~C~k~f~~~~ 26 (46)
T 2ytg_A 9 GEKPFKCGECGKSYNQRV 26 (46)
T ss_dssp SCCSEECTTTCCEESSSH
T ss_pred CCCCeECCCCCcccCCHH
Confidence 345689999999997543
No 121
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.76 E-value=8.3 Score=18.59 Aligned_cols=16 Identities=31% Similarity=0.605 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eor_A 10 EKPYNCEECGKAFIHD 25 (46)
T ss_dssp CCSEECTTTCCEESSH
T ss_pred CcCccCCCCCCCcCCH
Confidence 4568999999999643
No 122
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=46.71 E-value=7.6 Score=25.00 Aligned_cols=16 Identities=13% Similarity=0.430 Sum_probs=13.8
Q ss_pred ceeEeCCCCccccccC
Q psy15340 54 GDLECPESGRKFPISS 69 (81)
Q Consensus 54 g~L~C~~c~~~ypI~d 69 (81)
.-|+|..||+.+.|.+
T Consensus 98 ~HliC~~Cg~v~~~~~ 113 (150)
T 2xig_A 98 DHIICLHCGKIIEFAD 113 (150)
T ss_dssp EEEEETTTCCEEEECC
T ss_pred eEEEECCCCCEEEecC
Confidence 3699999999999864
No 123
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.65 E-value=6.7 Score=19.09 Aligned_cols=16 Identities=25% Similarity=0.432 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2enh_A 10 EKPYECDVCRKAFSHH 25 (46)
T ss_dssp SSSCBCTTTCCBCSSS
T ss_pred CCCcCCCCcCchhCCH
Confidence 4568899999999754
No 124
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.47 E-value=7.8 Score=18.70 Aligned_cols=16 Identities=31% Similarity=0.623 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytf_A 10 EKPFECSECQKAFNTK 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCcCCCCCCcccCCH
Confidence 4568999999999644
No 125
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.38 E-value=6.7 Score=18.97 Aligned_cols=16 Identities=25% Similarity=0.677 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eov_A 10 EKPYKCSDCGKSFTWK 25 (46)
T ss_dssp CCSCBCSSSCCBCSSH
T ss_pred CCCccCCccChhhCCH
Confidence 4468899999999743
No 126
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.38 E-value=8.6 Score=18.60 Aligned_cols=16 Identities=38% Similarity=0.717 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytj_A 10 EKPYICAECGKAFTIR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCCCChhhCCH
Confidence 4568999999999754
No 127
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.23 E-value=6.2 Score=19.16 Aligned_cols=16 Identities=31% Similarity=0.652 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq1_A 10 EKPYKCNECGKAFRAH 25 (46)
T ss_dssp SCCCCCTTTTCCCSSH
T ss_pred CCCeECCcCChhhCCH
Confidence 4568899999999643
No 128
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.08 E-value=7.5 Score=18.92 Aligned_cols=17 Identities=29% Similarity=0.585 Sum_probs=13.0
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~F~~~ 25 (46)
T 2emf_A 9 GGKHFECTECGKAFTRK 25 (46)
T ss_dssp SSCCEECSSSCCEESCH
T ss_pred CCCCeECCCCCchhCCH
Confidence 34568999999999643
No 129
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=45.94 E-value=7.8 Score=18.78 Aligned_cols=16 Identities=31% Similarity=0.650 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ema_A 10 EKRYKCNECGKVFSRN 25 (46)
T ss_dssp SCCEECSSSCCEESSH
T ss_pred CcCcCCCCCcchhCCH
Confidence 4568999999999643
No 130
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.91 E-value=8.1 Score=18.70 Aligned_cols=16 Identities=25% Similarity=0.439 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emh_A 10 ERPYICTVCGKAFTDR 25 (46)
T ss_dssp CCSEECTTTCCEESSH
T ss_pred CCCcCCCCCCchhCCH
Confidence 4568999999999754
No 131
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.79 E-value=8.1 Score=18.70 Aligned_cols=16 Identities=38% Similarity=0.700 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2en3_A 10 EKPFQCKECGMNFSWS 25 (46)
T ss_dssp CCSEECSSSCCEESSS
T ss_pred CCCeeCcccChhhCCH
Confidence 4568999999999643
No 132
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=45.79 E-value=8 Score=25.38 Aligned_cols=15 Identities=13% Similarity=0.494 Sum_probs=13.2
Q ss_pred eeEeCCCCccccccC
Q psy15340 55 DLECPESGRKFPISS 69 (81)
Q Consensus 55 ~L~C~~c~~~ypI~d 69 (81)
-|+|..||+.+.+.+
T Consensus 107 HliC~~CG~v~e~~~ 121 (162)
T 4ets_A 107 HMICKNCGKIIEFEN 121 (162)
T ss_dssp EEEETTTCCEEEECC
T ss_pred EEEECCCCCEEEecc
Confidence 499999999999864
No 133
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=45.64 E-value=8.2 Score=18.62 Aligned_cols=16 Identities=13% Similarity=0.476 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2el4_A 10 VKPYGCSQCAKTFSLK 25 (46)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCceECCCCCchhCCH
Confidence 4568999999999754
No 134
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=45.44 E-value=9.5 Score=20.96 Aligned_cols=14 Identities=14% Similarity=0.204 Sum_probs=10.9
Q ss_pred ccceeEeCCCCccc
Q psy15340 52 VEGDLECPESGRKF 65 (81)
Q Consensus 52 ~eg~L~C~~c~~~y 65 (81)
..+.+.|+.||..|
T Consensus 34 ~~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 34 HGDRWACGKCGYTE 47 (50)
T ss_dssp CSSEEECSSSCCEE
T ss_pred CCCeEECCCCCCEE
Confidence 35788999998765
No 135
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.38 E-value=7 Score=19.02 Aligned_cols=17 Identities=24% Similarity=0.589 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~F~~~ 25 (46)
T 2elz_A 9 VEKPYKCEDCGKGYNRR 25 (46)
T ss_dssp CCSSCBCSSSCCBCSSH
T ss_pred CCCCeeCcccCchhCCH
Confidence 34568899999999754
No 136
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.33 E-value=9.1 Score=18.43 Aligned_cols=16 Identities=31% Similarity=0.571 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eme_A 10 EKPYVCDYCGKAFGLS 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECCCCChhhCCH
Confidence 4568999999999754
No 137
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.27 E-value=9.1 Score=18.51 Aligned_cols=16 Identities=31% Similarity=0.646 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2yu8_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CSSEECSSSCCEESSS
T ss_pred CCCeECCcCCchhCCH
Confidence 4568999999999754
No 138
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=45.25 E-value=8.3 Score=24.82 Aligned_cols=15 Identities=27% Similarity=0.534 Sum_probs=13.2
Q ss_pred eeEeCCCCccccccC
Q psy15340 55 DLECPESGRKFPISS 69 (81)
Q Consensus 55 ~L~C~~c~~~ypI~d 69 (81)
-|+|..||+.+.|.+
T Consensus 90 HliC~~Cg~v~~~~~ 104 (150)
T 2w57_A 90 HLVCLDCGEVIEFSD 104 (150)
T ss_dssp EEEETTTCCEEEECC
T ss_pred EEEECCCCCEEEecc
Confidence 599999999999864
No 139
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.08 E-value=7.3 Score=18.94 Aligned_cols=16 Identities=31% Similarity=0.578 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em6_A 10 EKCYKCDVCGKEFSQS 25 (46)
T ss_dssp CCCCBCSSSCCBCSSH
T ss_pred CCCeECCCCCcccCCH
Confidence 4568899999999643
No 140
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.00 E-value=8.2 Score=18.68 Aligned_cols=16 Identities=25% Similarity=0.544 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2emp_A 10 VKPYMCNECGKAFSVY 25 (46)
T ss_dssp CCSEECSSSCCEESCH
T ss_pred CcCeECCCCCchhCCH
Confidence 4568999999999754
No 141
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=44.98 E-value=4.2 Score=22.81 Aligned_cols=24 Identities=29% Similarity=0.526 Sum_probs=19.0
Q ss_pred cceeEeCCCCccccccCCccccCC
Q psy15340 53 EGDLECPESGRKFPISSGIPNMLL 76 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~dGIP~ml~ 76 (81)
.|...||.|+..+...+=+||...
T Consensus 41 ~~~~~CP~C~~~~~~~~l~~n~~l 64 (78)
T 1t1h_A 41 AGHKTCPKSQETLLHAGLTPNYVL 64 (78)
T ss_dssp TTCCBCTTTCCBCSSCCCEECTTT
T ss_pred HCcCCCCCCcCCCChhhCccCHHH
Confidence 357899999999988777777654
No 142
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.97 E-value=9.1 Score=18.43 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-.
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2en8_A 10 EKSHTCDECGKNFCYI 25 (46)
T ss_dssp CSSEECTTTCCEESSH
T ss_pred CCCeECCCcCcccCCH
Confidence 4568999999999643
No 143
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.66 E-value=8.4 Score=18.58 Aligned_cols=16 Identities=38% Similarity=0.617 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2emm_A 10 ERPHKCNECGKSFIQS 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeeCCCCChhhCCH
Confidence 4568999999999754
No 144
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.39 E-value=7.5 Score=18.80 Aligned_cols=16 Identities=31% Similarity=0.582 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (47)
T 2epx_A 10 KKPYECIECGKAFIQN 25 (47)
T ss_dssp CCSBCCSSSCCCBSSH
T ss_pred CCCEECCccCchhCCh
Confidence 4468899999999743
No 145
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.37 E-value=5.9 Score=18.92 Aligned_cols=16 Identities=25% Similarity=0.457 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (44)
T 2en7_A 10 MKPYVCNECGKAFRSK 25 (44)
T ss_dssp SSSSCCTTTCCCCSSH
T ss_pred CcCeECCCCCCccCCH
Confidence 4567899999999754
No 146
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=44.32 E-value=8.6 Score=20.79 Aligned_cols=23 Identities=26% Similarity=0.436 Sum_probs=17.5
Q ss_pred cceeEeCCCCccccccCCccccC
Q psy15340 53 EGDLECPESGRKFPISSGIPNML 75 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~dGIP~ml 75 (81)
++...||.|+..+.-++=.|++.
T Consensus 41 ~~~~~CP~Cr~~~~~~~~~~~~~ 63 (65)
T 1g25_A 41 RGAGNCPECGTPLRKSNFRVQLF 63 (65)
T ss_dssp TTSSSCTTTCCCCSSCCCEEECC
T ss_pred cCCCcCCCCCCccccccceeecc
Confidence 35678999999998776666654
No 147
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=44.24 E-value=7.5 Score=18.90 Aligned_cols=18 Identities=33% Similarity=0.562 Sum_probs=13.5
Q ss_pred ccceeEeCCCCccccccC
Q psy15340 52 VEGDLECPESGRKFPISS 69 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~d 69 (81)
.+....|+.|++.|.-+.
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ely_A 9 GEKPFKCVECGKGFSRRS 26 (46)
T ss_dssp CCCSBCCSSSCCCBSSTT
T ss_pred CCCCcccCccCcccCCHH
Confidence 345678999999997543
No 148
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.90 E-value=9.2 Score=18.45 Aligned_cols=16 Identities=25% Similarity=0.675 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (45)
T 2epu_A 10 QKPFECTHCGKSFRAK 25 (45)
T ss_dssp CCSEEETTTTEEESSH
T ss_pred CcCccCCCCCCccCCh
Confidence 4468899999999754
No 149
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.82 E-value=9.3 Score=18.47 Aligned_cols=16 Identities=31% Similarity=0.787 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2en1_A 10 EKPFKCEECGKRFTQN 25 (46)
T ss_dssp CCSEEETTTTEEESSH
T ss_pred CCCeeCCCCCcccCCH
Confidence 4568999999999754
No 150
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=43.60 E-value=9.2 Score=16.08 Aligned_cols=13 Identities=31% Similarity=0.590 Sum_probs=10.3
Q ss_pred eEeC--CCCcccccc
Q psy15340 56 LECP--ESGRKFPIS 68 (81)
Q Consensus 56 L~C~--~c~~~ypI~ 68 (81)
..|+ .|++.|.-.
T Consensus 3 ~~C~~~~C~k~f~~~ 17 (29)
T 2ab3_A 3 YVCHFENCGRSFNDR 17 (29)
T ss_dssp EEECSTTTCEEESSH
T ss_pred CCCcCCcCcCccCCH
Confidence 5799 999998643
No 151
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.57 E-value=8.7 Score=18.59 Aligned_cols=16 Identities=31% Similarity=0.609 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ep2_A 10 EKPYECSICGKSFTKK 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCcCCCCCCcccCCH
Confidence 4568999999999743
No 152
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=43.28 E-value=9.5 Score=22.85 Aligned_cols=19 Identities=26% Similarity=0.700 Sum_probs=15.6
Q ss_pred cceeEeCCCCccccccCCc
Q psy15340 53 EGDLECPESGRKFPISSGI 71 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~dGI 71 (81)
.+...||.|+..|..+.|-
T Consensus 80 ~~~~~CP~CR~~~~~~~g~ 98 (114)
T 1v87_A 80 DGSLQCPSCKTIYGEKTGT 98 (114)
T ss_dssp SSCCBCTTTCCBSSSCSSS
T ss_pred CCCCcCCCCCCccCCCCCC
Confidence 4578999999999887663
No 153
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.03 E-value=7 Score=19.03 Aligned_cols=16 Identities=25% Similarity=0.420 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eoh_A 10 KKPYECKECRKTFIQI 25 (46)
T ss_dssp SCSCCCSSSCCCCSSH
T ss_pred CCCcCCCCcCchhCCH
Confidence 4467899999999743
No 154
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.98 E-value=7.8 Score=18.83 Aligned_cols=16 Identities=31% Similarity=0.798 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2yth_A 10 EKPFQCEECGKRFTQN 25 (46)
T ss_dssp SSSBCCSSSCCCBSSH
T ss_pred CcCCCCCCCCcccCCH
Confidence 4568899999999643
No 155
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.94 E-value=7.7 Score=18.73 Aligned_cols=16 Identities=31% Similarity=0.771 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq3_A 10 EKPYECNQCGKAFSVR 25 (46)
T ss_dssp CCSSEETTTTEECSSH
T ss_pred CCCeECCCCChhhCCH
Confidence 4568899999999643
No 156
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.86 E-value=8 Score=18.72 Aligned_cols=16 Identities=31% Similarity=0.646 Sum_probs=12.4
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2yti_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCTTCCSSSCCCCSSH
T ss_pred CcCeECCCCCcccCCh
Confidence 4457899999999754
No 157
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.82 E-value=11 Score=18.25 Aligned_cols=17 Identities=29% Similarity=0.565 Sum_probs=13.1
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2enc_A 9 GEKPFKCEECGKGFYTN 25 (46)
T ss_dssp CCCSEECSSSCCEESSH
T ss_pred CCCCcCCCCCCCcCCCh
Confidence 34568999999999744
No 158
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.74 E-value=6.8 Score=18.94 Aligned_cols=16 Identities=31% Similarity=0.665 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ep1_A 10 EKPYECSDCGKSFIKK 25 (46)
T ss_dssp CCSSCCSSSCCCCSSH
T ss_pred CCCcCCCCCCchhCCH
Confidence 4568899999999643
No 159
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=42.72 E-value=13 Score=22.10 Aligned_cols=25 Identities=20% Similarity=0.186 Sum_probs=20.3
Q ss_pred eeccceeEeCCCCccccccCCcccc
Q psy15340 50 EVVEGDLECPESGRKFPISSGIPNM 74 (81)
Q Consensus 50 ~v~eg~L~C~~c~~~ypI~dGIP~m 74 (81)
.+.++.++||--|-.|.+++|-..=
T Consensus 53 ~~~~~~i~Cp~Hg~~Fdl~~G~~~~ 77 (106)
T 3dqy_A 53 YLDGDIVECTLHFGKFCVRTGKVKA 77 (106)
T ss_dssp EEETTEEECTTTCCEEETTTCCEEE
T ss_pred EEeCCEEECCCCCCEEeCCCCCEeC
Confidence 3457899999999999999996543
No 160
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=42.66 E-value=10 Score=18.36 Aligned_cols=16 Identities=13% Similarity=0.370 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2el6_A 10 VNPYKCSQCEKSFSGK 25 (46)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCCeECCCCCcccCCH
Confidence 4568999999999754
No 161
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.55 E-value=7.7 Score=18.80 Aligned_cols=16 Identities=25% Similarity=0.636 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2epz_A 10 EKPFDCIDCGKAFSDH 25 (46)
T ss_dssp CCSBCCTTTCCCBSSH
T ss_pred CCCeECCCCCceeCCH
Confidence 4568899999999754
No 162
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.51 E-value=8.3 Score=18.66 Aligned_cols=16 Identities=25% Similarity=0.596 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2ytn_A 10 KKPYKCNECGKVFTQN 25 (46)
T ss_dssp CSSCBCTTTCCBCSSH
T ss_pred CcCeECCCCCCeeCCH
Confidence 4568899999999754
No 163
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.50 E-value=6.8 Score=19.07 Aligned_cols=16 Identities=31% Similarity=0.634 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2emz_A 10 ERPFKCNECGKGFGRR 25 (46)
T ss_dssp CCSCCCSSSCCCCSSH
T ss_pred CCCeECCCCCcccCCH
Confidence 4467899999999754
No 164
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.39 E-value=11 Score=18.17 Aligned_cols=16 Identities=31% Similarity=0.611 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2eq0_A 10 EKPYKCHECGKVFRRN 25 (46)
T ss_dssp CCCEECTTTCCEESSH
T ss_pred CCCeECCCCCchhCCH
Confidence 4568999999999754
No 165
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=42.11 E-value=8.3 Score=20.34 Aligned_cols=20 Identities=20% Similarity=0.282 Sum_probs=15.8
Q ss_pred eeEeCCCCccccccCCcccc
Q psy15340 55 DLECPESGRKFPISSGIPNM 74 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dGIP~m 74 (81)
...||.|+..+..++=+|+.
T Consensus 44 ~~~CP~Cr~~~~~~~~~~~~ 63 (64)
T 2xeu_A 44 ANTCPTCRKKINHKRYHPIY 63 (64)
T ss_dssp CSBCTTTCCBCTTTCEEECC
T ss_pred CCCCCCCCccCCccceeeee
Confidence 45899999999887766654
No 166
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=42.04 E-value=8.6 Score=18.68 Aligned_cols=16 Identities=38% Similarity=0.748 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emk_A 10 EKPYECKECGKAFSQT 25 (46)
T ss_dssp SCSCBCSSSCCBCSCH
T ss_pred CCceECCCCCchhCCH
Confidence 4468899999999743
No 167
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.93 E-value=8.4 Score=18.65 Aligned_cols=16 Identities=25% Similarity=0.611 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq2_A 10 GKPYQCNECGKAFSQT 25 (46)
T ss_dssp SCSSSCCSSCCCCSSH
T ss_pred CCCeECCCCCcccCCH
Confidence 4457899999999744
No 168
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.69 E-value=8.7 Score=18.52 Aligned_cols=16 Identities=38% Similarity=0.760 Sum_probs=12.6
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eop_A 10 EKPHECRECGKSFSFN 25 (46)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCeeCCCCCchhCCH
Confidence 4468899999999643
No 169
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.35 E-value=11 Score=18.11 Aligned_cols=16 Identities=19% Similarity=0.401 Sum_probs=12.7
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2ep0_A 10 EKPYKCDVCHKSFRYG 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeeCcccCcccCCh
Confidence 4568999999999754
No 170
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=41.33 E-value=10 Score=20.64 Aligned_cols=18 Identities=11% Similarity=0.194 Sum_probs=14.7
Q ss_pred eeEeCCCCccccccCCcc
Q psy15340 55 DLECPESGRKFPISSGIP 72 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dGIP 72 (81)
.-+|+.||..|.-..|-|
T Consensus 4 ~y~C~vCGyvyd~~~Gd~ 21 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDN 21 (46)
T ss_dssp CEEETTTCCEECGGGGTT
T ss_pred EEECCCCCeEEeCCcCCC
Confidence 468999999998777754
No 171
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.15 E-value=8.1 Score=18.64 Aligned_cols=16 Identities=31% Similarity=0.646 Sum_probs=12.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~~~~~C~~C~k~F~~~ 25 (46)
T 2eoe_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCSSEETTTTEECSSH
T ss_pred CCCeECCCcChhhCCH
Confidence 4568999999999754
No 172
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.11 E-value=11 Score=18.19 Aligned_cols=16 Identities=31% Similarity=0.642 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytd_A 10 EKPYKCSECGKAFHRH 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCCCCCeeCCh
Confidence 4568999999998643
No 173
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=41.00 E-value=14 Score=19.98 Aligned_cols=21 Identities=19% Similarity=0.313 Sum_probs=16.3
Q ss_pred eeEeCCCCccccccCCccccC
Q psy15340 55 DLECPESGRKFPISSGIPNML 75 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dGIP~ml 75 (81)
...||.|+..+.-++=.|+.+
T Consensus 51 ~~~CP~Cr~~~~~~~~~~~~l 71 (71)
T 3ng2_A 51 ANTCPTCRKKINHKRYHPIYI 71 (71)
T ss_dssp CSBCTTTCCBCCCCSCCCCCC
T ss_pred CCCCCCCCCccChhheeeccC
Confidence 358999999998877776653
No 174
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=40.95 E-value=9.2 Score=22.46 Aligned_cols=17 Identities=24% Similarity=0.399 Sum_probs=12.7
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
....-+|+.|++.|.-+
T Consensus 25 ~~~~h~C~~Cgk~F~~~ 41 (85)
T 2lv2_A 25 SAECHLCPVCGESFASK 41 (85)
T ss_dssp CCTTEECTTSCCEESSH
T ss_pred CCCCEECCCCCCCcCcH
Confidence 33456899999999754
No 175
>2wx3_A MRNA-decapping enzyme 1A; structural protein, trimerization module, P-BODY component, asymmetric assembly; 2.31A {Homo sapiens}
Probab=40.23 E-value=11 Score=21.36 Aligned_cols=16 Identities=38% Similarity=0.665 Sum_probs=12.7
Q ss_pred ccccHHHHHHhhhhce
Q psy15340 32 YEKDSEFLKKVHHALL 47 (81)
Q Consensus 32 ~~~~e~~l~~lh~~ll 47 (81)
..+|++|++.+|.+-+
T Consensus 24 IqnD~~Fl~~IHeAYl 39 (51)
T 2wx3_A 24 IKNDSSFLSTLHEVYL 39 (51)
T ss_dssp HHHCHHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHH
Confidence 3568999999998744
No 176
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.07 E-value=8.6 Score=18.54 Aligned_cols=16 Identities=31% Similarity=0.615 Sum_probs=12.4
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq4_A 10 EKLYNCKECGKSFSRA 25 (46)
T ss_dssp CCCCCBTTTTBCCSCH
T ss_pred CCCeECCCCCCccCch
Confidence 4457899999999743
No 177
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.70 E-value=10 Score=18.25 Aligned_cols=16 Identities=25% Similarity=0.524 Sum_probs=12.4
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (43)
T 2yrm_A 8 NGAFFCNECDCRFSEE 23 (43)
T ss_dssp SCCBCCSSSCCCBSSH
T ss_pred CCCEECCCCCCeeCCh
Confidence 3457899999999643
No 178
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=39.44 E-value=9 Score=18.53 Aligned_cols=16 Identities=25% Similarity=0.408 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2em0_A 10 EKTWKCRECDMCFSQA 25 (46)
T ss_dssp CCCCCCSSSCCCCSSH
T ss_pred CcCeECCCCCcccCCH
Confidence 4467899999999643
No 179
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.17 E-value=8.6 Score=18.61 Aligned_cols=16 Identities=25% Similarity=0.455 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eoq_A 10 EKPFKCDICGKSFCGR 25 (46)
T ss_dssp SCSCCCSSSCCCCSSH
T ss_pred CCCcCCCcCCchhCCH
Confidence 4468899999999643
No 180
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.81 E-value=9.6 Score=18.55 Aligned_cols=16 Identities=25% Similarity=0.538 Sum_probs=12.4
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2eom_A 10 ERGHRCSDCGKFFLQA 25 (46)
T ss_dssp CSSCCCSSSCCCCSSH
T ss_pred CCCcCCCCCCCeeCCh
Confidence 4457899999999743
No 181
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=38.43 E-value=12 Score=24.36 Aligned_cols=14 Identities=36% Similarity=0.600 Sum_probs=12.2
Q ss_pred eeEeCCCCcccccc
Q psy15340 55 DLECPESGRKFPIS 68 (81)
Q Consensus 55 ~L~C~~c~~~ypI~ 68 (81)
...|..||+.|+..
T Consensus 132 ~y~C~~Cg~~~~~~ 145 (165)
T 2lcq_A 132 RYVCIGCGRKFSTL 145 (165)
T ss_dssp CEEESSSCCEESSC
T ss_pred EEECCCCCCcccCC
Confidence 68999999999853
No 182
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=38.42 E-value=13 Score=18.33 Aligned_cols=16 Identities=19% Similarity=0.395 Sum_probs=12.3
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (48)
T 2epr_A 10 RKQVACEICGKIFRDV 25 (48)
T ss_dssp CCSEEETTTTEEESSH
T ss_pred CcCeeCCCCCcccCCH
Confidence 4468899999998643
No 183
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=38.28 E-value=11 Score=16.47 Aligned_cols=13 Identities=31% Similarity=0.715 Sum_probs=9.9
Q ss_pred eEeC--CCCcccccc
Q psy15340 56 LECP--ESGRKFPIS 68 (81)
Q Consensus 56 L~C~--~c~~~ypI~ 68 (81)
..|+ .||+.|.-+
T Consensus 3 ~~C~~~~C~k~f~~~ 17 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRS 17 (31)
T ss_dssp CBCCSTTCCCBCSSH
T ss_pred cCCcCCCCCcccCCH
Confidence 4687 999999754
No 184
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=38.26 E-value=13 Score=26.02 Aligned_cols=17 Identities=41% Similarity=1.109 Sum_probs=13.7
Q ss_pred eeEeCCCCccccccCCcc
Q psy15340 55 DLECPESGRKFPISSGIP 72 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dGIP 72 (81)
.|.||.|+..|+-. ||-
T Consensus 22 ~l~Cp~C~~~~~F~-gv~ 38 (206)
T 3flo_B 22 ELSCPSCDKRFPFG-GIV 38 (206)
T ss_dssp EEECTTTCCEEEEC-SSS
T ss_pred EEECCCCCCccCCC-Ccc
Confidence 78999999999865 553
No 185
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.25 E-value=7.4 Score=18.80 Aligned_cols=16 Identities=31% Similarity=0.692 Sum_probs=12.4
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytr_A 10 EKPYKCNECGKAFSQT 25 (46)
T ss_dssp CCTTCCTTTCCCCSSH
T ss_pred CcCcCCCCCCCccCCH
Confidence 4457899999999754
No 186
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.19 E-value=9.6 Score=18.48 Aligned_cols=16 Identities=31% Similarity=0.650 Sum_probs=12.5
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytq_A 10 EKPYGCSECGKAFSSK 25 (46)
T ss_dssp CCSCBCSSSCCBCSCH
T ss_pred CCCcCCCccChhhCCh
Confidence 4457899999999754
No 187
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=38.13 E-value=13 Score=19.68 Aligned_cols=17 Identities=24% Similarity=0.344 Sum_probs=13.2
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 46 ~~~~~~C~~C~~~f~~~ 62 (73)
T 1f2i_G 46 GQKPFQCRICMRNFSRS 62 (73)
T ss_dssp CCCCEECTTTCCEESCH
T ss_pred CCCCeECCCCCchhCCH
Confidence 34568999999999754
No 188
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=38.07 E-value=13 Score=22.79 Aligned_cols=16 Identities=19% Similarity=0.368 Sum_probs=13.9
Q ss_pred ccceeEeCCCCccccc
Q psy15340 52 VEGDLECPESGRKFPI 67 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI 67 (81)
.-|.+.|..||..|..
T Consensus 44 ~~g~l~C~~Cg~~~~~ 59 (85)
T 1wii_A 44 NTGVISCTVCLEEFQT 59 (85)
T ss_dssp TEEEEEESSSCCEEEE
T ss_pred CEEEEEcccCCCeEEe
Confidence 3589999999999976
No 189
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=37.64 E-value=13 Score=23.16 Aligned_cols=16 Identities=19% Similarity=0.480 Sum_probs=13.6
Q ss_pred ceeEeCCCCccccccC
Q psy15340 54 GDLECPESGRKFPISS 69 (81)
Q Consensus 54 g~L~C~~c~~~ypI~d 69 (81)
.-|+|..||+.+.+.+
T Consensus 82 ~HliC~~Cg~v~~~~~ 97 (131)
T 2o03_A 82 HHLVCRSCGSTIEVGD 97 (131)
T ss_dssp EEEEETTTCCEEEECC
T ss_pred CEEEeCCCCCEEEECC
Confidence 4699999999999864
No 190
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=37.64 E-value=14 Score=18.47 Aligned_cols=17 Identities=12% Similarity=0.098 Sum_probs=13.2
Q ss_pred cceeEeCCCCccccccC
Q psy15340 53 EGDLECPESGRKFPISS 69 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~d 69 (81)
+....|+.|++.|.-..
T Consensus 30 ~~~~~C~~C~~~f~~~~ 46 (57)
T 3uk3_C 30 EKPYKCEFCEYAAAQKT 46 (57)
T ss_dssp CCCEECSSSSCEESSHH
T ss_pred CCCcCCCCCcchhCCHH
Confidence 45689999999997543
No 191
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=37.49 E-value=8 Score=21.47 Aligned_cols=16 Identities=44% Similarity=0.758 Sum_probs=12.5
Q ss_pred cccHHHHHHhhhhcee
Q psy15340 33 EKDSEFLKKVHHALLE 48 (81)
Q Consensus 33 ~~~e~~l~~lh~~ll~ 48 (81)
.+|++|++.+|.+-+.
T Consensus 23 knD~~Fl~~iHeAYl~ 38 (46)
T 2wx4_A 23 QNDKEFANKLHKAYLN 38 (46)
T ss_dssp HHCTTHHHHHHHHHHC
T ss_pred HcCHHHHHHHHHHHHH
Confidence 4578899999998543
No 192
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=37.10 E-value=21 Score=19.94 Aligned_cols=18 Identities=22% Similarity=0.527 Sum_probs=13.5
Q ss_pred eeEeCCCCccccccCCcc
Q psy15340 55 DLECPESGRKFPISSGIP 72 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dGIP 72 (81)
.-+|+.||..|.=..|-|
T Consensus 3 ~y~C~~CGyvYd~~~Gdp 20 (55)
T 2v3b_B 3 KWQCVVCGFIYDEALGLP 20 (55)
T ss_dssp EEEETTTCCEEETTTCBT
T ss_pred cEEeCCCCeEECCCcCCc
Confidence 468999999997665544
No 193
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=37.06 E-value=18 Score=21.29 Aligned_cols=24 Identities=21% Similarity=0.475 Sum_probs=19.7
Q ss_pred eeccceeEeCCCCccccccCCccc
Q psy15340 50 EVVEGDLECPESGRKFPISSGIPN 73 (81)
Q Consensus 50 ~v~eg~L~C~~c~~~ypI~dGIP~ 73 (81)
.+.++.++||--|-.|.+++|-..
T Consensus 55 ~~~~~~i~Cp~Hg~~Fd~~~G~~~ 78 (103)
T 2qpz_A 55 YLEGREIECPLHQGRFDVCTGKAL 78 (103)
T ss_dssp EEETTEEECTTTTCEEETTTCCEE
T ss_pred eEeCCEEECCCCCCEEeCCCCCEe
Confidence 345678999999999999999654
No 194
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.18 E-value=14 Score=19.95 Aligned_cols=12 Identities=25% Similarity=0.459 Sum_probs=5.8
Q ss_pred eeEeCCCCcccc
Q psy15340 55 DLECPESGRKFP 66 (81)
Q Consensus 55 ~L~C~~c~~~yp 66 (81)
...|+.|++.|.
T Consensus 15 ~~~C~~C~k~f~ 26 (77)
T 2ct1_A 15 PYECYICHARFT 26 (77)
T ss_dssp SEECTTTCCEES
T ss_pred CeECCCcCchhC
Confidence 344555555543
No 195
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=36.04 E-value=15 Score=18.35 Aligned_cols=16 Identities=13% Similarity=0.189 Sum_probs=12.9
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-.
T Consensus 27 ~~~~~C~~C~~~f~~~ 42 (57)
T 1bbo_A 27 VRPYHCTYCNFSFKTK 42 (57)
T ss_dssp CCCEECSSSSCEESSH
T ss_pred CCCccCCCCCchhcCH
Confidence 4568999999999654
No 196
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.89 E-value=9.5 Score=18.56 Aligned_cols=16 Identities=31% Similarity=0.567 Sum_probs=12.2
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytm_A 10 EKPYKCMECGKAFGDN 25 (46)
T ss_dssp CCSSSBTTTTBCCSSH
T ss_pred CCCcCCCCCCchhCCH
Confidence 3457899999999643
No 197
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=35.68 E-value=22 Score=19.61 Aligned_cols=18 Identities=28% Similarity=0.528 Sum_probs=13.6
Q ss_pred eeEeCCCCccccccCCcc
Q psy15340 55 DLECPESGRKFPISSGIP 72 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dGIP 72 (81)
..+|..||..|.=..|-|
T Consensus 2 ~~~C~~CGyvYd~~~Gdp 19 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDP 19 (52)
T ss_dssp EEEESSSSCEEETTTCBG
T ss_pred cEEeCCCCeEECCCcCCc
Confidence 468999999997665544
No 198
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=35.26 E-value=12 Score=18.00 Aligned_cols=16 Identities=31% Similarity=0.636 Sum_probs=12.2
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (45)
T 2epq_A 8 EKPYSCPVCGLRFKRK 23 (45)
T ss_dssp CCSSEETTTTEECSCH
T ss_pred CCCCcCCCCCcccCCH
Confidence 3457899999999643
No 199
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=35.10 E-value=16 Score=18.51 Aligned_cols=17 Identities=24% Similarity=0.358 Sum_probs=13.3
Q ss_pred cceeEeCCCCccccccC
Q psy15340 53 EGDLECPESGRKFPISS 69 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~d 69 (81)
+....|+.|++.|.-+.
T Consensus 28 ~~~~~C~~C~~~f~~~~ 44 (60)
T 2adr_A 28 EKPYPCGLCNRAFTRRD 44 (60)
T ss_dssp SCSEECTTTCCEESSHH
T ss_pred CCCccCCCCCCccCCHH
Confidence 45689999999997543
No 200
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=35.07 E-value=15 Score=21.75 Aligned_cols=13 Identities=23% Similarity=0.547 Sum_probs=6.2
Q ss_pred eEeCCCCccccccC
Q psy15340 56 LECPESGRKFPISS 69 (81)
Q Consensus 56 L~C~~c~~~ypI~d 69 (81)
+.|| ||+.+-+++
T Consensus 5 v~C~-C~~~~~~~~ 17 (71)
T 1gh9_A 5 FRCD-CGRALYSRE 17 (71)
T ss_dssp EEET-TSCCEEEET
T ss_pred EECC-CCCEEEEcC
Confidence 3455 555544443
No 201
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=34.94 E-value=22 Score=22.19 Aligned_cols=16 Identities=13% Similarity=0.198 Sum_probs=14.7
Q ss_pred eeEeCCCCccccccCC
Q psy15340 55 DLECPESGRKFPISSG 70 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dG 70 (81)
.++|+.|+..++|.+.
T Consensus 26 ~~~C~~C~y~~~~~~~ 41 (113)
T 3h0g_I 26 RLACRNCDYSEIAATS 41 (113)
T ss_dssp CEECSSSCCEECCSCS
T ss_pred EEECCCCCCeEEcCCC
Confidence 7999999999999876
No 202
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=34.43 E-value=23 Score=19.53 Aligned_cols=18 Identities=22% Similarity=0.436 Sum_probs=13.5
Q ss_pred eeEeCCCCccccccCCcc
Q psy15340 55 DLECPESGRKFPISSGIP 72 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dGIP 72 (81)
.-+|+.||..|.=..|-|
T Consensus 3 ~y~C~~CGyvYd~~~Gdp 20 (52)
T 1e8j_A 3 IYVCTVCGYEYDPAKGDP 20 (52)
T ss_dssp CEECSSSCCCCCTTTCCT
T ss_pred cEEeCCCCeEEcCCcCCc
Confidence 468999999997655544
No 203
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=34.14 E-value=15 Score=25.75 Aligned_cols=13 Identities=31% Similarity=0.685 Sum_probs=10.5
Q ss_pred cceeEeCCCCccc
Q psy15340 53 EGDLECPESGRKF 65 (81)
Q Consensus 53 eg~L~C~~c~~~y 65 (81)
++-.+||.|||.-
T Consensus 220 ~~Iv~Cp~CgRIL 232 (256)
T 3na7_A 220 GDMITCPYCGRIL 232 (256)
T ss_dssp SSCEECTTTCCEE
T ss_pred CCEEECCCCCeeE
Confidence 4569999999853
No 204
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=34.05 E-value=22 Score=21.83 Aligned_cols=26 Identities=27% Similarity=0.589 Sum_probs=20.6
Q ss_pred eeccceeEeCCCCccccccCCccccC
Q psy15340 50 EVVEGDLECPESGRKFPISSGIPNML 75 (81)
Q Consensus 50 ~v~eg~L~C~~c~~~ypI~dGIP~ml 75 (81)
.+.++.++||--|-.|-+++|-..-.
T Consensus 64 ~~~~~~i~CP~Hg~~Fdl~tG~~~~~ 89 (121)
T 3gce_A 64 HAESLEIECPLHVGRFDVRTGAPTAL 89 (121)
T ss_dssp ETTTTEEECTTTCCEEETTTCCEEET
T ss_pred eecCCEEEcCCCCCEEcCCCccEeCC
Confidence 44577899999999999999865433
No 205
>2nn6_I 3'-5' exoribonuclease CSL4 homolog; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2
Probab=34.04 E-value=17 Score=25.06 Aligned_cols=15 Identities=20% Similarity=0.348 Sum_probs=12.1
Q ss_pred ccceeEeCCCCcccc
Q psy15340 52 VEGDLECPESGRKFP 66 (81)
Q Consensus 52 ~eg~L~C~~c~~~yp 66 (81)
.+.+|.||.||+..+
T Consensus 182 ~~~~m~cp~cg~~E~ 196 (209)
T 2nn6_I 182 SWCEMQCPKTHTKEF 196 (209)
T ss_dssp ETTEEECTTTTCCBC
T ss_pred cCCEEECCCCCCEEe
Confidence 358999999998764
No 206
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.79 E-value=14 Score=17.87 Aligned_cols=16 Identities=38% Similarity=0.700 Sum_probs=12.3
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytt_A 10 EKPYQCSECGKSFSGS 25 (46)
T ss_dssp CCTTCCSSSCCCCSSH
T ss_pred CCCeeCCCCCcccCCH
Confidence 3457899999999743
No 207
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=33.38 E-value=21 Score=24.73 Aligned_cols=26 Identities=12% Similarity=0.311 Sum_probs=18.6
Q ss_pred ceeeeeccceeEeCCCCccccccCCc
Q psy15340 46 LLEVEVVEGDLECPESGRKFPISSGI 71 (81)
Q Consensus 46 ll~~~v~eg~L~C~~c~~~ypI~dGI 71 (81)
+++.+-.-..+.|..|++.|+..+-+
T Consensus 104 v~elHG~~~~~~C~~C~~~~~~~~~~ 129 (235)
T 1s5p_A 104 VIHMHGELLKVRCSQSGQVLDWTGDV 129 (235)
T ss_dssp CEETTEEEEEEEETTTCCEEECCSCC
T ss_pred EEEecCCceEEEeCCCCCcccchhhc
Confidence 44444455678999999999976533
No 208
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.20 E-value=18 Score=19.21 Aligned_cols=15 Identities=33% Similarity=0.629 Sum_probs=10.5
Q ss_pred cceeEeCCCCccccc
Q psy15340 53 EGDLECPESGRKFPI 67 (81)
Q Consensus 53 eg~L~C~~c~~~ypI 67 (81)
+....|+.|++.|.-
T Consensus 12 ~k~~~C~~C~k~f~~ 26 (72)
T 1x6e_A 12 EKPYGCVECGKAFSR 26 (72)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCccCCCCCCccCC
Confidence 345778888887754
No 209
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.20 E-value=17 Score=19.13 Aligned_cols=13 Identities=15% Similarity=0.253 Sum_probs=8.1
Q ss_pred eeEeCCCCccccc
Q psy15340 55 DLECPESGRKFPI 67 (81)
Q Consensus 55 ~L~C~~c~~~ypI 67 (81)
...|+.|++.|.-
T Consensus 9 ~~~C~~C~k~f~~ 21 (70)
T 1x5w_A 9 PEKCSECSYSCSS 21 (70)
T ss_dssp SEECSSSSCEESS
T ss_pred CeECCCCCcccCC
Confidence 4566777766653
No 210
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=33.09 E-value=11 Score=20.15 Aligned_cols=19 Identities=21% Similarity=0.735 Sum_probs=15.0
Q ss_pred ceeEeCCCCccccccCCcc
Q psy15340 54 GDLECPESGRKFPISSGIP 72 (81)
Q Consensus 54 g~L~C~~c~~~ypI~dGIP 72 (81)
....||.|+..+.+.++-.
T Consensus 36 ~~~~CP~Cr~~~~~~~~~~ 54 (56)
T 1bor_A 36 SGMQCPICQAPWPLGADTP 54 (56)
T ss_dssp SSSSCSSCCSSSSCCSSCC
T ss_pred CCCCCCcCCcEeecCCcCc
Confidence 5778999999998876543
No 211
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=32.98 E-value=18 Score=19.94 Aligned_cols=13 Identities=23% Similarity=0.616 Sum_probs=7.8
Q ss_pred ceeEeCCCCcccc
Q psy15340 54 GDLECPESGRKFP 66 (81)
Q Consensus 54 g~L~C~~c~~~yp 66 (81)
....|+.|++.|.
T Consensus 6 ~~~~C~~C~~~f~ 18 (95)
T 2yt9_A 6 SGVACEICGKIFR 18 (95)
T ss_dssp SCEECSSSCCEES
T ss_pred CCeECCCCCCccC
Confidence 3456666666664
No 212
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=32.83 E-value=15 Score=21.32 Aligned_cols=23 Identities=17% Similarity=0.361 Sum_probs=14.8
Q ss_pred cceeEeCCCCccccccCCccccC
Q psy15340 53 EGDLECPESGRKFPISSGIPNML 75 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~dGIP~ml 75 (81)
...+.|+.||.+.-.+.--+.|+
T Consensus 36 ~~~iRC~~CG~RILyK~Rt~r~~ 58 (63)
T 3h0g_L 36 KEVIRCRECGHRVMYKMRTKRMV 58 (63)
T ss_dssp SSCCCCSSSCCCCCBCCCCCCCE
T ss_pred CCceECCCCCcEEEEEecCCceE
Confidence 35677777777766665555554
No 213
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.80 E-value=18 Score=19.42 Aligned_cols=12 Identities=25% Similarity=0.445 Sum_probs=6.3
Q ss_pred eeEeCCCCcccc
Q psy15340 55 DLECPESGRKFP 66 (81)
Q Consensus 55 ~L~C~~c~~~yp 66 (81)
...|+.|++.|.
T Consensus 7 ~~~C~~C~k~f~ 18 (78)
T 2d9h_A 7 GLQCEICGFTCR 18 (78)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCCeeC
Confidence 345555555553
No 214
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=32.59 E-value=23 Score=21.05 Aligned_cols=24 Identities=29% Similarity=0.475 Sum_probs=19.5
Q ss_pred eeccceeEeCCCCccccccCCccc
Q psy15340 50 EVVEGDLECPESGRKFPISSGIPN 73 (81)
Q Consensus 50 ~v~eg~L~C~~c~~~ypI~dGIP~ 73 (81)
.+.++.++||--|-.|-+++|-..
T Consensus 56 ~~~~~~i~Cp~Hg~~Fdl~tG~~~ 79 (108)
T 2i7f_A 56 YQDGTIIECPFHGGSFDIATGAAK 79 (108)
T ss_dssp EEETTEEECSSTTCEEETTTCCBC
T ss_pred EEeCCEEEcCCCCCEEeCCCcCEe
Confidence 345678999999999999888654
No 215
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=32.57 E-value=27 Score=20.40 Aligned_cols=19 Identities=26% Similarity=0.510 Sum_probs=13.3
Q ss_pred ceeEeCCCCccccccCCcc
Q psy15340 54 GDLECPESGRKFPISSGIP 72 (81)
Q Consensus 54 g~L~C~~c~~~ypI~dGIP 72 (81)
..-+|+.||..|.=..|-|
T Consensus 6 ~~y~C~vCGyiYd~~~Gdp 24 (70)
T 1dx8_A 6 GKYECEACGYIYEPEKGDK 24 (70)
T ss_dssp SCEEETTTCCEECTTTCCT
T ss_pred ceEEeCCCCEEEcCCCCCc
Confidence 4678888888887555443
No 216
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=32.23 E-value=20 Score=18.13 Aligned_cols=15 Identities=20% Similarity=0.434 Sum_probs=11.0
Q ss_pred cceeEeCCCCccccc
Q psy15340 53 EGDLECPESGRKFPI 67 (81)
Q Consensus 53 eg~L~C~~c~~~ypI 67 (81)
+....|+.|++.|.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (54)
T 2eps_A 10 GKPYICQSCGKGFSR 24 (54)
T ss_dssp SCCEECSSSCCEESS
T ss_pred CCCeECCCCCcccCC
Confidence 445788888888854
No 217
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=32.08 E-value=26 Score=21.24 Aligned_cols=19 Identities=21% Similarity=0.452 Sum_probs=14.8
Q ss_pred ceeEeCCCCccccccCCcc
Q psy15340 54 GDLECPESGRKFPISSGIP 72 (81)
Q Consensus 54 g~L~C~~c~~~ypI~dGIP 72 (81)
...+|+.||..|.=..|-|
T Consensus 26 ~~y~C~vCGyvYD~~~Gdp 44 (81)
T 2kn9_A 26 KLFRCIQCGFEYDEALGWP 44 (81)
T ss_dssp CEEEETTTCCEEETTTCBT
T ss_pred ceEEeCCCCEEEcCCcCCc
Confidence 4789999999998655443
No 218
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=32.01 E-value=21 Score=19.48 Aligned_cols=13 Identities=15% Similarity=0.457 Sum_probs=9.6
Q ss_pred eeEeCCCCccccc
Q psy15340 55 DLECPESGRKFPI 67 (81)
Q Consensus 55 ~L~C~~c~~~ypI 67 (81)
-.+|..||+.|..
T Consensus 43 fy~C~~Cg~~w~~ 55 (57)
T 1qyp_A 43 FYKCTKCGHTWRS 55 (57)
T ss_dssp EEEESSSCCEEEC
T ss_pred EEEcCCCCCEecc
Confidence 4678888887754
No 219
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=31.42 E-value=15 Score=19.57 Aligned_cols=15 Identities=13% Similarity=0.386 Sum_probs=10.5
Q ss_pred cceeEeCCCCccccc
Q psy15340 53 EGDLECPESGRKFPI 67 (81)
Q Consensus 53 eg~L~C~~c~~~ypI 67 (81)
+....|+.|++.|.-
T Consensus 15 ~~~~~C~~C~k~f~~ 29 (74)
T 2lce_A 15 DKPYKCDRCQASFRY 29 (74)
T ss_dssp CCSBCCTTSSCCBSC
T ss_pred CCCeECCCCCceeCC
Confidence 345678888888764
No 220
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=31.37 E-value=27 Score=19.51 Aligned_cols=18 Identities=22% Similarity=0.479 Sum_probs=13.1
Q ss_pred eeEeCCCCccccccCCcc
Q psy15340 55 DLECPESGRKFPISSGIP 72 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dGIP 72 (81)
..+|+.||..|.=..|-|
T Consensus 3 ~y~C~vCGyvYd~~~Gdp 20 (54)
T 4rxn_A 3 KYTCTVCGYIYDPEDGDP 20 (54)
T ss_dssp CEEETTTCCEECTTTCBG
T ss_pred ceECCCCCeEECCCcCCc
Confidence 468999999997655533
No 221
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.22 E-value=28 Score=17.92 Aligned_cols=20 Identities=20% Similarity=0.326 Sum_probs=14.7
Q ss_pred ccceeEeCCCCccccccCCc
Q psy15340 52 VEGDLECPESGRKFPISSGI 71 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~dGI 71 (81)
.+....|+.|++.|.-+...
T Consensus 15 ~~~~~~C~~C~k~f~~~~~l 34 (73)
T 2ctu_A 15 GDRSQKCSKCGIIFIRRSTL 34 (73)
T ss_dssp CCSEEECSSSCCEEECCCCC
T ss_pred CCCCeeCCcccchhCCHHHh
Confidence 34568999999999765543
No 222
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=31.19 E-value=15 Score=18.85 Aligned_cols=14 Identities=36% Similarity=0.536 Sum_probs=12.1
Q ss_pred eeEeCCCCcccccc
Q psy15340 55 DLECPESGRKFPIS 68 (81)
Q Consensus 55 ~L~C~~c~~~ypI~ 68 (81)
.|.|..||...+|+
T Consensus 21 ~l~C~aCG~~~~v~ 34 (36)
T 1k81_A 21 LLKCMACGAIRPIR 34 (36)
T ss_dssp EEEEETTTEEEEEC
T ss_pred EEEhhcCCCccccc
Confidence 68899999999884
No 223
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=31.16 E-value=72 Score=21.81 Aligned_cols=17 Identities=0% Similarity=-0.361 Sum_probs=15.3
Q ss_pred cccHHHHHHHHHHhCCC
Q psy15340 4 KLDWSAFYKATLMLGDA 20 (81)
Q Consensus 4 kldw~al~~aa~~lg~~ 20 (81)
.+||..+.++.++.|+.
T Consensus 263 ~id~~~i~~~L~~~gy~ 279 (316)
T 3qxb_A 263 VVTPQRLQDFWDKYALT 279 (316)
T ss_dssp SCCHHHHHHHHHHTTCS
T ss_pred eECHHHHHHHHHHcCCC
Confidence 58999999999999973
No 224
>3m7n_A Putative uncharacterized protein AF_0206; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 2ba1_A 3m85_A
Probab=30.60 E-value=20 Score=23.95 Aligned_cols=15 Identities=40% Similarity=0.594 Sum_probs=11.9
Q ss_pred ccceeEeCCCCcccc
Q psy15340 52 VEGDLECPESGRKFP 66 (81)
Q Consensus 52 ~eg~L~C~~c~~~yp 66 (81)
.+.+|.||.||..-+
T Consensus 153 ~~~~~~cp~~g~~e~ 167 (179)
T 3m7n_A 153 EGDILKCPECGRVEK 167 (179)
T ss_dssp CSSSEECSSSCCEEC
T ss_pred CCCEEECCCCCCEEE
Confidence 448999999998654
No 225
>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D*
Probab=30.57 E-value=26 Score=21.25 Aligned_cols=24 Identities=29% Similarity=0.681 Sum_probs=19.5
Q ss_pred eeccceeEeCCCCccccccCCccc
Q psy15340 50 EVVEGDLECPESGRKFPISSGIPN 73 (81)
Q Consensus 50 ~v~eg~L~C~~c~~~ypI~dGIP~ 73 (81)
.+.++.++||--|-.|-+++|-..
T Consensus 57 ~~~~~~i~CP~Hg~~Fdl~tG~~~ 80 (115)
T 2de6_D 57 TLDGDVIECPFHGGAFNVCTGMPA 80 (115)
T ss_dssp EEETTEEECTTTCCEEETTTCCEE
T ss_pred EEeCCEEECCCCCCEEcCCCcCEe
Confidence 345678999999999999988654
No 226
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=30.42 E-value=28 Score=19.72 Aligned_cols=16 Identities=6% Similarity=0.156 Sum_probs=14.3
Q ss_pred ccHHHHHHHHHHhCCC
Q psy15340 5 LDWSAFYKATLMLGDA 20 (81)
Q Consensus 5 ldw~al~~aa~~lg~~ 20 (81)
++|=.|...|+++|++
T Consensus 13 ~ewl~LI~~Ak~lGls 28 (57)
T 1b0n_B 13 QEWVELMVEAKEANIS 28 (57)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCC
Confidence 5799999999999983
No 227
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.36 E-value=20 Score=20.87 Aligned_cols=14 Identities=21% Similarity=0.430 Sum_probs=12.2
Q ss_pred ccceeEeCCCCccc
Q psy15340 52 VEGDLECPESGRKF 65 (81)
Q Consensus 52 ~eg~L~C~~c~~~y 65 (81)
.+....|+.|++.|
T Consensus 31 ~~~~~~C~~C~k~F 44 (96)
T 2ctd_A 31 DKGSVSCPTCQAVG 44 (96)
T ss_dssp HTSCEECTTTCSCE
T ss_pred CCCCcCCCCCCCCc
Confidence 46678999999999
No 228
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.33 E-value=15 Score=21.06 Aligned_cols=15 Identities=20% Similarity=0.388 Sum_probs=12.6
Q ss_pred ccceeEeCCCCcccc
Q psy15340 52 VEGDLECPESGRKFP 66 (81)
Q Consensus 52 ~eg~L~C~~c~~~yp 66 (81)
.+....|+.|++.|.
T Consensus 21 ~~~~~~C~~C~k~f~ 35 (98)
T 2gqj_A 21 ERGEAVCPTCNVVTR 35 (98)
T ss_dssp TTSCCCCTTTCCCCS
T ss_pred cCCCcCCCCCCCChh
Confidence 356789999999997
No 229
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=30.00 E-value=21 Score=18.91 Aligned_cols=16 Identities=31% Similarity=0.567 Sum_probs=11.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 55 ~~~~~C~~C~~~f~~~ 70 (82)
T 2kmk_A 55 EKPHKCQVCGKAFSQS 70 (82)
T ss_dssp CCCEECTTTSCEESSH
T ss_pred CCCCcCCCcchhhCCh
Confidence 4568899998888643
No 230
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=29.40 E-value=16 Score=23.72 Aligned_cols=16 Identities=25% Similarity=0.252 Sum_probs=13.5
Q ss_pred eccceeEeCCCCcccc
Q psy15340 51 VVEGDLECPESGRKFP 66 (81)
Q Consensus 51 v~eg~L~C~~c~~~yp 66 (81)
.-++.+.|..|++.|-
T Consensus 46 tGekpfyC~~C~K~F~ 61 (124)
T 1zr9_A 46 PGGGLHRCLACARYFI 61 (124)
T ss_dssp GGGGCSEETTTTEECS
T ss_pred CCCcceEcccCcchhC
Confidence 3467999999999995
No 231
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=29.30 E-value=18 Score=15.67 Aligned_cols=13 Identities=15% Similarity=0.422 Sum_probs=10.1
Q ss_pred eEeC--CCCcccccc
Q psy15340 56 LECP--ESGRKFPIS 68 (81)
Q Consensus 56 L~C~--~c~~~ypI~ 68 (81)
..|+ .|++.|.-.
T Consensus 4 ~~C~~~~C~k~f~~~ 18 (32)
T 1zfd_A 4 YSCDHPGCDKAFVRN 18 (32)
T ss_dssp BCCCCTTCCCCBSSS
T ss_pred CcCcCCCCCCccCCH
Confidence 5688 899999643
No 232
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=29.01 E-value=26 Score=21.72 Aligned_cols=17 Identities=24% Similarity=0.405 Sum_probs=12.2
Q ss_pred ccce--eEeCCCCcccccc
Q psy15340 52 VEGD--LECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~--L~C~~c~~~ypI~ 68 (81)
.+|+ ..|+.|++.|.-.
T Consensus 17 h~Gek~y~C~~C~k~F~~~ 35 (133)
T 2lt7_A 17 VDGRVYYICIVCKRSYVCL 35 (133)
T ss_dssp ETTEEEEEETTTCCEESCH
T ss_pred cCCCcCeECCCCCCCcCCH
Confidence 4454 6899999988643
No 233
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=28.89 E-value=23 Score=19.17 Aligned_cols=17 Identities=24% Similarity=0.458 Sum_probs=12.9
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-.
T Consensus 62 ~~~~~~C~~C~~~f~~~ 78 (89)
T 2wbs_A 62 GHRPFQCQKCDRAFSRS 78 (89)
T ss_dssp CCCCEECSSSSCEESSH
T ss_pred CCCCccCCCCCcccCCH
Confidence 34568999999998654
No 234
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=28.69 E-value=26 Score=20.58 Aligned_cols=11 Identities=27% Similarity=0.718 Sum_probs=5.2
Q ss_pred eEeCCCCcccc
Q psy15340 56 LECPESGRKFP 66 (81)
Q Consensus 56 L~C~~c~~~yp 66 (81)
.+|+.|++.|=
T Consensus 44 v~C~~C~~~FC 54 (86)
T 2ct7_A 44 ATCPQCHQTFC 54 (86)
T ss_dssp EECTTTCCEEC
T ss_pred eEeCCCCCccc
Confidence 44555554443
No 235
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=28.67 E-value=18 Score=19.47 Aligned_cols=12 Identities=17% Similarity=0.576 Sum_probs=6.1
Q ss_pred eeEeCCCCcccc
Q psy15340 55 DLECPESGRKFP 66 (81)
Q Consensus 55 ~L~C~~c~~~yp 66 (81)
...|+.|++.|.
T Consensus 15 ~~~C~~C~~~f~ 26 (86)
T 1x6h_A 15 PYACSHCDKTFR 26 (86)
T ss_dssp CEECSSSSCEES
T ss_pred CCcCCCCCCccC
Confidence 345555555553
No 236
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=28.52 E-value=30 Score=21.27 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=15.2
Q ss_pred cceeEeCCCCccccccCCcc
Q psy15340 53 EGDLECPESGRKFPISSGIP 72 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~dGIP 72 (81)
....+|..||..|.=..|-|
T Consensus 33 m~~y~C~vCGyvYD~~~Gdp 52 (87)
T 1s24_A 33 YLKWICITCGHIYDEALGDE 52 (87)
T ss_dssp CCEEEETTTTEEEETTSCCT
T ss_pred CceEECCCCCeEecCCcCCc
Confidence 35789999999998655443
No 237
>2b9d_A E7 protein; zinc finger, homodimer, transcription, viral protein; 1.60A {Human papillomavirus type 1A} SCOP: g.91.1.1
Probab=27.90 E-value=27 Score=19.41 Aligned_cols=27 Identities=19% Similarity=0.353 Sum_probs=20.7
Q ss_pred cccHHHHHHhhhhceeeeeccceeEeCCCCc
Q psy15340 33 EKDSEFLKKVHHALLEVEVVEGDLECPESGR 63 (81)
Q Consensus 33 ~~~e~~l~~lh~~ll~~~v~eg~L~C~~c~~ 63 (81)
..+++-+|.++..|++ +=.++||.|..
T Consensus 23 ~at~~~IR~lqqLLl~----~L~lvCp~Ca~ 49 (52)
T 2b9d_A 23 LADHSAIRQLEEMLLR----SLNIVCPLCTL 49 (52)
T ss_dssp EECHHHHHHHHHHHHH----TCCCCCTTTTT
T ss_pred EeCchhHHHHHHHhhC----CceEECcchhc
Confidence 3456679999999873 44789999975
No 238
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=27.57 E-value=25 Score=19.02 Aligned_cols=16 Identities=44% Similarity=0.700 Sum_probs=11.8
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-+
T Consensus 60 ~~~~~C~~C~~~f~~~ 75 (90)
T 1a1h_A 60 EKPFACDICGRKFARS 75 (90)
T ss_dssp CCCEECTTTCCEESSH
T ss_pred CCCccCCCCCchhCCH
Confidence 4458888888888643
No 239
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=27.28 E-value=24 Score=23.56 Aligned_cols=19 Identities=21% Similarity=0.338 Sum_probs=14.0
Q ss_pred cceeEeCCCCccccccCCccc
Q psy15340 53 EGDLECPESGRKFPISSGIPN 73 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~dGIP~ 73 (81)
+..-+|+.||..|. .-.|.
T Consensus 136 ~~~~~C~~CG~i~~--~~~p~ 154 (170)
T 3pwf_A 136 KKVYICPICGYTAV--DEAPE 154 (170)
T ss_dssp SCEEECTTTCCEEE--SCCCS
T ss_pred CCeeEeCCCCCeeC--CCCCC
Confidence 34678999999997 34554
No 240
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=27.17 E-value=28 Score=18.59 Aligned_cols=25 Identities=16% Similarity=0.280 Sum_probs=19.2
Q ss_pred ceeEeCCCCcccc---ccCCccccCCCC
Q psy15340 54 GDLECPESGRKFP---ISSGIPNMLLKE 78 (81)
Q Consensus 54 g~L~C~~c~~~yp---I~dGIP~ml~~e 78 (81)
..|-|..|++.|+ ...|=|.++++.
T Consensus 10 ~yl~CE~C~~~~~~~Cp~HGP~~fV~D~ 37 (39)
T 2l9z_A 10 FTIWCTLCDRAYPSDCPEHGPVTFVPDT 37 (39)
T ss_dssp CSEEEGGGTEEESSSBTTTBSCSCCCCC
T ss_pred hhhHHHHHhhhchhhchhcCCCcccCCC
Confidence 4689999999997 457777777654
No 241
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=27.07 E-value=23 Score=20.80 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=17.2
Q ss_pred cceeEeCCCCccccccCCccccC
Q psy15340 53 EGDLECPESGRKFPISSGIPNML 75 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~dGIP~ml 75 (81)
.+...||.|+..+...+=.++..
T Consensus 56 ~~~~~CP~Cr~~~~~~~~~~~~~ 78 (112)
T 1jm7_A 56 KGPSQCPLCKNDITKRSLQESTR 78 (112)
T ss_dssp SSSCCCTTTSCCCCTTTCBCCCS
T ss_pred CCCCCCcCCCCcCCHhhcCccHH
Confidence 35578999999988776666543
No 242
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=26.70 E-value=17 Score=22.17 Aligned_cols=11 Identities=27% Similarity=0.827 Sum_probs=6.4
Q ss_pred ceeEeCCCCcc
Q psy15340 54 GDLECPESGRK 64 (81)
Q Consensus 54 g~L~C~~c~~~ 64 (81)
|.+.||.||..
T Consensus 1 ~~M~Cp~Cg~~ 11 (133)
T 3o9x_A 1 GHMKCPVCHQG 11 (133)
T ss_dssp -CCBCTTTSSS
T ss_pred CCcCCCcCCCC
Confidence 45567777654
No 243
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=26.70 E-value=26 Score=19.02 Aligned_cols=9 Identities=22% Similarity=0.645 Sum_probs=4.3
Q ss_pred EeCCCCccc
Q psy15340 57 ECPESGRKF 65 (81)
Q Consensus 57 ~C~~c~~~y 65 (81)
.|+.||+.|
T Consensus 6 ~C~~C~k~F 14 (60)
T 4gzn_C 6 FCNFCGKTY 14 (60)
T ss_dssp ECTTTCCEE
T ss_pred cCCCCCCEe
Confidence 444444444
No 244
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=26.59 E-value=19 Score=20.25 Aligned_cols=16 Identities=31% Similarity=0.532 Sum_probs=12.1
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+.-..|..|++.|.-+
T Consensus 11 ekpy~C~~CgK~F~~~ 26 (66)
T 2epp_A 11 AGILPCGLCGKVFTDA 26 (66)
T ss_dssp CCCCCCTTTCCCCSCH
T ss_pred ccCcCCCCCCCccCCH
Confidence 3457899999999643
No 245
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=26.38 E-value=27 Score=24.38 Aligned_cols=26 Identities=12% Similarity=0.302 Sum_probs=18.9
Q ss_pred hhceeeeeccceeEeCCCCccccccC
Q psy15340 44 HALLEVEVVEGDLECPESGRKFPISS 69 (81)
Q Consensus 44 ~~ll~~~v~eg~L~C~~c~~~ypI~d 69 (81)
.-+++.+-.-..+.|..|++.|+..+
T Consensus 110 ~~v~elHG~~~~~~C~~C~~~~~~~~ 135 (249)
T 1m2k_A 110 RNVIHLHGSLRVVRCTSCNNSFEVES 135 (249)
T ss_dssp CSEEETTEEEEEEEESSSSCEEECSS
T ss_pred CcEEEecCCcceeEeCCCCCcccchh
Confidence 34555555556889999999998755
No 246
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=26.12 E-value=26 Score=18.74 Aligned_cols=18 Identities=33% Similarity=0.512 Sum_probs=13.7
Q ss_pred ccceeEeCCCCccccccC
Q psy15340 52 VEGDLECPESGRKFPISS 69 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~d 69 (81)
.+....|+.|++.|.-+.
T Consensus 43 ~~~~~~C~~C~~~f~~~~ 60 (77)
T 2cot_A 43 GEKPYKCDECGKAFIQRS 60 (77)
T ss_dssp CSCSEECSSSCCEESSHH
T ss_pred CCcCeeCCCCCCccCCHH
Confidence 345689999999997543
No 247
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.72 E-value=30 Score=18.89 Aligned_cols=19 Identities=11% Similarity=0.272 Sum_probs=14.6
Q ss_pred eeEeCCCCccccccCCccc
Q psy15340 55 DLECPESGRKFPISSGIPN 73 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dGIP~ 73 (81)
...||.|+..+..++-+++
T Consensus 50 ~~~CP~Cr~~~~~~~~~~~ 68 (72)
T 2djb_A 50 SNRCPKCNIVVHQTQPLSG 68 (72)
T ss_dssp CSSCTTTCCCCCSSCSCCC
T ss_pred CCcCCCcCcccCccccccc
Confidence 4679999998887776654
No 248
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=25.46 E-value=20 Score=21.66 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=15.0
Q ss_pred hhceeeeeccceeEeCCCCcc
Q psy15340 44 HALLEVEVVEGDLECPESGRK 64 (81)
Q Consensus 44 ~~ll~~~v~eg~L~C~~c~~~ 64 (81)
|+.+.+-..-...-||.||..
T Consensus 19 ~aCf~~t~~~~k~FCp~CGn~ 39 (79)
T 2con_A 19 HGCFKTTSDMNRVFCGHCGNK 39 (79)
T ss_dssp SSSCCEESCSSCCSCSSSCCS
T ss_pred cccceECCCcccccccccCcc
Confidence 455566666678889999864
No 249
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=25.29 E-value=30 Score=23.17 Aligned_cols=21 Identities=24% Similarity=0.482 Sum_probs=16.8
Q ss_pred ccceeEeCCCCccccccCCcc
Q psy15340 52 VEGDLECPESGRKFPISSGIP 72 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~dGIP 72 (81)
..|..+|+.||+.|.+...-|
T Consensus 121 l~~R~~~~~~g~~y~~~~~pp 141 (206)
T 3sr0_A 121 LSGRRINPETGEVYHVKYNPP 141 (206)
T ss_dssp HHTEEECTTTCCEEETTTBCC
T ss_pred HhCCccccCCCceeeeeccCC
Confidence 458899999999998865444
No 250
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=25.09 E-value=29 Score=25.15 Aligned_cols=24 Identities=4% Similarity=0.095 Sum_probs=17.1
Q ss_pred ceeeeeccceeEeCCCCccccccC
Q psy15340 46 LLEVEVVEGDLECPESGRKFPISS 69 (81)
Q Consensus 46 ll~~~v~eg~L~C~~c~~~ypI~d 69 (81)
+++.+-.=....|..|++.|+..+
T Consensus 145 vielHGs~~~~~C~~C~~~~~~~~ 168 (290)
T 3u31_A 145 VISLHGNVFEAVCCTCNKIVKLNK 168 (290)
T ss_dssp EEETTEEEEEEEETTTCCEEECCT
T ss_pred EEEecCCcCcceeCCCCCcCChhH
Confidence 344444445789999999998765
No 251
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.99 E-value=33 Score=19.11 Aligned_cols=25 Identities=28% Similarity=0.440 Sum_probs=16.2
Q ss_pred eccceeEeCCCCccccccCCccccC
Q psy15340 51 VVEGDLECPESGRKFPISSGIPNML 75 (81)
Q Consensus 51 v~eg~L~C~~c~~~ypI~dGIP~ml 75 (81)
..+..+.|+.|...|.-.+-.|.++
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~ 35 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLL 35 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEEC
T ss_pred hccCCCCCccCCccccccCCCeEEC
Confidence 3455677888887776655556554
No 252
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=24.84 E-value=45 Score=19.19 Aligned_cols=17 Identities=18% Similarity=0.552 Sum_probs=13.6
Q ss_pred cceeEeCCCCccccccC
Q psy15340 53 EGDLECPESGRKFPISS 69 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~d 69 (81)
++...||.|++.|.-++
T Consensus 48 ~~~~~CP~CR~~~~~~~ 64 (78)
T 1e4u_A 48 DENGLCPACRKPYPEDP 64 (78)
T ss_dssp SSCSBCTTTCCBCSSCS
T ss_pred cCCCCCCCCCCccCCCc
Confidence 35689999999998654
No 253
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=24.67 E-value=34 Score=16.67 Aligned_cols=20 Identities=20% Similarity=0.379 Sum_probs=14.4
Q ss_pred eeccceeEeC--CCCccccccC
Q psy15340 50 EVVEGDLECP--ESGRKFPISS 69 (81)
Q Consensus 50 ~v~eg~L~C~--~c~~~ypI~d 69 (81)
+-.+....|+ .|++.|.-+.
T Consensus 13 H~~~k~~~C~~~~C~k~F~~~~ 34 (47)
T 1ncs_A 13 EMPDKTFECLFPGCTKTFKRRY 34 (47)
T ss_dssp EETTTEEECCCTTCCCEECSSS
T ss_pred cCCCCCeECCCCCCCCccCCHH
Confidence 3445678994 8999997554
No 254
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=24.54 E-value=30 Score=21.86 Aligned_cols=18 Identities=17% Similarity=0.019 Sum_probs=15.1
Q ss_pred cceeEeCCCCccccccCC
Q psy15340 53 EGDLECPESGRKFPISSG 70 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~dG 70 (81)
.+.+.|+.|+..+++.+-
T Consensus 24 ~~~~~C~~C~y~~~~~~~ 41 (122)
T 1twf_I 24 RLLFECRTCSYVEEAGSP 41 (122)
T ss_dssp EEEEECSSSSCEEECSCS
T ss_pred CCEEECCcCCCeeecCcc
Confidence 468999999999998753
No 255
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=24.51 E-value=34 Score=15.57 Aligned_cols=15 Identities=13% Similarity=0.344 Sum_probs=11.2
Q ss_pred ceeEeC--CCCcccccc
Q psy15340 54 GDLECP--ESGRKFPIS 68 (81)
Q Consensus 54 g~L~C~--~c~~~ypI~ 68 (81)
....|+ .|++.|.-+
T Consensus 7 k~~~C~~~~C~k~f~~~ 23 (37)
T 1va1_A 7 KQHICHIQGCGKVYGKT 23 (37)
T ss_dssp CCEECCSTTCCCEESCH
T ss_pred CCCCCCCCCCCCccCCH
Confidence 457897 599999643
No 256
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=24.44 E-value=25 Score=28.54 Aligned_cols=18 Identities=28% Similarity=0.787 Sum_probs=16.2
Q ss_pred eEeCCCCccccccCCccc
Q psy15340 56 LECPESGRKFPISSGIPN 73 (81)
Q Consensus 56 L~C~~c~~~ypI~dGIP~ 73 (81)
..|..||=+|.|..++|-
T Consensus 40 ~nCt~CGPR~tii~~lPY 57 (657)
T 3ttc_A 40 INCTHCGPRFTIIRAMPY 57 (657)
T ss_dssp CCBTTBBCSGGGBSSSSC
T ss_pred ccCcCCCchHHhcccCCC
Confidence 469999999999999993
No 257
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=24.34 E-value=24 Score=19.45 Aligned_cols=13 Identities=31% Similarity=0.726 Sum_probs=7.6
Q ss_pred ceeEeCCCCcccc
Q psy15340 54 GDLECPESGRKFP 66 (81)
Q Consensus 54 g~L~C~~c~~~yp 66 (81)
+...|+.|++.|.
T Consensus 7 ~~~~C~~C~~~f~ 19 (96)
T 2dmd_A 7 GPHKCEVCGKCFS 19 (96)
T ss_dssp CCCCBTTTTBCCC
T ss_pred cCeECCCCCCccC
Confidence 3455666666664
No 258
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=24.33 E-value=30 Score=20.39 Aligned_cols=15 Identities=20% Similarity=0.525 Sum_probs=11.8
Q ss_pred ceeEeCCCCcccccc
Q psy15340 54 GDLECPESGRKFPIS 68 (81)
Q Consensus 54 g~L~C~~c~~~ypI~ 68 (81)
-...||.||+.+.-+
T Consensus 8 ~~~~CP~Cgkp~~W~ 22 (68)
T 1lv3_A 8 ITVNCPTCGKTVVWG 22 (68)
T ss_dssp CEEECTTTCCEEECS
T ss_pred CcCcCCCCCCccccc
Confidence 356899999998754
No 259
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=24.15 E-value=27 Score=28.66 Aligned_cols=18 Identities=28% Similarity=0.750 Sum_probs=15.9
Q ss_pred eEeCCCCccccccCCccc
Q psy15340 56 LECPESGRKFPISSGIPN 73 (81)
Q Consensus 56 L~C~~c~~~ypI~dGIP~ 73 (81)
..|..||=+|.|..++|-
T Consensus 129 ~nCt~CGPR~tii~~lPY 146 (772)
T 4g9i_A 129 IVCTNCGPRFTIIEDLPY 146 (772)
T ss_dssp CCCTTSSCCGGGCCSSSC
T ss_pred ccCCCCCchhhhhhcCCC
Confidence 469999999999999983
No 260
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=24.09 E-value=26 Score=24.47 Aligned_cols=14 Identities=36% Similarity=0.721 Sum_probs=12.2
Q ss_pred cceeEeCCCCcccc
Q psy15340 53 EGDLECPESGRKFP 66 (81)
Q Consensus 53 eg~L~C~~c~~~yp 66 (81)
.+.|+|..|+..|.
T Consensus 167 ~~~L~C~~C~~~f~ 180 (204)
T 3sp4_A 167 QEDLKCWRCGETFG 180 (204)
T ss_dssp GSCCBCTTTCCBCT
T ss_pred CCCceeCCCCchhh
Confidence 78999999998773
No 261
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=23.98 E-value=34 Score=15.41 Aligned_cols=15 Identities=20% Similarity=0.525 Sum_probs=11.3
Q ss_pred ceeEeC--CCCcccccc
Q psy15340 54 GDLECP--ESGRKFPIS 68 (81)
Q Consensus 54 g~L~C~--~c~~~ypI~ 68 (81)
....|+ .|++.|.-+
T Consensus 5 k~~~C~~~~C~k~f~~~ 21 (38)
T 1bhi_A 5 KPFLCTAPGCGQRFTNE 21 (38)
T ss_dssp CCEECCCTTTCCEESSH
T ss_pred cceECCCCCCCcccCCH
Confidence 347898 699999644
No 262
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=23.84 E-value=42 Score=19.94 Aligned_cols=24 Identities=17% Similarity=0.162 Sum_probs=18.8
Q ss_pred eeccceeEeCCCCccccccCCccc
Q psy15340 50 EVVEGDLECPESGRKFPISSGIPN 73 (81)
Q Consensus 50 ~v~eg~L~C~~c~~~ypI~dGIP~ 73 (81)
.+.++.++||--|-.|-++.|-..
T Consensus 55 ~~~~~~i~Cp~Hg~~Fd~~tG~~~ 78 (111)
T 1vm9_A 55 SYEGGVITCRAHLWTFNDGTGHGI 78 (111)
T ss_dssp EEETTEEECTTTCCEEETTTCBBS
T ss_pred eEcCCEEEcCCCCCEEeCCCccCC
Confidence 345678999999999999878543
No 263
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=23.72 E-value=26 Score=20.13 Aligned_cols=14 Identities=14% Similarity=0.524 Sum_probs=11.3
Q ss_pred ccceeEeCCCCccc
Q psy15340 52 VEGDLECPESGRKF 65 (81)
Q Consensus 52 ~eg~L~C~~c~~~y 65 (81)
....-.||.|+..|
T Consensus 23 ~~akY~CPrC~~rY 36 (59)
T 1x4s_A 23 QPARYTCPRCNAPY 36 (59)
T ss_dssp EEECEECTTTCCEE
T ss_pred CCccccCcCCCCCc
Confidence 45688999999887
No 264
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=23.55 E-value=28 Score=21.29 Aligned_cols=23 Identities=17% Similarity=0.182 Sum_probs=19.7
Q ss_pred eeccceeEeCCCCccccccCCcc
Q psy15340 50 EVVEGDLECPESGRKFPISSGIP 72 (81)
Q Consensus 50 ~v~eg~L~C~~c~~~ypI~dGIP 72 (81)
-..+|.+.|+.+...|...+||+
T Consensus 98 ~~~~~~~yC~~~~~~~~~~~g~~ 120 (122)
T 1m3v_A 98 GDEDERLITRLENTQFDAANGID 120 (122)
T ss_dssp CCTTCCCCEECTTTTTTCCSCCC
T ss_pred EecCCEeEccCcchhchhhcCCC
Confidence 35778899999999999999986
No 265
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=23.53 E-value=33 Score=18.80 Aligned_cols=11 Identities=45% Similarity=0.969 Sum_probs=5.3
Q ss_pred eEeCCCCcccc
Q psy15340 56 LECPESGRKFP 66 (81)
Q Consensus 56 L~C~~c~~~yp 66 (81)
..|+.|++.|.
T Consensus 32 ~~C~~C~k~f~ 42 (88)
T 1llm_C 32 FACDICGRKFA 42 (88)
T ss_dssp EECTTTCCEES
T ss_pred ccCCCCCCccC
Confidence 34555555543
No 266
>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B*
Probab=23.34 E-value=44 Score=19.96 Aligned_cols=23 Identities=22% Similarity=0.307 Sum_probs=18.0
Q ss_pred eccceeEeCCCCccccccCCccc
Q psy15340 51 VVEGDLECPESGRKFPISSGIPN 73 (81)
Q Consensus 51 v~eg~L~C~~c~~~ypI~dGIP~ 73 (81)
+.++.++||--|-.|-+++|-..
T Consensus 59 ~~~~~i~CP~Hg~~Fd~~tG~~~ 81 (112)
T 1fqt_A 59 LEGDVVECSLHMGKFCVRTGKVK 81 (112)
T ss_dssp EETTEEECTTTCCEEETTTCCEE
T ss_pred EcCCEEECCCCCCEEeCCCCcEe
Confidence 34568999999999999888643
No 267
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=23.19 E-value=31 Score=19.78 Aligned_cols=13 Identities=15% Similarity=0.220 Sum_probs=10.0
Q ss_pred ceeEeCCCCcccc
Q psy15340 54 GDLECPESGRKFP 66 (81)
Q Consensus 54 g~L~C~~c~~~yp 66 (81)
-..+|+.||-.|-
T Consensus 35 p~~~C~~CGE~~~ 47 (78)
T 3ga8_A 35 HGLYCVHCEESIM 47 (78)
T ss_dssp EEEEETTTCCEEC
T ss_pred eeEECCCCCCEEE
Confidence 3678999998773
No 268
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.89 E-value=23 Score=18.81 Aligned_cols=12 Identities=33% Similarity=0.371 Sum_probs=7.6
Q ss_pred ceeEeCCCCccc
Q psy15340 54 GDLECPESGRKF 65 (81)
Q Consensus 54 g~L~C~~c~~~y 65 (81)
....|+.|++.|
T Consensus 67 ~~~~C~~C~k~F 78 (79)
T 2dlk_A 67 RDYICEFSGPSS 78 (79)
T ss_dssp CCCSCCSSSCCC
T ss_pred CCeeCCCCCCCC
Confidence 446677777666
No 269
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=22.61 E-value=42 Score=22.29 Aligned_cols=15 Identities=27% Similarity=0.676 Sum_probs=12.2
Q ss_pred ccceeEeCCCCcccc
Q psy15340 52 VEGDLECPESGRKFP 66 (81)
Q Consensus 52 ~eg~L~C~~c~~~yp 66 (81)
.+|...|+.|+..||
T Consensus 59 ~~g~~~CekC~~~~~ 73 (181)
T 1l1o_C 59 QNGLYRCEKCDTEFP 73 (181)
T ss_dssp TTTEEEETTTTEEES
T ss_pred CCCeEECCCCCCcCC
Confidence 457899999998874
No 270
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.51 E-value=35 Score=19.33 Aligned_cols=17 Identities=18% Similarity=0.243 Sum_probs=12.5
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-+
T Consensus 62 ~~~~~~C~~C~~~f~~~ 78 (110)
T 2csh_A 62 GIKPYECNICAKRFMWR 78 (110)
T ss_dssp CCCCEECSSSCCEESCH
T ss_pred CCCCeeCCCCcchhcCH
Confidence 34568899999888654
No 271
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=22.31 E-value=29 Score=28.59 Aligned_cols=18 Identities=33% Similarity=0.829 Sum_probs=15.9
Q ss_pred eEeCCCCccccccCCccc
Q psy15340 56 LECPESGRKFPISSGIPN 73 (81)
Q Consensus 56 L~C~~c~~~ypI~dGIP~ 73 (81)
..|..||=+|.|..++|-
T Consensus 134 ~nCt~CGPR~tii~~lPY 151 (761)
T 3vth_A 134 INCTNCGPRFSIIEDIPY 151 (761)
T ss_dssp CCBTTBBCSGGGBCSSSC
T ss_pred ccCCCCCcchhhhccCCC
Confidence 469999999999999983
No 272
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.00 E-value=32 Score=18.56 Aligned_cols=15 Identities=20% Similarity=0.412 Sum_probs=10.7
Q ss_pred ceeEeCCCCcccccc
Q psy15340 54 GDLECPESGRKFPIS 68 (81)
Q Consensus 54 g~L~C~~c~~~ypI~ 68 (81)
+...||.|+..+...
T Consensus 56 ~~~~CP~Cr~~~~~~ 70 (73)
T 2ysl_A 56 GFFKCPLCKTSVRKN 70 (73)
T ss_dssp SCCCCSSSCCCCCCC
T ss_pred CCCCCCCCCCcCCcc
Confidence 566788888877654
No 273
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.79 E-value=35 Score=18.70 Aligned_cols=14 Identities=36% Similarity=0.461 Sum_probs=8.6
Q ss_pred EeCCCCccccccCC
Q psy15340 57 ECPESGRKFPISSG 70 (81)
Q Consensus 57 ~C~~c~~~ypI~dG 70 (81)
.||.|+..+.-..|
T Consensus 62 ~CP~Cr~~~~~~~g 75 (75)
T 1x4j_A 62 TCPICRADSGPSSG 75 (75)
T ss_dssp SCTTTCCCCCCCCC
T ss_pred cCcCcCCcCCCCCC
Confidence 57777666655544
No 274
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=21.76 E-value=40 Score=23.48 Aligned_cols=26 Identities=19% Similarity=0.369 Sum_probs=19.4
Q ss_pred hhceeeeeccceeEeCCCCccccccC
Q psy15340 44 HALLEVEVVEGDLECPESGRKFPISS 69 (81)
Q Consensus 44 ~~ll~~~v~eg~L~C~~c~~~ypI~d 69 (81)
.-+++.+-.-..+.|..|++.|+..+
T Consensus 112 ~~v~elHG~~~~~~C~~C~~~~~~~~ 137 (253)
T 1ma3_A 112 RRVLELHGSMDKLDCLDCHETYDWSE 137 (253)
T ss_dssp CSEEETTEEEEEEEETTTCCEEEGGG
T ss_pred CCEEEeCCCcCeeeeCCCCCcCcHHH
Confidence 44556665666889999999998754
No 275
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.68 E-value=36 Score=19.46 Aligned_cols=13 Identities=8% Similarity=0.534 Sum_probs=8.4
Q ss_pred ceeEeCCCCcccc
Q psy15340 54 GDLECPESGRKFP 66 (81)
Q Consensus 54 g~L~C~~c~~~yp 66 (81)
....|+.|++.|.
T Consensus 18 ~~~~C~~C~k~f~ 30 (115)
T 2dmi_A 18 SKFRCKDCSAAYD 30 (115)
T ss_dssp CSEEBSSSSCEES
T ss_pred CCEECCccCchhc
Confidence 4466777777665
No 276
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=21.36 E-value=39 Score=20.05 Aligned_cols=23 Identities=17% Similarity=0.224 Sum_probs=18.3
Q ss_pred eeEeCCCCccccccCCccccCCC
Q psy15340 55 DLECPESGRKFPISSGIPNMLLK 77 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dGIP~ml~~ 77 (81)
.-.||.|+..+..++-.++.+.+
T Consensus 48 ~~~CP~Cr~~~~~~~l~~l~i~~ 70 (133)
T 4ap4_A 48 ANTCPTCRKKINHKRYHPIYIGS 70 (133)
T ss_dssp CSBCTTTCCBCTTTCEEECBCSS
T ss_pred CCCCCCCCCcCccccccccccCC
Confidence 34899999999988887766543
No 277
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=21.36 E-value=31 Score=23.22 Aligned_cols=12 Identities=17% Similarity=0.398 Sum_probs=11.0
Q ss_pred eeEeCCCCcccc
Q psy15340 55 DLECPESGRKFP 66 (81)
Q Consensus 55 ~L~C~~c~~~yp 66 (81)
.-+|+.||..|.
T Consensus 155 ~~~C~~CG~~~~ 166 (191)
T 1lko_A 155 KWRCRNCGYVHE 166 (191)
T ss_dssp EEEETTTCCEEE
T ss_pred eEEECCCCCEee
Confidence 789999999986
No 278
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=21.34 E-value=31 Score=19.05 Aligned_cols=16 Identities=25% Similarity=0.468 Sum_probs=12.0
Q ss_pred cceeEeCCCCcccccc
Q psy15340 53 EGDLECPESGRKFPIS 68 (81)
Q Consensus 53 eg~L~C~~c~~~ypI~ 68 (81)
+....|+.|++.|.-.
T Consensus 73 ~~~~~C~~C~~~f~~~ 88 (100)
T 2ebt_A 73 AKPFQCGVCNRSFSRS 88 (100)
T ss_dssp CCSCBCSSSCCBCSSH
T ss_pred CCCeECCCCcCccCCH
Confidence 4568899999988643
No 279
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.32 E-value=43 Score=17.39 Aligned_cols=11 Identities=18% Similarity=0.452 Sum_probs=5.9
Q ss_pred eEeCCCCcccc
Q psy15340 56 LECPESGRKFP 66 (81)
Q Consensus 56 L~C~~c~~~yp 66 (81)
..|+.|++.|.
T Consensus 11 ~~C~~C~k~f~ 21 (66)
T 2eod_A 11 QPCTYCTKEFV 21 (66)
T ss_dssp EECSSSCCEEE
T ss_pred eeccccCCccC
Confidence 45555555554
No 280
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=21.11 E-value=35 Score=19.70 Aligned_cols=21 Identities=14% Similarity=-0.126 Sum_probs=16.5
Q ss_pred eeEeCCCCccccccCCccccC
Q psy15340 55 DLECPESGRKFPISSGIPNML 75 (81)
Q Consensus 55 ~L~C~~c~~~ypI~dGIP~ml 75 (81)
.-.||.|+..+...+=+||..
T Consensus 48 ~~~cP~~~~~l~~~~l~pn~~ 68 (85)
T 2kr4_A 48 SPTDPFNRQMLTESMLEPVPE 68 (85)
T ss_dssp CSBCTTTCCBCCGGGCEECHH
T ss_pred CCCCCCCcCCCChHhcchHHH
Confidence 358999999998887777643
No 281
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=20.87 E-value=39 Score=21.47 Aligned_cols=12 Identities=25% Similarity=0.537 Sum_probs=10.1
Q ss_pred ceeEeCCCCccc
Q psy15340 54 GDLECPESGRKF 65 (81)
Q Consensus 54 g~L~C~~c~~~y 65 (81)
-.-.|..||..|
T Consensus 66 ~p~~C~~CG~~F 77 (105)
T 2gmg_A 66 KPAQCRKCGFVF 77 (105)
T ss_dssp CCCBBTTTCCBC
T ss_pred ECcChhhCcCee
Confidence 345799999999
No 282
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=20.50 E-value=34 Score=17.41 Aligned_cols=13 Identities=15% Similarity=0.332 Sum_probs=9.4
Q ss_pred eeEeCCCCccccc
Q psy15340 55 DLECPESGRKFPI 67 (81)
Q Consensus 55 ~L~C~~c~~~ypI 67 (81)
.-.||.|+..++|
T Consensus 43 ~~~CP~Cr~~~~v 55 (55)
T 1iym_A 43 HSTCPLCRLTVVV 55 (55)
T ss_dssp CCSCSSSCCCSCC
T ss_pred CCcCcCCCCEeEC
Confidence 4578888887764
No 283
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=20.49 E-value=37 Score=23.54 Aligned_cols=25 Identities=12% Similarity=0.351 Sum_probs=18.4
Q ss_pred hhceeeeeccceeEeCCCCcccccc
Q psy15340 44 HALLEVEVVEGDLECPESGRKFPIS 68 (81)
Q Consensus 44 ~~ll~~~v~eg~L~C~~c~~~ypI~ 68 (81)
.-+++.+-.-..+.|..|++.|+..
T Consensus 110 ~~v~elHG~~~~~~C~~C~~~~~~~ 134 (246)
T 1yc5_A 110 KKVIELHGNVEEYYCVRCEKKYTVE 134 (246)
T ss_dssp SCEEETTEEEEEEEETTTCCEEEHH
T ss_pred CcEEEecCccceeEcCCCCCCCcHH
Confidence 3455555566688999999999864
No 284
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=20.45 E-value=41 Score=19.16 Aligned_cols=17 Identities=18% Similarity=0.270 Sum_probs=12.8
Q ss_pred ccceeEeCCCCcccccc
Q psy15340 52 VEGDLECPESGRKFPIS 68 (81)
Q Consensus 52 ~eg~L~C~~c~~~ypI~ 68 (81)
.+....|+.|++.|.-.
T Consensus 63 ~~~~~~C~~C~~~f~~~ 79 (124)
T 2dlq_A 63 SEQVFTCSVCQETFRRR 79 (124)
T ss_dssp CCCCEECSSSCCEESSH
T ss_pred CCCCeECCCCCCccCCH
Confidence 45678899999888644
No 285
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=20.40 E-value=38 Score=18.39 Aligned_cols=13 Identities=23% Similarity=0.598 Sum_probs=8.7
Q ss_pred eeEeCCCCccccc
Q psy15340 55 DLECPESGRKFPI 67 (81)
Q Consensus 55 ~L~C~~c~~~ypI 67 (81)
-.+|..||+.|.+
T Consensus 37 Fy~C~~Cg~~w~~ 49 (50)
T 1tfi_A 37 FVVCNECGNRWKF 49 (50)
T ss_dssp EEEESSSCCEEEC
T ss_pred EEEcCCCCCeEEe
Confidence 3567778777653
No 286
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=20.23 E-value=35 Score=19.14 Aligned_cols=14 Identities=29% Similarity=0.593 Sum_probs=9.8
Q ss_pred ceeEeCCCCccccc
Q psy15340 54 GDLECPESGRKFPI 67 (81)
Q Consensus 54 g~L~C~~c~~~ypI 67 (81)
....|+.|++.|.-
T Consensus 16 ~~~~C~~C~~~f~~ 29 (106)
T 2ee8_A 16 KEFICKFCGRHFTK 29 (106)
T ss_dssp CCCBCSSSCCBCSS
T ss_pred cCeECCCCCCccCC
Confidence 34678888887754
No 287
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=20.03 E-value=34 Score=20.64 Aligned_cols=12 Identities=33% Similarity=0.811 Sum_probs=8.6
Q ss_pred eeEeCCCCcccc
Q psy15340 55 DLECPESGRKFP 66 (81)
Q Consensus 55 ~L~C~~c~~~yp 66 (81)
.=.||-||....
T Consensus 47 g~~CPvCgs~l~ 58 (112)
T 1l8d_A 47 KGKCPVCGRELT 58 (112)
T ss_dssp SEECTTTCCEEC
T ss_pred CCCCCCCCCcCC
Confidence 337999998543
Done!