RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15353
(344 letters)
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 183 bits (464), Expect = 8e-57
Identities = 105/259 (40%), Positives = 138/259 (53%), Gaps = 8/259 (3%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
P FDAREQWP C TI + D G+C + F AV A SDR CI + + +S E + +
Sbjct: 3 PASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLT 62
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
CC C+ G WNF ++G V+GG Y GC+P +I PC HH + P
Sbjct: 63 CC---GSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPP 119
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
PK C C P Y + QDKH +Y V ++E I EI +GP F+
Sbjct: 120 CTGEGDTPK--CSKIC-EPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFS 176
Query: 265 LYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKI 324
+Y DF YKSGVY+H + + H+ +++GWG ENGTPYWLV N+W WGD G KI
Sbjct: 177 VYSDFLLYKSGVYQHVTGEMMGG--HAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKI 234
Query: 325 LRGKYECAFEYLIAAGKPK 343
LRG+ C E + AG P+
Sbjct: 235 LRGQDHCGIESEVVAGIPR 253
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 113 bits (283), Expect = 2e-30
Identities = 62/264 (23%), Positives = 93/264 (35%), Gaps = 42/264 (15%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
P +D R + V + +C + + FA++G R I + Q LS + V S
Sbjct: 2 PTSWDWRNVH-GINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVS 60
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
C + G + + + +
Sbjct: 61 CSQYA------QGCEGGFPYLIAGKYAQDFGL---------VEEACFPYTGTDSPCKMKE 105
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
C + NE +K E++ HGP F
Sbjct: 106 DCFRYYSSEYHYVGGFYGGC--------------------NEALMKLELVHHGPMAVAFE 145
Query: 265 LYDDFYHYKSGVYKHTSNAKLEN----YLHSGKLIGWGTE--NGTPYWLVINTWGPHWGD 318
+YDDF HYK G+Y HT N H+ L+G+GT+ +G YW+V N+WG WG+
Sbjct: 146 VYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGE 205
Query: 319 RGTVKILRGKYECAFEYLIAAGKP 342
G +I RG ECA E + A P
Sbjct: 206 NGYFRIRRGTDECAIESIAVAATP 229
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 109 bits (272), Expect = 2e-28
Identities = 58/277 (20%), Positives = 92/277 (33%), Gaps = 41/277 (14%)
Query: 67 RPLPGDR------KTYDPEYS----ATVPDRFDAREQW--PNCGTIGHVPDTGACAAPHI 114
RPL GD TY + A +P +D R + C +
Sbjct: 7 RPLRGDGLAPLGRTTYPRPHEYLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWA 66
Query: 115 FAAVGAFSDRRCIKSKGQQNRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGS 174
A+ A +DR IK KG L + C C G+ W++ H+ G
Sbjct: 67 HASTSAMADRINIKRKGAWPSTLLSVQNVIDCGNAGS-----CEGGNDLSVWDYAHQHGI 121
Query: 175 VTGGDYGDRTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKH 234
E ++ ++ +T YG
Sbjct: 122 PDETCN-------NYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYG-------- 166
Query: 235 RTTLTYWVDDNEDAIKKEILAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKL 294
+ + EI A+GP + + +Y G+Y + N H +
Sbjct: 167 -------SLSGREKMMAEIYANGPISCGIMATERLANYTGGIYAEYQDTTYIN--HVVSV 217
Query: 295 IGWGTENGTPYWLVINTWGPHWGDRGTVKILRGKYEC 331
GWG +GT YW+V N+WG WG+RG ++I+ Y+
Sbjct: 218 AGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKD 254
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 106 bits (264), Expect = 9e-28
Identities = 55/264 (20%), Positives = 93/264 (35%), Gaps = 43/264 (16%)
Query: 81 SATVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTE 140
SAT P D R++ + V + G+C + F+ GA I + + + +
Sbjct: 6 SATYPPSMDWRKKGN---FVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSL--AEQ 60
Query: 141 YVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSA 200
+ C + N C G + + ++ + G D G
Sbjct: 61 QLVDCAQNFN---NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAI-- 115
Query: 201 PTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTT 260
+ ++E+A+ + + + P +
Sbjct: 116 --------------------------------AFVKDVANITMNDEEAMVEAVALYNPVS 143
Query: 261 ATFALYDDFYHYKSGVYKHTSNAK-LENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDR 319
F + +DF Y+ G+Y TS K + H+ +G+G ENG PYW+V N+WGP WG
Sbjct: 144 FAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMN 203
Query: 320 GTVKILRGKYECAFEYLIAAGKPK 343
G I RGK C + P
Sbjct: 204 GYFLIERGKNMCGLAACASYPIPL 227
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 103 bits (256), Expect = 1e-26
Identities = 40/247 (16%), Positives = 74/247 (29%), Gaps = 46/247 (18%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
P +D W + G + V D G C + F+ G + + + LS + +
Sbjct: 2 PPEWD----WRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLS--LSEQELLD 55
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
C +K+C G ++ + G + D G S
Sbjct: 56 CD-----KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCQFSAEKA------- 103
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
K + + NE + + GP +
Sbjct: 104 ----------------------------KVYIQDSVELSQNEQKLAAWLAKRGPISVAIN 135
Query: 265 LYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKI 324
+ ++ H+ L+G+G + P+W + N+WG WG++G +
Sbjct: 136 AFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYL 195
Query: 325 LRGKYEC 331
RG C
Sbjct: 196 HRGSGAC 202
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 100 bits (248), Expect = 2e-25
Identities = 50/250 (20%), Positives = 85/250 (34%), Gaps = 47/250 (18%)
Query: 83 TVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYV 142
TVP D W G + V D G C + F+ + A IK+ + S + +
Sbjct: 1 TVPASVD----WRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSL--SEQEL 54
Query: 143 ASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPT 202
C N G G T
Sbjct: 55 VDCDTDQNQGCN-----------------------------GGLMDYAFEFIKQRGGITT 85
Query: 203 LPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTAT 262
+ + ++ P + +++E+A+ K + + A
Sbjct: 86 EANYPYEAYDGTCDVSKENAPAVSIDGHE--------NVPENDENALLKAVANQPVSVAI 137
Query: 263 FALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTE-NGTPYWLVINTWGPHWGDRGT 321
A DF Y GV+ + +L+ H ++G+GT +GT YW V N+WGP WG++G
Sbjct: 138 DAGGSDFQFYSEGVFTGSCGTELD---HGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGY 194
Query: 322 VKILRGKYEC 331
+++ RG +
Sbjct: 195 IRMERGISDK 204
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 95.8 bits (237), Expect = 1e-23
Identities = 38/265 (14%), Positives = 83/265 (31%), Gaps = 61/265 (23%)
Query: 74 KTYDPEYSATVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQ 133
K Y E + +D W + V D C + F+++G+ + I+
Sbjct: 9 KKYRGEENF-DHAAYD----WRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLI 63
Query: 134 NRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISP 193
LS + + C + ++
Sbjct: 64 T--LSEQELVDCSFKNYGCNGGLINNAFEDMIELGGICPD-------------------- 101
Query: 194 CSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEI 253
+ ++ + + + ++ ++ +K+ +
Sbjct: 102 ---------------------GDYPYVSDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEAL 140
Query: 254 LAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGT---------- 303
GP + + A+ DDF YK G++ +L H+ L+G+G +
Sbjct: 141 RFLGPISISVAVSDDFAFYKEGIFDGECGDQLN---HAVMLVGFGMKEIVNPLTKKGEKH 197
Query: 304 PYWLVINTWGPHWGDRGTVKILRGK 328
Y+++ N+WG WG+RG + I +
Sbjct: 198 YYYIIKNSWGQQWGERGFINIETDE 222
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 97.0 bits (240), Expect = 1e-23
Identities = 59/323 (18%), Positives = 109/323 (33%), Gaps = 61/323 (18%)
Query: 15 RGELYKFSDAYIDQINREA----NTWTAGRNFPANLSEEYLRQFLIADAKYFDQSDRPLP 70
R +++ + I+ N+E +++T N +++ E RQ + P
Sbjct: 31 RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQ-------VMNGFQNRKP 83
Query: 71 GDRKTYDPEYSATVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSK 130
K + P D W G + V + G C + F+A GA + K+
Sbjct: 84 RKGKVFQEPLFYEAPRSVD----WREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTG 139
Query: 131 GQQNRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPST 190
+ LS + + C N+ C+ G + + ++ G + + + S
Sbjct: 140 --RLISLSEQNLVDCSGPQG---NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESC 194
Query: 191 ISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIK 250
+ + E A+
Sbjct: 195 KYNPKYS-----------------------------------VANDAGFVDIPKQEKALM 219
Query: 251 KEILAHGPTTATF-ALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTE----NGTPY 305
K + GP + A ++ F YK G+Y + E+ H ++G+G E + Y
Sbjct: 220 KAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSS-EDMDHGVLVVGYGFESTESDNNKY 278
Query: 306 WLVINTWGPHWGDRGTVKILRGK 328
WLV N+WG WG G VK+ + +
Sbjct: 279 WLVKNSWGEEWGMGGYVKMAKDR 301
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 93.5 bits (231), Expect = 4e-23
Identities = 52/249 (20%), Positives = 86/249 (34%), Gaps = 49/249 (19%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
P D W G + V + C + F+A GA + K+ + LS + +
Sbjct: 2 PKSVD----WRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTG--KLVSLSEQNLVD 55
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
C + N+ C+ G + R + ++ + G + + +
Sbjct: 56 CSRPQG---NQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENS------- 105
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGP-TTATF 263
T T E A+ K + GP + A
Sbjct: 106 ---------------------------VAQDTGFTVVAPGKEKALMKAVATVGPISVAMD 138
Query: 264 ALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGW----GTENGTPYWLVINTWGPHWGDR 319
A + F YKSG+Y + +N H ++G+ + + YWLV N+WGP WG
Sbjct: 139 AGHSSFQFYKSGIYFEPDCSS-KNLDHGVLVVGYGFEGANSDNSKYWLVKNSWGPEWGSN 197
Query: 320 GTVKILRGK 328
G VKI + K
Sbjct: 198 GYVKIAKDK 206
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 92.4 bits (228), Expect = 1e-22
Identities = 47/245 (19%), Positives = 83/245 (33%), Gaps = 45/245 (18%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
P D W + G + + G C F+A+ I + + LS + +
Sbjct: 2 PSYVD----WRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLIS--LSEQELID 55
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
C + + C+ G + + F+ G + + T +
Sbjct: 56 CGRTQN---TRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNE------- 105
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
K T T +NE A++ + + A A
Sbjct: 106 ----------KYVTIDTY----------------ENVPYNNEWALQTAVTYQPVSVALDA 139
Query: 265 LYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKI 324
D F Y SG++ ++ H+ ++G+GTE G YW+V N+W WG+ G ++I
Sbjct: 140 AGDAFKQYSSGIFTGPCGTAID---HAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRI 196
Query: 325 LRGKY 329
LR
Sbjct: 197 LRNVG 201
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 90.4 bits (223), Expect = 5e-22
Identities = 51/245 (20%), Positives = 84/245 (34%), Gaps = 45/245 (18%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
PD D W G + V G+C A F+AVGA + +K+ + S
Sbjct: 2 PDSVD----WREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCS 57
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
K NK C+ G + + ++ + +
Sbjct: 58 TEKYG----NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRA------ 107
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHG-PTTATF 263
+ T ED +K+ + G +
Sbjct: 108 ----------------------------ATCSKYTELPYGREDVLKEAVANKGPVSVGVD 139
Query: 264 ALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVK 323
A + F+ Y+SGVY S + N H ++G+G NG YWLV N+WG ++G+ G ++
Sbjct: 140 ARHPSFFLYRSGVYYEPSCTQNVN--HGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIR 197
Query: 324 ILRGK 328
+ R K
Sbjct: 198 MARNK 202
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 90.0 bits (222), Expect = 7e-22
Identities = 46/245 (18%), Positives = 75/245 (30%), Gaps = 50/245 (20%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
P D W G + V + GAC + F+ + I + S
Sbjct: 2 PQSID----WRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLEL--------S 49
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
++ D + G T V Q +
Sbjct: 50 EQELVDCDKHSYGCKGGYQTTSLQYVANNGVHTSKVYPYQAKQYKCRATDKPG------- 102
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGP-TTATF 263
K + T V N + LA+ P +
Sbjct: 103 ---------------------------PKVKITGYKRVPSNCETSFLGALANQPLSVLVE 135
Query: 264 ALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVK 323
A F YKSGV+ KL+ H+ +G+GT +G Y ++ N+WGP+WG++G ++
Sbjct: 136 AGGKPFQLYKSGVFDGPCGTKLD---HAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMR 192
Query: 324 ILRGK 328
+ R
Sbjct: 193 LKRQS 197
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 89.7 bits (221), Expect = 1e-21
Identities = 47/254 (18%), Positives = 83/254 (32%), Gaps = 48/254 (18%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
PD D W G + V + G C + F+ V A I + + S + +
Sbjct: 2 PDSID----WRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISL--SEQQLVD 55
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
C C G + + F+ G + + G S
Sbjct: 56 CTTANH-----GCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICNSTV---------- 100
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
+ +Y NE +++K + + A
Sbjct: 101 -----------NAPVVSIDSY-------------ENVPSHNEQSLQKAVANQPVSVTMDA 136
Query: 265 LYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKI 324
DF Y+SG++ + N H+ ++G+GTEN +W+V N+WG +WG+ G ++
Sbjct: 137 AGRDFQLYRSGIFTGSCNISAN---HALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRA 193
Query: 325 LRGKYECAFEYLIA 338
R + I
Sbjct: 194 ERNIENPDGKCGIT 207
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 88.9 bits (219), Expect = 2e-21
Identities = 46/244 (18%), Positives = 78/244 (31%), Gaps = 48/244 (19%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
P+ D W G + V G+C + F+AV I++ LS + +
Sbjct: 2 PENVD----WRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVE--LSEQEL-- 53
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
+ + C G ++ K G Y P
Sbjct: 54 ---VDCERRSHGCKGGYPPYALEYVAKNGIHLRSKY-----------------------P 87
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
Q + K T G G +NE + I + +
Sbjct: 88 YKAKQGTCRAKQVGGPIVKTSGVG-----------RVQPNNEGNLLNAIAKQPVSVVVES 136
Query: 265 LYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKI 324
F YK G+++ K++ H+ +G+G G Y L+ N+WG WG++G ++I
Sbjct: 137 KGRPFQLYKGGIFEGPCGTKVD---HAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRI 193
Query: 325 LRGK 328
R
Sbjct: 194 KRAP 197
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 86.6 bits (213), Expect = 5e-20
Identities = 38/304 (12%), Positives = 76/304 (25%), Gaps = 46/304 (15%)
Query: 31 REANTWTAGRNFPANLSEEYLRQFLIADAKYFDQSDRPLPGDRKTYDPEYSATVPDRFDA 90
+ + N ++LS + + + A+ F+ + +T + P D
Sbjct: 34 KYVQSNGGAINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSINGNAPAEIDL 93
Query: 91 REQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVASCCKICR 150
R+ A F+ V A Q+ L+ + + C
Sbjct: 94 RQMRTVTPIRMQGGCGSA----WAFSGVAATESAYLAYRD--QSLDLAEQELVDCASQHG 147
Query: 151 YDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLPSCENQK 210
C ++ R ++ G V Y Q
Sbjct: 148 ------CHGDTIPRGIEYIQHNGVVQESYYRYVAREQSCRRPNAQRF------------- 188
Query: 211 VPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFALYDDFY 270
C ++ T + L +
Sbjct: 189 ----GISNYCQIYPPNANKIREALAQTHSAIA---------------VIIGIKDLDAFRH 229
Query: 271 HYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKILRGKYE 330
+ + + + + H+ ++G+ G YW+V N+W +WGD G
Sbjct: 230 YDGRTIIQRDNGYQPNY--HAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDL 287
Query: 331 CAFE 334
E
Sbjct: 288 MMIE 291
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 83.9 bits (206), Expect = 1e-19
Identities = 38/250 (15%), Positives = 68/250 (27%), Gaps = 45/250 (18%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
P D W G + V D G C + F+A+G + + N
Sbjct: 2 PAAVD----WRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLS-----EQM 52
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
+ D S + W G+V D + + + +
Sbjct: 53 LVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTV---- 108
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
T + +E I + +GP
Sbjct: 109 ----------------------------GATITGHVELPQDEAQIAAWLAVNGPVAVAVD 140
Query: 265 LYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKI 324
+ + S H L+G+ PYW++ N+W WG+ G ++I
Sbjct: 141 ASSWMTYTGGVMTSCVSE----QLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRI 196
Query: 325 LRGKYECAFE 334
+G +C +
Sbjct: 197 AKGSNQCLVK 206
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 83.5 bits (205), Expect = 2e-19
Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 49/254 (19%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
P D W + G + + + C + F+AV A I++ Q LS + +
Sbjct: 2 PSFVD----WRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTG--QLISLSEQELVD 55
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
C + + ++ G + + Q S
Sbjct: 56 CDTASHGCNGGWM-----NNAFQYIITNGGIDTQQNYPYSAVQGSCKPYRLRVV------ 104
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
+NE A++ + + + A
Sbjct: 105 -----------------------------SINGFQRVTRNNESALQSAVASQPVSVTVEA 135
Query: 265 LYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKI 324
F HY SG++ + + ++G+GT++G YW+V N+WG +WG++G + +
Sbjct: 136 AGAPFQHYSSGIFTGPCGTAQNHGV---VIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWM 192
Query: 325 LRGKYECAFEYLIA 338
R A IA
Sbjct: 193 ERNVASSAGLCGIA 206
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 82.0 bits (201), Expect = 5e-19
Identities = 45/244 (18%), Positives = 83/244 (34%), Gaps = 45/244 (18%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
PD D R++ G + V + G C + F++VGA + K+ N LS + +
Sbjct: 2 PDSVDYRKK----GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLN--LSPQNLVD 55
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
C C G + + ++ K + + P +
Sbjct: 56 CVSENDG-----CGGGYMTNAFQYVQKNRGID-------------------SEDAYPYVG 91
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
E+ +C + + + + A A
Sbjct: 92 QEESCMYNPTGKAAKCRGYRE--------------IPEGNEKALKRAVARVGPVSVAIDA 137
Query: 265 LYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKI 324
F Y GVY S +N H+ +G+G + G +W++ N+WG +WG++G + +
Sbjct: 138 SLTSFQFYSKGVYYDESCNS-DNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILM 196
Query: 325 LRGK 328
R K
Sbjct: 197 ARNK 200
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 74.7 bits (182), Expect = 2e-16
Identities = 43/245 (17%), Positives = 77/245 (31%), Gaps = 52/245 (21%)
Query: 84 VPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVA 143
+P+ D W G + V + G+C + F+AV I++ S + +
Sbjct: 1 IPEYVD----WRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNE--YSEQELL 54
Query: 144 SCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTL 203
C + +G + L + + + G Q S +A
Sbjct: 55 DCDRRSY------GCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAA--- 105
Query: 204 PSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATF 263
+ NE A+ I +
Sbjct: 106 ------------------------------KTDGVRQVQPYNEGALLYSIANQPVSVVLE 135
Query: 264 ALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVK 323
A DF Y+ G++ K++ H+ +G+G Y L+ N+WG WG+ G ++
Sbjct: 136 AAGKDFQLYRGGIFVGPCGNKVD---HAVAAVGYGPN----YILIKNSWGTGWGENGYIR 188
Query: 324 ILRGK 328
I RG
Sbjct: 189 IKRGT 193
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 71.9 bits (175), Expect = 2e-15
Identities = 43/243 (17%), Positives = 75/243 (30%), Gaps = 54/243 (22%)
Query: 85 PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
P++ D W G + V + G+C + F+ V I++ LS + +
Sbjct: 2 PEQID----WRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTG--NLISLSEQELVD 55
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
C K + + N
Sbjct: 56 CDKKNHGCLGGAFVFAYQYIINNGGI-------------------------------DTQ 84
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
+ K + C + NE A+K+ + T A A
Sbjct: 85 ANYPYKAVQGPCQAASKVVSI----------DGYNGVPFCNEXALKQAVAVQPSTVAIDA 134
Query: 265 LYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKI 324
F Y SG++ KL H ++G+ YW+V N+WG +WG++G +++
Sbjct: 135 SSAQFQQYSSGIFSGPCGTKLN---HGVTIVGYQAN----YWIVRNSWGRYWGEKGYIRM 187
Query: 325 LRG 327
LR
Sbjct: 188 LRV 190
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast
(Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Length = 458
Score = 29.9 bits (67), Expect = 0.41
Identities = 6/20 (30%), Positives = 8/20 (40%)
Query: 301 NGTPYWLVINTWGPHWGDRG 320
+ V N+WG G G
Sbjct: 388 KLPLRYRVENSWGKDSGKDG 407
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus
chinensis) [TaxId: 4843]}
Length = 325
Score = 29.5 bits (65), Expect = 0.56
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Query: 138 STEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYG-DRTGCQPSTISPCSH 196
ST +YD N+S ++ + RTW+ + GS G D I +
Sbjct: 45 STLCTNCGSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQTI 104
Query: 197 HGSAPTLPSCENQK 210
+ S +
Sbjct: 105 ELAKREAASFASGP 118
>d1sgva2 d.265.1.2 (A:3-235) Pseudouridine synthase II TruB
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 233
Score = 28.6 bits (63), Expect = 0.93
Identities = 8/50 (16%), Positives = 16/50 (32%)
Query: 183 RTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQD 232
R G + L + ++ + C++ TY R +D
Sbjct: 134 RQGRSVQLEARPIRIDRFELLAARRRDQLIDIDVEIDCSSGTYIRALARD 183
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 453
Score = 27.6 bits (61), Expect = 2.3
Identities = 8/22 (36%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Query: 300 ENGTP-YWLVINTWGPHWGDRG 320
++G W V N+WG G +G
Sbjct: 384 QDGAFTKWRVENSWGEDHGHKG 405
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]}
Length = 357
Score = 27.6 bits (60), Expect = 2.3
Identities = 8/49 (16%), Positives = 15/49 (30%)
Query: 144 SCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTIS 192
C +D + S + N + G G + D +T+
Sbjct: 52 GCVGKRFFDPSSSSTFKETDYNLNITYGTGGANGIYFRDSITVGGATVK 100
>d1y08a_ d.3.1.12 (A:) IgG-specific endopeptidase IdeS (Sib38)
{Streptococcus pyogenes [TaxId: 1314]}
Length = 291
Score = 27.3 bits (60), Expect = 3.1
Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 237 TLTYWVDDNEDAIKKEILAHGPTTATFALYDDFYHYKSGV--YKHTSNAKLENYLHSGKL 294
L +W D N+D IK+ + H + + K + H ++KL Y
Sbjct: 54 MLHWWFDQNKDQIKRYLEEHPEKQKINFNGEQMFDVKEAIDTKNHQLDSKLFEYFKEKAF 113
Query: 295 IGWGTENG 302
T++
Sbjct: 114 PYLSTKHL 121
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus)
[TaxId: 9913]}
Length = 323
Score = 26.9 bits (58), Expect = 3.3
Identities = 10/56 (17%), Positives = 20/56 (35%)
Query: 144 SCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGS 199
+C R+D KS + ++ + + + GS+ G D + S
Sbjct: 51 ACKNHQRFDPRKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLS 106
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua)
[TaxId: 8049]}
Length = 324
Score = 26.1 bits (56), Expect = 7.3
Identities = 6/52 (11%), Positives = 17/52 (32%)
Query: 144 SCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCS 195
+C ++ +S ++ +T + + G + G D +
Sbjct: 49 ACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMRGILGQDTVSVGGGSDPNQE 100
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 335
Score = 25.7 bits (55), Expect = 8.0
Identities = 9/50 (18%), Positives = 17/50 (34%)
Query: 144 SCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISP 193
+C Y+ + S S+ + + G V G D T++
Sbjct: 54 ACGIHSLYESSDSSSYMENGDDFTIHYGSGRVKGFLSQDSVTVGGITVTQ 103
>d1k4ia_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate
synthase, DHBP synthase, RibB {Magnaporthe grisea
[TaxId: 148305]}
Length = 216
Score = 25.8 bits (56), Expect = 8.4
Identities = 16/93 (17%), Positives = 21/93 (22%), Gaps = 2/93 (2%)
Query: 252 EILAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGW-GTENGTPYWLVIN 310
L A + S +H S + + P
Sbjct: 64 TALDLPQMVTHNADPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRP 123
Query: 311 -TWGPHWGDRGTVKILRGKYECAFEYLIAAGKP 342
P G V+ RG E E AGK
Sbjct: 124 GHVFPLRAVAGGVRARRGHTEAGVELCRLAGKR 156
>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic
enzyme {Human (Homo sapiens) [TaxId: 9606]}
Length = 294
Score = 25.7 bits (56), Expect = 8.4
Identities = 7/24 (29%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Query: 72 DRKTYDPEYSATVPDRFDAREQWP 95
+T+ EY + +PD ++ WP
Sbjct: 275 KERTWRSEYDSLLPDVYE----WP 294
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 25.3 bits (54), Expect = 8.9
Identities = 17/151 (11%), Positives = 41/151 (27%), Gaps = 3/151 (1%)
Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
C I R S G + R + PS ++ +
Sbjct: 23 CANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVT---VKLLKNAID 79
Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
+ + + N +D T + D E+ + + +L G ++
Sbjct: 80 ANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMTQRLLKRGESSGRSD 139
Query: 265 LYDDFYHYKSGVYKHTSNAKLENYLHSGKLI 295
+ + + + +++Y K+
Sbjct: 140 DNIESIKKRFNTFNVQTKLVIDHYNKFDKVK 170
>d1b48a1 a.45.1.1 (A:80-222) Class alpha GST {Mouse (Mus musculus),
(a1-4) [TaxId: 10090]}
Length = 143
Score = 25.1 bits (54), Expect = 9.2
Identities = 7/62 (11%), Positives = 18/62 (29%), Gaps = 4/62 (6%)
Query: 94 WPNCGTIGHVPDTGACAAPHIFAAVGAFSDR----RCIKSKGQQNRPLSTEYVASCCKIC 149
+ + P + A S+ + ++ Q+ P YV +
Sbjct: 82 LEAILMVEELSAPVLSDFPLLQAFKTRISNIPTIKKFLQPGSQRKPPPDGPYVEVVRIVL 141
Query: 150 RY 151
++
Sbjct: 142 KF 143
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.137 0.455
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,416,287
Number of extensions: 68725
Number of successful extensions: 261
Number of sequences better than 10.0: 1
Number of HSP's gapped: 238
Number of HSP's successfully gapped: 57
Length of query: 344
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 258
Effective length of database: 1,226,816
Effective search space: 316518528
Effective search space used: 316518528
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.9 bits)