Query psy15354
Match_columns 218
No_of_seqs 208 out of 362
Neff 5.2
Searched_HMMs 13730
Date Fri Aug 16 18:46:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15354.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15354hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1mn3a_ a.5.2.4 (A:) Vacuolar 97.8 2.1E-05 1.5E-09 52.4 5.4 41 120-160 11-51 (54)
2 d1wgla_ a.5.2.4 (A:) Toll-inte 97.7 2.7E-05 2E-09 52.7 5.2 40 123-162 11-50 (59)
3 d2di0a1 a.5.2.4 (A:8-70) Activ 97.4 0.00015 1.1E-08 49.5 6.3 45 118-162 3-47 (63)
4 d2bwba1 a.5.2.1 (A:328-371) DS 91.7 0.18 1.3E-05 31.5 5.2 40 121-161 5-44 (44)
5 d1wjia_ a.5.2.1 (A:) Tudor dom 91.6 0.23 1.7E-05 32.7 6.0 39 122-162 10-48 (63)
6 d2dnaa1 a.5.2.1 (A:12-61) Ubiq 90.4 0.3 2.2E-05 31.2 5.4 44 118-162 5-48 (50)
7 d1veja1 a.5.2.1 (A:8-68) 49314 84.5 0.78 5.7E-05 30.2 4.8 44 116-160 17-60 (61)
8 d1oqya1 a.5.2.1 (A:160-200) DN 84.2 0.41 3E-05 29.0 3.1 40 119-160 2-41 (41)
9 d2daha1 a.5.2.1 (A:8-48) Ubiqu 81.0 1.2 8.8E-05 27.0 4.4 37 123-160 4-40 (41)
10 d1vg5a_ a.5.2.1 (A:) Rhomboid 75.6 2.3 0.00017 28.4 5.0 40 121-162 29-68 (73)
11 d1wiva_ a.5.2.1 (A:) Ubiquitin 73.4 3.3 0.00024 27.6 5.3 39 122-162 30-68 (73)
12 d1wgna_ a.5.2.1 (A:) Ubiquitin 72.4 2.4 0.00018 27.6 4.3 40 121-162 19-58 (63)
13 d1otra_ a.5.2.4 (A:) Protein C 72.1 4.2 0.0003 24.8 5.0 36 125-160 8-43 (49)
14 d1ufza_ a.5.9.1 (A:) HBS1-like 72.0 4.4 0.00032 28.0 5.8 50 117-166 30-80 (83)
15 d1whca_ a.5.2.1 (A:) UBA/UBX 3 61.9 9.5 0.0007 24.5 5.7 38 123-162 11-49 (64)
16 d1wj7a1 a.5.2.1 (A:8-98) Ubiqu 60.2 12 0.00085 26.1 6.2 45 117-162 28-72 (91)
17 d1pdnc_ a.4.1.5 (C:) Paired pr 50.7 29 0.0021 24.4 7.3 76 78-159 36-123 (123)
18 d1iuqa_ c.112.1.1 (A:) Glycero 44.0 5.5 0.0004 34.1 2.6 25 24-48 211-235 (367)
19 d1wxqa2 d.15.10.2 (A:320-395) 37.3 9.6 0.0007 25.4 2.5 43 39-84 1-47 (76)
20 d1tuba1 c.32.1.1 (A:1-245) Tub 35.9 6.3 0.00046 31.8 1.5 31 3-36 100-130 (245)
21 d1wjoa_ a.40.1.1 (A:) Fimbrin 34.9 32 0.0024 24.0 5.3 81 20-102 8-101 (124)
22 d1tubb1 c.32.1.1 (B:1-245) Tub 29.8 5.1 0.00037 32.2 -0.1 31 3-36 98-128 (243)
23 d1veka_ a.5.2.1 (A:) Ubiquitin 29.6 72 0.0052 21.1 6.4 39 122-162 30-69 (84)
24 d1vkua_ a.28.1.1 (A:) Acyl car 29.3 43 0.0031 21.2 4.8 71 70-159 7-78 (85)
25 d2cpwa1 a.5.2.1 (A:8-58) Cbl-i 26.5 64 0.0047 19.5 5.0 34 125-160 16-50 (51)
26 d1uf5a_ d.160.1.2 (A:) N-carba 26.0 22 0.0016 27.6 3.3 29 20-48 19-50 (303)
27 d2btoa1 c.32.1.1 (A:3-246) Tub 21.2 7.9 0.00057 31.0 -0.5 32 2-36 99-130 (244)
28 d2g3qa1 a.5.2.1 (A:1339-1381) 21.1 53 0.0039 19.6 3.5 36 124-161 7-42 (43)
29 d1qd1a1 d.58.34.1 (A:2-180) Fo 20.8 37 0.0027 26.0 3.6 71 20-93 14-127 (179)
No 1
>d1mn3a_ a.5.2.4 (A:) Vacuolar protein sorting-associated protein vps9 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.75 E-value=2.1e-05 Score=52.41 Aligned_cols=41 Identities=12% Similarity=0.203 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhc
Q psy15354 120 RMYAEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIA 160 (218)
Q Consensus 120 ~~~~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~ 160 (218)
+....++++++|||++..++|..=|.-|.|+|+.||+-+|+
T Consensus 11 e~~e~~~~Lk~MFP~~D~~VI~~VL~a~~G~vd~aidaLL~ 51 (54)
T d1mn3a_ 11 ERKDTLNTLQNMFPDMDPSLIEDVCIAKKSRIEPCVDALLS 51 (54)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHHSCSSCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 46778899999999999999999999999999999999985
No 2
>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.69 E-value=2.7e-05 Score=52.75 Aligned_cols=40 Identities=25% Similarity=0.474 Sum_probs=37.3
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhcCC
Q psy15354 123 AEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIADS 162 (218)
Q Consensus 123 ~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~Gr 162 (218)
..++++++|||++...+|..=|..+.|+|+.+|+-+|+=.
T Consensus 11 e~i~~LkeMFP~~D~~vI~~VL~a~~G~vd~aid~LL~Ms 50 (59)
T d1wgla_ 11 EDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMG 50 (59)
T ss_dssp HHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHHSS
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Confidence 4588999999999999999999999999999999999854
No 3
>d2di0a1 a.5.2.4 (A:8-70) Activating signal cointegrator 1 complex subunit 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.43 E-value=0.00015 Score=49.53 Aligned_cols=45 Identities=13% Similarity=0.296 Sum_probs=42.5
Q ss_pred chHHHHHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhcCC
Q psy15354 118 DSRMYAEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIADS 162 (218)
Q Consensus 118 ~~~~~~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~Gr 162 (218)
+.++++++.||+++||++...-|..=|..-.+|+|..|..||+|.
T Consensus 3 ~vel~s~I~qV~Dl~PdLG~GFi~~~L~~Y~~n~E~vI~~lLe~~ 47 (63)
T d2di0a1 3 GVELDSLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNILEER 47 (63)
T ss_dssp SHHHHHHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHcCCCcHHHHHHHHHHhCCCHHHHHHHHHccC
Confidence 578999999999999999999999999997789999999999986
No 4
>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.74 E-value=0.18 Score=31.46 Aligned_cols=40 Identities=15% Similarity=0.260 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhcC
Q psy15354 121 MYAEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIAD 161 (218)
Q Consensus 121 ~~~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~G 161 (218)
.....+|.++| =-...+..+..|+.+.|+|++.|+.||.|
T Consensus 5 y~~QL~qL~~M-GF~d~~~Ni~AL~~t~GdV~~Aie~Ll~g 44 (44)
T d2bwba1 5 YEHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLNG 44 (44)
T ss_dssp THHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHHCC
T ss_pred HHHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHhCc
Confidence 34455677776 45678889999999999999999999987
No 5
>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.60 E-value=0.23 Score=32.70 Aligned_cols=39 Identities=18% Similarity=0.212 Sum_probs=35.5
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhcCC
Q psy15354 122 YAEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIADS 162 (218)
Q Consensus 122 ~~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~Gr 162 (218)
..+++++-+| -++.+..+..|..+.++|+..++-||++.
T Consensus 10 ~~~v~~L~~M--GF~~~~a~~AL~~~~~~~e~A~~wL~~~~ 48 (63)
T d1wjia_ 10 EKALKHITEM--GFSKEASRQALMDNGNNLEAALNVLLTSN 48 (63)
T ss_dssp HHHHHHHHTT--TCCHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred HHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence 5678888888 69999999999998889999999999997
No 6
>d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.40 E-value=0.3 Score=31.16 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=36.1
Q ss_pred chHHHHHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhcCC
Q psy15354 118 DSRMYAEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIADS 162 (218)
Q Consensus 118 ~~~~~~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~Gr 162 (218)
..+.....++.++| =-...+..+..|..++|+|++.|+.||++.
T Consensus 5 e~ry~~QL~qL~~M-GF~d~~~Ni~AL~~t~GdV~~Aie~Ll~~~ 48 (50)
T d2dnaa1 5 EVRFSKEMECLQAM-GFVNYNANLQALIATDGDTNAAIYKLKSSQ 48 (50)
T ss_dssp HHHTHHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHc-CCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Confidence 34556666777887 456788899999999999999999999875
No 7
>d1veja1 a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.53 E-value=0.78 Score=30.25 Aligned_cols=44 Identities=16% Similarity=0.225 Sum_probs=36.6
Q ss_pred CCchHHHHHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhc
Q psy15354 116 RYDSRMYAEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIA 160 (218)
Q Consensus 116 ~~~~~~~~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~ 160 (218)
....+.....++.++| =-...+..+..|..+.|+|++.|+.||.
T Consensus 17 ~~e~ry~~QL~qL~eM-GF~d~~~Nl~AL~~t~Gdv~~Aie~Ll~ 60 (61)
T d1veja1 17 FTEGRYQQELEELKAL-GFANRDANLQALVATDGDIHAAIEMLLG 60 (61)
T ss_dssp GTTTTSHHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHc-CCCCHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 3455678888899998 3457888899999999999999999984
No 8
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.20 E-value=0.41 Score=29.04 Aligned_cols=40 Identities=18% Similarity=0.125 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhc
Q psy15354 119 SRMYAEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIA 160 (218)
Q Consensus 119 ~~~~~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~ 160 (218)
+.++.+|.++.+|= ++.+..+..|..+.+||+..++.||+
T Consensus 2 ~~~e~~i~~L~~MG--F~~~~a~~AL~~~~~N~e~A~~~LlS 41 (41)
T d1oqya1 2 SEYETMLTEIMSMG--YERERVVAALRASYNNPHRAVEYLLT 41 (41)
T ss_dssp TTHHHHHHHHHTTT--CCSHHHHHHHHHSCSSTTHHHHTTTT
T ss_pred hhHHHHHHHHHHcC--CCHHHHHHHHHHhCCCHHHHHHHHhC
Confidence 45788999999985 89999999999999999999998874
No 9
>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.98 E-value=1.2 Score=26.99 Aligned_cols=37 Identities=14% Similarity=0.274 Sum_probs=29.2
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhc
Q psy15354 123 AEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIA 160 (218)
Q Consensus 123 ~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~ 160 (218)
+..++.++| --...+.....|....|+|+++||.||+
T Consensus 4 ~QL~~L~~M-GF~d~~~Ni~AL~~t~Gdv~~Aie~Ll~ 40 (41)
T d2daha1 4 VQLEQLRSM-GFLNREANLQALIATGGDVDAAVEKLRQ 40 (41)
T ss_dssp HHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHc-CCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 345666666 3456778888999999999999999985
No 10
>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=75.61 E-value=2.3 Score=28.40 Aligned_cols=40 Identities=10% Similarity=0.155 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhcCC
Q psy15354 121 MYAEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIADS 162 (218)
Q Consensus 121 ~~~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~Gr 162 (218)
-+.+++++.+|= ++.+..+..|..+.|||+..++.||+..
T Consensus 29 ~ee~i~~L~~MG--F~~~~a~~AL~~~~~n~e~A~~~Ll~~~ 68 (73)
T d1vg5a_ 29 SEEQIQKLVAMG--FDRTQVEVALAAADDDLTVAVEILMSQS 68 (73)
T ss_dssp CHHHHHHHHTTT--CCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred CHHHHHHHHHhC--CCHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence 367889999994 7899999999999999999999999864
No 11
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=73.37 E-value=3.3 Score=27.61 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=34.7
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhcCC
Q psy15354 122 YAEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIADS 162 (218)
Q Consensus 122 ~~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~Gr 162 (218)
..++.++-+|= ++....+..|..+.++|+..++.||+..
T Consensus 30 ~~~i~~L~~MG--F~~~~a~~AL~~~~~n~e~Av~~Lls~~ 68 (73)
T d1wiva_ 30 QSSVDTLLSFG--FAEDVARKALKASGGDIEKATDWVFNNS 68 (73)
T ss_dssp HHHHHHHHHHT--CCHHHHHHHHHHTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHHhcC--CCHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 56788888885 8999999999999999999999999874
No 12
>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.45 E-value=2.4 Score=27.57 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhcCC
Q psy15354 121 MYAEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIADS 162 (218)
Q Consensus 121 ~~~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~Gr 162 (218)
-+.+|+++.+| -++.+..+..|+.+.++|+..++.||+..
T Consensus 19 de~~v~~L~~M--GF~~~~a~~AL~~~~~n~e~A~~~Lls~~ 58 (63)
T d1wgna_ 19 ERQCVETVVNM--GYSYECVLRAMKKKGENIEQILDYLFAHS 58 (63)
T ss_dssp HHHHHHHHHHH--HCCHHHHHHHHHHHCSCHHHHHHHHHHHS
T ss_pred hHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 36788999998 46799999999999999999999999854
No 13
>d1otra_ a.5.2.4 (A:) Protein Cue2 (hypothetical protein YKL090W) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=72.13 E-value=4.2 Score=24.78 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=31.3
Q ss_pred HHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhc
Q psy15354 125 AQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIA 160 (218)
Q Consensus 125 ~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~ 160 (218)
..-+-.|||.|+-..+.-.|..|.++.+.||--+|.
T Consensus 8 lsilmdmfpaisksklqvhllennndldltiglllk 43 (49)
T d1otra_ 8 LSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLK 43 (49)
T ss_dssp HHHHHHHCSSSCHHHHHHHHHHTTTCSHHHHHHHHH
T ss_pred HHHHHHHhhhhhhhhheehhhccCCcccceeeeeee
Confidence 345678999999999999999989999999988774
No 14
>d1ufza_ a.5.9.1 (A:) HBS1-like protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.96 E-value=4.4 Score=27.98 Aligned_cols=50 Identities=12% Similarity=0.296 Sum_probs=43.7
Q ss_pred CchHHHHHHHHHHHhCCC-CCHHHHHHHHhhccCCHHHHHHHHhcCCCCCC
Q psy15354 117 YDSRMYAEAQRIREIFPN-IPLNAIVRELGRSHGNAELTISRLIADSSFQN 166 (218)
Q Consensus 117 ~~~~~~~m~~~V~~~fP~-v~~~~I~~DL~~~t~sv~~T~~~iL~Gr~f~p 166 (218)
+..+|.+++++|++|+-. ||...++.-..++.=+|+..++.||+..+.+|
T Consensus 30 d~aRL~SCldqmR~VvGDsvpe~~lv~avlk~dydvekALd~vL~~~~~~p 80 (83)
T d1ufza_ 30 DQARLYSCLDHMREVLGDAVPDDILTEAILKHKFDVQKALSVVLEQDGSGP 80 (83)
T ss_dssp HHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHTTSCHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHcccCCHHHHHHHHHHccCCHHHHHHHHHhccCCCC
Confidence 456899999999999988 99999999999989999999999998653333
No 15
>d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=61.87 E-value=9.5 Score=24.51 Aligned_cols=38 Identities=13% Similarity=0.246 Sum_probs=31.4
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHhhccC-CHHHHHHHHhcCC
Q psy15354 123 AEAQRIREIFPNIPLNAIVRELGRSHG-NAELTISRLIADS 162 (218)
Q Consensus 123 ~m~~~V~~~fP~v~~~~I~~DL~~~t~-sv~~T~~~iL~Gr 162 (218)
.++.++.+| -++.+..++.|..+.+ +|+..++-||+.-
T Consensus 11 ~~l~~L~~M--GF~~~~a~~AL~~t~n~~~e~A~~Wl~~h~ 49 (64)
T d1whca_ 11 TALESLIEM--GFPRGRAEKALALTGNQGIEAAMDWLMEHE 49 (64)
T ss_dssp CHHHHHHTT--TCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHc--CCCHHHHHHHHHHhCCCCHHHHHHHHHHCC
Confidence 356777777 4899999999999545 6999999999976
No 16
>d1wj7a1 a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-like Ubap2l {Mouse (Mus musculus) [TaxId: 10090]}
Probab=60.21 E-value=12 Score=26.14 Aligned_cols=45 Identities=16% Similarity=0.228 Sum_probs=38.6
Q ss_pred CchHHHHHHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhcCC
Q psy15354 117 YDSRMYAEAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIADS 162 (218)
Q Consensus 117 ~~~~~~~m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~Gr 162 (218)
+++.|+.+|.||.+|-- =+.+.+.-.|-...++++.+|+-||||.
T Consensus 28 ~D~~i~~kVkql~e~T~-rsede~~~ALhDcn~D~~~AIn~lLEg~ 72 (91)
T d1wj7a1 28 NDADFEEKVKQLIDITG-KNQDECVIALHDCNGDVNRAINVLLEGN 72 (91)
T ss_dssp CCHHHHHHHHHHHHHTC-CCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred CcHHHHHHHHHHHHHhC-CCHHHHHHHHhcCCccHHHHHHHHHhcC
Confidence 68899999999999964 5556666668888999999999999997
No 17
>d1pdnc_ a.4.1.5 (C:) Paired protein (prd) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=50.72 E-value=29 Score=24.44 Aligned_cols=76 Identities=20% Similarity=0.138 Sum_probs=48.6
Q ss_pred HHHHHhCCCCccCCCHHHHHHHHHHHHHHHh-hc-C---CCCCCCchHHHHHHHHHHHhCCCCCHHHHHHHHhhccCC--
Q psy15354 78 ACIACEGRLSPTLCTPSEKYELEKRLVRALA-TQ-N---SGARRYDSRMYAEAQRIREIFPNIPLNAIVRELGRSHGN-- 150 (218)
Q Consensus 78 ~~iA~~Lgi~~t~~t~~dk~e~~kr~~~~~~-~~-~---~~~~~~~~~~~~m~~~V~~~fP~v~~~~I~~DL~~~t~s-- 150 (218)
..||+.+||+.. =...+.+|++..-. .+ + +.+.......+.++..+.+.-|++....|...|.. .|-
T Consensus 36 r~iA~~~~VS~~-----tV~k~l~r~~~~G~~~~~~~~~~rpr~~t~~~~~~I~~~~~~~P~~t~~El~~~L~~-egv~~ 109 (123)
T d1pdnc_ 36 CVISRQLRVSHG-----CVSKILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIR-EGVCD 109 (123)
T ss_dssp HHHHHHHTCCHH-----HHHHHHHHHHHHCCSSCCCCSCCCCCSSCSTHHHHHHHTTTTCTTCCHHHHHHHHHH-TSSSC
T ss_pred HHHHHHHCcCHH-----HHHHHHHHHHccCCcCcCCCCCCCCCCCCHHHHHHHHHHHHhCCCccHHHHHHHHHH-cCCCC
Confidence 456677775543 23344555544321 12 1 12234566788999999999999999999999987 441
Q ss_pred --H---HHHHHHHh
Q psy15354 151 --A---ELTISRLI 159 (218)
Q Consensus 151 --v---~~T~~~iL 159 (218)
. -.||.+||
T Consensus 110 ~~~~pSvStI~RiL 123 (123)
T d1pdnc_ 110 RSTAPSVSAISRLV 123 (123)
T ss_dssp STTCCCHHHHHHHC
T ss_pred CCCCCChhhHhhcC
Confidence 1 35787776
No 18
>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]}
Probab=43.98 E-value=5.5 Score=34.15 Aligned_cols=25 Identities=16% Similarity=0.137 Sum_probs=16.7
Q ss_pred HHHHHHHHhccCCCCeEeccCcccc
Q psy15354 24 FLSKLKSFLCRTEAPIVLFPEEETT 48 (218)
Q Consensus 24 ~~~~ik~~~~~~~~PlliFPEGt~T 48 (218)
.++.+.+.+...+.-|+||||||-+
T Consensus 211 al~~~~~lL~~Gg~~v~IfPEGTRs 235 (367)
T d1iuqa_ 211 SLKEMALLLRGGSQLIWIAPSGGRD 235 (367)
T ss_dssp HHHHHHHHHHHCCCEEEECTTCSCC
T ss_pred HHHHHHHHhhcCCeEEEEeccCccc
Confidence 3444455555555667899999976
No 19
>d1wxqa2 d.15.10.2 (A:320-395) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=37.26 E-value=9.6 Score=25.44 Aligned_cols=43 Identities=26% Similarity=0.365 Sum_probs=26.5
Q ss_pred eEecc---CcccccCccccccccc-cccCCCCCCHHHHHHHHHHHHHHhC
Q psy15354 39 IVLFP---EEETTNGKKGLLKFLP-VMKRAQNETDEDLMSRIEACIACEG 84 (218)
Q Consensus 39 lliFP---EGt~TNg~~~Ll~FLP-~~~~~~~E~~~~FA~rV~~~iA~~L 84 (218)
|.+|| |.+.++.+ |=+ || ++.-..+-+..+||..|-..|++.+
T Consensus 1 i~vyPv~d~~~~~~~~-g~v--l~D~~~Lp~GsTv~D~A~~IH~dlg~~~ 47 (76)
T d1wxqa2 1 IPVYPVHDENKLTDQF-GNV--LPHVFLMKKGSTPRDLAFKVHTDLGKGF 47 (76)
T ss_dssp EEEEEESCC-----CC-SCS--SCCCEEEETTCCHHHHHHHHCHHHHHTE
T ss_pred CceECccCCCEEECCC-CCC--ccccEEeCCCCcHHHHHHHHhHHHHhhe
Confidence 46789 77888777 533 33 1222348899999999999999853
No 20
>d1tuba1 c.32.1.1 (A:1-245) Tubulin alpha-subunit {Pig (Sus scrofa) [TaxId: 9823]}
Probab=35.89 E-value=6.3 Score=31.79 Aligned_cols=31 Identities=10% Similarity=0.225 Sum_probs=25.9
Q ss_pred CCCccccceecCCCCcccHHHHHHHHHHHhccCC
Q psy15354 3 GGGECLGLINLGRNTRFSRSTFLSKLKSFLCRTE 36 (218)
Q Consensus 3 ~~~~~~g~~~~g~~~~~sR~~~~~~ik~~~~~~~ 36 (218)
|.+|++||..-|.. -.+++++.|++-++.-+
T Consensus 100 gNNwA~Gy~~~G~~---~~d~i~d~iRk~~E~cD 130 (245)
T d1tuba1 100 ANNYARGHYTIGKE---IIDLVLDRIRKLADQCT 130 (245)
T ss_dssp CCSSSTTTTSHHHH---TTHHHHHHHHHHTTSSS
T ss_pred ccchHhhhhccchh---hHHHHHHHHHHHHHhCC
Confidence 78999999887743 68899999998887777
No 21
>d1wjoa_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.89 E-value=32 Score=23.95 Aligned_cols=81 Identities=11% Similarity=0.202 Sum_probs=58.7
Q ss_pred cHHHHHHHHHHHhccCC--CCeEeccCcccccCccccccccccccCC---------CCCCHHHHHHHHHHHH--HHhCCC
Q psy15354 20 SRSTFLSKLKSFLCRTE--APIVLFPEEETTNGKKGLLKFLPVMKRA---------QNETDEDLMSRIEACI--ACEGRL 86 (218)
Q Consensus 20 sR~~~~~~ik~~~~~~~--~PlliFPEGt~TNg~~~Ll~FLP~~~~~---------~~E~~~~FA~rV~~~i--A~~Lgi 86 (218)
+.+.+++-+..++...+ .+|.-|=+-...||. .|+..|-.+.+. ...+..+..++++.++ |+.+|+
T Consensus 8 ~e~~ll~WvN~~L~~~g~~~~i~~f~d~dl~DG~-~L~~Ll~~l~p~~i~~~~~~~~~~~~~~~~~N~~~al~~~~~lgi 86 (124)
T d1wjoa_ 8 NDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSL-AVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGA 86 (124)
T ss_dssp CCHHHHHHHHHHHHHHTCSCCCSCTTCTTGGGTH-HHHHHHHHHSTTSCCTTTSCCSSCCHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHHcCCCCCcCcCCccccccHH-HHHHHHHHHHhccCCHHhcccCCccHhhHHHHHHHHHHHHHHhCC
Confidence 78899999988887654 456666434689999 888884333332 2346788888888875 678999
Q ss_pred CccCCCHHHHHHHHHH
Q psy15354 87 SPTLCTPSEKYELEKR 102 (218)
Q Consensus 87 ~~t~~t~~dk~e~~kr 102 (218)
+. ..+.+|..+-..+
T Consensus 87 ~~-~i~~eDI~~gn~k 101 (124)
T d1wjoa_ 87 RV-YALPEDLVEVKPK 101 (124)
T ss_dssp SC-CCCHHHHHHTCTT
T ss_pred cc-cCCHHHccCCCch
Confidence 85 6899998865444
No 22
>d1tubb1 c.32.1.1 (B:1-245) Tubulin beta-subunit {Pig (Sus scrofa) [TaxId: 9823]}
Probab=29.79 E-value=5.1 Score=32.22 Aligned_cols=31 Identities=13% Similarity=0.094 Sum_probs=25.4
Q ss_pred CCCccccceecCCCCcccHHHHHHHHHHHhccCC
Q psy15354 3 GGGECLGLINLGRNTRFSRSTFLSKLKSFLCRTE 36 (218)
Q Consensus 3 ~~~~~~g~~~~g~~~~~sR~~~~~~ik~~~~~~~ 36 (218)
|.+|++||...|.. =.+++++.|++.++.-+
T Consensus 98 gNNwA~Gy~~~G~~---~~d~i~d~iRk~~E~cD 128 (243)
T d1tubb1 98 GNNWAKGHYTEGAE---LVDSVLDVVRKESESCD 128 (243)
T ss_dssp CSSTHHHHTSHHHH---HHHHHHHHHHHHHHSSS
T ss_pred ccceeeeeeccCHH---HHHHHHHHHHHHHHhCC
Confidence 78999999777743 67888999998888777
No 23
>d1veka_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=29.62 E-value=72 Score=21.08 Aligned_cols=39 Identities=5% Similarity=0.028 Sum_probs=31.5
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHhhcc-CCHHHHHHHHhcCC
Q psy15354 122 YAEAQRIREIFPNIPLNAIVRELGRSH-GNAELTISRLIADS 162 (218)
Q Consensus 122 ~~m~~~V~~~fP~v~~~~I~~DL~~~t-~sv~~T~~~iL~Gr 162 (218)
..++.++.+| -++....++.|..+. ++|++.++-||+..
T Consensus 30 ~~~v~~L~~M--GF~~~~a~~AL~~t~n~~~e~A~~Wl~~h~ 69 (84)
T d1veka_ 30 EEIVAQLVSM--GFSQLHCQKAAINTSNAGVEEAMNWLLSHM 69 (84)
T ss_dssp HHHHHHHHHH--TCCHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHc--CCCHHHHHHHHHHHcCCCHHHHHHHHHHcC
Confidence 3567777777 688999999998833 37999999999965
No 24
>d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]}
Probab=29.30 E-value=43 Score=21.17 Aligned_cols=71 Identities=8% Similarity=0.011 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHhCCCCccCCCHHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHHHHHhCC-CCCHHHHHHHHhhcc
Q psy15354 70 EDLMSRIEACIACEGRLSPTLCTPSEKYELEKRLVRALATQNSGARRYDSRMYAEAQRIREIFP-NIPLNAIVRELGRSH 148 (218)
Q Consensus 70 ~~FA~rV~~~iA~~Lgi~~t~~t~~dk~e~~kr~~~~~~~~~~~~~~~~~~~~~m~~~V~~~fP-~v~~~~I~~DL~~~t 148 (218)
++....|+..+|+.||++...++...-+.-. .-+...+-.++..|.+.|- +||...+. . -
T Consensus 7 ~~i~~~l~~iv~~~l~~~~~~i~~~~~~~dl--------------G~DSl~~v~l~~~ie~~f~i~i~~~~~~----~-~ 67 (85)
T d1vkua_ 7 KKLIAKFVEIASEKMGKDLETVDEENTFKEL--------------GFDSIDVIDLVMFFEDEFALRIEDEEIS----K-I 67 (85)
T ss_dssp HHHHHHHHHHHHHTTCCCCCSCCTTSBTTTT--------------TCCHHHHHHHHHHHHHHHTCCCCHHHHT----T-C
T ss_pred HHHHHHHHHHHHHHHCCCHHHCCCCCCHHHh--------------cCcchHHHHHHHHHHHHccCCCCHHHHH----H-c
Confidence 5677899999999999998877665322110 1345567778888888886 77766543 3 6
Q ss_pred CCHHHHHHHHh
Q psy15354 149 GNAELTISRLI 159 (218)
Q Consensus 149 ~sv~~T~~~iL 159 (218)
.+|..-++.|.
T Consensus 68 ~Tv~~l~~~i~ 78 (85)
T d1vkua_ 68 RKVKDLIDIVI 78 (85)
T ss_dssp CBHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 66766666554
No 25
>d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.50 E-value=64 Score=19.49 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=26.4
Q ss_pred HHHHHHhCCCCCHHHHHHHHhhccC-CHHHHHHHHhc
Q psy15354 125 AQRIREIFPNIPLNAIVRELGRSHG-NAELTISRLIA 160 (218)
Q Consensus 125 ~~~V~~~fP~v~~~~I~~DL~~~t~-sv~~T~~~iL~ 160 (218)
++++-+| -++.....+.|..+++ +|+..++-||+
T Consensus 16 l~~L~~M--GF~~~~a~~AL~~t~n~~ve~A~~WLl~ 50 (51)
T d2cpwa1 16 LDVLLSM--GFPRARAQKALASTGGRSVQTACDWLFS 50 (51)
T ss_dssp HHHHHHH--TCCHHHHHHHHHHTTTSCHHHHHHHHHS
T ss_pred HHHHHHc--CCCHHHHHHHHHHHCCCCHHHHHHHHHc
Confidence 3444555 4899999999999444 69999999986
No 26
>d1uf5a_ d.160.1.2 (A:) N-carbamoyl-D-aminoacid amidohydrolase {Agrobacterium sp. [TaxId: 361]}
Probab=26.00 E-value=22 Score=27.61 Aligned_cols=29 Identities=28% Similarity=0.464 Sum_probs=21.6
Q ss_pred cHHHHHHHHHHHhc---cCCCCeEeccCcccc
Q psy15354 20 SRSTFLSKLKSFLC---RTEAPIVLFPEEETT 48 (218)
Q Consensus 20 sR~~~~~~ik~~~~---~~~~PlliFPEGt~T 48 (218)
+++..++++.+.+. ..+.-|++|||...+
T Consensus 19 ~~~~~l~r~~~li~~A~~~gadlvvfPE~~l~ 50 (303)
T d1uf5a_ 19 TREQVVVRLLDMLTKAASRGANFIVFPELALT 50 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEECCTTTTS
T ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEcCCCccc
Confidence 78888888876654 345789999996544
No 27
>d2btoa1 c.32.1.1 (A:3-246) Tubulin alpha-subunit {Prosthecobacter dejongeii [TaxId: 48465]}
Probab=21.20 E-value=7.9 Score=31.05 Aligned_cols=32 Identities=22% Similarity=0.427 Sum_probs=25.2
Q ss_pred CCCCccccceecCCCCcccHHHHHHHHHHHhccCC
Q psy15354 2 EGGGECLGLINLGRNTRFSRSTFLSKLKSFLCRTE 36 (218)
Q Consensus 2 ~~~~~~~g~~~~g~~~~~sR~~~~~~ik~~~~~~~ 36 (218)
-|++|++||..-|.. =.+++++.|++-++.-+
T Consensus 99 sgnNwa~Gy~~~G~~---~~d~i~d~irk~~E~cD 130 (244)
T d2btoa1 99 AGGNFAVGYLGAGRE---VLPEVMSRLDYEIDKCD 130 (244)
T ss_dssp CTTCHHHHHTSHHHH---HHHHHHHHHHHHHHHCS
T ss_pred cccchhhhcchhHHH---HHHHHHHHHHHHHHhCC
Confidence 378999999887742 46788888888887776
No 28
>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=21.07 E-value=53 Score=19.58 Aligned_cols=36 Identities=8% Similarity=0.140 Sum_probs=29.9
Q ss_pred HHHHHHHhCCCCCHHHHHHHHhhccCCHHHHHHHHhcC
Q psy15354 124 EAQRIREIFPNIPLNAIVRELGRSHGNAELTISRLIAD 161 (218)
Q Consensus 124 m~~~V~~~fP~v~~~~I~~DL~~~t~sv~~T~~~iL~G 161 (218)
.|+.+-+| -+..+.-+..|++..++.++.++.+|+|
T Consensus 7 ai~eL~~M--GF~e~~A~~AL~k~~wnleaAtN~LLd~ 42 (43)
T d2g3qa1 7 AVEELSGM--GFTEEEAHNALEKCNWDLEAATNFLLDS 42 (43)
T ss_dssp HHHHHHTT--TSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred HHHHHHhc--CCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 45555555 5778889999999999999999999987
No 29
>d1qd1a1 d.58.34.1 (A:2-180) Formiminotransferase domain of formiminotransferase-cyclodeaminase. {Pig (Sus scrofa) [TaxId: 9823]}
Probab=20.84 E-value=37 Score=25.98 Aligned_cols=71 Identities=11% Similarity=0.091 Sum_probs=47.7
Q ss_pred cHHHHHHHHHHHhccC-CCC-eEeccCcccccCccccccc---------------------------------------c
Q psy15354 20 SRSTFLSKLKSFLCRT-EAP-IVLFPEEETTNGKKGLLKF---------------------------------------L 58 (218)
Q Consensus 20 sR~~~~~~ik~~~~~~-~~P-lliFPEGt~TNg~~~Ll~F---------------------------------------L 58 (218)
-++.+++.|.+.+... +.. |=+||. .-+|.. ++.| .
T Consensus 14 R~~~~I~~I~~a~~~~~gv~lL~v~~D-~d~NRt--V~T~vg~p~~v~~aa~~~~~~A~e~IDm~~H~G~HPR~GavDv~ 90 (179)
T d1qd1a1 14 KNQEVIDAISRAVAQTPGCVLLDVDSG-PSTNRT--VYTFVGRPEDVVEGALNAARAAYQLIDMSRHHGEHPRMGALDVC 90 (179)
T ss_dssp SCHHHHHHHHHHHHTSTTCEEEEEEEE-TTTTEE--EEEEEECHHHHHHHHHHHHHHHHHHCCGGGCCCSSCCSBSEEEE
T ss_pred CCHHHHHHHHHHHhcCCCcEEEeCCCC-CCCCCe--EEEEecChHHHHHHHHHHHHHHHHhcChhhccccCCcCccccee
Confidence 4678889998877654 333 456663 455555 7888 2
Q ss_pred c--cccCCCCCCHHHHHHHHHHHHHHhCCCCccCCCH
Q psy15354 59 P--VMKRAQNETDEDLMSRIEACIACEGRLSPTLCTP 93 (218)
Q Consensus 59 P--~~~~~~~E~~~~FA~rV~~~iA~~Lgi~~t~~t~ 93 (218)
| |+..-.-|...+.|.++-+.|++.||||+--|..
T Consensus 91 PfiPl~~~t~eec~~lA~~~a~~i~~~l~vPVfLYg~ 127 (179)
T d1qd1a1 91 PFIPVRGVTMDECVRCAQAFGQRLAEELGVPVYLYGE 127 (179)
T ss_dssp EEEEEESCCHHHHHHHHHHHHHHHHHHHTCCEEEEET
T ss_pred eeecCCCCCHHHHHHHHHHHHHHHHhhcCCceEEehh
Confidence 1 1222223566789999999999999999876654
Done!