BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy15360
         (109 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3GW0|A Chain A, Urod Mutant G318r
          Length = 367

 Score =  150 bits (378), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/103 (63%), Positives = 80/103 (77%), Gaps = 1/103 (0%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSII-KNKTLQGNLDPCALYASKE 63
           VPM IFAK  H+ALEEL Q  Y++VG+DWT+ P  AR  + K  TLQGNLDPCALYAS+E
Sbjct: 256 VPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEE 315

Query: 64  KLRKIGTQMAKEFGKSRYIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++R++  QM  +FG  RYIANLGHG+YPDMDPEHV   +DA+H
Sbjct: 316 EIRQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVH 358


>pdb|3GW3|A Chain A, Human Urod Mutant K297n
          Length = 367

 Score =  147 bits (371), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSIIKNK-TLQGNLDPCALYASKE 63
           VPM IFAK  H+ALEEL Q  Y++VG+DWT+ P  AR  + N  TLQGNLDPCALYAS+E
Sbjct: 256 VPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGNTVTLQGNLDPCALYASEE 315

Query: 64  KLRKIGTQMAKEFGKSRYIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++ ++  QM  +FG  RYIANLGHG+YPDMDPEHV   +DA+H
Sbjct: 316 EIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVH 358


>pdb|1R3W|A Chain A, Uroporphyrinogen Decarboxylase Y164f Mutant In Complex
           With Coproporphyrinogen-Iii
          Length = 367

 Score =  147 bits (370), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSII-KNKTLQGNLDPCALYASKE 63
           VPM IFAK  H+ALEEL Q  Y++VG+DWT+ P  AR  + K  TLQGNLDPCALYAS+E
Sbjct: 256 VPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEE 315

Query: 64  KLRKIGTQMAKEFGKSRYIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++ ++  QM  +FG  RYIANLGHG+YPDMDPEHV   +DA+H
Sbjct: 316 EIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVH 358


>pdb|1R3S|A Chain A, Uroporphyrinogen Decarboxylase Single Mutant D86g In
           Complex With Coproporphyrinogen-I
 pdb|1R3T|A Chain A, Uroporphyrinogen Decarboxylase Single Mutant D86g In
           Complex With Coproporphyrinogen-Iii
          Length = 367

 Score =  147 bits (370), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSII-KNKTLQGNLDPCALYASKE 63
           VPM IFAK  H+ALEEL Q  Y++VG+DWT+ P  AR  + K  TLQGNLDPCALYAS+E
Sbjct: 256 VPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEE 315

Query: 64  KLRKIGTQMAKEFGKSRYIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++ ++  QM  +FG  RYIANLGHG+YPDMDPEHV   +DA+H
Sbjct: 316 EIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVH 358


>pdb|2Q71|A Chain A, Uroporphyrinogen Decarboxylase G168r Single Mutant Enzyme
           In Complex With Coproporphyrinogen-Iii
 pdb|2Q6Z|A Chain A, Uroporphyrinogen Decarboxylase G168r Single Mutant Apo-
           Enzyme
          Length = 356

 Score =  147 bits (370), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSII-KNKTLQGNLDPCALYASKE 63
           VPM IFAK  H+ALEEL Q  Y++VG+DWT+ P  AR  + K  TLQGNLDPCALYAS+E
Sbjct: 246 VPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEE 305

Query: 64  KLRKIGTQMAKEFGKSRYIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++ ++  QM  +FG  RYIANLGHG+YPDMDPEHV   +DA+H
Sbjct: 306 EIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVH 348


>pdb|1R3V|A Chain A, Uroporphyrinogen Decarboxylase Single Mutant D86e In
           Complex With Coproporphyrinogen-I
          Length = 367

 Score =  147 bits (370), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSII-KNKTLQGNLDPCALYASKE 63
           VPM IFAK  H+ALEEL Q  Y++VG+DWT+ P  AR  + K  TLQGNLDPCALYAS+E
Sbjct: 256 VPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEE 315

Query: 64  KLRKIGTQMAKEFGKSRYIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++ ++  QM  +FG  RYIANLGHG+YPDMDPEHV   +DA+H
Sbjct: 316 EIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVH 358


>pdb|1R3R|A Chain A, Uroporphyrinogen Decarboxylase With Mutation D86n
          Length = 367

 Score =  147 bits (370), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSII-KNKTLQGNLDPCALYASKE 63
           VPM IFAK  H+ALEEL Q  Y++VG+DWT+ P  AR  + K  TLQGNLDPCALYAS+E
Sbjct: 256 VPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEE 315

Query: 64  KLRKIGTQMAKEFGKSRYIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++ ++  QM  +FG  RYIANLGHG+YPDMDPEHV   +DA+H
Sbjct: 316 EIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVH 358


>pdb|1URO|A Chain A, Uroporphyrinogen Decarboxylase
 pdb|1R3Q|A Chain A, Uroporphyrinogen Decarboxylase In Complex With
           Coproporphyrinogen-I
 pdb|1R3Y|A Chain A, Uroporphyrinogen Decarboxylase In Complex With
           Coproporphyrinogen-Iii
 pdb|3GVQ|A Chain A, Urod Single-Chain Dimer
 pdb|3GVR|A Chain A, Single-Chain Urod Y164g (Gy) Mutation
          Length = 367

 Score =  147 bits (370), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSII-KNKTLQGNLDPCALYASKE 63
           VPM IFAK  H+ALEEL Q  Y++VG+DWT+ P  AR  + K  TLQGNLDPCALYAS+E
Sbjct: 256 VPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEE 315

Query: 64  KLRKIGTQMAKEFGKSRYIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++ ++  QM  +FG  RYIANLGHG+YPDMDPEHV   +DA+H
Sbjct: 316 EIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVH 358


>pdb|3GVV|A Chain A, Single-Chain Urod Y164g (Gy) Mutation
 pdb|3GVW|A Chain A, Single-Chain Urod F217y (Yf) Mutation
          Length = 367

 Score =  147 bits (370), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSII-KNKTLQGNLDPCALYASKE 63
           VPM IFAK  H+ALEEL Q  Y++VG+DWT+ P  AR  + K  TLQGNLDPCALYAS+E
Sbjct: 256 VPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEE 315

Query: 64  KLRKIGTQMAKEFGKSRYIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++ ++  QM  +FG  RYIANLGHG+YPDMDPEHV   +DA+H
Sbjct: 316 EIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVH 358


>pdb|1JPI|A Chain A, Phe232leu Mutant Of Human Urod, Human Uroporphyrinogen Iii
           Decarboxylase
          Length = 388

 Score =  147 bits (370), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSII-KNKTLQGNLDPCALYASKE 63
           VPM IFAK  H+ALEEL Q  Y++VG+DWT+ P  AR  + K  TLQGNLDPCALYAS+E
Sbjct: 277 VPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEE 336

Query: 64  KLRKIGTQMAKEFGKSRYIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++ ++  QM  +FG  RYIANLGHG+YPDMDPEHV   +DA+H
Sbjct: 337 EIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVH 379


>pdb|1JPK|A Chain A, Gly156asp Mutant Of Human Urod, Human Uroporphyrinogen Iii
           Decarboxylase
          Length = 388

 Score =  147 bits (370), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSII-KNKTLQGNLDPCALYASKE 63
           VPM IFAK  H+ALEEL Q  Y++VG+DWT+ P  AR  + K  TLQGNLDPCALYAS+E
Sbjct: 277 VPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEE 336

Query: 64  KLRKIGTQMAKEFGKSRYIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++ ++  QM  +FG  RYIANLGHG+YPDMDPEHV   +DA+H
Sbjct: 337 EIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVH 379


>pdb|1JPH|A Chain A, Ile260thr Mutant Of Human Urod, Human Uroporphyrinogen Iii
           Decarboxylase
          Length = 388

 Score =  145 bits (365), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 63/103 (61%), Positives = 78/103 (75%), Gaps = 1/103 (0%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSII-KNKTLQGNLDPCALYASKE 63
           VPM  FAK  H+ALEEL Q  Y++VG+DWT+ P  AR  + K  TLQGNLDPCALYAS+E
Sbjct: 277 VPMITFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEE 336

Query: 64  KLRKIGTQMAKEFGKSRYIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++ ++  QM  +FG  RYIANLGHG+YPDMDPEHV   +DA+H
Sbjct: 337 EIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVH 379


>pdb|3CYV|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase From
           Shigella Flexineri: New Insights Into Its Catalytic
           Mechanism
          Length = 354

 Score = 84.3 bits (207), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 2/104 (1%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSIIKNKT-LQGNLDPCALYASKE 63
           VP+T+F KG    LE + +T  D +G+DWT + + AR  + NK  LQGN+DP  LYA   
Sbjct: 243 VPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPA 302

Query: 64  KLRKIGTQMAKEFGKSR-YIANLGHGIYPDMDPEHVQVLIDAIH 106
           ++ +    +   FG    ++ NLGHGI+ D+ PEH  V ++A+H
Sbjct: 303 RIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346


>pdb|4EXQ|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase (Upd)
           From Burkholderia Thailandensis E264
          Length = 368

 Score = 77.0 bits (188), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/104 (40%), Positives = 55/104 (52%), Gaps = 2/104 (1%)

Query: 5   VPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSIIKNK-TLQGNLDPCALYASKE 63
           VP   F KG    LE+L  T  D VG+DWT+    AR  +  +  LQGNLDP  L+A  E
Sbjct: 253 VPAIAFTKGGGLWLEDLAATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPE 312

Query: 64  KLRKIGTQMAKEFGKSR-YIANLGHGIYPDMDPEHVQVLIDAIH 106
            +R     +   +G    ++ NLGHGI     PEHV  L+D +H
Sbjct: 313 AIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVH 356


>pdb|2INF|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase From
           Bacillus Subtilis
 pdb|2INF|B Chain B, Crystal Structure Of Uroporphyrinogen Decarboxylase From
           Bacillus Subtilis
 pdb|2INF|C Chain C, Crystal Structure Of Uroporphyrinogen Decarboxylase From
           Bacillus Subtilis
 pdb|2INF|D Chain D, Crystal Structure Of Uroporphyrinogen Decarboxylase From
           Bacillus Subtilis
          Length = 359

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 1/105 (0%)

Query: 4   DVPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSIIKNKTLQGNLDPCALYASKE 63
           +VP+ +F  GA +   + +    D+VG+DW +    ARS    KT+QGNLDP  L A  E
Sbjct: 244 NVPLIMFGVGASHLAGDWHDLPLDVVGLDWRLGIDEARSKGITKTVQGNLDPSILLAPWE 303

Query: 64  KLRKIGTQMAKEFGKSR-YIANLGHGIYPDMDPEHVQVLIDAIHD 107
            + +   ++  +  +S  +I NLGHG++PD+ PE ++ L   +H+
Sbjct: 304 VIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPEVLKKLTAFVHE 348


>pdb|2EJA|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase From
           Aquifex Aeolicus
 pdb|2EJA|B Chain B, Crystal Structure Of Uroporphyrinogen Decarboxylase From
           Aquifex Aeolicus
          Length = 338

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 4/105 (3%)

Query: 3   NDVPMTIFAKGAHYALEELNQTKYDIVGIDWTIE-PSLARSIIKNKTLQGNLDPCALYAS 61
           +D P+  F +G+   ++     + D + +DW+++ P L +  I +K  QGNL+P  LYAS
Sbjct: 230 SDTPVIYFFRGSSSFIDLAVDYRADALSVDWSVDIPELFK--IYDKGFQGNLEPAVLYAS 287

Query: 62  KEKLRKIGTQMAKEFG-KSRYIANLGHGIYPDMDPEHVQVLIDAI 105
           +E + +    + +    K+RY+ NLGHG+ PDM+ E V+ L+D +
Sbjct: 288 EEVIEEKTLGLLRRIPVKTRYVFNLGHGLAPDMELEKVKYLVDLV 332


>pdb|1J93|A Chain A, Crystal Structure And Substrate Binding Modeling Of The
           Uroporphyrinogen-Iii Decarboxylase From Nicotiana
           Tabacum: Implications For The Catalytic Mechanism
          Length = 353

 Score = 65.9 bits (159), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 1/87 (1%)

Query: 4   DVPMTIFAKGAHYALEELNQTKYDIVGIDWTIEPSLARSII-KNKTLQGNLDPCALYASK 62
           ++P+ ++A G+   LE L  T  D+V +DWT++ +  R  +  N  +QGN+DP  L+ SK
Sbjct: 246 NLPLILYASGSGGLLERLPLTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSK 305

Query: 63  EKLRKIGTQMAKEFGKSRYIANLGHGI 89
           E +        K+ GK ++I NLGHGI
Sbjct: 306 EFITNRINDTVKKAGKGKHILNLGHGI 332


>pdb|4GQ2|M Chain M, S. Pombe Nup120-Nup37 Complex
          Length = 950

 Score = 26.9 bits (58), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/17 (47%), Positives = 14/17 (82%)

Query: 89  IYPDMDPEHVQVLIDAI 105
           IYP++DP+++  LID +
Sbjct: 624 IYPNVDPDYISTLIDTL 640


>pdb|4FHM|B Chain B, Nup37-Nup120(Aa1-961) Complex From Schizosaccharomyces
           Pombe
          Length = 964

 Score = 26.9 bits (58), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/17 (47%), Positives = 14/17 (82%)

Query: 89  IYPDMDPEHVQVLIDAI 105
           IYP++DP+++  LID +
Sbjct: 626 IYPNVDPDYISTLIDTL 642


>pdb|4FHN|B Chain B, Nup37-Nup120 Full-Length Complex From Schizosaccharomyces
           Pombe
 pdb|4FHN|D Chain D, Nup37-Nup120 Full-Length Complex From Schizosaccharomyces
           Pombe
          Length = 1139

 Score = 26.9 bits (58), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/17 (47%), Positives = 14/17 (82%)

Query: 89  IYPDMDPEHVQVLIDAI 105
           IYP++DP+++  LID +
Sbjct: 626 IYPNVDPDYISTLIDTL 642


>pdb|1LQA|A Chain A, Tas Protein From Escherichia Coli In Complex With Nadph
 pdb|1LQA|B Chain B, Tas Protein From Escherichia Coli In Complex With Nadph
          Length = 346

 Score = 26.6 bits (57), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 8/76 (10%)

Query: 15  HYALEELNQTKYDIVGIDWTIEPS-----LARSIIKNK---TLQGNLDPCALYASKEKLR 66
           H +L+ L     D+  + W   P+     L  S   +    +L   LD  A Y    K+R
Sbjct: 115 HDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIR 174

Query: 67  KIGTQMAKEFGKSRYI 82
            IG      FG  RY+
Sbjct: 175 YIGVSNETAFGVMRYL 190


>pdb|3NQP|A Chain A, Crystal Structure Of A Susd Superfamily Protein (Bf1802)
           From Bacteroides Fragilis Nctc 9343 At 1.90 A Resolution
 pdb|3NQP|B Chain B, Crystal Structure Of A Susd Superfamily Protein (Bf1802)
           From Bacteroides Fragilis Nctc 9343 At 1.90 A Resolution
          Length = 514

 Score = 26.6 bits (57), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 6/48 (12%)

Query: 49  LQGNLDPCALYASKEKLRKIGTQMAKEFGKS-RYIANLGHGIYPDMDP 95
           ++G +DP  LY ++   +++ TQ+  +  KS  Y  N       D DP
Sbjct: 147 VEGVIDPNKLYXARSTPKEVXTQIKSDLNKSXEYFGNXN-----DFDP 189


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.318    0.136    0.400 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,343,307
Number of Sequences: 62578
Number of extensions: 120239
Number of successful extensions: 270
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 230
Number of HSP's gapped (non-prelim): 22
length of query: 109
length of database: 14,973,337
effective HSP length: 73
effective length of query: 36
effective length of database: 10,405,143
effective search space: 374585148
effective search space used: 374585148
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)