Query psy15361
Match_columns 178
No_of_seqs 222 out of 1783
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 18:56:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15361.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15361hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2och_A Hypothetical protein DN 99.9 7.8E-23 2.7E-27 138.7 7.6 70 41-110 3-72 (73)
2 2o37_A Protein SIS1; HSP40, J- 99.9 7.3E-23 2.5E-27 144.8 7.0 76 41-116 3-78 (92)
3 1hdj_A Human HSP40, HDJ-1; mol 99.9 5.6E-22 1.9E-26 135.6 8.7 71 46-116 3-75 (77)
4 2dmx_A DNAJ homolog subfamily 99.9 1.1E-21 3.7E-26 138.6 8.1 74 44-117 7-84 (92)
5 2ctr_A DNAJ homolog subfamily 99.9 1.2E-21 4.2E-26 137.4 8.1 74 43-116 4-79 (88)
6 2ctp_A DNAJ homolog subfamily 99.8 1.7E-21 5.7E-26 133.6 7.2 71 42-112 3-75 (78)
7 2dn9_A DNAJ homolog subfamily 99.8 2.7E-21 9.4E-26 132.7 8.1 70 43-112 4-76 (79)
8 2ej7_A HCG3 gene; HCG3 protein 99.8 3.2E-21 1.1E-25 133.3 7.8 70 44-113 7-80 (82)
9 2yua_A Williams-beuren syndrom 99.8 4.7E-21 1.6E-25 137.2 7.9 71 40-110 11-84 (99)
10 2lgw_A DNAJ homolog subfamily 99.8 3.3E-21 1.1E-25 138.2 6.5 71 46-116 2-76 (99)
11 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.1E-20 3.9E-25 132.4 8.2 70 43-112 14-85 (88)
12 2ctq_A DNAJ homolog subfamily 99.8 7.9E-21 2.7E-25 138.9 7.2 73 41-113 15-90 (112)
13 1wjz_A 1700030A21RIK protein; 99.8 6.5E-21 2.2E-25 134.8 4.9 70 41-110 11-89 (94)
14 1bq0_A DNAJ, HSP40; chaperone, 99.8 7.7E-21 2.7E-25 136.9 5.3 72 45-116 2-76 (103)
15 2ctw_A DNAJ homolog subfamily 99.8 3.1E-20 1.1E-24 135.2 7.7 72 42-113 13-87 (109)
16 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 7.2E-20 2.5E-24 133.0 5.4 69 42-110 11-86 (109)
17 2l6l_A DNAJ homolog subfamily 99.8 4.5E-19 1.5E-23 136.2 6.3 68 43-110 7-83 (155)
18 3apq_A DNAJ homolog subfamily 99.8 9.4E-19 3.2E-23 138.6 8.1 71 46-116 2-75 (210)
19 2ys8_A RAB-related GTP-binding 99.7 5.5E-19 1.9E-23 124.5 4.1 61 44-104 25-87 (90)
20 1faf_A Large T antigen; J doma 99.7 9.5E-19 3.3E-23 120.5 3.5 61 45-106 10-72 (79)
21 1gh6_A Large T antigen; tumor 99.7 2.6E-19 8.8E-24 131.5 0.5 64 45-109 7-72 (114)
22 2pf4_E Small T antigen; PP2A, 99.7 4E-19 1.4E-23 139.2 -0.3 66 44-110 9-76 (174)
23 3hho_A CO-chaperone protein HS 99.7 8.3E-18 2.9E-22 131.7 5.3 66 45-110 3-78 (174)
24 3bvo_A CO-chaperone protein HS 99.7 2E-17 7E-22 132.9 6.8 74 32-109 33-116 (207)
25 1fpo_A HSC20, chaperone protei 99.7 1.3E-17 4.6E-22 130.2 5.0 64 47-110 2-75 (171)
26 3lz8_A Putative chaperone DNAJ 99.7 2E-18 6.7E-23 147.4 0.0 71 40-110 22-94 (329)
27 1iur_A KIAA0730 protein; DNAJ 99.7 7.6E-18 2.6E-22 118.4 2.0 61 42-102 12-76 (88)
28 2guz_A Mitochondrial import in 99.6 2.3E-17 7.7E-22 111.3 1.9 59 43-102 11-70 (71)
29 3uo3_A J-type CO-chaperone JAC 99.6 4.9E-17 1.7E-21 128.2 4.0 68 45-112 10-84 (181)
30 1n4c_A Auxilin; four helix bun 99.6 5.5E-17 1.9E-21 127.8 2.1 60 46-105 117-182 (182)
31 2qwo_B Putative tyrosine-prote 99.6 1.3E-16 4.6E-21 112.8 2.9 53 46-98 33-91 (92)
32 3ag7_A Putative uncharacterize 99.6 1.9E-16 6.6E-21 114.8 2.4 57 43-100 38-104 (106)
33 3apo_A DNAJ homolog subfamily 99.6 2E-16 6.9E-21 146.5 1.5 75 43-117 18-95 (780)
34 2guz_B Mitochondrial import in 99.1 9.9E-11 3.4E-15 77.5 4.0 52 46-98 4-58 (65)
35 2y4t_A DNAJ homolog subfamily 99.0 1.5E-10 5E-15 97.4 5.0 63 46-108 382-450 (450)
36 2pzi_A Probable serine/threoni 90.8 0.13 4.4E-06 46.6 3.0 46 45-95 628-675 (681)
37 2b7e_A PRE-mRNA processing pro 49.8 34 0.0012 21.4 4.7 49 61-109 3-56 (59)
38 2d7l_A WD repeat and HMG-box D 43.3 36 0.0012 22.2 4.3 43 65-108 18-60 (81)
39 1ckt_A High mobility group 1 p 43.1 56 0.0019 20.0 5.1 41 66-106 15-55 (71)
40 2eqz_A High mobility group pro 42.5 47 0.0016 21.4 4.9 42 65-106 28-69 (86)
41 4a3n_A Transcription factor SO 34.1 77 0.0026 19.2 4.7 41 64-106 14-54 (71)
42 3f27_D Transcription factor SO 28.2 1.1E+02 0.0039 19.2 5.0 49 45-106 10-58 (83)
43 1qqr_A Streptokinase domain B; 26.3 32 0.0011 25.2 1.9 32 47-78 33-64 (138)
44 1r5q_A KAI A, circadian oscill 25.6 1.4E+02 0.0046 20.6 4.9 34 60-93 11-44 (102)
45 2yrq_A High mobility group pro 25.3 1.3E+02 0.0045 21.8 5.4 42 65-106 28-69 (173)
46 1i11_A Transcription factor SO 24.9 1.3E+02 0.0044 18.9 4.7 41 65-107 17-57 (81)
47 2crj_A SWI/SNF-related matrix- 24.3 1.5E+02 0.0051 19.2 5.3 41 65-107 20-60 (92)
48 3nm9_A HMG-D, high mobility gr 23.7 1.3E+02 0.0046 18.4 4.6 37 65-106 16-52 (73)
49 2cs1_A PMS1 protein homolog 1; 22.6 1.4E+02 0.0047 19.4 4.5 41 65-107 20-60 (92)
50 1v2z_A Circadian clock protein 21.4 1.5E+02 0.0052 20.6 4.5 34 60-93 18-51 (111)
51 1aab_A High mobility group pro 21.3 55 0.0019 20.9 2.2 42 65-106 20-61 (83)
52 1wgf_A Upstream binding factor 21.2 1.5E+02 0.005 19.2 4.5 50 45-107 24-73 (90)
No 1
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.88 E-value=7.8e-23 Score=138.65 Aligned_cols=70 Identities=67% Similarity=1.128 Sum_probs=63.9
Q ss_pred CCCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhccccc
Q psy15361 41 NMVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQGAS 110 (178)
Q Consensus 41 ~~~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~ 110 (178)
.|+...+||+||||+++++.++||++|+++++++|||+++++.+.|+.|++||++|+||.+|..||.+|.
T Consensus 3 ~m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 3 AMVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp ---CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 4677889999999999999999999999999999999998888999999999999999999999998775
No 2
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.88 E-value=7.3e-23 Score=144.83 Aligned_cols=76 Identities=55% Similarity=0.865 Sum_probs=70.3
Q ss_pred CCCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhccccccccCCC
Q psy15361 41 NMVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQGASCLMAPL 116 (178)
Q Consensus 41 ~~~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~~~~~ 116 (178)
.|+...|||+||||+++++.++||++|++|++++|||+++++.++|+.|++||++|+||.+|..||..+..++..+
T Consensus 3 ~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 3 AMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp -CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred ccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 4677889999999999999999999999999999999998888999999999999999999999999988776543
No 3
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.86 E-value=5.6e-22 Score=135.63 Aligned_cols=71 Identities=44% Similarity=0.789 Sum_probs=65.9
Q ss_pred cCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC--ChHHHHHHHHHHHHHcCChhHHHHhccccccccCCC
Q psy15361 46 TTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNP--NEGEKFKQISMAYEVLSNPEKRELYDQGASCLMAPL 116 (178)
Q Consensus 46 ~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~--~~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~~~~~ 116 (178)
.|||+||||+++++.++||++|+++++++|||+++ .+.+.|+.|++||++|+||.+|..||..+..++.++
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 75 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGS 75 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCSS
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccccC
Confidence 58999999999999999999999999999999985 567899999999999999999999999998876654
No 4
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1.1e-21 Score=138.57 Aligned_cols=74 Identities=47% Similarity=0.836 Sum_probs=67.0
Q ss_pred CccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHHcCChhHHHHhccccccccCCCC
Q psy15361 44 KETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN----EGEKFKQISMAYEVLSNPEKRELYDQGASCLMAPLG 117 (178)
Q Consensus 44 ~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~----~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~~~~~~ 117 (178)
...|||+||||+++++.++||++|++|++++|||+++. +.++|+.|++||++|+||.+|..||..+..++..++
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~~ 84 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAGG 84 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCCCC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCCC
Confidence 45699999999999999999999999999999999865 357899999999999999999999999887776544
No 5
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1.2e-21 Score=137.40 Aligned_cols=74 Identities=41% Similarity=0.701 Sum_probs=67.0
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--hHHHHHHHHHHHHHcCChhHHHHhccccccccCCC
Q psy15361 43 VKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN--EGEKFKQISMAYEVLSNPEKRELYDQGASCLMAPL 116 (178)
Q Consensus 43 ~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~--~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~~~~~ 116 (178)
....+||+||||+++++.++||++|++|++++|||+++. +.++|+.|++||++|+||.+|..||..+..++..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 346799999999999999999999999999999999865 46889999999999999999999999988776544
No 6
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1.7e-21 Score=133.56 Aligned_cols=71 Identities=54% Similarity=0.816 Sum_probs=64.7
Q ss_pred CCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC--ChHHHHHHHHHHHHHcCChhHHHHhccccccc
Q psy15361 42 MVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNP--NEGEKFKQISMAYEVLSNPEKRELYDQGASCL 112 (178)
Q Consensus 42 ~~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~--~~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~ 112 (178)
.....|||+||||+++++.++||++|+++++++|||+++ ++.+.|+.|++||++|+||.+|..||..+..+
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 345679999999999999999999999999999999985 45689999999999999999999999987654
No 7
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=2.7e-21 Score=132.71 Aligned_cols=70 Identities=50% Similarity=0.723 Sum_probs=63.9
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHHcCChhHHHHhccccccc
Q psy15361 43 VKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN---EGEKFKQISMAYEVLSNPEKRELYDQGASCL 112 (178)
Q Consensus 43 ~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~---~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~ 112 (178)
....|||+||||+++++.++||++|+++++++|||+++. +.++|+.|++||++|+||.+|..||..+..+
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 456799999999999999999999999999999999853 4689999999999999999999999987654
No 8
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=3.2e-21 Score=133.28 Aligned_cols=70 Identities=47% Similarity=0.818 Sum_probs=63.9
Q ss_pred CccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHHHHcCChhHHHHhcccccccc
Q psy15361 44 KETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNE----GEKFKQISMAYEVLSNPEKRELYDQGASCLM 113 (178)
Q Consensus 44 ~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~----~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~~ 113 (178)
...|||+||||+++++.++||++|+++++++|||+++.. .++|+.|++||++|+||.+|..||..+..++
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 457999999999999999999999999999999998753 4689999999999999999999999887553
No 9
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=4.7e-21 Score=137.22 Aligned_cols=71 Identities=39% Similarity=0.668 Sum_probs=64.4
Q ss_pred CCCCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHHcCChhHHHHhccccc
Q psy15361 40 PNMVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN---EGEKFKQISMAYEVLSNPEKRELYDQGAS 110 (178)
Q Consensus 40 ~~~~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~---~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~ 110 (178)
...+...+||+||||+++++.++||++|++|++++|||+++. +.++|+.|++||++|+||.+|..||..+.
T Consensus 11 ~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 11 DCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp CCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 345667899999999999999999999999999999999864 46899999999999999999999998554
No 10
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.83 E-value=3.3e-21 Score=138.24 Aligned_cols=71 Identities=45% Similarity=0.800 Sum_probs=62.3
Q ss_pred cCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHHcCChhHHHHhccccccccCCC
Q psy15361 46 TTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN----EGEKFKQISMAYEVLSNPEKRELYDQGASCLMAPL 116 (178)
Q Consensus 46 ~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~----~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~~~~~ 116 (178)
.|||+||||+++++.++||++|+++++++|||+++. +.++|+.|++||++|+||.+|..||..+..++...
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~~ 76 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGT 76 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence 489999999999999999999999999999999875 35789999999999999999999999988776544
No 11
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=1.1e-20 Score=132.42 Aligned_cols=70 Identities=47% Similarity=0.695 Sum_probs=64.0
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC--ChHHHHHHHHHHHHHcCChhHHHHhccccccc
Q psy15361 43 VKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNP--NEGEKFKQISMAYEVLSNPEKRELYDQGASCL 112 (178)
Q Consensus 43 ~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~--~~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~ 112 (178)
....|||+||||+++++.++||++|+++++++|||+++ .+.++|+.|++||++|+||.+|..||..+..+
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 34679999999999999999999999999999999985 56789999999999999999999999987643
No 12
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=7.9e-21 Score=138.93 Aligned_cols=73 Identities=29% Similarity=0.518 Sum_probs=66.3
Q ss_pred CCCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHHcCChhHHHHhcccccccc
Q psy15361 41 NMVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN---EGEKFKQISMAYEVLSNPEKRELYDQGASCLM 113 (178)
Q Consensus 41 ~~~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~---~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~~ 113 (178)
.+....|||+||||+++++.++||++||+|++++|||++++ +.++|+.|++||++|+||.+|..||..+..++
T Consensus 15 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 15 RSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 34567899999999999999999999999999999999864 47899999999999999999999999887654
No 13
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.82 E-value=6.5e-21 Score=134.80 Aligned_cols=70 Identities=37% Similarity=0.657 Sum_probs=63.6
Q ss_pred CCCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---------hHHHHHHHHHHHHHcCChhHHHHhccccc
Q psy15361 41 NMVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN---------EGEKFKQISMAYEVLSNPEKRELYDQGAS 110 (178)
Q Consensus 41 ~~~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~---------~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~ 110 (178)
..+...|||+||||+++++.++||++|++|++++|||+++. +.++|+.|++||++|+||.+|..||..+.
T Consensus 11 ~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 34667899999999999999999999999999999999853 35789999999999999999999998765
No 14
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.82 E-value=7.7e-21 Score=136.93 Aligned_cols=72 Identities=43% Similarity=0.776 Sum_probs=65.9
Q ss_pred ccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHHcCChhHHHHhccccccccCCC
Q psy15361 45 ETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN---EGEKFKQISMAYEVLSNPEKRELYDQGASCLMAPL 116 (178)
Q Consensus 45 ~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~---~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~~~~~ 116 (178)
..|||+||||+++++.++||++|++|++++|||+++. +.++|+.|++||++|+||.+|..||..+..++..+
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 76 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQG 76 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhccc
Confidence 3589999999999999999999999999999999853 56899999999999999999999999998876654
No 15
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=3.1e-20 Score=135.21 Aligned_cols=72 Identities=46% Similarity=0.811 Sum_probs=65.3
Q ss_pred CCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHHcCChhHHHHhcccccccc
Q psy15361 42 MVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN---EGEKFKQISMAYEVLSNPEKRELYDQGASCLM 113 (178)
Q Consensus 42 ~~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~---~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~~ 113 (178)
.....+||+||||+++++.++||++|++|++++|||+++. +.++|+.|++||++|+||.+|..||..+..++
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~ 87 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGL 87 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccccc
Confidence 3556799999999999999999999999999999999875 36889999999999999999999999887653
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.79 E-value=7.2e-20 Score=133.01 Aligned_cols=69 Identities=38% Similarity=0.552 Sum_probs=63.3
Q ss_pred CCCccCchhhcCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC------hHHHHHHHHHHHHHcCChhHHHHhccccc
Q psy15361 42 MVKETTFYDILGVKPNC-TQDELKKAYRKLALKYHPDKNPN------EGEKFKQISMAYEVLSNPEKRELYDQGAS 110 (178)
Q Consensus 42 ~~~~~d~Y~vLgv~~~a-s~~eIK~aYr~l~~~~HPDk~~~------~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~ 110 (178)
+....|||+||||++++ +.++||++|+++++++|||++++ +.++|+.|++||++|+||.+|..||..+.
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 45578999999999999 99999999999999999999876 35789999999999999999999998764
No 17
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.76 E-value=4.5e-19 Score=136.18 Aligned_cols=68 Identities=37% Similarity=0.706 Sum_probs=61.9
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHHHHcCChhHHHHhccccc
Q psy15361 43 VKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNE---------GEKFKQISMAYEVLSNPEKRELYDQGAS 110 (178)
Q Consensus 43 ~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~---------~~~f~~I~~Ay~vL~d~~~R~~YD~~~~ 110 (178)
+...|||+||||+++++.++||++||+|++++|||+++.. .++|+.|++||++|+||.+|+.||..+.
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 4567999999999999999999999999999999998543 4789999999999999999999998654
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.76 E-value=9.4e-19 Score=138.60 Aligned_cols=71 Identities=41% Similarity=0.689 Sum_probs=65.0
Q ss_pred cCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHHcCChhHHHHhccccccccCCC
Q psy15361 46 TTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN---EGEKFKQISMAYEVLSNPEKRELYDQGASCLMAPL 116 (178)
Q Consensus 46 ~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~---~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~~~~~ 116 (178)
.|||+||||+++++.++||+|||++++++|||++++ +.++|+.|++||++|+||.+|+.||.++..++...
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~ 75 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 75 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc
Confidence 489999999999999999999999999999999853 56899999999999999999999999988776544
No 19
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=5.5e-19 Score=124.46 Aligned_cols=61 Identities=41% Similarity=0.632 Sum_probs=56.0
Q ss_pred CccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCC--CChHHHHHHHHHHHHHcCChhHHHH
Q psy15361 44 KETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKN--PNEGEKFKQISMAYEVLSNPEKREL 104 (178)
Q Consensus 44 ~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~--~~~~~~f~~I~~Ay~vL~d~~~R~~ 104 (178)
...|||+||||+++++.++||++||+|++++|||++ +++.++|+.|++||++|+|+.+|+.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 357999999999999999999999999999999998 5678999999999999999988753
No 20
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.73 E-value=9.5e-19 Score=120.52 Aligned_cols=61 Identities=13% Similarity=0.286 Sum_probs=56.2
Q ss_pred ccCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhc
Q psy15361 45 ETTFYDILGVKPN--CTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYD 106 (178)
Q Consensus 45 ~~d~Y~vLgv~~~--as~~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD 106 (178)
..++|+||||+++ ++.++||++||+|++++|||+++. .++|++|++||++|+++.+|..++
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~-~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 4589999999999 999999999999999999999765 589999999999999999998854
No 21
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.73 E-value=2.6e-19 Score=131.54 Aligned_cols=64 Identities=25% Similarity=0.394 Sum_probs=59.7
Q ss_pred ccCchhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhcccc
Q psy15361 45 ETTFYDILGVKPNCTQ--DELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQGA 109 (178)
Q Consensus 45 ~~d~Y~vLgv~~~as~--~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~~~ 109 (178)
..+||+||||+++++. ++||++||+|++++|||+++. .++|++|++||+||+||.+|+.||..+
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-~e~f~~I~~AYevL~d~~~R~~~~~~~ 72 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-EEKMKKMNTLYKKMEDGVKYAHQPDFG 72 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-TTTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-HHHHHHHHHHHHHHCCHHHHHHhhhcc
Confidence 4589999999999998 999999999999999999876 589999999999999999999999755
No 22
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.72 E-value=4e-19 Score=139.17 Aligned_cols=66 Identities=26% Similarity=0.408 Sum_probs=58.6
Q ss_pred CccCchhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhccccc
Q psy15361 44 KETTFYDILGVKPNCT--QDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQGAS 110 (178)
Q Consensus 44 ~~~d~Y~vLgv~~~as--~~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~ 110 (178)
...+||+||||+++++ .++||+|||++++++|||++++. ++|++|++||++|+||.+|+.||.+|.
T Consensus 9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~-e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE-EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC-TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH-HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 3568999999999998 69999999999999999998764 899999999999999999999999875
No 23
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.70 E-value=8.3e-18 Score=131.74 Aligned_cols=66 Identities=23% Similarity=0.456 Sum_probs=59.3
Q ss_pred ccCchhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCh--------HHHHHHHHHHHHHcCChhHHHHhccccc
Q psy15361 45 ETTFYDILGVKPNCT--QDELKKAYRKLALKYHPDKNPNE--------GEKFKQISMAYEVLSNPEKRELYDQGAS 110 (178)
Q Consensus 45 ~~d~Y~vLgv~~~as--~~eIK~aYr~l~~~~HPDk~~~~--------~~~f~~I~~Ay~vL~d~~~R~~YD~~~~ 110 (178)
..|||+||||+++++ .++||++||++++++|||++++. .+.|..|++||++|+||.+|..||....
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 469999999999887 99999999999999999998543 3689999999999999999999998654
No 24
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.69 E-value=2e-17 Score=132.87 Aligned_cols=74 Identities=22% Similarity=0.376 Sum_probs=62.1
Q ss_pred hhhcCCCCCCCCCccCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCh--------HHHHHHHHHHHHHcCChhH
Q psy15361 32 IEACLPPRPNMVKETTFYDILGVKPN--CTQDELKKAYRKLALKYHPDKNPNE--------GEKFKQISMAYEVLSNPEK 101 (178)
Q Consensus 32 ~~~~~~~~~~~~~~~d~Y~vLgv~~~--as~~eIK~aYr~l~~~~HPDk~~~~--------~~~f~~I~~Ay~vL~d~~~ 101 (178)
+....+|.. ..|||+||||+++ ++.++||++||+|++++|||++++. .++|+.|++||++|+||.+
T Consensus 33 c~~~q~~~~----~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~ 108 (207)
T 3bvo_A 33 CRALQAPDP----TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLS 108 (207)
T ss_dssp TCCBCCCCT----TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred ccccCCCCC----CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
Confidence 334445542 5699999999986 7899999999999999999998642 3579999999999999999
Q ss_pred HHHhcccc
Q psy15361 102 RELYDQGA 109 (178)
Q Consensus 102 R~~YD~~~ 109 (178)
|+.||...
T Consensus 109 R~~Yd~~l 116 (207)
T 3bvo_A 109 RGLYLLKL 116 (207)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999644
No 25
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.69 E-value=1.3e-17 Score=130.24 Aligned_cols=64 Identities=22% Similarity=0.430 Sum_probs=58.7
Q ss_pred CchhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCh--------HHHHHHHHHHHHHcCChhHHHHhccccc
Q psy15361 47 TFYDILGVKPNC--TQDELKKAYRKLALKYHPDKNPNE--------GEKFKQISMAYEVLSNPEKRELYDQGAS 110 (178)
Q Consensus 47 d~Y~vLgv~~~a--s~~eIK~aYr~l~~~~HPDk~~~~--------~~~f~~I~~Ay~vL~d~~~R~~YD~~~~ 110 (178)
|||+||||++++ +..+||++||++++++|||++++. .++|..|++||++|+||.+|..||....
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 799999999999 999999999999999999998653 3589999999999999999999998654
No 26
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.69 E-value=2e-18 Score=147.44 Aligned_cols=71 Identities=41% Similarity=0.679 Sum_probs=0.0
Q ss_pred CCCCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--hHHHHHHHHHHHHHcCChhHHHHhccccc
Q psy15361 40 PNMVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN--EGEKFKQISMAYEVLSNPEKRELYDQGAS 110 (178)
Q Consensus 40 ~~~~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~--~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~ 110 (178)
.+.+...|||+||||+++|+.++||+|||+|+++||||+++. ++++|++|++||++|+||.+|+.||.++.
T Consensus 22 ~~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 94 (329)
T 3lz8_A 22 SNAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ 94 (329)
T ss_dssp -------------------------------------------------------------------------
T ss_pred cccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence 344667899999999999999999999999999999999854 56899999999999999999999998744
No 27
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.68 E-value=7.6e-18 Score=118.36 Aligned_cols=61 Identities=28% Similarity=0.333 Sum_probs=55.5
Q ss_pred CCCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHHcCChhHH
Q psy15361 42 MVKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN----EGEKFKQISMAYEVLSNPEKR 102 (178)
Q Consensus 42 ~~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~----~~~~f~~I~~Ay~vL~d~~~R 102 (178)
.+...++|+||||+++++.++||++||+|+++||||++++ +.++|+.|++||++|++...|
T Consensus 12 ~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 12 GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp SSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 3556799999999999999999999999999999999976 368999999999999988666
No 28
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.65 E-value=2.3e-17 Score=111.32 Aligned_cols=59 Identities=25% Similarity=0.314 Sum_probs=52.7
Q ss_pred CCccCchhhcCCCC-CCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHH
Q psy15361 43 VKETTFYDILGVKP-NCTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKR 102 (178)
Q Consensus 43 ~~~~d~Y~vLgv~~-~as~~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R 102 (178)
+...++|+||||++ +++.++||++||+|++++|||++ ++.+.|++|++||++|+++..|
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~-g~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG-GSPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT-CCHHHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHhhhhhc
Confidence 45679999999999 79999999999999999999996 4558999999999999987544
No 29
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.65 E-value=4.9e-17 Score=128.18 Aligned_cols=68 Identities=28% Similarity=0.470 Sum_probs=61.4
Q ss_pred ccCchhhc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhccccccc
Q psy15361 45 ETTFYDIL------GVKP-NCTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQGASCL 112 (178)
Q Consensus 45 ~~d~Y~vL------gv~~-~as~~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~ 112 (178)
..|||+|| |+++ +++.++||++||+|++++|||+++++.++|..|++||++|+||.+|..||..+..|
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~~g 84 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYMLKLLRN 84 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHHHHHHC
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHHHHHhC
Confidence 56999999 4665 89999999999999999999999877789999999999999999999999866333
No 30
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.63 E-value=5.5e-17 Score=127.82 Aligned_cols=60 Identities=30% Similarity=0.488 Sum_probs=55.8
Q ss_pred cCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC------hHHHHHHHHHHHHHcCChhHHHHh
Q psy15361 46 TTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN------EGEKFKQISMAYEVLSNPEKRELY 105 (178)
Q Consensus 46 ~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~------~~~~f~~I~~Ay~vL~d~~~R~~Y 105 (178)
.+||+||||++.++.++||++||++++++|||++++ +.++|+.|++||++|+|+.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 699999999999999999999999999999999854 457899999999999999999876
No 31
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.61 E-value=1.3e-16 Score=112.80 Aligned_cols=53 Identities=28% Similarity=0.411 Sum_probs=48.5
Q ss_pred cCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC------hHHHHHHHHHHHHHcCC
Q psy15361 46 TTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN------EGEKFKQISMAYEVLSN 98 (178)
Q Consensus 46 ~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~------~~~~f~~I~~Ay~vL~d 98 (178)
.++|++|||++.++.++||+|||++++++|||++++ ++++|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999865 35789999999999964
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.60 E-value=1.9e-16 Score=114.76 Aligned_cols=57 Identities=16% Similarity=0.277 Sum_probs=50.5
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----------hHHHHHHHHHHHHHcCChh
Q psy15361 43 VKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN----------EGEKFKQISMAYEVLSNPE 100 (178)
Q Consensus 43 ~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~----------~~~~f~~I~~Ay~vL~d~~ 100 (178)
+...+||+|||++. ++.++||+|||++++++|||+++. ++++|+.|++||++|+|+.
T Consensus 38 ~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 38 WSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp CTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 33579999999996 999999999999999999999742 2678999999999999975
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.58 E-value=2e-16 Score=146.52 Aligned_cols=75 Identities=39% Similarity=0.654 Sum_probs=40.8
Q ss_pred CCccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHHcCChhHHHHhccccccccCCCC
Q psy15361 43 VKETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPN---EGEKFKQISMAYEVLSNPEKRELYDQGASCLMAPLG 117 (178)
Q Consensus 43 ~~~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~---~~~~f~~I~~Ay~vL~d~~~R~~YD~~~~~~~~~~~ 117 (178)
....|||+||||+++|+.++||+|||+|++++|||++++ +.++|++|++||++|+||.+|+.||++|..++..+.
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~ 95 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ 95 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC---------
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCC
Confidence 446799999999999999999999999999999999853 467899999999999999999999999988765443
No 34
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.06 E-value=9.9e-11 Score=77.47 Aligned_cols=52 Identities=15% Similarity=0.095 Sum_probs=46.6
Q ss_pred cCchhhcCCCCC---CCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCC
Q psy15361 46 TTFYDILGVKPN---CTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSN 98 (178)
Q Consensus 46 ~d~Y~vLgv~~~---as~~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d 98 (178)
...|.||||+++ ++.++|+++||+|...+|||++ ++.....+|++|+++|..
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG-GS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG-GSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT-CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHH
Confidence 467899999999 9999999999999999999995 455889999999999864
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.03 E-value=1.5e-10 Score=97.36 Aligned_cols=63 Identities=54% Similarity=0.875 Sum_probs=53.1
Q ss_pred cCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh------HHHHHHHHHHHHHcCChhHHHHhccc
Q psy15361 46 TTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNE------GEKFKQISMAYEVLSNPEKRELYDQG 108 (178)
Q Consensus 46 ~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~------~~~f~~I~~Ay~vL~d~~~R~~YD~~ 108 (178)
.++|.+||+.+.++.++|+++|+++++++|||+.+.. .++|+.|++||++|+|+.+|..||.+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~g 450 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDG 450 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC------
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccCC
Confidence 4899999999999999999999999999999998753 46899999999999999999999963
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=90.77 E-value=0.13 Score=46.57 Aligned_cols=46 Identities=20% Similarity=0.239 Sum_probs=36.9
Q ss_pred ccCchhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHH
Q psy15361 45 ETTFYDILGVKPNCTQ--DELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEV 95 (178)
Q Consensus 45 ~~d~Y~vLgv~~~as~--~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~v 95 (178)
.++||.+||++.+... .+|+++||++++..+++ .+++..|..|+.|
T Consensus 628 ~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-----~~r~~lvd~a~~v 675 (681)
T 2pzi_A 628 KASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-----RHRYTLVDMANKV 675 (681)
T ss_dssp CCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-----HHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-----HHHHHHHHHhccc
Confidence 4469999999776544 67999999999966544 5889999999876
No 37
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=49.79 E-value=34 Score=21.39 Aligned_cols=49 Identities=14% Similarity=0.241 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCChHHHHHHH---HHHHHHcCC-hh-HHHHhcccc
Q psy15361 61 DELKKAYRKLALKYHPDKNPNEGEKFKQI---SMAYEVLSN-PE-KRELYDQGA 109 (178)
Q Consensus 61 ~eIK~aYr~l~~~~HPDk~~~~~~~f~~I---~~Ay~vL~d-~~-~R~~YD~~~ 109 (178)
+|..++|.+|.+...=|..-.=+..+..| .--|.+|.| |. ++..|+.+.
T Consensus 3 eEae~aF~~lL~~~~V~s~wsweqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~ 56 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWSFSRIISELGTRDPRYWMVDDDPLWKKEMFEKYL 56 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCcHHHHHHHhccCCCccccccCCHHHHHHHHHHHH
Confidence 56789999999988666554445667777 467999997 66 557887654
No 38
>2d7l_A WD repeat and HMG-box DNA binding protein 1; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.33 E-value=36 Score=22.16 Aligned_cols=43 Identities=23% Similarity=0.354 Sum_probs=33.7
Q ss_pred HHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhccc
Q psy15361 65 KAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQG 108 (178)
Q Consensus 65 ~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~~ 108 (178)
+.+|..++.-||+.. +..+..+.|.+.|..|++.++....+..
T Consensus 18 ~e~R~~ik~~~P~~~-~~~eisK~lge~Wk~ls~eeK~~y~~~A 60 (81)
T 2d7l_A 18 EENRSNILSDNPDFS-DEADIIKEGMIRFRVLSTEERKVWANKA 60 (81)
T ss_dssp HHHHHHHHHHCTTCC-SHHHHHHHHHHHHSSSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCc-hhHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 556777888899985 5678999999999999977776555543
No 39
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=43.12 E-value=56 Score=20.01 Aligned_cols=41 Identities=32% Similarity=0.325 Sum_probs=30.6
Q ss_pred HHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhc
Q psy15361 66 AYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYD 106 (178)
Q Consensus 66 aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD 106 (178)
..|..++.-||+...+..+..+.|.+.|..|++.++....+
T Consensus 15 ~~r~~~~~~~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~ 55 (71)
T 1ckt_A 15 TCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 55 (71)
T ss_dssp HHHHHHHHHCTTCCCCHHHHHHHHHHHHHTCCTTTSHHHHH
T ss_pred HHHHHHHHHCCCCCCcHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 44555667799876555688999999999999877655444
No 40
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.49 E-value=47 Score=21.43 Aligned_cols=42 Identities=24% Similarity=0.247 Sum_probs=31.4
Q ss_pred HHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhc
Q psy15361 65 KAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYD 106 (178)
Q Consensus 65 ~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD 106 (178)
+..|..++.-||+...+..+..+.|.+.|..|++.++....+
T Consensus 28 ~~~r~~~k~~~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~ 69 (86)
T 2eqz_A 28 QTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 69 (86)
T ss_dssp HHHHHHHHHHCTTSCCCHHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 455666677899986556788999999999999776654444
No 41
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=34.07 E-value=77 Score=19.25 Aligned_cols=41 Identities=27% Similarity=0.355 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhc
Q psy15361 64 KKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYD 106 (178)
Q Consensus 64 K~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD 106 (178)
.+.++..++.-||+.. ..+..+.|.+.|..|++.++....+
T Consensus 14 ~~~~r~~~~~~~p~~~--~~eisk~lg~~Wk~ls~~eK~~y~~ 54 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH--NAELSKMLGKSWKALTLAEKRPFVE 54 (71)
T ss_dssp HHHHHHHHHTTCTTSC--HHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC--HHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 3556777788888864 4578889999999999776654444
No 42
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=28.22 E-value=1.1e+02 Score=19.16 Aligned_cols=49 Identities=22% Similarity=0.308 Sum_probs=35.6
Q ss_pred ccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhc
Q psy15361 45 ETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYD 106 (178)
Q Consensus 45 ~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD 106 (178)
+.+.|-++ .+.++..++.-||+.. ..+..+.|.+.|..|++.++....+
T Consensus 10 P~~af~lf-----------~~~~r~~~~~~~p~~~--~~eisk~lg~~Wk~ls~~eK~~y~~ 58 (83)
T 3f27_D 10 PMNAFMVW-----------AKDERKRLAQQNPDLH--NAELSKMLGKSWKALTLAEKRPFVE 58 (83)
T ss_dssp CCCHHHHH-----------HHHHHHHHHHHCSSSC--HHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CCCHHHHH-----------HHHHHHHHHHHCCCCC--HHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 34666666 3566777788899864 4688899999999999776654444
No 43
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=26.26 E-value=32 Score=25.16 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=28.2
Q ss_pred CchhhcCCCCCCCHHHHHHHHHHHHHHhCCCC
Q psy15361 47 TFYDILGVKPNCTQDELKKAYRKLALKYHPDK 78 (178)
Q Consensus 47 d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk 78 (178)
-++..|-|....+.++++++=..+..++||+=
T Consensus 33 ~~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 33 KLLKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hhhcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 44788888888999999999999999999984
No 44
>1r5q_A KAI A, circadian oscillation regulator; four-helix-bundle, gene regulation; 2.00A {Nostoc SP} SCOP: a.186.1.1
Probab=25.59 E-value=1.4e+02 Score=20.56 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHH
Q psy15361 60 QDELKKAYRKLALKYHPDKNPNEGEKFKQISMAY 93 (178)
Q Consensus 60 ~~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay 93 (178)
.+++|..||.+.+.|--+-..-+...=+.||.|+
T Consensus 11 l~~L~~~YR~ill~YF~~d~~~n~~Id~fVn~aF 44 (102)
T 1r5q_A 11 LQQLKSDYRQILLSYFTTDKALKEKIDKFINAVF 44 (102)
T ss_dssp HHHHHHHHHHHHHHTTSCC--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 3578999999999998776555555555566665
No 45
>2yrq_A High mobility group protein B1; HMG box domain, DNA binding, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.27 E-value=1.3e+02 Score=21.83 Aligned_cols=42 Identities=31% Similarity=0.329 Sum_probs=32.0
Q ss_pred HHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhc
Q psy15361 65 KAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYD 106 (178)
Q Consensus 65 ~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD 106 (178)
+.+|..++.-||+..-...+..+.|.+.|..|++.++....+
T Consensus 28 ~~~r~~~k~~~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~ 69 (173)
T 2yrq_A 28 QTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 69 (173)
T ss_dssp HHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 455666777899965456788999999999999877655444
No 46
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=24.87 E-value=1.3e+02 Score=18.90 Aligned_cols=41 Identities=24% Similarity=0.416 Sum_probs=31.0
Q ss_pred HHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhcc
Q psy15361 65 KAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQ 107 (178)
Q Consensus 65 ~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~ 107 (178)
+.++..++.-||+.. ..+..+.|.+.|..|++.++...++.
T Consensus 17 ~~~r~~~~~~~p~~~--~~eisk~lg~~Wk~ls~eeK~~y~~~ 57 (81)
T 1i11_A 17 KDERRKILQAFPDMH--NSNISKILGSRWKAMTNLEKQPYYEE 57 (81)
T ss_dssp HHHHHHHHTTCSSCC--HHHHHHHHHHHHTTSCSGGGHHHHHH
T ss_pred HHHHHHHHHHCCCCC--HHHHHHHHHhhhhhCCHHHHHHHHHH
Confidence 455666777788864 56888999999999998877665554
No 47
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=24.25 E-value=1.5e+02 Score=19.18 Aligned_cols=41 Identities=24% Similarity=0.276 Sum_probs=30.9
Q ss_pred HHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhcc
Q psy15361 65 KAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQ 107 (178)
Q Consensus 65 ~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~ 107 (178)
+.+|..++.-||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 20 ~~~r~~~~~~~p~~~--~~eisk~lg~~Wk~ls~eeK~~Y~~~ 60 (92)
T 2crj_A 20 NERREQIRTRHPDLP--FPEITKMLGAEWSKLQPAEKQRYLDE 60 (92)
T ss_dssp HHHHHHHHHHCTTCC--HHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHCCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 456666777899864 56888999999999998877555543
No 48
>3nm9_A HMG-D, high mobility group protein D; DNA bending, non-sequence-specific, HMG chromosomal protein; HET: DNA; 2.85A {Drosophila melanogaster} SCOP: a.21.1.1 PDB: 1e7j_A* 1hma_A 1qrv_A*
Probab=23.71 E-value=1.3e+02 Score=18.42 Aligned_cols=37 Identities=11% Similarity=0.171 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhc
Q psy15361 65 KAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYD 106 (178)
Q Consensus 65 ~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD 106 (178)
+.+|..++.-||+.. ..+..+.|.+.|..|++ |..|.
T Consensus 16 ~~~r~~~~~~~p~~~--~~eisk~lg~~Wk~ls~---K~~y~ 52 (73)
T 3nm9_A 16 NSARESIKRENPGIK--VTEVAKRGGELWRAMKD---KSEWE 52 (73)
T ss_dssp HHHHHHHHHHSSSCC--HHHHHHHHHHHHHHCSC---CHHHH
T ss_pred HHHHHHHHHHCCCCC--HHHHHHHHHHHHHcCCc---hHHHH
Confidence 456667777899874 46888999999999987 55554
No 49
>2cs1_A PMS1 protein homolog 1; DNA mismatch repair protein PMS1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.55 E-value=1.4e+02 Score=19.38 Aligned_cols=41 Identities=22% Similarity=0.213 Sum_probs=30.1
Q ss_pred HHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhcc
Q psy15361 65 KAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQ 107 (178)
Q Consensus 65 ~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~ 107 (178)
+..|..++.-||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 20 ~~~r~~~~~~~p~~~--~~eisk~lg~~Wk~ls~eeK~~y~~~ 60 (92)
T 2cs1_A 20 QDHRPQFLIENPKTS--LEDATLQIEELWKTLSEEEKLKYEEK 60 (92)
T ss_dssp HHHHHHHHHHCCSSC--HHHHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCC--HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 455666777899863 46888999999999997766554443
No 50
>1v2z_A Circadian clock protein KAIA homolog; all alpha, riken structural genomics/proteomics initiative, structural genomics; 1.80A {Thermosynechococcus elongatus} SCOP: a.186.1.1 PDB: 1q6a_A 1q6b_A 1suy_A 1sv1_A
Probab=21.42 E-value=1.5e+02 Score=20.63 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHH
Q psy15361 60 QDELKKAYRKLALKYHPDKNPNEGEKFKQISMAY 93 (178)
Q Consensus 60 ~~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay 93 (178)
.+++|..||.+.+.|--+-..-+...=+.||.|+
T Consensus 18 l~~L~~~YR~ill~YF~~d~~~nq~Id~FVn~aF 51 (111)
T 1v2z_A 18 LDELRSIYRTIVLEYFNTDAKVNERIDEFVSKAF 51 (111)
T ss_dssp HHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 4679999999999998776555544445566665
No 51
>1aab_A High mobility group protein; HMG-BOX, DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1
Probab=21.27 E-value=55 Score=20.88 Aligned_cols=42 Identities=31% Similarity=0.318 Sum_probs=29.9
Q ss_pred HHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhc
Q psy15361 65 KAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYD 106 (178)
Q Consensus 65 ~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD 106 (178)
+..|..++.-||+...+..+..+.|.+.|..|++.++....+
T Consensus 20 ~~~r~~~~~~~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~ 61 (83)
T 1aab_A 20 QTSREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 (83)
T ss_dssp HHHHHHHTTSCTTTCCCSSSSHHHHHHHHTTSCTTHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 455666667789875433477889999999999877655444
No 52
>1wgf_A Upstream binding factor 1; transcription factor, DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=21.21 E-value=1.5e+02 Score=19.17 Aligned_cols=50 Identities=16% Similarity=0.195 Sum_probs=35.8
Q ss_pred ccCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCChhHHHHhcc
Q psy15361 45 ETTFYDILGVKPNCTQDELKKAYRKLALKYHPDKNPNEGEKFKQISMAYEVLSNPEKRELYDQ 107 (178)
Q Consensus 45 ~~d~Y~vLgv~~~as~~eIK~aYr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~ 107 (178)
+.+.|-++ -+.+|..++.-||+. ...+..+.|.+.|..|++.++....+.
T Consensus 24 P~say~lF-----------~~~~r~~~k~~~P~~--~~~eisk~lg~~Wk~ls~eeK~~Y~~~ 73 (90)
T 1wgf_A 24 PVSAMFIF-----------SEEKRRQLQEERPEL--SESELTRLLARMWNDLSEKKKAKYKAR 73 (90)
T ss_dssp CCCHHHHH-----------HHHTHHHHHHHCTTS--CHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred CCCHHHHH-----------HHHHHHHHHHHCCCC--CHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 45677666 245566677788985 356888999999999997766555554
Done!