Query psy15362
Match_columns 200
No_of_seqs 214 out of 1163
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 18:58:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15362.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15362hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gyw_A UDP-N-acetylglucosamine 100.0 1.2E-36 4E-41 282.1 15.2 199 2-200 472-670 (723)
2 3q3e_A HMW1C-like glycosyltran 100.0 2.5E-31 8.7E-36 240.2 16.1 158 42-200 428-590 (631)
3 2vsy_A XCC0866; transferase, g 100.0 3.1E-27 1.1E-31 211.5 18.2 158 41-199 365-523 (568)
4 2x6q_A Trehalose-synthase TRET 99.9 2.2E-23 7.5E-28 179.5 16.9 174 14-199 197-380 (416)
5 3c48_A Predicted glycosyltrans 99.9 2.5E-23 8.6E-28 179.8 15.8 172 14-199 211-392 (438)
6 3okp_A GDP-mannose-dependent a 99.9 2.9E-23 9.9E-28 176.3 15.6 168 14-199 166-345 (394)
7 2bfw_A GLGA glycogen synthase; 99.9 3.3E-23 1.1E-27 161.6 14.7 167 16-199 2-182 (200)
8 3oy2_A Glycosyltransferase B73 99.9 2.5E-23 8.5E-28 178.8 12.8 170 13-199 157-356 (413)
9 3fro_A GLGA glycogen synthase; 99.9 3.1E-22 1E-26 172.0 16.8 173 14-200 215-398 (439)
10 2r60_A Glycosyl transferase, g 99.9 5.4E-23 1.8E-27 181.5 11.3 173 14-199 224-425 (499)
11 2iw1_A Lipopolysaccharide core 99.9 1.2E-22 4E-27 171.6 11.6 169 14-199 163-338 (374)
12 2jjm_A Glycosyl transferase, g 99.9 3.5E-22 1.2E-26 170.8 11.5 165 14-199 182-351 (394)
13 3s28_A Sucrose synthase 1; gly 99.8 3E-21 1E-25 180.5 12.2 179 14-199 522-735 (816)
14 1rzu_A Glycogen synthase 1; gl 99.8 1.7E-20 5.8E-25 164.6 14.3 174 14-199 242-444 (485)
15 2qzs_A Glycogen synthase; glyc 99.8 1.8E-20 6.1E-25 164.4 14.0 174 14-199 242-445 (485)
16 2f9f_A First mannosyl transfer 99.8 1.2E-20 4.2E-25 145.5 10.8 144 45-200 15-164 (177)
17 2gek_A Phosphatidylinositol ma 99.8 1.6E-20 5.4E-25 160.2 10.6 159 15-199 185-350 (406)
18 3vue_A GBSS-I, granule-bound s 99.8 7E-20 2.4E-24 164.6 10.8 143 14-161 276-434 (536)
19 3qhp_A Type 1 capsular polysac 99.8 1.7E-19 5.9E-24 136.6 10.8 135 53-199 2-141 (166)
20 2iuy_A Avigt4, glycosyltransfe 99.8 6.8E-19 2.3E-23 147.7 15.0 152 13-196 140-306 (342)
21 2x0d_A WSAF; GT4 family, trans 99.8 2.8E-19 9.6E-24 155.7 12.6 130 55-200 243-381 (413)
22 1uqt_A Alpha, alpha-trehalose- 99.8 2.6E-18 8.7E-23 152.7 12.1 171 14-199 222-420 (482)
23 2hy7_A Glucuronosyltransferase 99.8 4.1E-18 1.4E-22 147.7 11.7 142 13-200 199-354 (406)
24 3beo_A UDP-N-acetylglucosamine 99.7 3.1E-17 1.1E-21 138.6 12.3 160 15-199 177-343 (375)
25 3t5t_A Putative glycosyltransf 99.7 5.1E-17 1.7E-21 144.3 13.0 167 14-199 252-439 (496)
26 1vgv_A UDP-N-acetylglucosamine 99.7 1.5E-16 5.2E-21 135.0 10.2 143 42-199 193-343 (384)
27 2xci_A KDO-transferase, 3-deox 99.7 3.7E-16 1.3E-20 134.2 11.8 138 55-198 198-346 (374)
28 1f0k_A MURG, UDP-N-acetylgluco 99.6 8E-16 2.7E-20 129.6 10.6 157 14-195 157-322 (364)
29 1v4v_A UDP-N-acetylglucosamine 99.6 8.2E-15 2.8E-19 124.2 10.9 135 51-199 197-335 (376)
30 3nb0_A Glycogen [starch] synth 99.5 1E-13 3.5E-18 126.5 9.3 61 100-161 477-551 (725)
31 3dzc_A UDP-N-acetylglucosamine 99.5 4.6E-13 1.6E-17 115.7 12.2 145 41-199 217-368 (396)
32 3ot5_A UDP-N-acetylglucosamine 99.4 1.4E-12 4.7E-17 113.1 9.7 142 42-199 216-362 (403)
33 4hwg_A UDP-N-acetylglucosamine 99.3 3.1E-11 1.1E-15 104.1 12.0 144 41-200 192-344 (385)
34 3otg_A CALG1; calicheamicin, T 99.2 2.7E-10 9.3E-15 97.2 11.8 135 50-199 240-377 (412)
35 2o6l_A UDP-glucuronosyltransfe 99.1 1.1E-09 3.9E-14 83.0 13.7 132 51-199 20-155 (170)
36 2iyf_A OLED, oleandomycin glyc 99.1 1E-09 3.4E-14 94.6 11.3 134 51-199 231-368 (430)
37 3tsa_A SPNG, NDP-rhamnosyltran 99.1 5.5E-10 1.9E-14 94.9 9.5 133 51-199 217-357 (391)
38 3ia7_A CALG4; glycosysltransfe 99.0 3.3E-09 1.1E-13 89.9 11.4 135 50-199 229-367 (402)
39 3rhz_A GTF3, nucleotide sugar 98.9 1.5E-09 5.2E-14 92.1 8.0 119 50-195 175-301 (339)
40 3rsc_A CALG2; TDP, enediyne, s 98.9 1.3E-08 4.4E-13 87.1 12.2 135 50-199 245-382 (415)
41 3s2u_A UDP-N-acetylglucosamine 98.9 7.6E-09 2.6E-13 88.2 10.0 148 43-200 170-326 (365)
42 4fzr_A SSFS6; structural genom 98.8 6.5E-09 2.2E-13 88.7 8.2 133 51-199 226-369 (398)
43 2p6p_A Glycosyl transferase; X 98.8 3.3E-08 1.1E-12 83.7 10.5 132 51-199 209-348 (384)
44 2iya_A OLEI, oleandomycin glyc 98.7 1.7E-07 5.8E-12 80.5 11.7 133 51-199 254-390 (424)
45 2yjn_A ERYCIII, glycosyltransf 98.6 5.9E-08 2E-12 84.1 7.9 129 51-199 266-404 (441)
46 3oti_A CALG3; calicheamicin, T 98.6 7E-08 2.4E-12 82.3 6.1 93 51-159 231-326 (398)
47 1iir_A Glycosyltransferase GTF 98.5 1.4E-06 4.7E-11 74.9 11.5 127 53-199 239-369 (415)
48 1rrv_A Glycosyltransferase GTF 98.3 5.1E-06 1.7E-10 71.2 11.7 128 53-199 238-370 (416)
49 3h4t_A Glycosyltransferase GTF 98.2 1.7E-05 5.7E-10 68.0 11.7 129 51-197 220-351 (404)
50 4amg_A Snogd; transferase, pol 98.1 8.9E-06 3E-10 68.8 7.6 94 51-159 236-331 (400)
51 2acv_A Triterpene UDP-glucosyl 97.9 0.00035 1.2E-08 61.2 15.4 138 51-197 275-424 (463)
52 3hbf_A Flavonoid 3-O-glucosylt 97.9 0.00017 5.8E-09 63.3 13.2 100 50-160 271-373 (454)
53 2c1x_A UDP-glucose flavonoid 3 97.9 7.4E-05 2.5E-09 65.4 10.5 136 51-198 270-412 (456)
54 1psw_A ADP-heptose LPS heptosy 97.9 7.6E-05 2.6E-09 62.2 10.1 116 40-162 167-290 (348)
55 2pq6_A UDP-glucuronosyl/UDP-gl 97.8 0.00071 2.4E-08 59.4 15.8 138 51-199 294-440 (482)
56 3hbm_A UDP-sugar hydrolase; PS 97.6 0.00035 1.2E-08 57.6 9.3 66 84-159 186-251 (282)
57 3tov_A Glycosyl transferase fa 97.4 0.0016 5.4E-08 54.9 11.7 114 45-167 177-295 (349)
58 2c4m_A Glycogen phosphorylase; 97.4 0.0027 9.3E-08 59.0 14.0 118 43-161 504-650 (796)
59 2vch_A Hydroquinone glucosyltr 97.4 0.0027 9.1E-08 55.8 13.6 101 51-160 267-385 (480)
60 1l5w_A Maltodextrin phosphoryl 97.2 0.0046 1.6E-07 57.5 13.3 119 43-162 514-661 (796)
61 2jzc_A UDP-N-acetylglucosamine 97.1 0.0012 4E-08 52.6 7.1 46 111-161 115-161 (224)
62 2gj4_A Glycogen phosphorylase, 97.0 0.0064 2.2E-07 56.7 11.5 119 43-162 538-685 (824)
63 2gt1_A Lipopolysaccharide hept 96.6 0.011 3.7E-07 48.7 9.0 137 50-198 176-322 (326)
64 1ygp_A Yeast glycogen phosphor 91.8 2.6 8.9E-05 39.6 12.7 111 51-162 598-744 (879)
65 4had_A Probable oxidoreductase 89.7 1.5 5.3E-05 36.0 8.6 75 75-158 41-116 (350)
66 4fb5_A Probable oxidoreductase 89.3 0.36 1.2E-05 40.2 4.5 91 59-158 33-124 (393)
67 3l7i_A Teichoic acid biosynthe 88.7 0.48 1.6E-05 43.4 5.2 141 39-194 524-679 (729)
68 2l2q_A PTS system, cellobiose- 87.8 4.1 0.00014 27.9 8.5 75 81-159 3-83 (109)
69 3uuw_A Putative oxidoreductase 87.5 2 6.7E-05 34.8 7.6 74 73-158 22-96 (308)
70 3j20_B 30S ribosomal protein S 86.6 1.7 5.9E-05 33.7 6.4 89 68-158 51-140 (202)
71 4h3v_A Oxidoreductase domain p 83.0 1.1 3.8E-05 37.1 4.2 68 82-158 37-105 (390)
72 1vi6_A 30S ribosomal protein S 82.3 1.9 6.6E-05 33.6 4.9 79 79-158 65-144 (208)
73 3nbm_A PTS system, lactose-spe 81.6 2.3 8E-05 29.4 4.8 76 81-160 5-86 (108)
74 2xzm_B RPS0E; ribosome, transl 81.1 2.5 8.4E-05 33.7 5.3 89 68-159 52-144 (241)
75 1ydw_A AX110P-like protein; st 80.1 7 0.00024 32.2 8.1 76 77-158 25-101 (362)
76 3iz6_A 40S ribosomal protein S 80.0 1.5 5.1E-05 36.1 3.7 76 82-158 75-151 (305)
77 3db2_A Putative NADPH-dependen 78.2 14 0.00049 30.2 9.5 76 73-158 20-96 (354)
78 3mz0_A Inositol 2-dehydrogenas 78.0 7.8 0.00027 31.7 7.7 72 79-158 24-96 (344)
79 3e9m_A Oxidoreductase, GFO/IDH 77.1 16 0.00056 29.6 9.4 75 75-158 22-97 (330)
80 2hqs_H Peptidoglycan-associate 76.0 10 0.00036 26.1 6.9 52 67-118 22-86 (118)
81 2iz6_A Molybdenum cofactor car 75.2 5.3 0.00018 30.1 5.4 66 127-197 105-173 (176)
82 1vs1_A 3-deoxy-7-phosphoheptul 75.0 12 0.00039 30.3 7.7 80 96-179 92-175 (276)
83 1tvm_A PTS system, galactitol- 75.0 7.6 0.00026 26.8 5.9 64 82-157 21-90 (113)
84 3ezy_A Dehydrogenase; structur 74.6 13 0.00045 30.3 8.2 76 74-158 18-94 (344)
85 3euw_A MYO-inositol dehydrogen 74.3 11 0.00039 30.6 7.8 73 74-158 20-95 (344)
86 2ixa_A Alpha-N-acetylgalactosa 74.3 16 0.00055 31.1 8.9 78 77-158 39-121 (444)
87 3cea_A MYO-inositol 2-dehydrog 74.0 10 0.00036 30.8 7.4 71 79-158 30-101 (346)
88 3rc1_A Sugar 3-ketoreductase; 73.9 11 0.00039 30.9 7.7 73 75-157 45-118 (350)
89 2ho3_A Oxidoreductase, GFO/IDH 73.9 14 0.00049 29.8 8.2 75 74-158 17-92 (325)
90 3moi_A Probable dehydrogenase; 73.6 9 0.00031 32.0 7.0 72 77-158 22-94 (387)
91 1zh8_A Oxidoreductase; TM0312, 73.6 15 0.00052 30.0 8.3 73 77-158 38-112 (340)
92 1h6d_A Precursor form of gluco 73.3 6.5 0.00022 33.6 6.2 76 76-158 102-180 (433)
93 4hkt_A Inositol 2-dehydrogenas 73.1 19 0.00064 29.1 8.7 74 74-158 19-93 (331)
94 2aiz_P Outer membrane protein 72.8 12 0.00039 26.6 6.5 51 68-118 47-110 (134)
95 3u5c_A 40S ribosomal protein S 72.6 1.4 4.8E-05 35.4 1.6 76 82-158 70-146 (252)
96 3bch_A 40S ribosomal protein S 72.5 3.1 0.00011 33.4 3.6 76 82-158 104-180 (253)
97 2czc_A Glyceraldehyde-3-phosph 71.6 4.1 0.00014 33.6 4.4 81 73-159 17-110 (334)
98 3td3_A Outer membrane protein 71.0 19 0.00065 24.8 7.3 52 67-118 30-95 (123)
99 2kgw_A Outer membrane protein 70.8 11 0.00038 26.4 6.0 51 68-118 41-104 (129)
100 3v5n_A Oxidoreductase; structu 70.2 11 0.00037 31.9 6.8 76 77-158 59-140 (417)
101 2pln_A HP1043, response regula 70.2 22 0.00075 23.9 9.7 108 81-197 17-132 (137)
102 1xea_A Oxidoreductase, GFO/IDH 69.3 12 0.0004 30.3 6.6 74 74-158 19-93 (323)
103 3ohs_X Trans-1,2-dihydrobenzen 69.0 21 0.00073 28.8 8.2 76 74-158 18-96 (334)
104 1vli_A Spore coat polysacchari 68.1 27 0.00093 29.6 8.7 83 94-180 102-188 (385)
105 2zkq_b 40S ribosomal protein S 67.6 2.1 7E-05 35.2 1.6 90 68-158 57-147 (295)
106 3ec7_A Putative dehydrogenase; 67.5 14 0.00046 30.5 6.8 73 78-158 44-117 (357)
107 4gqa_A NAD binding oxidoreduct 67.0 29 0.00099 29.0 8.9 94 53-158 26-126 (412)
108 3q2i_A Dehydrogenase; rossmann 66.9 32 0.0011 28.0 9.0 71 78-158 33-105 (354)
109 3dty_A Oxidoreductase, GFO/IDH 66.8 8.6 0.0003 32.2 5.5 74 78-157 35-114 (398)
110 3u3x_A Oxidoreductase; structu 65.6 34 0.0012 28.1 8.9 69 81-158 49-118 (361)
111 3sz8_A 2-dehydro-3-deoxyphosph 64.0 40 0.0014 27.3 8.6 80 96-179 81-164 (285)
112 2glx_A 1,5-anhydro-D-fructose 63.3 39 0.0013 27.1 8.7 69 81-158 23-92 (332)
113 1vr6_A Phospho-2-dehydro-3-deo 63.1 23 0.00079 29.6 7.3 81 96-180 160-244 (350)
114 3oon_A Outer membrane protein 62.7 28 0.00094 23.9 6.7 52 67-118 33-98 (123)
115 1tlt_A Putative oxidoreductase 62.5 20 0.00069 28.7 6.8 71 76-158 24-95 (319)
116 1k68_A Phytochrome response re 62.1 31 0.0011 22.8 10.8 109 82-195 2-128 (140)
117 3fs2_A 2-dehydro-3-deoxyphosph 61.4 58 0.002 26.6 9.2 81 96-180 102-186 (298)
118 2k1s_A Inner membrane lipoprot 61.3 24 0.00083 25.3 6.4 51 68-118 51-114 (149)
119 2qkf_A 3-deoxy-D-manno-octulos 61.0 36 0.0012 27.4 7.9 80 96-179 76-159 (280)
120 3heb_A Response regulator rece 60.8 37 0.0013 23.2 10.7 109 83-196 5-133 (152)
121 1o60_A 2-dehydro-3-deoxyphosph 59.9 39 0.0013 27.4 7.9 81 96-180 79-163 (292)
122 4ekn_B Aspartate carbamoyltran 59.4 50 0.0017 27.0 8.6 106 11-136 116-225 (306)
123 3mm4_A Histidine kinase homolo 59.1 51 0.0018 24.3 9.3 109 82-196 61-194 (206)
124 3g8r_A Probable spore coat pol 59.0 28 0.00097 29.1 7.1 64 95-162 80-145 (350)
125 1zco_A 2-dehydro-3-deoxyphosph 58.4 30 0.001 27.5 7.0 80 96-179 77-160 (262)
126 3evn_A Oxidoreductase, GFO/IDH 58.3 8 0.00028 31.4 3.6 72 78-158 25-97 (329)
127 1e2b_A Enzyme IIB-cellobiose; 58.0 36 0.0012 23.0 6.4 70 84-157 5-80 (106)
128 3ldt_A Outer membrane protein, 58.0 27 0.00092 25.7 6.2 51 68-118 71-134 (169)
129 3nvt_A 3-deoxy-D-arabino-heptu 57.5 43 0.0015 28.3 8.1 62 96-161 196-258 (385)
130 3btv_A Galactose/lactose metab 55.1 24 0.00082 30.0 6.2 74 78-158 44-125 (438)
131 4fyk_A Deoxyribonucleoside 5'- 54.9 49 0.0017 24.2 7.0 35 124-158 63-100 (152)
132 2nvw_A Galactose/lactose metab 54.7 24 0.00083 30.5 6.3 75 77-158 62-144 (479)
133 3kht_A Response regulator; PSI 54.7 46 0.0016 22.4 10.5 110 82-196 5-126 (144)
134 1p9l_A Dihydrodipicolinate red 53.4 36 0.0012 26.8 6.6 32 129-160 45-78 (245)
135 1i1q_B Anthranilate synthase c 53.2 65 0.0022 23.7 8.0 72 84-158 2-82 (192)
136 3m2t_A Probable dehydrogenase; 53.2 10 0.00036 31.3 3.5 76 74-158 22-98 (359)
137 3u80_A 3-dehydroquinate dehydr 52.7 38 0.0013 24.8 6.0 59 96-157 36-104 (151)
138 3lua_A Response regulator rece 52.5 49 0.0017 22.1 9.5 109 82-197 4-126 (140)
139 3h1g_A Chemotaxis protein CHEY 52.5 48 0.0016 21.9 10.2 110 82-197 5-126 (129)
140 2zay_A Response regulator rece 51.8 52 0.0018 22.2 9.4 108 81-195 7-125 (147)
141 3lzd_A DPH2; diphthamide biosy 51.7 7.9 0.00027 32.8 2.5 80 73-158 255-341 (378)
142 3eag_A UDP-N-acetylmuramate:L- 51.5 53 0.0018 26.6 7.6 79 69-158 16-96 (326)
143 3e18_A Oxidoreductase; dehydro 51.2 39 0.0013 27.7 6.8 73 75-158 22-95 (359)
144 3ijp_A DHPR, dihydrodipicolina 50.2 12 0.00041 30.4 3.4 39 122-160 81-121 (288)
145 3don_A Shikimate dehydrogenase 50.2 24 0.00083 28.3 5.2 68 69-139 104-185 (277)
146 2yxb_A Coenzyme B12-dependent 50.0 70 0.0024 23.1 7.8 95 96-196 36-143 (161)
147 3csu_A Protein (aspartate carb 48.5 93 0.0032 25.4 8.5 104 13-136 121-228 (310)
148 3bbn_B Ribosomal protein S2; s 48.2 63 0.0022 25.3 7.1 31 129-159 157-187 (231)
149 1zud_1 Adenylyltransferase THI 47.9 48 0.0016 25.9 6.5 61 97-158 86-149 (251)
150 3to5_A CHEY homolog; alpha(5)b 47.8 68 0.0023 22.4 10.3 110 81-196 11-131 (134)
151 2wqp_A Polysialic acid capsule 47.7 30 0.001 28.9 5.4 64 95-162 93-158 (349)
152 3czc_A RMPB; alpha/beta sandwi 47.5 52 0.0018 22.2 5.9 54 82-138 18-76 (110)
153 2j48_A Two-component sensor ki 46.8 52 0.0018 20.7 7.2 104 83-196 2-116 (119)
154 3cyp_B Chemotaxis protein MOTB 46.8 39 0.0013 23.8 5.3 51 68-118 21-89 (138)
155 4dad_A Putative pilus assembly 46.8 63 0.0022 21.7 8.9 110 82-197 20-140 (146)
156 2nwr_A 2-dehydro-3-deoxyphosph 46.5 87 0.003 25.0 7.9 81 96-180 65-149 (267)
157 4gmf_A Yersiniabactin biosynth 45.7 49 0.0017 27.6 6.6 69 78-158 26-100 (372)
158 1r1m_A Outer membrane protein 45.7 50 0.0017 24.2 5.9 51 68-118 32-95 (164)
159 3jyo_A Quinate/shikimate dehyd 45.6 35 0.0012 27.3 5.5 48 69-119 114-161 (283)
160 1k66_A Phytochrome response re 45.4 65 0.0022 21.5 10.3 109 82-195 6-135 (149)
161 4f3y_A DHPR, dihydrodipicolina 45.3 9.8 0.00033 30.6 2.0 37 124-160 68-106 (272)
162 3ic5_A Putative saccharopine d 44.9 61 0.0021 21.0 9.3 81 74-161 21-102 (118)
163 2vxb_A DNA repair protein RHP9 44.6 54 0.0018 25.5 6.3 74 82-158 5-96 (241)
164 1rcu_A Conserved hypothetical 44.5 20 0.00069 27.3 3.6 69 126-195 115-192 (195)
165 3upl_A Oxidoreductase; rossman 43.7 38 0.0013 29.3 5.6 79 76-158 41-138 (446)
166 2x0j_A Malate dehydrogenase; o 43.4 55 0.0019 26.4 6.3 65 51-117 69-144 (294)
167 1i3c_A Response regulator RCP1 43.3 75 0.0026 21.5 10.5 109 81-194 7-133 (149)
168 4erh_A Outer membrane protein 43.2 54 0.0018 23.2 5.7 50 68-117 39-103 (148)
169 2uyg_A 3-dehydroquinate dehydr 42.9 71 0.0024 23.3 6.2 59 96-157 31-97 (149)
170 1b7g_O Protein (glyceraldehyde 42.7 1E+02 0.0035 25.3 8.0 83 73-161 16-110 (340)
171 1r0k_A 1-deoxy-D-xylulose 5-ph 41.7 1.3E+02 0.0045 25.4 8.6 29 130-158 94-123 (388)
172 3i23_A Oxidoreductase, GFO/IDH 41.6 41 0.0014 27.4 5.4 73 76-157 21-94 (349)
173 2f62_A Nucleoside 2-deoxyribos 41.5 28 0.00096 25.6 3.9 37 124-160 62-106 (161)
174 2hqr_A Putative transcriptiona 41.5 1E+02 0.0035 22.5 8.4 104 84-196 2-113 (223)
175 3grc_A Sensor protein, kinase; 41.5 75 0.0026 21.1 8.6 110 81-196 5-125 (140)
176 3dmy_A Protein FDRA; predicted 40.9 84 0.0029 27.4 7.4 94 96-197 126-236 (480)
177 2axq_A Saccharopine dehydrogen 40.7 1E+02 0.0036 26.5 8.0 76 77-158 42-118 (467)
178 4ina_A Saccharopine dehydrogen 40.2 96 0.0033 25.9 7.6 85 71-158 14-106 (405)
179 2b4a_A BH3024; flavodoxin-like 40.1 79 0.0027 20.9 6.8 107 80-197 13-130 (138)
180 2yq5_A D-isomer specific 2-hyd 40.0 95 0.0033 25.6 7.4 75 84-161 3-79 (343)
181 3kip_A 3-dehydroquinase, type 40.0 34 0.0012 25.5 4.1 58 97-157 47-114 (167)
182 3tml_A 2-dehydro-3-deoxyphosph 39.6 60 0.0021 26.3 5.9 62 96-161 78-140 (288)
183 3hn7_A UDP-N-acetylmuramate-L- 39.3 88 0.003 27.2 7.4 93 49-158 17-110 (524)
184 1nvm_B Acetaldehyde dehydrogen 39.1 54 0.0019 26.6 5.7 74 78-158 25-103 (312)
185 2d8m_A DNA-repair protein XRCC 38.5 96 0.0033 21.4 7.6 64 80-158 23-86 (129)
186 3aek_A Light-independent proto 38.5 1.8E+02 0.0062 24.6 9.5 87 67-158 165-256 (437)
187 3n8k_A 3-dehydroquinate dehydr 38.0 51 0.0017 24.6 4.8 59 96-157 60-125 (172)
188 4es6_A Uroporphyrinogen-III sy 37.7 74 0.0025 24.5 6.1 108 79-194 130-252 (254)
189 1t15_A Breast cancer type 1 su 37.5 1.2E+02 0.0042 22.3 7.3 65 81-158 3-71 (214)
190 1h05_A 3-dehydroquinate dehydr 37.4 63 0.0021 23.5 5.1 59 96-157 34-99 (146)
191 1vm6_A DHPR, dihydrodipicolina 37.4 53 0.0018 25.7 5.1 79 76-160 6-86 (228)
192 3fwy_A Light-independent proto 37.3 57 0.002 26.4 5.6 19 143-161 255-273 (314)
193 3hzh_A Chemotaxis response reg 37.3 98 0.0034 21.2 10.5 108 83-196 37-155 (157)
194 2z2v_A Hypothetical protein PH 37.1 65 0.0022 26.7 6.0 70 83-160 39-109 (365)
195 2qsj_A DNA-binding response re 37.0 96 0.0033 21.0 10.4 110 82-197 3-123 (154)
196 1uqr_A 3-dehydroquinate dehydr 36.8 58 0.002 23.9 4.9 59 96-157 33-98 (154)
197 2cok_A Poly [ADP-ribose] polym 35.9 96 0.0033 21.3 5.8 65 81-158 12-77 (113)
198 1l0b_A BRCA1; TANDEM-BRCT, thr 35.8 1.4E+02 0.0047 22.4 7.6 64 82-158 7-74 (229)
199 1gqo_A Dehydroquinase; dehydra 35.5 69 0.0024 23.2 5.1 59 96-157 32-97 (143)
200 3p9z_A Uroporphyrinogen III co 35.5 97 0.0033 23.5 6.4 110 81-198 109-227 (229)
201 1g60_A Adenine-specific methyl 35.5 37 0.0013 26.5 4.0 30 129-159 212-241 (260)
202 2qvg_A Two component response 35.4 96 0.0033 20.5 9.3 107 82-193 7-130 (143)
203 3lwz_A 3-dehydroquinate dehydr 35.4 57 0.002 23.9 4.6 58 97-157 40-104 (153)
204 2ohh_A Type A flavoprotein FPR 35.3 1.8E+02 0.006 23.7 8.5 104 53-157 227-348 (404)
205 3fbt_A Chorismate mutase and s 35.3 83 0.0028 25.2 6.1 54 81-139 121-188 (282)
206 2l26_A Uncharacterized protein 35.1 51 0.0018 26.5 4.9 52 66-117 186-250 (284)
207 3sqd_A PAX-interacting protein 34.8 80 0.0027 24.1 5.8 62 82-158 16-77 (219)
208 2p2s_A Putative oxidoreductase 34.8 1.3E+02 0.0045 23.9 7.5 69 81-158 27-96 (336)
209 3oqb_A Oxidoreductase; structu 34.7 1.1E+02 0.0039 24.9 7.1 58 94-158 55-113 (383)
210 3s0y_A Motility protein B; pep 34.5 1.4E+02 0.0048 22.1 7.1 71 67-137 75-171 (193)
211 1jr2_A Uroporphyrinogen-III sy 34.5 80 0.0027 24.8 6.0 109 81-197 156-281 (286)
212 2dc1_A L-aspartate dehydrogena 34.3 44 0.0015 25.5 4.3 31 128-158 49-80 (236)
213 4hv4_A UDP-N-acetylmuramate--L 34.3 2.2E+02 0.0076 24.4 9.2 87 53-158 24-111 (494)
214 2ph5_A Homospermidine synthase 34.3 1.5E+02 0.0051 25.8 7.9 37 124-160 78-115 (480)
215 3ip3_A Oxidoreductase, putativ 34.2 80 0.0027 25.4 6.0 73 80-158 22-97 (337)
216 3cg4_A Response regulator rece 33.4 1E+02 0.0035 20.3 5.8 74 81-159 6-88 (142)
217 3qy9_A DHPR, dihydrodipicolina 33.3 13 0.00045 29.3 1.0 29 129-158 54-82 (243)
218 1vl6_A Malate oxidoreductase; 33.0 75 0.0026 26.9 5.7 74 79-157 189-291 (388)
219 3u7q_B Nitrogenase molybdenum- 32.8 73 0.0025 28.0 5.8 113 41-158 167-316 (523)
220 3kux_A Putative oxidoreductase 32.5 1.8E+02 0.0063 23.3 8.0 72 75-158 25-97 (352)
221 1f06_A MESO-diaminopimelate D- 32.4 47 0.0016 26.9 4.3 34 125-158 54-88 (320)
222 1l7b_A DNA ligase; BRCT, autos 32.3 1.1E+02 0.0036 20.1 5.6 62 81-157 9-70 (92)
223 3ilh_A Two component response 32.0 1.1E+02 0.0038 20.2 9.2 111 82-197 9-138 (146)
224 3gt7_A Sensor protein; structu 31.7 1.2E+02 0.0042 20.6 9.6 108 82-196 7-125 (154)
225 3tnl_A Shikimate dehydrogenase 31.7 1E+02 0.0035 25.1 6.2 16 124-139 221-236 (315)
226 3nv9_A Malic enzyme; rossmann 31.1 76 0.0026 27.7 5.4 87 69-157 206-324 (487)
227 2xdq_A Light-independent proto 31.1 2.4E+02 0.0082 23.8 9.2 71 84-159 198-271 (460)
228 1cf2_P Protein (glyceraldehyde 30.9 56 0.0019 26.9 4.5 35 127-161 76-111 (337)
229 3hdv_A Response regulator; PSI 30.9 1.1E+02 0.0039 20.0 10.6 109 82-197 7-126 (136)
230 2gkg_A Response regulator homo 30.9 1.1E+02 0.0036 19.6 8.4 110 83-200 6-127 (127)
231 3jte_A Response regulator rece 30.9 1.2E+02 0.004 20.1 9.6 106 83-195 4-120 (143)
232 1boo_A Protein (N-4 cytosine-s 30.8 39 0.0013 27.4 3.5 30 129-159 252-281 (323)
233 4e4r_A Phosphate acetyltransfe 30.8 89 0.0031 25.7 5.7 47 66-117 29-75 (331)
234 1g5t_A COB(I)alamin adenosyltr 30.4 1.8E+02 0.006 22.0 7.2 64 68-135 104-176 (196)
235 3u7q_A Nitrogenase molybdenum- 30.1 2.4E+02 0.0083 24.3 8.7 74 83-159 221-298 (492)
236 3eul_A Possible nitrate/nitrit 30.0 1.3E+02 0.0044 20.3 9.4 113 80-197 13-134 (152)
237 2qgq_A Protein TM_1862; alpha- 29.5 1.9E+02 0.0065 22.9 7.5 53 67-121 139-197 (304)
238 1gtz_A 3-dehydroquinate dehydr 29.3 87 0.003 23.0 4.8 59 96-157 38-104 (156)
239 1dih_A Dihydrodipicolinate red 29.1 11 0.00037 30.2 -0.2 37 124-160 67-105 (273)
240 3aek_B Light-independent proto 29.1 79 0.0027 27.7 5.4 87 69-158 133-234 (525)
241 2xdq_B Light-independent proto 29.0 2.6E+02 0.009 24.1 8.8 74 82-158 166-247 (511)
242 3gl9_A Response regulator; bet 28.9 1.2E+02 0.0041 19.6 10.5 108 83-197 3-121 (122)
243 3zy2_A Putative GDP-fucose pro 28.9 1.4E+02 0.0048 25.0 6.5 83 69-155 267-354 (362)
244 3geb_A EYES absent homolog 2; 28.8 83 0.0029 25.2 4.9 52 71-131 218-270 (274)
245 3s06_A Motility protein B; pep 28.8 1.4E+02 0.005 21.4 6.1 71 67-137 48-144 (166)
246 3gdo_A Uncharacterized oxidore 28.6 1.8E+02 0.0062 23.5 7.4 72 75-158 23-95 (358)
247 1ou0_A Precorrin-8X methylmuta 27.7 2.1E+02 0.0071 22.0 8.3 84 68-173 115-200 (207)
248 1tvc_A Methane monooxygenase c 27.6 1.1E+02 0.0038 23.2 5.6 12 76-87 169-180 (250)
249 2khz_A C-MYC-responsive protei 27.5 44 0.0015 24.4 3.0 35 125-159 73-110 (165)
250 1dxh_A Ornithine carbamoyltran 27.1 2.5E+02 0.0085 23.1 7.8 104 11-136 120-231 (335)
251 3u3z_A Microcephalin; DNA repa 27.1 1.9E+02 0.0066 21.4 7.4 66 80-158 9-74 (199)
252 3t4e_A Quinate/shikimate dehyd 27.0 64 0.0022 26.3 4.2 34 82-118 148-181 (312)
253 3m6m_D Sensory/regulatory prot 26.9 1.4E+02 0.0049 19.9 9.1 110 81-197 13-135 (143)
254 1eg2_A Modification methylase 26.1 50 0.0017 26.9 3.4 30 129-159 242-271 (319)
255 2nte_A BARD-1, BRCA1-associate 26.1 2E+02 0.0068 21.2 6.7 62 84-158 4-66 (210)
256 1td9_A Phosphate acetyltransfe 26.1 1.2E+02 0.0043 24.6 5.8 45 67-116 33-77 (329)
257 3e82_A Putative oxidoreductase 26.0 2.6E+02 0.009 22.6 8.1 73 74-158 24-97 (364)
258 3aja_A Putative uncharacterize 25.8 90 0.0031 25.3 4.8 26 66-91 116-141 (302)
259 3fhl_A Putative oxidoreductase 25.6 1.2E+02 0.0043 24.5 5.8 71 76-158 24-95 (362)
260 4e38_A Keto-hydroxyglutarate-a 25.5 1.9E+02 0.0065 22.4 6.5 74 82-162 106-184 (232)
261 2zf8_A MOTY, component of sodi 25.0 1E+02 0.0035 24.6 5.0 51 68-118 179-243 (278)
262 3lyh_A Cobalamin (vitamin B12) 24.8 1.6E+02 0.0056 19.8 6.6 64 52-118 6-71 (126)
263 3abi_A Putative uncharacterize 24.8 1.2E+02 0.0041 24.7 5.6 44 117-160 65-109 (365)
264 2q5c_A NTRC family transcripti 24.6 2.2E+02 0.0074 21.1 7.0 15 143-157 133-147 (196)
265 3al2_A DNA topoisomerase 2-bin 24.5 1.8E+02 0.0063 22.3 6.3 65 82-158 9-73 (235)
266 3l07_A Bifunctional protein fo 24.5 1.6E+02 0.0055 23.7 6.0 68 67-138 142-213 (285)
267 3ing_A Homoserine dehydrogenas 24.3 80 0.0027 25.8 4.3 73 80-159 32-117 (325)
268 4e4t_A Phosphoribosylaminoimid 24.2 3.1E+02 0.011 22.8 8.4 78 110-190 77-162 (419)
269 3hhp_A Malate dehydrogenase; M 24.2 1.5E+02 0.0052 23.9 6.0 64 53-119 71-150 (312)
270 3p2o_A Bifunctional protein fo 23.8 1.6E+02 0.0053 23.8 5.8 69 66-138 140-212 (285)
271 2dvm_A Malic enzyme, 439AA lon 23.8 1.1E+02 0.0036 26.3 5.1 36 80-116 184-219 (439)
272 1mld_A Malate dehydrogenase; o 23.8 2.8E+02 0.0095 22.2 7.5 65 51-118 68-148 (314)
273 3bio_A Oxidoreductase, GFO/IDH 23.7 61 0.0021 26.0 3.4 68 76-158 27-95 (304)
274 3u62_A Shikimate dehydrogenase 23.5 1.1E+02 0.0037 23.9 4.8 55 81-139 108-176 (253)
275 1vmi_A Putative phosphate acet 23.4 1.7E+02 0.0057 24.2 6.1 46 67-117 37-82 (355)
276 4a26_A Putative C-1-tetrahydro 23.3 2.3E+02 0.008 22.9 6.8 68 67-138 146-219 (300)
277 2czq_A Cutinase-like protein; 23.2 1.2E+02 0.0041 23.0 4.9 41 64-105 58-98 (205)
278 4eh1_A Flavohemoprotein; struc 23.2 82 0.0028 23.7 4.0 39 82-121 201-239 (243)
279 3nep_X Malate dehydrogenase; h 22.9 1E+02 0.0035 25.0 4.7 64 53-118 71-146 (314)
280 3c1a_A Putative oxidoreductase 22.8 64 0.0022 25.7 3.4 69 78-158 30-99 (315)
281 1fjm_A Protein serine/threonin 22.7 2.4E+02 0.0084 23.0 7.0 6 151-156 157-162 (330)
282 2vqe_B 30S ribosomal protein S 22.5 86 0.0029 24.9 4.0 32 128-159 157-188 (256)
283 3umc_A Haloacid dehalogenase; 22.3 2.1E+02 0.0071 20.9 6.1 49 144-192 202-250 (254)
284 1oju_A MDH, malate dehydrogena 22.3 2.1E+02 0.0071 22.8 6.4 66 51-119 69-147 (294)
285 3lab_A Putative KDPG (2-keto-3 22.2 1.6E+02 0.0054 22.7 5.4 66 96-161 96-168 (217)
286 3ehd_A Uncharacterized conserv 22.2 57 0.002 24.0 2.7 36 126-161 66-106 (162)
287 3gvi_A Malate dehydrogenase; N 22.2 1.8E+02 0.0063 23.6 6.1 63 51-116 75-149 (324)
288 3umg_A Haloacid dehalogenase; 22.1 1.9E+02 0.0066 20.9 5.9 53 143-195 197-249 (254)
289 4e38_A Keto-hydroxyglutarate-a 22.0 2.2E+02 0.0077 22.0 6.3 84 68-160 71-156 (232)
290 1e5d_A Rubredoxin\:oxygen oxid 22.0 3.1E+02 0.011 22.1 7.9 107 49-157 217-341 (402)
291 2ie4_C PP2A-alpha;, serine/thr 22.0 2.8E+02 0.0095 22.3 7.1 7 110-116 78-84 (309)
292 4a5o_A Bifunctional protein fo 21.9 3.1E+02 0.011 22.0 7.3 68 67-138 142-213 (286)
293 1a4i_A Methylenetetrahydrofola 21.8 1.6E+02 0.0054 24.0 5.5 68 67-138 146-217 (301)
294 3r0j_A Possible two component 21.8 2.5E+02 0.0086 20.9 9.8 109 81-196 22-139 (250)
295 2yv1_A Succinyl-COA ligase [AD 21.7 83 0.0028 25.2 3.8 26 129-154 70-96 (294)
296 2ayx_A Sensor kinase protein R 21.6 2.6E+02 0.009 21.0 9.4 108 82-196 129-245 (254)
297 1qkk_A DCTD, C4-dicarboxylate 21.5 1.9E+02 0.0065 19.4 9.9 106 82-194 3-117 (155)
298 2csu_A 457AA long hypothetical 21.5 3.2E+02 0.011 23.2 7.8 98 97-196 164-287 (457)
299 3tl2_A Malate dehydrogenase; c 21.5 2.2E+02 0.0074 23.0 6.4 63 51-116 78-152 (315)
300 3e7a_A PP-1A, serine/threonine 21.4 2.3E+02 0.0079 22.8 6.5 10 81-90 82-91 (299)
301 1f2v_A COBH, precorrin-8X meth 21.2 2.7E+02 0.0094 21.5 6.5 81 71-173 128-212 (219)
302 1f8y_A Nucleoside 2-deoxyribos 21.2 39 0.0013 24.6 1.6 34 126-159 75-113 (157)
303 3re1_A Uroporphyrinogen-III sy 21.2 75 0.0026 24.8 3.4 112 79-197 138-263 (269)
304 2fvt_A Conserved hypothetical 21.1 79 0.0027 22.4 3.2 44 71-117 56-102 (135)
305 3ll8_A Serine/threonine-protei 21.1 2.1E+02 0.0072 23.8 6.3 50 68-117 50-105 (357)
306 3l4e_A Uncharacterized peptida 21.0 2.1E+02 0.0072 21.5 5.9 79 80-161 25-123 (206)
307 2egg_A AROE, shikimate 5-dehyd 20.8 2.1E+02 0.007 22.7 6.1 56 81-139 140-214 (297)
308 3i42_A Response regulator rece 20.8 1.8E+02 0.006 18.7 5.8 106 82-195 3-119 (127)
309 3h63_A Serine/threonine-protei 20.7 2.8E+02 0.0094 22.5 6.8 8 150-157 160-167 (315)
310 3l3e_A DNA topoisomerase 2-bin 20.7 1.9E+02 0.0064 18.9 7.8 64 81-157 17-81 (107)
311 1dbw_A Transcriptional regulat 20.6 1.8E+02 0.0061 18.7 11.2 109 82-197 3-120 (126)
312 1qoz_A AXE, acetyl xylan ester 20.4 95 0.0033 23.5 3.8 27 65-91 64-90 (207)
313 2c4w_A 3-dehydroquinate dehydr 20.3 1.4E+02 0.0048 22.3 4.5 26 132-157 82-109 (176)
314 4e7p_A Response regulator; DNA 20.3 2E+02 0.0069 19.2 10.1 110 83-197 21-139 (150)
315 2yv2_A Succinyl-COA synthetase 20.3 1.3E+02 0.0044 24.1 4.7 28 130-157 72-101 (297)
316 3o8q_A Shikimate 5-dehydrogena 20.2 1.6E+02 0.0056 23.3 5.3 56 81-139 125-197 (281)
317 3oj0_A Glutr, glutamyl-tRNA re 20.2 25 0.00085 24.5 0.3 64 82-156 44-107 (144)
318 3sho_A Transcriptional regulat 20.2 2.4E+02 0.0082 20.0 8.0 85 69-158 28-120 (187)
319 2qxy_A Response regulator; reg 20.2 1.9E+02 0.0066 18.9 9.4 107 82-196 4-119 (142)
320 1g66_A Acetyl xylan esterase I 20.1 96 0.0033 23.5 3.7 26 66-91 65-90 (207)
No 1
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=100.00 E-value=1.2e-36 Score=282.12 Aligned_cols=199 Identities=74% Similarity=1.219 Sum_probs=184.4
Q ss_pred cccceeeEeeeCeeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHCC
Q psy15362 2 IASGQVQTSVNGIVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVP 81 (200)
Q Consensus 2 ~~~~~~~~~~~gi~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p 81 (200)
+..|+++..++|..+.||..+......+...++.|.......|+.+|||++.++|+|+++..|..+.++++|.+|+++.|
T Consensus 472 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~R~~~gLp~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP 551 (723)
T 4gyw_A 472 INRGQIQITINGFSISNGLATTQINNKAATGEEVPRTIIVTTRSQYGLPEDAIVYCNFNQLYKIDPSTLQMWANILKRVP 551 (723)
T ss_dssp HHHTCCEEEETTEEEEETTCHHHHCHHHHHTSSCCCSEEEEEGGGGTCCTTSEEEECCSCGGGCCHHHHHHHHHHHHHCS
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhcCCCCCCEEEEeCCccccCCHHHHHHHHHHHHhCC
Confidence 34578899999999999999877666666666677777788999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCC
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGE 161 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~ 161 (200)
|++|++.......+..+++.+++.|++++||+|++..+.++++..|+.+||+|||+||+||+|.+|||+||+||||..|.
T Consensus 552 ~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~ 631 (723)
T 4gyw_A 552 NSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGE 631 (723)
T ss_dssp SEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCS
T ss_pred CCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCC
Confidence 99999998655567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHHHHHhhcCCCcceecCHHHHHHHHHHhhcCCC
Q psy15362 162 TLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDRD 200 (200)
Q Consensus 162 ~~~~r~~~~~~~~~g~~~~ia~~~~~yv~~a~~l~~d~e 200 (200)
.+++|+++++++++|++|+|+.|.++|+++|++|++|++
T Consensus 632 ~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la~d~~ 670 (723)
T 4gyw_A 632 TLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLGTDLE 670 (723)
T ss_dssp SGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHHCHH
T ss_pred CccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHhcCHH
Confidence 999999999999999999999999999999999999864
No 2
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.97 E-value=2.5e-31 Score=240.24 Aligned_cols=158 Identities=16% Similarity=0.148 Sum_probs=141.1
Q ss_pred hhhhhcCCCCC--CEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEE--EcCCcccHHHHHHHHHHcCCCCCcEEEecc
Q psy15362 42 TSRQQYGLPED--AIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWL--LKFPAVGEANIQATAQALGLDQHRILFSNV 117 (200)
Q Consensus 42 ~~R~~l~l~~~--~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~i--vG~~~~~~~~l~~~~~~~gl~~~rv~f~g~ 117 (200)
..|..++++++ .++|||+++..|..+.++++|++|+++.|++++++ +|........+.+.+.++|++ +||+|+|+
T Consensus 428 p~r~~~~lp~~~G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~-~Rv~F~g~ 506 (631)
T 3q3e_A 428 PEKVDYLLRENPEVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLG-DSATAHPH 506 (631)
T ss_dssp CSSCCCCCCSCCSEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHG-GGEEEECC
T ss_pred CccccccCCcCCCeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCC-ccEEEcCC
Confidence 45778899986 89999999999999999999999999999998853 563212233444456678998 99999999
Q ss_pred CCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcc-eecCHHHHHHHHHHhh
Q psy15362 118 AAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPEL-IARTHKEYQDIAIRLG 196 (200)
Q Consensus 118 ~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~-ia~~~~~yv~~a~~l~ 196 (200)
+|.+++...|+.+||||+|||++||++++||||||+||||..|+.+++|+++++++..|++|| |++++++|++.|++|+
T Consensus 507 ~p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La 586 (631)
T 3q3e_A 507 SPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIANTVDEYVERAVRLA 586 (631)
T ss_dssp CCHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999995 9999999999999999
Q ss_pred cCCC
Q psy15362 197 TDRD 200 (200)
Q Consensus 197 ~d~e 200 (200)
+|++
T Consensus 587 ~D~~ 590 (631)
T 3q3e_A 587 ENHQ 590 (631)
T ss_dssp HCHH
T ss_pred CCHH
Confidence 9974
No 3
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.95 E-value=3.1e-27 Score=211.48 Aligned_cols=158 Identities=39% Similarity=0.610 Sum_probs=142.9
Q ss_pred hhhhhhcCCCCCCEEEEEeCCC-CCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCC
Q psy15362 41 ITSRQQYGLPEDAIVYCNFNQL-YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA 119 (200)
Q Consensus 41 ~~~R~~l~l~~~~~v~~~~~r~-~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~ 119 (200)
...|+++|++++.+++ +++|. .|+++.++++|.+++++.|+++|+|+|..++..+.++++++++|+.+++|+|+|+++
T Consensus 365 ~~~r~~~~~~~~~~v~-~~g~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~ 443 (568)
T 2vsy_A 365 PPSRTQCGLPEQGVVL-CCFNNSYKLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLP 443 (568)
T ss_dssp CCCTGGGTCCTTSCEE-EECCCGGGCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCC
T ss_pred CCCccccCCCCCCEEE-EeCCccccCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCC
Confidence 4578899999887776 44553 499999999999999999999999999334677899999999999558999999999
Q ss_pred HHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceecCHHHHHHHHHHhhcCC
Q psy15362 120 KEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 120 ~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~~~~~yv~~a~~l~~d~ 199 (200)
.+++..+|+.||+||.||++++|++++|||+||+|||+.+|..+.++.+++++...|++++|.+|.++|++.+.++++|+
T Consensus 444 ~~~~~~~~~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~~~~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 444 HPQYLARYRHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVADDAAFVAKAVALASDP 523 (568)
T ss_dssp HHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHhcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcCCHHHHHHHHHHHhcCH
Confidence 99999999999999999988669999999999999999999999999999999999999999999999999999999886
No 4
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.91 E-value=2.2e-23 Score=179.50 Aligned_cols=174 Identities=15% Similarity=0.241 Sum_probs=138.1
Q ss_pred eeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCC--CCCCHHHHHHHHHHHHHCCCcEEEEEcCC
Q psy15362 14 IVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFP 91 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p~~~l~ivG~~ 91 (200)
.+|+||+|+..|.+.+ .+...+...|++++++++.++++++||. .|+++.+++++.++.++.|+.+|+++|++
T Consensus 197 ~vi~ngvd~~~~~~~~-----~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g 271 (416)
T 2x6q_A 197 VIMPPSIDPLSEKNVE-----LKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVM 271 (416)
T ss_dssp EECCCCBCTTSTTTSC-----CCHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred EEeCCCCChhhhcccc-----cChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecC
Confidence 4689999987654221 1233456789999999988889999985 69999999999999999999999999975
Q ss_pred cc----cHHHHHHHHHHcCCCCCcEEEeccCC---HHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeecCCCcc
Q psy15362 92 AV----GEANIQATAQALGLDQHRILFSNVAA---KEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTLPGETL 163 (200)
Q Consensus 92 ~~----~~~~l~~~~~~~gl~~~rv~f~g~~~---~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~~g~~~ 163 (200)
.. ..+.++++++++++. ++|+|+|+++ .+++..+|+.||+++.||.+++ |++++||||||+|||+++....
T Consensus 272 ~~~~~~~~~~l~~~~~~~~~~-~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~ 350 (416)
T 2x6q_A 272 AHDDPEGWIYFEKTLRKIGED-YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGI 350 (416)
T ss_dssp CTTCHHHHHHHHHHHHHHTTC-TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHH
T ss_pred cccchhHHHHHHHHHHHhCCC-CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCC
Confidence 22 146788999999997 9999999664 6789999999999999997765 9999999999999999764221
Q ss_pred hhhhHHHHHhhcCCCcceecCHHHHHHHHHHhhcCC
Q psy15362 164 ASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 164 ~~r~~~~~~~~~g~~~~ia~~~~~yv~~a~~l~~d~ 199 (200)
.+ ++ ..|..+++.+|.+++.+...++++|+
T Consensus 351 ~e-----~i-~~~~~g~l~~d~~~la~~i~~ll~~~ 380 (416)
T 2x6q_A 351 KF-----QI-VDGETGFLVRDANEAVEVVLYLLKHP 380 (416)
T ss_dssp HH-----HC-CBTTTEEEESSHHHHHHHHHHHHHCH
T ss_pred hh-----he-ecCCCeEEECCHHHHHHHHHHHHhCH
Confidence 11 11 12445666679999999998888775
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.90 E-value=2.5e-23 Score=179.83 Aligned_cols=172 Identities=20% Similarity=0.238 Sum_probs=135.6
Q ss_pred eeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCC--CCCCHHHHHHHHHHHHHCC--CcEEEEEc
Q psy15362 14 IVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVP--NSILWLLK 89 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p--~~~l~ivG 89 (200)
.+|+||+|.+.|.+.. ...+...|++++++++.++++++||. .|+++.+++++.++.++.| +.+|+++|
T Consensus 211 ~vi~ngvd~~~~~~~~-------~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G 283 (438)
T 3c48_A 211 SVVSPGADVELYSPGN-------DRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICG 283 (438)
T ss_dssp EECCCCCCTTTSCCC-----------CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEEC
T ss_pred EEecCCccccccCCcc-------cchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEe
Confidence 3689999988764321 11224588999999999999999986 5999999999999999988 89999999
Q ss_pred CC---cccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeecCCCcchh
Q psy15362 90 FP---AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTLPGETLAS 165 (200)
Q Consensus 90 ~~---~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~~g~~~~~ 165 (200)
.. ++..+.++++++++|+. ++|+|+|+++.+++..+|+.||++|.|+.+++ |++++|||+||+|||+++.....+
T Consensus 284 ~~~~~g~~~~~l~~~~~~~~l~-~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e 362 (438)
T 3c48_A 284 GPSGPNATPDTYRHMAEELGVE-KRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPI 362 (438)
T ss_dssp CBC------CHHHHHHHHTTCT-TTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHH
T ss_pred CCCCCCcHHHHHHHHHHHcCCC-CcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhH
Confidence 61 24567899999999997 99999999999999999999999999997765 999999999999999986543322
Q ss_pred hhHHHHHhhcCCCccee--cCHHHHHHHHHHhhcCC
Q psy15362 166 RVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 166 r~~~~~~~~~g~~~~ia--~~~~~yv~~a~~l~~d~ 199 (200)
++. .|...++. .|.+++++...++++|+
T Consensus 363 -----~i~-~~~~g~~~~~~d~~~la~~i~~l~~~~ 392 (438)
T 3c48_A 363 -----AVA-EGETGLLVDGHSPHAWADALATLLDDD 392 (438)
T ss_dssp -----HSC-BTTTEEEESSCCHHHHHHHHHHHHHCH
T ss_pred -----Hhh-CCCcEEECCCCCHHHHHHHHHHHHcCH
Confidence 111 23344554 48899999998888775
No 6
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.90 E-value=2.9e-23 Score=176.27 Aligned_cols=168 Identities=15% Similarity=0.189 Sum_probs=138.5
Q ss_pred eeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCC--CCCCHHHHHHHHHHHHHCCCcEEEEEcCC
Q psy15362 14 IVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFP 91 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p~~~l~ivG~~ 91 (200)
.+|+||+|.+.|.+. +...+...|++++++++.++++++||. .|+.+.+++++.++.++.|+.+|+++|+
T Consensus 166 ~vi~ngv~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~- 237 (394)
T 3okp_A 166 EHLPSGVDVKRFTPA-------TPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGS- 237 (394)
T ss_dssp EECCCCBCTTTSCCC-------CHHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECC-
T ss_pred EEecCCcCHHHcCCC-------CchhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcC-
Confidence 568999998877532 122346789999999998889999986 6999999999999999999999999997
Q ss_pred cccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCC-------CC-chHHHHHHHcCCCeeecCCCcc
Q psy15362 92 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC-------NG-HTTSMDVLWTGTPVVTLPGETL 163 (200)
Q Consensus 92 ~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~-------~~-g~~~lEAma~G~PVV~~~g~~~ 163 (200)
++..+.+++++ .++. ++|+|+|+++.+++..+|+.||+++.||.+ ++ |++++|||+||+|||+++....
T Consensus 238 g~~~~~l~~~~--~~~~-~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~ 314 (394)
T 3okp_A 238 GRYESTLRRLA--TDVS-QNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGA 314 (394)
T ss_dssp CTTHHHHHHHT--GGGG-GGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTG
T ss_pred chHHHHHHHHH--hccc-CeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCCh
Confidence 46778888888 6786 999999999999999999999999999976 65 9999999999999999865443
Q ss_pred hhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhhcCC
Q psy15362 164 ASRVAASQLATLGCPELIAR--THKEYQDIAIRLGTDR 199 (200)
Q Consensus 164 ~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~~d~ 199 (200)
.+-+. .| ..++.+ |.+++++...++++|+
T Consensus 315 ~e~i~------~~-~g~~~~~~d~~~l~~~i~~l~~~~ 345 (394)
T 3okp_A 315 PETVT------PA-TGLVVEGSDVDKLSELLIELLDDP 345 (394)
T ss_dssp GGGCC------TT-TEEECCTTCHHHHHHHHHHHHTCH
T ss_pred HHHHh------cC-CceEeCCCCHHHHHHHHHHHHhCH
Confidence 33221 24 455554 8999999999988875
No 7
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.90 E-value=3.3e-23 Score=161.58 Aligned_cols=167 Identities=10% Similarity=0.067 Sum_probs=128.7
Q ss_pred ecccccccccC--CCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCC---CCCCHHHHHHHHHHH--HHCCCcEEEEE
Q psy15362 16 LQNGLATNQTN--TKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQL---YKIDPSTLQMWVNVL--KAVPNSILWLL 88 (200)
Q Consensus 16 i~ng~~~~~~~--~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~---~K~~~~~l~a~~~i~--~~~p~~~l~iv 88 (200)
||||+|++.|. +... ...+.+...|++++++++. +++++|+. .|+++.+++++.++. ++.|+.+|+++
T Consensus 2 ipngvd~~~f~~~~~~~----~~~~~~~~~r~~~~~~~~~-~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~ 76 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTG----SRDERKKSLLSKFGMDEGV-TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII 76 (200)
T ss_dssp ---CCCTTTSSGGGSCS----CHHHHHHHHHHHTTCCSCE-EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEE
T ss_pred CCCccChhhcccccccc----chhhHHHHHHHHcCCCCCC-EEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEE
Confidence 68999999885 3310 0011246789999998765 66777774 589999999999998 78899999999
Q ss_pred cCCcc--cHHHHHHHHHHcCCCCCcEEE-eccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeecCCCcch
Q psy15362 89 KFPAV--GEANIQATAQALGLDQHRILF-SNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTLPGETLA 164 (200)
Q Consensus 89 G~~~~--~~~~l~~~~~~~gl~~~rv~f-~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~~g~~~~ 164 (200)
|. ++ ..+.+++++++++ +|+| +|+++++++..+|+.||+++.|+.+++ |++++|||+||+|||+++...+.
T Consensus 77 G~-~~~~~~~~l~~~~~~~~----~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~ 151 (200)
T 2bfw_A 77 GK-GDPELEGWARSLEEKHG----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLR 151 (200)
T ss_dssp CC-BCHHHHHHHHHHHHHCT----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHH
T ss_pred CC-CChHHHHHHHHHHHhcC----CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCChH
Confidence 96 45 5678899998876 7999 999999999999999999999997765 99999999999999997643211
Q ss_pred hhhHHHHHhhcCCCcceec--CHHHHHHHHHHhhc-CC
Q psy15362 165 SRVAASQLATLGCPELIAR--THKEYQDIAIRLGT-DR 199 (200)
Q Consensus 165 ~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~~-d~ 199 (200)
.++ .+-..++.+ |.+++++...++++ |+
T Consensus 152 -----e~~--~~~~g~~~~~~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 152 -----DII--TNETGILVKAGDPGELANAILKALELSR 182 (200)
T ss_dssp -----HHC--CTTTCEEECTTCHHHHHHHHHHHHHCCH
T ss_pred -----HHc--CCCceEEecCCCHHHHHHHHHHHHhcCH
Confidence 122 244555554 89999999999887 75
No 8
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.90 E-value=2.5e-23 Score=178.79 Aligned_cols=170 Identities=14% Similarity=0.100 Sum_probs=133.9
Q ss_pred CeeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCC--CCEEEEEeCCC--CCCCHHHHHHHHHHHHHCCCcEEEEE
Q psy15362 13 GIVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPE--DAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLL 88 (200)
Q Consensus 13 gi~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~--~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p~~~l~iv 88 (200)
-.+|+||+|.+.| ...|+++++++ +.++++++||. .|+++.+++++.++.++.|+.+|+++
T Consensus 157 ~~vi~ngvd~~~~---------------~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~iv 221 (413)
T 3oy2_A 157 INIVSHFVDTKTI---------------YDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFL 221 (413)
T ss_dssp EEECCCCCCCCCC---------------TTHHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred eEEeCCCCCHHHH---------------HHHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEE
Confidence 3468899988765 35677889988 88999999996 69999999999999999999999999
Q ss_pred cCCccc-----HHHHHHHHHHcCCCCCc-------EEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCe
Q psy15362 89 KFPAVG-----EANIQATAQALGLDQHR-------ILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPV 155 (200)
Q Consensus 89 G~~~~~-----~~~l~~~~~~~gl~~~r-------v~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PV 155 (200)
|++... .+.++++++++|++ ++ |+|.|+++.+++..+|+.||+++.||.+++ |++++|||+||+||
T Consensus 222 G~g~~~~~~~l~~~~~~~~~~~~l~-~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~Pv 300 (413)
T 3oy2_A 222 CNSHHESKFDLHSIALRELVASGVD-NVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPL 300 (413)
T ss_dssp EECCTTCSCCHHHHHHHHHHHHTCS-CHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCE
T ss_pred eCCcccchhhHHHHHHHHHHHcCcc-cccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCE
Confidence 975321 28899999999997 87 888999999999999999999999998765 99999999999999
Q ss_pred eecCCCcchhhhHHHHH------------hhcCCCccee-cCHHHHHHHHHHhhcCC
Q psy15362 156 VTLPGETLASRVAASQL------------ATLGCPELIA-RTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 156 V~~~g~~~~~r~~~~~~------------~~~g~~~~ia-~~~~~yv~~a~~l~~d~ 199 (200)
|+++...+.+-+..+.. ...|+..++. .|.+++++.. ++++|+
T Consensus 301 I~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 301 IISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDE 356 (413)
T ss_dssp EEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTSH
T ss_pred EEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcCH
Confidence 99764322211110000 0002222443 6899999999 998875
No 9
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.89 E-value=3.1e-22 Score=171.97 Aligned_cols=173 Identities=9% Similarity=0.046 Sum_probs=136.8
Q ss_pred eeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCC---CCCCHHHHHHHHHHHHHC--CCcEEEEE
Q psy15362 14 IVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQL---YKIDPSTLQMWVNVLKAV--PNSILWLL 88 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~---~K~~~~~l~a~~~i~~~~--p~~~l~iv 88 (200)
.+|+||+|++.|.+... +..+...+...|++++++++ ++++++||. .|+++.+++++.++.++. |+.+|+++
T Consensus 215 ~vi~ngvd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~ 291 (439)
T 3fro_A 215 TYVFNGIDCSFWNESYL--TGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII 291 (439)
T ss_dssp EECCCCCCTTTSCGGGS--CSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEE
T ss_pred eecCCCCCchhcCcccc--cchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEE
Confidence 46899999988764310 01122345778999999988 888999975 489999999999998877 89999999
Q ss_pred cCCcccH--HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeecCCCcchh
Q psy15362 89 KFPAVGE--ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTLPGETLAS 165 (200)
Q Consensus 89 G~~~~~~--~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~~g~~~~~ 165 (200)
|++ +.. +.+++++++++ ++++|.|+++.+++..+|+.||+++.||.+++ |++++||||||+|||+++.....+
T Consensus 292 G~g-~~~~~~~l~~~~~~~~---~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e 367 (439)
T 3fro_A 292 GKG-DPELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRD 367 (439)
T ss_dssp CCC-CHHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHH
T ss_pred cCC-ChhHHHHHHHHHhhcC---CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcce
Confidence 974 544 78899999877 67889999999999999999999999998765 999999999999999986543222
Q ss_pred hhHHHHHhhcCCCccee--cCHHHHHHHHHHhhc-CCC
Q psy15362 166 RVAASQLATLGCPELIA--RTHKEYQDIAIRLGT-DRD 200 (200)
Q Consensus 166 r~~~~~~~~~g~~~~ia--~~~~~yv~~a~~l~~-d~e 200 (200)
++. .| .+++. .|.+++++...++++ |++
T Consensus 368 -----~~~-~~-~g~~~~~~d~~~la~~i~~ll~~~~~ 398 (439)
T 3fro_A 368 -----IIT-NE-TGILVKAGDPGELANAILKALELSRS 398 (439)
T ss_dssp -----HCC-TT-TCEEECTTCHHHHHHHHHHHHHHTTT
T ss_pred -----eEE-cC-ceEEeCCCCHHHHHHHHHHHHhcCHH
Confidence 221 24 45554 489999999999988 764
No 10
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.89 E-value=5.4e-23 Score=181.47 Aligned_cols=173 Identities=10% Similarity=0.028 Sum_probs=136.2
Q ss_pred eeecccccccccCCCCCCCCCCCchhhhhhhhhcC-----CCCCCEEEEEeCCC--CCCCHHHHHHHHHHHHHCCCc-EE
Q psy15362 14 IVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYG-----LPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNS-IL 85 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~-----l~~~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p~~-~l 85 (200)
.+|+||+|++.|.+.. +...+...|+++| ++++.++++++||. .|+++.+++++.++.++.|+. ++
T Consensus 224 ~vi~ngvd~~~~~~~~------~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l 297 (499)
T 2r60_A 224 SVIPPGVNTRVFDGEY------GDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLV 297 (499)
T ss_dssp EECCCCBCTTTSSSCC------CHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEE
T ss_pred EEECCCcChhhcCccc------hhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEE
Confidence 4689999988775331 1223467888898 88888889999986 699999999999988776764 78
Q ss_pred EEEcCC-cc----------c---HHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccc----cEEEeCCCCCC-chHHH
Q psy15362 86 WLLKFP-AV----------G---EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLA----DVCLDTPLCNG-HTTSM 146 (200)
Q Consensus 86 ~ivG~~-~~----------~---~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~a----Dv~l~~~~~~~-g~~~l 146 (200)
+++|+. ++ . .+.++++++++|+. ++|+|+|+++.+++..+|+.| |++|.||.+++ |++++
T Consensus 298 ~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~-~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~l 376 (499)
T 2r60_A 298 LTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCR-GKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPV 376 (499)
T ss_dssp EEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCB-TTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHH
T ss_pred EEECCCCCcccccccccccchHHHHHHHHHHHhcCCC-ceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHH
Confidence 888862 12 1 67899999999997 999999999999999999999 99999998765 99999
Q ss_pred HHHHcCCCeeecCCCcchhhhHHHHHhhcCCCccee--cCHHHHHHHHHHhhcCC
Q psy15362 147 DVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 147 EAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia--~~~~~yv~~a~~l~~d~ 199 (200)
|||+||+|||+++.....+ ++. .|..+++. .|.+++++...++++|+
T Consensus 377 EAma~G~PvI~s~~~g~~e-----~v~-~~~~g~l~~~~d~~~la~~i~~ll~~~ 425 (499)
T 2r60_A 377 EAMASGLPAVVTRNGGPAE-----ILD-GGKYGVLVDPEDPEDIARGLLKAFESE 425 (499)
T ss_dssp HHHHTTCCEEEESSBHHHH-----HTG-GGTSSEEECTTCHHHHHHHHHHHHSCH
T ss_pred HHHHcCCCEEEecCCCHHH-----Hhc-CCceEEEeCCCCHHHHHHHHHHHHhCH
Confidence 9999999999986433222 121 23334444 48899999998888875
No 11
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.88 E-value=1.2e-22 Score=171.62 Aligned_cols=169 Identities=14% Similarity=0.164 Sum_probs=134.2
Q ss_pred eeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCC--CCCCHHHHHHHHHHHHH-CCCcEEEEEcC
Q psy15362 14 IVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKA-VPNSILWLLKF 90 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~--~K~~~~~l~a~~~i~~~-~p~~~l~ivG~ 90 (200)
.+|+||+|++.|.+.. ..+.+...|++++++++.++++++||. .|+.+.+++++.++.++ .|+.+|+++|.
T Consensus 163 ~vi~ngv~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~ 236 (374)
T 2iw1_A 163 QILPPGIYPDRKYSEQ------IPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQ 236 (374)
T ss_dssp EECCCCCCGGGSGGGS------CTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESS
T ss_pred EEecCCcCHHhcCccc------chhHHHHHHHHhCCCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcC
Confidence 4689999998775432 222346789999999999999999985 58999999999988776 58999999997
Q ss_pred CcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeecCCCcchhhhHH
Q psy15362 91 PAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTLPGETLASRVAA 169 (200)
Q Consensus 91 ~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~~g~~~~~r~~~ 169 (200)
+ + .+.++++++++++. ++|+|+|+. +++..+|+.||+++.||.+++ |++++|||+||+|||+++.....+
T Consensus 237 g-~-~~~~~~~~~~~~~~-~~v~~~g~~--~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e---- 307 (374)
T 2iw1_A 237 D-K-PRKFEALAEKLGVR-SNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAH---- 307 (374)
T ss_dssp S-C-CHHHHHHHHHHTCG-GGEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTH----
T ss_pred C-C-HHHHHHHHHHcCCC-CcEEECCCc--ccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCCchh----
Confidence 4 4 47899999999997 999999985 678889999999999997665 999999999999999986543322
Q ss_pred HHHhhcCCCcceec---CHHHHHHHHHHhhcCC
Q psy15362 170 SQLATLGCPELIAR---THKEYQDIAIRLGTDR 199 (200)
Q Consensus 170 ~~~~~~g~~~~ia~---~~~~yv~~a~~l~~d~ 199 (200)
++.. +..+++.+ |.+++++...++++|+
T Consensus 308 -~i~~-~~~g~~~~~~~~~~~l~~~i~~l~~~~ 338 (374)
T 2iw1_A 308 -YIAD-ANCGTVIAEPFSQEQLNEVLRKALTQS 338 (374)
T ss_dssp -HHHH-HTCEEEECSSCCHHHHHHHHHHHHHCH
T ss_pred -hhcc-CCceEEeCCCCCHHHHHHHHHHHHcCh
Confidence 2222 22344443 8899999999988775
No 12
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.87 E-value=3.5e-22 Score=170.79 Aligned_cols=165 Identities=14% Similarity=0.180 Sum_probs=129.4
Q ss_pred eeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCC--CCCCHHHHHHHHHHHHHCCCcEEEEEcCC
Q psy15362 14 IVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFP 91 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p~~~l~ivG~~ 91 (200)
.+|+||+|++.|.+. .+...|++++++++.++++++||. .|+++.+++++.++.++ ++.+|+++|+
T Consensus 182 ~vi~ngv~~~~~~~~----------~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~- 249 (394)
T 2jjm_A 182 QTVYNFIDERVYFKR----------DMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGD- 249 (394)
T ss_dssp EECCCCCCTTTCCCC----------CCHHHHHHTTCC---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECC-
T ss_pred EEecCCccHHhcCCc----------chHHHHHHcCCCCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEEEECC-
Confidence 468999998876432 125678889998888888899986 59999999999998876 6799999996
Q ss_pred cccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeecCCCcchhhhHHH
Q psy15362 92 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTLPGETLASRVAAS 170 (200)
Q Consensus 92 ~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~~g~~~~~r~~~~ 170 (200)
++..+.++++++++|+. ++|+|+|+. +++..+|+.||+++.||.+++ |++++|||+||+|||+++.....+-+.
T Consensus 250 g~~~~~l~~~~~~~~l~-~~v~~~g~~--~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~-- 324 (394)
T 2jjm_A 250 GPEFCTILQLVKNLHIE-DRVLFLGKQ--DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQ-- 324 (394)
T ss_dssp CTTHHHHHHHHHTTTCG-GGBCCCBSC--SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCC--
T ss_pred chHHHHHHHHHHHcCCC-CeEEEeCch--hhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCChHHHhh--
Confidence 46778999999999997 999999975 678889999999999997765 999999999999999986543322111
Q ss_pred HHhhcCCCcceec--CHHHHHHHHHHhhcCC
Q psy15362 171 QLATLGCPELIAR--THKEYQDIAIRLGTDR 199 (200)
Q Consensus 171 ~~~~~g~~~~ia~--~~~~yv~~a~~l~~d~ 199 (200)
.|...++.+ |.+++++...++++|+
T Consensus 325 ----~~~~g~~~~~~d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 325 ----HGDTGYLCEVGDTTGVADQAIQLLKDE 351 (394)
T ss_dssp ----BTTTEEEECTTCHHHHHHHHHHHHHCH
T ss_pred ----cCCceEEeCCCCHHHHHHHHHHHHcCH
Confidence 133445554 8899999998888775
No 13
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.85 E-value=3e-21 Score=180.49 Aligned_cols=179 Identities=9% Similarity=0.032 Sum_probs=134.0
Q ss_pred eeecccccccccCCCCCCCCCCCc---h------hhhhhhhhcCC--CCCCEEEEEeCCC--CCCCHHHHHHHHHHHHHC
Q psy15362 14 IVLQNGLATNQTNTKTATGEEVPQ---S------IVITSRQQYGL--PEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAV 80 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~~~~~~---~------~~~~~R~~l~l--~~~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~ 80 (200)
.+||||+|++.|.+.......... . .....|+.+|+ +++.++++++||. .|+++.+++++.++.+..
T Consensus 522 ~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~ 601 (816)
T 3s28_A 522 NIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLR 601 (816)
T ss_dssp EECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHH
T ss_pred EEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhC
Confidence 579999999998765322211100 0 01245677888 7778899999986 699999999999998888
Q ss_pred CCcEEEEEcCCcc----------cHHHHHHHHHHcCCCCCcEEEeccCC----HHHHHhhcc-cccEEEeCCCCCC-chH
Q psy15362 81 PNSILWLLKFPAV----------GEANIQATAQALGLDQHRILFSNVAA----KEEHVRRGQ-LADVCLDTPLCNG-HTT 144 (200)
Q Consensus 81 p~~~l~ivG~~~~----------~~~~l~~~~~~~gl~~~rv~f~g~~~----~~~~~~~~~-~aDv~l~~~~~~~-g~~ 144 (200)
|+++|+|+|++.. ..+.++++++++++. ++|+|+|+++ .+++..+|+ ++|+|+.||.+++ |++
T Consensus 602 ~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~-~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~Egfglv 680 (816)
T 3s28_A 602 ELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLN-GQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLT 680 (816)
T ss_dssp HHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCB-BBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHH
T ss_pred CCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCC-CcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHH
Confidence 9999999997531 456789999999998 9999999654 478888887 7899999998765 999
Q ss_pred HHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhh----cCC
Q psy15362 145 SMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG----TDR 199 (200)
Q Consensus 145 ~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~----~d~ 199 (200)
++||||||+|||+++.....+ ++ ..|..+++.+ |.+++++...+++ .|+
T Consensus 681 llEAMA~G~PVIasd~GG~~E-----iV-~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~ 735 (816)
T 3s28_A 681 VVEAMTCGLPTFATCKGGPAE-----II-VHGKSGFHIDPYHGDQAADTLADFFTKCKEDP 735 (816)
T ss_dssp HHHHHHTTCCEEEESSBTHHH-----HC-CBTTTBEEECTTSHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHcCCCEEEeCCCChHH-----HH-ccCCcEEEeCCCCHHHHHHHHHHHHHHhccCH
Confidence 999999999999976433222 11 1244555553 7888888886655 665
No 14
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.84 E-value=1.7e-20 Score=164.56 Aligned_cols=174 Identities=14% Similarity=0.037 Sum_probs=128.0
Q ss_pred eeecccccccccCCCCCCC-------CCCC--chhhhhhhhhcCCCCC-CEEEEEeCCC--CCCCHHHHHHHHHHHHHCC
Q psy15362 14 IVLQNGLATNQTNTKTATG-------EEVP--QSIVITSRQQYGLPED-AIVYCNFNQL--YKIDPSTLQMWVNVLKAVP 81 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~-------~~~~--~~~~~~~R~~l~l~~~-~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p 81 (200)
.+|+||+|++.|.+..... ..++ ...+..+|+++|++++ ..+++++||. .|+++.+++++.++.+ +
T Consensus 242 ~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~ 319 (485)
T 1rzu_A 242 HGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--L 319 (485)
T ss_dssp EECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--T
T ss_pred eEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--c
Confidence 4689999998876432110 0000 0124578899999985 6788899985 6999999999999876 5
Q ss_pred CcEEEEEcCCcc-cHHHHHHHHHHcCCCCCcEE-EeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeec
Q psy15362 82 NSILWLLKFPAV-GEANIQATAQALGLDQHRIL-FSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 82 ~~~l~ivG~~~~-~~~~l~~~~~~~gl~~~rv~-f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~ 158 (200)
+.+|+++|++.. ..+.+++++++++ ++|+ |+|+ +.+++..+|+.||++|.||.+++ |++++|||+||+|||++
T Consensus 320 ~~~l~ivG~g~~~~~~~l~~~~~~~~---~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s 395 (485)
T 1rzu_A 320 GGRLVVLGAGDVALEGALLAAASRHH---GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVA 395 (485)
T ss_dssp TCEEEEEECBCHHHHHHHHHHHHHTT---TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEE
T ss_pred CceEEEEeCCchHHHHHHHHHHHhCC---CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEe
Confidence 899999997421 3678889998864 6787 7888 77777889999999999998765 99999999999999997
Q ss_pred CCCcchhhhHHHHHhhcC---------CCccee--cCHHHHHHHHHHhh---cCC
Q psy15362 159 PGETLASRVAASQLATLG---------CPELIA--RTHKEYQDIAIRLG---TDR 199 (200)
Q Consensus 159 ~g~~~~~r~~~~~~~~~g---------~~~~ia--~~~~~yv~~a~~l~---~d~ 199 (200)
+.....+ ++ ..| ..+++. .|.+++++...+++ +|+
T Consensus 396 ~~gg~~e-----~v-~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~ 444 (485)
T 1rzu_A 396 RTGGLAD-----TV-IDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDP 444 (485)
T ss_dssp SSHHHHH-----HC-CBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCH
T ss_pred CCCChhh-----ee-cccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCH
Confidence 6432211 11 123 445554 48899999888887 564
No 15
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.84 E-value=1.8e-20 Score=164.42 Aligned_cols=174 Identities=16% Similarity=0.001 Sum_probs=127.8
Q ss_pred eeecccccccccCCCCCCC-------CCC--CchhhhhhhhhcCCCC--CCEEEEEeCCC--CCCCHHHHHHHHHHHHHC
Q psy15362 14 IVLQNGLATNQTNTKTATG-------EEV--PQSIVITSRQQYGLPE--DAIVYCNFNQL--YKIDPSTLQMWVNVLKAV 80 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~-------~~~--~~~~~~~~R~~l~l~~--~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~ 80 (200)
.+|+||+|++.|.+..... ..+ ....+..+|+++++++ +.++++++||. .|+++.+++++.++.+
T Consensus 242 ~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~-- 319 (485)
T 2qzs_A 242 SGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE-- 319 (485)
T ss_dssp EECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--
T ss_pred EEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--
Confidence 4689999998875432100 000 0012457889999986 66788888874 6999999999999876
Q ss_pred CCcEEEEEcCCc-ccHHHHHHHHHHcCCCCCcEE-EeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeee
Q psy15362 81 PNSILWLLKFPA-VGEANIQATAQALGLDQHRIL-FSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVT 157 (200)
Q Consensus 81 p~~~l~ivG~~~-~~~~~l~~~~~~~gl~~~rv~-f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~ 157 (200)
++.+|+++|++. ...+.+++++++++ ++|+ |+|+ +.+++..+|+.||++|.||.+++ |++++||||||+|||+
T Consensus 320 ~~~~l~ivG~g~~~~~~~l~~~~~~~~---~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~ 395 (485)
T 2qzs_A 320 QGGQLALLGAGDPVLQEGFLAAAAEYP---GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLV 395 (485)
T ss_dssp TTCEEEEEEEECHHHHHHHHHHHHHST---TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEE
T ss_pred CCcEEEEEeCCchHHHHHHHHHHHhCC---CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEE
Confidence 589999999742 14678889998864 6786 8898 77777889999999999998765 9999999999999999
Q ss_pred cCCCcchhhhHHHHHhhcC---------CCccee--cCHHHHHHHHHHhh---cCC
Q psy15362 158 LPGETLASRVAASQLATLG---------CPELIA--RTHKEYQDIAIRLG---TDR 199 (200)
Q Consensus 158 ~~g~~~~~r~~~~~~~~~g---------~~~~ia--~~~~~yv~~a~~l~---~d~ 199 (200)
++.....+ ++. .| ..+++. .|.+++++...+++ +|+
T Consensus 396 s~~gg~~e-----~v~-~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~ 445 (485)
T 2qzs_A 396 RRTGGLAD-----TVS-DCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRP 445 (485)
T ss_dssp ESSHHHHH-----HCC-BCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSH
T ss_pred CCCCCccc-----eec-cCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCH
Confidence 76432211 121 23 455554 48899999888887 554
No 16
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.84 E-value=1.2e-20 Score=145.47 Aligned_cols=144 Identities=12% Similarity=0.129 Sum_probs=115.4
Q ss_pred hhcCCCCCCEEEEEeCCC--CCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHH--HcCCCCCcEEEeccCCH
Q psy15362 45 QQYGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQ--ALGLDQHRILFSNVAAK 120 (200)
Q Consensus 45 ~~l~l~~~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~--~~gl~~~rv~f~g~~~~ 120 (200)
..+.++++..+++++|+. .|+.+.+++++.++ |+.+|+++|.+ +..+.++++++ ++++. ++|+|+|+++.
T Consensus 15 ~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~-~~~~~l~~~~~~~~~~l~-~~v~~~g~~~~ 88 (177)
T 2f9f_A 15 SKFKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWF-SKGDHAERYARKIMKIAP-DNVKFLGSVSE 88 (177)
T ss_dssp TTCCCCCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCC-CTTSTHHHHHHHHHHHSC-TTEEEEESCCH
T ss_pred cccccCCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecC-ccHHHHHHHHHhhhcccC-CcEEEeCCCCH
Confidence 346677887788888885 58999999988765 88999999974 55578888998 88997 99999999999
Q ss_pred HHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcce-ecCHHHHHHHHHHhhcC
Q psy15362 121 EEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELI-ARTHKEYQDIAIRLGTD 198 (200)
Q Consensus 121 ~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~i-a~~~~~yv~~a~~l~~d 198 (200)
+++..+|+.||+++.|+..++ |++++|||+||+|||+++.....+ ++. .+...++ ..|.+++++...++++|
T Consensus 89 ~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e-----~i~-~~~~g~~~~~d~~~l~~~i~~l~~~ 162 (177)
T 2f9f_A 89 EELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKE-----TVI-NEKTGYLVNADVNEIIDAMKKVSKN 162 (177)
T ss_dssp HHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHH-----HCC-BTTTEEEECSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHH-----Hhc-CCCccEEeCCCHHHHHHHHHHHHhC
Confidence 999999999999999886654 999999999999999976432211 111 1333444 58999999999999988
Q ss_pred CC
Q psy15362 199 RD 200 (200)
Q Consensus 199 ~e 200 (200)
++
T Consensus 163 ~~ 164 (177)
T 2f9f_A 163 PD 164 (177)
T ss_dssp TT
T ss_pred HH
Confidence 74
No 17
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.83 E-value=1.6e-20 Score=160.16 Aligned_cols=159 Identities=14% Similarity=0.117 Sum_probs=124.6
Q ss_pred eecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCC---CCCCHHHHHHHHHHHHHCCCcEEEEEcCC
Q psy15362 15 VLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQL---YKIDPSTLQMWVNVLKAVPNSILWLLKFP 91 (200)
Q Consensus 15 ~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~---~K~~~~~l~a~~~i~~~~p~~~l~ivG~~ 91 (200)
+|+||+|.+.|.+.. ...+++++..+++++|+. .|+.+.+++++.++.++.|+.+|+++|.+
T Consensus 185 vi~~~v~~~~~~~~~---------------~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~ 249 (406)
T 2gek_A 185 EIPNGVDVASFADAP---------------LLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRG 249 (406)
T ss_dssp ECCCCBCHHHHHTCC---------------CCTTCSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCS
T ss_pred EecCCCChhhcCCCc---------------hhhhccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 789999987664321 112334455678888887 58999999999999999999999999974
Q ss_pred cccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCC-CCC-chHHHHHHHcCCCeeecCCCcchhhhHH
Q psy15362 92 AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNG-HTTSMDVLWTGTPVVTLPGETLASRVAA 169 (200)
Q Consensus 92 ~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~-~~~-g~~~lEAma~G~PVV~~~g~~~~~r~~~ 169 (200)
+. +.++++++++ . ++|+|+|+++.+++..+|+.||++|.|+. .++ |++++|||+||+|||+++.....+
T Consensus 250 -~~-~~l~~~~~~~--~-~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e---- 320 (406)
T 2gek_A 250 -DE-DELREQAGDL--A-GHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRR---- 320 (406)
T ss_dssp -CH-HHHHHHTGGG--G-GGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHH----
T ss_pred -cH-HHHHHHHHhc--c-CcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHH----
Confidence 55 7888888876 5 99999999999999999999999999974 554 999999999999999976532211
Q ss_pred HHHhhcCCCccee--cCHHHHHHHHHHhhcCC
Q psy15362 170 SQLATLGCPELIA--RTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 170 ~~~~~~g~~~~ia--~~~~~yv~~a~~l~~d~ 199 (200)
++ ..|...++. .|.+++++...++++|+
T Consensus 321 -~i-~~~~~g~~~~~~d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 321 -VL-ADGDAGRLVPVDDADGMAAALIGILEDD 350 (406)
T ss_dssp -HH-TTTTSSEECCTTCHHHHHHHHHHHHHCH
T ss_pred -Hh-cCCCceEEeCCCCHHHHHHHHHHHHcCH
Confidence 22 224455555 78999999999988775
No 18
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.81 E-value=7e-20 Score=164.60 Aligned_cols=143 Identities=11% Similarity=-0.012 Sum_probs=107.6
Q ss_pred eeecccccccccCCCCCCCCC--C--C------chhhhhhhhhcCCCC--CCEEEEEeCCC--CCCCHHHHHHHHHHHHH
Q psy15362 14 IVLQNGLATNQTNTKTATGEE--V--P------QSIVITSRQQYGLPE--DAIVYCNFNQL--YKIDPSTLQMWVNVLKA 79 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~~~--~--~------~~~~~~~R~~l~l~~--~~~v~~~~~r~--~K~~~~~l~a~~~i~~~ 79 (200)
..|+||+|++.|.+.....-. . . ...+..+++++|++. +.+++++++|+ .|+++.+++++.+++++
T Consensus 276 ~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~ 355 (536)
T 3vue_A 276 TGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE 355 (536)
T ss_dssp EECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS
T ss_pred EEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh
Confidence 358999999998764321111 1 0 011345677888874 56889999996 69999999999998764
Q ss_pred CCCcEEEEEcCCcc-cHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeee
Q psy15362 80 VPNSILWLLKFPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVT 157 (200)
Q Consensus 80 ~p~~~l~ivG~~~~-~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~ 157 (200)
+.+++++|.+.. ....++..... +. +++.|.+..+.++...+|+.||+||.||.+|+ |++++|||+||+|||+
T Consensus 356 --~~~l~l~G~G~~~~~~~~~~~~~~--~~-~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~ 430 (536)
T 3vue_A 356 --DVQIVLLGTGKKKFEKLLKSMEEK--YP-GKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCAC 430 (536)
T ss_dssp --SCEEEEECCBCHHHHHHHHHHHHH--ST-TTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEE
T ss_pred --CCeEEEEeccCchHHHHHHHHHhh--cC-CceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEE
Confidence 567888886422 22344555544 44 78999999998888899999999999998875 9999999999999999
Q ss_pred cCCC
Q psy15362 158 LPGE 161 (200)
Q Consensus 158 ~~g~ 161 (200)
++-.
T Consensus 431 s~~g 434 (536)
T 3vue_A 431 ASTG 434 (536)
T ss_dssp CSCT
T ss_pred cCCC
Confidence 7644
No 19
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.81 E-value=1.7e-19 Score=136.62 Aligned_cols=135 Identities=13% Similarity=0.095 Sum_probs=106.5
Q ss_pred CEEEEEeCCC--CCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccc
Q psy15362 53 AIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLA 130 (200)
Q Consensus 53 ~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~a 130 (200)
.++++++||. .|+++.+++++.++ ++.|+.+|+++|. ++..+.++++++++++ +++| |+++.+++..+|+.|
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~~~l~i~G~-g~~~~~~~~~~~~~~~---~v~~-g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQDIVLLLKGK-GPDEKKIKLLAQKLGV---KAEF-GFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGGEEEEEECC-STTHHHHHHHHHHHTC---EEEC-CCCCHHHHHHHHTTC
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCCeEEEEEeC-CccHHHHHHHHHHcCC---eEEE-eecCHHHHHHHHHhC
Confidence 4678888885 69999999999987 4458999999997 4677899999999887 5899 999999999999999
Q ss_pred cEEEeCCCCCC-chHHHHHHHcCC-Ceeec-CCCcchhhhHHHHHhhcCCCcceecCHHHHHHHHHHhhcCC
Q psy15362 131 DVCLDTPLCNG-HTTSMDVLWTGT-PVVTL-PGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 131 Dv~l~~~~~~~-g~~~lEAma~G~-PVV~~-~g~~~~~r~~~~~~~~~g~~~~ia~~~~~yv~~a~~l~~d~ 199 (200)
|+++.||.+++ |++++|||+||+ |||++ ......+-.. ..+. -+...|.+++.+...++.+|+
T Consensus 76 dv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~-----~~~~-~~~~~~~~~l~~~i~~l~~~~ 141 (166)
T 3qhp_A 76 TLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFAL-----DERS-LFEPNNAKDLSAKIDWWLENK 141 (166)
T ss_dssp SEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCS-----SGGG-EECTTCHHHHHHHHHHHHHCH
T ss_pred CEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhcc-----CCce-EEcCCCHHHHHHHHHHHHhCH
Confidence 99999997765 999999999997 99994 3332222111 1111 123368899999988888775
No 20
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.80 E-value=6.8e-19 Score=147.66 Aligned_cols=152 Identities=13% Similarity=0.043 Sum_probs=115.3
Q ss_pred CeeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCC--CCCCHHHHHHHHHHHHHCCCcEEEEEcC
Q psy15362 13 GIVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLLKF 90 (200)
Q Consensus 13 gi~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p~~~l~ivG~ 90 (200)
-.+|+||+|++.|.+... ..+ +..+++++||. .|+++.+++++.++ +.+|+++|.
T Consensus 140 ~~vi~ngvd~~~~~~~~~-----------------~~~-~~~~i~~vG~~~~~Kg~~~li~a~~~~-----~~~l~i~G~ 196 (342)
T 2iuy_A 140 APVIPIPVDPARYRSAAD-----------------QVA-KEDFLLFMGRVSPHKGALEAAAFAHAC-----GRRLVLAGP 196 (342)
T ss_dssp SCBCCCCBCGGGSCCSTT-----------------CCC-CCSCEEEESCCCGGGTHHHHHHHHHHH-----TCCEEEESC
T ss_pred eEEEcCCCChhhcCcccc-----------------cCC-CCCEEEEEeccccccCHHHHHHHHHhc-----CcEEEEEeC
Confidence 356899999887643210 122 23356677775 69999999999876 799999997
Q ss_pred CcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCC----------CCC-chHHHHHHHcCCCeeecC
Q psy15362 91 PAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL----------CNG-HTTSMDVLWTGTPVVTLP 159 (200)
Q Consensus 91 ~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~----------~~~-g~~~lEAma~G~PVV~~~ 159 (200)
+ +..+.+++++++++ ++|+|+|+++++++..+|+.||+++.||. .++ |++++|||+||+|||+++
T Consensus 197 g-~~~~~l~~~~~~~~---~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~ 272 (342)
T 2iuy_A 197 A-WEPEYFDEITRRYG---STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTG 272 (342)
T ss_dssp C-CCHHHHHHHHHHHT---TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECC
T ss_pred c-ccHHHHHHHHHHhC---CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcC
Confidence 4 67888999998876 78999999999999999999999999998 565 999999999999999987
Q ss_pred CCcchhhhHHHHHhhc-CCCcceec-CHHHHHHHHHHhh
Q psy15362 160 GETLASRVAASQLATL-GCPELIAR-THKEYQDIAIRLG 196 (200)
Q Consensus 160 g~~~~~r~~~~~~~~~-g~~~~ia~-~~~~yv~~a~~l~ 196 (200)
.....+ ++... |...++.+ |.+++.+...+++
T Consensus 273 ~~~~~e-----~~~~~~~~~g~~~~~d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 273 NGCLAE-----IVPSVGEVVGYGTDFAPDEARRTLAGLP 306 (342)
T ss_dssp TTTHHH-----HGGGGEEECCSSSCCCHHHHHHHHHTSC
T ss_pred CCChHH-----HhcccCCCceEEcCCCHHHHHHHHHHHH
Confidence 543322 22220 33445555 8888888877664
No 21
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.80 E-value=2.8e-19 Score=155.75 Aligned_cols=130 Identities=7% Similarity=-0.036 Sum_probs=101.6
Q ss_pred EEEEeCC---CCCCCHHHHHHHHHHHHHCCC---cEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc
Q psy15362 55 VYCNFNQ---LYKIDPSTLQMWVNVLKAVPN---SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ 128 (200)
Q Consensus 55 v~~~~~r---~~K~~~~~l~a~~~i~~~~p~---~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~ 128 (200)
.+++++| ..|+.+.+++|++.+.++.|+ .+|+++|++ +.+ .++++. ++|+|+|+++.+++..+|+
T Consensus 243 ~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~-~~~-------~~l~~~-~~v~f~G~~~~~~l~~~~~ 313 (413)
T 2x0d_A 243 IILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEK-HKD-------IALGKG-IHLNSLGKLTLEDYADLLK 313 (413)
T ss_dssp EEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESC-CCC-------EEEETT-EEEEEEESCCHHHHHHHHH
T ss_pred EEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCC-chh-------hhcCCc-CcEEEcCCCCHHHHHHHHH
Confidence 3445555 358899999999999988886 899999974 332 356776 8999999999999999999
Q ss_pred cccEEEeCCCCC-CchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCccee--cCHHHHHHHHHHhhcCCC
Q psy15362 129 LADVCLDTPLCN-GHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDRD 200 (200)
Q Consensus 129 ~aDv~l~~~~~~-~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia--~~~~~yv~~a~~l~~d~e 200 (200)
.||+|+.||.++ .|++++||||||+|||+..|.. .+ ++. .|..+++. .|.+++++...+|++|++
T Consensus 314 ~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~~g~-~e-----~v~-~~~~G~lv~~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 314 RSSIGISLMISPHPSYPPLEMAHFGLRVITNKYEN-KD-----LSN-WHSNIVSLEQLNPENIAETLVELCMSFN 381 (413)
T ss_dssp HCCEEECCCSSSSCCSHHHHHHHTTCEEEEECBTT-BC-----GGG-TBTTEEEESSCSHHHHHHHHHHHHHHTC
T ss_pred hCCEEEEecCCCCCCcHHHHHHhCCCcEEEeCCCc-ch-----hhh-cCCCEEEeCCCCHHHHHHHHHHHHcCHH
Confidence 999999999754 5999999999999999965532 11 111 24444433 689999999999988764
No 22
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.76 E-value=2.6e-18 Score=152.67 Aligned_cols=171 Identities=15% Similarity=0.117 Sum_probs=119.3
Q ss_pred eeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCC--CCCCHHHHHHHHHHHHHCCC----cEEEE
Q psy15362 14 IVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPN----SILWL 87 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p~----~~l~i 87 (200)
.+||||||++.|.+....+ . ... ...+|++++ +..++++++|+ .|+++.+++||.+++++.|+ ++|++
T Consensus 222 ~vip~GID~~~f~~~~~~~-~-~~~-~~~lr~~~~---~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~ 295 (482)
T 1uqt_A 222 EVYPIGIEPKEIAKQAAGP-L-PPK-LAQLKAELK---NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQ 295 (482)
T ss_dssp EECCCCCCHHHHHHHHHSC-C-CHH-HHHHHHHTT---TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEE
T ss_pred EEEeccCCHHHHHHHhcCc-c-hHH-HHHHHHHhC---CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEE
Confidence 4699999998875321111 0 111 356788886 56788899986 69999999999999999885 67999
Q ss_pred EcCC----ccc----HHHHHHHHHHc----CCC-CCcEE-EeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcC
Q psy15362 88 LKFP----AVG----EANIQATAQAL----GLD-QHRIL-FSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTG 152 (200)
Q Consensus 88 vG~~----~~~----~~~l~~~~~~~----gl~-~~rv~-f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G 152 (200)
+|.+ ++. ++++++++.+. |.. -..|+ |.|.++.+++..+|+.||+||.||.++| |++++||||||
T Consensus 296 vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g 375 (482)
T 1uqt_A 296 IAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375 (482)
T ss_dssp ECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHS
T ss_pred EECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhC
Confidence 9852 121 23445555442 221 01355 5789999999999999999999997765 99999999999
Q ss_pred C-----CeeecCCCcchhhhHHHHHhhcCCCccee--cCHHHHHHHHHHhhcCC
Q psy15362 153 T-----PVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 153 ~-----PVV~~~g~~~~~r~~~~~~~~~g~~~~ia--~~~~~yv~~a~~l~~d~ 199 (200)
+ |||++.-..... .+. ..++. .|.+++.+...++++++
T Consensus 376 ~~~~~gpvV~S~~~G~~~--------~l~-~g~lv~p~d~~~lA~ai~~lL~~~ 420 (482)
T 1uqt_A 376 DPANPGVLVLSQFAGAAN--------ELT-SALIVNPYDRDEVAAALDRALTMS 420 (482)
T ss_dssp CTTSCCEEEEETTBGGGG--------TCT-TSEEECTTCHHHHHHHHHHHHTCC
T ss_pred CCCCCCCEEEECCCCCHH--------HhC-CeEEECCCCHHHHHHHHHHHHcCC
Confidence 8 788764211111 111 23444 48889988888888754
No 23
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.75 E-value=4.1e-18 Score=147.69 Aligned_cols=142 Identities=10% Similarity=0.047 Sum_probs=109.6
Q ss_pred CeeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCC-EEEEEeCCCC--CCCHHHHHHHHHHHHHCCCcEEEEEc
Q psy15362 13 GIVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDA-IVYCNFNQLY--KIDPSTLQMWVNVLKAVPNSILWLLK 89 (200)
Q Consensus 13 gi~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~-~v~~~~~r~~--K~~~~~l~a~~~i~~~~p~~~l~ivG 89 (200)
-.+|+||+|++.|.+.. +. +.+. .+++++||.. |+. +..+.++.|+.+|+|+|
T Consensus 199 i~vipngvd~~~f~~~~--------------~~----~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~l~ivG 254 (406)
T 2hy7_A 199 VFHVGHGVDHNLDQLGD--------------PS----PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVTFHVIG 254 (406)
T ss_dssp EEECCCCBCTTHHHHHC--------------SC----SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEEEEEES
T ss_pred EEEEcCCcChHhcCccc--------------cc----ccCCCcEEEEEeccccccCH------HHHHHHhCCCeEEEEEe
Confidence 35689999988764211 00 2233 7788999875 543 56666778999999999
Q ss_pred CCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHH-------HcCCCeeecCCC
Q psy15362 90 FPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVL-------WTGTPVVTLPGE 161 (200)
Q Consensus 90 ~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAm-------a~G~PVV~~~g~ 161 (200)
++ + ++++++. ++|+|+|+++.+++..+|+.||+++.||..++ |++++||| |||+|||+++.
T Consensus 255 ~g-~--------~~~~~l~-~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~- 323 (406)
T 2hy7_A 255 SG-M--------GRHPGYG-DNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA- 323 (406)
T ss_dssp CS-S--------CCCTTCC-TTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG-
T ss_pred Cc-h--------HHhcCCC-CCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh-
Confidence 64 4 5667887 99999999999999999999999999997765 99999999 99999999753
Q ss_pred cchhhhHHHHHhhcCCCcce--e-cCHHHHHHHHHHhhcCCC
Q psy15362 162 TLASRVAASQLATLGCPELI--A-RTHKEYQDIAIRLGTDRD 200 (200)
Q Consensus 162 ~~~~r~~~~~~~~~g~~~~i--a-~~~~~yv~~a~~l~~d~e 200 (200)
+. .+..+++ . .|.+++++...++++|++
T Consensus 324 ----------v~-~~~~G~l~v~~~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 324 ----------VV-GPYKSRFGYTPGNADSVIAAITQALEAPR 354 (406)
T ss_dssp ----------GT-CSCSSEEEECTTCHHHHHHHHHHHHHCCC
T ss_pred ----------cc-cCcceEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 11 1333444 3 689999999999998874
No 24
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.72 E-value=3.1e-17 Score=138.65 Aligned_cols=160 Identities=11% Similarity=0.089 Sum_probs=112.8
Q ss_pred eeccc-ccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCCC---CCCHHHHHHHHHHHHHCCCcEEEEEcC
Q psy15362 15 VLQNG-LATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQLY---KIDPSTLQMWVNVLKAVPNSILWLLKF 90 (200)
Q Consensus 15 ~i~ng-~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~~---K~~~~~l~a~~~i~~~~p~~~l~ivG~ 90 (200)
+++|| +|...|.+... .....|+++ +++.+++++++|.. |+.+.+++++.++.++.|+.++++ |.
T Consensus 177 vi~n~~~d~~~~~~~~~--------~~~~~~~~~--~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~ 245 (375)
T 3beo_A 177 ITGNTAIDALKTTVKET--------YSHPVLEKL--GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PV 245 (375)
T ss_dssp ECCCHHHHHHHHHCCSS--------CCCHHHHTT--TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-EC
T ss_pred EECChhHhhhhhhhhhh--------hhHHHHHhc--cCCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eC
Confidence 57888 77765432210 012345554 45567778888863 889999999999998899999655 53
Q ss_pred CcccHHHHHHHHHHc-CCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCC-CcchhhhH
Q psy15362 91 PAVGEANIQATAQAL-GLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG-ETLASRVA 168 (200)
Q Consensus 91 ~~~~~~~l~~~~~~~-gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g-~~~~~r~~ 168 (200)
+ +. +.+++.++++ +.. ++|+|+|+++..++..+|+.||+++.|| |.+++|||+||+|||+++. ....+
T Consensus 246 g-~~-~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~v~~s----g~~~lEA~a~G~Pvi~~~~~~~~~e--- 315 (375)
T 3beo_A 246 H-MN-PVVRETANDILGDY-GRIHLIEPLDVIDFHNVAARSYLMLTDS----GGVQEEAPSLGVPVLVLRDTTERPE--- 315 (375)
T ss_dssp C-SC-HHHHHHHHHHHTTC-TTEEEECCCCHHHHHHHHHTCSEEEECC----HHHHHHHHHHTCCEEECSSCCSCHH---
T ss_pred C-CC-HHHHHHHHHHhhcc-CCEEEeCCCCHHHHHHHHHhCcEEEECC----CChHHHHHhcCCCEEEecCCCCCce---
Confidence 3 33 3455555443 444 7999999999889999999999999887 5669999999999998732 21211
Q ss_pred HHHHhhcCCCcce-ecCHHHHHHHHHHhhcCC
Q psy15362 169 ASQLATLGCPELI-ARTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 169 ~~~~~~~g~~~~i-a~~~~~yv~~a~~l~~d~ 199 (200)
++ ..| ..++ ..|.+++.+...++++|+
T Consensus 316 --~v-~~g-~g~~v~~d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 316 --GI-EAG-TLKLAGTDEETIFSLADELLSDK 343 (375)
T ss_dssp --HH-HTT-SEEECCSCHHHHHHHHHHHHHCH
T ss_pred --ee-cCC-ceEEcCCCHHHHHHHHHHHHhCh
Confidence 22 235 4444 368999999999988875
No 25
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.71 E-value=5.1e-17 Score=144.35 Aligned_cols=167 Identities=8% Similarity=0.010 Sum_probs=115.2
Q ss_pred eeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCEEEEEeCCC--CCCCHHHHHHHHHHHHHCCC---cEEEEE
Q psy15362 14 IVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPN---SILWLL 88 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p~---~~l~iv 88 (200)
.++|+|||++.|.+... ..+..+|++++ +..++++++|+ .|+++.+++|| ++++++|+ ++|+++
T Consensus 252 ~viP~GID~~~f~~~~~-------~~~~~lr~~~~---~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~V 320 (496)
T 3t5t_A 252 RTMPLGYSPLTLDGRNP-------QLPEGIEEWAD---GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVR 320 (496)
T ss_dssp EECCCCBCGGGC----C-------CCCTTHHHHHT---TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEE
T ss_pred EEeccEeCHHHhchhhH-------HHHHHHHHHhC---CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEE
Confidence 46999999999865432 12256788887 56777788886 69999999999 99999997 568888
Q ss_pred cCC----cccHH----HHHHHHHHcCCC--CCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcC---CC
Q psy15362 89 KFP----AVGEA----NIQATAQALGLD--QHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTG---TP 154 (200)
Q Consensus 89 G~~----~~~~~----~l~~~~~~~gl~--~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G---~P 154 (200)
|.+ ++..+ ++++++.+.+.. ..+|+|+|.++.+++..+|+.||+|+.||.++| |++.+|||||| .|
T Consensus 321 g~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~ 400 (496)
T 3t5t_A 321 MNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDAD 400 (496)
T ss_dssp EECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCE
T ss_pred ECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCC
Confidence 732 12223 344454443211 027999999999999999999999999997765 99999999996 67
Q ss_pred eeecCCCcchhhhHHHHHhhcCCCccee--cCHHHHHHHHHHhhcCC
Q psy15362 155 VVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 155 VV~~~g~~~~~r~~~~~~~~~g~~~~ia--~~~~~yv~~a~~l~~d~ 199 (200)
+|.+.-..... .+ +-..++. .|.+++.+...++++++
T Consensus 401 lVlSe~aGa~~-----~l---~~~allVnP~D~~~lA~AI~~aL~m~ 439 (496)
T 3t5t_A 401 VILSETCGAAE-----VL---GEYCRSVNPFDLVEQAEAISAALAAG 439 (496)
T ss_dssp EEEETTBTTHH-----HH---GGGSEEECTTBHHHHHHHHHHHHHCC
T ss_pred EEEeCCCCCHH-----Hh---CCCEEEECCCCHHHHHHHHHHHHcCC
Confidence 77653221111 11 1122333 47888888887777655
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.67 E-value=1.5e-16 Score=134.98 Aligned_cols=143 Identities=9% Similarity=0.050 Sum_probs=106.1
Q ss_pred hhhhhcC-CCC-CCEEEEEeCCCC---CCCHHHHHHHHHHHHHCCCcEEEEEcCCcc-cHHHHHHHHHHcCCCCCcEEEe
Q psy15362 42 TSRQQYG-LPE-DAIVYCNFNQLY---KIDPSTLQMWVNVLKAVPNSILWLLKFPAV-GEANIQATAQALGLDQHRILFS 115 (200)
Q Consensus 42 ~~R~~l~-l~~-~~~v~~~~~r~~---K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~-~~~~l~~~~~~~gl~~~rv~f~ 115 (200)
..|+++| +++ +.+++++++|.. |+.+.+++++.++.++.|+.++++++++++ ..+.+++++ +.. ++|+|+
T Consensus 193 ~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~---~~~-~~v~~~ 268 (384)
T 1vgv_A 193 ELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRIL---GHV-KNVILI 268 (384)
T ss_dssp HHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHH---TTC-TTEEEE
T ss_pred HHHHhccccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHh---hcC-CCEEEe
Confidence 5678888 855 446778888753 788999999999999899999988643222 234444443 334 789999
Q ss_pred ccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCC-CcchhhhHHHHHhhcCCCccee-cCHHHHHHHHH
Q psy15362 116 NVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG-ETLASRVAASQLATLGCPELIA-RTHKEYQDIAI 193 (200)
Q Consensus 116 g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g-~~~~~r~~~~~~~~~g~~~~ia-~~~~~yv~~a~ 193 (200)
|+++.+++..+|+.||+++.+| |+ +++|||+||+|||+++. ....+ ++. .| ..++. .|.+++.+...
T Consensus 269 g~~~~~~~~~~~~~ad~~v~~S---g~-~~lEA~a~G~PvI~~~~~~~~~e-----~v~-~g-~g~lv~~d~~~la~~i~ 337 (384)
T 1vgv_A 269 DPQEYLPFVWLMNHAWLILTDS---GG-IQEEAPSLGKPVLVMRDTTERPE-----AVT-AG-TVRLVGTDKQRIVEEVT 337 (384)
T ss_dssp CCCCHHHHHHHHHHCSEEEESS---ST-GGGTGGGGTCCEEEESSCCSCHH-----HHH-HT-SEEEECSSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhCcEEEECC---cc-hHHHHHHcCCCEEEccCCCCcch-----hhh-CC-ceEEeCCCHHHHHHHHH
Confidence 9999889999999999999988 34 48999999999998753 22211 222 25 44443 58999999999
Q ss_pred HhhcCC
Q psy15362 194 RLGTDR 199 (200)
Q Consensus 194 ~l~~d~ 199 (200)
++++|+
T Consensus 338 ~ll~d~ 343 (384)
T 1vgv_A 338 RLLKDE 343 (384)
T ss_dssp HHHHCH
T ss_pred HHHhCh
Confidence 988876
No 27
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.67 E-value=3.7e-16 Score=134.17 Aligned_cols=138 Identities=11% Similarity=0.045 Sum_probs=102.1
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccH-HHHHHHHHHcCCCC-------CcEEEeccCCHHHHHhh
Q psy15362 55 VYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGE-ANIQATAQALGLDQ-------HRILFSNVAAKEEHVRR 126 (200)
Q Consensus 55 v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~-~~l~~~~~~~gl~~-------~rv~f~g~~~~~~~~~~ 126 (200)
++.+.++..|+.+.++++|.++.++.|+.+|+|+|++ +.+ +.++++++++|+.. ++|.|.|++ +|+..+
T Consensus 198 vi~~~~~~~k~~~~ll~A~~~l~~~~p~~~lvivG~g-~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~ 274 (374)
T 2xci_A 198 FIVAGSIHTGEVEIILKAFKEIKKTYSSLKLILVPRH-IENAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKEL 274 (374)
T ss_dssp EEEEEEECGGGHHHHHHHHHHHHTTCTTCEEEEEESS-GGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHH
T ss_pred EEEEEeCCCchHHHHHHHHHHHHhhCCCcEEEEECCC-HHHHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHH
Confidence 3444556678899999999999999999999999964 555 58999999999851 368888876 588899
Q ss_pred cccccEEEeCCCC-C-CchHHHHHHHcCCCeeec-CCCcchhhhHHHHHhhcCCCcceecCHHHHHHHHHHhhcC
Q psy15362 127 GQLADVCLDTPLC-N-GHTTSMDVLWTGTPVVTL-PGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTD 198 (200)
Q Consensus 127 ~~~aDv~l~~~~~-~-~g~~~lEAma~G~PVV~~-~g~~~~~r~~~~~~~~~g~~~~ia~~~~~yv~~a~~l~~d 198 (200)
|+.||+++.++++ + +|++++||||||+|||+. ....+.+-.. .+...|. .+...|.+++.+...+|++|
T Consensus 275 y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~--~~~~~G~-l~~~~d~~~La~ai~~ll~d 346 (374)
T 2xci_A 275 YPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKE--FLEKEGA-GFEVKNETELVTKLTELLSV 346 (374)
T ss_dssp GGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHH--HHHHTTC-EEECCSHHHHHHHHHHHHHS
T ss_pred HHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHH--HHHHCCC-EEEeCCHHHHHHHHHHHHhH
Confidence 9999998776543 4 589999999999999974 2222222111 1111232 13347899999999999877
No 28
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.64 E-value=8e-16 Score=129.62 Aligned_cols=157 Identities=13% Similarity=0.080 Sum_probs=107.0
Q ss_pred eeecccccccccCCCCCCCCCCCchhhhhhhhhcCCCCCCE-EEEEeCCC--CCCCHHHHHHHHHHHHHCCCcE-EEEEc
Q psy15362 14 IVLQNGLATNQTNTKTATGEEVPQSIVITSRQQYGLPEDAI-VYCNFNQL--YKIDPSTLQMWVNVLKAVPNSI-LWLLK 89 (200)
Q Consensus 14 i~i~ng~~~~~~~~~~~~~~~~~~~~~~~~R~~l~l~~~~~-v~~~~~r~--~K~~~~~l~a~~~i~~~~p~~~-l~ivG 89 (200)
.+++||++.+.|.+. ..|++++++++.. ++++.|+. .|+.+.+++++.++.+ +.+ ++++|
T Consensus 157 ~~i~n~v~~~~~~~~-------------~~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~---~~~~l~i~G 220 (364)
T 1f0k_A 157 EVVGNPVRTDVLALP-------------LPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD---SVTIWHQSG 220 (364)
T ss_dssp EECCCCCCHHHHTSC-------------CHHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG---GEEEEEECC
T ss_pred eEeCCccchhhcccc-------------hhhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC---CcEEEEEcC
Confidence 367888877654211 1346778877665 45555665 4777888899988754 677 55677
Q ss_pred CCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchh--hh
Q psy15362 90 FPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLAS--RV 167 (200)
Q Consensus 90 ~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~--r~ 167 (200)
.+ + .+.++++++++|+ ++|+|+|++ +++..+|+.||+++.|| ||++++|||+||+|||+++-....+ ..
T Consensus 221 ~~-~-~~~l~~~~~~~~~--~~v~~~g~~--~~~~~~~~~ad~~v~~s---g~~~~~EAma~G~Pvi~~~~~g~~~~q~~ 291 (364)
T 1f0k_A 221 KG-S-QQSVEQAYAEAGQ--PQHKVTEFI--DDMAAAYAWADVVVCRS---GALTVSEIAAAGLPALFVPFQHKDRQQYW 291 (364)
T ss_dssp TT-C-HHHHHHHHHHTTC--TTSEEESCC--SCHHHHHHHCSEEEECC---CHHHHHHHHHHTCCEEECCCCCTTCHHHH
T ss_pred Cc-h-HHHHHHHHhhcCC--CceEEecch--hhHHHHHHhCCEEEECC---chHHHHHHHHhCCCEEEeeCCCCchhHHH
Confidence 53 4 5788999999887 569999999 57788899999999987 4899999999999999986432211 11
Q ss_pred HHHHHhhcCCCccee-cC--HHHHHHHHHHh
Q psy15362 168 AASQLATLGCPELIA-RT--HKEYQDIAIRL 195 (200)
Q Consensus 168 ~~~~~~~~g~~~~ia-~~--~~~yv~~a~~l 195 (200)
-+..+...|..-++. .| .+++.+...++
T Consensus 292 ~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l 322 (364)
T 1f0k_A 292 NALPLEKAGAAKIIEQPQLSVDAVANTLAGW 322 (364)
T ss_dssp HHHHHHHTTSEEECCGGGCCHHHHHHHHHTC
T ss_pred HHHHHHhCCcEEEeccccCCHHHHHHHHHhc
Confidence 112333445522333 23 67777766655
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.58 E-value=8.2e-15 Score=124.21 Aligned_cols=135 Identities=13% Similarity=0.076 Sum_probs=98.4
Q ss_pred CCCEEEEEeCCC--CCCCHHHHHHHHHHHHHCCCcEEEEE-cCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc
Q psy15362 51 EDAIVYCNFNQL--YKIDPSTLQMWVNVLKAVPNSILWLL-KFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG 127 (200)
Q Consensus 51 ~~~~v~~~~~r~--~K~~~~~l~a~~~i~~~~p~~~l~iv-G~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~ 127 (200)
++.+++++++|. .|+++.+++++.++.++.|+.+++++ |+++..++.++++++ .. ++|+|+|+++..++..+|
T Consensus 197 ~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~---~~-~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLK---GV-RNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHT---TC-TTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhc---cC-CCEEEECCCCHHHHHHHH
Confidence 456777778875 46788999999999888999999886 532223456666553 24 789999999877999999
Q ss_pred ccccEEEeCCCCCCchHHHHHHHcCCCeeecCC-CcchhhhHHHHHhhcCCCcceecCHHHHHHHHHHhhcCC
Q psy15362 128 QLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG-ETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 128 ~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g-~~~~~r~~~~~~~~~g~~~~ia~~~~~yv~~a~~l~~d~ 199 (200)
+.||+++.+| +|+ ++|||+||+|||+++. ....+ +++ .|..-++..|.+++.+...++++|+
T Consensus 273 ~~ad~~v~~S---~g~-~lEA~a~G~PvI~~~~~~~~~~-----~~~-~g~g~lv~~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 273 RASLLLVTDS---GGL-QEEGAALGVPVVVLRNVTERPE-----GLK-AGILKLAGTDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HTEEEEEESC---HHH-HHHHHHTTCCEEECSSSCSCHH-----HHH-HTSEEECCSCHHHHHHHHHHHHTCH
T ss_pred HhCcEEEECC---cCH-HHHHHHcCCCEEeccCCCcchh-----hhc-CCceEECCCCHHHHHHHHHHHHhCh
Confidence 9999999887 455 8899999999998532 21111 121 2322233368999999999988876
No 30
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.47 E-value=1e-13 Score=126.50 Aligned_cols=61 Identities=10% Similarity=0.058 Sum_probs=48.1
Q ss_pred HHHHHcCCCCCc------EEEe-ccCCHH------HHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeecCCC
Q psy15362 100 ATAQALGLDQHR------ILFS-NVAAKE------EHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTLPGE 161 (200)
Q Consensus 100 ~~~~~~gl~~~r------v~f~-g~~~~~------~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~~g~ 161 (200)
+.++++++. ++ |+|. ++++.. ++..+|+.||+||.||.+|+ |++++||||||+|||+++-.
T Consensus 477 ~~~r~l~L~-N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 477 NKIRQVQLF-NSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp HHHHHHTCC-CCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred HHHHhcCCC-CCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 344667776 55 5665 566654 57889999999999998775 99999999999999997644
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.46 E-value=4.6e-13 Score=115.74 Aligned_cols=145 Identities=14% Similarity=0.105 Sum_probs=101.6
Q ss_pred hhhhhhcC-CCC-CCEEEEEeCCC---CCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHH-cCCCCCcEEE
Q psy15362 41 ITSRQQYG-LPE-DAIVYCNFNQL---YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQA-LGLDQHRILF 114 (200)
Q Consensus 41 ~~~R~~l~-l~~-~~~v~~~~~r~---~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~-~gl~~~rv~f 114 (200)
..+|++|| +++ +.+++++.+|. .|+.+.+++++.++.++.|+.++++.++.+ +.+++.+++ .+.. ++|+|
T Consensus 217 ~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~---~~~~~~l~~~~~~~-~~v~~ 292 (396)
T 3dzc_A 217 ATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN---PNVREPVNKLLKGV-SNIVL 292 (396)
T ss_dssp HHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC---HHHHHHHHHHTTTC-TTEEE
T ss_pred HHHHHHhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC---hHHHHHHHHHHcCC-CCEEE
Confidence 56788899 454 44555555453 366678999999999999999998864322 233444433 3555 79999
Q ss_pred eccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCC-CcchhhhHHHHHhhcCCCcceecCHHHHHHHHH
Q psy15362 115 SNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG-ETLASRVAASQLATLGCPELIARTHKEYQDIAI 193 (200)
Q Consensus 115 ~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g-~~~~~r~~~~~~~~~g~~~~ia~~~~~yv~~a~ 193 (200)
++++++.++..+|+.||+++.+| ||++ +|||++|+|||+++. ....+ .+ ..|-.-++..|.+++.+.+.
T Consensus 293 ~~~lg~~~~~~l~~~ad~vv~~S---Gg~~-~EA~a~G~PvV~~~~~~~~~e-----~v-~~G~~~lv~~d~~~l~~ai~ 362 (396)
T 3dzc_A 293 IEPQQYLPFVYLMDRAHIILTDS---GGIQ-EEAPSLGKPVLVMRETTERPE-----AV-AAGTVKLVGTNQQQICDALS 362 (396)
T ss_dssp ECCCCHHHHHHHHHHCSEEEESC---SGGG-TTGGGGTCCEEECCSSCSCHH-----HH-HHTSEEECTTCHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHhcCEEEECC---ccHH-HHHHHcCCCEEEccCCCcchH-----HH-HcCceEEcCCCHHHHHHHHH
Confidence 99999889999999999999876 3444 999999999998632 11111 12 22433344457889998888
Q ss_pred HhhcCC
Q psy15362 194 RLGTDR 199 (200)
Q Consensus 194 ~l~~d~ 199 (200)
++++|+
T Consensus 363 ~ll~d~ 368 (396)
T 3dzc_A 363 LLLTDP 368 (396)
T ss_dssp HHHHCH
T ss_pred HHHcCH
Confidence 888775
No 32
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.38 E-value=1.4e-12 Score=113.13 Aligned_cols=142 Identities=12% Similarity=0.116 Sum_probs=99.2
Q ss_pred hhhhhcCCCCCCEEEEEeCCC---CCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHH-cCCCCCcEEEecc
Q psy15362 42 TSRQQYGLPEDAIVYCNFNQL---YKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQA-LGLDQHRILFSNV 117 (200)
Q Consensus 42 ~~R~~l~l~~~~~v~~~~~r~---~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~-~gl~~~rv~f~g~ 117 (200)
..++++ +++.+++++.+|. .|+.+.+++++.++.++.|+.++++.+++++ .+++.+++ ++.. ++|+|+++
T Consensus 216 ~~~~~l--~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~---~~~~~l~~~~~~~-~~v~l~~~ 289 (403)
T 3ot5_A 216 PILENL--GDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNP---AVREKAMAILGGH-ERIHLIEP 289 (403)
T ss_dssp HHHHSC--TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCH---HHHHHHHHHHTTC-TTEEEECC
T ss_pred HHHHhc--cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCH---HHHHHHHHHhCCC-CCEEEeCC
Confidence 344555 5555666667763 3556889999999999999999998753322 34444443 3555 79999999
Q ss_pred CCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCC-CcchhhhHHHHHhhcCCCcceecCHHHHHHHHHHhh
Q psy15362 118 AAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG-ETLASRVAASQLATLGCPELIARTHKEYQDIAIRLG 196 (200)
Q Consensus 118 ~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g-~~~~~r~~~~~~~~~g~~~~ia~~~~~yv~~a~~l~ 196 (200)
+++.++..+|+.||+++..| ||.+ +||+++|+|||+.+. ....+ .+ ..|..-++..|.+++.+.+.+++
T Consensus 290 l~~~~~~~l~~~ad~vv~~S---Gg~~-~EA~a~g~PvV~~~~~~~~~e-----~v-~~g~~~lv~~d~~~l~~ai~~ll 359 (403)
T 3ot5_A 290 LDAIDFHNFLRKSYLVFTDS---GGVQ-EEAPGMGVPVLVLRDTTERPE-----GI-EAGTLKLIGTNKENLIKEALDLL 359 (403)
T ss_dssp CCHHHHHHHHHHEEEEEECC---HHHH-HHGGGTTCCEEECCSSCSCHH-----HH-HHTSEEECCSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCEEEECC---ccHH-HHHHHhCCCEEEecCCCcchh-----he-eCCcEEEcCCCHHHHHHHHHHHH
Confidence 99889999999999999775 4444 999999999998732 21111 12 22422234458888888888887
Q ss_pred cCC
Q psy15362 197 TDR 199 (200)
Q Consensus 197 ~d~ 199 (200)
+|+
T Consensus 360 ~~~ 362 (403)
T 3ot5_A 360 DNK 362 (403)
T ss_dssp HCH
T ss_pred cCH
Confidence 765
No 33
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.27 E-value=3.1e-11 Score=104.14 Aligned_cols=144 Identities=10% Similarity=0.072 Sum_probs=103.5
Q ss_pred hhhhhhcCCCCCCEEEEEeCCCC-----CCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHc-C-CC-CCcE
Q psy15362 41 ITSRQQYGLPEDAIVYCNFNQLY-----KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQAL-G-LD-QHRI 112 (200)
Q Consensus 41 ~~~R~~l~l~~~~~v~~~~~r~~-----K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~-g-l~-~~rv 112 (200)
...|+++|++++.+++++.+|.. |+.+.+++++.++.++. +.++++..+ +.+++.+++. | +. .++|
T Consensus 192 ~~~~~~lgl~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~~-----p~~~~~l~~~~~~~~~~~~v 265 (385)
T 4hwg_A 192 SDILDKLSLTPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEY-NFLIIFSTH-----PRTKKRLEDLEGFKELGDKI 265 (385)
T ss_dssp CCHHHHTTCCTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHH-CCEEEEEEC-----HHHHHHHHTSGGGGGTGGGE
T ss_pred hHHHHHcCCCcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC-CeEEEEECC-----hHHHHHHHHHHHHhcCCCCE
Confidence 46788899987777777777643 44567899999887766 777777542 2466666665 4 32 2789
Q ss_pred EEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCc-chhhhHHHHHhhcCCCcceecCHHHHHHH
Q psy15362 113 LFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGET-LASRVAASQLATLGCPELIARTHKEYQDI 191 (200)
Q Consensus 113 ~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~-~~~r~~~~~~~~~g~~~~ia~~~~~yv~~ 191 (200)
++.+.+++.++..+|+.||+++..| || ...||+++|+|||+.+... ..+. ++ .|-.-++..|.++..+.
T Consensus 266 ~l~~~lg~~~~~~l~~~adlvvt~S---Gg-v~~EA~alG~Pvv~~~~~ter~e~-----v~-~G~~~lv~~d~~~i~~a 335 (385)
T 4hwg_A 266 RFLPAFSFTDYVKLQMNAFCILSDS---GT-ITEEASILNLPALNIREAHERPEG-----MD-AGTLIMSGFKAERVLQA 335 (385)
T ss_dssp EECCCCCHHHHHHHHHHCSEEEECC---TT-HHHHHHHTTCCEEECSSSCSCTHH-----HH-HTCCEECCSSHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHhCcEEEECC---cc-HHHHHHHcCCCEEEcCCCccchhh-----hh-cCceEEcCCCHHHHHHH
Confidence 9999999889999999999999654 44 5799999999999975432 2221 21 24333444689999999
Q ss_pred HHHhhcCCC
Q psy15362 192 AIRLGTDRD 200 (200)
Q Consensus 192 a~~l~~d~e 200 (200)
+.+|++|++
T Consensus 336 i~~ll~d~~ 344 (385)
T 4hwg_A 336 VKTITEEHD 344 (385)
T ss_dssp HHHHHTTCB
T ss_pred HHHHHhChH
Confidence 999888763
No 34
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.15 E-value=2.7e-10 Score=97.24 Aligned_cols=135 Identities=14% Similarity=0.176 Sum_probs=88.1
Q ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc
Q psy15362 50 PEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL 129 (200)
Q Consensus 50 ~~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~ 129 (200)
+++.+++++.|+..+....++..+.+.+++. +.+++++++++...+.++ .+. ++|+|+|+++ +..+|+.
T Consensus 240 ~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~-~~~~~~~~g~~~~~~~l~------~~~-~~v~~~~~~~---~~~~l~~ 308 (412)
T 3otg_A 240 TARPLVYLTLGTSSGGTVEVLRAAIDGLAGL-DADVLVASGPSLDVSGLG------EVP-ANVRLESWVP---QAALLPH 308 (412)
T ss_dssp TTSCEEEEECTTTTCSCHHHHHHHHHHHHTS-SSEEEEECCSSCCCTTCC------CCC-TTEEEESCCC---HHHHGGG
T ss_pred CCCCEEEEEcCCCCcCcHHHHHHHHHHHHcC-CCEEEEEECCCCChhhhc------cCC-CcEEEeCCCC---HHHHHhc
Confidence 3456778888887544445555555555544 566776664433233333 355 8999999995 5557789
Q ss_pred ccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceec---CHHHHHHHHHHhhcCC
Q psy15362 130 ADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR 199 (200)
Q Consensus 130 aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~~l~~d~ 199 (200)
||+|+.++ |+++++|||++|+|+|+.+-..- ...-+..+...|...++.. +.+++.+.+.++++|+
T Consensus 309 ad~~v~~~---g~~t~~Ea~a~G~P~v~~p~~~~-q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~ 377 (412)
T 3otg_A 309 VDLVVHHG---GSGTTLGALGAGVPQLSFPWAGD-SFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEE 377 (412)
T ss_dssp CSEEEESC---CHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCH
T ss_pred CcEEEECC---chHHHHHHHHhCCCEEecCCchh-HHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCH
Confidence 99999653 45899999999999999643211 1112234445565555543 7888998888888775
No 35
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.14 E-value=1.1e-09 Score=82.99 Aligned_cols=132 Identities=10% Similarity=0.134 Sum_probs=85.3
Q ss_pred CCCEEEEEeCCCC-CCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc
Q psy15362 51 EDAIVYCNFNQLY-KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL 129 (200)
Q Consensus 51 ~~~~v~~~~~r~~-K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~ 129 (200)
+..++++++|+.. ......+..+.+.+++.+ .++++++++ ...+ .+. ++|+|.|++|..++.. +..
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~-~~~~~~~g~-~~~~---------~~~-~~v~~~~~~~~~~~l~-~~~ 86 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQIP-QKVLWRFDG-NKPD---------TLG-LNTRLYKWIPQNDLLG-HPK 86 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSS-SEEEEECCS-SCCT---------TCC-TTEEEESSCCHHHHHT-STT
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhCC-CeEEEEECC-cCcc---------cCC-CcEEEecCCCHHHHhc-CCC
Confidence 4467888888874 333344444444444444 677777643 2211 355 8999999999877664 389
Q ss_pred ccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceec---CHHHHHHHHHHhhcCC
Q psy15362 130 ADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR 199 (200)
Q Consensus 130 aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~~l~~d~ 199 (200)
||+++.. +|+.+++|||++|+|+|+.+-..- ...-+..+...|..-++.. +.+++.+...++++|+
T Consensus 87 ad~~I~~---~G~~t~~Ea~~~G~P~i~~p~~~~-Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 87 TRAFITH---GGANGIYEAIYHGIPMVGIPLFAD-QPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDP 155 (170)
T ss_dssp EEEEEEC---CCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCH
T ss_pred cCEEEEc---CCccHHHHHHHcCCCEEeccchhh-HHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCH
Confidence 9999963 567999999999999999754211 1112334445555444432 6778888887777664
No 36
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.06 E-value=1e-09 Score=94.57 Aligned_cols=134 Identities=19% Similarity=0.223 Sum_probs=86.8
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEE-EEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc
Q psy15362 51 EDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILW-LLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL 129 (200)
Q Consensus 51 ~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~-ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~ 129 (200)
++.++++++|+..+....++..+.+.+++.|+.+++ ++|.+ ...+.++ .+. ++|+|+|++|.. .+|+.
T Consensus 231 ~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~-~~~~~l~------~~~-~~v~~~~~~~~~---~~l~~ 299 (430)
T 2iyf_A 231 AEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRK-VTPAELG------ELP-DNVEVHDWVPQL---AILRQ 299 (430)
T ss_dssp CSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC----CGGGGC------SCC-TTEEEESSCCHH---HHHTT
T ss_pred CCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCC-CChHHhc------cCC-CCeEEEecCCHH---HHhhc
Confidence 345788899987654556666666655555677774 56653 3333332 354 899999999865 46889
Q ss_pred ccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceec---CHHHHHHHHHHhhcCC
Q psy15362 130 ADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR 199 (200)
Q Consensus 130 aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~~l~~d~ 199 (200)
||+|+.. +|+++++|||++|+|+|+.+-..- ...-+..+...|..-.+.. +.+++.+...++++|+
T Consensus 300 ad~~v~~---~G~~t~~Ea~~~G~P~i~~p~~~~-q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 368 (430)
T 2iyf_A 300 ADLFVTH---AGAGGSQEGLATATPMIAVPQAVD-QFGNADMLQGLGVARKLATEEATADLLRETALALVDDP 368 (430)
T ss_dssp CSEEEEC---CCHHHHHHHHHTTCCEEECCCSHH-HHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCH
T ss_pred cCEEEEC---CCccHHHHHHHhCCCEEECCCccc-hHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCH
Confidence 9999974 355899999999999999754211 1111223444455434432 6788888888887765
No 37
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.06 E-value=5.5e-10 Score=94.91 Aligned_cols=133 Identities=14% Similarity=0.123 Sum_probs=93.2
Q ss_pred CCCEEEEEeCCC--CCCC-HHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc
Q psy15362 51 EDAIVYCNFNQL--YKID-PSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG 127 (200)
Q Consensus 51 ~~~~v~~~~~r~--~K~~-~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~ 127 (200)
++.+++++.|+. .|.. ..+++++.+. ++.|+.++++++++ ...+.++ ++. ++|+|.|+++..+ ++
T Consensus 217 ~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~-~~~~~l~------~~~-~~v~~~~~~~~~~---ll 284 (391)
T 3tsa_A 217 SARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPP-EHRALLT------DLP-DNARIAESVPLNL---FL 284 (391)
T ss_dssp SSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCG-GGGGGCT------TCC-TTEEECCSCCGGG---TG
T ss_pred CCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECC-cchhhcc------cCC-CCEEEeccCCHHH---HH
Confidence 445677788876 3444 7888888888 88889999998853 3333332 454 8999999998654 45
Q ss_pred ccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceec-----CHHHHHHHHHHhhcCC
Q psy15362 128 QLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR-----THKEYQDIAIRLGTDR 199 (200)
Q Consensus 128 ~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~-----~~~~yv~~a~~l~~d~ 199 (200)
..||+++.. +|+.+++|||++|+|+|+.+-..- ...-+..+...|....+.. +.+++.+.+.++++|+
T Consensus 285 ~~ad~~v~~---~G~~t~~Ea~~~G~P~v~~p~~~~-q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~ 357 (391)
T 3tsa_A 285 RTCELVICA---GGSGTAFTATRLGIPQLVLPQYFD-QFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDT 357 (391)
T ss_dssp GGCSEEEEC---CCHHHHHHHHHTTCCEEECCCSTT-HHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCT
T ss_pred hhCCEEEeC---CCHHHHHHHHHhCCCEEecCCccc-HHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCH
Confidence 899999953 455799999999999999743111 1112234455566555543 6788888888888886
No 38
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=98.98 E-value=3.3e-09 Score=89.92 Aligned_cols=135 Identities=14% Similarity=0.217 Sum_probs=90.0
Q ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc
Q psy15362 50 PEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL 129 (200)
Q Consensus 50 ~~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~ 129 (200)
++..+++++.|+..+....++..+.+.+++.+ .+++++.+++...+.++ .+. ++|++.|++|.. .+|+.
T Consensus 229 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~------~~~-~~v~~~~~~~~~---~ll~~ 297 (402)
T 3ia7_A 229 PDAPVLLVSLGNQFNEHPEFFRACAQAFADTP-WHVVMAIGGFLDPAVLG------PLP-PNVEAHQWIPFH---SVLAH 297 (402)
T ss_dssp TTCCEEEEECCSCSSCCHHHHHHHHHHHTTSS-CEEEEECCTTSCGGGGC------SCC-TTEEEESCCCHH---HHHTT
T ss_pred CCCCEEEEECCCCCcchHHHHHHHHHHHhcCC-cEEEEEeCCcCChhhhC------CCC-CcEEEecCCCHH---HHHhh
Confidence 34567888889887666666666666666666 55555432333333332 244 899999999865 56789
Q ss_pred ccEEEeCCCCCCchHHHHHHHcCCCeeecCC-CcchhhhHHHHHhhcCCCcceec---CHHHHHHHHHHhhcCC
Q psy15362 130 ADVCLDTPLCNGHTTSMDVLWTGTPVVTLPG-ETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR 199 (200)
Q Consensus 130 aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g-~~~~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~~l~~d~ 199 (200)
||+++.. +|..+++|||++|+|+|+.+- .. ....-+..+...|....+.. +.+++.+.+.++++|+
T Consensus 298 ad~~v~~---~G~~t~~Ea~~~G~P~v~~p~~~~-~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~ 367 (402)
T 3ia7_A 298 ARACLTH---GTTGAVLEAFAAGVPLVLVPHFAT-EAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADS 367 (402)
T ss_dssp EEEEEEC---CCHHHHHHHHHTTCCEEECGGGCG-GGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCH
T ss_pred CCEEEEC---CCHHHHHHHHHhCCCEEEeCCCcc-cHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCH
Confidence 9999965 345789999999999998643 21 12223345556666555543 7788888888888775
No 39
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=98.95 E-value=1.5e-09 Score=92.11 Aligned_cols=119 Identities=12% Similarity=-0.035 Sum_probs=81.9
Q ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc
Q psy15362 50 PEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL 129 (200)
Q Consensus 50 ~~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~ 129 (200)
+.+.++++++|++.|.. +++.+ .|+.+|+++|++ +.+ .+ ++|+|+|++|.+++..+|+.
T Consensus 175 ~~~~~~i~yaG~l~k~~--~L~~l------~~~~~f~ivG~G-~~~----------~l--~nV~f~G~~~~~el~~~l~~ 233 (339)
T 3rhz_A 175 AGLKREIHFPGNPERFS--FVKEW------KYDIPLKVYTWQ-NVE----------LP--QNVHKINYRPDEQLLMEMSQ 233 (339)
T ss_dssp CEEEEEEEECSCTTTCG--GGGGC------CCSSCEEEEESC-CCC----------CC--TTEEEEECCCHHHHHHHHHT
T ss_pred cCCCcEEEEeCCcchhh--HHHhC------CCCCeEEEEeCC-ccc----------Cc--CCEEEeCCCCHHHHHHHHHh
Confidence 34457889999998732 22222 489999999975 433 23 48999999999999999987
Q ss_pred ccEEEeCCC--------CCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceecCHHHHHHHHHHh
Q psy15362 130 ADVCLDTPL--------CNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 195 (200)
Q Consensus 130 aDv~l~~~~--------~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~~~~~yv~~a~~l 195 (200)
+|+.+.... +..+..++|+||||+|||++....... ++...+. +++.++.+++.+....+
T Consensus 234 ~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~-----~v~~~~~-G~~~~~~~e~~~~i~~l 301 (339)
T 3rhz_A 234 GGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQE-----LIENNGL-GWIVKDVEEAIMKVKNV 301 (339)
T ss_dssp EEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTH-----HHHHHTC-EEEESSHHHHHHHHHHC
T ss_pred CCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHH-----HHHhCCe-EEEeCCHHHHHHHHHHh
Confidence 888765411 234788999999999999876543322 2222232 45556677777666554
No 40
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=98.90 E-value=1.3e-08 Score=87.08 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=90.5
Q ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc
Q psy15362 50 PEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL 129 (200)
Q Consensus 50 ~~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~ 129 (200)
++..+++++.|+..+....++..+.+.+++.| .++++..+.+...+.++ .+. ++|++.+++|.. .++..
T Consensus 245 ~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~g~~~~~~~l~------~~~-~~v~~~~~~~~~---~ll~~ 313 (415)
T 3rsc_A 245 DDLPVVLVSLGTTFNDRPGFFRDCARAFDGQP-WHVVMTLGGQVDPAALG------DLP-PNVEAHRWVPHV---KVLEQ 313 (415)
T ss_dssp SCCCEEEEECTTTSCCCHHHHHHHHHHHTTSS-CEEEEECTTTSCGGGGC------CCC-TTEEEESCCCHH---HHHHH
T ss_pred CCCCEEEEECCCCCCChHHHHHHHHHHHhcCC-cEEEEEeCCCCChHHhc------CCC-CcEEEEecCCHH---HHHhh
Confidence 34568888999887666666777666666666 67766432333333332 354 899999999865 45678
Q ss_pred ccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceec---CHHHHHHHHHHhhcCC
Q psy15362 130 ADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR 199 (200)
Q Consensus 130 aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~~l~~d~ 199 (200)
||+++.. +|..+++|||++|+|+|+.+-.. ....-+..+...|....+.. +.+++.+.+.++++|+
T Consensus 314 ad~~v~~---~G~~t~~Ea~~~G~P~v~~p~~~-~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 382 (415)
T 3rsc_A 314 ATVCVTH---GGMGTLMEALYWGRPLVVVPQSF-DVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADP 382 (415)
T ss_dssp EEEEEES---CCHHHHHHHHHTTCCEEECCCSG-GGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCH
T ss_pred CCEEEEC---CcHHHHHHHHHhCCCEEEeCCcc-hHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCH
Confidence 9999965 34578999999999999975311 11122334455566555543 7788888888888775
No 41
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.88 E-value=7.6e-09 Score=88.19 Aligned_cols=148 Identities=10% Similarity=0.021 Sum_probs=90.6
Q ss_pred hhhhcCCCCCCEEEEE-eCCCC--CCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCC
Q psy15362 43 SRQQYGLPEDAIVYCN-FNQLY--KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA 119 (200)
Q Consensus 43 ~R~~l~l~~~~~v~~~-~~r~~--K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~ 119 (200)
.+.+++++++...+.. .|+.. +..+.+.+++.++... .+.+++.+++. ...+.+++..++.+.. +.+.++++
T Consensus 170 ~~~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~-~~~~vi~~~G~-~~~~~~~~~~~~~~~~---~~v~~f~~ 244 (365)
T 3s2u_A 170 AHARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLE-IRPAIRHQAGR-QHAEITAERYRTVAVE---ADVAPFIS 244 (365)
T ss_dssp TTSSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCTT-TCCEEEEECCT-TTHHHHHHHHHHTTCC---CEEESCCS
T ss_pred hhhhcccCCCCcEEEEECCcCCccccchhhHHHHHhcccc-cceEEEEecCc-cccccccceecccccc---cccccchh
Confidence 3445667666554444 34432 2233344444433222 24455554432 3456677777776654 67789984
Q ss_pred HHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcc---hhhhHHHHHhhcCCCcceec---CHHHHHHHHH
Q psy15362 120 KEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETL---ASRVAASQLATLGCPELIAR---THKEYQDIAI 193 (200)
Q Consensus 120 ~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~---~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~ 193 (200)
++..+|+.||+++.. .|++|+.|+|++|+|+|..+-... ....-+..+...|...++.+ +.+.+.+...
T Consensus 245 --dm~~~l~~aDlvI~r---aG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~ 319 (365)
T 3s2u_A 245 --DMAAAYAWADLVICR---AGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLS 319 (365)
T ss_dssp --CHHHHHHHCSEEEEC---CCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHH
T ss_pred --hhhhhhccceEEEec---CCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHH
Confidence 677789999999964 467899999999999987542211 11222345556676556653 5678888888
Q ss_pred HhhcCCC
Q psy15362 194 RLGTDRD 200 (200)
Q Consensus 194 ~l~~d~e 200 (200)
+|++||+
T Consensus 320 ~ll~d~~ 326 (365)
T 3s2u_A 320 EVLMHPE 326 (365)
T ss_dssp HHHHCTH
T ss_pred HHHCCHH
Confidence 8888874
No 42
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.84 E-value=6.5e-09 Score=88.67 Aligned_cols=133 Identities=17% Similarity=0.119 Sum_probs=74.1
Q ss_pred CCCEEEEEeCCCC--CC------CHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHH
Q psy15362 51 EDAIVYCNFNQLY--KI------DPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEE 122 (200)
Q Consensus 51 ~~~~v~~~~~r~~--K~------~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~ 122 (200)
.+.++++++|+.. |+ ...+++.+.+.+.+. +.++++++++ ...+.++ .+. ++|+|.|++|..+
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~v~~~~~-~~~~~l~------~~~-~~v~~~~~~~~~~ 296 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-GFEVVVAVSD-KLAQTLQ------PLP-EGVLAAGQFPLSA 296 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG-TCEEEECCCC---------------CC-TTEEEESCCCHHH
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-CCEEEEEeCC-cchhhhc------cCC-CcEEEeCcCCHHH
Confidence 4567777777753 32 222333333333333 5788888753 3333333 354 8999999997554
Q ss_pred HHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceec---CHHHHHHHHHHhhcCC
Q psy15362 123 HVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR 199 (200)
Q Consensus 123 ~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~~l~~d~ 199 (200)
++..||+++.. +|+.+++|||++|+|+|+.+-..- ...-+..+...|...++.. +.+++.+.+.++++|+
T Consensus 297 ---ll~~ad~~v~~---gG~~t~~Ea~~~G~P~v~~p~~~~-q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~ 369 (398)
T 4fzr_A 297 ---IMPACDVVVHH---GGHGTTLTCLSEGVPQVSVPVIAE-VWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDS 369 (398)
T ss_dssp ---HGGGCSEEEEC---CCHHHHHHHHHTTCCEEECCCSGG-GHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCT
T ss_pred ---HHhhCCEEEec---CCHHHHHHHHHhCCCEEecCCchh-HHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCH
Confidence 56789999953 456899999999999999753211 1112234445566555542 5677888877888776
No 43
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=98.78 E-value=3.3e-08 Score=83.75 Aligned_cols=132 Identities=11% Similarity=0.084 Sum_probs=79.0
Q ss_pred CCCEEEEEeCCCCCC-----CHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHh
Q psy15362 51 EDAIVYCNFNQLYKI-----DPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVR 125 (200)
Q Consensus 51 ~~~~v~~~~~r~~K~-----~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~ 125 (200)
+..++++++|+.... ....++.+.+.+.+. +.+++++++ +...+.++ ++. ++|++ |++|..+
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~g-~~~~~~l~------~~~-~~v~~-~~~~~~~--- 275 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-DVELIVAAP-DTVAEALR------AEV-PQARV-GWTPLDV--- 275 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-TCEEEEECC-HHHHHHHH------HHC-TTSEE-ECCCHHH---
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC-CcEEEEEeC-CCCHHhhC------CCC-CceEE-cCCCHHH---
Confidence 446788889886432 112222222222232 678887753 22223332 244 88999 9998654
Q ss_pred hcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceec---CHHHHHHHHHHhhcCC
Q psy15362 126 RGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR 199 (200)
Q Consensus 126 ~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~~l~~d~ 199 (200)
+|..||+|+.. +|+++++|||++|+|+|+.+-..-. ..-+..+...|..-.+.. +.+++.+...++++|+
T Consensus 276 ~l~~~d~~v~~---~G~~t~~Ea~~~G~P~v~~p~~~dq-~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 348 (384)
T 2p6p_A 276 VAPTCDLLVHH---AGGVSTLTGLSAGVPQLLIPKGSVL-EAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKD 348 (384)
T ss_dssp HGGGCSEEEEC---SCTTHHHHHHHTTCCEEECCCSHHH-HHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCH
T ss_pred HHhhCCEEEeC---CcHHHHHHHHHhCCCEEEccCcccc-hHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCH
Confidence 56899999975 4567999999999999997642110 111223344454434432 6777877777777664
No 44
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=98.67 E-value=1.7e-07 Score=80.55 Aligned_cols=133 Identities=13% Similarity=0.190 Sum_probs=84.3
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEE-EcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc
Q psy15362 51 EDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWL-LKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL 129 (200)
Q Consensus 51 ~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~i-vG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~ 129 (200)
.+.+++++.|+.......++..+.+.+++ ++.++++ +|. +...+.++ .+. ++|++.+++|.. .+|..
T Consensus 254 ~~~~v~v~~Gs~~~~~~~~~~~~~~al~~-~~~~~~~~~g~-~~~~~~~~------~~~-~~v~~~~~~~~~---~~l~~ 321 (424)
T 2iya_A 254 GRPVLLIALGSAFTDHLDFYRTCLSAVDG-LDWHVVLSVGR-FVDPADLG------EVP-PNVEVHQWVPQL---DILTK 321 (424)
T ss_dssp SCCEEEEECCSSSCCCHHHHHHHHHHHTT-CSSEEEEECCT-TSCGGGGC------SCC-TTEEEESSCCHH---HHHTT
T ss_pred CCCEEEEEcCCCCcchHHHHHHHHHHHhc-CCcEEEEEECC-cCChHHhc------cCC-CCeEEecCCCHH---HHHhh
Confidence 34678888888764445555555544444 5667754 554 23222221 354 899999999865 36789
Q ss_pred ccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceec---CHHHHHHHHHHhhcCC
Q psy15362 130 ADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR 199 (200)
Q Consensus 130 aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~~l~~d~ 199 (200)
||+|+.. +|.++++|||++|+|+|+.+-..- ...-+..+...|..-.+.. +.+++.+...++++|+
T Consensus 322 ~d~~v~~---~G~~t~~Ea~~~G~P~i~~p~~~d-Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 390 (424)
T 2iya_A 322 ASAFITH---AGMGSTMEALSNAVPMVAVPQIAE-QTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDP 390 (424)
T ss_dssp CSEEEEC---CCHHHHHHHHHTTCCEEECCCSHH-HHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCH
T ss_pred CCEEEEC---CchhHHHHHHHcCCCEEEecCccc-hHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCH
Confidence 9999863 456899999999999999764211 1112233445565444432 6777777777777664
No 45
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.64 E-value=5.9e-08 Score=84.09 Aligned_cols=129 Identities=12% Similarity=0.035 Sum_probs=79.3
Q ss_pred CCCEEEEEeCCCC-------CCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHH
Q psy15362 51 EDAIVYCNFNQLY-------KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEH 123 (200)
Q Consensus 51 ~~~~v~~~~~r~~-------K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~ 123 (200)
+..+++++.|+.. |....+++++.+ . +.++++++++ ...+.++ .+. ++|++.+++|..+
T Consensus 266 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~----~-~~~~v~~~g~-~~~~~l~------~~~-~~v~~~~~~~~~~- 331 (441)
T 2yjn_A 266 ERRRVCLTLGISSRENSIGQVSIEELLGAVGD----V-DAEIIATFDA-QQLEGVA------NIP-DNVRTVGFVPMHA- 331 (441)
T ss_dssp SSCEEEEEC----------CCSTTTTHHHHHT----S-SSEEEECCCT-TTTSSCS------SCC-SSEEECCSCCHHH-
T ss_pred CCCEEEEECCCCcccccChHHHHHHHHHHHHc----C-CCEEEEEECC-cchhhhc------cCC-CCEEEecCCCHHH-
Confidence 3456777777643 445556666543 2 5788776643 3222221 354 8999999998654
Q ss_pred HhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceec---CHHHHHHHHHHhhcCC
Q psy15362 124 VRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGTDR 199 (200)
Q Consensus 124 ~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~~l~~d~ 199 (200)
+|..||++|.. +|+.+++|||++|+|+|+.+-..-. ..-+..+...|..-.+.. +.+++.+...++++|+
T Consensus 332 --ll~~ad~~V~~---~G~~t~~Ea~~~G~P~i~~p~~~dQ-~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 404 (441)
T 2yjn_A 332 --LLPTCAATVHH---GGPGSWHTAAIHGVPQVILPDGWDT-GVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDP 404 (441)
T ss_dssp --HGGGCSEEEEC---CCHHHHHHHHHTTCCEEECCCSHHH-HHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCH
T ss_pred --HHhhCCEEEEC---CCHHHHHHHHHhCCCEEEeCCcccH-HHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCH
Confidence 46899999963 5668999999999999997642111 111223344455444442 6677777777777664
No 46
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=98.56 E-value=7e-08 Score=82.29 Aligned_cols=93 Identities=11% Similarity=0.013 Sum_probs=63.7
Q ss_pred CCCEEEEEeCCCC---CCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc
Q psy15362 51 EDAIVYCNFNQLY---KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG 127 (200)
Q Consensus 51 ~~~~v~~~~~r~~---K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~ 127 (200)
++.++++++|+.. |..+.+.+++.. +++. +.++++++++ ...+.++ ++. ++|+|.|++|..++ |
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~-l~~~-~~~~v~~~g~-~~~~~l~------~~~-~~v~~~~~~~~~~l---l 297 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAA-AGEV-DADFVLALGD-LDISPLG------TLP-RNVRAVGWTPLHTL---L 297 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHH-HHTS-SSEEEEECTT-SCCGGGC------SCC-TTEEEESSCCHHHH---H
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHH-HHcC-CCEEEEEECC-cChhhhc------cCC-CcEEEEccCCHHHH---H
Confidence 4467888888872 344444444433 3334 6888888754 3333232 454 89999999976654 5
Q ss_pred ccccEEEeCCCCCCchHHHHHHHcCCCeeecC
Q psy15362 128 QLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP 159 (200)
Q Consensus 128 ~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~ 159 (200)
..||+|+.. +|+.+++|||++|+|+|+.+
T Consensus 298 ~~ad~~v~~---~G~~t~~Eal~~G~P~v~~p 326 (398)
T 3oti_A 298 RTCTAVVHH---GGGGTVMTAIDAGIPQLLAP 326 (398)
T ss_dssp TTCSEEEEC---CCHHHHHHHHHHTCCEEECC
T ss_pred hhCCEEEEC---CCHHHHHHHHHhCCCEEEcC
Confidence 689999953 45689999999999999853
No 47
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.45 E-value=1.4e-06 Score=74.85 Aligned_cols=127 Identities=13% Similarity=0.079 Sum_probs=76.0
Q ss_pred CEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEE-cCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccccc
Q psy15362 53 AIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLL-KFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLAD 131 (200)
Q Consensus 53 ~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~iv-G~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aD 131 (200)
.+++++.|+.. ....+++.+.+.+++.+ .+++++ |.+ ... . ..+. ++|++.+++|..++ |..||
T Consensus 239 ~~v~v~~Gs~~-~~~~~~~~~~~al~~~~-~~~v~~~g~~-~~~--~------~~~~-~~v~~~~~~~~~~~---l~~~d 303 (415)
T 1iir_A 239 PPVYLGFGSLG-APADAVRVAIDAIRAHG-RRVILSRGWA-DLV--L------PDDG-ADCFAIGEVNHQVL---FGRVA 303 (415)
T ss_dssp CCEEEECC----CCHHHHHHHHHHHHHTT-CCEEECTTCT-TCC--C------SSCG-GGEEECSSCCHHHH---GGGSS
T ss_pred CeEEEeCCCCC-CcHHHHHHHHHHHHHCC-CeEEEEeCCC-ccc--c------cCCC-CCEEEeCcCChHHH---HhhCC
Confidence 56788888764 33455555555445554 455554 542 211 1 2454 89999999997654 58999
Q ss_pred EEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCccee---cCHHHHHHHHHHhhcCC
Q psy15362 132 VCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA---RTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 132 v~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia---~~~~~yv~~a~~l~~d~ 199 (200)
+|+.. +|.++++|||++|+|+|+.+-..- ...-+..+...|..-.+. -+.+++.+...++ +|+
T Consensus 304 ~~v~~---~G~~t~~Ea~~~G~P~i~~p~~~d-Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~ 369 (415)
T 1iir_A 304 AVIHH---GGAGTTHVAARAGAPQILLPQMAD-QPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LTP 369 (415)
T ss_dssp EEEEC---CCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSH
T ss_pred EEEeC---CChhHHHHHHHcCCCEEECCCCCc-cHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCH
Confidence 99964 456899999999999999753211 111122334445443443 2667777766666 553
No 48
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.32 E-value=5.1e-06 Score=71.23 Aligned_cols=128 Identities=12% Similarity=0.022 Sum_probs=76.4
Q ss_pred CEEEEEeCCCCC-CCHHHHHHHHHHHHHCCCcEEEEE-cCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccc
Q psy15362 53 AIVYCNFNQLYK-IDPSTLQMWVNVLKAVPNSILWLL-KFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLA 130 (200)
Q Consensus 53 ~~v~~~~~r~~K-~~~~~l~a~~~i~~~~p~~~l~iv-G~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~a 130 (200)
.+++++.|+... ....+++.+.+.+++.+ .+++++ |.+ .. + . ..+. +++++.+++|..+ +|..|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~-~~~v~~~g~~-~~-~-~------~~~~-~~v~~~~~~~~~~---ll~~~ 303 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQG-RRVILSRGWT-EL-V-L------PDDR-DDCFAIDEVNFQA---LFRRV 303 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHTT-CCEEEECTTT-TC-C-C------SCCC-TTEEEESSCCHHH---HGGGS
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHCC-CeEEEEeCCc-cc-c-c------cCCC-CCEEEeccCChHH---HhccC
Confidence 567788887642 22334444444444443 556554 542 21 1 1 2454 8899999998655 46899
Q ss_pred cEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCccee---cCHHHHHHHHHHhhcCC
Q psy15362 131 DVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA---RTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 131 Dv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia---~~~~~yv~~a~~l~~d~ 199 (200)
|+|+. .+|..|++||+++|+|+|+.+-..- ...-+..+...|..-.+. .+.+++.+...++ +|+
T Consensus 304 d~~v~---~~G~~t~~Ea~~~G~P~i~~p~~~d-Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~ 370 (416)
T 1rrv_A 304 AAVIH---HGSAGTEHVATRAGVPQLVIPRNTD-QPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAP 370 (416)
T ss_dssp SEEEE---CCCHHHHHHHHHHTCCEEECCCSBT-HHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSH
T ss_pred CEEEe---cCChhHHHHHHHcCCCEEEccCCCC-cHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCH
Confidence 99997 3566799999999999999753211 111122333445443333 2566776666666 553
No 49
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=98.17 E-value=1.7e-05 Score=68.00 Aligned_cols=129 Identities=16% Similarity=0.098 Sum_probs=75.7
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccc
Q psy15362 51 EDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLA 130 (200)
Q Consensus 51 ~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~a 130 (200)
.+.+++++.|+... ...+++.+.+.+++. +.++++.++. ...+ ..+.. ++|++.+++|..++ +..|
T Consensus 220 ~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~-~~~vv~~~g~-~~~~-------~~~~~-~~v~~~~~~~~~~l---l~~~ 285 (404)
T 3h4t_A 220 GSPPVYVGFGSGPA-PAEAARVAIEAVRAQ-GRRVVLSSGW-AGLG-------RIDEG-DDCLVVGEVNHQVL---FGRV 285 (404)
T ss_dssp SSCCEEECCTTSCC-CTTHHHHHHHHHHHT-TCCEEEECTT-TTCC-------CSSCC-TTEEEESSCCHHHH---GGGS
T ss_pred CCCeEEEECCCCCC-cHHHHHHHHHHHHhC-CCEEEEEeCC-cccc-------cccCC-CCEEEecCCCHHHH---HhhC
Confidence 34577888887654 334445444444444 4666665432 1111 12344 89999999987654 5789
Q ss_pred cEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCccee---cCHHHHHHHHHHhhc
Q psy15362 131 DVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA---RTHKEYQDIAIRLGT 197 (200)
Q Consensus 131 Dv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia---~~~~~yv~~a~~l~~ 197 (200)
|+++.. +|..++.||+++|+|+|..+-..- ...-+..+...|....+. .+.+.+.+...++++
T Consensus 286 d~~v~~---gG~~t~~Eal~~GvP~v~~p~~~d-Q~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 351 (404)
T 3h4t_A 286 AAVVHH---GGAGTTTAVTRAGAPQVVVPQKAD-QPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT 351 (404)
T ss_dssp SEEEEC---CCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS
T ss_pred cEEEEC---CcHHHHHHHHHcCCCEEEcCCccc-HHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC
Confidence 999964 355789999999999998753111 111122233445443332 155666655555543
No 50
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=98.06 E-value=8.9e-06 Score=68.75 Aligned_cols=94 Identities=13% Similarity=0.035 Sum_probs=60.3
Q ss_pred CCCEEEEEeCCCC--CCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc
Q psy15362 51 EDAIVYCNFNQLY--KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ 128 (200)
Q Consensus 51 ~~~~v~~~~~r~~--K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~ 128 (200)
+..+++++.|+.. +.....+..+.+.+.+.+ .++++...+.. .+. ...+. +++.+.+++|..++ |.
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~-~~~v~~~~~~~-~~~------~~~~~-~~v~~~~~~p~~~l---L~ 303 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVADVD-AEFVLTLGGGD-LAL------LGELP-ANVRVVEWIPLGAL---LE 303 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGGSS-SEEEEECCTTC-CCC------CCCCC-TTEEEECCCCHHHH---HT
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhccC-ceEEEEecCcc-ccc------cccCC-CCEEEEeecCHHHH---hh
Confidence 3457888888753 222233444444445444 55555443221 111 12354 89999999997665 56
Q ss_pred cccEEEeCCCCCCchHHHHHHHcCCCeeecC
Q psy15362 129 LADVCLDTPLCNGHTTSMDVLWTGTPVVTLP 159 (200)
Q Consensus 129 ~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~ 159 (200)
.+|+|+.. +|.++++|||++|+|+|+.+
T Consensus 304 ~~~~~v~h---~G~~s~~Eal~~GvP~v~~P 331 (400)
T 4amg_A 304 TCDAIIHH---GGSGTLLTALAAGVPQCVIP 331 (400)
T ss_dssp TCSEEEEC---CCHHHHHHHHHHTCCEEECC
T ss_pred hhhheecc---CCccHHHHHHHhCCCEEEec
Confidence 89999853 56689999999999999864
No 51
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=97.92 E-value=0.00035 Score=61.16 Aligned_cols=138 Identities=14% Similarity=0.126 Sum_probs=79.3
Q ss_pred CCCEEEEEeCCCC-CCCHHHHHHHHHHHHHCCCcEEEEEcCCc--ccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc
Q psy15362 51 EDAIVYCNFNQLY-KIDPSTLQMWVNVLKAVPNSILWLLKFPA--VGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG 127 (200)
Q Consensus 51 ~~~~v~~~~~r~~-K~~~~~l~a~~~i~~~~p~~~l~ivG~~~--~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~ 127 (200)
+..++|++.|... ......++.+.+.+++.+ .+++.+-+.+ ...+.+.+.... . +++.+.+|+|..+++. .
T Consensus 275 ~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~l~~~~~~~~~~---~-~~~~v~~w~pq~~vL~-h 348 (463)
T 2acv_A 275 DKSVVFLCFGSMGVSFGPSQIREIALGLKHSG-VRFLWSNSAEKKVFPEGFLEWMEL---E-GKGMICGWAPQVEVLA-H 348 (463)
T ss_dssp TTCEEEEECCSSCCCCCHHHHHHHHHHHHHHT-CEEEEECCCCGGGSCTTHHHHHHH---H-CSEEEESSCCHHHHHH-S
T ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHhCC-CcEEEEECCCcccCChhHHHhhcc---C-CCEEEEccCCHHHHhC-C
Confidence 4568899998876 444455555555444433 5555443222 011222222211 2 6788899999765431 2
Q ss_pred ccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCccee---------cCHHHHHHHHHHhhc
Q psy15362 128 QLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIA---------RTHKEYQDIAIRLGT 197 (200)
Q Consensus 128 ~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia---------~~~~~yv~~a~~l~~ 197 (200)
..+|+||.- +|.++++||+++|+|+|+.+-..-....+..++...|..-.+. -+.++..+...++.+
T Consensus 349 ~~~~~fvth---~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~ 424 (463)
T 2acv_A 349 KAIGGFVSH---CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMD 424 (463)
T ss_dssp TTEEEEEEC---CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTC
T ss_pred CccCeEEec---CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHh
Confidence 379999963 5679999999999999997642111111222235556654441 245666666666654
No 52
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=97.91 E-value=0.00017 Score=63.28 Aligned_cols=100 Identities=15% Similarity=0.260 Sum_probs=64.3
Q ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHH-HHHHHcCCCCCcEEEeccCCHHHHHhhcc
Q psy15362 50 PEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQ-ATAQALGLDQHRILFSNVAAKEEHVRRGQ 128 (200)
Q Consensus 50 ~~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~-~~~~~~gl~~~rv~f~g~~~~~~~~~~~~ 128 (200)
++..++|++.|.........++.+...+++.+--.++.+|. ...+.+. .+..+ .. +|+.+.+|+|..++ +.
T Consensus 271 ~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~--~~~~~lp~~~~~~--~~-~~~~vv~w~Pq~~v---L~ 342 (454)
T 3hbf_A 271 ENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRG--DPKEKLPKGFLER--TK-TKGKIVAWAPQVEI---LK 342 (454)
T ss_dssp CTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCS--CHHHHSCTTHHHH--TT-TTEEEESSCCHHHH---HH
T ss_pred CCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC--cchhcCCHhHHhh--cC-CceEEEeeCCHHHH---Hh
Confidence 34578999999876555555566665555544334444543 2222221 11122 33 78999999997654 45
Q ss_pred ccc--EEEeCCCCCCchHHHHHHHcCCCeeecCC
Q psy15362 129 LAD--VCLDTPLCNGHTTSMDVLWTGTPVVTLPG 160 (200)
Q Consensus 129 ~aD--v~l~~~~~~~g~~~lEAma~G~PVV~~~g 160 (200)
.+| +||.. +|.++++||+++|+|+|+.+-
T Consensus 343 h~~v~~fvtH---~G~~S~~Eal~~GvP~i~~P~ 373 (454)
T 3hbf_A 343 HSSVGVFLTH---SGWNSVLECIVGGVPMISRPF 373 (454)
T ss_dssp STTEEEEEEC---CCHHHHHHHHHHTCCEEECCC
T ss_pred hcCcCeEEec---CCcchHHHHHHcCCCEecCcc
Confidence 777 77753 566899999999999999753
No 53
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=97.89 E-value=7.4e-05 Score=65.39 Aligned_cols=136 Identities=13% Similarity=0.129 Sum_probs=75.5
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHH-HHHHHcCCCCCcEEEeccCCHHHHHhhcc-
Q psy15362 51 EDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQ-ATAQALGLDQHRILFSNVAAKEEHVRRGQ- 128 (200)
Q Consensus 51 ~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~-~~~~~~gl~~~rv~f~g~~~~~~~~~~~~- 128 (200)
+..+++++.|.........++.+.+.+++.+--.++.+|.. . .+.+. .+... +. +++.+.+|+|..++ |.
T Consensus 270 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-~-~~~l~~~~~~~--~~-~~~~v~~w~pq~~v---L~h 341 (456)
T 2c1x_A 270 PTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK-A-RVHLPEGFLEK--TR-GYGMVVPWAPQAEV---LAH 341 (456)
T ss_dssp TTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG-G-GGGSCTTHHHH--HT-TTEEEESCCCHHHH---HTS
T ss_pred CcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc-c-hhhCCHHHHhh--cC-CceEEecCCCHHHH---hcC
Confidence 45688889888754444455554444444332334445431 1 11111 11111 23 78999999997554 44
Q ss_pred -cccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHHhhc-CCCccee---cCHHHHHHHHHHhhcC
Q psy15362 129 -LADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATL-GCPELIA---RTHKEYQDIAIRLGTD 198 (200)
Q Consensus 129 -~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~-g~~~~ia---~~~~~yv~~a~~l~~d 198 (200)
.+|+|+.- +|.++++||+++|+|+|+.+-..- ...-+..+... |..-.+. -+.++..+...++.+|
T Consensus 342 ~~~~~fvth---~G~~S~~Eal~~GvP~i~~P~~~d-Q~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~ 412 (456)
T 2c1x_A 342 EAVGAFVTH---CGWNSLWESVAGGVPLICRPFFGD-QRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQ 412 (456)
T ss_dssp TTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHS
T ss_pred CcCCEEEec---CCcchHHHHHHhCceEEecCChhh-HHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCC
Confidence 78999963 567899999999999999763211 11122233333 5543332 1345555555444444
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.88 E-value=7.6e-05 Score=62.17 Aligned_cols=116 Identities=11% Similarity=0.021 Sum_probs=74.2
Q ss_pred hhhhhhhcCCCC-CCEEEEEeCC---CCCCCH--HHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcC--CCCCc
Q psy15362 40 VITSRQQYGLPE-DAIVYCNFNQ---LYKIDP--STLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALG--LDQHR 111 (200)
Q Consensus 40 ~~~~R~~l~l~~-~~~v~~~~~r---~~K~~~--~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~g--l~~~r 111 (200)
....++.++++. +.++....+. ..|..+ .+.+++..+.++ +.+++++|. +.+.+..+++.+..+ .....
T Consensus 167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~-~~e~~~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGS-AKDHEAGNEILAALNTEQQAWC 243 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCC-GGGHHHHHHHHTTSCHHHHTTE
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeC-hhhHHHHHHHHHhhhhccccce
Confidence 345667788864 3455455543 346654 666666666554 788999885 344444444443322 11023
Q ss_pred EEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCc
Q psy15362 112 ILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGET 162 (200)
Q Consensus 112 v~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~ 162 (200)
+.+.|..+..++..+++.||++|... +|..-+ |.|+|+|+|+.-|.+
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D---sg~~Hl-Aaa~g~P~v~lfg~t 290 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND---SGLMHV-AAALNRPLVALYGPS 290 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES---SHHHHH-HHHTTCCEEEEESSS
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC---CHHHHH-HHHcCCCEEEEECCC
Confidence 46788888899999999999999642 233333 999999999876544
No 55
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=97.82 E-value=0.00071 Score=59.37 Aligned_cols=138 Identities=12% Similarity=0.144 Sum_probs=75.8
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEE-EcCCc-cc-HHHH-HHHHHHcCCCCCcEEEeccCCHHHHHhh
Q psy15362 51 EDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWL-LKFPA-VG-EANI-QATAQALGLDQHRILFSNVAAKEEHVRR 126 (200)
Q Consensus 51 ~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~i-vG~~~-~~-~~~l-~~~~~~~gl~~~rv~f~g~~~~~~~~~~ 126 (200)
+..++|++.|.........+..+..-+++.+ .+++. +|... .. ...+ +.+.+. +. +++.+.+|+|..++
T Consensus 294 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~~~~~l~~~~~~~--~~-~~~~v~~~~pq~~~--- 366 (482)
T 2pq6_A 294 PGSVVYVNFGSTTVMTPEQLLEFAWGLANCK-KSFLWIIRPDLVIGGSVIFSSEFTNE--IA-DRGLIASWCPQDKV--- 366 (482)
T ss_dssp TTCEEEEECCSSSCCCHHHHHHHHHHHHHTT-CEEEEECCGGGSTTTGGGSCHHHHHH--HT-TTEEEESCCCHHHH---
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhcC-CcEEEEEcCCccccccccCcHhHHHh--cC-CCEEEEeecCHHHH---
Confidence 4568899998865333333444455455554 55544 44210 00 0001 122222 33 78999999997654
Q ss_pred ccc--ccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHHHHH-hhcCCCccee--cCHHHHHHHHHHhhcCC
Q psy15362 127 GQL--ADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQL-ATLGCPELIA--RTHKEYQDIAIRLGTDR 199 (200)
Q Consensus 127 ~~~--aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~~~~-~~~g~~~~ia--~~~~~yv~~a~~l~~d~ 199 (200)
|+. +|+||. .+|.++++||+++|+|+|+.+-..-. ..-+..+ +..|..-.+. -+.++..+...++++|+
T Consensus 367 L~h~~~~~~vt---h~G~~s~~Eal~~GvP~i~~P~~~dQ-~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~~ 440 (482)
T 2pq6_A 367 LNHPSIGGFLT---HCGWNSTTESICAGVPMLCWPFFADQ-PTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAGD 440 (482)
T ss_dssp HTSTTEEEEEE---CCCHHHHHHHHHHTCCEEECCCSTTH-HHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTSH
T ss_pred hcCCCCCEEEe---cCCcchHHHHHHcCCCEEecCcccch-HHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcCC
Confidence 444 556885 35678999999999999997542111 1112223 3456544433 24555555555555443
No 56
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=97.57 E-value=0.00035 Score=57.56 Aligned_cols=66 Identities=8% Similarity=-0.063 Sum_probs=50.0
Q ss_pred EEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecC
Q psy15362 84 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP 159 (200)
Q Consensus 84 ~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~ 159 (200)
..++.|.+.+..+++++.+++ . .++.+.++++ ++..+|+.||+.+.+ +|+|+.|++++|+|.|..+
T Consensus 186 i~vv~G~~~~~~~~l~~~~~~---~-~~v~v~~~~~--~m~~~m~~aDlvI~~----gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 186 ISIATSSSNPNLKKLQKFAKL---H-NNIRLFIDHE--NIAKLMNESNKLIIS----ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp EEEEECTTCTTHHHHHHHHHT---C-SSEEEEESCS--CHHHHHHTEEEEEEE----SSHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCchHHHHHHHHHhh---C-CCEEEEeCHH--HHHHHHHHCCEEEEC----CcHHHHHHHHcCCCEEEEe
Confidence 445556543456777776654 2 4799999984 677889999999973 4689999999999999854
No 57
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.42 E-value=0.0016 Score=54.86 Aligned_cols=114 Identities=11% Similarity=0.040 Sum_probs=75.3
Q ss_pred hhcCCCCC-CEEEEEeCC--CCCCC--HHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCC
Q psy15362 45 QQYGLPED-AIVYCNFNQ--LYKID--PSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA 119 (200)
Q Consensus 45 ~~l~l~~~-~~v~~~~~r--~~K~~--~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~ 119 (200)
+++|++.+ .++....+. ..|.- +.+.+....+.++ +.+++++|.+ .+++..++..+..+- ..+.+.|..+
T Consensus 177 ~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~-~e~~~~~~i~~~~~~--~~~~l~g~~s 251 (349)
T 3tov_A 177 SSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGP-MDLEMVQPVVEQMET--KPIVATGKFQ 251 (349)
T ss_dssp HHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCT-TTHHHHHHHHHTCSS--CCEECTTCCC
T ss_pred HHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCc-chHHHHHHHHHhccc--ccEEeeCCCC
Confidence 45677654 344444443 35654 3566666666665 6778888853 455556666665442 4467789888
Q ss_pred HHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhh
Q psy15362 120 KEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRV 167 (200)
Q Consensus 120 ~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~ 167 (200)
-.++..+++.||++|.. .+|..-+ |.|+|+|+|+.-|.+-..++
T Consensus 252 l~e~~ali~~a~~~i~~---DsG~~Hl-Aaa~g~P~v~lfg~t~p~~~ 295 (349)
T 3tov_A 252 LGPLAAAMNRCNLLITN---DSGPMHV-GISQGVPIVALYGPSNPFFY 295 (349)
T ss_dssp HHHHHHHHHTCSEEEEE---SSHHHHH-HHTTTCCEEEECSSCCHHHH
T ss_pred HHHHHHHHHhCCEEEEC---CCCHHHH-HHhcCCCEEEEECCCCcccc
Confidence 88999999999999854 2344444 89999999998776543433
No 58
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=97.42 E-value=0.0027 Score=59.01 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=82.4
Q ss_pred hhhhcCCC--CCCEEEEEeCCC--CCCCHH-HHHHHHHHHH--HCC-----CcEEEEEcCCcccHHH---HHHHHHHc--
Q psy15362 43 SRQQYGLP--EDAIVYCNFNQL--YKIDPS-TLQMWVNVLK--AVP-----NSILWLLKFPAVGEAN---IQATAQAL-- 105 (200)
Q Consensus 43 ~R~~l~l~--~~~~v~~~~~r~--~K~~~~-~l~a~~~i~~--~~p-----~~~l~ivG~~~~~~~~---l~~~~~~~-- 105 (200)
+++++|++ ++.++++.+.|+ +|+.+. ++..+.++.+ +.| ..++++.|.+.+.... +-+++.+.
T Consensus 504 l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~ 583 (796)
T 2c4m_A 504 ILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIAD 583 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHH
Confidence 35666764 577888999987 699887 6777776653 343 3788888865443322 22222222
Q ss_pred ------CCCCC--cEEEeccCCHHHHHhhcccccEEEeCCC--CC-CchHHHHHHHcCCCeeec-CCC
Q psy15362 106 ------GLDQH--RILFSNVAAKEEHVRRGQLADVCLDTPL--CN-GHTTSMDVLWTGTPVVTL-PGE 161 (200)
Q Consensus 106 ------gl~~~--rv~f~g~~~~~~~~~~~~~aDv~l~~~~--~~-~g~~~lEAma~G~PVV~~-~g~ 161 (200)
.+. + +|.|+..-+..--..++.+||+++.+|. +| +|++-+=||.-|++.|++ +|.
T Consensus 584 ~in~dp~~~-~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGa 650 (796)
T 2c4m_A 584 LVNNDPEVS-PLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGA 650 (796)
T ss_dssp HHHTCTTTT-TTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTH
T ss_pred HhccccccC-CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCe
Confidence 354 7 8999887665444557899999999986 66 699999999999999964 554
No 59
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=97.42 E-value=0.0027 Score=55.81 Aligned_cols=101 Identities=14% Similarity=0.227 Sum_probs=60.2
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCcc-------------c-HHHHH-HHHHHcCCCCCc-EEE
Q psy15362 51 EDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAV-------------G-EANIQ-ATAQALGLDQHR-ILF 114 (200)
Q Consensus 51 ~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~-------------~-~~~l~-~~~~~~gl~~~r-v~f 114 (200)
+..++|+++|.........++.+.+-+++.+.-.++.++.... . .+.+- ...++ .. ++ +++
T Consensus 267 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~-~~g~~v 343 (480)
T 2vch_A 267 LGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLER--TK-KRGFVI 343 (480)
T ss_dssp TTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHH--TT-TTEEEE
T ss_pred CCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHH--hC-CCeEEE
Confidence 4578999999875444555566666666655444445553210 0 00111 11111 22 33 345
Q ss_pred eccCCHHHHHhhccccc--EEEeCCCCCCchHHHHHHHcCCCeeecCC
Q psy15362 115 SNVAAKEEHVRRGQLAD--VCLDTPLCNGHTTSMDVLWTGTPVVTLPG 160 (200)
Q Consensus 115 ~g~~~~~~~~~~~~~aD--v~l~~~~~~~g~~~lEAma~G~PVV~~~g 160 (200)
.+|+|..++ |+.+| +||. .+|.++++||+++|+|+|+.+-
T Consensus 344 ~~w~Pq~~v---L~h~~v~~fvt---HgG~~S~~Eal~~GvP~i~~P~ 385 (480)
T 2vch_A 344 PFWAPQAQV---LAHPSTGGFLT---HCGWNSTLESVVSGIPLIAWPL 385 (480)
T ss_dssp ESCCCHHHH---HHSTTEEEEEE---CCCHHHHHHHHHHTCCEEECCC
T ss_pred eCccCHHHH---hCCCCcCeEEe---cccchhHHHHHHcCCCEEeccc
Confidence 569997654 45777 6775 3566899999999999999763
No 60
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=97.24 E-value=0.0046 Score=57.50 Aligned_cols=119 Identities=16% Similarity=0.142 Sum_probs=82.2
Q ss_pred hhhhcCCC--CCCEEEEEeCCC--CCCCHH-HHHHHHHHHH--HCC-----CcEEEEEcCCcccHHH---HHHHHHHc--
Q psy15362 43 SRQQYGLP--EDAIVYCNFNQL--YKIDPS-TLQMWVNVLK--AVP-----NSILWLLKFPAVGEAN---IQATAQAL-- 105 (200)
Q Consensus 43 ~R~~l~l~--~~~~v~~~~~r~--~K~~~~-~l~a~~~i~~--~~p-----~~~l~ivG~~~~~~~~---l~~~~~~~-- 105 (200)
+++++|++ ++.++++.+.|. +|+.+. ++..+.++.+ ..| ..++++.|.+.+.... +-+++.+.
T Consensus 514 l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~ 593 (796)
T 1l5w_A 514 VKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAD 593 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHHHHHHH
Confidence 35667765 567888999987 599887 6777766543 233 3788888865443322 22222222
Q ss_pred ------CCCCC--cEEEeccCCHHHHHhhcccccEEEeCCC--CC-CchHHHHHHHcCCCeeec-CCCc
Q psy15362 106 ------GLDQH--RILFSNVAAKEEHVRRGQLADVCLDTPL--CN-GHTTSMDVLWTGTPVVTL-PGET 162 (200)
Q Consensus 106 ------gl~~~--rv~f~g~~~~~~~~~~~~~aDv~l~~~~--~~-~g~~~lEAma~G~PVV~~-~g~~ 162 (200)
.+. + +|.|+..-+..--..++.+||+++.+|. +| +|++-+=||.-|++.|++ +|..
T Consensus 594 ~in~Dp~~~-~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGan 661 (796)
T 1l5w_A 594 VINNDPLVG-DKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGAN 661 (796)
T ss_dssp HHHTCTTTG-GGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTH
T ss_pred HhccccccC-CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCee
Confidence 354 7 8999887665444557899999999986 66 699999999999999964 5653
No 61
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=97.11 E-value=0.0012 Score=52.65 Aligned_cols=46 Identities=11% Similarity=0.236 Sum_probs=37.2
Q ss_pred cEEEeccCCHHHHHhhcc-cccEEEeCCCCCCchHHHHHHHcCCCeeecCCC
Q psy15362 111 RILFSNVAAKEEHVRRGQ-LADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGE 161 (200)
Q Consensus 111 rv~f~g~~~~~~~~~~~~-~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~ 161 (200)
++...+++ +++..+|. .||+++.- +|..|++|++++|+|.|..+..
T Consensus 115 ~v~v~~f~--~~m~~~l~~~AdlvIsh---aGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 115 KVIGFDFS--TKMQSIIRDYSDLVISH---AGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp EEEECCSS--SSHHHHHHHHCSCEEES---SCHHHHHHHHHTTCCCCEECCS
T ss_pred eEEEeecc--chHHHHHHhcCCEEEEC---CcHHHHHHHHHhCCCEEEEcCc
Confidence 56666777 46777889 99999963 5678999999999999987654
No 62
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=96.96 E-value=0.0064 Score=56.72 Aligned_cols=119 Identities=15% Similarity=0.166 Sum_probs=81.6
Q ss_pred hhhhcCCC--CCCEEEEEeCCC--CCCCHHH-HHHHHHHH--HHCC-----CcEEEEEcCCcccHHH-------HHHHHH
Q psy15362 43 SRQQYGLP--EDAIVYCNFNQL--YKIDPST-LQMWVNVL--KAVP-----NSILWLLKFPAVGEAN-------IQATAQ 103 (200)
Q Consensus 43 ~R~~l~l~--~~~~v~~~~~r~--~K~~~~~-l~a~~~i~--~~~p-----~~~l~ivG~~~~~~~~-------l~~~~~ 103 (200)
+++++|++ ++.++++.+.|+ +|+.+.. +..+.++. +..| ..++++.|.+.+.... +...++
T Consensus 538 l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~ 617 (824)
T 2gj4_A 538 LEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGD 617 (824)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHH
Confidence 44556765 577888999987 5998775 66666654 3455 4688888865443222 333333
Q ss_pred Hc----CCCCC--cEEEeccCCHHHHHhhcccccEEEeCCC--CC-CchHHHHHHHcCCCeeec-CCCc
Q psy15362 104 AL----GLDQH--RILFSNVAAKEEHVRRGQLADVCLDTPL--CN-GHTTSMDVLWTGTPVVTL-PGET 162 (200)
Q Consensus 104 ~~----gl~~~--rv~f~g~~~~~~~~~~~~~aDv~l~~~~--~~-~g~~~lEAma~G~PVV~~-~g~~ 162 (200)
.. .+. + +|.|+..-+..--..++.+||+++.+|. +| +|++-+=||.-|++.|++ +|..
T Consensus 618 ~in~Dp~v~-~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGan 685 (824)
T 2gj4_A 618 VVNHDPVVG-DRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGAN 685 (824)
T ss_dssp HHTTCTTTG-GGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTH
T ss_pred HhccCcccC-CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCcc
Confidence 22 233 7 8999887665444557899999999986 65 699999999999988864 5643
No 63
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.55 E-value=0.011 Score=48.68 Aligned_cols=137 Identities=9% Similarity=-0.067 Sum_probs=76.1
Q ss_pred CCCCEEEEEeCC--CCCCCH--HHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHh
Q psy15362 50 PEDAIVYCNFNQ--LYKIDP--STLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVR 125 (200)
Q Consensus 50 ~~~~~v~~~~~r--~~K~~~--~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~ 125 (200)
+.+.++....+. ..|.-+ .+.+....+.+ .+.++++.+++..+.+..++..+. . ..+.+.|..+-.++..
T Consensus 176 ~~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~--~~~~vvl~~g~~~e~~~~~~i~~~--~--~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 176 DAGEYAVFLHATTRDDKHWPEEHWRELIGLLAD--SGIRIKLPWGAPHEEERAKRLAEG--F--AYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTTSEEEEECCCSSGGGSCCHHHHHHHHHHTTT--TCCEEEECCSSHHHHHHHHHHHTT--C--TTEEECCCCCHHHHHH
T ss_pred cCCCEEEEEeCCCCccccCCHHHHHHHHHHHHH--CCCcEEEecCCHHHHHHHHHHHhh--C--CcccccCCCCHHHHHH
Confidence 334455444442 346543 44444444432 367888863222233334444432 2 2367889888899999
Q ss_pred hcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcchhhhHH-----HHHhhcCCCcce-ecCHHHHHHHHHHhhcC
Q psy15362 126 RGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAA-----SQLATLGCPELI-ARTHKEYQDIAIRLGTD 198 (200)
Q Consensus 126 ~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~~~r~~~-----~~~~~~g~~~~i-a~~~~~yv~~a~~l~~d 198 (200)
+++.||+++.. .+|..-+ |.|+|+|+|+.-|.+-..+++- .++. +-...+ .-+.++-.+.+.+++++
T Consensus 250 li~~a~l~I~~---DSG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~--~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 250 VLAGAKFVVSV---DTGLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCR--APGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp HHHTCSEEEEE---SSHHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEE--CGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred HHHhCCEEEec---CCcHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEec--CCcccccCCCHHHHHHHHHHHHHH
Confidence 99999999854 1244445 7779999999766544333321 0000 101111 23667777777777654
No 64
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=91.82 E-value=2.6 Score=39.56 Aligned_cols=111 Identities=13% Similarity=0.191 Sum_probs=72.3
Q ss_pred CCCEEEEEeCCC--CCCCHH-HHHH---HHHHHHH-------------CCCcEEEEEcCCcccH---HHHHHHHHHc---
Q psy15362 51 EDAIVYCNFNQL--YKIDPS-TLQM---WVNVLKA-------------VPNSILWLLKFPAVGE---ANIQATAQAL--- 105 (200)
Q Consensus 51 ~~~~v~~~~~r~--~K~~~~-~l~a---~~~i~~~-------------~p~~~l~ivG~~~~~~---~~l~~~~~~~--- 105 (200)
++.+..+.+-|. +|.+.. ++.. +.+|++. ..-..+++.|...|.. ..+-+++.+.
T Consensus 598 p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~ 677 (879)
T 1ygp_A 598 DDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADI 677 (879)
T ss_dssp GGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHH
Confidence 567777888886 588655 3444 4445544 2236677766533332 2233333322
Q ss_pred -----CCCCC--cEEEeccCCHHHHHhhcccccEEEeCC--CCC-CchHHHHHHHcCCCeeec-CCCc
Q psy15362 106 -----GLDQH--RILFSNVAAKEEHVRRGQLADVCLDTP--LCN-GHTTSMDVLWTGTPVVTL-PGET 162 (200)
Q Consensus 106 -----gl~~~--rv~f~g~~~~~~~~~~~~~aDv~l~~~--~~~-~g~~~lEAma~G~PVV~~-~g~~ 162 (200)
.+. + +|+|+..-.-.--..++.+|||....| +.| +|++-+=+|.-|.+.+++ +|..
T Consensus 678 iN~Dp~v~-~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGan 744 (879)
T 1ygp_A 678 VNNDESIE-HLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGAN 744 (879)
T ss_dssp HTTCGGGT-TSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHH
T ss_pred hccChhhC-CceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchh
Confidence 244 6 899999877554455689999998776 444 699999999999999975 6654
No 65
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=89.71 E-value=1.5 Score=36.00 Aligned_cols=75 Identities=12% Similarity=0.076 Sum_probs=54.1
Q ss_pred HHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCC
Q psy15362 75 NVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGT 153 (200)
Q Consensus 75 ~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~ 153 (200)
..+++.|++.++-+.+ ...++.+++++++|+. ++ +-+.++++. -...|+++.+.|... .-.+++|+.+|+
T Consensus 41 ~~~~~~~~~~lvav~d--~~~~~a~~~a~~~g~~--~~----y~d~~ell~-~~~iDaV~I~tP~~~H~~~~~~al~aGk 111 (350)
T 4had_A 41 PAIQDAENCVVTAIAS--RDLTRAREMADRFSVP--HA----FGSYEEMLA-SDVIDAVYIPLPTSQHIEWSIKAADAGK 111 (350)
T ss_dssp HHHHHCSSEEEEEEEC--SSHHHHHHHHHHHTCS--EE----ESSHHHHHH-CSSCSEEEECSCGGGHHHHHHHHHHTTC
T ss_pred HHHHhCCCeEEEEEEC--CCHHHHHHHHHHcCCC--ee----eCCHHHHhc-CCCCCEEEEeCCCchhHHHHHHHHhcCC
Confidence 3456789999998876 4567888999999984 22 334566653 235899977766443 456899999999
Q ss_pred Ceeec
Q psy15362 154 PVVTL 158 (200)
Q Consensus 154 PVV~~ 158 (200)
+|++-
T Consensus 112 hVl~E 116 (350)
T 4had_A 112 HVVCE 116 (350)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99983
No 66
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=89.33 E-value=0.36 Score=40.16 Aligned_cols=91 Identities=16% Similarity=0.052 Sum_probs=60.0
Q ss_pred eCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCC
Q psy15362 59 FNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL 138 (200)
Q Consensus 59 ~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~ 138 (200)
.|+..+.|-..+..+..+....|+++++-+.+. ..++.++.++++|+. ++ +-+.++++. -...|+++.+.|
T Consensus 33 ~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~~~g~~--~~----y~d~~ell~-~~~iDaV~IatP 103 (393)
T 4fb5_A 33 TGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA--NAGLAEARAGEFGFE--KA----TADWRALIA-DPEVDVVSVTTP 103 (393)
T ss_dssp CSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHHHHHTCS--EE----ESCHHHHHH-CTTCCEEEECSC
T ss_pred CCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC--CHHHHHHHHHHhCCC--ee----cCCHHHHhc-CCCCcEEEECCC
Confidence 344445444444455556667789999988863 456778889999984 22 334566653 135798877766
Q ss_pred CCC-chHHHHHHHcCCCeeec
Q psy15362 139 CNG-HTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 139 ~~~-g~~~lEAma~G~PVV~~ 158 (200)
... .-.+++|+.+|++|++-
T Consensus 104 ~~~H~~~a~~al~aGkhVl~E 124 (393)
T 4fb5_A 104 NQFHAEMAIAALEAGKHVWCE 124 (393)
T ss_dssp GGGHHHHHHHHHHTTCEEEEC
T ss_pred hHHHHHHHHHHHhcCCeEEEc
Confidence 443 56699999999999983
No 67
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=88.74 E-value=0.48 Score=43.43 Aligned_cols=141 Identities=11% Similarity=-0.012 Sum_probs=79.2
Q ss_pred hhhhhhhhcCCCCCCEEEEEeCCCCCC-----------CHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCC
Q psy15362 39 IVITSRQQYGLPEDAIVYCNFNQLYKI-----------DPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGL 107 (200)
Q Consensus 39 ~~~~~R~~l~l~~~~~v~~~~~r~~K~-----------~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl 107 (200)
.+..+|++++++++..++++.=.+... ...-++.+.+.+. ++..+++-.. + .+.......+.
T Consensus 524 ~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~--~~~~li~r~H--p---~~~~~~~~~~~ 596 (729)
T 3l7i_A 524 YLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELG--DDYVILLRMH--Y---LISNALDLSGY 596 (729)
T ss_dssp HHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHT--TTEEEEECCC--H---HHHTTCCCTTC
T ss_pred HHHHHHHHhCCCCCCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcC--CCeEEEEecC--c---chhcccccccc
Confidence 346788999999988777776443211 1112344443332 4555555432 2 22222211234
Q ss_pred CCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCC--cchhhhHHHHHhh--cCCCcceec
Q psy15362 108 DQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGE--TLASRVAASQLAT--LGCPELIAR 183 (200)
Q Consensus 108 ~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~--~~~~r~~~~~~~~--~g~~~~ia~ 183 (200)
. ++++-...- .++..+|..||+++.=++ .++.|.+..++|||...-+ .+.... -+++-. .-+|+-++.
T Consensus 597 ~-~~~~~~~~~--~di~~ll~~aD~lITDyS----Sv~fD~~~l~kPiif~~~D~~~Y~~~~-rg~y~d~~~~~pg~~~~ 668 (729)
T 3l7i_A 597 E-NFAIDVSNY--NDVSELFLISDCLITDYS----SVMFDYGILKRPQFFFAYDIDKYDKGL-RGFYMNYMEDLPGPIYT 668 (729)
T ss_dssp T-TTEEECTTC--SCHHHHHHTCSEEEESSC----THHHHHGGGCCCEEEECTTTTTTTSSC-CSBSSCTTSSSSSCEES
T ss_pred C-CcEEeCCCC--cCHHHHHHHhCEEEeech----HHHHhHHhhCCCEEEecCCHHHHhhcc-CCcccChhHhCCCCeEC
Confidence 4 666554432 355567789999985443 6799999999999986332 222100 011111 135667788
Q ss_pred CHHHHHHHHHH
Q psy15362 184 THKEYQDIAIR 194 (200)
Q Consensus 184 ~~~~yv~~a~~ 194 (200)
+.+++++....
T Consensus 669 ~~~eL~~~i~~ 679 (729)
T 3l7i_A 669 EPYGLAKELKN 679 (729)
T ss_dssp SHHHHHHHHTT
T ss_pred CHHHHHHHHhh
Confidence 88888776544
No 68
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=87.83 E-value=4.1 Score=27.90 Aligned_cols=75 Identities=13% Similarity=0.093 Sum_probs=47.9
Q ss_pred CCcEEEEEcCCccc----HHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHH--cCCC
Q psy15362 81 PNSILWLLKFPAVG----EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW--TGTP 154 (200)
Q Consensus 81 p~~~l~ivG~~~~~----~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma--~G~P 154 (200)
|..+.+++++.|.. ...+++.+++.|++ -.|.-.+... +...+..+|+++.+.....-..-++..+ .++|
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~-~~i~~~~~~~---~~~~~~~~D~Ii~t~~l~~~~~~~~~~~~~~~~p 78 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNIN-ATIEAIAETR---LSEVVDRFDVVLLAPQSRFNKKRLEEITKPKGIP 78 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCS-EEEEEECSTT---HHHHTTTCSEEEECSCCSSHHHHHHHHHHHHTCC
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCC-eEEEEecHHH---HHhhcCCCCEEEECCccHHHHHHHHHHhcccCCC
Confidence 34677787765532 46788899999986 4455445443 3334678999998876443333444443 5899
Q ss_pred eeecC
Q psy15362 155 VVTLP 159 (200)
Q Consensus 155 VV~~~ 159 (200)
|+..+
T Consensus 79 v~~I~ 83 (109)
T 2l2q_A 79 IEIIN 83 (109)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 98754
No 69
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=87.46 E-value=2 Score=34.78 Aligned_cols=74 Identities=8% Similarity=-0.060 Sum_probs=52.9
Q ss_pred HHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHc
Q psy15362 73 WVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWT 151 (200)
Q Consensus 73 ~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~ 151 (200)
+.+.+.+.|+..++-+.+ ...+..+++++++|+. . +-+.+++.. .+|+++.+.|... .-.+.+|+..
T Consensus 22 ~~~~l~~~~~~~l~av~d--~~~~~~~~~a~~~~~~-~------~~~~~~ll~---~~D~V~i~tp~~~h~~~~~~al~~ 89 (308)
T 3uuw_A 22 YLPILTKSERFEFVGAFT--PNKVKREKICSDYRIM-P------FDSIESLAK---KCDCIFLHSSTETHYEIIKILLNL 89 (308)
T ss_dssp THHHHTSCSSSEEEEEEC--SCHHHHHHHHHHHTCC-B------CSCHHHHHT---TCSEEEECCCGGGHHHHHHHHHHT
T ss_pred HHHHHHhCCCeEEEEEEC--CCHHHHHHHHHHcCCC-C------cCCHHHHHh---cCCEEEEeCCcHhHHHHHHHHHHC
Confidence 344456678999887665 3467788888888885 1 344566654 8999987776544 4568899999
Q ss_pred CCCeeec
Q psy15362 152 GTPVVTL 158 (200)
Q Consensus 152 G~PVV~~ 158 (200)
|++|++-
T Consensus 90 gk~vl~E 96 (308)
T 3uuw_A 90 GVHVYVD 96 (308)
T ss_dssp TCEEEEC
T ss_pred CCcEEEc
Confidence 9999974
No 70
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=86.62 E-value=1.7 Score=33.69 Aligned_cols=89 Identities=15% Similarity=0.088 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEec-cCCHHHHHhhcccccEEEeCCCCCCchHHH
Q psy15362 68 STLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSN-VAAKEEHVRRGQLADVCLDTPLCNGHTTSM 146 (200)
Q Consensus 68 ~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g-~~~~~~~~~~~~~aDv~l~~~~~~~g~~~l 146 (200)
.+..|..-+.. ....+++++|......+.+++.++..|-..-.=+|+| -..+.. ...|..=|+++.+-|..--..+.
T Consensus 51 ~L~~A~~~i~~-~~~~~ilfV~tk~~~~~~V~k~A~~~g~~~v~~rw~gG~lTN~~-~~~~~~Pdllvv~Dp~~d~~ai~ 128 (202)
T 3j20_B 51 RLKVAGKFLAK-FEPQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPA-VKNFFEPDVLIVTDPRADHQAMR 128 (202)
T ss_dssp HHHHHHHHHHH-SCSSCEEEECCCTTTHHHHHHHHHHHSCCCCCSSCCSSSSSCSS-SSSCCCCSEEEESCTTTSHHHHH
T ss_pred HHHHHHHHHHh-hCCCeEEEEecChHHHHHHHHHHHHHCCceeCceecCCCcccHh-HHhccCCCeEEEeCCccchHHHH
Confidence 44445444443 4457888899765566778888887764321112333 333222 22345667777666655568899
Q ss_pred HHHHcCCCeeec
Q psy15362 147 DVLWTGTPVVTL 158 (200)
Q Consensus 147 EAma~G~PVV~~ 158 (200)
||-..|+|+|+.
T Consensus 129 EA~~l~IP~Ial 140 (202)
T 3j20_B 129 EAVEIGIPIVAL 140 (202)
T ss_dssp HHHHHTCCEEEE
T ss_pred HHHHcCCCEEEE
Confidence 999999999985
No 71
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=82.99 E-value=1.1 Score=37.09 Aligned_cols=68 Identities=13% Similarity=0.036 Sum_probs=47.7
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeec
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~ 158 (200)
++.++-+.+ ...++.++.++++|+. ++ +-+.++++. -...|+++.+.|... .-.+++||.+|++|++-
T Consensus 37 ~~~l~av~d--~~~~~a~~~a~~~g~~--~~----~~d~~~ll~-~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~E 105 (390)
T 4h3v_A 37 HPDLNVLCG--RDAEAVRAAAGKLGWS--TT----ETDWRTLLE-RDDVQLVDVCTPGDSHAEIAIAALEAGKHVLCE 105 (390)
T ss_dssp EEEEEEEEC--SSHHHHHHHHHHHTCS--EE----ESCHHHHTT-CTTCSEEEECSCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CceEEEEEc--CCHHHHHHHHHHcCCC--cc----cCCHHHHhc-CCCCCEEEEeCChHHHHHHHHHHHHcCCCceee
Confidence 457888875 4567888999999984 22 334456543 135788877666444 46799999999999983
No 72
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=82.25 E-value=1.9 Score=33.56 Aligned_cols=79 Identities=15% Similarity=0.091 Sum_probs=50.1
Q ss_pred HCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEec-cCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeee
Q psy15362 79 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSN-VAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVT 157 (200)
Q Consensus 79 ~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g-~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~ 157 (200)
.....+++++|......+.+++.++..|-..-.=+|+| -..+..+ .-+..=|+++..-+...-..+.||...|+|||+
T Consensus 65 ~i~~~~iLfVgTk~~~~~~V~~~A~~~g~~~v~~rwlgG~LTN~~~-~~f~~PdlliV~Dp~~e~~ai~EA~~l~IPvIa 143 (208)
T 1vi6_A 65 RYEPSKILLVAARQYAHKPVQMFSKVVGSDYIVGRFIPGTLTNPML-SEYREPEVVFVNDPAIDKQAVSEATAVGIPVVA 143 (208)
T ss_dssp TSCGGGEEEEECSGGGHHHHHHHHHHHCCEEEESSCCTTTTTCTTS-TTCCCCSEEEESCTTTTHHHHHHHHHTTCCEEE
T ss_pred hcCCCEEEEEeCCHHHHHHHHHHHHHhCCeeecCEECCCcccChhh-HhhCCCCEEEEECCCcchhHHHHHHHhCCCEEE
Confidence 33557888999755556778888887765310001333 2232222 224566777666555556889999999999998
Q ss_pred c
Q psy15362 158 L 158 (200)
Q Consensus 158 ~ 158 (200)
.
T Consensus 144 l 144 (208)
T 1vi6_A 144 L 144 (208)
T ss_dssp E
T ss_pred E
Confidence 5
No 73
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=81.60 E-value=2.3 Score=29.43 Aligned_cols=76 Identities=16% Similarity=0.113 Sum_probs=46.3
Q ss_pred CCcEEEEEcCCccc----HHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHc--CCC
Q psy15362 81 PNSILWLLKFPAVG----EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWT--GTP 154 (200)
Q Consensus 81 p~~~l~ivG~~~~~----~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~--G~P 154 (200)
+..++++++.+|.. -..+++.+++.|++ +.... .+..++...+...|++|.......-..-++..+. |+|
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~---v~i~a-~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ip 80 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVR---VIANS-GAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQ 80 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS---EEEEE-EETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCE
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCc---eEEEE-cchHHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCc
Confidence 45677777765533 25678889999996 44322 1112333445678999876432222445666654 899
Q ss_pred eeecCC
Q psy15362 155 VVTLPG 160 (200)
Q Consensus 155 VV~~~g 160 (200)
|...+.
T Consensus 81 V~vI~~ 86 (108)
T 3nbm_A 81 IVATRG 86 (108)
T ss_dssp EEECCH
T ss_pred EEEeCH
Confidence 998764
No 74
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=81.10 E-value=2.5 Score=33.72 Aligned_cols=89 Identities=8% Similarity=-0.053 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcE---EEecc-CCHHHHHhhcccccEEEeCCCCCCch
Q psy15362 68 STLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRI---LFSNV-AAKEEHVRRGQLADVCLDTPLCNGHT 143 (200)
Q Consensus 68 ~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv---~f~g~-~~~~~~~~~~~~aDv~l~~~~~~~g~ 143 (200)
.+..|+.-+..-....+++++|........+++.++..|.. .| +|+|- ..+... ..+..=|+++..-+..-..
T Consensus 52 ~L~~A~~~i~~i~~~~~iLfVgtk~~~~~~V~~~A~~~g~~--yv~~~RWlgG~LTN~~t-~~~~~PdlliV~Dp~~e~~ 128 (241)
T 2xzm_B 52 KIKLAARVIAAVQHPEDVMVVCSRIYGQRAAIKFAGYTHCK--STSSSRWTPGTLTNYQT-LKYEEPRVLIVTDPRSDFQ 128 (241)
T ss_dssp HHHHHHHHHHHCSSGGGEEEECCSHHHHHHHHHHHHHHTCB--CCCCSSCCTTTTTCTTC-TTCCCCSEEEESCTTTTHH
T ss_pred HHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHhCCE--EeccccccCCcccCccc-cccCCCCEEEEECCCcchH
Confidence 34444443433112467888986533445667777766642 23 34443 332111 2356678877665655568
Q ss_pred HHHHHHHcCCCeeecC
Q psy15362 144 TSMDVLWTGTPVVTLP 159 (200)
Q Consensus 144 ~~lEAma~G~PVV~~~ 159 (200)
.+.||...|+|||+..
T Consensus 129 ai~EA~~l~IPvIalv 144 (241)
T 2xzm_B 129 AIKEASYVNIPVIALC 144 (241)
T ss_dssp HHHHHTTTTCCEEECC
T ss_pred HHHHHHHhCCCEEEEe
Confidence 8999999999999863
No 75
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=80.08 E-value=7 Score=32.24 Aligned_cols=76 Identities=11% Similarity=-0.013 Sum_probs=49.8
Q ss_pred HHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCe
Q psy15362 77 LKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPV 155 (200)
Q Consensus 77 ~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PV 155 (200)
+.+.|+..++.+.+ ...+..+++++++|+. ..+... -+.+++.. -..+|+++.+.|... .-.+.+|+.+|++|
T Consensus 25 l~~~~~~~lv~v~d--~~~~~~~~~a~~~~~~-~~~~~~--~~~~~ll~-~~~~D~V~i~tp~~~h~~~~~~al~aGk~V 98 (362)
T 1ydw_A 25 IHLAPNATISGVAS--RSLEKAKAFATANNYP-ESTKIH--GSYESLLE-DPEIDALYVPLPTSLHVEWAIKAAEKGKHI 98 (362)
T ss_dssp HHHCTTEEEEEEEC--SSHHHHHHHHHHTTCC-TTCEEE--SSHHHHHH-CTTCCEEEECCCGGGHHHHHHHHHTTTCEE
T ss_pred HhhCCCcEEEEEEc--CCHHHHHHHHHHhCCC-CCCeee--CCHHHHhc-CCCCCEEEEcCChHHHHHHHHHHHHCCCeE
Confidence 34578888887765 3456778888888873 222322 23355432 125899987776443 45678899999999
Q ss_pred eec
Q psy15362 156 VTL 158 (200)
Q Consensus 156 V~~ 158 (200)
++-
T Consensus 99 ~~E 101 (362)
T 1ydw_A 99 LLE 101 (362)
T ss_dssp EEC
T ss_pred EEe
Confidence 983
No 76
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=80.00 E-value=1.5 Score=36.07 Aligned_cols=76 Identities=9% Similarity=-0.009 Sum_probs=47.5
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEec-cCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeec
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSN-VAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g-~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~ 158 (200)
..+++++|......+.+++.++..|-..-.=+|+| -..+.. ...++.=|+++.+-+..--..+.||...|+|+|+.
T Consensus 75 ~~~ILfVgTk~~aq~aV~k~A~~tG~~yV~~RWlgGtLTN~~-t~~f~ePdllvV~Dp~~d~qAI~EA~~lnIPtIAL 151 (305)
T 3iz6_A 75 PQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQL-QTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAF 151 (305)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHHHTCEEECSCCCTTTTTTTT-TSCSSCCSEEEESCTTTTHHHHHHHHHHTCCEEEE
T ss_pred CCeEEEEeCcHHHHHHHHHHHHHhCCccccCcccCCcccCcc-cccccCCceeEEeCcccchHHHHHHHHcCCCEEEE
Confidence 35788888654445667777777664210012333 233211 12356678887666666668899999999999975
No 77
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=78.22 E-value=14 Score=30.18 Aligned_cols=76 Identities=8% Similarity=-0.062 Sum_probs=52.3
Q ss_pred HHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHc
Q psy15362 73 WVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWT 151 (200)
Q Consensus 73 ~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~ 151 (200)
+.+.+.+.|+..++-+.+ ...+..++.++++|+. . +-+.+++.. -..+|+++.+.|... .-.+.+|+.+
T Consensus 20 ~~~~l~~~~~~~lvav~d--~~~~~~~~~~~~~g~~-~------~~~~~~~l~-~~~~D~V~i~tp~~~h~~~~~~al~~ 89 (354)
T 3db2_A 20 MADAYTKSEKLKLVTCYS--RTEDKREKFGKRYNCA-G------DATMEALLA-REDVEMVIITVPNDKHAEVIEQCARS 89 (354)
T ss_dssp HHHHHTTCSSEEEEEEEC--SSHHHHHHHHHHHTCC-C------CSSHHHHHH-CSSCCEEEECSCTTSHHHHHHHHHHT
T ss_pred HHHHHHhCCCcEEEEEEC--CCHHHHHHHHHHcCCC-C------cCCHHHHhc-CCCCCEEEEeCChHHHHHHHHHHHHc
Confidence 344455678999887765 3457788888888875 1 334455542 146899987766544 4568899999
Q ss_pred CCCeeec
Q psy15362 152 GTPVVTL 158 (200)
Q Consensus 152 G~PVV~~ 158 (200)
|++|++-
T Consensus 90 gk~vl~E 96 (354)
T 3db2_A 90 GKHIYVE 96 (354)
T ss_dssp TCEEEEE
T ss_pred CCEEEEc
Confidence 9999983
No 78
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=77.98 E-value=7.8 Score=31.69 Aligned_cols=72 Identities=10% Similarity=0.098 Sum_probs=49.1
Q ss_pred HCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeee
Q psy15362 79 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVT 157 (200)
Q Consensus 79 ~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~ 157 (200)
+.|+..++-+.+ ...+..+++++++|+. .++ +-+.+++.. -..+|+++.+.|... .-.+.+|+.+|++|++
T Consensus 24 ~~~~~~l~av~d--~~~~~~~~~~~~~g~~-~~~----~~~~~~ll~-~~~~D~V~i~tp~~~h~~~~~~al~~Gk~vl~ 95 (344)
T 3mz0_A 24 KLSGAEIVAVTD--VNQEAAQKVVEQYQLN-ATV----YPNDDSLLA-DENVDAVLVTSWGPAHESSVLKAIKAQKYVFC 95 (344)
T ss_dssp TCSSEEEEEEEC--SSHHHHHHHHHHTTCC-CEE----ESSHHHHHH-CTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred hCCCcEEEEEEc--CCHHHHHHHHHHhCCC-Cee----eCCHHHHhc-CCCCCEEEECCCchhHHHHHHHHHHCCCcEEE
Confidence 678999887765 3467788888888863 222 233455543 124899987766443 4568899999999998
Q ss_pred c
Q psy15362 158 L 158 (200)
Q Consensus 158 ~ 158 (200)
-
T Consensus 96 E 96 (344)
T 3mz0_A 96 E 96 (344)
T ss_dssp C
T ss_pred c
Confidence 3
No 79
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=77.10 E-value=16 Score=29.61 Aligned_cols=75 Identities=17% Similarity=0.138 Sum_probs=49.7
Q ss_pred HHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCC
Q psy15362 75 NVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGT 153 (200)
Q Consensus 75 ~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~ 153 (200)
+.+.+.|+..++-+.+ ...+..+++++++|+. . .+.+.+++.. -..+|+++.+.|... .-.+.+|+..|+
T Consensus 22 ~~l~~~~~~~l~av~d--~~~~~~~~~~~~~~~~-~-----~~~~~~~ll~-~~~~D~V~i~tp~~~h~~~~~~al~~gk 92 (330)
T 3e9m_A 22 AGLRESAQAEVRGIAS--RRLENAQKMAKELAIP-V-----AYGSYEELCK-DETIDIIYIPTYNQGHYSAAKLALSQGK 92 (330)
T ss_dssp HHHHHSSSEEEEEEBC--SSSHHHHHHHHHTTCC-C-----CBSSHHHHHH-CTTCSEEEECCCGGGHHHHHHHHHHTTC
T ss_pred HHHHhCCCcEEEEEEe--CCHHHHHHHHHHcCCC-c-----eeCCHHHHhc-CCCCCEEEEcCCCHHHHHHHHHHHHCCC
Confidence 3344568888887765 3356778888888873 1 1233455442 126899977766443 455789999999
Q ss_pred Ceeec
Q psy15362 154 PVVTL 158 (200)
Q Consensus 154 PVV~~ 158 (200)
+|++-
T Consensus 93 ~vl~E 97 (330)
T 3e9m_A 93 PVLLE 97 (330)
T ss_dssp CEEEC
T ss_pred eEEEe
Confidence 99973
No 80
>2hqs_H Peptidoglycan-associated lipoprotein; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: d.79.7.1 PDB: 2w8b_C 1oap_A
Probab=76.03 E-value=10 Score=26.14 Aligned_cols=52 Identities=13% Similarity=0.157 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHCCCcEEEEEcCCcc---c----------HHHHHHHHHHcCCCCCcEEEeccC
Q psy15362 67 PSTLQMWVNVLKAVPNSILWLLKFPAV---G----------EANIQATAQALGLDQHRILFSNVA 118 (200)
Q Consensus 67 ~~~l~a~~~i~~~~p~~~l~ivG~~~~---~----------~~~l~~~~~~~gl~~~rv~f~g~~ 118 (200)
...++.++..++..|+.++.|.|.... . ...++++..+.|++++|+...|+-
T Consensus 22 ~~~L~~ia~~l~~~p~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gi~~~ri~~~g~G 86 (118)
T 2hqs_H 22 AQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYG 86 (118)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECT
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEec
Confidence 356778888889999999999996321 1 023455566679987899988763
No 81
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=75.15 E-value=5.3 Score=30.10 Aligned_cols=66 Identities=15% Similarity=0.020 Sum_probs=44.9
Q ss_pred cccccEEEeCCCCCCc--hHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCc-ceecCHHHHHHHHHHhhc
Q psy15362 127 GQLADVCLDTPLCNGH--TTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPE-LIARTHKEYQDIAIRLGT 197 (200)
Q Consensus 127 ~~~aDv~l~~~~~~~g--~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~-~ia~~~~~yv~~a~~l~~ 197 (200)
...+|.++.- |=+.| ..+.||+..++||+..++.. ...+++....... .+++|+++.++...++.+
T Consensus 105 ~~~sda~Ivl-pGg~GTL~E~~~al~~~kpV~~l~~~~----~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 105 ALSSNVLVAV-GMGPGTAAEVALALKAKKPVVLLGTQP----EAEKFFTSLDAGLVHVAADVAGAIAAVKQLLA 173 (176)
T ss_dssp GGGCSEEEEE-SCCHHHHHHHHHHHHTTCCEEEESCCH----HHHHHHHHHCTTTEEEESSHHHHHHHHHHHHH
T ss_pred HHhCCEEEEe-cCCccHHHHHHHHHHhCCcEEEEcCcc----cccccCChhhcCeEEEcCCHHHHHHHHHHHHH
Confidence 4567887542 21224 36999999999999988732 4455665544444 467999999988887764
No 82
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=75.05 E-value=12 Score=30.33 Aligned_cols=80 Identities=15% Similarity=0.103 Sum_probs=49.8
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHH-cCCCeeecCCCc-chhhh--HHHH
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW-TGTPVVTLPGET-LASRV--AASQ 171 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma-~G~PVV~~~g~~-~~~r~--~~~~ 171 (200)
..+++.+++.|+. +++-..+.+....+...+|++=-++..-.-..++++++ .|+||+...|.. -.+.+ ....
T Consensus 92 ~~l~~~~~~~Gl~----~~te~~d~~~~~~l~~~vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~ 167 (276)
T 1vs1_A 92 KLLRRAGDEAGLP----VVTEVLDPRHVETVSRYADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEY 167 (276)
T ss_dssp HHHHHHHHHHTCC----EEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCc----EEEecCCHHHHHHHHHhCCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHH
Confidence 4677889999997 55555554333333344898866665444455777666 899999988865 22322 2233
Q ss_pred HhhcCCCc
Q psy15362 172 LATLGCPE 179 (200)
Q Consensus 172 ~~~~g~~~ 179 (200)
+...|.++
T Consensus 168 i~~~Gn~~ 175 (276)
T 1vs1_A 168 ILLEGNWQ 175 (276)
T ss_dssp HHHTTCCC
T ss_pred HHHcCCCe
Confidence 44556654
No 83
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=75.03 E-value=7.6 Score=26.77 Aligned_cols=64 Identities=14% Similarity=0.055 Sum_probs=40.4
Q ss_pred CcEEEEEcCCccc-----HHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHc-CCCe
Q psy15362 82 NSILWLLKFPAVG-----EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWT-GTPV 155 (200)
Q Consensus 82 ~~~l~ivG~~~~~-----~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~-G~PV 155 (200)
..+.+++++.|.. ..++++.+++.|++ -.|.-.+.. ++...+..+|+++.+.+... .. ++||
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~-~~V~~~~~~---~~~~~~~~~DlIist~~l~~--------~~~~ipv 88 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIP-VELIQCRVN---EIETYMDGVHLICTTARVDR--------SFGDIPL 88 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC-EEEEEECTT---TTTTSTTSCSEEEESSCCCC--------CSTTCCE
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe-EEEEEecHH---HHhhccCCCCEEEECCcccc--------ccCCCCE
Confidence 3567787765543 35678889999986 444444433 33334567999998876431 12 6788
Q ss_pred ee
Q psy15362 156 VT 157 (200)
Q Consensus 156 V~ 157 (200)
+.
T Consensus 89 i~ 90 (113)
T 1tvm_A 89 VH 90 (113)
T ss_dssp EC
T ss_pred EE
Confidence 75
No 84
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=74.58 E-value=13 Score=30.30 Aligned_cols=76 Identities=17% Similarity=0.211 Sum_probs=50.6
Q ss_pred HHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcC
Q psy15362 74 VNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTG 152 (200)
Q Consensus 74 ~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G 152 (200)
.+.+.+.|+..++-+.+ ...+..+++++++|+. ++ +-+.+++.. -..+|+++.+.|... .-.+.+|+.+|
T Consensus 18 ~~~l~~~~~~~l~av~d--~~~~~~~~~~~~~~~~--~~----~~~~~~ll~-~~~~D~V~i~tp~~~h~~~~~~al~~g 88 (344)
T 3ezy_A 18 AENLKMIDDAILYAISD--VREDRLREMKEKLGVE--KA----YKDPHELIE-DPNVDAVLVCSSTNTHSELVIACAKAK 88 (344)
T ss_dssp HHHGGGSTTEEEEEEEC--SCHHHHHHHHHHHTCS--EE----ESSHHHHHH-CTTCCEEEECSCGGGHHHHHHHHHHTT
T ss_pred HHHHHhCCCcEEEEEEC--CCHHHHHHHHHHhCCC--ce----eCCHHHHhc-CCCCCEEEEcCCCcchHHHHHHHHhcC
Confidence 34445578888887765 3456778888888873 22 233455543 126899987766443 34588999999
Q ss_pred CCeeec
Q psy15362 153 TPVVTL 158 (200)
Q Consensus 153 ~PVV~~ 158 (200)
++|++-
T Consensus 89 k~v~~E 94 (344)
T 3ezy_A 89 KHVFCE 94 (344)
T ss_dssp CEEEEE
T ss_pred CeEEEE
Confidence 999974
No 85
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=74.32 E-value=11 Score=30.61 Aligned_cols=73 Identities=18% Similarity=0.030 Sum_probs=48.6
Q ss_pred HHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc--cccEEEeCCCCCC-chHHHHHHH
Q psy15362 74 VNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCLDTPLCNG-HTTSMDVLW 150 (200)
Q Consensus 74 ~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~--~aDv~l~~~~~~~-g~~~lEAma 150 (200)
.+.+.+.|+..++-+.+ ...+..+++++++|.. . +-+.+++ +. .+|+++.+.|... .-.+.+|+.
T Consensus 20 ~~~l~~~~~~~l~av~d--~~~~~~~~~a~~~g~~----~---~~~~~~~---l~~~~~D~V~i~tp~~~h~~~~~~al~ 87 (344)
T 3euw_A 20 AANIAANPDLELVVIAD--PFIEGAQRLAEANGAE----A---VASPDEV---FARDDIDGIVIGSPTSTHVDLITRAVE 87 (344)
T ss_dssp HHHHHHCTTEEEEEEEC--SSHHHHHHHHHTTTCE----E---ESSHHHH---TTCSCCCEEEECSCGGGHHHHHHHHHH
T ss_pred HHHHHhCCCcEEEEEEC--CCHHHHHHHHHHcCCc----e---eCCHHHH---hcCCCCCEEEEeCCchhhHHHHHHHHH
Confidence 33445578888887665 3456777788876632 1 2233444 44 7899987766443 456889999
Q ss_pred cCCCeeec
Q psy15362 151 TGTPVVTL 158 (200)
Q Consensus 151 ~G~PVV~~ 158 (200)
+|++|++-
T Consensus 88 ~gk~v~~E 95 (344)
T 3euw_A 88 RGIPALCE 95 (344)
T ss_dssp TTCCEEEC
T ss_pred cCCcEEEE
Confidence 99999973
No 86
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=74.29 E-value=16 Score=31.10 Aligned_cols=78 Identities=10% Similarity=0.072 Sum_probs=47.3
Q ss_pred HHHCCCcEEEEEcCCcccHHHHHHHHH---HcCCCCCcEEEec-cCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHc
Q psy15362 77 LKAVPNSILWLLKFPAVGEANIQATAQ---ALGLDQHRILFSN-VAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWT 151 (200)
Q Consensus 77 ~~~~p~~~l~ivG~~~~~~~~l~~~~~---~~gl~~~rv~f~g-~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~ 151 (200)
+.+.|++.++-+.+. ..++.++.++ ++|+. +--.+.+ .-+.+++..- ...|+++.+.|... .-.+++||.+
T Consensus 39 l~~~~~~~lvav~d~--~~~~~~~~a~~~~~~g~~-~~~~~~~~~~~~~~ll~~-~~vD~V~i~tp~~~h~~~~~~al~a 114 (444)
T 2ixa_A 39 MARRDDVEIVAFADP--DPYMVGRAQEILKKNGKK-PAKVFGNGNDDYKNMLKD-KNIDAVFVSSPWEWHHEHGVAAMKA 114 (444)
T ss_dssp HHTCTTEEEEEEECS--CHHHHHHHHHHHHHTTCC-CCEEECSSTTTHHHHTTC-TTCCEEEECCCGGGHHHHHHHHHHT
T ss_pred HHhCCCcEEEEEEeC--CHHHHHHHHHHHHhcCCC-CCceeccCCCCHHHHhcC-CCCCEEEEcCCcHHHHHHHHHHHHC
Confidence 445789998877753 3455555544 55763 2223332 2233444320 25899987776443 4568899999
Q ss_pred CCCeeec
Q psy15362 152 GTPVVTL 158 (200)
Q Consensus 152 G~PVV~~ 158 (200)
|++|++-
T Consensus 115 GkhV~~E 121 (444)
T 2ixa_A 115 GKIVGME 121 (444)
T ss_dssp TCEEEEC
T ss_pred CCeEEEe
Confidence 9999983
No 87
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=74.04 E-value=10 Score=30.77 Aligned_cols=71 Identities=8% Similarity=0.077 Sum_probs=46.8
Q ss_pred HCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeee
Q psy15362 79 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVT 157 (200)
Q Consensus 79 ~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~ 157 (200)
+.|+.+++.+.+ ...+..+++++++|.. ++ + -+.+++..- ..+|+++.+.|... .-.+.+|+..|++|++
T Consensus 30 ~~~~~~~vav~d--~~~~~~~~~a~~~g~~--~~-~---~~~~~~l~~-~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~ 100 (346)
T 3cea_A 30 KIQGVKLVAACA--LDSNQLEWAKNELGVE--TT-Y---TNYKDMIDT-ENIDAIFIVAPTPFHPEMTIYAMNAGLNVFC 100 (346)
T ss_dssp TCSSEEEEEEEC--SCHHHHHHHHHTTCCS--EE-E---SCHHHHHTT-SCCSEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred cCCCcEEEEEec--CCHHHHHHHHHHhCCC--cc-c---CCHHHHhcC-CCCCEEEEeCChHhHHHHHHHHHHCCCEEEE
Confidence 578888877765 3456777778877763 22 2 233454321 26899987776443 3567889999999987
Q ss_pred c
Q psy15362 158 L 158 (200)
Q Consensus 158 ~ 158 (200)
-
T Consensus 101 e 101 (346)
T 3cea_A 101 E 101 (346)
T ss_dssp C
T ss_pred c
Confidence 3
No 88
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=73.88 E-value=11 Score=30.90 Aligned_cols=73 Identities=11% Similarity=-0.031 Sum_probs=50.0
Q ss_pred HHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCC
Q psy15362 75 NVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGT 153 (200)
Q Consensus 75 ~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~ 153 (200)
..+.+.|+..++-+.+ ...+..+++++++|+. .+ .+.+++.. -...|+++.+.|... .-.+.+|+.+|+
T Consensus 45 ~~l~~~~~~~l~av~d--~~~~~~~~~a~~~g~~----~~---~~~~~ll~-~~~~D~V~i~tp~~~h~~~~~~al~aGk 114 (350)
T 3rc1_A 45 PALEAEPLTEVTAIAS--RRWDRAKRFTERFGGE----PV---EGYPALLE-RDDVDAVYVPLPAVLHAEWIDRALRAGK 114 (350)
T ss_dssp HHHHHCTTEEEEEEEE--SSHHHHHHHHHHHCSE----EE---ESHHHHHT-CTTCSEEEECCCGGGHHHHHHHHHHTTC
T ss_pred HHHHhCCCeEEEEEEc--CCHHHHHHHHHHcCCC----Cc---CCHHHHhc-CCCCCEEEECCCcHHHHHHHHHHHHCCC
Confidence 3345578888886664 3456778888888874 22 23455542 135899987776544 456889999999
Q ss_pred Ceee
Q psy15362 154 PVVT 157 (200)
Q Consensus 154 PVV~ 157 (200)
+|++
T Consensus 115 ~Vl~ 118 (350)
T 3rc1_A 115 HVLA 118 (350)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 9997
No 89
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=73.87 E-value=14 Score=29.78 Aligned_cols=75 Identities=9% Similarity=-0.075 Sum_probs=48.3
Q ss_pred HHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcC
Q psy15362 74 VNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTG 152 (200)
Q Consensus 74 ~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G 152 (200)
.+.+.+.|+..++.+.+ ...+..+++++++|.. .. +.+.+++. -..+|+++.+.|... .-.+.+|+.+|
T Consensus 17 ~~~l~~~~~~~~~~v~d--~~~~~~~~~~~~~~~~----~~--~~~~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~g 86 (325)
T 2ho3_A 17 IEAAHTSGEYQLVAIYS--RKLETAATFASRYQNI----QL--FDQLEVFF--KSSFDLVYIASPNSLHFAQAKAALSAG 86 (325)
T ss_dssp HHHHHHTTSEEEEEEEC--SSHHHHHHHGGGSSSC----EE--ESCHHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTT
T ss_pred HHHHHhCCCeEEEEEEe--CCHHHHHHHHHHcCCC----eE--eCCHHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcC
Confidence 33344568888876664 3456677777776652 11 22345543 157899987776443 45678899999
Q ss_pred CCeeec
Q psy15362 153 TPVVTL 158 (200)
Q Consensus 153 ~PVV~~ 158 (200)
++|++-
T Consensus 87 k~V~~E 92 (325)
T 2ho3_A 87 KHVILE 92 (325)
T ss_dssp CEEEEE
T ss_pred CcEEEe
Confidence 999974
No 90
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=73.59 E-value=9 Score=31.99 Aligned_cols=72 Identities=11% Similarity=0.076 Sum_probs=49.7
Q ss_pred HHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCe
Q psy15362 77 LKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPV 155 (200)
Q Consensus 77 ~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PV 155 (200)
+.+.|+..++-+.+ ...++.++.++++|+. .+ -+.+++..- ...|+++.+.|... .-.+.+|+.+|++|
T Consensus 22 l~~~~~~~l~av~d--~~~~~~~~~a~~~g~~----~~---~~~~ell~~-~~vD~V~i~tp~~~H~~~~~~al~aGk~V 91 (387)
T 3moi_A 22 MRHHPDAQIVAACD--PNEDVRERFGKEYGIP----VF---ATLAEMMQH-VQMDAVYIASPHQFHCEHVVQASEQGLHI 91 (387)
T ss_dssp HHHCTTEEEEEEEC--SCHHHHHHHHHHHTCC----EE---SSHHHHHHH-SCCSEEEECSCGGGHHHHHHHHHHTTCEE
T ss_pred HHhCCCeEEEEEEe--CCHHHHHHHHHHcCCC----eE---CCHHHHHcC-CCCCEEEEcCCcHHHHHHHHHHHHCCCce
Confidence 34678898887775 3456777888888874 22 344565531 24899987766433 35688999999999
Q ss_pred eec
Q psy15362 156 VTL 158 (200)
Q Consensus 156 V~~ 158 (200)
++-
T Consensus 92 l~E 94 (387)
T 3moi_A 92 IVE 94 (387)
T ss_dssp EEC
T ss_pred eee
Confidence 984
No 91
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=73.56 E-value=15 Score=29.97 Aligned_cols=73 Identities=16% Similarity=0.042 Sum_probs=49.6
Q ss_pred HHHC-CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCC
Q psy15362 77 LKAV-PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTP 154 (200)
Q Consensus 77 ~~~~-p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~P 154 (200)
+.+. |++.++-+.+ ...++.+++++++|+. + . +-+.+++.. -...|+++.+.|... .-.+.+|+.+|++
T Consensus 38 l~~~~~~~~lvav~d--~~~~~~~~~a~~~~~~--~-~---~~~~~~ll~-~~~vD~V~i~tp~~~H~~~~~~al~aGkh 108 (340)
T 1zh8_A 38 LKNLSHLFEITAVTS--RTRSHAEEFAKMVGNP--A-V---FDSYEELLE-SGLVDAVDLTLPVELNLPFIEKALRKGVH 108 (340)
T ss_dssp HHTTTTTEEEEEEEC--SSHHHHHHHHHHHSSC--E-E---ESCHHHHHH-SSCCSEEEECCCGGGHHHHHHHHHHTTCE
T ss_pred HHhCCCceEEEEEEc--CCHHHHHHHHHHhCCC--c-c---cCCHHHHhc-CCCCCEEEEeCCchHHHHHHHHHHHCCCc
Confidence 3455 7888887775 3467788888888863 1 1 233456543 135899987766443 4568899999999
Q ss_pred eeec
Q psy15362 155 VVTL 158 (200)
Q Consensus 155 VV~~ 158 (200)
|++-
T Consensus 109 Vl~E 112 (340)
T 1zh8_A 109 VICE 112 (340)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9983
No 92
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=73.31 E-value=6.5 Score=33.57 Aligned_cols=76 Identities=12% Similarity=0.030 Sum_probs=49.9
Q ss_pred HHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc--cccEEEeCCCCCC-chHHHHHHHcC
Q psy15362 76 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCLDTPLCNG-HTTSMDVLWTG 152 (200)
Q Consensus 76 i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~--~aDv~l~~~~~~~-g~~~lEAma~G 152 (200)
.+.+.|+..++.+.+ ...+..+++++++|+....+.. +-+.++ ++. .+|+++.+.|... .-.+.+|+.+|
T Consensus 102 ~l~~~~~~~lvav~d--~~~~~~~~~a~~~g~~~~~~~~--~~~~~~---ll~~~~vD~V~iatp~~~h~~~~~~al~aG 174 (433)
T 1h6d_A 102 GFAGCQHSRIEALVS--GNAEKAKIVAAEYGVDPRKIYD--YSNFDK---IAKDPKIDAVYIILPNSLHAEFAIRAFKAG 174 (433)
T ss_dssp HTTTCSSEEEEEEEC--SCHHHHHHHHHHTTCCGGGEEC--SSSGGG---GGGCTTCCEEEECSCGGGHHHHHHHHHHTT
T ss_pred HHhhCCCcEEEEEEc--CCHHHHHHHHHHhCCCcccccc--cCCHHH---HhcCCCCCEEEEcCCchhHHHHHHHHHHCC
Confidence 344567888877765 3456778888888874112322 222334 444 6899987776443 45688999999
Q ss_pred CCeeec
Q psy15362 153 TPVVTL 158 (200)
Q Consensus 153 ~PVV~~ 158 (200)
++|++-
T Consensus 175 k~Vl~E 180 (433)
T 1h6d_A 175 KHVMCE 180 (433)
T ss_dssp CEEEEC
T ss_pred CcEEEc
Confidence 999983
No 93
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=73.13 E-value=19 Score=29.15 Aligned_cols=74 Identities=12% Similarity=0.012 Sum_probs=50.1
Q ss_pred HHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcC
Q psy15362 74 VNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTG 152 (200)
Q Consensus 74 ~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G 152 (200)
.+.+.+.|+..++-+.+ ...+..+++++++|+ . +-+.+++.. -..+|+++.+.|... .-.+.+|+..|
T Consensus 19 ~~~l~~~~~~~l~av~d--~~~~~~~~~~~~~~~--~------~~~~~~~l~-~~~~D~V~i~tp~~~h~~~~~~al~~g 87 (331)
T 4hkt_A 19 AKAVSGNADARLVAVAD--AFPAAAEAIAGAYGC--E------VRTIDAIEA-AADIDAVVICTPTDTHADLIERFARAG 87 (331)
T ss_dssp HHHHHHCTTEEEEEEEC--SSHHHHHHHHHHTTC--E------ECCHHHHHH-CTTCCEEEECSCGGGHHHHHHHHHHTT
T ss_pred HHHHhhCCCcEEEEEEC--CCHHHHHHHHHHhCC--C------cCCHHHHhc-CCCCCEEEEeCCchhHHHHHHHHHHcC
Confidence 33445578998887665 345677888888776 1 334455543 126899987766443 45688999999
Q ss_pred CCeeec
Q psy15362 153 TPVVTL 158 (200)
Q Consensus 153 ~PVV~~ 158 (200)
++|++-
T Consensus 88 k~v~~E 93 (331)
T 4hkt_A 88 KAIFCE 93 (331)
T ss_dssp CEEEEC
T ss_pred CcEEEe
Confidence 999973
No 94
>2aiz_P Outer membrane protein P6; alpha-beta sandwich; HET: UDP AMU DGL 6CL DAL; NMR {Haemophilus influenzae} SCOP: d.79.7.1
Probab=72.80 E-value=12 Score=26.65 Aligned_cols=51 Identities=12% Similarity=0.111 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHCCCcEEEEEcCCcc---c----------HHHHHHHHHHcCCCCCcEEEeccC
Q psy15362 68 STLQMWVNVLKAVPNSILWLLKFPAV---G----------EANIQATAQALGLDQHRILFSNVA 118 (200)
Q Consensus 68 ~~l~a~~~i~~~~p~~~l~ivG~~~~---~----------~~~l~~~~~~~gl~~~rv~f~g~~ 118 (200)
..|+.++.+++..|+.++.|.|+... . ...+++++.+.|++++|+...|+-
T Consensus 47 ~~L~~ia~~L~~~p~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gi~~~ri~~~g~G 110 (134)
T 2aiz_P 47 QILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSYG 110 (134)
T ss_dssp HHHHHHHHHHHHSTTCCEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECT
T ss_pred HHHHHHHHHHHHCCCceEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEC
Confidence 46777788888999999999996321 1 023455566679987899988874
No 95
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=72.61 E-value=1.4 Score=35.38 Aligned_cols=76 Identities=12% Similarity=0.061 Sum_probs=47.9
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEec-cCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeec
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSN-VAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g-~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~ 158 (200)
..+++++|........+++.++..|-..-.=+|+| -..+... .-++.=|+++.+-|..-...+.||...|+|+|+.
T Consensus 70 ~~~vlfVgTk~~~q~~V~k~A~~~g~~~v~~rwlgGtLTN~~t-~~f~~PdllvV~Dp~~d~~ai~EA~~l~IP~Ial 146 (252)
T 3u5c_A 70 PEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYIT-RSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIAL 146 (252)
T ss_dssp GGGEEEEECSHHHHHHHHHHHHHSSCEEEESCCCTTSSSCTTS-TTCCCCSEEEESCTTTTHHHHHHHHTTTCCEEEE
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHhCCceecCcccCCcccChhh-hhccCCceEEEeCCccchHHHHHHHHcCCCEEEE
Confidence 46788888754445667788887664210011333 2222111 3356778887666665668899999999999975
No 96
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=72.48 E-value=3.1 Score=33.38 Aligned_cols=76 Identities=12% Similarity=0.059 Sum_probs=46.1
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEecc-CCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeec
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNV-AAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~-~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~ 158 (200)
..+++++|......+.+++.++..|-..-.=+|+|- ..+.. ...+..=|+++..-+...-..+.||...|+|||+.
T Consensus 104 ~~~iLfVgTk~~aq~~V~~~A~~~g~~yv~~RWlgG~LTN~~-~~~f~~PdlliV~Dp~~e~~AI~EA~~lgIPvIal 180 (253)
T 3bch_A 104 PADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQI-QAAFREPRLLVVTDPRADHQPLTEASYVNLPTIAL 180 (253)
T ss_dssp GGGEEEEECSHHHHHHHHHHHHHHCCEEEESCCCTTTTTCCS-CSTTCSCSEEEESCTTTTHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHhCCeeecceecCCcccCcc-ccccCCCCEEEEECCCccchHHHHHHHhCCCEEEE
Confidence 467888886544456677778776643100113332 22111 11245567776555555568899999999999985
No 97
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=71.61 E-value=4.1 Score=33.65 Aligned_cols=81 Identities=9% Similarity=-0.071 Sum_probs=48.9
Q ss_pred HHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEecc------------CCHHHHHhhcccccEEEeCCCCC
Q psy15362 73 WVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNV------------AAKEEHVRRGQLADVCLDTPLCN 140 (200)
Q Consensus 73 ~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~------------~~~~~~~~~~~~aDv~l~~~~~~ 140 (200)
+.+.+.+.|+..++.+.+. ..+....+++..|++ -.-.|.+. -+.+++ +..+|+++.+.|..
T Consensus 17 ~~r~l~~~~~~elvav~d~--~~~~~~~~~~~~g~~-~~~~~~~~v~~~~~~~~~v~~d~~~l---~~~vDvV~~aTp~~ 90 (334)
T 2czc_A 17 VAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIP-VYAASEEFIPRFEKEGFEVAGTLNDL---LEKVDIIVDATPGG 90 (334)
T ss_dssp HHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCC-EEESSGGGHHHHHHHTCCCSCBHHHH---HTTCSEEEECCSTT
T ss_pred HHHHHhcCCCCEEEEEEcC--CHHHHHHHHHhcCcc-ccccccccceeccCCceEEcCcHHHh---ccCCCEEEECCCcc
Confidence 3444556799998888753 234566777777654 11111111 123343 35899999887754
Q ss_pred C-chHHHHHHHcCCCeeecC
Q psy15362 141 G-HTTSMDVLWTGTPVVTLP 159 (200)
Q Consensus 141 ~-g~~~lEAma~G~PVV~~~ 159 (200)
. -.....++.+|++||...
T Consensus 91 ~h~~~a~~~l~aGk~Vi~sa 110 (334)
T 2czc_A 91 IGAKNKPLYEKAGVKAIFQG 110 (334)
T ss_dssp HHHHHHHHHHHHTCEEEECT
T ss_pred ccHHHHHHHHHcCCceEeec
Confidence 3 234567888999999653
No 98
>3td3_A Outer membrane protein OMP38; OMPA-like fold, cell-WALL attachment, peptidoglycan-binding, protein,peptide binding protein; 1.59A {Acinetobacter baumannii} PDB: 3td4_A* 3td5_A*
Probab=70.99 E-value=19 Score=24.78 Aligned_cols=52 Identities=12% Similarity=0.151 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHCCCcEEEEEcCCcc---cH----------HHHHHHHH-HcCCCCCcEEEeccC
Q psy15362 67 PSTLQMWVNVLKAVPNSILWLLKFPAV---GE----------ANIQATAQ-ALGLDQHRILFSNVA 118 (200)
Q Consensus 67 ~~~l~a~~~i~~~~p~~~l~ivG~~~~---~~----------~~l~~~~~-~~gl~~~rv~f~g~~ 118 (200)
...++.++.+++..|+.++.|.|.... .. ..+++.+. ++|+.++|+...|+-
T Consensus 30 ~~~L~~~a~~l~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~aV~~~L~~~~Gi~~~ri~~~g~G 95 (123)
T 3td3_A 30 KPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFA 95 (123)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEEECCCSCSCHHHHHHHHHHHHHHHHHHHHHHSCCCGGGEEEEECT
T ss_pred HHHHHHHHHHHHhCCCceEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCHHHEEEEEEC
Confidence 356778888899999999999996321 11 23344455 479988899988863
No 99
>2kgw_A Outer membrane protein A; OMPA-L membrane, transmembrane; NMR {Mycobacterium tuberculosis} PDB: 2lca_A 2lbt_A
Probab=70.80 E-value=11 Score=26.35 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHCCCcEEEEEcCCcc---cH----------HHHHHHHHHcCCCCCcEEEeccC
Q psy15362 68 STLQMWVNVLKAVPNSILWLLKFPAV---GE----------ANIQATAQALGLDQHRILFSNVA 118 (200)
Q Consensus 68 ~~l~a~~~i~~~~p~~~l~ivG~~~~---~~----------~~l~~~~~~~gl~~~rv~f~g~~ 118 (200)
..|+.++.+++..|+.++.|.|+... .. ..+++++.+.|+..+|+...|+-
T Consensus 41 ~~L~~ia~~l~~~~~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gi~~~ri~~~g~G 104 (129)
T 2kgw_A 41 EILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGLG 104 (129)
T ss_dssp HHHHHHHHHHHTCTTSCEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEECT
T ss_pred HHHHHHHHHHHhCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEc
Confidence 46777888888999999999997321 00 13445555679987899988764
No 100
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=70.23 E-value=11 Score=31.94 Aligned_cols=76 Identities=16% Similarity=0.075 Sum_probs=50.6
Q ss_pred HHHCCCcEEEE-EcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc----ccccEEEeCCCCCC-chHHHHHHH
Q psy15362 77 LKAVPNSILWL-LKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG----QLADVCLDTPLCNG-HTTSMDVLW 150 (200)
Q Consensus 77 ~~~~p~~~l~i-vG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~----~~aDv~l~~~~~~~-g~~~lEAma 150 (200)
+...++..++. +.+ ...++.++.++++|+...++ +-+.+++..-- ...|+++.+.|... .-.+.+|+.
T Consensus 59 ~~~~~~~~lva~v~d--~~~~~a~~~a~~~g~~~~~~----~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~ 132 (417)
T 3v5n_A 59 ARLDDHYELVAGALS--STPEKAEASGRELGLDPSRV----YSDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLK 132 (417)
T ss_dssp HHHTSCEEEEEEECC--SSHHHHHHHHHHHTCCGGGB----CSCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHHT
T ss_pred HhhCCCcEEEEEEeC--CCHHHHHHHHHHcCCCcccc----cCCHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHHh
Confidence 44567788774 554 34677888899999851122 23446655410 23899987776554 456889999
Q ss_pred cCCCeeec
Q psy15362 151 TGTPVVTL 158 (200)
Q Consensus 151 ~G~PVV~~ 158 (200)
+|++|++-
T Consensus 133 aGkhVl~E 140 (417)
T 3v5n_A 133 RGIHVICD 140 (417)
T ss_dssp TTCEEEEE
T ss_pred CCCeEEEE
Confidence 99999983
No 101
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=70.16 E-value=22 Score=23.91 Aligned_cols=108 Identities=10% Similarity=-0.008 Sum_probs=58.9
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc--ccccEEEeCCCCCCchHHHHHHH--c-CCCe
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVCLDTPLCNGHTTSMDVLW--T-GTPV 155 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~--~~aDv~l~~~~~~~g~~~lEAma--~-G~PV 155 (200)
...+++++.+.......+++.+++.|.. |..... .++....+ ...|+++ .+...|..+++.+. . .+||
T Consensus 17 ~~~~ilivdd~~~~~~~l~~~L~~~g~~---v~~~~~--~~~al~~l~~~~~dlvi--~~~~~g~~~~~~l~~~~~~~~i 89 (137)
T 2pln_A 17 GSMRVLLIEKNSVLGGEIEKGLNVKGFM---ADVTES--LEDGEYLMDIRNYDLVM--VSDKNALSFVSRIKEKHSSIVV 89 (137)
T ss_dssp TCSEEEEECSCHHHHHHHHHHHHHTTCE---EEEESC--HHHHHHHHHHSCCSEEE--ECSTTHHHHHHHHHHHSTTSEE
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCcE---EEEeCC--HHHHHHHHHcCCCCEEE--EcCccHHHHHHHHHhcCCCccE
Confidence 4567777765333345677777776653 443322 23433332 2468888 34344666666665 3 7889
Q ss_pred eecCCCcchhhhHHHHHhhcCCCcceec---CHHHHHHHHHHhhc
Q psy15362 156 VTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLGT 197 (200)
Q Consensus 156 V~~~g~~~~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~~l~~ 197 (200)
|...+..-..... -....|..+++.. +.+++.....++..
T Consensus 90 i~ls~~~~~~~~~--~~~~~g~~~~l~kP~~~~~~l~~~i~~~~~ 132 (137)
T 2pln_A 90 LVSSDNPTSEEEV--HAFEQGADDYIAKPYRSIKALVARIEARLR 132 (137)
T ss_dssp EEEESSCCHHHHH--HHHHTTCSEEEESSCSCHHHHHHHHHHHTC
T ss_pred EEEeCCCCHHHHH--HHHHcCCceeeeCCCCCHHHHHHHHHHHHh
Confidence 8764432211111 1224577777663 67777776665543
No 102
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=69.33 E-value=12 Score=30.31 Aligned_cols=74 Identities=15% Similarity=0.056 Sum_probs=47.6
Q ss_pred HHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcC
Q psy15362 74 VNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTG 152 (200)
Q Consensus 74 ~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G 152 (200)
.+.+.+.|+..++ +.+ ...+..+++++++|+. . .+. +..+.. -..+|+++.+.|... .-.+.+|+.+|
T Consensus 19 ~~~l~~~~~~~l~-v~d--~~~~~~~~~a~~~g~~-~--~~~---~~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~G 87 (323)
T 1xea_A 19 LPVLAQWPDIELV-LCT--RNPKVLGTLATRYRVS-A--TCT---DYRDVL--QYGVDAVMIHAATDVHSTLAAFFLHLG 87 (323)
T ss_dssp HHHHTTSTTEEEE-EEC--SCHHHHHHHHHHTTCC-C--CCS---STTGGG--GGCCSEEEECSCGGGHHHHHHHHHHTT
T ss_pred HHHHHhCCCceEE-EEe--CCHHHHHHHHHHcCCC-c--ccc---CHHHHh--hcCCCEEEEECCchhHHHHHHHHHHCC
Confidence 3344556888888 654 3456778888888874 2 122 222222 257899987776443 34577899999
Q ss_pred CCeeec
Q psy15362 153 TPVVTL 158 (200)
Q Consensus 153 ~PVV~~ 158 (200)
++|++-
T Consensus 88 k~V~~E 93 (323)
T 1xea_A 88 IPTFVD 93 (323)
T ss_dssp CCEEEE
T ss_pred CeEEEe
Confidence 999873
No 103
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=69.01 E-value=21 Score=28.85 Aligned_cols=76 Identities=16% Similarity=0.127 Sum_probs=50.1
Q ss_pred HHHHHHCCC--cEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHH
Q psy15362 74 VNVLKAVPN--SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLW 150 (200)
Q Consensus 74 ~~i~~~~p~--~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma 150 (200)
.+.+.+.|+ .+++-+.+ ...++.+++++++|+. ++ +-+.+++.. -...|+++.+.|... .-.+.+|+.
T Consensus 18 ~~~l~~~~~~~~~l~av~d--~~~~~a~~~a~~~~~~--~~----~~~~~~ll~-~~~vD~V~i~tp~~~H~~~~~~al~ 88 (334)
T 3ohs_X 18 TAVLQTLPRSEHQVVAVAA--RDLSRAKEFAQKHDIP--KA----YGSYEELAK-DPNVEVAYVGTQHPQHKAAVMLCLA 88 (334)
T ss_dssp HHHHTTSCTTTEEEEEEEC--SSHHHHHHHHHHHTCS--CE----ESSHHHHHH-CTTCCEEEECCCGGGHHHHHHHHHH
T ss_pred HHHHHhCCCCCeEEEEEEc--CCHHHHHHHHHHcCCC--cc----cCCHHHHhc-CCCCCEEEECCCcHHHHHHHHHHHh
Confidence 334455664 57777765 3467788888988884 22 234455543 125899987766443 456889999
Q ss_pred cCCCeeec
Q psy15362 151 TGTPVVTL 158 (200)
Q Consensus 151 ~G~PVV~~ 158 (200)
+|++|++-
T Consensus 89 ~GkhVl~E 96 (334)
T 3ohs_X 89 AGKAVLCE 96 (334)
T ss_dssp TTCEEEEE
T ss_pred cCCEEEEE
Confidence 99999983
No 104
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=68.05 E-value=27 Score=29.61 Aligned_cols=83 Identities=10% Similarity=-0.011 Sum_probs=53.3
Q ss_pred cHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc-ccEEEeCCCCCCchHHHHHHH-cCCCeeecCCCcchhhh--HH
Q psy15362 94 GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL-ADVCLDTPLCNGHTTSMDVLW-TGTPVVTLPGETLASRV--AA 169 (200)
Q Consensus 94 ~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~-aDv~l~~~~~~~g~~~lEAma-~G~PVV~~~g~~~~~r~--~~ 169 (200)
+...|.+.+++.|+. +|.-..+.+.+.-+-.. +|++=-+|..-.-..+|++++ .|+|||.+.|-.-.+.+ ..
T Consensus 102 ~~~~L~~~~~~~Gi~----~~stpfD~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Av 177 (385)
T 1vli_A 102 WILPLLDYCREKQVI----FLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAW 177 (385)
T ss_dssp GHHHHHHHHHHTTCE----EECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCc----EEEccCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHH
Confidence 456788899999995 66666665444333233 688844554444567888887 79999998875433322 33
Q ss_pred HHHhhcCCCcc
Q psy15362 170 SQLATLGCPEL 180 (200)
Q Consensus 170 ~~~~~~g~~~~ 180 (200)
..+...|.+++
T Consensus 178 e~i~~~Gn~~i 188 (385)
T 1vli_A 178 RTIRAEGNNQI 188 (385)
T ss_dssp HHHHTTTCCCE
T ss_pred HHHHHCCCCcE
Confidence 45556676554
No 105
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=67.56 E-value=2.1 Score=35.19 Aligned_cols=90 Identities=11% Similarity=0.034 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEecc-CCHHHHHhhcccccEEEeCCCCCCchHHH
Q psy15362 68 STLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNV-AAKEEHVRRGQLADVCLDTPLCNGHTTSM 146 (200)
Q Consensus 68 ~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~-~~~~~~~~~~~~aDv~l~~~~~~~g~~~l 146 (200)
.+..|+.-|..-....+++++|......+.+++.++..|...-.=+|+|- +.+.. ...+..=|+++..-+...-..+.
T Consensus 57 ~L~~A~~~i~~i~~~~~ILfVgTk~~aq~~V~k~A~~~g~~yv~~RWlgG~LTN~~-t~~f~~PdlliV~Dp~~e~~AI~ 135 (295)
T 2zkq_b 57 KLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQI-QAAFREPRLLVVTDPRADHQPLT 135 (295)
T ss_dssp HHHHHHHHHHHSSCGGGEEEEECSHHHHHHHHHHHHHHCCEEEESSCCCC-CCCTT-CSSCCCCSEEEESCTTTTHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHHhCCceecceEecccccCcc-cccccCCCeEEEeCCCcchhHHH
Confidence 34444443432123467888886534455677777776642100012332 22211 11245667776555555568899
Q ss_pred HHHHcCCCeeec
Q psy15362 147 DVLWTGTPVVTL 158 (200)
Q Consensus 147 EAma~G~PVV~~ 158 (200)
||...|+|||+.
T Consensus 136 EA~~lgIPvIal 147 (295)
T 2zkq_b 136 EASYVNLPTIAL 147 (295)
T ss_dssp HHHHHTCCEEEE
T ss_pred HHHHhCCCEEEE
Confidence 999999999985
No 106
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=67.51 E-value=14 Score=30.53 Aligned_cols=73 Identities=10% Similarity=0.011 Sum_probs=49.0
Q ss_pred HHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCee
Q psy15362 78 KAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVV 156 (200)
Q Consensus 78 ~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV 156 (200)
++.|+..++-+.+. ..+..++.++++|+. .++ +-+.+++.. -...|+++.+.|... .-.+.+|+.+|++|+
T Consensus 44 ~~~~~~~lvav~d~--~~~~~~~~a~~~g~~-~~~----~~~~~~ll~-~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl 115 (357)
T 3ec7_A 44 NTVSGVEVVAVCDI--VAGRAQAALDKYAIE-AKD----YNDYHDLIN-DKDVEVVIITASNEAHADVAVAALNANKYVF 115 (357)
T ss_dssp HTCTTEEEEEEECS--STTHHHHHHHHHTCC-CEE----ESSHHHHHH-CTTCCEEEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred hhCCCcEEEEEEeC--CHHHHHHHHHHhCCC-Cee----eCCHHHHhc-CCCCCEEEEcCCcHHHHHHHHHHHHCCCCEE
Confidence 36789998877653 346677888888863 222 233455543 125899987766443 456889999999999
Q ss_pred ec
Q psy15362 157 TL 158 (200)
Q Consensus 157 ~~ 158 (200)
+-
T Consensus 116 ~E 117 (357)
T 3ec7_A 116 CE 117 (357)
T ss_dssp EE
T ss_pred ee
Confidence 83
No 107
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=67.01 E-value=29 Score=28.95 Aligned_cols=94 Identities=16% Similarity=0.065 Sum_probs=60.3
Q ss_pred CEEEEEeCC--CCCCCHHHHHHHHHHHHHC----CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhh
Q psy15362 53 AIVYCNFNQ--LYKIDPSTLQMWVNVLKAV----PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRR 126 (200)
Q Consensus 53 ~~v~~~~~r--~~K~~~~~l~a~~~i~~~~----p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~ 126 (200)
++-++.+|- ..+ ..++++.++.... ++++++-+.+ ...++.++.++++|+. ++ +-+.++++.
T Consensus 26 klrvgiIG~G~ig~---~h~~~~~~~~~~~~~~~~~~elvav~d--~~~~~a~~~a~~~~~~--~~----y~d~~~ll~- 93 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQ---AHADAYRRAAMFYPDLPKRPHLYALAD--QDQAMAERHAAKLGAE--KA----YGDWRELVN- 93 (412)
T ss_dssp EEEEEEECCSHHHH---HHHHHHHHHHHHCTTSSSEEEEEEEEC--SSHHHHHHHHHHHTCS--EE----ESSHHHHHH-
T ss_pred cceEEEEcCcHHHH---HHHHHHHhccccccccCCCeEEEEEEc--CCHHHHHHHHHHcCCC--eE----ECCHHHHhc-
Confidence 344555553 332 3455666554433 3568887775 4567888999999984 22 234466653
Q ss_pred cccccEEEeCCCCCC-chHHHHHHHcCCCeeec
Q psy15362 127 GQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 127 ~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~ 158 (200)
=...|+++.+.|... .-.+++|+.+|++|++-
T Consensus 94 ~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~E 126 (412)
T 4gqa_A 94 DPQVDVVDITSPNHLHYTMAMAAIAAGKHVYCE 126 (412)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEECCCcHHHHHHHHHHHHcCCCeEee
Confidence 135788876666443 46799999999999983
No 108
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=66.91 E-value=32 Score=28.00 Aligned_cols=71 Identities=18% Similarity=0.087 Sum_probs=47.7
Q ss_pred HHC-CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCe
Q psy15362 78 KAV-PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPV 155 (200)
Q Consensus 78 ~~~-p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PV 155 (200)
.+. |+..++-+.+ ...+..++.++++|+. . +-+.+++..- ..+|+++.+.|... .-.+.+|+.+|++|
T Consensus 33 ~~~~~~~~lvav~d--~~~~~~~~~~~~~~~~----~---~~~~~~ll~~-~~~D~V~i~tp~~~h~~~~~~al~~gk~v 102 (354)
T 3q2i_A 33 EKHADRAELIDVCD--IDPAALKAAVERTGAR----G---HASLTDMLAQ-TDADIVILTTPSGLHPTQSIECSEAGFHV 102 (354)
T ss_dssp HHTTTTEEEEEEEC--SSHHHHHHHHHHHCCE----E---ESCHHHHHHH-CCCSEEEECSCGGGHHHHHHHHHHTTCEE
T ss_pred HhCCCCeEEEEEEc--CCHHHHHHHHHHcCCc----e---eCCHHHHhcC-CCCCEEEECCCcHHHHHHHHHHHHCCCCE
Confidence 344 7888887765 3457778888887752 2 2344555431 36899987766443 35688999999999
Q ss_pred eec
Q psy15362 156 VTL 158 (200)
Q Consensus 156 V~~ 158 (200)
++-
T Consensus 103 ~~E 105 (354)
T 3q2i_A 103 MTE 105 (354)
T ss_dssp EEC
T ss_pred EEe
Confidence 983
No 109
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=66.82 E-value=8.6 Score=32.23 Aligned_cols=74 Identities=15% Similarity=-0.001 Sum_probs=48.6
Q ss_pred HHCCCcEEEE-EcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc----ccccEEEeCCCCCC-chHHHHHHHc
Q psy15362 78 KAVPNSILWL-LKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG----QLADVCLDTPLCNG-HTTSMDVLWT 151 (200)
Q Consensus 78 ~~~p~~~l~i-vG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~----~~aDv~l~~~~~~~-g~~~lEAma~ 151 (200)
...++..++. +.+ ...++.++.++++|+...++ +-+.+++..-- ...|+++.+.|... .-.+.+|+.+
T Consensus 35 ~~~~~~~lva~v~d--~~~~~a~~~a~~~g~~~~~~----~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~a 108 (398)
T 3dty_A 35 LRDNTFVLVAGAFD--IDPIRGSAFGEQLGVDSERC----YADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEA 108 (398)
T ss_dssp HGGGSEEEEEEECC--SSHHHHHHHHHHTTCCGGGB----CSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHT
T ss_pred hhCCCeEEEEEEeC--CCHHHHHHHHHHhCCCccee----eCCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHC
Confidence 4457777775 554 34677888899999851122 23445655321 13899876665443 4568999999
Q ss_pred CCCeee
Q psy15362 152 GTPVVT 157 (200)
Q Consensus 152 G~PVV~ 157 (200)
|++|++
T Consensus 109 GkhVl~ 114 (398)
T 3dty_A 109 GLHVVC 114 (398)
T ss_dssp TCEEEE
T ss_pred CCeEEE
Confidence 999998
No 110
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=65.57 E-value=34 Score=28.15 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=47.6
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeec
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~ 158 (200)
|++.++-+.+ ...++.++.++++|.. ++ +-+.+++.. -...|+++.+.|... .-.+.+|+.+|++|++-
T Consensus 49 ~~~~lvav~d--~~~~~a~~~a~~~~~~--~~----~~~~~~ll~-~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~E 118 (361)
T 3u3x_A 49 AGARLAGFHE--KDDALAAEFSAVYADA--RR----IATAEEILE-DENIGLIVSAAVSSERAELAIRAMQHGKDVLVD 118 (361)
T ss_dssp TTCEEEEEEC--SCHHHHHHHHHHSSSC--CE----ESCHHHHHT-CTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCcEEEEEEc--CCHHHHHHHHHHcCCC--cc----cCCHHHHhc-CCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEe
Confidence 8899988875 3467788888888753 12 234456543 124899977766433 35588999999999983
No 111
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=63.98 E-value=40 Score=27.34 Aligned_cols=80 Identities=15% Similarity=0.189 Sum_probs=48.0
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHH-HcCCCeeecCCCc-chhh--hHHHH
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL-WTGTPVVTLPGET-LASR--VAASQ 171 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAm-a~G~PVV~~~g~~-~~~r--~~~~~ 171 (200)
..+++.+++.|+. +++-..+.+++..+...+|++=-++..-.-..+++++ ..|+||+...|.. -.+. .....
T Consensus 81 ~~L~~~~~e~Glp----~~Tev~d~~~v~~l~~~vd~lqIgA~~~~n~~LLr~va~~gkPVilK~G~~~t~~ei~~ave~ 156 (285)
T 3sz8_A 81 KIFAEVKARFGVP----VITDVHEAEQAAPVAEIADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFMSPTQLKHVVSK 156 (285)
T ss_dssp HHHHHHHHHHCCC----EEEECCSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHHTSSCEEEECCTTSCGGGTHHHHHH
T ss_pred HHHHHHHHhcCCe----EEEEeCCHHHHHHHHHhCCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 4577888899996 6666665444443445589986665432334455544 5999999998863 2222 23344
Q ss_pred HhhcCCCc
Q psy15362 172 LATLGCPE 179 (200)
Q Consensus 172 ~~~~g~~~ 179 (200)
+...|.++
T Consensus 157 i~~~Gn~~ 164 (285)
T 3sz8_A 157 CGEVGNDR 164 (285)
T ss_dssp HHHTTCCC
T ss_pred HHHcCCCc
Confidence 44556554
No 112
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=63.31 E-value=39 Score=27.06 Aligned_cols=69 Identities=14% Similarity=0.078 Sum_probs=45.2
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeec
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~ 158 (200)
++..++.+.+ ...+..+++++++|+. . + +.+.+++..- ..+|+++.+.|... ...+.+|+..|++|++-
T Consensus 23 ~~~~~vav~d--~~~~~~~~~~~~~g~~-~-~----~~~~~~~l~~-~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~e 92 (332)
T 2glx_A 23 TGGEVVSMMS--TSAERGAAYATENGIG-K-S----VTSVEELVGD-PDVDAVYVSTTNELHREQTLAAIRAGKHVLCE 92 (332)
T ss_dssp TTCEEEEEEC--SCHHHHHHHHHHTTCS-C-C----BSCHHHHHTC-TTCCEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CCCeEEEEEC--CCHHHHHHHHHHcCCC-c-c----cCCHHHHhcC-CCCCEEEEeCChhHhHHHHHHHHHCCCeEEEe
Confidence 7788876664 3456677888887763 1 1 2334554321 24899987776443 45678899999999974
No 113
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=63.13 E-value=23 Score=29.62 Aligned_cols=81 Identities=12% Similarity=0.148 Sum_probs=50.0
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHH-cCCCeeecCCCc-chhhh--HHHH
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW-TGTPVVTLPGET-LASRV--AASQ 171 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma-~G~PVV~~~g~~-~~~r~--~~~~ 171 (200)
..+++.+++.|+. +++-..+...+..+...+|++=-++..-.-..++++++ .|+||+...|.. -.+.+ ....
T Consensus 160 ~~l~~~~~e~Gl~----~~te~~d~~~~~~l~~~vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~ 235 (350)
T 1vr6_A 160 EYLREAADKYGMY----VVTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEY 235 (350)
T ss_dssp HHHHHHHHHHTCE----EEEECSSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCc----EEEEeCCHHHHHHHHHhCCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHH
Confidence 4677888999996 55555554333333344899866665444455677666 899999988865 22222 2333
Q ss_pred HhhcCCCcc
Q psy15362 172 LATLGCPEL 180 (200)
Q Consensus 172 ~~~~g~~~~ 180 (200)
+...|.+++
T Consensus 236 i~~~GN~~v 244 (350)
T 1vr6_A 236 IANSGNTKI 244 (350)
T ss_dssp HHHTTCCCE
T ss_pred HHHCCCCeE
Confidence 445566553
No 114
>3oon_A Outer membrane protein (TPN50); protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG; 1.79A {Borrelia burgdorferi}
Probab=62.68 E-value=28 Score=23.89 Aligned_cols=52 Identities=12% Similarity=0.176 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHCCCcEEEEEcCCcc---cH----------HHHHHHHHHcCCC-CCcEEEeccC
Q psy15362 67 PSTLQMWVNVLKAVPNSILWLLKFPAV---GE----------ANIQATAQALGLD-QHRILFSNVA 118 (200)
Q Consensus 67 ~~~l~a~~~i~~~~p~~~l~ivG~~~~---~~----------~~l~~~~~~~gl~-~~rv~f~g~~ 118 (200)
...++.++.+++..|+.++.|.|+... .. ..++++..+.|+. ++|+...|+-
T Consensus 33 ~~~L~~~a~~l~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~aV~~~L~~~Gv~~~~ri~~~g~G 98 (123)
T 3oon_A 33 YKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSEKRARAIGNYLIKMKVKDKDQILFKGWG 98 (123)
T ss_dssp HHHHHHHHHHHHHSCSCCEEEEECCCSCCCHHHHHHHHHHHHHHHHHHHHHTTSSCGGGEEEEECT
T ss_pred HHHHHHHHHHHHHCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHHHHHHHcCCCchHeEEEEEEc
Confidence 456788888899999999999996321 11 2345566677997 7899998874
No 115
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=62.49 E-value=20 Score=28.75 Aligned_cols=71 Identities=14% Similarity=0.088 Sum_probs=46.0
Q ss_pred HHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCC
Q psy15362 76 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTP 154 (200)
Q Consensus 76 i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~P 154 (200)
.+.+.|+..++.+.+.. .+..+++++++|+. + +-+.+++ -..+|+++.+.|... .-.+.+|+.+|++
T Consensus 24 ~l~~~~~~~lvav~d~~--~~~~~~~~~~~g~~-----~--~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~~ 91 (319)
T 1tlt_A 24 VLAAASDWTLQGAWSPT--RAKALPICESWRIP-----Y--ADSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGVH 91 (319)
T ss_dssp HHHSCSSEEEEEEECSS--CTTHHHHHHHHTCC-----B--CSSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTCE
T ss_pred HHHhCCCeEEEEEECCC--HHHHHHHHHHcCCC-----c--cCcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCCe
Confidence 34456888887555432 34456677777763 1 2233444 357999988776443 4567889999999
Q ss_pred eeec
Q psy15362 155 VVTL 158 (200)
Q Consensus 155 VV~~ 158 (200)
|++-
T Consensus 92 v~~e 95 (319)
T 1tlt_A 92 VCVD 95 (319)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9974
No 116
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=62.10 E-value=31 Score=22.83 Aligned_cols=109 Identities=13% Similarity=0.050 Sum_probs=61.7
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc---------cccEEEeCC--CCCCchHHHHHHH
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ---------LADVCLDTP--LCNGHTTSMDVLW 150 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~---------~aDv~l~~~--~~~~g~~~lEAma 150 (200)
+.+++++.+.......+++.+++.|.. ..|..... .++....+. ..|+++.-. +...|..+++.+.
T Consensus 2 ~~~ilivdd~~~~~~~l~~~L~~~~~~-~~v~~~~~--~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~ 78 (140)
T 1k68_A 2 HKKIFLVEDNKADIRLIQEALANSTVP-HEVVTVRD--GMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIK 78 (140)
T ss_dssp CCEEEEECCCHHHHHHHHHHHHTCSSC-CEEEEECS--HHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEECC--HHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHH
Confidence 356788875433456778888877763 34555443 345544443 478886443 3334677777765
Q ss_pred -----cCCCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHh
Q psy15362 151 -----TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRL 195 (200)
Q Consensus 151 -----~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l 195 (200)
..+|+|...+..-..... -....|..+++.. +.+++.+...++
T Consensus 79 ~~~~~~~~pii~ls~~~~~~~~~--~~~~~g~~~~l~kP~~~~~l~~~i~~~ 128 (140)
T 1k68_A 79 SDPTLKRIPVVVLSTSINEDDIF--HSYDLHVNCYITKSANLSQLFQIVKGI 128 (140)
T ss_dssp HSTTGGGSCEEEEESCCCHHHHH--HHHHTTCSEEEECCSSHHHHHHHHHHH
T ss_pred cCcccccccEEEEecCCcHHHHH--HHHHhchhheecCCCCHHHHHHHHHHH
Confidence 468998764432211111 1224577777663 666666555443
No 117
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=61.42 E-value=58 Score=26.57 Aligned_cols=81 Identities=14% Similarity=0.188 Sum_probs=49.5
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHH-HHHHcCCCeeecCCCc-chhh--hHHHH
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSM-DVLWTGTPVVTLPGET-LASR--VAASQ 171 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~l-EAma~G~PVV~~~g~~-~~~r--~~~~~ 171 (200)
..+++.+++.|+. +++-..+.+++..+...+|++=-++..-.-..++ |+-..|+||+...|-. -.+. .....
T Consensus 102 ~~L~~~~~e~GLp----v~Tev~D~~~v~~l~~~vd~lkIgA~~~~n~~LLr~va~~gkPVilK~Gms~t~~ei~~ave~ 177 (298)
T 3fs2_A 102 EVFSDLKKEYGFP----VLTDIHTEEQCAAVAPVVDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKNVLAK 177 (298)
T ss_dssp HHHHHHHHHHCCC----EEEECCSHHHHHHHTTTCSEEEECGGGTTCHHHHHHHHHTTSEEEEECCTTCCGGGHHHHHHH
T ss_pred HHHHHHHHhcCCe----EEEEeCCHHHHHHHHhhCCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 4567788899996 6666666555554445689986555332223345 4445999999998863 2222 23344
Q ss_pred HhhcCCCcc
Q psy15362 172 LATLGCPEL 180 (200)
Q Consensus 172 ~~~~g~~~~ 180 (200)
+...|.+.+
T Consensus 178 i~~~Gn~~i 186 (298)
T 3fs2_A 178 ITESGNPNV 186 (298)
T ss_dssp HHTTTCCCE
T ss_pred HHHcCCCeE
Confidence 445566553
No 118
>2k1s_A Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, ME palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=61.28 E-value=24 Score=25.26 Aligned_cols=51 Identities=20% Similarity=0.300 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHCCCcEEEEEcCCcc---cH----------HHHHHHHHHcCCCCCcEEEeccC
Q psy15362 68 STLQMWVNVLKAVPNSILWLLKFPAV---GE----------ANIQATAQALGLDQHRILFSNVA 118 (200)
Q Consensus 68 ~~l~a~~~i~~~~p~~~l~ivG~~~~---~~----------~~l~~~~~~~gl~~~rv~f~g~~ 118 (200)
..++.++.+++..|+.++.|.|.... .. ..+++.+.+.|++++|+...|+-
T Consensus 51 ~~L~~ia~~L~~~~~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gv~~~ri~~~g~G 114 (149)
T 2k1s_A 51 NTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLG 114 (149)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEECT
T ss_pred HHHHHHHHHHHhCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEc
Confidence 45677788888999999999996321 10 13444555679987899998873
No 119
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=60.95 E-value=36 Score=27.37 Aligned_cols=80 Identities=11% Similarity=0.111 Sum_probs=48.5
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHH-cCCCeeecCCCc--ch-hhhHHHH
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW-TGTPVVTLPGET--LA-SRVAASQ 171 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma-~G~PVV~~~g~~--~~-~r~~~~~ 171 (200)
+.+++.++++|+. +++-..+......+-..+|++=-++..-.-+.++++++ .|+||+...|.. .. -......
T Consensus 76 ~~l~~~~~~~Gl~----~~te~~d~~~~~~l~~~~d~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~A~~~ 151 (280)
T 2qkf_A 76 KIFEKVKAEFGIP----VITDVHEPHQCQPVAEVCDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEK 151 (280)
T ss_dssp HHHHHHHHHHCCC----EEEECCSGGGHHHHHHHCSEEEECGGGTTBHHHHHHHHHTCCEEEEECCTTSCGGGHHHHHHH
T ss_pred HHHHHHHHHcCCc----EEEecCCHHHHHHHHhhCCEEEECcccccCHHHHHHHHcCCCcEEEECCCCCCHHHHHHHHHH
Confidence 4567778899997 56655554333333234788865553333345777776 899999988853 21 1223455
Q ss_pred HhhcCCCc
Q psy15362 172 LATLGCPE 179 (200)
Q Consensus 172 ~~~~g~~~ 179 (200)
+...|.+.
T Consensus 152 i~~~Gn~~ 159 (280)
T 2qkf_A 152 FHEAGNGK 159 (280)
T ss_dssp HHHTTCCC
T ss_pred HHHcCCCe
Confidence 56667665
No 120
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=60.79 E-value=37 Score=23.22 Aligned_cols=109 Identities=13% Similarity=0.118 Sum_probs=63.9
Q ss_pred cEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc-----------ccccEEEeCC--CCCCchHHHHHH
Q psy15362 83 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG-----------QLADVCLDTP--LCNGHTTSMDVL 149 (200)
Q Consensus 83 ~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~-----------~~aDv~l~~~--~~~~g~~~lEAm 149 (200)
.+++++.+.......+++.+++.|.. .+|...... ++....+ ...|+++.-. +...|..+++.+
T Consensus 5 ~~ILivddd~~~~~~l~~~L~~~g~~-~~v~~~~~~--~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~l 81 (152)
T 3heb_A 5 VTIVMIEDDLGHARLIEKNIRRAGVN-NEIIAFTDG--TSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLV 81 (152)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCC-CCEEEESSH--HHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCCc-ceEEEeCCH--HHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHH
Confidence 57888875433456788888888874 456654432 4444444 3478886443 333477777776
Q ss_pred Hc-----CCCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhh
Q psy15362 150 WT-----GTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG 196 (200)
Q Consensus 150 a~-----G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~ 196 (200)
.. .+|+|...+..-..... -....|..+++.. +.+++.+...++.
T Consensus 82 r~~~~~~~~pii~~t~~~~~~~~~--~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 133 (152)
T 3heb_A 82 KENPHTRRSPVVILTTTDDQREIQ--RCYDLGANVYITKPVNYENFANAIRQLG 133 (152)
T ss_dssp HHSTTTTTSCEEEEESCCCHHHHH--HHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred HhcccccCCCEEEEecCCCHHHHH--HHHHCCCcEEEeCCCCHHHHHHHHHHHH
Confidence 64 78898765433211111 1224577777663 6677766655543
No 121
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=59.90 E-value=39 Score=27.41 Aligned_cols=81 Identities=10% Similarity=0.126 Sum_probs=49.5
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHH-cCCCeeecCCCc--ch-hhhHHHH
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW-TGTPVVTLPGET--LA-SRVAASQ 171 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma-~G~PVV~~~g~~--~~-~r~~~~~ 171 (200)
+.+++.+++.|+. +++-..+..+...+-..+|++=-++..-.-+.++++++ .|+||+...|.. .. -......
T Consensus 79 ~~l~~~~~~~Glp----~~te~~d~~~~~~l~~~vd~~kIgA~~~~n~~Ll~~~a~~~kPV~lk~G~~~t~~ei~~Av~~ 154 (292)
T 1o60_A 79 KIFQELKDTFGVK----IITDVHEIYQCQPVADVVDIIQLPAFLARQTDLVEAMAKTGAVINVKKPQFLSPSQMGNIVEK 154 (292)
T ss_dssp HHHHHHHHHHCCE----EEEECCSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHHTTCEEEEECCTTSCGGGHHHHHHH
T ss_pred HHHHHHHHHcCCc----EEEecCCHHHHHHHHhcCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHH
Confidence 4566778888996 66655554444433356888865553323345777766 899999988853 21 1223455
Q ss_pred HhhcCCCcc
Q psy15362 172 LATLGCPEL 180 (200)
Q Consensus 172 ~~~~g~~~~ 180 (200)
+...|.+.+
T Consensus 155 i~~~Gn~~i 163 (292)
T 1o60_A 155 IEECGNDKI 163 (292)
T ss_dssp HHHTTCCCE
T ss_pred HHHcCCCeE
Confidence 566676653
No 122
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=59.38 E-value=50 Score=26.96 Aligned_cols=106 Identities=15% Similarity=0.094 Sum_probs=64.1
Q ss_pred eeCeeecccccccccCCCCCCCCCCCchh---hhhhhhhcCCCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEE
Q psy15362 11 VNGIVLQNGLATNQTNTKTATGEEVPQSI---VITSRQQYGLPEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWL 87 (200)
Q Consensus 11 ~~gi~i~ng~~~~~~~~~~~~~~~~~~~~---~~~~R~~l~l~~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~i 87 (200)
+.++|+.|+-|.+.+. |.+. ...+++.+|- -+...++++|...- ......+...+.+.+++++.+
T Consensus 116 ~~~vPVINag~g~~~H---------PtQ~LaDl~Ti~e~~g~-l~glkva~vGD~~~--~rva~Sl~~~~~~~~G~~v~~ 183 (306)
T 4ekn_B 116 YSQVPIINAGDGSNQH---------PTQTLLDLYTIMREIGR-IDGIKIAFVGDLKY--GRTVHSLVYALSLFENVEMYF 183 (306)
T ss_dssp HCSSCEEESCSSSSCC---------HHHHHHHHHHHHHHHSC-STTCEEEEESCTTT--CHHHHHHHHHHHTSSSCEEEE
T ss_pred hCCCCEEeCCCCCCcC---------cHHHHHHHHHHHHHhCC-cCCCEEEEEcCCCC--CcHHHHHHHHHHhcCCCEEEE
Confidence 4578999998766543 2211 2456777762 22345566665421 137788888888887899999
Q ss_pred EcCCcc-cHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeC
Q psy15362 88 LKFPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDT 136 (200)
Q Consensus 88 vG~~~~-~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~ 136 (200)
++..+. ..+.+.+.+++.|.. +.+... .......||++...
T Consensus 184 ~~P~~~~~~~~~~~~~~~~g~~---~~~~~d-----~~eav~~aDvvy~~ 225 (306)
T 4ekn_B 184 VSPKELRLPKDIIEDLKAKNIK---FYEKES-----LDDLDDDIDVLYVT 225 (306)
T ss_dssp ECCGGGCCCHHHHHHHHHTTCC---EEEESC-----GGGCCTTCSEEEEC
T ss_pred ECCcccccCHHHHHHHHHcCCE---EEEEcC-----HHHHhcCCCEEEeC
Confidence 985321 135566667776653 544432 23356789988643
No 123
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=59.05 E-value=51 Score=24.28 Aligned_cols=109 Identities=7% Similarity=0.101 Sum_probs=61.2
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc---------------cccEEEeCC--CCCCchH
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ---------------LADVCLDTP--LCNGHTT 144 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~---------------~aDv~l~~~--~~~~g~~ 144 (200)
+.+++++.+.......+++++++.|. ..|..... .++...++. ..|+++.-. +...|..
T Consensus 61 ~~~ILiVdDd~~~~~~l~~~L~~~g~--~~v~~a~~--~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~G~e 136 (206)
T 3mm4_A 61 GKRVLVVDDNFISRKVATGKLKKMGV--SEVEQCDS--GKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMDGYE 136 (206)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTC--SEEEEESS--HHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSCHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCC--CeeeeeCC--HHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCCHHH
Confidence 46788886543345667888888776 23544433 244444443 468885332 3345777
Q ss_pred HHHHHH-------cCCCeeecCCCc-chhhhHHHHHhhcCCCcceecCHHHHHHHHHHhh
Q psy15362 145 SMDVLW-------TGTPVVTLPGET-LASRVAASQLATLGCPELIARTHKEYQDIAIRLG 196 (200)
Q Consensus 145 ~lEAma-------~G~PVV~~~g~~-~~~r~~~~~~~~~g~~~~ia~~~~~yv~~a~~l~ 196 (200)
+++.+. ..+|||...+.. -..... -....|..+++....+++.+...+++
T Consensus 137 l~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~--~~~~~Ga~~~l~KP~~~L~~~i~~~l 194 (206)
T 3mm4_A 137 ATREIRKVEKSYGVRTPIIAVSGHDPGSEEAR--ETIQAGMDAFLDKSLNQLANVIREIE 194 (206)
T ss_dssp HHHHHHHHHHTTTCCCCEEEEESSCCCHHHHH--HHHHHTCSEEEETTCTTHHHHHHHHC
T ss_pred HHHHHHhhhhhcCCCCcEEEEECCCCcHHHHH--HHHhCCCCEEEcCcHHHHHHHHHHHH
Confidence 777664 568999765532 111111 11244777777754445555554444
No 124
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=58.96 E-value=28 Score=29.09 Aligned_cols=64 Identities=11% Similarity=0.034 Sum_probs=44.4
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc-ccEEEeCCCCCCchHHHHHHH-cCCCeeecCCCc
Q psy15362 95 EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL-ADVCLDTPLCNGHTTSMDVLW-TGTPVVTLPGET 162 (200)
Q Consensus 95 ~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~-aDv~l~~~~~~~g~~~lEAma-~G~PVV~~~g~~ 162 (200)
...|.+.+++.|+. +|.-..+.+.+.-+... +|++=-+|..-.-..+|+..+ .|+|||.+.|-.
T Consensus 80 ~~~L~~~~~~~Gi~----~~st~fD~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGms 145 (350)
T 3g8r_A 80 MQKLVAEMKANGFK----AICTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGA 145 (350)
T ss_dssp HHHHHHHHHHTTCE----EEEEECSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTTC
T ss_pred HHHHHHHHHHcCCc----EEeccCCHHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCCC
Confidence 45677889999995 66666654444333344 788855665545567888887 899999988754
No 125
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=58.37 E-value=30 Score=27.50 Aligned_cols=80 Identities=13% Similarity=0.087 Sum_probs=48.3
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHH-cCCCeeecCCCc-chhh--hHHHH
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW-TGTPVVTLPGET-LASR--VAASQ 171 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma-~G~PVV~~~g~~-~~~r--~~~~~ 171 (200)
..+++.+++.|+. +++-..+......+...+|++=-++..-....++++++ .|+||+...|.. -.+. .....
T Consensus 77 ~~l~~~~~~~Gl~----~~te~~d~~~~~~l~~~vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~ 152 (262)
T 1zco_A 77 RWMREAADEYGLV----TVTEVMDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEY 152 (262)
T ss_dssp HHHHHHHHHHTCE----EEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCc----EEEeeCCHHhHHHHHhhCCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHH
Confidence 4677888899996 55555543333333334788865655434455666666 799999988864 2222 23344
Q ss_pred HhhcCCCc
Q psy15362 172 LATLGCPE 179 (200)
Q Consensus 172 ~~~~g~~~ 179 (200)
+...|.+.
T Consensus 153 i~~~Gn~~ 160 (262)
T 1zco_A 153 IMAQGNEN 160 (262)
T ss_dssp HHTTTCCC
T ss_pred HHHCCCCe
Confidence 55556654
No 126
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=58.28 E-value=8 Score=31.43 Aligned_cols=72 Identities=15% Similarity=0.097 Sum_probs=43.3
Q ss_pred HHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCee
Q psy15362 78 KAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVV 156 (200)
Q Consensus 78 ~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV 156 (200)
.+.|+..++-+.+. ..+..+++++++|+. ++ +.+.+++.. -..+|+++.+.|... .-.+.+|+.+|++|+
T Consensus 25 ~~~~~~~~~av~d~--~~~~~~~~a~~~~~~--~~----~~~~~~ll~-~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl 95 (329)
T 3evn_A 25 RLAGNGEVVAVSSR--TLESAQAFANKYHLP--KA----YDKLEDMLA-DESIDVIYVATINQDHYKVAKAALLAGKHVL 95 (329)
T ss_dssp HHHCSEEEEEEECS--CSSTTCC---CCCCS--CE----ESCHHHHHT-CTTCCEEEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred HhCCCcEEEEEEcC--CHHHHHHHHHHcCCC--cc----cCCHHHHhc-CCCCCEEEECCCcHHHHHHHHHHHHCCCeEE
Confidence 34578888877653 234455666666763 11 233455542 126899987766443 456889999999999
Q ss_pred ec
Q psy15362 157 TL 158 (200)
Q Consensus 157 ~~ 158 (200)
+-
T Consensus 96 ~E 97 (329)
T 3evn_A 96 VE 97 (329)
T ss_dssp EE
T ss_pred Ec
Confidence 83
No 127
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=58.01 E-value=36 Score=23.01 Aligned_cols=70 Identities=20% Similarity=0.182 Sum_probs=41.3
Q ss_pred EEEEEcCCccc----HHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHc--CCCeee
Q psy15362 84 ILWLLKFPAVG----EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWT--GTPVVT 157 (200)
Q Consensus 84 ~l~ivG~~~~~----~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~--G~PVV~ 157 (200)
+++++++.|.. -..+++.++++|++ -.|.-.+.-...+ ....+|+++.+........-++..+- ++|||-
T Consensus 5 kIll~Cg~G~sTS~l~~k~~~~~~~~gi~-~~i~a~~~~~~~~---~~~~~Dvil~~pqv~~~~~~~~~~~~~~~v~vI~ 80 (106)
T 1e2b_A 5 HIYLFSSAGMSTSLLVSKMRAQAEKYEVP-VIIEAFPETLAGE---KGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVID 80 (106)
T ss_dssp EEEEECSSSTTTHHHHHHHHHHHHHSCCS-EEEEEECSSSTTH---HHHHCSEEEECTTSGGGHHHHHHHSSSSCCCBCC
T ss_pred EEEEECCCchhHHHHHHHHHHHHHHCCCC-eEEEEecHHHHHh---hccCCCEEEEccchhhhHHHHHHHhcCCCceEEC
Confidence 46666654533 25788899999996 4454444433233 34578999977544434445555543 455543
No 128
>3ldt_A Outer membrane protein, OMPA family protein; OMPA-like domain, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Legionella pneumophila}
Probab=57.96 E-value=27 Score=25.73 Aligned_cols=51 Identities=16% Similarity=0.234 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHCCCcEEEEEcCCc---ccH----------HHHHHHHHHcCCCCCcEEEeccC
Q psy15362 68 STLQMWVNVLKAVPNSILWLLKFPA---VGE----------ANIQATAQALGLDQHRILFSNVA 118 (200)
Q Consensus 68 ~~l~a~~~i~~~~p~~~l~ivG~~~---~~~----------~~l~~~~~~~gl~~~rv~f~g~~ 118 (200)
..++.++.+++++|+.++.|.|+.. ... ..++++..+.|++++|+...|+=
T Consensus 71 ~~L~~la~~l~~~~~~~i~I~GhTD~~G~~~~N~~LS~~RA~aV~~~L~~~Gv~~~ri~~~g~G 134 (169)
T 3ldt_A 71 PGLNNVIRLLNFYPQSTIYVAGFTDNVGSRSHKRKLSQAQAETMMTFLWANGIAAKRLKAEGYG 134 (169)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEECTTSCCC--CHHHHHHHHHHHHHHHHHTTCCTTTEEECCTT
T ss_pred HHHHHHHHHHHhCCCCeEEEEeEeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEC
Confidence 3567778888899999999999631 110 23455666779998999998864
No 129
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=57.54 E-value=43 Score=28.32 Aligned_cols=62 Identities=11% Similarity=0.087 Sum_probs=41.5
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHH-cCCCeeecCCC
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW-TGTPVVTLPGE 161 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma-~G~PVV~~~g~ 161 (200)
..|++.+++.|+. +++-..+...+..+...+|++=.++..-.-..++++.+ .|+||+...|-
T Consensus 196 ~~L~~~~~~~Gl~----~~te~~d~~~~~~l~~~vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~ 258 (385)
T 3nvt_A 196 KILKRVSDEYGLG----VISEIVTPADIEVALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGL 258 (385)
T ss_dssp HHHHHHHHHHTCE----EEEECCSGGGHHHHTTTCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCT
T ss_pred HHHHHHHHHcCCE----EEEecCCHHHHHHHHhhCCEEEECcccccCHHHHHHHHccCCcEEEecCC
Confidence 4667788889996 55555554444444455899866655433456666655 89999998876
No 130
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=55.06 E-value=24 Score=29.98 Aligned_cols=74 Identities=14% Similarity=-0.036 Sum_probs=49.2
Q ss_pred HHC-CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcC---
Q psy15362 78 KAV-PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTG--- 152 (200)
Q Consensus 78 ~~~-p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G--- 152 (200)
.+. |+++++-+.+ ...++.+++++++|+. + +.. +-+.+++.. -...|+++.+.|... .-.+.+|+.+|
T Consensus 44 ~~~~~~~~lvav~d--~~~~~~~~~a~~~g~~-~-~~~--~~~~~~ll~-~~~vD~V~i~tp~~~H~~~~~~al~aG~~~ 116 (438)
T 3btv_A 44 LQLSSQFQITALYS--PKIETSIATIQRLKLS-N-ATA--FPTLESFAS-SSTIDMIVIAIQVASHYEVVMPLLEFSKNN 116 (438)
T ss_dssp HHTTTTEEEEEEEC--SSHHHHHHHHHHTTCT-T-CEE--ESSHHHHHH-CSSCSEEEECSCHHHHHHHHHHHHHHGGGC
T ss_pred HhcCCCeEEEEEEe--CCHHHHHHHHHHcCCC-c-cee--eCCHHHHhc-CCCCCEEEEeCCcHHHHHHHHHHHHCCCCc
Confidence 345 8888887765 3456788888888874 3 222 223455542 125899987766433 35588899999
Q ss_pred ---CCeeec
Q psy15362 153 ---TPVVTL 158 (200)
Q Consensus 153 ---~PVV~~ 158 (200)
++|++-
T Consensus 117 ~~~khVl~E 125 (438)
T 3btv_A 117 PNLKYLFVE 125 (438)
T ss_dssp TTCCEEEEE
T ss_pred ccceeEEec
Confidence 999984
No 131
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=54.92 E-value=49 Score=24.15 Aligned_cols=35 Identities=23% Similarity=0.170 Sum_probs=23.9
Q ss_pred HhhcccccEEEeCCCC--CC-chHHHHHHHcCCCeeec
Q psy15362 124 VRRGQLADVCLDTPLC--NG-HTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 124 ~~~~~~aDv~l~~~~~--~~-g~~~lEAma~G~PVV~~ 158 (200)
..+++.||+++.-... .| +.-+-=|.+.|+||++.
T Consensus 63 ~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~algkPV~~l 100 (152)
T 4fyk_A 63 LNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCL 100 (152)
T ss_dssp HHHHHHCSEEEEECSSCCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHCCEEEEeCCCCCCCHHHHHHHHHHcCCeEEEE
Confidence 3457899999753322 22 33466788999999984
No 132
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=54.71 E-value=24 Score=30.48 Aligned_cols=75 Identities=11% Similarity=-0.031 Sum_probs=50.1
Q ss_pred HHHC-CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcC--
Q psy15362 77 LKAV-PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTG-- 152 (200)
Q Consensus 77 ~~~~-p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G-- 152 (200)
+.+. |++.++-+.+ ...++.+++++++|+. + +.. +-+.+++.. -...|+++.+.|... .-.+.+|+.+|
T Consensus 62 l~~~~~~~~lvav~d--~~~~~a~~~a~~~g~~-~-~~~--~~d~~ell~-~~~vD~V~I~tp~~~H~~~~~~al~aG~~ 134 (479)
T 2nvw_A 62 IQQLSSQFQIVALYN--PTLKSSLQTIEQLQLK-H-ATG--FDSLESFAQ-YKDIDMIVVSVKVPEHYEVVKNILEHSSQ 134 (479)
T ss_dssp HHHTTTTEEEEEEEC--SCHHHHHHHHHHTTCT-T-CEE--ESCHHHHHH-CTTCSEEEECSCHHHHHHHHHHHHHHSSS
T ss_pred HHhcCCCeEEEEEEe--CCHHHHHHHHHHcCCC-c-cee--eCCHHHHhc-CCCCCEEEEcCCcHHHHHHHHHHHHCCCC
Confidence 3455 8898887775 3467788888888884 3 222 233455542 135899987766332 35588899999
Q ss_pred ----CCeeec
Q psy15362 153 ----TPVVTL 158 (200)
Q Consensus 153 ----~PVV~~ 158 (200)
++|++-
T Consensus 135 ~~~~khVl~E 144 (479)
T 2nvw_A 135 NLNLRYLYVE 144 (479)
T ss_dssp CSSCCEEEEE
T ss_pred cCCceeEEEe
Confidence 999983
No 133
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=54.70 E-value=46 Score=22.40 Aligned_cols=110 Identities=10% Similarity=0.089 Sum_probs=62.7
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc--ccccEEEeCC--CCCCchHHHHHHHc-----C
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVCLDTP--LCNGHTTSMDVLWT-----G 152 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~--~~aDv~l~~~--~~~~g~~~lEAma~-----G 152 (200)
..+++++.+.......+++.+++.|.. ..|..... .++....+ ...|+++.-. +...|..+++.+.. .
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~-~~v~~~~~--~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~ 81 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIH-CQLEFVDN--GAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQH 81 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCC-EEEEEESS--HHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTT
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCC-eeEEEECC--HHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccC
Confidence 467888875433456788888887764 33444333 34444443 3368886443 22347778887764 7
Q ss_pred CCeeecCCCcchhhhHHHHHhhcCCCcceec---CHHHHHHHHHHhh
Q psy15362 153 TPVVTLPGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLG 196 (200)
Q Consensus 153 ~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~~l~ 196 (200)
+|+|...+..-...... ....|..+++.. +.+++.+...++.
T Consensus 82 ~pii~~s~~~~~~~~~~--~~~~ga~~~l~Kp~~~~~~l~~~i~~~l 126 (144)
T 3kht_A 82 TPIVILTDNVSDDRAKQ--CMAAGASSVVDKSSNNVTDFYGRIYAIF 126 (144)
T ss_dssp CCEEEEETTCCHHHHHH--HHHTTCSEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHH--HHHcCCCEEEECCCCcHHHHHHHHHHHH
Confidence 89997654322221111 224577777763 5666666555443
No 134
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=53.37 E-value=36 Score=26.77 Aligned_cols=32 Identities=16% Similarity=0.048 Sum_probs=22.0
Q ss_pred cccEEEeCCCCCCchH-HHHHHHcCCCeee-cCC
Q psy15362 129 LADVCLDTPLCNGHTT-SMDVLWTGTPVVT-LPG 160 (200)
Q Consensus 129 ~aDv~l~~~~~~~g~~-~lEAma~G~PVV~-~~g 160 (200)
.+|+.+|-+.-+.... +..++..|+|+|. +.|
T Consensus 45 ~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG 78 (245)
T 1p9l_A 45 NTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG 78 (245)
T ss_dssp TCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred CCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence 6899997654344333 4566889999997 455
No 135
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=53.19 E-value=65 Score=23.69 Aligned_cols=72 Identities=11% Similarity=0.066 Sum_probs=41.9
Q ss_pred EEEEEcCCcccHHHHHHHHHHcCCCCCcEEEecc-CCHHHHHhhccccc---EEEeCCCCC---Cc--hHHHHHHHcCCC
Q psy15362 84 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNV-AAKEEHVRRGQLAD---VCLDTPLCN---GH--TTSMDVLWTGTP 154 (200)
Q Consensus 84 ~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~-~~~~~~~~~~~~aD---v~l~~~~~~---~g--~~~lEAma~G~P 154 (200)
+++|+-..+.....+.+.++++|.. +..+.. .+.+++...+...| +++.+.+.. .+ ..+++++..|+|
T Consensus 2 ~i~iiDn~~s~~~~i~~~l~~~G~~---~~v~~~~~~~~~i~~~l~~~~~~~iil~gGpg~~~~~~~~~~l~~~~~~~~P 78 (192)
T 1i1q_B 2 DILLLDNIDSFTWNLADQLRTNGHN---VVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGVPSEAGCMPELLTRLRGKLP 78 (192)
T ss_dssp EEEEEECSCSSHHHHHHHHHHTTCE---EEEEETTSCSHHHHHHHTTCSSEEEEECCCSSCGGGSTTHHHHHHHHBTTBC
T ss_pred cEEEEECCccHHHHHHHHHHHCCCe---EEEEECCCCHHHHHHHhhhccCCeEEECCCCcCchhCchHHHHHHHHhcCCC
Confidence 4556543223456678888888874 444433 33355544443333 777765432 12 347788888999
Q ss_pred eeec
Q psy15362 155 VVTL 158 (200)
Q Consensus 155 VV~~ 158 (200)
++..
T Consensus 79 ilGI 82 (192)
T 1i1q_B 79 IIGI 82 (192)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9963
No 136
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=53.15 E-value=10 Score=31.26 Aligned_cols=76 Identities=5% Similarity=-0.091 Sum_probs=47.4
Q ss_pred HHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcC
Q psy15362 74 VNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTG 152 (200)
Q Consensus 74 ~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G 152 (200)
.+.+.+.|+..++-+.+ ...+..++++++++.. ++ +-+.+++..- ...|+++.+.|... .-.+.+|+.+|
T Consensus 22 ~~~l~~~~~~~l~av~d--~~~~~~~~~a~~~~~~--~~----~~~~~~ll~~-~~vD~V~i~tp~~~H~~~~~~al~aG 92 (359)
T 3m2t_A 22 LPSLLQMQDIRIVAACD--SDLERARRVHRFISDI--PV----LDNVPAMLNQ-VPLDAVVMAGPPQLHFEMGLLAMSKG 92 (359)
T ss_dssp HHHHHTCTTEEEEEEEC--SSHHHHGGGGGTSCSC--CE----ESSHHHHHHH-SCCSEEEECSCHHHHHHHHHHHHHTT
T ss_pred HHHHHhCCCcEEEEEEc--CCHHHHHHHHHhcCCC--cc----cCCHHHHhcC-CCCCEEEEcCCcHHHHHHHHHHHHCC
Confidence 33445678999887765 3456666666665432 12 2334555431 24598877766332 34588999999
Q ss_pred CCeeec
Q psy15362 153 TPVVTL 158 (200)
Q Consensus 153 ~PVV~~ 158 (200)
++|++-
T Consensus 93 khVl~E 98 (359)
T 3m2t_A 93 VNVFVE 98 (359)
T ss_dssp CEEEEC
T ss_pred CeEEEE
Confidence 999983
No 137
>3u80_A 3-dehydroquinate dehydratase, type II; structural genomics, center for structural genomics of infec diseases, csgid, unknown function; 1.60A {Bifidobacterium longum} SCOP: c.23.13.0
Probab=52.73 E-value=38 Score=24.83 Aligned_cols=59 Identities=15% Similarity=0.138 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc----cc-EEEeCCCCC-CchHHHHHH----HcCCCeee
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL----AD-VCLDTPLCN-GHTTSMDVL----WTGTPVVT 157 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~----aD-v~l~~~~~~-~g~~~lEAm----a~G~PVV~ 157 (200)
+.+++.+.++|++ +.|.-.=...++..+++. +| +.++|--|+ -+..+.+|+ +.++|+|=
T Consensus 36 ~~l~~~a~~~g~~---v~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~l~~~~~P~VE 104 (151)
T 3u80_A 36 KLCAEWGKDLGLE---VEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLME 104 (151)
T ss_dssp HHHHHHHHHTTEE---EEEEECSCHHHHHHHHHHHHHHTCCEEEECTTCCSCCHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCE---EEEEecCCHHHHHHHHHHhhhcCcEEEECcchhhhhhHHHHHHHHHHhhcCCCEEE
Confidence 3456667777775 555333223455555443 34 668887776 478899994 35999994
No 138
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=52.50 E-value=49 Score=22.11 Aligned_cols=109 Identities=6% Similarity=0.019 Sum_probs=62.8
Q ss_pred CcEEEEEcCCcccHHHHHHHHHH-cCCCCCcEEEeccCCHHHHHhhccc---ccEEEeCCCCC---CchHHHHHHHc---
Q psy15362 82 NSILWLLKFPAVGEANIQATAQA-LGLDQHRILFSNVAAKEEHVRRGQL---ADVCLDTPLCN---GHTTSMDVLWT--- 151 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~-~gl~~~rv~f~g~~~~~~~~~~~~~---aDv~l~~~~~~---~g~~~lEAma~--- 151 (200)
..+++++.+.......++..+++ .|.. |... -+.++....+.. .|+++.-.... .|..+++.+..
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~~~~---v~~~--~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~ 78 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIGEYD---FIEV--ENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSR 78 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHCCCE---EEEE--CSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGG
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhccCcc---EEEE--CCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcc
Confidence 35788887543345677788877 6764 4432 233566655544 78886544333 36666666554
Q ss_pred --CCCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhhc
Q psy15362 152 --GTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT 197 (200)
Q Consensus 152 --G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~~ 197 (200)
.+|||...+..-..... -....|..+++.. +.+++.+...++.+
T Consensus 79 ~~~~~ii~ls~~~~~~~~~--~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 126 (140)
T 3lua_A 79 TANTPVIIATKSDNPGYRH--AALKFKVSDYILKPYPTKRLENSVRSVLK 126 (140)
T ss_dssp GTTCCEEEEESCCCHHHHH--HHHHSCCSEEEESSCCTTHHHHHHHHHHC
T ss_pred cCCCCEEEEeCCCCHHHHH--HHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 89999765433222111 1224577777763 66677766655543
No 139
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=52.47 E-value=48 Score=21.92 Aligned_cols=110 Identities=13% Similarity=0.047 Sum_probs=62.4
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc---ccccEEEeCC--CCCCchHHHHHHHc-----
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG---QLADVCLDTP--LCNGHTTSMDVLWT----- 151 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~---~~aDv~l~~~--~~~~g~~~lEAma~----- 151 (200)
..+++++.+.......+++..++.|.. .+..... ..+....+ ...|+++.-. |...|..+++.+..
T Consensus 5 ~~~iLivdd~~~~~~~l~~~L~~~g~~--~v~~~~~--~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~ 80 (129)
T 3h1g_A 5 SMKLLVVDDSSTMRRIIKNTLSRLGYE--DVLEAEH--GVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFK 80 (129)
T ss_dssp -CCEEEECSCHHHHHHHHHHHHHTTCC--CEEEESS--HHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCT
T ss_pred CcEEEEEeCCHHHHHHHHHHHHHcCCc--EEEEeCC--HHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCC
Confidence 356888875433456788888887763 3443322 23332222 2478886432 43457888887763
Q ss_pred CCCeeecCCCcchhhhHHHHHhhcCCCccee--cCHHHHHHHHHHhhc
Q psy15362 152 GTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGT 197 (200)
Q Consensus 152 G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia--~~~~~yv~~a~~l~~ 197 (200)
.+|||...+..-..... -....|..+++. -+.+++.+...++.+
T Consensus 81 ~~pii~~s~~~~~~~~~--~~~~~g~~~~l~KP~~~~~L~~~l~~~l~ 126 (129)
T 3h1g_A 81 EIPIIMITAEGGKAEVI--TALKAGVNNYIVKPFTPQVLKEKLEVVLG 126 (129)
T ss_dssp TCCEEEEESCCSHHHHH--HHHHHTCCEEEESCCCHHHHHHHHHHHHC
T ss_pred CCeEEEEeCCCChHHHH--HHHHcCccEEEeCCCCHHHHHHHHHHHhc
Confidence 67998765432211111 122457888776 377787777666554
No 140
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=51.80 E-value=52 Score=22.16 Aligned_cols=108 Identities=19% Similarity=0.166 Sum_probs=60.7
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc--cccEEE-eCC-CCCCchHHHHHHHc-----
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCL-DTP-LCNGHTTSMDVLWT----- 151 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~--~aDv~l-~~~-~~~~g~~~lEAma~----- 151 (200)
...+++++.+.......+++.+.+.|.. |.... +.++....+. ..|+++ +.. +...|..+++.+..
T Consensus 7 ~~~~iLivd~~~~~~~~l~~~L~~~g~~---v~~~~--~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~ 81 (147)
T 2zay_A 7 KWWRIMLVDTQLPALAASISALSQEGFD---IIQCG--NAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTA 81 (147)
T ss_dssp -CEEEEEECTTGGGGHHHHHHHHHHTEE---EEEES--SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTT
T ss_pred CCceEEEEeCCHHHHHHHHHHHHHcCCe---EEEeC--CHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccC
Confidence 3577888876444567788888877763 44333 2344444332 468885 332 33347778887764
Q ss_pred CCCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHh
Q psy15362 152 GTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRL 195 (200)
Q Consensus 152 G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l 195 (200)
.+|||...+..-..... -....|..+++.. +.+++.....++
T Consensus 82 ~~pii~ls~~~~~~~~~--~~~~~g~~~~l~kp~~~~~L~~~i~~~ 125 (147)
T 2zay_A 82 SIPVIALSGRATAKEEA--QLLDMGFIDFIAKPVNAIRLSARIKRV 125 (147)
T ss_dssp TSCEEEEESSCCHHHHH--HHHHHTCSEEEESSCCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHH--HHHhCCCCEEEeCCCCHHHHHHHHHHH
Confidence 78998764432211111 1124577777663 566666555443
No 141
>3lzd_A DPH2; diphthamide biosynthesis, radical SAM enzyme, gene triplicat iron-sulfur cluster, biosynthetic protein; 2.10A {Pyrococcus horikoshii} PDB: 3lzc_A
Probab=51.74 E-value=7.9 Score=32.84 Aligned_cols=80 Identities=14% Similarity=0.089 Sum_probs=52.7
Q ss_pred HHHHHHHC-CCcEEEEEcCCc-cc----HHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCC-CCCCchHH
Q psy15362 73 WVNVLKAV-PNSILWLLKFPA-VG----EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTS 145 (200)
Q Consensus 73 ~~~i~~~~-p~~~l~ivG~~~-~~----~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~-~~~~g~~~ 145 (200)
+..|.+.. .+..=+++|.-+ .. .+.|++++++.|.. -.++.+|.+..+.+..+ . .|+||... | -+++
T Consensus 255 ~~~I~kA~dA~~~GIIvgTLg~Q~~~~~~~~L~~ll~~~Gkk-~y~i~vg~inp~KLanF-~-iD~fV~vaCP---rlsi 328 (378)
T 3lzd_A 255 WAQIAKAMDAKKFGVIVSIKKGQLRLAEAKRIVKLLKKHGRE-ARLIVMNDVNYHKLEGF-P-FEAYVVVACP---RVPL 328 (378)
T ss_dssp HHHHHHHTTCCEEEEEEECSTTTCCHHHHHHHHHHHHHTTCE-EEEEEESSCCHHHHTTS-C-CSEEEECSCT---HHHH
T ss_pred HHHHHHHhcCCEEEEEEeCCccCCCHHHHHHHHHHHHHcCCc-EEEEEeCCCCHHHHhCC-C-CCEEEEecCC---Cccc
Confidence 44444332 344456777522 11 25788999999997 88888999998777654 4 99998653 3 1455
Q ss_pred HHHHHcCCCeeec
Q psy15362 146 MDVLWTGTPVVTL 158 (200)
Q Consensus 146 lEAma~G~PVV~~ 158 (200)
.+.-..-+||+|.
T Consensus 329 dd~~~F~KPvLTP 341 (378)
T 3lzd_A 329 DDYGAWRKPVLTP 341 (378)
T ss_dssp SCCSCCSSCEECH
T ss_pred cchhhCCCcccCH
Confidence 5556677787774
No 142
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=51.47 E-value=53 Score=26.57 Aligned_cols=79 Identities=15% Similarity=0.137 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc-ccccEEEeCCCCCC-chHHH
Q psy15362 69 TLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG-QLADVCLDTPLCNG-HTTSM 146 (200)
Q Consensus 69 ~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~-~~aDv~l~~~~~~~-g~~~l 146 (200)
-+.++++++.+. ..++...- .... +...+..++.|+. ++.|+-+ ++ +. ..+|+++.++-..- --.+.
T Consensus 16 Gms~~A~~L~~~-G~~V~~~D-~~~~-~~~~~~L~~~gi~----v~~g~~~-~~---l~~~~~d~vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 16 FMGGLAAIAKEA-GFEVSGCD-AKMY-PPMSTQLEALGID----VYEGFDA-AQ---LDEFKADVYVIGNVAKRGMDVVE 84 (326)
T ss_dssp HHHHHHHHHHHT-TCEEEEEE-SSCC-TTHHHHHHHTTCE----EEESCCG-GG---GGSCCCSEEEECTTCCTTCHHHH
T ss_pred HHHHHHHHHHhC-CCEEEEEc-CCCC-cHHHHHHHhCCCE----EECCCCH-HH---cCCCCCCEEEECCCcCCCCHHHH
Confidence 345566666554 35544432 2221 1233344556775 4567543 22 22 36899987653322 23467
Q ss_pred HHHHcCCCeeec
Q psy15362 147 DVLWTGTPVVTL 158 (200)
Q Consensus 147 EAma~G~PVV~~ 158 (200)
+|...|+||++.
T Consensus 85 ~a~~~gi~v~~~ 96 (326)
T 3eag_A 85 AILNLGLPYISG 96 (326)
T ss_dssp HHHHTTCCEEEH
T ss_pred HHHHcCCcEEeH
Confidence 788889988863
No 143
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=51.18 E-value=39 Score=27.67 Aligned_cols=73 Identities=16% Similarity=0.057 Sum_probs=46.3
Q ss_pred HHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCC
Q psy15362 75 NVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGT 153 (200)
Q Consensus 75 ~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~ 153 (200)
+.+.+.|+..++-+.+. ..+..+ .+++.|+. .+-+.+++.. -...|+++.+.|... .-.+.+|+.+|+
T Consensus 22 ~~l~~~~~~~l~av~d~--~~~~~~-~a~~~g~~-------~~~~~~~ll~-~~~~D~V~i~tp~~~h~~~~~~al~aGk 90 (359)
T 3e18_A 22 TLASAADNLEVHGVFDI--LAEKRE-AAAQKGLK-------IYESYEAVLA-DEKVDAVLIATPNDSHKELAISALEAGK 90 (359)
T ss_dssp HHHHTSTTEEEEEEECS--SHHHHH-HHHTTTCC-------BCSCHHHHHH-CTTCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred HHHHhCCCcEEEEEEcC--CHHHHH-HHHhcCCc-------eeCCHHHHhc-CCCCCEEEEcCCcHHHHHHHHHHHHCCC
Confidence 34556788998877653 234443 45666653 1334455543 136899987776443 456889999999
Q ss_pred Ceeec
Q psy15362 154 PVVTL 158 (200)
Q Consensus 154 PVV~~ 158 (200)
+|++-
T Consensus 91 hVl~E 95 (359)
T 3e18_A 91 HVVCE 95 (359)
T ss_dssp EEEEE
T ss_pred CEEee
Confidence 99983
No 144
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=50.24 E-value=12 Score=30.41 Aligned_cols=39 Identities=8% Similarity=-0.144 Sum_probs=25.6
Q ss_pred HHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeee-cCC
Q psy15362 122 EHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVT-LPG 160 (200)
Q Consensus 122 ~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~-~~g 160 (200)
++..++..+|+.+|-++-.. --.+..++..|+|+|+ +.|
T Consensus 81 dl~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 81 DPESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp CHHHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCC
T ss_pred CHHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 34445568999998653222 2235678889999997 444
No 145
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=50.18 E-value=24 Score=28.28 Aligned_cols=68 Identities=6% Similarity=0.033 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCC--------------HHHHHhhcccccEEE
Q psy15362 69 TLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA--------------KEEHVRRGQLADVCL 134 (200)
Q Consensus 69 ~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~--------------~~~~~~~~~~aDv~l 134 (200)
+++++.+......+.+.+++|.++..+.... ...+.|. .+|++..+.+ .++....+..+|+++
T Consensus 104 ~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~-~L~~~G~--~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVI 180 (277)
T 3don_A 104 YVNGLKQIYEGIEDAYILILGAGGASKGIAN-ELYKIVR--PTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIII 180 (277)
T ss_dssp HHHHHHHHSTTGGGCCEEEECCSHHHHHHHH-HHHTTCC--SCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEE
T ss_pred HHHHHHHhCCCcCCCEEEEECCcHHHHHHHH-HHHHCCC--CEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEE
Confidence 4455443211223567889997544444344 4445676 3566665542 345555677899999
Q ss_pred eCCCC
Q psy15362 135 DTPLC 139 (200)
Q Consensus 135 ~~~~~ 139 (200)
.+.|.
T Consensus 181 naTp~ 185 (277)
T 3don_A 181 NTTPA 185 (277)
T ss_dssp ECCC-
T ss_pred ECccC
Confidence 87653
No 146
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=50.03 E-value=70 Score=23.14 Aligned_cols=95 Identities=20% Similarity=0.244 Sum_probs=54.1
Q ss_pred HHHHHHHHHcCCCCCcEEEec-cCCHHHHHhhc--ccccEEEeCCCCCCc----hHHHHHHH-cC---CCeeecCCCcch
Q psy15362 96 ANIQATAQALGLDQHRILFSN-VAAKEEHVRRG--QLADVCLDTPLCNGH----TTSMDVLW-TG---TPVVTLPGETLA 164 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g-~~~~~~~~~~~--~~aDv~l~~~~~~~g----~~~lEAma-~G---~PVV~~~g~~~~ 164 (200)
..+..+++..|.+ |+.+| .+|.+++.... ..+|++..++..+.. ..+++++. .| +||+.- |....
T Consensus 36 ~~va~~l~~~G~e---Vi~lG~~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vG-G~~~~ 111 (161)
T 2yxb_A 36 KVVARALRDAGFE---VVYTGLRQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLG-GTIPI 111 (161)
T ss_dssp HHHHHHHHHTTCE---EECCCSBCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEE-ECCCH
T ss_pred HHHHHHHHHCCCE---EEECCCCCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEe-CCCch
Confidence 4556677777876 78787 47777776654 357888766544332 23555553 33 555542 33222
Q ss_pred hhhHHHHHhhcCCCcceecC--HHHHHHHHHHhh
Q psy15362 165 SRVAASQLATLGCPELIART--HKEYQDIAIRLG 196 (200)
Q Consensus 165 ~r~~~~~~~~~g~~~~ia~~--~~~yv~~a~~l~ 196 (200)
.+. ..++..|.+.++..+ .++-++.+.++.
T Consensus 112 ~~~--~~l~~~G~d~v~~~~~~~~~~~~~~~~~~ 143 (161)
T 2yxb_A 112 PDL--EPLRSLGIREIFLPGTSLGEIIEKVRKLA 143 (161)
T ss_dssp HHH--HHHHHTTCCEEECTTCCHHHHHHHHHHHH
T ss_pred hcH--HHHHHCCCcEEECCCCCHHHHHHHHHHHH
Confidence 222 236678998756543 345666665554
No 147
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=48.50 E-value=93 Score=25.38 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=62.4
Q ss_pred CeeecccccccccCCCCCCCCCCCchh---hhhhhhhcCCCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEc
Q psy15362 13 GIVLQNGLATNQTNTKTATGEEVPQSI---VITSRQQYGLPEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLK 89 (200)
Q Consensus 13 gi~i~ng~~~~~~~~~~~~~~~~~~~~---~~~~R~~l~l~~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG 89 (200)
++|+.|+-+-+.+. |.+. ...+++.+|- -+...++.+|...- ....+.+...+.+.|++.+.+++
T Consensus 121 ~vPVINag~G~~~H---------PtQaLaDl~Ti~e~~g~-l~gl~va~vGD~~~--~rva~Sl~~~~~~~~g~~v~~~~ 188 (310)
T 3csu_A 121 NVPVLNAGDGSNQH---------PTQTLLDLFTIQETQGR-LDNLHVAMVGDLKY--GRTVHSLTQALAKFDGNRFYFIA 188 (310)
T ss_dssp TCCEEEEEETTSCC---------HHHHHHHHHHHHHHHSC-SSSCEEEEESCTTT--CHHHHHHHHHHHTSSSCEEEEEC
T ss_pred CCCEEcCccCCCCC---------chHHHHHHHHHHHHhCC-cCCcEEEEECCCCC--CchHHHHHHHHHhCCCCEEEEEC
Confidence 78999998855432 2221 2456777762 13355666775421 24678888888888889999998
Q ss_pred CCcc-cHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeC
Q psy15362 90 FPAV-GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDT 136 (200)
Q Consensus 90 ~~~~-~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~ 136 (200)
..+. ..+.+.+.+++.|.. +.+... .......||++...
T Consensus 189 P~~~~~~~~~~~~~~~~g~~---~~~~~d-----~~eav~~aDvvyt~ 228 (310)
T 3csu_A 189 PDALAMPQYILDMLDEKGIA---WSLHSS-----IEEVMAEVDILYMT 228 (310)
T ss_dssp CGGGCCCHHHHHHHHHTTCC---EEECSC-----GGGTTTTCSEEEEC
T ss_pred CcccccCHHHHHHHHHcCCe---EEEEcC-----HHHHhcCCCEEEEC
Confidence 5331 124566667776653 444432 22345678887543
No 148
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=48.18 E-value=63 Score=25.29 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=23.4
Q ss_pred cccEEEeCCCCCCchHHHHHHHcCCCeeecC
Q psy15362 129 LADVCLDTPLCNGHTTSMDVLWTGTPVVTLP 159 (200)
Q Consensus 129 ~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~ 159 (200)
.=|+++..-+......+.||...|+|||+..
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaiv 187 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLI 187 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEe
Confidence 3567765555455688999999999999864
No 149
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=47.94 E-value=48 Score=25.85 Aligned_cols=61 Identities=20% Similarity=0.083 Sum_probs=33.7
Q ss_pred HHHHHHHHcCCCCCcEEEe-ccCCHHHHHhhcccccEEEeCCCCCCchH--HHHHHHcCCCeeec
Q psy15362 97 NIQATAQALGLDQHRILFS-NVAAKEEHVRRGQLADVCLDTPLCNGHTT--SMDVLWTGTPVVTL 158 (200)
Q Consensus 97 ~l~~~~~~~gl~~~rv~f~-g~~~~~~~~~~~~~aDv~l~~~~~~~g~~--~lEAma~G~PVV~~ 158 (200)
.+.+.+++..-. -+|... ..+..+....++..+|+++++...-.... .-.+...|+|.|..
T Consensus 86 ~~~~~l~~~np~-~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 86 VSQQRLTQLNPD-IQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITA 149 (251)
T ss_dssp HHHHHHHHHCTT-SEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCC-CEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 344555554332 234433 33455566677788999998764211111 22234579999964
No 150
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=47.81 E-value=68 Score=22.36 Aligned_cols=110 Identities=10% Similarity=0.039 Sum_probs=66.4
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc--ccccEEEeCC--CCCCchHHHHHHH-----c
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVCLDTP--LCNGHTTSMDVLW-----T 151 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~--~~aDv~l~~~--~~~~g~~~lEAma-----~ 151 (200)
.+.|+++|-+....+..+++..++.|.. .|.... +..+-..++ ...|+.+.=. |.-.|..+++.+- .
T Consensus 11 k~~rILiVDD~~~~r~~l~~~L~~~G~~--~v~~a~--~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~ 86 (134)
T 3to5_A 11 KNMKILIVDDFSTMRRIVKNLLRDLGFN--NTQEAD--DGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELK 86 (134)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTTCC--CEEEES--SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTT
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCc--EEEEEC--CHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCC
Confidence 4678999865433456778888888874 343322 223333332 3468886433 4445888888874 5
Q ss_pred CCCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhh
Q psy15362 152 GTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG 196 (200)
Q Consensus 152 G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~ 196 (200)
.+|||...+....+.... ....|..+++.. +.+++.+...++.
T Consensus 87 ~ipvI~lTa~~~~~~~~~--~~~~Ga~~yl~KP~~~~~L~~~i~~~l 131 (134)
T 3to5_A 87 HLPVLMITAEAKREQIIE--AAQAGVNGYIVKPFTAATLKEKLDKIF 131 (134)
T ss_dssp TCCEEEEESSCCHHHHHH--HHHTTCCEEEESSCCHHHHHHHHHHHC
T ss_pred CCeEEEEECCCCHHHHHH--HHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence 789997554332222111 225688888774 7788877776654
No 151
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=47.68 E-value=30 Score=28.94 Aligned_cols=64 Identities=11% Similarity=0.165 Sum_probs=42.9
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc-ccEEEeCCCCCCchHHHHHHH-cCCCeeecCCCc
Q psy15362 95 EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL-ADVCLDTPLCNGHTTSMDVLW-TGTPVVTLPGET 162 (200)
Q Consensus 95 ~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~-aDv~l~~~~~~~g~~~lEAma-~G~PVV~~~g~~ 162 (200)
...|.+.+++.|+. +|.-..+.+.+.-+-.. +|++=-+|..-.-..+|++++ .|+|||.+.|-.
T Consensus 93 ~~~L~~~~~~~Gi~----~~st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGma 158 (349)
T 2wqp_A 93 EIKLKEYVESKGMI----FISTLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMN 158 (349)
T ss_dssp HHHHHHHHHHTTCE----EEEEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTC
T ss_pred HHHHHHHHHHhCCe----EEEeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCC
Confidence 35677889999995 66666654444333232 688844554444567888887 799999988754
No 152
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=47.46 E-value=52 Score=22.16 Aligned_cols=54 Identities=13% Similarity=0.098 Sum_probs=35.0
Q ss_pred CcEEEEEcCCccc-----HHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCC
Q psy15362 82 NSILWLLKFPAVG-----EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL 138 (200)
Q Consensus 82 ~~~l~ivG~~~~~-----~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~ 138 (200)
-.+.+++++.|.. ...+++.+++.|++ + +. ....+..++...+..+|+++.+.+
T Consensus 18 ~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~-~-~~-i~~~~~~~~~~~~~~~DlIi~t~~ 76 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIKMKVENALRQLGVS-D-IE-SASCSVGEAKGLASNYDIVVASNH 76 (110)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCC-C-EE-EEEECHHHHHHHGGGCSEEEEETT
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHHHHHcCCC-e-EE-EEEeeHHHHhhccCCCcEEEECCc
Confidence 3567777765532 34778889998884 3 21 333444566655678999998765
No 153
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=46.84 E-value=52 Score=20.73 Aligned_cols=104 Identities=14% Similarity=0.122 Sum_probs=55.3
Q ss_pred cEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc--cccEEE-eCC-CCCCchHHHHHHH-----cCC
Q psy15362 83 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCL-DTP-LCNGHTTSMDVLW-----TGT 153 (200)
Q Consensus 83 ~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~--~aDv~l-~~~-~~~~g~~~lEAma-----~G~ 153 (200)
.+++++.+.......+++.+++.|.. |.... +.++....+. ..|+++ +.. +...|..+++.+. ..+
T Consensus 2 ~~iliv~~~~~~~~~l~~~l~~~g~~---v~~~~--~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~ 76 (119)
T 2j48_A 2 GHILLLEEEDEAATVVCEMLTAAGFK---VIWLV--DGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHP 76 (119)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCE---EEEES--CHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSC
T ss_pred CEEEEEeCCHHHHHHHHHHHHhCCcE---EEEec--CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCC
Confidence 46777765333356677777776763 44433 3344433332 367775 432 2234677777775 578
Q ss_pred CeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhh
Q psy15362 154 PVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG 196 (200)
Q Consensus 154 PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~ 196 (200)
|+|...+..-.. .....|..+++.. +.+++.....++.
T Consensus 77 ~ii~~~~~~~~~-----~~~~~g~~~~l~kp~~~~~l~~~l~~~~ 116 (119)
T 2j48_A 77 PLVLFLGEPPVD-----PLLTAQASAILSKPLDPQLLLTTLQGLC 116 (119)
T ss_dssp CCEEEESSCCSS-----HHHHHHCSEECSSCSTTHHHHHHHHTTC
T ss_pred CEEEEeCCCCch-----hhhhcCHHHhccCCCCHHHHHHHHHHHh
Confidence 998754322111 1223466665553 5566665554443
No 154
>3cyp_B Chemotaxis protein MOTB; bacterial flagellar motor, peptidoglycan binding, bacterial flagellum, flagellar rotation, inner membrane, membrane; 1.60A {Helicobacter pylori} PDB: 3cyq_B* 3imp_B
Probab=46.83 E-value=39 Score=23.83 Aligned_cols=51 Identities=10% Similarity=0.216 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHCC-CcEEEEEcCCc---c----c--H--------HHHHHHHHHcCCCCCcEEEeccC
Q psy15362 68 STLQMWVNVLKAVP-NSILWLLKFPA---V----G--E--------ANIQATAQALGLDQHRILFSNVA 118 (200)
Q Consensus 68 ~~l~a~~~i~~~~p-~~~l~ivG~~~---~----~--~--------~~l~~~~~~~gl~~~rv~f~g~~ 118 (200)
..|+.++.+++..| +.++.|.|... . . . ..+++.+.+.|++++|+...|+-
T Consensus 21 ~~L~~ia~~l~~~p~~~~i~I~GhtD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv~~~ri~~~g~G 89 (138)
T 3cyp_B 21 LYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYG 89 (138)
T ss_dssp HHHHHHHHHHTTSCTTCEEEEEEECCCCCC----CCSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECT
T ss_pred HHHHHHHHHHHhCCCCcEEEEEEecCCCCcccccchhHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEC
Confidence 45677788888899 89999999621 1 1 1 12445555669987899988864
No 155
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=46.79 E-value=63 Score=21.71 Aligned_cols=110 Identities=10% Similarity=0.082 Sum_probs=56.6
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcC-CCCCcEEEeccCCHHHHHhhc---ccccEEEeCCCCC--CchHHHHHHH---cC
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALG-LDQHRILFSNVAAKEEHVRRG---QLADVCLDTPLCN--GHTTSMDVLW---TG 152 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~g-l~~~rv~f~g~~~~~~~~~~~---~~aDv~l~~~~~~--~g~~~lEAma---~G 152 (200)
..+++++.+.......+++.+++.| .. |...... .+.+..+. ...|+++.-.... .|..+++.+. ..
T Consensus 20 ~~~ilivdd~~~~~~~l~~~L~~~g~~~---v~~~~~~-~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~ 95 (146)
T 4dad_A 20 MINILVASEDASRLAHLARLVGDAGRYR---VTRTVGR-AAQIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLHPG 95 (146)
T ss_dssp GCEEEEECSCHHHHHHHHHHHHHHCSCE---EEEECCC-HHHHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHCTT
T ss_pred CCeEEEEeCCHHHHHHHHHHHhhCCCeE---EEEeCCH-HHHHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhCCC
Confidence 4577777653333456777777766 42 3332211 23333332 3568875433222 2556666554 37
Q ss_pred CCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhhc
Q psy15362 153 TPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT 197 (200)
Q Consensus 153 ~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~~ 197 (200)
+|||...+..-...... ....|..+++.. +.+++.....++++
T Consensus 96 ~~ii~lt~~~~~~~~~~--~~~~ga~~~l~Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 96 LTCLLVTTDASSQTLLD--AMRAGVRDVLRWPLEPRALDDALKRAAA 140 (146)
T ss_dssp CEEEEEESCCCHHHHHH--HHTTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCHHHHHH--HHHhCCceeEcCCCCHHHHHHHHHHHHh
Confidence 88887654322111111 124466666653 66777766655543
No 156
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=46.51 E-value=87 Score=24.97 Aligned_cols=81 Identities=15% Similarity=0.164 Sum_probs=48.7
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHH-cCCCeeecCCCc--ch-hhhHHHH
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLW-TGTPVVTLPGET--LA-SRVAASQ 171 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma-~G~PVV~~~g~~--~~-~r~~~~~ 171 (200)
..+++..++.|+. +++-..+..+...+...+|++=-++..-.-+.++++++ .|+||+...|.. .. -......
T Consensus 65 ~~l~~~~~e~Glp----~~te~~d~~~~~~l~~~vd~~~IgA~~~rn~~ll~~~a~~~~PV~lK~G~~~t~~e~~~Av~~ 140 (267)
T 2nwr_A 65 KALRKVKEEFGLK----ITTDIHESWQAEPVAEVADIIQIPAFLCRQTDLLLAAAKTGRAVNVKKGQFLAPWDTKNVVEK 140 (267)
T ss_dssp HHHHHHHHHHCCE----EEEECSSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHTTTSEEEEECCTTCCGGGGHHHHHH
T ss_pred HHHHHHHHhcCCe----EEEecCCHHhHHHHHhcCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHH
Confidence 3566777888996 55655554444333345888865553222344666665 799999988852 21 2223455
Q ss_pred HhhcCCCcc
Q psy15362 172 LATLGCPEL 180 (200)
Q Consensus 172 ~~~~g~~~~ 180 (200)
+...|.+++
T Consensus 141 i~~~GN~~i 149 (267)
T 2nwr_A 141 LKFGGAKEI 149 (267)
T ss_dssp HHHTTCSSE
T ss_pred HHHcCCCeE
Confidence 666677653
No 157
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=45.74 E-value=49 Score=27.62 Aligned_cols=69 Identities=22% Similarity=0.237 Sum_probs=44.6
Q ss_pred HHCC-CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCC--Cc---hHHHHHHHc
Q psy15362 78 KAVP-NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCN--GH---TTSMDVLWT 151 (200)
Q Consensus 78 ~~~p-~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~--~g---~~~lEAma~ 151 (200)
.+.| +..|+-+.+. ..++.+++++++|+. .|. +.++ ++...|+.+...|-. ++ -...+||.+
T Consensus 26 ~~~~~~~elvav~~~--~~~~a~~~a~~~gv~----~~~---~~~~---l~~~~D~v~i~~p~~~h~~~~~~~a~~al~a 93 (372)
T 4gmf_A 26 MQPPEGLELVGLLAQ--GSARSRELAHAFGIP----LYT---SPEQ---ITGMPDIACIVVRSTVAGGAGTQLARHFLAR 93 (372)
T ss_dssp SSCCTTEEEEEEECC--SSHHHHHHHHHTTCC----EES---SGGG---CCSCCSEEEECCC--CTTSHHHHHHHHHHHT
T ss_pred HhCCCCeEEEEEECC--CHHHHHHHHHHhCCC----EEC---CHHH---HhcCCCEEEEECCCcccchhHHHHHHHHHHc
Confidence 3455 5788766653 457788999999984 332 3344 445788875443322 22 348899999
Q ss_pred CCCeeec
Q psy15362 152 GTPVVTL 158 (200)
Q Consensus 152 G~PVV~~ 158 (200)
|++|++-
T Consensus 94 GkhVl~E 100 (372)
T 4gmf_A 94 GVHVIQE 100 (372)
T ss_dssp TCEEEEE
T ss_pred CCcEEEe
Confidence 9999983
No 158
>1r1m_A Outer membrane protein class 4; 1.90A {Neisseria meningitidis} SCOP: d.79.7.1
Probab=45.71 E-value=50 Score=24.18 Aligned_cols=51 Identities=10% Similarity=0.059 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHCCCcEEEEEcCCc---ccH----------HHHHHHHHHcCCCCCcEEEeccC
Q psy15362 68 STLQMWVNVLKAVPNSILWLLKFPA---VGE----------ANIQATAQALGLDQHRILFSNVA 118 (200)
Q Consensus 68 ~~l~a~~~i~~~~p~~~l~ivG~~~---~~~----------~~l~~~~~~~gl~~~rv~f~g~~ 118 (200)
..|+.++.+++..|+.++.|.|... ... ..+++++.+.|++++|+...|+=
T Consensus 32 ~~L~~la~~L~~~~~~~I~I~GhTD~~G~~~~N~~LS~~RA~aV~~~L~~~Gi~~~ri~~~G~G 95 (164)
T 1r1m_A 32 DNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSRISAVGLG 95 (164)
T ss_dssp HHHHHHHHHHTTSCEEEEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECT
T ss_pred HHHHHHHHHHHhCCCcEEEEEEEeCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEC
Confidence 4567777778888888999999632 110 13455566679988899988874
No 159
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=45.57 E-value=35 Score=27.31 Aligned_cols=48 Identities=13% Similarity=0.050 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCC
Q psy15362 69 TLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA 119 (200)
Q Consensus 69 ~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~ 119 (200)
+++++.+......+.+.+++|.++..+.....++ +.|. .+|++..+.+
T Consensus 114 ~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~-~~G~--~~v~i~~R~~ 161 (283)
T 3jyo_A 114 FGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALV-THGV--QKLQVADLDT 161 (283)
T ss_dssp HHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHH-HTTC--SEEEEECSSH
T ss_pred HHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHH-HCCC--CEEEEEECCH
Confidence 4444433222234667888886544444344444 4566 4577766643
No 160
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=45.44 E-value=65 Score=21.46 Aligned_cols=109 Identities=10% Similarity=0.036 Sum_probs=61.6
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc------------ccccEEEeCC--CCCCchHHHH
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG------------QLADVCLDTP--LCNGHTTSMD 147 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~------------~~aDv~l~~~--~~~~g~~~lE 147 (200)
..+++++.+.......+++.+++.|.. ..|...... ++....+ ...|+++.-. +...|..+++
T Consensus 6 ~~~iLivdd~~~~~~~l~~~L~~~g~~-~~v~~~~~~--~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~ 82 (149)
T 1k66_A 6 TQPLLVVEDSDEDFSTFQRLLQREGVV-NPIYRCITG--DQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQ 82 (149)
T ss_dssp TSCEEEECCCHHHHHHHHHHHHHTTBC-SCEEEECSH--HHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECCH--HHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHH
Confidence 456778865433456778888887763 356554433 4444443 3468886433 3234677777
Q ss_pred HHH-----cCCCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHh
Q psy15362 148 VLW-----TGTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRL 195 (200)
Q Consensus 148 Ama-----~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l 195 (200)
.+. ..+|+|...+..-..... -....|..+++.. +.+++.+...++
T Consensus 83 ~l~~~~~~~~~~ii~~t~~~~~~~~~--~~~~~g~~~~l~kP~~~~~l~~~i~~~ 135 (149)
T 1k66_A 83 EIKQDEVLKKIPVVIMTTSSNPKDIE--ICYSYSISSYIVKPLEIDRLTETVQTF 135 (149)
T ss_dssp HHTTSTTGGGSCEEEEESCCCHHHHH--HHHHTTCSEEEECCSSHHHHHHHHHHH
T ss_pred HHHhCcccCCCeEEEEeCCCCHHHHH--HHHHCCCCEEEeCCCCHHHHHHHHHHH
Confidence 775 468888764432211111 1224577777663 666666555443
No 161
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=45.27 E-value=9.8 Score=30.61 Aligned_cols=37 Identities=24% Similarity=0.166 Sum_probs=24.7
Q ss_pred HhhcccccEEEeCCCCCC-chHHHHHHHcCCCeee-cCC
Q psy15362 124 VRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVT-LPG 160 (200)
Q Consensus 124 ~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~-~~g 160 (200)
..++..+|++++.++-+. -..+..++..|+|+|+ +.|
T Consensus 68 ~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 68 ERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTG 106 (272)
T ss_dssp HHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCC
T ss_pred HHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 334458999998654222 2346678999999997 444
No 162
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=44.91 E-value=61 Score=20.95 Aligned_cols=81 Identities=10% Similarity=0.024 Sum_probs=45.6
Q ss_pred HHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCc-hHHHHHHHcC
Q psy15362 74 VNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGH-TTSMDVLWTG 152 (200)
Q Consensus 74 ~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g-~~~lEAma~G 152 (200)
.+.+.+....+++++.. ..+.++.+. +.++. +........+++...+..+|+++.+.+.... ...-.+...|
T Consensus 21 ~~~l~~~g~~~v~~~~r---~~~~~~~~~-~~~~~---~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g 93 (118)
T 3ic5_A 21 AALLKTSSNYSVTVADH---DLAALAVLN-RMGVA---TKQVDAKDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAG 93 (118)
T ss_dssp HHHHHHCSSEEEEEEES---CHHHHHHHH-TTTCE---EEECCTTCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTT
T ss_pred HHHHHhCCCceEEEEeC---CHHHHHHHH-hCCCc---EEEecCCCHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhC
Confidence 33333444356666543 234444433 33442 3333344456777778899999988765443 3345556688
Q ss_pred CCeeecCCC
Q psy15362 153 TPVVTLPGE 161 (200)
Q Consensus 153 ~PVV~~~g~ 161 (200)
++.+-..++
T Consensus 94 ~~~~~~~~~ 102 (118)
T 3ic5_A 94 AHYFDLTED 102 (118)
T ss_dssp CEEECCCSC
T ss_pred CCEEEecCc
Confidence 888765443
No 163
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=44.62 E-value=54 Score=25.52 Aligned_cols=74 Identities=11% Similarity=0.100 Sum_probs=39.2
Q ss_pred CcEEEEEcC---CcccHHHHHHHHHHcCCCCCcEEEeccC-----CHHHHH---------hhcccc-cEEEeCCCCCCch
Q psy15362 82 NSILWLLKF---PAVGEANIQATAQALGLDQHRILFSNVA-----AKEEHV---------RRGQLA-DVCLDTPLCNGHT 143 (200)
Q Consensus 82 ~~~l~ivG~---~~~~~~~l~~~~~~~gl~~~rv~f~g~~-----~~~~~~---------~~~~~a-Dv~l~~~~~~~g~ 143 (200)
+..+.+.|. ....+.+|++++++.|= +|.=-|+. +..... .-.... ...|.+.......
T Consensus 5 g~~F~ls~~~~~~~~~k~~L~~~I~~~GG---~v~~~g~~~lf~~~~~~~~~~~~~~k~~~~~~~~~~t~lia~~~~rt~ 81 (241)
T 2vxb_A 5 DCVFAFSGPVHEDAYDRSALETVVQDHGG---LVLDTGLRPLFNDPFKSKQKKLRHLKPQKRSKSWNQAFVVSDTFSRKV 81 (241)
T ss_dssp TEEEEECCCSSTTSSCHHHHHHHHHHTTC---EECTTCSGGGBCCSCC----CCCSCCBCGGGGGCSEEEEECSSCCCCH
T ss_pred CcEEEEecCCCCchhhHHHHHHHHHHCCC---EEecCcchhhccCccccccccccccccccccccccceEEEcCCCCCcH
Confidence 456677665 22457889999999873 22111110 100000 000011 1333333333457
Q ss_pred HHHHHHHcCCCeeec
Q psy15362 144 TSMDVLWTGTPVVTL 158 (200)
Q Consensus 144 ~~lEAma~G~PVV~~ 158 (200)
..+.|++.|+|||..
T Consensus 82 K~~~ala~gipiV~~ 96 (241)
T 2vxb_A 82 KYLEALAFNIPCVHP 96 (241)
T ss_dssp HHHHHHHHTCCEECT
T ss_pred HHHHHHHcCCCEecH
Confidence 799999999999985
No 164
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=44.46 E-value=20 Score=27.32 Aligned_cols=69 Identities=22% Similarity=0.114 Sum_probs=39.9
Q ss_pred hcccccEEEeCCCCCCc--hHHHHHHHcCCCeeecCCCcchh-hhH----HH-HHhhcCCCc-ceecCHHHHHHHHHHh
Q psy15362 126 RGQLADVCLDTPLCNGH--TTSMDVLWTGTPVVTLPGETLAS-RVA----AS-QLATLGCPE-LIARTHKEYQDIAIRL 195 (200)
Q Consensus 126 ~~~~aDv~l~~~~~~~g--~~~lEAma~G~PVV~~~g~~~~~-r~~----~~-~~~~~g~~~-~ia~~~~~yv~~a~~l 195 (200)
+...+|.||.- |=+.| ..+.||+..++||+..++..+-. .+. .+ ++..--... .+++|.++.++...++
T Consensus 115 m~~~sda~Ivl-pGG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~~l~~~ 192 (195)
T 1rcu_A 115 LLRNADVVVSI-GGEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQIIEQI 192 (195)
T ss_dssp HHTTCSEEEEE-SCCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHHHHHTC
T ss_pred HHHhCCEEEEe-cCCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCCHHHHHHHHHHH
Confidence 45678888642 21124 36999999999999987654311 111 00 111111112 4568999988876554
No 165
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=43.68 E-value=38 Score=29.27 Aligned_cols=79 Identities=14% Similarity=0.123 Sum_probs=48.4
Q ss_pred HHHHCCCcEEEEEcCCcccHHHHHHHHHHc-CCCCCcEEE----------------eccCCHHHHHhhcccccEEEeCCC
Q psy15362 76 VLKAVPNSILWLLKFPAVGEANIQATAQAL-GLDQHRILF----------------SNVAAKEEHVRRGQLADVCLDTPL 138 (200)
Q Consensus 76 i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~-gl~~~rv~f----------------~g~~~~~~~~~~~~~aDv~l~~~~ 138 (200)
.+.+.|+++++-+.+. ..++.++.++++ |.. ..+.. .-+-+.+++.. -...|+++...+
T Consensus 41 ~l~~~~~veLvAV~D~--~~era~~~a~~~yG~~-~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL~-d~dIDaVviaTp 116 (446)
T 3upl_A 41 QVARMQGIEVGALSAR--RLPNTFKAIRTAYGDE-ENAREATTESAMTRAIEAGKIAVTDDNDLILS-NPLIDVIIDATG 116 (446)
T ss_dssp HHTTSSSEEEEEEECS--STHHHHHHHHHHHSSS-TTEEECSSHHHHHHHHHTTCEEEESCHHHHHT-CTTCCEEEECSC
T ss_pred HHhhCCCcEEEEEEeC--CHHHHHHHHHHhcCCc-cccccccchhhhhhhhccCCceEECCHHHHhc-CCCCCEEEEcCC
Confidence 3455899999999863 346677777665 621 22211 11223345442 125899987654
Q ss_pred C-C-CchHHHHHHHcCCCeeec
Q psy15362 139 C-N-GHTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 139 ~-~-~g~~~lEAma~G~PVV~~ 158 (200)
. . .--..++|+.+|+.|++.
T Consensus 117 ~p~~H~e~a~~AL~AGKHVv~~ 138 (446)
T 3upl_A 117 IPEVGAETGIAAIRNGKHLVMM 138 (446)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEC
T ss_pred ChHHHHHHHHHHHHcCCcEEec
Confidence 3 2 234689999999999974
No 166
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=43.37 E-value=55 Score=26.43 Aligned_cols=65 Identities=8% Similarity=0.005 Sum_probs=40.0
Q ss_pred CCCEEEEEeCCCCCC-C--HHHHH--------HHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEecc
Q psy15362 51 EDAIVYCNFNQLYKI-D--PSTLQ--------MWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNV 117 (200)
Q Consensus 51 ~~~~v~~~~~r~~K~-~--~~~l~--------a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~ 117 (200)
.-.+++...|.++|- . ++++. ...++.+..|++.++++.. |-.-.---..+..|+.++||+..|-
T Consensus 69 ~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN--Pvd~~t~i~~k~sg~p~~rvig~gT 144 (294)
T 2x0j_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN--PMDVMTYIMWKESGKPRNEVFGMGN 144 (294)
T ss_dssp TCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS--SHHHHHHHHHHHSSCCTTSEEECCH
T ss_pred CCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC--cchhhHHhhHHHcCCChhhEEEeee
Confidence 445777777776652 1 23332 3345667789999999974 4322222344556887789998864
No 167
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=43.28 E-value=75 Score=21.55 Aligned_cols=109 Identities=14% Similarity=0.112 Sum_probs=59.0
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc---------cccEEEeCC--CCCCchHHHHHH
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ---------LADVCLDTP--LCNGHTTSMDVL 149 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~---------~aDv~l~~~--~~~~g~~~lEAm 149 (200)
+..+++++.+.......++..+++.|.. ..|... -+..+...++. ..|+++.-. +...|..+++.+
T Consensus 7 ~~~~ILivdd~~~~~~~l~~~L~~~~~~-~~v~~~--~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l 83 (149)
T 1i3c_A 7 PPKVILLVEDSKADSRLVQEVLKTSTID-HELIIL--RDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEI 83 (149)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHSCCSC-EEEEEE--CSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHH
T ss_pred CCCeEEEEECCHHHHHHHHHHHHhcCCC-ccEEEe--CCHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHH
Confidence 3467888865323345677777766653 234333 23345444443 468886433 333477777777
Q ss_pred Hc-----CCCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHH
Q psy15362 150 WT-----GTPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIR 194 (200)
Q Consensus 150 a~-----G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~ 194 (200)
.. .+|||...+..-...... ....|..+++.. +.+++.+...+
T Consensus 84 ~~~~~~~~~piiils~~~~~~~~~~--~~~~ga~~~l~KP~~~~~L~~~i~~ 133 (149)
T 1i3c_A 84 KQNPDLKRIPVVVLTTSHNEDDVIA--SYELHVNCYLTKSRNLKDLFKMVQG 133 (149)
T ss_dssp HHCTTTTTSCEEEEESCCCHHHHHH--HHHTTCSEEEECCSSHHHHHHHHHH
T ss_pred HhCcCcCCCeEEEEECCCChHHHHH--HHHcCCcEEEECCCCHHHHHHHHHH
Confidence 53 578887544322111111 124577777763 56666655444
No 168
>4erh_A Outer membrane protein A; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.52A {Salmonella enterica subsp}
Probab=43.19 E-value=54 Score=23.18 Aligned_cols=50 Identities=12% Similarity=0.184 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHC--CCcEEEEEcCCc---cc----------HHHHHHHHHHcCCCCCcEEEecc
Q psy15362 68 STLQMWVNVLKAV--PNSILWLLKFPA---VG----------EANIQATAQALGLDQHRILFSNV 117 (200)
Q Consensus 68 ~~l~a~~~i~~~~--p~~~l~ivG~~~---~~----------~~~l~~~~~~~gl~~~rv~f~g~ 117 (200)
..|+.++..++.. |+.++.|.|+.. .. ...+++++.+.|+..+|+...|+
T Consensus 39 ~~L~~~a~~l~~~~~~~~~i~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gv~~~ri~~~g~ 103 (148)
T 4erh_A 39 QALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISARGM 103 (148)
T ss_dssp HHHHHHHHHHTCCCTTTCEEEEEEECCTTCTTCSSSSHHHHHHHHHHHHHHTTTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCcEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE
Confidence 4566667777777 789999999631 10 12455666677998889988775
No 169
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=42.93 E-value=71 Score=23.28 Aligned_cols=59 Identities=20% Similarity=0.218 Sum_probs=37.9
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc-----cc-EEEeCCCCCC-chHHHHHHH-cCCCeee
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL-----AD-VCLDTPLCNG-HTTSMDVLW-TGTPVVT 157 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~-----aD-v~l~~~~~~~-g~~~lEAma-~G~PVV~ 157 (200)
+.+++.++++|++ +.|.-.=...++..+++. .| +.++|--|+- +..+.+|++ .++|+|=
T Consensus 31 ~~l~~~a~~~g~~---v~~~QSN~EgeLId~Ih~a~~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~VE 97 (149)
T 2uyg_A 31 ALCEAWGAELGLG---VVFRQTNYEGQLIEWVQQAHQEGFLAIVLNPGALTHYSYALLDAIRAQPLPVVE 97 (149)
T ss_dssp HHHHHHHHHTTCC---EEEEECSCHHHHHHHHHHTTTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCEEE
T ss_pred HHHHHHHHHcCCE---EEEEeeCCHHHHHHHHHHhccCCeeEEEEccchhccccHHHHHHHHhCCCCEEE
Confidence 4566777788875 555433333455555433 34 5578866653 688999987 7999994
No 170
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=42.66 E-value=1e+02 Score=25.27 Aligned_cols=83 Identities=12% Similarity=0.025 Sum_probs=46.5
Q ss_pred HHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHH-----------HHHhhcccccEEEeCCCCCC
Q psy15362 73 WVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKE-----------EHVRRGQLADVCLDTPLCNG 141 (200)
Q Consensus 73 ~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~-----------~~~~~~~~aDv~l~~~~~~~ 141 (200)
+.+++.+.|+..++-+.+.. ......+++..|+. .+.+..+.+ +...+...+|+++++.+...
T Consensus 16 ~~r~L~~~p~~elvav~d~~--~~~~~~~a~~~g~~----~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~ 89 (340)
T 1b7g_O 16 VADAIIKQPDMKLVGVAKTS--PNYEAFIAHRRGIR----IYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVVDTTPNGV 89 (340)
T ss_dssp HHHHHHTCTTEEEEEEECSS--CSHHHHHHHHTTCC----EECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEEECCSTTH
T ss_pred HHHHHHcCCCCEEEEEEcCC--hHHHHHHHHhcCcc----eecCcCHHHHhcccccccccCHhHhhcCCCEEEECCCCch
Confidence 34445578999988887532 23344555555553 333322211 11122346899998876443
Q ss_pred chH-HHHHHHcCCCeeecCCC
Q psy15362 142 HTT-SMDVLWTGTPVVTLPGE 161 (200)
Q Consensus 142 g~~-~lEAma~G~PVV~~~g~ 161 (200)
... .-.++..|+++|...++
T Consensus 90 s~~~a~~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 90 GAQYKPIYLQLQRNAIFQGGE 110 (340)
T ss_dssp HHHHHHHHHHTTCEEEECTTS
T ss_pred hHHHHHHHHHcCCeEEEeCCC
Confidence 333 33455789999986554
No 171
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=41.70 E-value=1.3e+02 Score=25.36 Aligned_cols=29 Identities=21% Similarity=0.428 Sum_probs=22.1
Q ss_pred ccEEEeCCC-CCCchHHHHHHHcCCCeeec
Q psy15362 130 ADVCLDTPL-CNGHTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 130 aDv~l~~~~-~~~g~~~lEAma~G~PVV~~ 158 (200)
+|+++...+ ..|-..+++|+.+|+.|++.
T Consensus 94 iDvVV~ai~G~aGl~ptlaAi~aGK~VvlA 123 (388)
T 1r0k_A 94 ADWTMAAIIGCAGLKATLAAIRKGKTVALA 123 (388)
T ss_dssp CSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHCCCEEEEe
Confidence 799998753 22224589999999999985
No 172
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=41.65 E-value=41 Score=27.36 Aligned_cols=73 Identities=8% Similarity=-0.016 Sum_probs=45.2
Q ss_pred HHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCC
Q psy15362 76 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTP 154 (200)
Q Consensus 76 i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~P 154 (200)
.+++.|+.+++-+.+.. ..+++++++++. + +... -+.+++.. -...|+++.+.|... .-.+.+|+.+|++
T Consensus 21 ~l~~~~~~~l~av~d~~----~~~~~a~~~~~~-~-~~~~--~~~~~ll~-~~~~D~V~i~tp~~~h~~~~~~al~aGk~ 91 (349)
T 3i23_A 21 YVMIRETLEVKTIFDLH----VNEKAAAPFKEK-G-VNFT--ADLNELLT-DPEIELITICTPAHTHYDLAKQAILAGKS 91 (349)
T ss_dssp HHTTCTTEEEEEEECTT----CCHHHHHHHHTT-T-CEEE--SCTHHHHS-CTTCCEEEECSCGGGHHHHHHHHHHTTCE
T ss_pred HHhhCCCeEEEEEECCC----HHHHHHHhhCCC-C-CeEE--CCHHHHhc-CCCCCEEEEeCCcHHHHHHHHHHHHcCCE
Confidence 34457899998777532 234455554442 2 2222 23356653 124899987766443 4568899999999
Q ss_pred eee
Q psy15362 155 VVT 157 (200)
Q Consensus 155 VV~ 157 (200)
|++
T Consensus 92 Vl~ 94 (349)
T 3i23_A 92 VIV 94 (349)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 173
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=41.50 E-value=28 Score=25.61 Aligned_cols=37 Identities=11% Similarity=-0.092 Sum_probs=23.9
Q ss_pred HhhcccccEEE---eCCC--CCCchH---HHHHHHcCCCeeecCC
Q psy15362 124 VRRGQLADVCL---DTPL--CNGHTT---SMDVLWTGTPVVTLPG 160 (200)
Q Consensus 124 ~~~~~~aDv~l---~~~~--~~~g~~---~lEAma~G~PVV~~~g 160 (200)
...+..||++| +||. ....-| +-=|.|.|+|||+...
T Consensus 62 ~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~~ 106 (161)
T 2f62_A 62 IQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFTS 106 (161)
T ss_dssp HHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEEc
Confidence 45678999996 3432 112123 5558899999998643
No 174
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=41.48 E-value=1e+02 Score=22.55 Aligned_cols=104 Identities=11% Similarity=-0.002 Sum_probs=54.8
Q ss_pred EEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc--cccEEEeCCCCCCchHHHHHHHc---CCCeeec
Q psy15362 84 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCLDTPLCNGHTTSMDVLWT---GTPVVTL 158 (200)
Q Consensus 84 ~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~--~aDv~l~~~~~~~g~~~lEAma~---G~PVV~~ 158 (200)
+++++.+.......++..+.+.|.. |.... +.++....+. ..|+++ .+...|..+++.+.. .+|||..
T Consensus 2 ~ilivdd~~~~~~~l~~~L~~~g~~---v~~~~--~~~~al~~l~~~~~dlvi--lp~~~g~~~~~~lr~~~~~~~ii~l 74 (223)
T 2hqr_A 2 RVLLIEKNSVLGGEIEKGLNVKGFM---ADVTE--SLEDGEYLMDIRNYDLVM--VSDKNALSFVSRIKEKHSSIVVLVS 74 (223)
T ss_dssp CEEEECSCHHHHHHHHHHHGGGTCC---EEEES--SHHHHHHHHTTSCCSEEE--ECCTTHHHHHHHHHHHCTTSEEEEE
T ss_pred EEEEEcCCHHHHHHHHHHHHHCCcE---EEEEC--CHHHHHHHHhcCCCCEEE--eCCCCHHHHHHHHHhCCCCCcEEEE
Confidence 4566654323345666777666664 44322 2344444332 468888 444456666666543 7888875
Q ss_pred CCCcchhhhHHHHHhhcCCCcceec---CHHHHHHHHHHhh
Q psy15362 159 PGETLASRVAASQLATLGCPELIAR---THKEYQDIAIRLG 196 (200)
Q Consensus 159 ~g~~~~~r~~~~~~~~~g~~~~ia~---~~~~yv~~a~~l~ 196 (200)
.+..-...... ....|..+++.. +.+++.+...++.
T Consensus 75 t~~~~~~~~~~--~~~~Ga~~~l~Kp~~~~~~L~~~i~~~~ 113 (223)
T 2hqr_A 75 SDNPTSEEEVH--AFEQGADDYIAKPYRSIKALVARIEARL 113 (223)
T ss_dssp ESSCCHHHHHH--HHHHTCSEEEETTCSCTHHHHHHHHHHT
T ss_pred ECCCCHHHHHH--HHHcCCCEEEECCCCCHHHHHHHHHHHh
Confidence 44322111111 123477776653 5666666655544
No 175
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=41.48 E-value=75 Score=21.06 Aligned_cols=110 Identities=6% Similarity=-0.036 Sum_probs=61.8
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc--ccccEEEeCC--CCCCchHHHHHHHc-----
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVCLDTP--LCNGHTTSMDVLWT----- 151 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~--~~aDv~l~~~--~~~~g~~~lEAma~----- 151 (200)
+..+++++.+.......+++.+++.|.. |.... +.++....+ ...|+++.-. +...|..+++.+..
T Consensus 5 ~~~~iLivdd~~~~~~~l~~~l~~~g~~---v~~~~--~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ 79 (140)
T 3grc_A 5 PRPRILICEDDPDIARLLNLMLEKGGFD---SDMVH--SAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTR 79 (140)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHHTTCE---EEEEC--SHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGT
T ss_pred CCCCEEEEcCCHHHHHHHHHHHHHCCCe---EEEEC--CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccC
Confidence 3467888875433456777888887763 44433 224444333 3468886443 33347778877664
Q ss_pred CCCeeecCCCcchhhhHHHHHhhcCCCccee--cCHHHHHHHHHHhh
Q psy15362 152 GTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLG 196 (200)
Q Consensus 152 G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia--~~~~~yv~~a~~l~ 196 (200)
.+|+|...+..-..... ......|..+++. -+.+++.....+++
T Consensus 80 ~~~ii~~s~~~~~~~~~-~~~~~~g~~~~l~kP~~~~~l~~~i~~~l 125 (140)
T 3grc_A 80 DLAIVVVSANAREGELE-FNSQPLAVSTWLEKPIDENLLILSLHRAI 125 (140)
T ss_dssp TCEEEEECTTHHHHHHH-HCCTTTCCCEEECSSCCHHHHHHHHHHHH
T ss_pred CCCEEEEecCCChHHHH-HHhhhcCCCEEEeCCCCHHHHHHHHHHHH
Confidence 78999866542111110 0112346666665 36777776665554
No 176
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=40.94 E-value=84 Score=27.36 Aligned_cols=94 Identities=15% Similarity=0.063 Sum_probs=53.9
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCC---------HHHHHhhccc---ccEEEeCC--CCCC-chHHHHHH-HcCCCeeec-
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAA---------KEEHVRRGQL---ADVCLDTP--LCNG-HTTSMDVL-WTGTPVVTL- 158 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~---------~~~~~~~~~~---aDv~l~~~--~~~~-g~~~lEAm-a~G~PVV~~- 158 (200)
..+-.++.+.|+.-.+++=+|..+ ..|+..++.. .++.+.-. ..++ .-..+++. +.++|||+.
T Consensus 126 ~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~dv~~~D~l~~l~~Dp~T~~I~ly~E~~~e~~~~~f~~~ar~~~KPVV~~k 205 (480)
T 3dmy_A 126 QELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALF 205 (480)
T ss_dssp HHHHHHHHHTTCCEEEEEECCTTTTSTTTTTHHHHHHHHHHHTCTTCCEEEEEESCCCHHHHHHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHHcCCCceEEEEcCCCccccccCCCCHHHHHHHHhcCCCCCEEEEEEecCCcHHHHHHHHHHHhCCCCEEEEE
Confidence 456667777777556777777763 4566665532 34433111 1111 13356654 689999986
Q ss_pred CCCcchhhhHHHHHhhcCCCcceecCHHHHHHHHHHhhc
Q psy15362 159 PGETLASRVAASQLATLGCPELIARTHKEYQDIAIRLGT 197 (200)
Q Consensus 159 ~g~~~~~r~~~~~~~~~g~~~~ia~~~~~yv~~a~~l~~ 197 (200)
.|.+..+ ++..|+ +.+++.+++.+.+..|+.
T Consensus 206 ~Grs~~g------~r~~Gv--irv~~~~el~~~a~~l~~ 236 (480)
T 3dmy_A 206 LGYTPAV------ARDENV--WFASSLDEAARLACLLSR 236 (480)
T ss_dssp TTCCCSS------SEETTE--EEESSHHHHHHHHHHHHH
T ss_pred eCCCCcc------cccCCE--EEECCHHHHHHHHHHHhc
Confidence 4543322 222232 567889998888877654
No 177
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=40.67 E-value=1e+02 Score=26.45 Aligned_cols=76 Identities=21% Similarity=0.028 Sum_probs=45.3
Q ss_pred HHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCe
Q psy15362 77 LKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPV 155 (200)
Q Consensus 77 ~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PV 155 (200)
+.+.++.++.+++. ..+..++++++.++. ++-....+.+++..+++.+|+++++.+... ......++..|+.+
T Consensus 42 L~~~~g~~V~v~~R---~~~ka~~la~~~~~~---~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~~v 115 (467)
T 2axq_A 42 LAANDDINVTVACR---TLANAQALAKPSGSK---AISLDVTDDSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKTDV 115 (467)
T ss_dssp HHTSTTEEEEEEES---SHHHHHHHHGGGTCE---EEECCTTCHHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTCEE
T ss_pred HHhCCCCeEEEEEC---CHHHHHHHHHhcCCc---EEEEecCCHHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCCEE
Confidence 34455677766653 245566666543331 222333344566677788999998876542 23345667788888
Q ss_pred eec
Q psy15362 156 VTL 158 (200)
Q Consensus 156 V~~ 158 (200)
+..
T Consensus 116 vd~ 118 (467)
T 2axq_A 116 VTS 118 (467)
T ss_dssp EEC
T ss_pred EEe
Confidence 864
No 178
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=40.18 E-value=96 Score=25.92 Aligned_cols=85 Identities=18% Similarity=0.082 Sum_probs=48.0
Q ss_pred HHHHHHHHHCCCc--EEEEEcCCcccHHHHHHHHHHcCCC-CCcEEE--eccCCHHHHHhhccc--ccEEEeCCCCCC-c
Q psy15362 71 QMWVNVLKAVPNS--ILWLLKFPAVGEANIQATAQALGLD-QHRILF--SNVAAKEEHVRRGQL--ADVCLDTPLCNG-H 142 (200)
Q Consensus 71 ~a~~~i~~~~p~~--~l~ivG~~~~~~~~l~~~~~~~gl~-~~rv~f--~g~~~~~~~~~~~~~--aDv~l~~~~~~~-g 142 (200)
.++.+.+.+.++. .+.+.+. ..+..++++++++-. ..++.+ ..-.+.+++..+++. +|++++..+... .
T Consensus 14 ~~ia~~L~~~g~~~~~V~v~~r---~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin~ag~~~~~ 90 (405)
T 4ina_A 14 GVVAHKMAMNREVFSHITLASR---TLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLNIALPYQDL 90 (405)
T ss_dssp HHHHHHHHTCTTTCCEEEEEES---CHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEEECSCGGGHH
T ss_pred HHHHHHHHhCCCCceEEEEEEC---CHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEEECCCcccCh
Confidence 3444445556764 6666653 245555555544210 012322 233345677777777 899998754332 3
Q ss_pred hHHHHHHHcCCCeeec
Q psy15362 143 TTSMDVLWTGTPVVTL 158 (200)
Q Consensus 143 ~~~lEAma~G~PVV~~ 158 (200)
..+-.++.+|+.+|-+
T Consensus 91 ~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 91 TIMEACLRTGVPYLDT 106 (405)
T ss_dssp HHHHHHHHHTCCEEES
T ss_pred HHHHHHHHhCCCEEEe
Confidence 3456678899999943
No 179
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=40.10 E-value=79 Score=20.92 Aligned_cols=107 Identities=10% Similarity=0.040 Sum_probs=57.2
Q ss_pred CCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc---cccEEEeCC--CCCCchHHHHHHHc---
Q psy15362 80 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ---LADVCLDTP--LCNGHTTSMDVLWT--- 151 (200)
Q Consensus 80 ~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~---~aDv~l~~~--~~~~g~~~lEAma~--- 151 (200)
.|..+++++.+.......+++.+++.|.. |.... +..+....+. ..|+++.-. +...|..+++.+..
T Consensus 13 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~---v~~~~--~~~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~ 87 (138)
T 2b4a_A 13 MQPFRVTLVEDEPSHATLIQYHLNQLGAE---VTVHP--SGSAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTK 87 (138)
T ss_dssp -CCCEEEEECSCHHHHHHHHHHHHHTTCE---EEEES--SHHHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHHcCCE---EEEeC--CHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCC
Confidence 35678888875433456677778776653 44332 2345544443 368885332 32346777777753
Q ss_pred CCCeeecC-CCcchhhhHHHHHhhcCCCccee--cCHHHHHHHHHHhhc
Q psy15362 152 GTPVVTLP-GETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGT 197 (200)
Q Consensus 152 G~PVV~~~-g~~~~~r~~~~~~~~~g~~~~ia--~~~~~yv~~a~~l~~ 197 (200)
.+|+|... +..-... . +.+ ..+++. -+.+++.....++..
T Consensus 88 ~~~ii~ls~~~~~~~~-~----~~~-~~~~l~KP~~~~~L~~~i~~~~~ 130 (138)
T 2b4a_A 88 QPSVLILTTGRHELIE-S----SEH-NLSYLQKPFAISELRAAIDYHKP 130 (138)
T ss_dssp CCEEEEEESCC--CCC-C----SSS-CEEEEESSCCHHHHHHHHHHTCC
T ss_pred CCCEEEEECCCCCHHH-H----HHH-HHheeeCCCCHHHHHHHHHHHHH
Confidence 68888754 3321111 1 112 333444 266677666655543
No 180
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=40.00 E-value=95 Score=25.59 Aligned_cols=75 Identities=13% Similarity=0.050 Sum_probs=47.5
Q ss_pred EEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchH-HHHHHH-cCCCeeecCCC
Q psy15362 84 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTT-SMDVLW-TGTPVVTLPGE 161 (200)
Q Consensus 84 ~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~-~lEAma-~G~PVV~~~g~ 161 (200)
|+++.+......+.++++.++.|++ +.+......++.......+|+++..+...-.-. +++++. .++=+|+..|.
T Consensus 3 ki~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~ 79 (343)
T 2yq5_A 3 KIAMYNVSPIEVPYIEDWAKKNDVE---IKTTDQALTSATVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRIV 79 (343)
T ss_dssp EEEEESCCGGGHHHHHHHHHHHTCE---EEEESSCCSTTGGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESSS
T ss_pred eEEEEecCcccHHHHHHHHHhCCeE---EEECCCCCCHHHHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEECce
Confidence 5566653334456778888777764 555444323566677889999876533233455 888885 57888876553
No 181
>3kip_A 3-dehydroquinase, type II; lyase; 2.95A {Candida albicans}
Probab=39.95 E-value=34 Score=25.50 Aligned_cols=58 Identities=16% Similarity=0.131 Sum_probs=33.4
Q ss_pred HHHHHH--HHcCCCCCcEEEeccCCHHHHHhhcccc-----c-EEEeCCCCC-CchHHHHHHH-cCCCeee
Q psy15362 97 NIQATA--QALGLDQHRILFSNVAAKEEHVRRGQLA-----D-VCLDTPLCN-GHTTSMDVLW-TGTPVVT 157 (200)
Q Consensus 97 ~l~~~~--~~~gl~~~rv~f~g~~~~~~~~~~~~~a-----D-v~l~~~~~~-~g~~~lEAma-~G~PVV~ 157 (200)
.+++.+ .++|++ +.|.-.=...++..+++.+ | |.++|--|+ -+..+.+|++ .++|+|=
T Consensus 47 ~l~~~a~~~~~g~~---v~~~QSN~EGeLId~Ih~A~~~~~dgIIINpgAyTHtSvAlrDAL~~v~~P~VE 114 (167)
T 3kip_A 47 AAIEQAKLKNNDSE---VLVFQSNTEGFIIDRIHEAKRQGVGFVVINAGAYTHTSVGIRDALLGTAIPFIE 114 (167)
T ss_dssp HHHHHHHHTCSSCE---EEEEECSCHHHHHHHHHHHHHTTCCEEEEECGGGGGTCHHHHHHHHHTTCCEEE
T ss_pred HHHHHhccccCCcE---EEEEecCCHHHHHHHHHHhhhcCccEEEEccccceeccHHHHHHHHhcCCCEEE
Confidence 344445 444553 4443332234555554433 3 567886665 3678999884 7899994
No 182
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=39.64 E-value=60 Score=26.29 Aligned_cols=62 Identities=19% Similarity=0.292 Sum_probs=39.6
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHH-HHcCCCeeecCCC
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDV-LWTGTPVVTLPGE 161 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEA-ma~G~PVV~~~g~ 161 (200)
..+++.+++.|+. +++-..+.+++..+...+|++=-++..-.-..++++ -..|+||+...|-
T Consensus 78 ~~L~~~~~e~Glp----~~tev~d~~~v~~l~~~vd~lkIgA~~~~n~~LLr~~a~~gkPVilK~G~ 140 (288)
T 3tml_A 78 RILSEVKRQLGLP----VLTDVHSIDEIEQVASVVDVLQTPAFLCRQTDFIHACARSGKPVNIKKGQ 140 (288)
T ss_dssp HHHHHHHHHHCCC----EEEECCSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCT
T ss_pred HHHHHHHHhcCCe----EEEEeCCHHHHHHHHHhCCEEEECcccccCHHHHHHHHccCCcEEEeCCC
Confidence 4577888899996 556555544443333458998655533222334544 4589999998885
No 183
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=39.27 E-value=88 Score=27.22 Aligned_cols=93 Identities=8% Similarity=-0.054 Sum_probs=49.2
Q ss_pred CCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc
Q psy15362 49 LPEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ 128 (200)
Q Consensus 49 l~~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~ 128 (200)
.....+.|.++|. .-..++++++.+. ..++... +.... +...+..++.|+. ++.|+-+ +. +..
T Consensus 17 ~~~~~i~~iGiGg------~Gms~lA~~l~~~-G~~V~~s-D~~~~-~~~~~~L~~~gi~----~~~G~~~-~~---~~~ 79 (524)
T 3hn7_A 17 FQGMHIHILGICG------TFMGSLALLARAL-GHTVTGS-DANIY-PPMSTQLEQAGVT----IEEGYLI-AH---LQP 79 (524)
T ss_dssp --CCEEEEETTTS------HHHHHHHHHHHHT-TCEEEEE-ESCCC-TTHHHHHHHTTCE----EEESCCG-GG---GCS
T ss_pred ecCCEEEEEEecH------hhHHHHHHHHHhC-CCEEEEE-CCCCC-cHHHHHHHHCCCE----EECCCCH-HH---cCC
Confidence 3344455555542 2455667766654 3444333 22121 2233344556875 4577653 22 234
Q ss_pred cccEEEeCCCCCCc-hHHHHHHHcCCCeeec
Q psy15362 129 LADVCLDTPLCNGH-TTSMDVLWTGTPVVTL 158 (200)
Q Consensus 129 ~aDv~l~~~~~~~g-~~~lEAma~G~PVV~~ 158 (200)
.+|++|.++-..-. -.+.+|...|+||+..
T Consensus 80 ~~d~vV~Spgi~~~~p~l~~a~~~gi~v~~~ 110 (524)
T 3hn7_A 80 APDLVVVGNAMKRGMDVIEYMLDTGLRYTSG 110 (524)
T ss_dssp CCSEEEECTTCCTTSHHHHHHHHHTCCEEEH
T ss_pred CCCEEEECCCcCCCCHHHHHHHHCCCcEEEH
Confidence 68999876533322 3466788889998864
No 184
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=39.07 E-value=54 Score=26.58 Aligned_cols=74 Identities=14% Similarity=0.042 Sum_probs=46.1
Q ss_pred HHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhh--cccccEEEeCCCCCC-chHHHHHHHc--C
Q psy15362 78 KAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRR--GQLADVCLDTPLCNG-HTTSMDVLWT--G 152 (200)
Q Consensus 78 ~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~--~~~aDv~l~~~~~~~-g~~~lEAma~--G 152 (200)
++.|+..++.+.+..+.+ ..+++++++|.. .+. .+.+++... ...+|+.+.+.+.+. -....+|+.. |
T Consensus 25 ~~~~~~elvav~d~~~~~-~~~~~a~~~g~~----~~~--~~~e~ll~~~~~~~iDvV~~atp~~~h~~~a~~al~a~~G 97 (312)
T 1nvm_B 25 RNAKYLEMGAMVGIDAAS-DGLARAQRMGVT----TTY--AGVEGLIKLPEFADIDFVFDATSASAHVQNEALLRQAKPG 97 (312)
T ss_dssp HHCSSEEEEEEECSCTTC-HHHHHHHHTTCC----EES--SHHHHHHHSGGGGGEEEEEECSCHHHHHHHHHHHHHHCTT
T ss_pred hhCcCeEEEEEEeCChhh-hHHHHHHHcCCC----ccc--CCHHHHHhccCCCCCcEEEECCChHHHHHHHHHHHHhCCC
Confidence 448999888877532222 145667777764 111 122455432 246899998876432 3457888999 9
Q ss_pred CCeeec
Q psy15362 153 TPVVTL 158 (200)
Q Consensus 153 ~PVV~~ 158 (200)
+.|++.
T Consensus 98 k~Vi~e 103 (312)
T 1nvm_B 98 IRLIDL 103 (312)
T ss_dssp CEEEEC
T ss_pred CEEEEc
Confidence 999984
No 185
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.50 E-value=96 Score=21.39 Aligned_cols=64 Identities=14% Similarity=0.087 Sum_probs=43.9
Q ss_pred CCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeec
Q psy15362 80 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 80 ~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~ 158 (200)
..+..+++-|.....+..+++++..+|- .+...+. ..++.+|... ..+..+..|...|+|||..
T Consensus 23 f~g~~i~itG~~~~~r~~l~~~i~~~Gg-----~v~~~~s--------~~~ThLI~~~--~~~~K~~~A~~~gi~IV~~ 86 (129)
T 2d8m_A 23 LQGVVVVLSGFQNPFRSELRDKALELGA-----KYRPDWT--------RDSTHLICAF--ANTPKYSQVLGLGGRIVRK 86 (129)
T ss_dssp STTEEEEEESCCTTHHHHHHHHHHHTTE-----EEESSCC--------TTCCEEEESS--SSCHHHHHHHHHTCEEEET
T ss_pred CCCeEEEEeCCCcHHHHHHHHHHHHcCC-----EEeCCcC--------CCCeEEEecC--CCChHHHHHHHCCCcEecH
Confidence 4577888887644457889999999884 3445443 2456666553 2356677888899999983
No 186
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=38.49 E-value=1.8e+02 Score=24.56 Aligned_cols=87 Identities=5% Similarity=-0.079 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHC---CCcEEEEEcCCcccH-HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCc
Q psy15362 67 PSTLQMWVNVLKAV---PNSILWLLKFPAVGE-ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGH 142 (200)
Q Consensus 67 ~~~l~a~~~i~~~~---p~~~l~ivG~~~~~~-~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g 142 (200)
.-...++..+.++. ++-++-|+|.-.... .++++++++.|++ -++.+.+. +.+|+.. +..|.+.+...++.
T Consensus 165 ~G~~~a~~al~~~~~~~~~~~VNilG~~~~~~~~eik~lL~~~Gi~-v~~~~~~~-~~~ei~~-~~~A~~niv~~~~~-- 239 (437)
T 3aek_A 165 QGEDTCLAAMVPTLDTTEAAELIVVGALPDVVEDQCLSLLTQLGVG-PVRMLPAR-RSDIEPA-VGPNTRFILAQPFL-- 239 (437)
T ss_dssp HHHHHHHHHHGGGSCBCCCCCEEEESCCCHHHHHHHHHHHHHTTCC-CEEEESCS-SGGGCCC-BCTTCEEEESSTTC--
T ss_pred HHHHHHHHHHHHHhcccCCCcEEEEeCCChhHHHHHHHHHHHcCCc-eEEEcCCC-CHHHHHh-hhcCcEEEEECccH--
Confidence 44555555666653 245677888522223 6899999999997 55656555 6677764 56677776555544
Q ss_pred hHHHHH-HHcCCCeeec
Q psy15362 143 TTSMDV-LWTGTPVVTL 158 (200)
Q Consensus 143 ~~~lEA-ma~G~PVV~~ 158 (200)
..+.+. --.|+|.+..
T Consensus 240 ~~~A~~Le~~GiP~i~~ 256 (437)
T 3aek_A 240 GETTGALERRGAKRIAA 256 (437)
T ss_dssp HHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHHcCCCeEec
Confidence 222222 4479999975
No 187
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=38.02 E-value=51 Score=24.63 Aligned_cols=59 Identities=19% Similarity=0.192 Sum_probs=38.0
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc----cc-EEEeCCCCC-CchHHHHHHH-cCCCeee
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL----AD-VCLDTPLCN-GHTTSMDVLW-TGTPVVT 157 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~----aD-v~l~~~~~~-~g~~~lEAma-~G~PVV~ 157 (200)
+.+++.++++|++ +.|.-.=...++..+++. +| |.++|--|+ -+..+.+|++ .++|+|=
T Consensus 60 ~~l~~~a~~~G~~---l~~~QSN~EGeLId~Ih~A~~~~dgIIINPgAyTHtSvAlrDAL~~v~~P~VE 125 (172)
T 3n8k_A 60 ALIEREAAELGLK---AVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLIE 125 (172)
T ss_dssp HHHHHHHHHTTCE---EEEEECSCHHHHHHHHHHHHHHTCCEEEECGGGGGTCHHHHHHHTTCCSCEEE
T ss_pred HHHHHHHHHcCCE---EEEEecCCHHHHHHHHHHhhhcCcEEEECcchhhhhhHHHHHHHHhCCCCEEE
Confidence 3566677778875 555433223455555444 34 667886665 3688999984 7899984
No 188
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=37.66 E-value=74 Score=24.46 Aligned_cols=108 Identities=11% Similarity=0.057 Sum_probs=62.1
Q ss_pred HCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCC----HHHHHhhc--ccccEEEeCCCCCCchHHHHHH---
Q psy15362 79 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA----KEEHVRRG--QLADVCLDTPLCNGHTTSMDVL--- 149 (200)
Q Consensus 79 ~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~----~~~~~~~~--~~aDv~l~~~~~~~g~~~lEAm--- 149 (200)
..++-++++..+ ...++.|.+..++.|...+.+...-.++ .+++...+ ...|+++.+|+.+- ..+++.+
T Consensus 130 ~~~~~~vL~~rg-~~~r~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~~~~d~v~ftS~s~v-~~~~~~~~~~ 207 (254)
T 4es6_A 130 RVHDPKVLIMRG-EGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLNGLVVSSGQGL-QNLYQLAAAD 207 (254)
T ss_dssp CSSSCEEEEEEC-SSCCCHHHHHHHHTTCEEEEEECEEEECCCCCTTHHHHHHHHTTCCEEECCSHHHH-HHHHHHHGGG
T ss_pred cCCCCEEEEEcC-CccHHHHHHHHHHCCCEEEEEeEEEeeCCCCCHHHHHHHHHhCCCCEEEEcCHHHH-HHHHHHhhHH
Confidence 456667777653 2446778888888887644444443332 13333333 35799998876321 1133322
Q ss_pred ---HcCCCeeecCCCcchhhhHHHHHhhcCCCcce-e--cCHHHHHHHHHH
Q psy15362 150 ---WTGTPVVTLPGETLASRVAASQLATLGCPELI-A--RTHKEYQDIAIR 194 (200)
Q Consensus 150 ---a~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~i-a--~~~~~yv~~a~~ 194 (200)
..++++++. +...+.-++..|+...+ + .+.+++++...+
T Consensus 208 ~~~l~~~~~~aI------G~~Ta~~l~~~G~~~~~~a~~~~~~~l~~ai~~ 252 (254)
T 4es6_A 208 WPEIGRLPLFVP------SPRVAEMARELGAQRVIDCRGASAPALLAALTS 252 (254)
T ss_dssp HHHHTTSCEEES------SHHHHHHHHHTTCSSEEECSSSSHHHHHHHHHH
T ss_pred HHHHhCCeEEEE------CHHHHHHHHHcCCCceEECCCCCHHHHHHHHHh
Confidence 346666663 33445566778987655 4 467777776654
No 189
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=37.52 E-value=1.2e+02 Score=22.31 Aligned_cols=65 Identities=8% Similarity=-0.049 Sum_probs=39.5
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCC----CCchHHHHHHHcCCCee
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC----NGHTTSMDVLWTGTPVV 156 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~----~~g~~~lEAma~G~PVV 156 (200)
.+..+++-|-....++.++++++++|.. +....+ ..+.-++..... ......+.|++.|+|||
T Consensus 3 ~~~~~~~sg~~~~~~~~l~~~~~~~G~~-----~~~~~~--------~~~THli~~~~~~~~~~rt~k~~~a~~~g~~IV 69 (214)
T 1t15_A 3 KRMSMVVSGLTPEEFMLVYKFARKHHIT-----LTNLIT--------EETTHVVMKTDAEFVCERTLKYFLGIAGGKWVV 69 (214)
T ss_dssp -CCEEEEESCCHHHHHHHHHHHHHHTCE-----ECSSCC--------TTCCEEEECBCTTSEECCBHHHHHHHHTTCEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhCCE-----EeCccC--------CCCcEEEEeCCcccchhhhHHHHHHHhcCCEEe
Confidence 3566777765333456788999998853 233322 233334433322 23567899999999999
Q ss_pred ec
Q psy15362 157 TL 158 (200)
Q Consensus 157 ~~ 158 (200)
..
T Consensus 70 ~~ 71 (214)
T 1t15_A 70 SY 71 (214)
T ss_dssp ET
T ss_pred CH
Confidence 75
No 190
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=37.44 E-value=63 Score=23.49 Aligned_cols=59 Identities=19% Similarity=0.192 Sum_probs=37.9
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccc----c-EEEeCCCCC-CchHHHHHHH-cCCCeee
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLA----D-VCLDTPLCN-GHTTSMDVLW-TGTPVVT 157 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~a----D-v~l~~~~~~-~g~~~lEAma-~G~PVV~ 157 (200)
+.+++.++++|++ +.|.-.=...++..+++.+ | +.++|--|+ -+..+.+|++ .++|+|=
T Consensus 34 ~~l~~~a~~~g~~---~~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~v~~P~VE 99 (146)
T 1h05_A 34 ALIEREAAELGLK---AVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLIE 99 (146)
T ss_dssp HHHHHHHHHTTCE---EEEEECSCHHHHHHHHHHHHHHTCCEEEECGGGGGTCHHHHHHHHTCCSCEEE
T ss_pred HHHHHHHHHcCCE---EEEEeeCCHHHHHHHHHHhhhcCcEEEECchhhccccHHHHHHHHhCCCCEEE
Confidence 4566677777775 5554332234555554443 4 567886665 3688999987 7999994
No 191
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=37.41 E-value=53 Score=25.70 Aligned_cols=79 Identities=10% Similarity=-0.088 Sum_probs=40.5
Q ss_pred HHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeC-CCCCCchHHHHHHHcCCC
Q psy15362 76 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDT-PLCNGHTTSMDVLWTGTP 154 (200)
Q Consensus 76 i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~-~~~~~g~~~lEAma~G~P 154 (200)
|.......++.+.|..|..-..+.+.+++.+. .+.+.+....- .-+..+|+++|= .|...--.+--+...|+|
T Consensus 6 ~~~~~~~~~~~v~Ga~GrMG~~i~~~~~~~~~-----elv~~id~~~~-~~l~~~DVvIDFT~P~a~~~~~~~~~~~g~~ 79 (228)
T 1vm6_A 6 IHHHHHHMKYGIVGYSGRMGQEIQKVFSEKGH-----ELVLKVDVNGV-EELDSPDVVIDFSSPEALPKTVDLCKKYRAG 79 (228)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC-----EEEEEEETTEE-EECSCCSEEEECSCGGGHHHHHHHHHHHTCE
T ss_pred cchhhccceeEEEEecCHHHHHHHHHHhCCCC-----EEEEEEcCCCc-ccccCCCEEEECCCHHHHHHHHHHHHHcCCC
Confidence 34445568889998644333445555555444 22222211000 122478999963 343222335567889999
Q ss_pred eee-cCC
Q psy15362 155 VVT-LPG 160 (200)
Q Consensus 155 VV~-~~g 160 (200)
+|. +.|
T Consensus 80 ~ViGTTG 86 (228)
T 1vm6_A 80 LVLGTTA 86 (228)
T ss_dssp EEECCCS
T ss_pred EEEeCCC
Confidence 997 455
No 192
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=37.29 E-value=57 Score=26.43 Aligned_cols=19 Identities=0% Similarity=-0.034 Sum_probs=15.2
Q ss_pred hHHHHHHHcCCCeeecCCC
Q psy15362 143 TTSMDVLWTGTPVVTLPGE 161 (200)
Q Consensus 143 ~~~lEAma~G~PVV~~~g~ 161 (200)
..+-||-+.|.||+.++-+
T Consensus 255 ~~Vr~a~~~G~pvv~~~P~ 273 (314)
T 3fwy_A 255 DAIRRSRLKKKTLFEMDED 273 (314)
T ss_dssp HHHHHHHHTTCCTTTSCCC
T ss_pred hHHHHHHHcCCceEEECCC
Confidence 5688999999999986544
No 193
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=37.25 E-value=98 Score=21.17 Aligned_cols=108 Identities=11% Similarity=0.063 Sum_probs=56.1
Q ss_pred cEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc----cccEEEeCC--CCCCchHHHHHHH---cCC
Q psy15362 83 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ----LADVCLDTP--LCNGHTTSMDVLW---TGT 153 (200)
Q Consensus 83 ~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~----~aDv~l~~~--~~~~g~~~lEAma---~G~ 153 (200)
.+++++.+.......+++.+++.|.. ++ .-..+.++....+. ..|+++.-. +...|..+++.+. ..+
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~~---v~-~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~ 112 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGFN---II-DTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNA 112 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE---EE-EEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTC
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCe---EE-EEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCC
Confidence 46777764323345666777776653 22 01122234443332 347775433 2233666666554 478
Q ss_pred CeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhh
Q psy15362 154 PVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG 196 (200)
Q Consensus 154 PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~ 196 (200)
|||...+..-..... -....|..+++.. +.+++.+...+++
T Consensus 113 ~ii~ls~~~~~~~~~--~~~~~g~~~~l~KP~~~~~l~~~i~~~l 155 (157)
T 3hzh_A 113 RVIMISALGKEQLVK--DCLIKGAKTFIVKPLDRAKVLQRVMSVF 155 (157)
T ss_dssp CEEEEESCCCHHHHH--HHHHTTCSEEEESSCCHHHHHHHHHHTT
T ss_pred cEEEEeccCcHHHHH--HHHHcCCCEEEeCCCCHHHHHHHHHHHh
Confidence 998765432211111 1234577777663 6777777666554
No 194
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=37.14 E-value=65 Score=26.69 Aligned_cols=70 Identities=7% Similarity=-0.025 Sum_probs=43.1
Q ss_pred cEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeecCC
Q psy15362 83 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTLPG 160 (200)
Q Consensus 83 ~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~~g 160 (200)
..+.+.+ ...++.++++++.+ ..-+...+.+++..+++.+|+++.+.|... ...+..++..|+.+|....
T Consensus 39 ~~V~V~~---R~~~~a~~la~~~~-----~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 39 FDVYIGD---VNNENLEKVKEFAT-----PLKVDASNFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp SEEEEEE---SCHHHHHHHTTTSE-----EEECCTTCHHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTCCEEECCC
T ss_pred CeEEEEE---CCHHHHHHHHhhCC-----eEEEecCCHHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCCeEEEccC
Confidence 4555543 23456666554321 111222345677778889999998876443 3456778899999997543
No 195
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=36.98 E-value=96 Score=20.96 Aligned_cols=110 Identities=10% Similarity=0.010 Sum_probs=55.7
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHc-CCCCCcEEEeccCCHHHHHhhcc---cccEEEeCC--CCCCchHHHHHHH---cC
Q psy15362 82 NSILWLLKFPAVGEANIQATAQAL-GLDQHRILFSNVAAKEEHVRRGQ---LADVCLDTP--LCNGHTTSMDVLW---TG 152 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~-gl~~~rv~f~g~~~~~~~~~~~~---~aDv~l~~~--~~~~g~~~lEAma---~G 152 (200)
..+++++.+.......+++.+++. |. ..|..... .++....+. ..|+++.-. +...|..+++.+. ..
T Consensus 3 ~~~iLivdd~~~~~~~l~~~L~~~~g~--~~v~~~~~--~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~ 78 (154)
T 2qsj_A 3 LTVVLIVDDHHLIRAGAKNLLEGAFSG--MRVEGAET--VSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPS 78 (154)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHHCTT--EEEEEESS--HHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTT
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCc--eEEEEecC--HHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCC
Confidence 357778865433346677777766 54 23433332 344444443 368886443 2223666666664 47
Q ss_pred CCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhhc
Q psy15362 153 TPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT 197 (200)
Q Consensus 153 ~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~~ 197 (200)
+|+|...+..-..... -....|..+++.. +.+++.....++..
T Consensus 79 ~~ii~ls~~~~~~~~~--~~~~~g~~~~l~kp~~~~~L~~~l~~~~~ 123 (154)
T 2qsj_A 79 NAVALISGETDHELIR--AALEAGADGFIPKSADPQVLIHAVSLILE 123 (154)
T ss_dssp SEEEEC-----CHHHH--HHHHTTCCBBCCTTSCHHHHHHHHHHHHT
T ss_pred CeEEEEeCCCCHHHHH--HHHHccCCEEEeCCCCHHHHHHHHHHHHc
Confidence 8988765432111111 1224577776653 66677666655543
No 196
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=36.80 E-value=58 Score=23.89 Aligned_cols=59 Identities=19% Similarity=0.311 Sum_probs=36.2
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc----cc-EEEeCCCCCC-chHHHHHHH-cCCCeee
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL----AD-VCLDTPLCNG-HTTSMDVLW-TGTPVVT 157 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~----aD-v~l~~~~~~~-g~~~lEAma-~G~PVV~ 157 (200)
+.+++.++++|++ +.|.-.=...++..+++. .| +.++|--|+- +..+.+|++ .++|+|=
T Consensus 33 ~~l~~~a~~~g~~---l~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~VE 98 (154)
T 1uqr_A 33 QHLQQSAQAQGYE---LDYFQANGEESLINRIHQAFQNTDFIIINPGAFTHTSVAIRDALLAVSIPFIE 98 (154)
T ss_dssp HHHHHHHHHTTCE---EEEEECSSHHHHHHHHHHTTTTCCEEEEECTTHHHHCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHCCCE---EEEEeeCCHHHHHHHHHHhhhcCcEEEECcchhccchHHHHHHHHhCCCCEEE
Confidence 3556667777775 555333223455555443 34 4577765553 677899986 7999994
No 197
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=35.90 E-value=96 Score=21.27 Aligned_cols=65 Identities=14% Similarity=0.028 Sum_probs=43.9
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCC-CCCchHHHHHHHcCCCeeec
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL-CNGHTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~-~~~g~~~lEAma~G~PVV~~ 158 (200)
.+.++++.|.-...++++++++.++|- .+.+.+. ...|.++..-- ...|..+-.|...|+|||.-
T Consensus 12 ~G~~~ViTG~l~~~R~e~k~~ie~~Gg-----kv~~sVs--------kkT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE 77 (113)
T 2cok_A 12 SNMKILTLGKLSRNKDEVKAMIEKLGG-----KLTGTAN--------KASLCISTKKEVEKMNKKMEEVKEANIRVVSE 77 (113)
T ss_dssp SSCEEEECSCCSSCHHHHHHHHHHTTC-----EEESCST--------TCSEEECCHHHHHHCCHHHHHHHHTTCCEECT
T ss_pred CCCEEEEEecCCCCHHHHHHHHHHCCC-----EEcCccc--------cCccEEEECCCCCCCChHHHHHHHCCCcEEeH
Confidence 467888988633357889999999885 3467664 23455543310 11356788999999999984
No 198
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=35.81 E-value=1.4e+02 Score=22.40 Aligned_cols=64 Identities=9% Similarity=0.014 Sum_probs=38.9
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCC----CCchHHHHHHHcCCCeee
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLC----NGHTTSMDVLWTGTPVVT 157 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~----~~g~~~lEAma~G~PVV~ 157 (200)
+..+++-|-....+..++++++++|.. +...++ ..+.-+|..... .....++.|++.|+|||+
T Consensus 7 ~~~i~~sg~~~~~~~~l~~~~~~~G~~-----~~~~~~--------~~~THlI~~~~~~~~~~rt~K~~~a~~~g~~IV~ 73 (229)
T 1l0b_A 7 DISMVVSGLTPKEVMIVQKFAEKYRLA-----LTDVIT--------EETTHVIIKTDAEFVCERTLKYFLGIAGGKWIVS 73 (229)
T ss_dssp CCEEEEESCCHHHHHHHHHHHHHTTCE-----ECSSCC--------SSCCEEEECBCTTSEECCCHHHHHHHHTTCEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHHcCCE-----EeCCcC--------CCCCEEEEcCCccccccccHHHHHHHHCCCcEec
Confidence 456666554323456788999998763 222221 234444443332 235679999999999997
Q ss_pred c
Q psy15362 158 L 158 (200)
Q Consensus 158 ~ 158 (200)
.
T Consensus 74 ~ 74 (229)
T 1l0b_A 74 Y 74 (229)
T ss_dssp T
T ss_pred H
Confidence 4
No 199
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=35.51 E-value=69 Score=23.19 Aligned_cols=59 Identities=15% Similarity=0.151 Sum_probs=37.2
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc----cc-EEEeCCCCC-CchHHHHHHH-cCCCeee
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL----AD-VCLDTPLCN-GHTTSMDVLW-TGTPVVT 157 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~----aD-v~l~~~~~~-~g~~~lEAma-~G~PVV~ 157 (200)
+.+++.++++|++ +.|.-.=...++..+++. .| +.++|--|+ -+..+.+|++ .++|+|=
T Consensus 32 ~~l~~~a~~~g~~---~~~~QSN~EgeLid~Ih~a~~~~dgiiiNpgA~THtSvAlrDAl~~v~~P~VE 97 (143)
T 1gqo_A 32 TDLFQFAEALHIQ---LTFFQSNHEGDLIDAIHEAEEQYSGIVLNPGALSHYSYAIRDAVSSISLPVVE 97 (143)
T ss_dssp HHHHHHHHHHTCE---EEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCEEE
T ss_pred HHHHHHHHHcCCE---EEEEeeCCHHHHHHHHHHhhhcCcEEEEccchhccccHHHHHHHHhCCCCEEE
Confidence 3566677777775 555433223455554433 44 457776665 3688999987 7899994
No 200
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=35.49 E-value=97 Score=23.49 Aligned_cols=110 Identities=11% Similarity=0.110 Sum_probs=60.3
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCC---HHHHHhhc--ccccEEEeCCCCCCchHHHHHHH--cCC
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA---KEEHVRRG--QLADVCLDTPLCNGHTTSMDVLW--TGT 153 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~---~~~~~~~~--~~aDv~l~~~~~~~g~~~lEAma--~G~ 153 (200)
++-++++..+. ..++.|.+..++.|..-+.+...-.++ ..+....+ ...|+++.+|+.+ -..+++.+. .++
T Consensus 109 ~~~~vL~~rg~-~~~~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~l~~~~~d~v~ftS~s~-v~~~~~~~~~~~~~ 186 (229)
T 3p9z_A 109 EKKSVLYLRAK-EIVSSLDTILLEHGIDFKQAVVYENKLKHLTLSEQNALKPKEKSILIFTAISH-AKAFLHYFEFLENY 186 (229)
T ss_dssp TTCEEEEEEES-SCSSCHHHHHHHTTCEEEEEEEEEEEECCCCHHHHHHHSCCTTCEEEECSHHH-HHHHHHHSCCCTTC
T ss_pred CCCEEEEECCc-cchHHHHHHHHHCCCeEEEEEEEEeeCCCccHHHHHHHhcCCCeEEEEECHHH-HHHHHHHhCcccCC
Confidence 44555555432 345678888888887645555444332 12222233 4579998887521 011333321 133
Q ss_pred CeeecCCCcchhhhHHHHHhhcCCCccee--cCHHHHHHHHHHhhcC
Q psy15362 154 PVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGTD 198 (200)
Q Consensus 154 PVV~~~g~~~~~r~~~~~~~~~g~~~~ia--~~~~~yv~~a~~l~~d 198 (200)
++++ .+...+.-++..|+.-.++ .+.+++++.+.+++.+
T Consensus 187 ~~~a------IG~~Ta~~l~~~G~~v~va~~~~~e~ll~~l~~l~~~ 227 (229)
T 3p9z_A 187 TAIS------IGNTTALYLQEQGIPSYIAKKPSLEACLELALSLRIK 227 (229)
T ss_dssp EEEE------SSHHHHHHHHHTTCCEEECSSSSHHHHHHHHHHTC--
T ss_pred EEEE------ECHHHHHHHHHcCCCceeCCCCCHHHHHHHHHHHhhh
Confidence 3333 2344556677778875555 4788999998887653
No 201
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=35.46 E-value=37 Score=26.48 Aligned_cols=30 Identities=20% Similarity=0.167 Sum_probs=24.8
Q ss_pred cccEEEeCCCCCCchHHHHHHHcCCCeeecC
Q psy15362 129 LADVCLDTPLCNGHTTSMDVLWTGTPVVTLP 159 (200)
Q Consensus 129 ~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~ 159 (200)
.-|++||+|. ++|++.++|+..|.-+|...
T Consensus 212 ~~~~vlD~f~-GsGtt~~~a~~~gr~~ig~e 241 (260)
T 1g60_A 212 PNDLVLDCFM-GSGTTAIVAKKLGRNFIGCD 241 (260)
T ss_dssp TTCEEEESSC-TTCHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEECCC-CCCHHHHHHHHcCCeEEEEe
Confidence 4689999875 56999999999999888753
No 202
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=35.44 E-value=96 Score=20.53 Aligned_cols=107 Identities=10% Similarity=0.004 Sum_probs=60.8
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc--------cccEEE-eCC-CCCCchHHHHHHH-
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--------LADVCL-DTP-LCNGHTTSMDVLW- 150 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~--------~aDv~l-~~~-~~~~g~~~lEAma- 150 (200)
..+++++.+.......+++.+++.|.. ..|...... ++....+. ..|+++ +.. +...|..+++.+.
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~g~~-~~v~~~~~~--~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~ 83 (143)
T 2qvg_A 7 KVDILYLEDDEVDIQSVERVFHKISSL-IKIEIAKSG--NQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRD 83 (143)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHHCTT-CCEEEESSH--HHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTT
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHhCCC-ceEEEECCH--HHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHc
Confidence 456788875433456778888887773 456654433 44444443 478885 432 3334777777775
Q ss_pred ----cCCCeeecCCCcchhhhHHHHHhhcCCCccee--cCHHHHHHHHH
Q psy15362 151 ----TGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAI 193 (200)
Q Consensus 151 ----~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia--~~~~~yv~~a~ 193 (200)
..+|+|...+..-..... -....|..+++. -+.+++.+...
T Consensus 84 ~~~~~~~~ii~ls~~~~~~~~~--~~~~~g~~~~l~kP~~~~~L~~~~~ 130 (143)
T 2qvg_A 84 DSSFTDIEVFVLTAAYTSKDKL--AFESLNIRGHLIKPLDYGEAIKLFW 130 (143)
T ss_dssp SGGGTTCEEEEEESCCCHHHHH--HHTTTTCCEEEESSCCHHHHHHHHH
T ss_pred CccccCCcEEEEeCCCCHHHHH--HHHhcCCCeEEECCCCHHHHHHHHH
Confidence 568888754432211111 122457777766 36666666543
No 203
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=35.44 E-value=57 Score=23.91 Aligned_cols=58 Identities=12% Similarity=0.206 Sum_probs=34.6
Q ss_pred HHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc----cc-EEEeCCCCC-CchHHHHHHH-cCCCeee
Q psy15362 97 NIQATAQALGLDQHRILFSNVAAKEEHVRRGQL----AD-VCLDTPLCN-GHTTSMDVLW-TGTPVVT 157 (200)
Q Consensus 97 ~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~----aD-v~l~~~~~~-~g~~~lEAma-~G~PVV~ 157 (200)
.+++.+.++|++ +.|.-.=...++..+++. +| +.++|--|+ -+..+.+|++ .++|+|=
T Consensus 40 ~l~~~a~~~g~~---~~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~~~~P~VE 104 (153)
T 3lwz_A 40 QLEIQAQGMDVA---LSHLQSNAEHALIDSIHQARGNTDFILINPAAFTHTSVALRDALLGVQIPFIE 104 (153)
T ss_dssp HHHHHHHHTTEE---EEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGGGTCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHcCCE---EEEEecCCHHHHHHHHHHhhhcCceEEEccccceechHHHHHHHHhcCCCEEE
Confidence 455666667764 444333222444444433 45 457776665 3678999884 7999994
No 204
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=35.33 E-value=1.8e+02 Score=23.67 Aligned_cols=104 Identities=10% Similarity=0.043 Sum_probs=53.6
Q ss_pred CEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCccc-HH----HHHHHHHHcCCCCCcEEEeccCCHHHHHhhc
Q psy15362 53 AIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVG-EA----NIQATAQALGLDQHRILFSNVAAKEEHVRRG 127 (200)
Q Consensus 53 ~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~-~~----~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~ 127 (200)
..++.+-+.........++...+.....++.+++++=.+... .+ .+.+.+.+.|++ -.++-+...+..++..-+
T Consensus 227 ~~i~pgHg~~~~~~~~~~~~~~~~~~~~~~~k~~i~~~S~~gnT~~la~~i~~~l~~~g~~-v~~~~~~~~~~~~~~~~l 305 (404)
T 2ohh_A 227 QMIAPSHGQIWTDPMKIIEAYTGWATGMVDERVTVIYDTMHGSTRKMAHAIAEGAMSEGVD-VRVYCLHEDDRSEIVKDI 305 (404)
T ss_dssp SEEECSSSCBBSSHHHHHHHHHHHHTTCCCSEEEEEECCSSSHHHHHHHHHHHHHHTTTCE-EEEEETTTSCHHHHHHHH
T ss_pred cEEecCCCccccCHHHHHHHHHHHhccCCCCcEEEEEECCChHHHHHHHHHHHHHHhCCCe-EEEEECCCCCHHHHHHHH
Confidence 455544454444345556655555543566665554322222 12 233334434543 233434445555555556
Q ss_pred ccccEEEeCCC-CCCc-----hHHHHHHH-------cCCCeee
Q psy15362 128 QLADVCLDTPL-CNGH-----TTSMDVLW-------TGTPVVT 157 (200)
Q Consensus 128 ~~aDv~l~~~~-~~~g-----~~~lEAma-------~G~PVV~ 157 (200)
..+|.++..+| |.++ ...++-+. .|+|+..
T Consensus 306 ~~~d~iiigsP~y~~~~~~~~k~~ld~l~~~~~~~l~~k~~~~ 348 (404)
T 2ohh_A 306 LESGAIALGAPTIYDEPYPSVGDLLMYLRGLKFNRTLTRKALV 348 (404)
T ss_dssp HTCSEEEEECCEETTEECTHHHHHHHHHHHHCGGGTCCEEEEE
T ss_pred HHCCEEEEECccccccchHHHHHHHHHhhhccccccCCCEEEE
Confidence 78999977665 4443 23555443 5889874
No 205
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=35.33 E-value=83 Score=25.18 Aligned_cols=54 Identities=17% Similarity=0.046 Sum_probs=33.6
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCH--------------HHHHhhcccccEEEeCCCC
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAK--------------EEHVRRGQLADVCLDTPLC 139 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~--------------~~~~~~~~~aDv~l~~~~~ 139 (200)
.+.+.+++|.++..+.....+ .++|. .+|++..+.+. +++.. + .+|+++++.|.
T Consensus 121 ~~k~vlvlGaGGaaraia~~L-~~~G~--~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~ 188 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYL-KDNFA--KDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPK 188 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHH-HHTTC--SEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSST
T ss_pred cCCEEEEECCcHHHHHHHHHH-HHcCC--CEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCcc
Confidence 467899999765544444444 45676 56887776541 12222 3 68999987664
No 206
>2l26_A Uncharacterized protein RV0899/MT0922; out membrane protein, membrane protein; NMR {Mycobacterium tuberculosis}
Probab=35.10 E-value=51 Score=26.46 Aligned_cols=52 Identities=17% Similarity=0.146 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEEcCCc---c--cH--------HHHHHHHHHcCCCCCcEEEecc
Q psy15362 66 DPSTLQMWVNVLKAVPNSILWLLKFPA---V--GE--------ANIQATAQALGLDQHRILFSNV 117 (200)
Q Consensus 66 ~~~~l~a~~~i~~~~p~~~l~ivG~~~---~--~~--------~~l~~~~~~~gl~~~rv~f~g~ 117 (200)
....++.++++++++|+.++.|.|... . .. ..+++++.+.|+..+|+...|+
T Consensus 186 ~~~~L~~ia~~L~~~p~~~i~I~GhTD~~G~~~~N~~LS~~RA~aV~~~L~~~Gv~~~ri~~~G~ 250 (284)
T 2l26_A 186 DYEILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGL 250 (284)
T ss_dssp CCHHHHHHHHHHTTGGGSCEEEEEEECCCSSSCCHHHHHHHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHHHHHHHcCCChHHEEEEEE
Confidence 345677788888889999999999621 1 10 2345556667998889998776
No 207
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=34.82 E-value=80 Score=24.12 Aligned_cols=62 Identities=11% Similarity=0.110 Sum_probs=40.7
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeec
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~ 158 (200)
+.++++-|-....++.+++.++++|.. + ... . ..+..++.+.. ......+.|++.|+|||+.
T Consensus 16 ~~~i~~SG~~~~~~~~l~~~i~~lGg~---v--~~~-----~----~~~THLI~~~~-~rT~K~l~A~~~g~~IVs~ 77 (219)
T 3sqd_A 16 TPFVLFTGFEPVQVQQYIKKLYILGGE---V--AES-----A----QKCTHLIASKV-TRTVKFLTAISVVKHIVTP 77 (219)
T ss_dssp CCEEEECSCCHHHHHHHHHHHHHTTCE---E--CSS-----G----GGCSEEECSSC-CCCHHHHHHTTTCSEEECH
T ss_pred CeEEEEeCCChHHHHHHHHHHHHCCCE---E--eCC-----C----CCceEEEECCC-CCCHHHHHHHHcCCCEecH
Confidence 467777765333446788999998863 2 221 1 35666665432 2335799999999999984
No 208
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=34.76 E-value=1.3e+02 Score=23.95 Aligned_cols=69 Identities=12% Similarity=-0.035 Sum_probs=43.8
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeec
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~ 158 (200)
|+..++-+.+. ..++.++++++++.. . -+-+.+++.. -...|+++.+.|... .-.+.+|+.+|++|++-
T Consensus 27 ~~~~lvav~d~--~~~~~~~~a~~~~~~-~-----~~~~~~~ll~-~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~E 96 (336)
T 2p2s_A 27 AGAELAGVFES--DSDNRAKFTSLFPSV-P-----FAASAEQLIT-DASIDLIACAVIPCDRAELALRTLDAGKDFFTA 96 (336)
T ss_dssp TTCEEEEEECS--CTTSCHHHHHHSTTC-C-----BCSCHHHHHT-CTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CCcEEEEEeCC--CHHHHHHHHHhcCCC-c-----ccCCHHHHhh-CCCCCEEEEeCChhhHHHHHHHHHHCCCcEEEe
Confidence 68888777653 334556677776432 1 1334455542 125899977766443 45688899999999983
No 209
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=34.65 E-value=1.1e+02 Score=24.88 Aligned_cols=58 Identities=10% Similarity=0.142 Sum_probs=39.7
Q ss_pred cHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCeeec
Q psy15362 94 GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 94 ~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~ 158 (200)
..++.++.++++|+. ++ +-+.+++..- ...|+++.+.|... .-.+.+|+.+|++|++-
T Consensus 55 ~~~~a~~~a~~~~~~--~~----~~~~~~ll~~-~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~E 113 (383)
T 3oqb_A 55 SAEKVEALAKRFNIA--RW----TTDLDAALAD-KNDTMFFDAATTQARPGLLTQAINAGKHVYCE 113 (383)
T ss_dssp SSHHHHHHHHHTTCC--CE----ESCHHHHHHC-SSCCEEEECSCSSSSHHHHHHHHTTTCEEEEC
T ss_pred CHHHHHHHHHHhCCC--cc----cCCHHHHhcC-CCCCEEEECCCchHHHHHHHHHHHCCCeEEEc
Confidence 356778888998884 22 2344666541 34898876665443 45689999999999973
No 210
>3s0y_A Motility protein B; peptidoglycan binding, flagellar rotation, chemotaxis, bacte flagellar motor, membrane, motor protein; 1.80A {Helicobacter pylori} PDB: 3s0w_A
Probab=34.53 E-value=1.4e+02 Score=22.13 Aligned_cols=71 Identities=10% Similarity=0.199 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHCCC-cEEEEEcCC---cc----c--H--------HHHHHHHHHcCCCCCcEEEeccCCH--------
Q psy15362 67 PSTLQMWVNVLKAVPN-SILWLLKFP---AV----G--E--------ANIQATAQALGLDQHRILFSNVAAK-------- 120 (200)
Q Consensus 67 ~~~l~a~~~i~~~~p~-~~l~ivG~~---~~----~--~--------~~l~~~~~~~gl~~~rv~f~g~~~~-------- 120 (200)
...++.++.+++.+|+ .++.|.|+. |. . . ..+.+++.+.|+.++|+...|+-..
T Consensus 75 ~~~L~~ia~~l~~~~~~~~i~I~GhTD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv~~~ri~~~g~G~~~P~~~n~t 154 (193)
T 3s0y_A 75 MLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDS 154 (193)
T ss_dssp HHHHHHHHHHHHTSCTTCEEEEEECCCSCCCTTSSCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECTTSCCSSCSCS
T ss_pred HHHHHHHHHHHHhCCCceEEEEEEEeCCCCCccccchhHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEECCcCCCCCCcC
Confidence 3567888888999996 499999962 12 1 1 1244555577998899999887421
Q ss_pred HHHHhhcccccEEEeCC
Q psy15362 121 EEHVRRGQLADVCLDTP 137 (200)
Q Consensus 121 ~~~~~~~~~aDv~l~~~ 137 (200)
.+-...=+..+|.+.+.
T Consensus 155 ~~~r~~NRRVei~i~~~ 171 (193)
T 3s0y_A 155 LENRMKNNRVEIFFSTD 171 (193)
T ss_dssp HHHHHHHTCEEEEEECC
T ss_pred hhhHhhCCCEEEEEEcC
Confidence 11222235566766554
No 211
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=34.50 E-value=80 Score=24.81 Aligned_cols=109 Identities=12% Similarity=-0.025 Sum_probs=61.1
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCC--H--HHHHhhc---ccccEEEeCCCCCCchHHHHHH----
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA--K--EEHVRRG---QLADVCLDTPLCNGHTTSMDVL---- 149 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~--~--~~~~~~~---~~aDv~l~~~~~~~g~~~lEAm---- 149 (200)
++-++++..+ ...++.|.+..++.|..-+.+...-.++ . +++...+ ...|+++.+|+.+- ..+++.+
T Consensus 156 ~g~~vLi~rg-~~~r~~L~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~l~~~~~~d~v~ftS~~~v-~~f~~~~~~~~ 233 (286)
T 1jr2_A 156 SALPLLFPCG-NLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITFFSPSGL-TYSLKHIQELS 233 (286)
T ss_dssp CSSCEEEEES-CGGGCCHHHHHHTTTCCEEEEECEEEEECTTHHHHHHHHHHHHCSCSEEEESSHHHH-HHHHHHHHHHH
T ss_pred CCCeEEEECC-hhhHHHHHHHHHHCCCeeEEEEEEEEeeCCCcHHHHHHHHHhCCCCCEEEEEChHHH-HHHHHHHhhhc
Confidence 4456666543 2345678888888887644444433332 1 2343434 35799998886321 1122222
Q ss_pred ---HcCCCeeecCCCcchhhhHHHHHhhcCCCcc-ee--cCHHHHHHHHHHhhc
Q psy15362 150 ---WTGTPVVTLPGETLASRVAASQLATLGCPEL-IA--RTHKEYQDIAIRLGT 197 (200)
Q Consensus 150 ---a~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~-ia--~~~~~yv~~a~~l~~ 197 (200)
..++++++. +...+..++..|+... ++ .+.+++++.+.+...
T Consensus 234 ~~~l~~~~i~aI------G~~Ta~~l~~~G~~~~~va~~~~~~~ll~al~~~~~ 281 (286)
T 1jr2_A 234 GDNIDQIKFAAI------GPTTARALAAQGLPVSCTAESPTPQALATGIRKALQ 281 (286)
T ss_dssp GGGGGGSEEEES------SHHHHHHHHHTTCCCSEECSSSSHHHHHHHHHHHTC
T ss_pred cccccCCEEEEE------CHHHHHHHHHcCCCceEecCCCCHHHHHHHHHHHHh
Confidence 234555542 3344556777888754 44 477888887776654
No 212
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=34.33 E-value=44 Score=25.49 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=22.2
Q ss_pred ccccEEEeCCCCCC-chHHHHHHHcCCCeeec
Q psy15362 128 QLADVCLDTPLCNG-HTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 128 ~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~ 158 (200)
..+|+.+...+... --.+.+++..|++||..
T Consensus 49 ~~~DvVv~~~~~~~~~~~~~~~l~~G~~vv~~ 80 (236)
T 2dc1_A 49 REMDVAVEAASQQAVKDYAEKILKAGIDLIVL 80 (236)
T ss_dssp SCCSEEEECSCHHHHHHHHHHHHHTTCEEEES
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCCcEEEE
Confidence 57899987765332 23467888899999874
No 213
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=34.30 E-value=2.2e+02 Score=24.36 Aligned_cols=87 Identities=13% Similarity=0.024 Sum_probs=46.1
Q ss_pred CEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccE
Q psy15362 53 AIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADV 132 (200)
Q Consensus 53 ~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv 132 (200)
.+.|.++|... +.++++++.+. ..++... +. ...+.. +..+++|+. ++.|+-+ + .+..+|+
T Consensus 24 ~v~viGiG~sG------~s~~A~~l~~~-G~~V~~~-D~-~~~~~~-~~l~~~gi~----~~~g~~~-~----~~~~~d~ 84 (494)
T 4hv4_A 24 HIHFVGIGGAG------MGGIAEVLANE-GYQISGS-DL-APNSVT-QHLTALGAQ----IYFHHRP-E----NVLDASV 84 (494)
T ss_dssp EEEEETTTSTT------HHHHHHHHHHT-TCEEEEE-CS-SCCHHH-HHHHHTTCE----EESSCCG-G----GGTTCSE
T ss_pred EEEEEEEcHhh------HHHHHHHHHhC-CCeEEEE-EC-CCCHHH-HHHHHCCCE----EECCCCH-H----HcCCCCE
Confidence 35555555332 23345555554 3444333 22 122223 345566875 5567543 2 2356899
Q ss_pred EEeCCCCCC-chHHHHHHHcCCCeeec
Q psy15362 133 CLDTPLCNG-HTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 133 ~l~~~~~~~-g~~~lEAma~G~PVV~~ 158 (200)
+|.++-..- --.+.+|...|+||+..
T Consensus 85 vV~Spgi~~~~p~~~~a~~~gi~v~~~ 111 (494)
T 4hv4_A 85 VVVSTAISADNPEIVAAREARIPVIRR 111 (494)
T ss_dssp EEECTTSCTTCHHHHHHHHTTCCEEEH
T ss_pred EEECCCCCCCCHHHHHHHHCCCCEEcH
Confidence 987653322 23467788899998863
No 214
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=34.28 E-value=1.5e+02 Score=25.84 Aligned_cols=37 Identities=8% Similarity=-0.037 Sum_probs=27.7
Q ss_pred HhhcccccEEEeCCCCCCchHHHH-HHHcCCCeeecCC
Q psy15362 124 VRRGQLADVCLDTPLCNGHTTSMD-VLWTGTPVVTLPG 160 (200)
Q Consensus 124 ~~~~~~aDv~l~~~~~~~g~~~lE-Ama~G~PVV~~~g 160 (200)
..+++..|++|+.++.-..+.++| ++.+|+-.|.+..
T Consensus 78 ~aLl~~~DvVIN~s~~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 78 GSTLEENDFLIDVSIGISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp GGGCCTTCEEEECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred HHHhcCCCEEEECCccccCHHHHHHHHHcCCCEEECCC
Confidence 346666799999887666666665 5669999998764
No 215
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=34.19 E-value=80 Score=25.40 Aligned_cols=73 Identities=4% Similarity=-0.038 Sum_probs=48.0
Q ss_pred CCCcEEEEEcCCcc--cHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCee
Q psy15362 80 VPNSILWLLKFPAV--GEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVV 156 (200)
Q Consensus 80 ~p~~~l~ivG~~~~--~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV 156 (200)
.|++.++-+.+..+ ..+.+.+.++++|+. .++ +-+.+++..- ...|+++.+.|... .-.+.+|+.+|++|+
T Consensus 22 ~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~ll~~-~~vD~V~I~tp~~~H~~~~~~al~aGkhVl 95 (337)
T 3ip3_A 22 DEECSITGIAPGVPEEDLSKLEKAISEMNIK-PKK----YNNWWEMLEK-EKPDILVINTVFSLNGKILLEALERKIHAF 95 (337)
T ss_dssp CTTEEEEEEECSSTTCCCHHHHHHHHTTTCC-CEE----CSSHHHHHHH-HCCSEEEECSSHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcEEEEEecCCchhhHHHHHHHHHHcCCC-Ccc----cCCHHHHhcC-CCCCEEEEeCCcchHHHHHHHHHHCCCcEE
Confidence 68899988876432 235677777777874 332 3445666531 24799877665332 345899999999999
Q ss_pred ec
Q psy15362 157 TL 158 (200)
Q Consensus 157 ~~ 158 (200)
+-
T Consensus 96 ~E 97 (337)
T 3ip3_A 96 VE 97 (337)
T ss_dssp EC
T ss_pred Ee
Confidence 73
No 216
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=33.42 E-value=1e+02 Score=20.34 Aligned_cols=74 Identities=11% Similarity=0.110 Sum_probs=43.3
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc--cccEEEeCC--CCCCchHHHHHHHc-----
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCLDTP--LCNGHTTSMDVLWT----- 151 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~--~aDv~l~~~--~~~~g~~~lEAma~----- 151 (200)
...+++++.+.......+++.+++.|.. |.... +.++....+. ..|+++.-. +...|..+++.+..
T Consensus 6 ~~~~iLivdd~~~~~~~l~~~L~~~g~~---v~~~~--~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~ 80 (142)
T 3cg4_A 6 HKGDVMIVDDDAHVRIAVKTILSDAGFH---IISAD--SGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQ 80 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTCE---EEEES--SHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCT
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHHCCeE---EEEeC--CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccC
Confidence 4567888875433456777888877763 44333 2344444432 368875332 33346777777754
Q ss_pred CCCeeecC
Q psy15362 152 GTPVVTLP 159 (200)
Q Consensus 152 G~PVV~~~ 159 (200)
.+|||...
T Consensus 81 ~~pii~~s 88 (142)
T 3cg4_A 81 GIAIVMLT 88 (142)
T ss_dssp TEEEEEEE
T ss_pred CCCEEEEE
Confidence 57888653
No 217
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=33.26 E-value=13 Score=29.29 Aligned_cols=29 Identities=28% Similarity=0.068 Sum_probs=19.8
Q ss_pred cccEEEeCCCCCCchHHHHHHHcCCCeeec
Q psy15362 129 LADVCLDTPLCNGHTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 129 ~aDv~l~~~~~~~g~~~lEAma~G~PVV~~ 158 (200)
.+|++++-+.-+.....++ +..|+|+|+.
T Consensus 54 ~~DVvIDft~p~a~~~~~~-l~~g~~vVig 82 (243)
T 3qy9_A 54 GADVAIDFSNPNLLFPLLD-EDFHLPLVVA 82 (243)
T ss_dssp TCSEEEECSCHHHHHHHHT-SCCCCCEEEC
T ss_pred CCCEEEEeCChHHHHHHHH-HhcCCceEeC
Confidence 7999997543222234556 8899999973
No 218
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=33.02 E-value=75 Score=26.91 Aligned_cols=74 Identities=11% Similarity=0.080 Sum_probs=47.1
Q ss_pred HCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccC----C-H----------------------HHHHhhccccc
Q psy15362 79 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVA----A-K----------------------EEHVRRGQLAD 131 (200)
Q Consensus 79 ~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~----~-~----------------------~~~~~~~~~aD 131 (200)
..++.+++++|.| ..-..+-+++..+|. ++|++..+. . + .++...+..+|
T Consensus 189 ~l~~~kVVv~GAG-aAG~~iAkll~~~G~--~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~AD 265 (388)
T 1vl6_A 189 KIEEVKVVVNGIG-AAGYNIVKFLLDLGV--KNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGAD 265 (388)
T ss_dssp CTTTCEEEEECCS-HHHHHHHHHHHHHTC--CEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCS
T ss_pred CCCCcEEEEECCC-HHHHHHHHHHHhCCC--CeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCC
Confidence 4678999999964 333445556666686 677777654 2 1 12555667899
Q ss_pred EEEeCCCCCC--chHHHHHHHcCCCeee
Q psy15362 132 VCLDTPLCNG--HTTSMDVLWTGTPVVT 157 (200)
Q Consensus 132 v~l~~~~~~~--g~~~lEAma~G~PVV~ 157 (200)
+++-.+. .+ .--.++.|+ --|||.
T Consensus 266 VlIG~Sa-p~l~t~emVk~Ma-~~pIIf 291 (388)
T 1vl6_A 266 FFIGVSR-GNILKPEWIKKMS-RKPVIF 291 (388)
T ss_dssp EEEECSC-SSCSCHHHHTTSC-SSCEEE
T ss_pred EEEEeCC-CCccCHHHHHhcC-CCCEEE
Confidence 9987664 22 344777776 356664
No 219
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=32.81 E-value=73 Score=27.97 Aligned_cols=113 Identities=10% Similarity=-0.068 Sum_probs=62.7
Q ss_pred hhhhhhcCCCCCCEEE-EEeCCC----CCCCHHHHHHHHH-HHHH-------CCCcEEEEEcCCc---ccHHHHHHHHHH
Q psy15362 41 ITSRQQYGLPEDAIVY-CNFNQL----YKIDPSTLQMWVN-VLKA-------VPNSILWLLKFPA---VGEANIQATAQA 104 (200)
Q Consensus 41 ~~~R~~l~l~~~~~v~-~~~~r~----~K~~~~~l~a~~~-i~~~-------~p~~~l~ivG~~~---~~~~~l~~~~~~ 104 (200)
..+++++++|.+..++ +..... ..+.+..++++.+ +... .++-++-|+|+-. .+..++++++++
T Consensus 167 ~~~~~~~~ip~~~~Vv~v~tpgf~Gs~~~G~~~a~~alv~~l~~~~~~~~~~~~~~~VNIig~~~~~~gD~~elkrlL~~ 246 (523)
T 3u7q_B 167 NNSKKEGFIPDEFPVPFAHTPSFVGSHVTGWDNMFEGIARYFTLKSMDDKVVGSNKKINIVPGFETYLGNFRVIKRMLSE 246 (523)
T ss_dssp HHHHHTTSSCTTSCCCBCCCCTTSSCHHHHHHHHHHHHHHHHHGGGGGGCCTTTTCCEEEECCSCCCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCceEEEeeCCCCCCChhHHHHHHHHHHHHHhcccccccccCCCCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 4566677777654332 211111 2233444454443 3321 1234567777422 123689999999
Q ss_pred cCCCCCcEEEe-------------------ccCCHHHHHhhcccccEEEeCCCCCCchHHHHHH--HcCCCeeec
Q psy15362 105 LGLDQHRILFS-------------------NVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL--WTGTPVVTL 158 (200)
Q Consensus 105 ~gl~~~rv~f~-------------------g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAm--a~G~PVV~~ 158 (200)
.|+. +.++ |-.+.+|+.. +..|++.+...++. +....+.| -.|+|.+..
T Consensus 247 ~Gi~---v~~lpd~s~~ld~p~~~~~~~~~ggtt~~ei~~-~~~A~~niv~~~~~-~~~~A~~Le~~~GiP~i~~ 316 (523)
T 3u7q_B 247 MGVG---YSLLSDPEEVLDTPADGQFRMYAGGTTQEEMKD-APNALNTVLLQPWH-LEKTKKFVEGTWKHEVPKL 316 (523)
T ss_dssp TTCC---EEESSCCTTTTSCCCSSCCCSCCCCBCHHHHHH-GGGSSEEEESSGGG-CHHHHHHHHHTSCCCCCCC
T ss_pred cCCe---EEEecCchhcccccccccccccCCCCCHHHHHH-hhcCcEEEEEccch-HHHHHHHHHHHhCCCeeec
Confidence 9997 3333 5556778776 45667776554432 34556666 379998853
No 220
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=32.49 E-value=1.8e+02 Score=23.33 Aligned_cols=72 Identities=13% Similarity=0.066 Sum_probs=43.3
Q ss_pred HHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCC
Q psy15362 75 NVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGT 153 (200)
Q Consensus 75 ~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~ 153 (200)
..+.+.|++.++-+.+. ..++.+ +..+. +.. +-+.+++.. -...|+++.+.|... .-.+.+|+.+|+
T Consensus 25 ~~~~~~~~~~l~av~d~--~~~~~~---~~~~~----~~~--~~~~~~ll~-~~~vD~V~i~tp~~~H~~~~~~al~aGk 92 (352)
T 3kux_A 25 PLIMGTPGLELAGVSSS--DASKVH---ADWPA----IPV--VSDPQMLFN-DPSIDLIVIPTPNDTHFPLAQSALAAGK 92 (352)
T ss_dssp HHHHTSTTEEEEEEECS--CHHHHH---TTCSS----CCE--ESCHHHHHH-CSSCCEEEECSCTTTHHHHHHHHHHTTC
T ss_pred HHHhhCCCcEEEEEECC--CHHHHH---hhCCC----Cce--ECCHHHHhc-CCCCCEEEEeCChHHHHHHHHHHHHCCC
Confidence 34556789998877653 233333 22211 111 233455543 124899987776554 456889999999
Q ss_pred Ceeec
Q psy15362 154 PVVTL 158 (200)
Q Consensus 154 PVV~~ 158 (200)
+|++-
T Consensus 93 hV~~E 97 (352)
T 3kux_A 93 HVVVD 97 (352)
T ss_dssp EEEEC
T ss_pred cEEEE
Confidence 99983
No 221
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=32.43 E-value=47 Score=26.89 Aligned_cols=34 Identities=9% Similarity=-0.149 Sum_probs=24.4
Q ss_pred hhcccccEEEeCCCCCC-chHHHHHHHcCCCeeec
Q psy15362 125 RRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 125 ~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV~~ 158 (200)
.++..+|+++.+.+-.. --.+..++..|++||+.
T Consensus 54 ~ll~~~DvViiatp~~~h~~~~~~al~aG~~Vv~e 88 (320)
T 1f06_A 54 KHADDVDVLFLCMGSATDIPEQAPKFAQFACTVDT 88 (320)
T ss_dssp GTTTTCSEEEECSCTTTHHHHHHHHHTTTSEEECC
T ss_pred HHhcCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEC
Confidence 33467999988765432 34577899999999985
No 222
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=32.34 E-value=1.1e+02 Score=20.09 Aligned_cols=62 Identities=10% Similarity=0.029 Sum_probs=42.7
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeee
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVT 157 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~ 157 (200)
.+..+++.|.-...++.+++++.++|- .+.+.++ ...|++|.... .|..+-.|...|+|||.
T Consensus 9 ~G~~~v~TG~l~~~R~e~~~~i~~~Gg-----~v~~sVs--------kkt~~LV~g~~--~gsK~~kA~~lgI~Ii~ 70 (92)
T 1l7b_A 9 KGLTFVITGELSRPREEVKALLRRLGA-----KVTDSVS--------RKTSYLVVGEN--PGSKLEKARALGVPTLT 70 (92)
T ss_dssp TTCEEECSTTTTSCHHHHHHHHHHTTC-----EEESCCS--------SSCCCBEECSS--SSTTHHHHHCSSSCCEE
T ss_pred CCcEEEEecCCCCCHHHHHHHHHHcCC-----EEeCccc--------CCeeEEEeCCC--CChHHHHHHHcCCcEEe
Confidence 456788888532367889999999886 3466664 24455554422 34668888899999998
No 223
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=32.04 E-value=1.1e+02 Score=20.19 Aligned_cols=111 Identities=6% Similarity=-0.071 Sum_probs=60.8
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc-------cccEEEeCC--CCCCchHHHHHHHc-
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ-------LADVCLDTP--LCNGHTTSMDVLWT- 151 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~-------~aDv~l~~~--~~~~g~~~lEAma~- 151 (200)
..+++++.+.......++..+++.|.. ..|.... +.++....+. ..|+++.-. +...|..+++.+..
T Consensus 9 ~~~iLivdd~~~~~~~l~~~l~~~~~~-~~v~~~~--~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~ 85 (146)
T 3ilh_A 9 IDSVLLIDDDDIVNFLNTTIIRMTHRV-EEIQSVT--SGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQH 85 (146)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHTTCCE-EEEEEES--SHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHH
T ss_pred cceEEEEeCCHHHHHHHHHHHHhcCCC-eeeeecC--CHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHh
Confidence 457788865323345677777776652 2444433 3345444443 378885332 33347777776654
Q ss_pred ------CCCeeecCCCcchhhhHHHHHhhcC-CCccee--cCHHHHHHHHHHhhc
Q psy15362 152 ------GTPVVTLPGETLASRVAASQLATLG-CPELIA--RTHKEYQDIAIRLGT 197 (200)
Q Consensus 152 ------G~PVV~~~g~~~~~r~~~~~~~~~g-~~~~ia--~~~~~yv~~a~~l~~ 197 (200)
.+|+|...+..-..... -....| ..+++. -+.+++.+...+...
T Consensus 86 ~~~~~~~~~ii~~t~~~~~~~~~--~~~~~g~~~~~l~KP~~~~~L~~~i~~~~~ 138 (146)
T 3ilh_A 86 FQPMKNKSIVCLLSSSLDPRDQA--KAEASDWVDYYVSKPLTANALNNLYNKVLN 138 (146)
T ss_dssp CGGGTTTCEEEEECSSCCHHHHH--HHHHCSSCCEEECSSCCHHHHHHHHHHHHC
T ss_pred hhhccCCCeEEEEeCCCChHHHH--HHHhcCCcceeeeCCCCHHHHHHHHHHHHH
Confidence 78888755432211111 112345 777766 367777776665543
No 224
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=31.74 E-value=1.2e+02 Score=20.58 Aligned_cols=108 Identities=13% Similarity=0.064 Sum_probs=60.9
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc--cccEEEeCC--CCCCchHHHHHHH-----cC
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCLDTP--LCNGHTTSMDVLW-----TG 152 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~--~aDv~l~~~--~~~~g~~~lEAma-----~G 152 (200)
..+++++.+.......+++.+++.|.. |.... +.++....+. ..|+++.-. +...|..+++.+. ..
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~g~~---v~~~~--~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~ 81 (154)
T 3gt7_A 7 AGEILIVEDSPTQAEHLKHILEETGYQ---TEHVR--NGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRT 81 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCE---EEEES--SHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTT
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHCCCE---EEEeC--CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCC
Confidence 467888875433456677888876653 43332 3344444433 368875433 3334777777775 46
Q ss_pred CCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhh
Q psy15362 153 TPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG 196 (200)
Q Consensus 153 ~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~ 196 (200)
+|+|...+..-..... -....|..+++.. +.+++.....+++
T Consensus 82 ~pii~~s~~~~~~~~~--~~~~~g~~~~l~KP~~~~~l~~~i~~~l 125 (154)
T 3gt7_A 82 IPVILLTILSDPRDVV--RSLECGADDFITKPCKDVVLASHVKRLL 125 (154)
T ss_dssp SCEEEEECCCSHHHHH--HHHHHCCSEEEESSCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHH--HHHHCCCCEEEeCCCCHHHHHHHHHHHH
Confidence 8998765432222111 1124577777763 6677766665544
No 225
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=31.73 E-value=1e+02 Score=25.07 Aligned_cols=16 Identities=0% Similarity=-0.178 Sum_probs=11.0
Q ss_pred HhhcccccEEEeCCCC
Q psy15362 124 VRRGQLADVCLDTPLC 139 (200)
Q Consensus 124 ~~~~~~aDv~l~~~~~ 139 (200)
...+..+|+++++.|.
T Consensus 221 ~~~l~~aDiIINaTp~ 236 (315)
T 3tnl_A 221 RKEIAESVIFTNATGV 236 (315)
T ss_dssp HHHHHTCSEEEECSST
T ss_pred HhhhcCCCEEEECccC
Confidence 3345578999987664
No 226
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=31.07 E-value=76 Score=27.72 Aligned_cols=87 Identities=14% Similarity=0.104 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccC-----CHHH---------------------
Q psy15362 69 TLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVA-----AKEE--------------------- 122 (200)
Q Consensus 69 ~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~-----~~~~--------------------- 122 (200)
++.++.-.-++..+.++++.|.| ..--.+-+++.+.|++.+||.+...- .+.+
T Consensus 206 llnAlki~gk~l~d~riV~~GAG-aAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~ 284 (487)
T 3nv9_A 206 LLNALKLVKKDIHECRMVFIGAG-SSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSK 284 (487)
T ss_dssp HHHHHHHHTCCGGGCCEEEECCS-HHHHHHHHHHHHTTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTC
T ss_pred HHHHHHHhCCChhhcEEEEECCC-HHHHHHHHHHHHcCCCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhccccc
Confidence 33443333344567899999864 33234556666789865678776431 1122
Q ss_pred ---HHhhcccccEEEeCCCC-C--CchHHHHHHHcCCCeee
Q psy15362 123 ---HVRRGQLADVCLDTPLC-N--GHTTSMDVLWTGTPVVT 157 (200)
Q Consensus 123 ---~~~~~~~aDv~l~~~~~-~--~g~~~lEAma~G~PVV~ 157 (200)
+...+..+|+|+-.|.- . +.--++++|+ -.|+|-
T Consensus 285 ~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~Ma-~~PIIF 324 (487)
T 3nv9_A 285 FGSIAEACVGADVLISLSTPGPGVVKAEWIKSMG-EKPIVF 324 (487)
T ss_dssp CCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTSC-SSCEEE
T ss_pred CCCHHHHHhcCCEEEEecccCCCCCCHHHHHhhc-CCCEEE
Confidence 22334557999877732 1 2356899996 689884
No 227
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=31.05 E-value=2.4e+02 Score=23.79 Aligned_cols=71 Identities=10% Similarity=-0.054 Sum_probs=46.7
Q ss_pred EEEEEcCCccc-HHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHH--HcCCCeeecC
Q psy15362 84 ILWLLKFPAVG-EANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL--WTGTPVVTLP 159 (200)
Q Consensus 84 ~l~ivG~~~~~-~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAm--a~G~PVV~~~ 159 (200)
.+.++|.-++. ..++++++++.|+. - +.|.+..+.+|+.. +..|++.+...++.+ ...+.| -+|+|.+..+
T Consensus 198 ~vnilG~~~~~~~~ei~~lL~~~Gi~-v-~~~~~~~~~~el~~-~~~A~~ni~~~~~~~--~~A~~Le~~~giP~~~~~ 271 (460)
T 2xdq_A 198 PLVLFGSLPDPVVTQLTLELKKQGIK-V-SGWLPAKRYTELPV-IDEGYYVAGVNPFLS--RTATTLIRRRKCQLITAP 271 (460)
T ss_dssp CEEEESCCCHHHHHHHHHHHGGGTCC-E-EEEESCSSGGGCCC-CCTTCEEEESSTTCH--HHHHHHHHTTCCEEECCC
T ss_pred cEEEEEecCccHHHHHHHHHHHcCCe-E-EEEeCCCCHHHHHc-cccCcEEEEcCHhHH--HHHHHHHHHcCCCceecC
Confidence 56677853222 24789999999996 3 33777777777765 466777776665542 445555 3699988754
No 228
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=30.94 E-value=56 Score=26.85 Aligned_cols=35 Identities=17% Similarity=0.005 Sum_probs=24.6
Q ss_pred cccccEEEeCCCCCCc-hHHHHHHHcCCCeeecCCC
Q psy15362 127 GQLADVCLDTPLCNGH-TTSMDVLWTGTPVVTLPGE 161 (200)
Q Consensus 127 ~~~aDv~l~~~~~~~g-~~~lEAma~G~PVV~~~g~ 161 (200)
+..+|+.+++.+.+.. -..-.++..|++||...++
T Consensus 76 ~~~vDvV~~atp~~~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 76 LDEADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp HHTCSEEEECCSTTHHHHHHHHHHHHTCCEEECTTS
T ss_pred hcCCCEEEECCCchhhHHHHHHHHHcCCEEEEecCC
Confidence 3589999988764432 2355677889999987654
No 229
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=30.91 E-value=1.1e+02 Score=19.98 Aligned_cols=109 Identities=10% Similarity=0.137 Sum_probs=62.1
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc--cc-ccEEEeCC--CCCCchHHHHHHHc----C
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QL-ADVCLDTP--LCNGHTTSMDVLWT----G 152 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~--~~-aDv~l~~~--~~~~g~~~lEAma~----G 152 (200)
..+++++.+.......+++.+++.|.. |.... +..+....+ .. .|+++.-. +...|..+++.+.. .
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~---v~~~~--~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ 81 (136)
T 3hdv_A 7 RPLVLVVDDNAVNREALILYLKSRGID---AVGAD--GAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAA 81 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCC---EEEES--SHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCce---EEEeC--CHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCC
Confidence 467888875433456788888887764 44322 223333332 22 68876433 33347777777753 4
Q ss_pred CCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhhc
Q psy15362 153 TPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT 197 (200)
Q Consensus 153 ~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~~ 197 (200)
+|+|...+..-..... -....|..+++.. +.+++....-+..+
T Consensus 82 ~~ii~~s~~~~~~~~~--~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 126 (136)
T 3hdv_A 82 LSIIVVSGDTDVEEAV--DVMHLGVVDFLLKPVDLGKLLELVNKELK 126 (136)
T ss_dssp CEEEEEESSCCHHHHH--HHHHTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCChHHHH--HHHhCCcceEEeCCCCHHHHHHHHHHHhc
Confidence 7888765433221111 1224577777763 77777777666554
No 230
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=30.88 E-value=1.1e+02 Score=19.59 Aligned_cols=110 Identities=11% Similarity=0.071 Sum_probs=62.1
Q ss_pred cEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc--ccccEEE-eCC-C-CCCchHHHHHHH-----cC
Q psy15362 83 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVCL-DTP-L-CNGHTTSMDVLW-----TG 152 (200)
Q Consensus 83 ~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~--~~aDv~l-~~~-~-~~~g~~~lEAma-----~G 152 (200)
.+++++.+.......+++.+++.|.. |.... +.++....+ ...|+++ +.. + ...|..+++.+. ..
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~~---v~~~~--~~~~a~~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~ 80 (127)
T 2gkg_A 6 KKILIVESDTALSATLRSALEGRGFT---VDETT--DGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKN 80 (127)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHTCE---EEEEC--CHHHHHHHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTT
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCce---EEEec--CHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccC
Confidence 46777765333346677777776763 44332 223433333 2367775 332 2 234667777764 47
Q ss_pred CCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhhcCCC
Q psy15362 153 TPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGTDRD 200 (200)
Q Consensus 153 ~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~~d~e 200 (200)
+|+|.. +..-..... -....|..+++.. +.+++.....++.+-+|
T Consensus 81 ~~ii~~-~~~~~~~~~--~~~~~g~~~~l~kp~~~~~l~~~i~~~~~~~~ 127 (127)
T 2gkg_A 81 VPIVII-GNPDGFAQH--RKLKAHADEYVAKPVDADQLVERAGALIGFPE 127 (127)
T ss_dssp SCEEEE-ECGGGHHHH--HHSTTCCSEEEESSCCHHHHHHHHHHHHCCCC
T ss_pred CCEEEE-ecCCchhHH--HHHHhCcchheeCCCCHHHHHHHHHHHHcCCC
Confidence 899987 543222111 1234577777663 77888887777766554
No 231
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=30.86 E-value=1.2e+02 Score=20.12 Aligned_cols=106 Identities=13% Similarity=0.061 Sum_probs=56.7
Q ss_pred cEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc----cccEEEe-CC-CCCCchHHHHHHH---cCC
Q psy15362 83 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ----LADVCLD-TP-LCNGHTTSMDVLW---TGT 153 (200)
Q Consensus 83 ~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~----~aDv~l~-~~-~~~~g~~~lEAma---~G~ 153 (200)
.+++++.+.......+++.+++.|.. |.... +.++....+. ..|+++. .. +...|..+++.+. ..+
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~g~~---v~~~~--~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ 78 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEIDGNE---VLTAS--SSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHM 78 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE---EEEES--SHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTC
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCce---EEEeC--CHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCC
Confidence 57788875433456777888876653 43322 2234444333 5788753 32 3334666666554 478
Q ss_pred CeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHh
Q psy15362 154 PVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRL 195 (200)
Q Consensus 154 PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l 195 (200)
|+|...+..-..... -....|..+++.. +.+++.....++
T Consensus 79 ~ii~ls~~~~~~~~~--~~~~~g~~~~l~kp~~~~~l~~~l~~~ 120 (143)
T 3jte_A 79 AVIILTGHGDLDNAI--LAMKEGAFEYLRKPVTAQDLSIAINNA 120 (143)
T ss_dssp EEEEEECTTCHHHHH--HHHHTTCSEEEESSCCHHHHHHHHHHH
T ss_pred eEEEEECCCCHHHHH--HHHHhCcceeEeCCCCHHHHHHHHHHH
Confidence 888754432211111 1224577776653 666666555443
No 232
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=30.85 E-value=39 Score=27.42 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=25.5
Q ss_pred cccEEEeCCCCCCchHHHHHHHcCCCeeecC
Q psy15362 129 LADVCLDTPLCNGHTTSMDVLWTGTPVVTLP 159 (200)
Q Consensus 129 ~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~ 159 (200)
.-|++||||- ++|++..+|+..|.-.|...
T Consensus 252 ~~~~VlDpF~-GsGtt~~aa~~~gr~~ig~e 281 (323)
T 1boo_A 252 PDDLVVDIFG-GSNTTGLVAERESRKWISFE 281 (323)
T ss_dssp TTCEEEETTC-TTCHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEECCC-CCCHHHHHHHHcCCCEEEEe
Confidence 4699999875 56999999999999998864
No 233
>4e4r_A Phosphate acetyltransferase; structural genomics, EUTD, center for structural genomics of infectious diseases, csgid; HET: TRS; 1.44A {Staphylococcus aureus subsp}
Probab=30.84 E-value=89 Score=25.68 Aligned_cols=47 Identities=26% Similarity=0.179 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEecc
Q psy15362 66 DPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNV 117 (200)
Q Consensus 66 ~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~ 117 (200)
.+..+++...+.++. .++.+++|+ ++.+++.++++|++.+++.+...
T Consensus 29 d~~vl~Aa~~a~~eg-~~~~iLvG~----~~~I~~~~~~~g~~~~~~eIi~~ 75 (331)
T 4e4r_A 29 DERVLTAATQLQATD-YVTPIVLGD----ETKVQSLAQKLNLDISNIELINP 75 (331)
T ss_dssp SHHHHHHHHHHHTSS-SEEEEEESC----HHHHHHHHHHTTCCCTTSEEECG
T ss_pred CHHHHHHHHHHHHcC-CcEEEEECC----HHHHHHHHHHcCCCcccCEEEcC
Confidence 367889888877754 699999984 46899999999986566766553
No 234
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=30.37 E-value=1.8e+02 Score=21.99 Aligned_cols=64 Identities=11% Similarity=0.179 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHC--CCcEEEEEcCC-------cccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEe
Q psy15362 68 STLQMWVNVLKAV--PNSILWLLKFP-------AVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 135 (200)
Q Consensus 68 ~~l~a~~~i~~~~--p~~~l~ivG~~-------~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~ 135 (200)
....+|..+++.. ++..++|+-+- -...+.+.+++.+..-. -.|+++|+.+.+++. ..||.+-.
T Consensus 104 ~a~~~l~~a~~~l~~~~yDlvILDEi~~al~~g~l~~~ev~~~l~~Rp~~-~~vIlTGr~ap~~l~---e~AD~VTe 176 (196)
T 1g5t_A 104 ACMAVWQHGKRMLADPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGH-QTVIITGRGCHRDIL---DLADTVSE 176 (196)
T ss_dssp HHHHHHHHHHHHTTCTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTT-CEEEEECSSCCHHHH---HHCSEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEeCCCccccCCCCCHHHHHHHHHhCcCC-CEEEEECCCCcHHHH---HhCcceee
Confidence 3456777777777 77888887541 12245677777765544 789999999887765 58999853
No 235
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=30.10 E-value=2.4e+02 Score=24.31 Aligned_cols=74 Identities=9% Similarity=-0.070 Sum_probs=50.6
Q ss_pred cEEEEEcCCc--ccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHH--HcCCCeeec
Q psy15362 83 SILWLLKFPA--VGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL--WTGTPVVTL 158 (200)
Q Consensus 83 ~~l~ivG~~~--~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAm--a~G~PVV~~ 158 (200)
-.+-|+|+-. .+..++++++++.|++ -.+.|.|..+.+|+..+ ..|++.+..+++ .+..+.+.| -.|+|.+..
T Consensus 221 ~~VNIiG~~~~~gD~~eik~lL~~~Gi~-v~~~~~g~~t~~ei~~~-~~A~~niv~~~~-~~~~~A~~Le~~~GiP~i~~ 297 (492)
T 3u7q_A 221 YDVAIIGDYNIGGDAWSSRILLEEMGLR-CVAQWSGDGSISEIELT-PKVKLNLVHCYR-SMNYISRHMEEKYGIPWMEY 297 (492)
T ss_dssp TEEEEEEECCBTTTTHHHHHHHHHTTCE-EEEEEETTCCHHHHHHG-GGCSEEEESCHH-HHHHHHHHHHHHHCCCEEEC
T ss_pred CcEEEECCCCChhhHHHHHHHHHHCCCe-EEEEeCCCCCHHHHHhh-hcCcEEEEEChH-HHHHHHHHHHHHhCCceEec
Confidence 4677777421 2357899999999997 66678888888898864 466776654332 234455555 379999975
Q ss_pred C
Q psy15362 159 P 159 (200)
Q Consensus 159 ~ 159 (200)
.
T Consensus 298 ~ 298 (492)
T 3u7q_A 298 N 298 (492)
T ss_dssp C
T ss_pred C
Confidence 4
No 236
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=30.01 E-value=1.3e+02 Score=20.27 Aligned_cols=113 Identities=12% Similarity=0.022 Sum_probs=58.3
Q ss_pred CCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc--ccccEEE-eCC-CCCCchHHHHHHH---cC
Q psy15362 80 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVCL-DTP-LCNGHTTSMDVLW---TG 152 (200)
Q Consensus 80 ~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~--~~aDv~l-~~~-~~~~g~~~lEAma---~G 152 (200)
.+..+++++.+.......+++.+++.|.. ..|.... +.++....+ ...|+++ +.. +...|..+++.+. ..
T Consensus 13 ~~~~~iLivdd~~~~~~~l~~~L~~~~~~-~~v~~~~--~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~ 89 (152)
T 3eul_A 13 PEKVRVVVGDDHPLFREGVVRALSLSGSV-NVVGEAD--DGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELP 89 (152)
T ss_dssp -CCEEEEEECSSHHHHHHHHHHHHHHSSE-EEEEEES--SHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCS
T ss_pred CceEEEEEEcCCHHHHHHHHHHHhhCCCe-EEEEEeC--CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCC
Confidence 34577888865333345677777776532 2222222 223433333 3467775 332 3334666666654 46
Q ss_pred CCeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhhc
Q psy15362 153 TPVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT 197 (200)
Q Consensus 153 ~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~~ 197 (200)
+|||...+..-..... -....|..+++.. +.+++.+...+++.
T Consensus 90 ~~ii~~s~~~~~~~~~--~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~ 134 (152)
T 3eul_A 90 TRVLLISAHDEPAIVY--QALQQGAAGFLLKDSTRTEIVKAVLDCAK 134 (152)
T ss_dssp CEEEEEESCCCHHHHH--HHHHTTCSEEEETTCCHHHHHHHHHHHHH
T ss_pred CeEEEEEccCCHHHHH--HHHHcCCCEEEecCCCHHHHHHHHHHHHc
Confidence 7888754432211111 1224577777663 66777766665543
No 237
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=29.53 E-value=1.9e+02 Score=22.89 Aligned_cols=53 Identities=11% Similarity=0.246 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHCCCcE---EEEEcCCcccHHHH---HHHHHHcCCCCCcEEEeccCCHH
Q psy15362 67 PSTLQMWVNVLKAVPNSI---LWLLKFPAVGEANI---QATAQALGLDQHRILFSNVAAKE 121 (200)
Q Consensus 67 ~~~l~a~~~i~~~~p~~~---l~ivG~~~~~~~~l---~~~~~~~gl~~~rv~f~g~~~~~ 121 (200)
+.+++++..+.+..|+.. -+|+|-++...+.+ .++++++++ +++.+..+.|..
T Consensus 139 e~~~~~i~~l~~~~~gi~i~~~~IvG~PgEt~ed~~~t~~~l~~l~~--~~v~~~~~~p~p 197 (304)
T 2qgq_A 139 EELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQF--DKLGAFVYSDEE 197 (304)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEEECCTTCCHHHHHHHHHHHHHHCC--SEEEEEECCC--
T ss_pred HHHHHHHHHHHhhCCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHcCC--CEEEEEEeeCCC
Confidence 567888888888778764 35677644444444 456777776 778888887643
No 238
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=29.33 E-value=87 Score=22.99 Aligned_cols=59 Identities=20% Similarity=0.146 Sum_probs=37.0
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccc----cc-EEEeCCCCCC-chHHHHHHH-cC-CCeee
Q psy15362 96 ANIQATAQALGLDQHRILFSNVAAKEEHVRRGQL----AD-VCLDTPLCNG-HTTSMDVLW-TG-TPVVT 157 (200)
Q Consensus 96 ~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~----aD-v~l~~~~~~~-g~~~lEAma-~G-~PVV~ 157 (200)
+.+++.++++|++ +.|.-.=...++..+++. .| +.++|--|+- +..+.+|++ .+ +|+|=
T Consensus 38 ~~l~~~a~~~g~~---v~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~THtSvAlrDAl~~v~~~P~VE 104 (156)
T 1gtz_A 38 ALCVKAAAAHGGT---VDFRQSNHEGELVDWIHEARLNHCGIVINPAAYSHTSVAILDALNTCDGLPVVE 104 (156)
T ss_dssp HHHHHHHHTTTCC---EEEEECSCHHHHHHHHHHHHHHCSEEEEECTTHHHHCHHHHHHHHTSTTCCEEE
T ss_pred HHHHHHHHHcCCE---EEEEeeCCHHHHHHHHHHhhhcCcEEEECchhhccccHHHHHHHHhcCCCCEEE
Confidence 3456677777775 555433333455555444 34 5577766653 678999987 56 89994
No 239
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=29.13 E-value=11 Score=30.24 Aligned_cols=37 Identities=16% Similarity=-0.039 Sum_probs=24.9
Q ss_pred HhhcccccEEEeCC-CCCCchHHHHHHHcCCCeee-cCC
Q psy15362 124 VRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPVVT-LPG 160 (200)
Q Consensus 124 ~~~~~~aDv~l~~~-~~~~g~~~lEAma~G~PVV~-~~g 160 (200)
..++..+|++++.+ |...-..+..|+..|+|+|+ +.|
T Consensus 67 ~~~l~~~DvVIDft~p~~~~~~~~~a~~~G~~vVigTtG 105 (273)
T 1dih_A 67 DAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTG 105 (273)
T ss_dssp TTTTTSCSEEEECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred HHHhcCCCEEEEcCChHHHHHHHHHHHhCCCCEEEECCC
Confidence 34456799999644 32222347788899999998 555
No 240
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=29.09 E-value=79 Score=27.66 Aligned_cols=87 Identities=13% Similarity=0.073 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHC-------CCcEEEEEcCCc------ccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEe
Q psy15362 69 TLQMWVNVLKAV-------PNSILWLLKFPA------VGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLD 135 (200)
Q Consensus 69 ~l~a~~~i~~~~-------p~~~l~ivG~~~------~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~ 135 (200)
...++..+.++. ++-++-|+|.-. .+..++++++++.|+. -++.|.|..+.+|+.. +..|.+-+.
T Consensus 133 ~~~al~alv~~~~~~~~~~~~~~VNIlG~~~~g~~~~gD~~eikrlL~~~Gi~-v~~~~pgg~t~~ei~~-~~~A~~niv 210 (525)
T 3aek_B 133 ADETFRALVRALAVPMERTPEVTCNLLGATALGFRHRDDVAEVTKLLATMGIK-VNVCAPLGASPDDLRK-LGQAHFNVL 210 (525)
T ss_dssp HHHHHHHHHHHHCCCCCCCSSCEEEEEEECTTCTTHHHHHHHHHHHHHTTTCE-EEEEEETTCCHHHHHT-GGGSSEEEE
T ss_pred HHHHHHHHHHHhccCccCCCCCceEEEecCCCCCCChhhHHHHHHHHHHCCCe-EEEEeCCCCCHHHHHh-hccCCEEEE
Confidence 344555555432 124688887532 1236799999999997 6666888888888876 456666665
Q ss_pred CCCCCCchHHHHHH--HcCCCeeec
Q psy15362 136 TPLCNGHTTSMDVL--WTGTPVVTL 158 (200)
Q Consensus 136 ~~~~~~g~~~lEAm--a~G~PVV~~ 158 (200)
.+++ .+..+.+.| -+|+|.+..
T Consensus 211 ~~~~-~g~~~A~~Le~r~GiP~i~~ 234 (525)
T 3aek_B 211 MYPE-TGESAARHLERACKQPFTKI 234 (525)
T ss_dssp CCHH-HHHHHHHHHHHHSCCCBCCC
T ss_pred EChh-hHHHHHHHHHHHcCCCceec
Confidence 4432 235566666 368888863
No 241
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=29.01 E-value=2.6e+02 Score=24.09 Aligned_cols=74 Identities=14% Similarity=0.074 Sum_probs=51.0
Q ss_pred CcEEEEEcCCc------ccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHH--HcCC
Q psy15362 82 NSILWLLKFPA------VGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVL--WTGT 153 (200)
Q Consensus 82 ~~~l~ivG~~~------~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAm--a~G~ 153 (200)
.-++-|+|.-+ .+..++++++++.|++ -+..|.|..+.+|+.. +..|++-+..+++ .+..+.+.| -.|+
T Consensus 166 ~~~VNiiG~~~~~~~~~gD~~eik~lL~~~Gi~-v~~~~~gg~~~~ei~~-~~~A~~niv~~~~-~~~~~A~~Le~~~Gi 242 (511)
T 2xdq_B 166 TPSVNIIGITTLGFHNQHDCRELKQLMADLGIQ-VNLVIPAAATVHDLQR-LPQAWFNLVPYRE-IGGLTAQYLEREFGQ 242 (511)
T ss_dssp SCEEEEEEECTTCTTHHHHHHHHHHHHHHHTCE-EEEEEETTCCTTTGGG-GGGSSEEECCCTT-SSHHHHHHHHHHHCC
T ss_pred CCceEEEeccCCCCCCccHHHHHHHHHHHCCCe-EEEEECCcCcHHHHHh-hccCCEEEEEchh-hhHHHHHHHHHHhCC
Confidence 44688887422 1236899999999997 5557788777778765 5677777766554 345566666 3799
Q ss_pred Ceeec
Q psy15362 154 PVVTL 158 (200)
Q Consensus 154 PVV~~ 158 (200)
|.+..
T Consensus 243 P~i~~ 247 (511)
T 2xdq_B 243 PSVRI 247 (511)
T ss_dssp CEECC
T ss_pred CeEee
Confidence 99963
No 242
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=28.88 E-value=1.2e+02 Score=19.62 Aligned_cols=108 Identities=13% Similarity=0.108 Sum_probs=61.0
Q ss_pred cEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc--cccEEEeCC--CCCCchHHHHHHH-----cCC
Q psy15362 83 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCLDTP--LCNGHTTSMDVLW-----TGT 153 (200)
Q Consensus 83 ~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~--~aDv~l~~~--~~~~g~~~lEAma-----~G~ 153 (200)
.+++++.+.......++...++.|.. |.... +.++....+. ..|+++.-. |...|..+++.+. ..+
T Consensus 3 ~~ILivdd~~~~~~~l~~~l~~~g~~---v~~~~--~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~ 77 (122)
T 3gl9_A 3 KKVLLVDDSAVLRKIVSFNLKKEGYE---VIEAE--NGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRI 77 (122)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE---EEEES--SHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTS
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCcE---EEEeC--CHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCC
Confidence 35777765333345677777777763 44322 3344444432 468886433 3334788888774 468
Q ss_pred CeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhhc
Q psy15362 154 PVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT 197 (200)
Q Consensus 154 PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~~ 197 (200)
|+|...+..-.... .-....|..+++.. +.+++.....++.+
T Consensus 78 pii~~s~~~~~~~~--~~~~~~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 78 PVIVLTAKGGEEDE--SLALSLGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp CEEEEESCCSHHHH--HHHHHTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred CEEEEecCCchHHH--HHHHhcChhhhccCCCCHHHHHHHHHHHhc
Confidence 99875443221111 11235577787763 77777777666543
No 243
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*
Probab=28.86 E-value=1.4e+02 Score=25.00 Aligned_cols=83 Identities=10% Similarity=-0.004 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHCCCcEEEEEc-CCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHH
Q psy15362 69 TLQMWVNVLKAVPNSILWLLK-FPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSM 146 (200)
Q Consensus 69 ~l~a~~~i~~~~p~~~l~ivG-~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~l 146 (200)
.++.+.++.++. +++-+++. +.....++|+++.+..++. -|.+-...+.-|+. +++.||.|+-+...++ ..+.-
T Consensus 267 I~rqIk~~vk~~-~lksVFIATDa~~~~~ELk~~L~~~~v~--vv~~~pe~a~ID~~-I~~~A~~FIGN~~SSFSa~I~r 342 (362)
T 3zy2_A 267 ILEQIVEKVGSI-GAKSVFVASDKDHMIDEINEALKPYEIE--AHRQEPDDMYTSLA-IMGRADLFVGNCVSTFSHIVKR 342 (362)
T ss_dssp HHHHHHHHHHHH-TCSEEEEEESSCCCHHHHHHHHGGGTCC--EECCSSCCHHHHHH-HHHHSSEEEECTTCHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCcEEEEecCCHHHHHHHHHHhhccCce--EEEeCCchhHHHHH-HHHhCCEeecCccccccHHHHH
Confidence 344445555543 34444443 3334567888888766663 23344444443433 5789999997654333 45677
Q ss_pred HHHHcC---CCe
Q psy15362 147 DVLWTG---TPV 155 (200)
Q Consensus 147 EAma~G---~PV 155 (200)
|=...| .|.
T Consensus 343 ERdi~G~~~~ps 354 (362)
T 3zy2_A 343 ERDHAGQSPRPS 354 (362)
T ss_dssp HHHHSSSSCCCE
T ss_pred HHHhcCCCCCCc
Confidence 777888 664
No 244
>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A
Probab=28.82 E-value=83 Score=25.21 Aligned_cols=52 Identities=6% Similarity=0.114 Sum_probs=33.4
Q ss_pred HHHHHHHHHC-CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhccccc
Q psy15362 71 QMWVNVLKAV-PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLAD 131 (200)
Q Consensus 71 ~a~~~i~~~~-p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aD 131 (200)
..|.+|.++. |++.+++||++ .+ =++.+++++.. |.--..+.++.+++++.|
T Consensus 218 sCFerI~~RFG~k~~yvvIGDG-~e---Ee~AAk~~n~P-----FwrI~~h~Dl~~l~~al~ 270 (274)
T 3geb_A 218 SCFERIMQRFGRKAVYVVIGDG-VE---EEQGAKKHNMP-----FWRISCHADLEALRHALE 270 (274)
T ss_dssp HHHHHHHHHHCTTSEEEEEESS-HH---HHHHHHHTTCC-----EEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEECCC-HH---HHHHHHHcCCC-----eEEeecCccHHHHHHhhc
Confidence 5677777775 89999999974 32 23456677774 222233567776665544
No 245
>3s06_A Motility protein B; peptidoglycan binding, flagellar rotation, chemotaxis, bacte flagellar motor, membrane, motor protein; 1.80A {Helicobacter pylori} PDB: 3s03_A 3s0h_A 3s02_A
Probab=28.81 E-value=1.4e+02 Score=21.37 Aligned_cols=71 Identities=10% Similarity=0.198 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHCCC-cEEEEEcCC---cc----c--H--------HHHHHHHHHcCCCCCcEEEeccC---C---H--
Q psy15362 67 PSTLQMWVNVLKAVPN-SILWLLKFP---AV----G--E--------ANIQATAQALGLDQHRILFSNVA---A---K-- 120 (200)
Q Consensus 67 ~~~l~a~~~i~~~~p~-~~l~ivG~~---~~----~--~--------~~l~~~~~~~gl~~~rv~f~g~~---~---~-- 120 (200)
...++.++.+++.+|+ .++.|.|+. +. . . ..+.+++.+.|+.++|+...|+- | .
T Consensus 48 ~~~L~~ia~~l~~~~~~~~i~I~GhTD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv~~~ri~~~g~G~~~P~~~~~t 127 (166)
T 3s06_A 48 MLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDS 127 (166)
T ss_dssp HHHHHHHHHHGGGSCTTCEEEEEEEEESCCCCCTTCCSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEEECCCTTCC
T ss_pred HHHHHHHHHHHHhCCCCceEEEEEeeCCCCcccccchhHHHHHHHHHHHHHHHHHHcCCChHhEEEEEECCcCCCCCCcC
Confidence 4567888888899995 589999851 12 1 0 13445566779988999987762 1 1
Q ss_pred HHHHhhcccccEEEeCC
Q psy15362 121 EEHVRRGQLADVCLDTP 137 (200)
Q Consensus 121 ~~~~~~~~~aDv~l~~~ 137 (200)
.+-...-+..+|.+.+.
T Consensus 128 ~~~~~~NRRVei~i~~~ 144 (166)
T 3s06_A 128 LENRMKNNRVEIFFSTD 144 (166)
T ss_dssp HHHHHHHTCEEEEEECC
T ss_pred hHHHhcCCCEEEEEEcC
Confidence 12222335567776654
No 246
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=28.60 E-value=1.8e+02 Score=23.48 Aligned_cols=72 Identities=11% Similarity=0.034 Sum_probs=44.2
Q ss_pred HHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCC
Q psy15362 75 NVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGT 153 (200)
Q Consensus 75 ~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~ 153 (200)
..+.+.|++.++-+.+. ..++ ..++++. +... -+.+++.. -...|+++.+.|... .-.+.+|+.+|+
T Consensus 23 ~~l~~~~~~~l~av~d~--~~~~---~~~~~~~----~~~~--~~~~~ll~-~~~vD~V~i~tp~~~H~~~~~~al~aGk 90 (358)
T 3gdo_A 23 PLLDVLDEYQISKIMTS--RTEE---VKRDFPD----AEVV--HELEEITN-DPAIELVIVTTPSGLHYEHTMACIQAGK 90 (358)
T ss_dssp HHHTTCTTEEEEEEECS--CHHH---HHHHCTT----SEEE--SSTHHHHT-CTTCCEEEECSCTTTHHHHHHHHHHTTC
T ss_pred HHHhhCCCeEEEEEEcC--CHHH---HHhhCCC----CceE--CCHHHHhc-CCCCCEEEEcCCcHHHHHHHHHHHHcCC
Confidence 34456789998877753 2232 3444432 2222 23355542 126899987776554 456889999999
Q ss_pred Ceeec
Q psy15362 154 PVVTL 158 (200)
Q Consensus 154 PVV~~ 158 (200)
+|++-
T Consensus 91 hVl~E 95 (358)
T 3gdo_A 91 HVVME 95 (358)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 99983
No 247
>1ou0_A Precorrin-8X methylmutase related protein; structural genomics, PSI, protein structure initiative; 2.10A {Thermoplasma acidophilum dsm 1728} SCOP: c.23.17.1
Probab=27.69 E-value=2.1e+02 Score=21.96 Aligned_cols=84 Identities=10% Similarity=0.020 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEE--eccCCHHHHHhhcccccEEEeCCCCCCchHH
Q psy15362 68 STLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILF--SNVAAKEEHVRRGQLADVCLDTPLCNGHTTS 145 (200)
Q Consensus 68 ~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f--~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~ 145 (200)
.-..++....+++++ .++.+|..+...-+|.+++++-++.|.=|+= .|++.-.|-.. .
T Consensus 115 Rsaaa~~~~~~~l~~-~I~aIGNAPTAL~~Lleli~~g~~~PalVIG~PVGFVgaaESK~-------------------~ 174 (207)
T 1ou0_A 115 RSAAGIRIAMQDHRN-SVIVIGNAPTALLEAMRMIEENGWYDIPIVGIPVGFINASKAKE-------------------G 174 (207)
T ss_dssp HHHHHHHHHHHHCSS-EEEEESSCHHHHHHHHHHHHHHTCTTCCEEECCCCSHHHHHHHH-------------------H
T ss_pred HHHHHHHHHHHHcCC-cEEEEeCcHHHHHHHHHHHHcCCCCCcEEEEeCCCccCHHHHHH-------------------H
Confidence 344555555666777 5666775433344566677665565443332 33443222221 1
Q ss_pred HHHHHcCCCeeecCCCcchhhhHHHHHh
Q psy15362 146 MDVLWTGTPVVTLPGETLASRVAASQLA 173 (200)
Q Consensus 146 lEAma~G~PVV~~~g~~~~~r~~~~~~~ 173 (200)
| +.+++|.|+..|..=-+-+.+++++
T Consensus 175 L--~~~~vP~I~~~GrkGGS~vAaAivN 200 (207)
T 1ou0_A 175 L--VSSHIEYISVEGHRGGSPIAASIVN 200 (207)
T ss_dssp H--HHSSSCEEEESSSCCCHHHHHHHHH
T ss_pred H--hcCCCCEEEEeCCCCCHHHHHHHHH
Confidence 2 2358898887764332334444443
No 248
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=27.58 E-value=1.1e+02 Score=23.18 Aligned_cols=12 Identities=8% Similarity=0.050 Sum_probs=5.6
Q ss_pred HHHHCCCcEEEE
Q psy15362 76 VLKAVPNSILWL 87 (200)
Q Consensus 76 i~~~~p~~~l~i 87 (200)
+.++.|+.++..
T Consensus 169 l~~~~~~~~~~~ 180 (250)
T 1tvc_A 169 LERSMRNLTVKA 180 (250)
T ss_dssp HHHHSSSCEEEE
T ss_pred HHHhCCCeEEEE
Confidence 334455555543
No 249
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=27.48 E-value=44 Score=24.39 Aligned_cols=35 Identities=20% Similarity=0.078 Sum_probs=23.8
Q ss_pred hhcccccEEEeCCCCCC-c--hHHHHHHHcCCCeeecC
Q psy15362 125 RRGQLADVCLDTPLCNG-H--TTSMDVLWTGTPVVTLP 159 (200)
Q Consensus 125 ~~~~~aDv~l~~~~~~~-g--~~~lEAma~G~PVV~~~ 159 (200)
.++..||+++.-..... | .-+-=|.+.|+|||+..
T Consensus 73 ~~i~~aD~vva~~~~~d~Gt~~EiGyA~algKPVi~l~ 110 (165)
T 2khz_A 73 NWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLF 110 (165)
T ss_dssp HHHHHCSEEEEECSSCCHHHHHHHHHHHHTCSSEEEEE
T ss_pred HHHHhCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 56889999964332222 2 33556889999999863
No 250
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=27.13 E-value=2.5e+02 Score=23.08 Aligned_cols=104 Identities=14% Similarity=0.194 Sum_probs=61.3
Q ss_pred eeCeeecccccccccCCCCCCCCCCCchh---hhhhhhhcCCCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHCCCcEEEE
Q psy15362 11 VNGIVLQNGLATNQTNTKTATGEEVPQSI---VITSRQQYGLPEDAIVYCNFNQLYKIDPSTLQMWVNVLKAVPNSILWL 87 (200)
Q Consensus 11 ~~gi~i~ng~~~~~~~~~~~~~~~~~~~~---~~~~R~~l~l~~~~~v~~~~~r~~K~~~~~l~a~~~i~~~~p~~~l~i 87 (200)
+.++|+.||-+ +.+. |.+. ...+++.+|-+-+...++.+|.. ++ .....+...+.+. ++.+.+
T Consensus 120 ~s~vPVINa~~-~~~H---------PtQ~LaDl~Ti~e~~g~~l~gl~va~vGD~-~~--~va~Sl~~~~~~~-G~~v~~ 185 (335)
T 1dxh_A 120 FAGVPVFNGLT-DEYH---------PTQMLADVLTMREHSDKPLHDISYAYLGDA-RN--NMGNSLLLIGAKL-GMDVRI 185 (335)
T ss_dssp HSSSCEEEEEC-SSCC---------HHHHHHHHHHHHHTCSSCGGGCEEEEESCC-SS--HHHHHHHHHHHHT-TCEEEE
T ss_pred hCCCCEEcCCC-CCCC---------cHHHHHHHHHHHHHcCCCcCCeEEEEecCC-cc--chHHHHHHHHHHc-CCEEEE
Confidence 35789999975 5433 2211 24567777622234556777775 33 5778888878777 689999
Q ss_pred EcCCccc-HHH----HHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeC
Q psy15362 88 LKFPAVG-EAN----IQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDT 136 (200)
Q Consensus 88 vG~~~~~-~~~----l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~ 136 (200)
++..+.. .+. .++.+++.|. ++.+.. +....+..+|++...
T Consensus 186 ~~P~~~~p~~~~~~~~~~~a~~~G~---~v~~~~-----d~~eav~~aDvvytd 231 (335)
T 1dxh_A 186 AAPKALWPHDEFVAQCKKFAEESGA---KLTLTE-----DPKEAVKGVDFVHTD 231 (335)
T ss_dssp ECCGGGSCCHHHHHHHHHHHHHHTC---EEEEES-----CHHHHTTTCSEEEEC
T ss_pred ECCcccCCCHHHHHHHHHHHHHcCC---eEEEEe-----CHHHHhCCCCEEEeC
Confidence 9853311 122 3445556664 355543 233346799988643
No 251
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=27.07 E-value=1.9e+02 Score=21.43 Aligned_cols=66 Identities=11% Similarity=0.019 Sum_probs=39.5
Q ss_pred CCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeec
Q psy15362 80 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 80 ~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~ 158 (200)
.|.-.+++-|-....+..+.+.++.+|=. .+....+ ..+.-++...+ .....++.|++.|++||..
T Consensus 9 ~~~~~~~~sgl~~~~~~~l~~~i~~lgG~----~~~~~~~--------~~~THlv~~~~-~rT~K~l~ai~~g~~Iv~~ 74 (199)
T 3u3z_A 9 KPTRTLVMTSMPSEKQNVVIQVVDKLKGF----SIAPDVC--------ETTTHVLSGKP-LRTLNVLLGIARGCWVLSY 74 (199)
T ss_dssp -CCCEEEEESCCHHHHHHHHHHHHHHCSC----EEESSCC--------TTEEEEEESSC-CCBHHHHHHHHTTCEEEET
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHHcCCc----EEecCCC--------CCCeEEEECCC-CCCHHHHHHHHCCCcEEeH
Confidence 45555666554333456688999988521 2333332 23455554332 3357899999999999985
No 252
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=27.00 E-value=64 Score=26.26 Aligned_cols=34 Identities=18% Similarity=0.086 Sum_probs=17.8
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccC
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVA 118 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~ 118 (200)
+.+.+++|.++..+.....+ .++|. .+|.+..+.
T Consensus 148 gk~~lVlGAGGaaraia~~L-~~~G~--~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQA-AIEGI--KEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHH-HHTTC--SEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHH-HHcCC--CEEEEEECC
Confidence 45677777644333333333 34565 456666554
No 253
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=26.94 E-value=1.4e+02 Score=19.91 Aligned_cols=110 Identities=15% Similarity=0.134 Sum_probs=59.1
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc--ccccEEE-eCC-CCCCchHHHHHHH------
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVCL-DTP-LCNGHTTSMDVLW------ 150 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~--~~aDv~l-~~~-~~~~g~~~lEAma------ 150 (200)
...+++++.+.......+++++++.|.. +.... +.++....+ ...|+++ |-. |...|..+++.+.
T Consensus 13 ~~~~iLivdd~~~~~~~l~~~L~~~g~~---v~~~~--~~~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~ 87 (143)
T 3m6m_D 13 RSMRMLVADDHEANRMVLQRLLEKAGHK---VLCVN--GAEQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASG 87 (143)
T ss_dssp --CEEEEECSSHHHHHHHHHHHHC--CE---EEEES--SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTT
T ss_pred ccceEEEEeCCHHHHHHHHHHHHHcCCe---EEEeC--CHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhcc
Confidence 3467888875433345677777776653 43322 334444433 3468875 432 3344777777764
Q ss_pred -cCCCeeecCCCcchhhhHHHHHhhcCCCccee--cCHHHHHHHHHHhhc
Q psy15362 151 -TGTPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRLGT 197 (200)
Q Consensus 151 -~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia--~~~~~yv~~a~~l~~ 197 (200)
..+|+|...+..-..... -....|..+++. -+.+++.+...++..
T Consensus 88 ~~~~pii~~s~~~~~~~~~--~~~~~Ga~~~l~KP~~~~~L~~~l~~~~~ 135 (143)
T 3m6m_D 88 MRYTPVVVLSADVTPEAIR--ACEQAGARAFLAKPVVAAKLLDTLADLAV 135 (143)
T ss_dssp CCCCCEEEEESCCCHHHHH--HHHHTTCSEEEESSCCHHHHHHHHHHHC-
T ss_pred CCCCeEEEEeCCCCHHHHH--HHHHcChhheeeCCCCHHHHHHHHHHHHH
Confidence 237888765432221111 123457777776 367777777666553
No 254
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=26.15 E-value=50 Score=26.90 Aligned_cols=30 Identities=13% Similarity=0.045 Sum_probs=25.4
Q ss_pred cccEEEeCCCCCCchHHHHHHHcCCCeeecC
Q psy15362 129 LADVCLDTPLCNGHTTSMDVLWTGTPVVTLP 159 (200)
Q Consensus 129 ~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~ 159 (200)
.-|++||||- ++|++..+|+..|.-.|...
T Consensus 242 ~~~~vlDpF~-GsGtt~~aa~~~~r~~ig~e 271 (319)
T 1eg2_A 242 PGSTVLDFFA-GSGVTARVAIQEGRNSICTD 271 (319)
T ss_dssp TTCEEEETTC-TTCHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEecCC-CCCHHHHHHHHcCCcEEEEE
Confidence 4699999875 56999999999999999764
No 255
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=26.11 E-value=2e+02 Score=21.25 Aligned_cols=62 Identities=8% Similarity=-0.030 Sum_probs=36.0
Q ss_pred EEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCC-CCCCchHHHHHHHcCCCeeec
Q psy15362 84 ILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 84 ~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~-~~~~g~~~lEAma~G~PVV~~ 158 (200)
.+++-|-....+..+.++++++|.. + ....+ ..+.-++... ........+.|++.|++||..
T Consensus 4 vi~~sg~~~~~~~~l~~~~~~~G~~---~--~~~~~--------~~~THlV~~~~~~~rt~K~l~a~~~g~~IV~~ 66 (210)
T 2nte_A 4 VLIGSGLSSEQQKMLSELAVILKAK---K--YTEFD--------STVTHVVVPGDAVQSTLKCMLGILNGCWILKF 66 (210)
T ss_dssp EEEESSCCHHHHHHHHHHHHHTTCE---E--ESSCC--------TTCCEEEESSSSCCCSHHHHHHHHTTCEEEET
T ss_pred EEEECCCCHHHHHHHHHHHHHcCCE---E--eCCCC--------CCCeEEEEcCCCcchHHHHHHHHhcCCEEecH
Confidence 3444443223456789999998863 2 22221 1333343332 223457788999999999974
No 256
>1td9_A Phosphate acetyltransferase; structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.75A {Bacillus subtilis} SCOP: c.77.1.5 PDB: 1xco_A
Probab=26.07 E-value=1.2e+02 Score=24.59 Aligned_cols=45 Identities=18% Similarity=0.088 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEec
Q psy15362 67 PSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSN 116 (200)
Q Consensus 67 ~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g 116 (200)
+..++++.+..++. .++.+++|+ .+.+++.++++|++.+++.+..
T Consensus 33 e~vl~aa~~~~~~~-~~~~iLvGd----~~~i~~~~~~~gl~~~~~~ii~ 77 (329)
T 1td9_A 33 ERILEAVSKLAGNK-VLNPIVIGN----ENEIQAKAKELNLTLGGVKIYD 77 (329)
T ss_dssp HHHHHHHHHHHHTT-SSEEEEESC----HHHHHHHHHTTTBCCTTCEEEC
T ss_pred hHHHHHHHHHHHcC-CcEEEEECC----HHHHHHHHHHcCCCcCCCEEEC
Confidence 78899998876653 689999985 4788999999887634566663
No 257
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=26.04 E-value=2.6e+02 Score=22.59 Aligned_cols=73 Identities=18% Similarity=0.166 Sum_probs=43.8
Q ss_pred HHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcC
Q psy15362 74 VNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTG 152 (200)
Q Consensus 74 ~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G 152 (200)
...+++.|++.++-+.+. ..++.+ +..+. +.. +-+.+++.. -...|+++.+.|... .-.+.+|+.+|
T Consensus 24 ~~~l~~~~~~~l~av~d~--~~~~~~---~~~~~----~~~--~~~~~~ll~-~~~~D~V~i~tp~~~H~~~~~~al~aG 91 (364)
T 3e82_A 24 APLIRSVPGLNLAFVASR--DEEKVK---RDLPD----VTV--IASPEAAVQ-HPDVDLVVIASPNATHAPLARLALNAG 91 (364)
T ss_dssp HHHHHTSTTEEEEEEECS--CHHHHH---HHCTT----SEE--ESCHHHHHT-CTTCSEEEECSCGGGHHHHHHHHHHTT
T ss_pred HHHHhhCCCeEEEEEEcC--CHHHHH---hhCCC----CcE--ECCHHHHhc-CCCCCEEEEeCChHHHHHHHHHHHHCC
Confidence 344566789998877653 233332 33322 122 233455542 126899987766443 45688999999
Q ss_pred CCeeec
Q psy15362 153 TPVVTL 158 (200)
Q Consensus 153 ~PVV~~ 158 (200)
++|++-
T Consensus 92 k~Vl~E 97 (364)
T 3e82_A 92 KHVVVD 97 (364)
T ss_dssp CEEEEC
T ss_pred CcEEEe
Confidence 999984
No 258
>3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis}
Probab=25.78 E-value=90 Score=25.35 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=21.0
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEEcCC
Q psy15362 66 DPSTLQMWVNVLKAVPNSILWLLKFP 91 (200)
Q Consensus 66 ~~~~l~a~~~i~~~~p~~~l~ivG~~ 91 (200)
...+.+.+....+++|+.+++++|.+
T Consensus 116 ~~~~~~~i~~~~~~CP~TkiVL~GYS 141 (302)
T 3aja_A 116 MRTTVKAMTDMNDRCPLTSYVIAGFS 141 (302)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEET
T ss_pred HHHHHHHHHHHHhhCCCCcEEEEeeC
Confidence 34566677777889999999999974
No 259
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=25.57 E-value=1.2e+02 Score=24.52 Aligned_cols=71 Identities=13% Similarity=-0.005 Sum_probs=42.7
Q ss_pred HHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCC
Q psy15362 76 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTP 154 (200)
Q Consensus 76 i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~P 154 (200)
.+.+.|++.++-+.+..+.+ ..++++. +... -+.+++.. -...|+++.+.|... --.+.+|+.+|++
T Consensus 24 ~l~~~~~~~l~av~d~~~~~-----~~~~~~~----~~~~--~~~~~ll~-~~~vD~V~i~tp~~~H~~~~~~al~aGkh 91 (362)
T 3fhl_A 24 FISTNPHFELYKIVERSKEL-----SKERYPQ----ASIV--RSFKELTE-DPEIDLIVVNTPDNTHYEYAGMALEAGKN 91 (362)
T ss_dssp HHHHCTTEEEEEEECSSCCG-----GGTTCTT----SEEE--SCSHHHHT-CTTCCEEEECSCGGGHHHHHHHHHHTTCE
T ss_pred HHhhCCCeEEEEEEcCCHHH-----HHHhCCC----CceE--CCHHHHhc-CCCCCEEEEeCChHHHHHHHHHHHHCCCe
Confidence 34567899998777643322 2233321 2222 23356553 124899987776543 4568899999999
Q ss_pred eeec
Q psy15362 155 VVTL 158 (200)
Q Consensus 155 VV~~ 158 (200)
|++-
T Consensus 92 Vl~E 95 (362)
T 3fhl_A 92 VVVE 95 (362)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9983
No 260
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=25.54 E-value=1.9e+02 Score=22.42 Aligned_cols=74 Identities=12% Similarity=0.077 Sum_probs=46.2
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc-cccEE-EeCCCCCCchHHHHHHHc---CCCee
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ-LADVC-LDTPLCNGHTTSMDVLWT---GTPVV 156 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~-~aDv~-l~~~~~~~g~~~lEAma~---G~PVV 156 (200)
.+++++.+. . ...+-+.++++|+. .+.|-...+|+...++ .+|++ +.|...-+|...+.++.. .+|++
T Consensus 106 GA~fIvsP~--~-~~~vi~~~~~~gi~----~ipGv~TptEi~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~ip~~ 178 (232)
T 4e38_A 106 GATFVVSPG--F-NPNTVRACQEIGID----IVPGVNNPSTVEAALEMGLTTLKFFPAEASGGISMVKSLVGPYGDIRLM 178 (232)
T ss_dssp TCSEEECSS--C-CHHHHHHHHHHTCE----EECEECSHHHHHHHHHTTCCEEEECSTTTTTHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEeCC--C-CHHHHHHHHHcCCC----EEcCCCCHHHHHHHHHcCCCEEEECcCccccCHHHHHHHHHHhcCCCee
Confidence 356665432 2 34455667777774 6677777777766554 47877 544322257888888874 57788
Q ss_pred ecCCCc
Q psy15362 157 TLPGET 162 (200)
Q Consensus 157 ~~~g~~ 162 (200)
.+-|-.
T Consensus 179 ptGGI~ 184 (232)
T 4e38_A 179 PTGGIT 184 (232)
T ss_dssp EBSSCC
T ss_pred eEcCCC
Confidence 776643
No 261
>2zf8_A MOTY, component of sodium-driven polar flagellar motor; beta barrel, 2-layer sandwich, flagellum, structural protein; 2.85A {Vibrio alginolyticus}
Probab=24.96 E-value=1e+02 Score=24.61 Aligned_cols=51 Identities=14% Similarity=0.232 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHCCCcE-EEEEcCCcc-----c--------HHHHHHHHHHcCCCCCcEEEeccC
Q psy15362 68 STLQMWVNVLKAVPNSI-LWLLKFPAV-----G--------EANIQATAQALGLDQHRILFSNVA 118 (200)
Q Consensus 68 ~~l~a~~~i~~~~p~~~-l~ivG~~~~-----~--------~~~l~~~~~~~gl~~~rv~f~g~~ 118 (200)
..|+.++.+++..|+.+ +.|.|.... . ...+++...+.|++++|+...|+=
T Consensus 179 ~~L~~ia~~L~~~p~~~~I~I~GhTD~~G~~~~N~~LS~~RA~aV~~~L~~~GI~~~ri~~~G~G 243 (278)
T 2zf8_A 179 KRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQSLSERRAESLRDYFQSLGLPEDRIQVQGYG 243 (278)
T ss_dssp HHHHHHHHHHTTCCSCCEEEEEEC-------CCCHHHHHHHHHHHHHHHHHHSCCTTSEECCEEC
T ss_pred HHHHHHHHHHHhCCCccEEEEEeecCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEC
Confidence 45677777888899875 778886311 0 023455555679988899988764
No 262
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=24.78 E-value=1.6e+02 Score=19.80 Aligned_cols=64 Identities=6% Similarity=0.093 Sum_probs=32.7
Q ss_pred CCEEEEEeCCCCCCCHHHHHHHH-HHHHHCCCcEEEEEcCCccc-HHHHHHHHHHcCCCCCcEEEeccC
Q psy15362 52 DAIVYCNFNQLYKIDPSTLQMWV-NVLKAVPNSILWLLKFPAVG-EANIQATAQALGLDQHRILFSNVA 118 (200)
Q Consensus 52 ~~~v~~~~~r~~K~~~~~l~a~~-~i~~~~p~~~l~ivG~~~~~-~~~l~~~~~~~gl~~~rv~f~g~~ 118 (200)
+.++++..|+........+..+. .+.++.+++..-++....+. .+.++++.+ .|. ++|++.+..
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~le~~~P~l~~~l~~l~~-~G~--~~vvvvPlf 71 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAYMELAEPSLDTIVNRAKG-QGV--EQFTVVPLF 71 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEESSSSSSBHHHHHHHHHH-TTC--CEEEEEECC
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEEEeCCCCCHHHHHHHHHH-cCC--CEEEEEecc
Confidence 35666666665432222333333 34455566666666422233 344444443 466 567777764
No 263
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=24.76 E-value=1.2e+02 Score=24.70 Aligned_cols=44 Identities=5% Similarity=-0.103 Sum_probs=32.3
Q ss_pred cCCHHHHHhhcccccEEEeCCCCCCc-hHHHHHHHcCCCeeecCC
Q psy15362 117 VAAKEEHVRRGQLADVCLDTPLCNGH-TTSMDVLWTGTPVVTLPG 160 (200)
Q Consensus 117 ~~~~~~~~~~~~~aDv~l~~~~~~~g-~~~lEAma~G~PVV~~~g 160 (200)
..+.+.+..+++.+|+++.+.|...+ ..+--|+.+|+.+|...+
T Consensus 65 ~~d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~~yvD~s~ 109 (365)
T 3abi_A 65 ASNFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEEEECCC
T ss_pred cCCHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCcceEeeec
Confidence 33457788888999999988765444 445566779999997644
No 264
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=24.57 E-value=2.2e+02 Score=21.14 Aligned_cols=15 Identities=20% Similarity=0.045 Sum_probs=8.0
Q ss_pred hHHHHHHHcCCCeee
Q psy15362 143 TTSMDVLWTGTPVVT 157 (200)
Q Consensus 143 ~~~lEAma~G~PVV~ 157 (200)
..+.++..-|.=||.
T Consensus 133 ~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 133 TLISKVKTENIKIVV 147 (196)
T ss_dssp HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHCCCeEEE
Confidence 345555555655555
No 265
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=24.54 E-value=1.8e+02 Score=22.30 Aligned_cols=65 Identities=9% Similarity=-0.060 Sum_probs=42.2
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeec
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTL 158 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~ 158 (200)
+.++++-|-....+..+++.++++|.. + ...- .+-..|.-+|.+.+ .-...++.|+++|++||+.
T Consensus 9 ~~~~~~Sg~~~~~~~~l~~~i~~LGg~---~--~~~~------~~~~~~THlV~~~~-~RT~K~l~aia~G~wIvs~ 73 (235)
T 3al2_A 9 QYIFQLSSLNPQERIDYCHLIEKLGGL---V--IEKQ------CFDPTCTHIVVGHP-LRNEKYLASVAAGKWVLHR 73 (235)
T ss_dssp CCEEEEESCCHHHHHHHHHHHHHTTCE---E--CCSS------SCCTTCCEEEESSC-CCSHHHHHHHHTTCEEECT
T ss_pred CEEEEEcCCCHHHHHHHHHHHHHcCCE---E--eccC------CCCCCCcEEEECCC-CCCHHHHHHHHcCCcCccH
Confidence 567777764333456788999998863 2 1110 01135666766653 2257899999999999985
No 266
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=24.48 E-value=1.6e+02 Score=23.72 Aligned_cols=68 Identities=7% Similarity=-0.034 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHC----CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCC
Q psy15362 67 PSTLQMWVNVLKAV----PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL 138 (200)
Q Consensus 67 ~~~l~a~~~i~~~~----p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~ 138 (200)
+-.-.+..++++++ .+.+.+++|.++.--..+..++.+.|.. |+...+.. .++....+.||+++.+.+
T Consensus 142 PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~hs~t-~~L~~~~~~ADIVI~Avg 213 (285)
T 3l07_A 142 SCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKAT---VTTCHRFT-TDLKSHTTKADILIVAVG 213 (285)
T ss_dssp CHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECTTC-SSHHHHHTTCSEEEECCC
T ss_pred CCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe---EEEEeCCc-hhHHHhcccCCEEEECCC
Confidence 33444555666654 4678999996542223455556665653 77776543 356667789999997653
No 267
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=24.25 E-value=80 Score=25.81 Aligned_cols=73 Identities=18% Similarity=0.146 Sum_probs=42.4
Q ss_pred CCCcEEEEEcCCccc-------HHHHHHHHHHcC-CCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCc-----hHHH
Q psy15362 80 VPNSILWLLKFPAVG-------EANIQATAQALG-LDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGH-----TTSM 146 (200)
Q Consensus 80 ~p~~~l~ivG~~~~~-------~~~l~~~~~~~g-l~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g-----~~~l 146 (200)
.++.+++-+.+.... .+.+....++.| +. +. .+ +..++.. -...|++++..+..++ ..+.
T Consensus 32 g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~-~~-~~----d~~e~l~-~~~iDvVVe~T~~~~~~~pa~~~~~ 104 (325)
T 3ing_A 32 AFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRIS-DR-AF----SGPEDLM-GEAADLLVDCTPASRDGVREYSLYR 104 (325)
T ss_dssp -CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSC-SS-BC----CSGGGGT-TSCCSEEEECCCCCSSSHHHHHHHH
T ss_pred CCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCC-cc-cC----CHHHHhc-CCCCCEEEECCCCccccchHHHHHH
Confidence 367777777653221 234444455555 43 32 11 3234332 1358999987764332 4589
Q ss_pred HHHHcCCCeeecC
Q psy15362 147 DVLWTGTPVVTLP 159 (200)
Q Consensus 147 EAma~G~PVV~~~ 159 (200)
+|+.+|+.||+.+
T Consensus 105 ~aL~aGkhVVtaN 117 (325)
T 3ing_A 105 MAFESGMNVVTAN 117 (325)
T ss_dssp HHHHTTCEEEECC
T ss_pred HHHHCCCeEEEcC
Confidence 9999999999853
No 268
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=24.18 E-value=3.1e+02 Score=22.80 Aligned_cols=78 Identities=15% Similarity=0.167 Sum_probs=37.7
Q ss_pred CcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCeeecCCCcc----hhhh-HHHHHhhcCCCc---ce
Q psy15362 110 HRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVVTLPGETL----ASRV-AASQLATLGCPE---LI 181 (200)
Q Consensus 110 ~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~g~~~----~~r~-~~~~~~~~g~~~---~i 181 (200)
++.+...+.+.+.+..+...+|+.+..+. .-...+++.+..- .++ .++... ..+. ...+++..|++- ..
T Consensus 77 d~~~~~~~~d~~~l~~~a~~~D~V~~~~e-~~~~~~~~~l~~~-~~v-gp~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~ 153 (419)
T 4e4t_A 77 DRHLRAAYDDEAALAELAGLCEAVSTEFE-NVPAASLDFLART-TFV-APAGRCVAVAQDRIAEKRFIEASGVPVAPHVV 153 (419)
T ss_dssp SEEECCCTTCHHHHHHHHHHCSEEEECCT-TCCHHHHHHHHTT-SEE-SSCHHHHHHHTCHHHHHHHHHHTTCCBCCEEE
T ss_pred CEEEECCcCCHHHHHHHHhcCCEEEEccC-cCCHHHHHHHHcc-CCc-CCCHHHHHHhcCHHHHHHHHHHcCcCCCCeEE
Confidence 44444444445566666667888874331 1234566666554 222 222111 1111 234566777762 34
Q ss_pred ecCHHHHHH
Q psy15362 182 ARTHKEYQD 190 (200)
Q Consensus 182 a~~~~~yv~ 190 (200)
..+.++..+
T Consensus 154 v~~~~e~~~ 162 (419)
T 4e4t_A 154 IESAAALAA 162 (419)
T ss_dssp ECSHHHHHT
T ss_pred ECCHHHHHH
Confidence 466665543
No 269
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=24.16 E-value=1.5e+02 Score=23.90 Aligned_cols=64 Identities=13% Similarity=0.131 Sum_probs=37.8
Q ss_pred CEEEEEeCCCCCC---CHH--------HHHHHHHHHHHCCCcEEEEEcCCcccHHHHHH----HHHHcCC-CCCcEEEec
Q psy15362 53 AIVYCNFNQLYKI---DPS--------TLQMWVNVLKAVPNSILWLLKFPAVGEANIQA----TAQALGL-DQHRILFSN 116 (200)
Q Consensus 53 ~~v~~~~~r~~K~---~~~--------~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~----~~~~~gl-~~~rv~f~g 116 (200)
.+++.+.+.++|- -.+ +.+....+.+..|++.+++++. |- +.+-. ..+..|+ +++||+=++
T Consensus 71 Divii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN--Pv-d~~t~~a~~~~k~sg~~p~~rv~G~~ 147 (312)
T 3hhp_A 71 DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN--PV-NTTVAIAAEVLKKAGVYDKNKLFGVT 147 (312)
T ss_dssp SEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS--CH-HHHHHHHHHHHHHTTCCCTTSEEECC
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC--cc-hhHHHHHHHHHHHcCCCCcceEEEEe
Confidence 4676677766542 122 2233345667789999999874 32 22222 3455677 668888787
Q ss_pred cCC
Q psy15362 117 VAA 119 (200)
Q Consensus 117 ~~~ 119 (200)
.++
T Consensus 148 ~LD 150 (312)
T 3hhp_A 148 TLD 150 (312)
T ss_dssp HHH
T ss_pred chh
Confidence 543
No 270
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=23.85 E-value=1.6e+02 Score=23.78 Aligned_cols=69 Identities=12% Similarity=0.052 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHHHHC----CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCC
Q psy15362 66 DPSTLQMWVNVLKAV----PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL 138 (200)
Q Consensus 66 ~~~~l~a~~~i~~~~----p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~ 138 (200)
.+-.-.++.++++++ .+.+.+++|.++.--.-+..++.+.|.. |+...+.. .++..+.+.||+++.+.+
T Consensus 140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt---Vtv~h~~t-~~L~~~~~~ADIVI~Avg 212 (285)
T 3p2o_A 140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGAT---VSVCHIKT-KDLSLYTRQADLIIVAAG 212 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECTTC-SCHHHHHTTCSEEEECSS
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCCc-hhHHHHhhcCCEEEECCC
Confidence 344555556666665 4679999996542223355555555653 77776654 356667789999997653
No 271
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=23.80 E-value=1.1e+02 Score=26.35 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=22.6
Q ss_pred CCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEec
Q psy15362 80 VPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSN 116 (200)
Q Consensus 80 ~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g 116 (200)
..+.+++++|.|+... .+-..+.++|+...+|++..
T Consensus 184 l~~~rvlvlGAGgAg~-aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 184 ISEITLALFGAGAAGF-ATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTTCCEEEECCSHHHH-HHHHHHHHTTCCGGGEEEEE
T ss_pred ccCCEEEEECccHHHH-HHHHHHHHcCCCcCeEEEEE
Confidence 3578899999754433 34455556687334677665
No 272
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=23.78 E-value=2.8e+02 Score=22.17 Aligned_cols=65 Identities=6% Similarity=-0.011 Sum_probs=39.1
Q ss_pred CCCEEEEEeCCCCCCC-----------HHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHH----HHHHHc-CCCCCcEEE
Q psy15362 51 EDAIVYCNFNQLYKID-----------PSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQ----ATAQAL-GLDQHRILF 114 (200)
Q Consensus 51 ~~~~v~~~~~r~~K~~-----------~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~----~~~~~~-gl~~~rv~f 114 (200)
.-.++|.+.+.+.|.- +.+.+....+.+..|+++++++.. |- +.+- +.+++. ++.++||+.
T Consensus 68 ~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN--Pv-~~~~~i~~~~~~~~~~~p~~rvig 144 (314)
T 1mld_A 68 GCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN--PV-NSTIPITAEVFKKHGVYNPNKIFG 144 (314)
T ss_dssp TCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS--CH-HHHHHHHHHHHHHTTCCCTTSEEE
T ss_pred CCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC--Cc-chhHHHHHHHHHHcCCCCcceEEE
Confidence 4457777776654421 334445556777789999999853 42 2222 334444 476688888
Q ss_pred eccC
Q psy15362 115 SNVA 118 (200)
Q Consensus 115 ~g~~ 118 (200)
+..+
T Consensus 145 ~t~L 148 (314)
T 1mld_A 145 VTTL 148 (314)
T ss_dssp CCHH
T ss_pred eecc
Confidence 7554
No 273
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=23.72 E-value=61 Score=25.95 Aligned_cols=68 Identities=15% Similarity=0.091 Sum_probs=37.7
Q ss_pred HHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCC
Q psy15362 76 VLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTP 154 (200)
Q Consensus 76 i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~P 154 (200)
.+.+.|+..++-+.+.. .+..++ .|+. +.. .+++... ..+|+++.+.|... .-.+.+++.+|++
T Consensus 27 ~l~~~~~~elvav~d~~--~~~~~~----~g~~-----~~~---~~~l~~~-~~~DvViiatp~~~h~~~~~~al~aG~~ 91 (304)
T 3bio_A 27 ALREAPDFEIAGIVRRN--PAEVPF----ELQP-----FRV---VSDIEQL-ESVDVALVCSPSREVERTALEILKKGIC 91 (304)
T ss_dssp HHHHCTTEEEEEEECC-------------CCTT-----SCE---ESSGGGS-SSCCEEEECSCHHHHHHHHHHHHTTTCE
T ss_pred HHhcCCCCEEEEEEcCC--HHHHHH----cCCC-----cCC---HHHHHhC-CCCCEEEECCCchhhHHHHHHHHHcCCe
Confidence 34457888887544422 223322 4542 111 2334433 67899987765332 3457789999999
Q ss_pred eeec
Q psy15362 155 VVTL 158 (200)
Q Consensus 155 VV~~ 158 (200)
||..
T Consensus 92 Vi~e 95 (304)
T 3bio_A 92 TADS 95 (304)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9974
No 274
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=23.48 E-value=1.1e+02 Score=23.91 Aligned_cols=55 Identities=15% Similarity=0.074 Sum_probs=32.4
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCC--------------HHHHHhhcccccEEEeCCCC
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAA--------------KEEHVRRGQLADVCLDTPLC 139 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~--------------~~~~~~~~~~aDv~l~~~~~ 139 (200)
.+ +++++|.|+..+..+..+. +.|. .+|++..+.+ .++.......+|+++.+.|.
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~-~~G~--~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~ 176 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALL-QMGV--KDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSV 176 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHH-HTTC--CCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSST
T ss_pred CC-eEEEECcHHHHHHHHHHHH-HcCC--CEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCC
Confidence 45 7888887554444444444 4576 4577666542 12233345678999976653
No 275
>1vmi_A Putative phosphate acetyltransferase; NP_416953.1, structura genomics, JCSG, protein structure initiative, PSI, joint CE structural genomics; 2.32A {Escherichia coli} SCOP: c.77.1.5
Probab=23.43 E-value=1.7e+02 Score=24.21 Aligned_cols=46 Identities=9% Similarity=-0.013 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEecc
Q psy15362 67 PSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNV 117 (200)
Q Consensus 67 ~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~ 117 (200)
+..++++.+..+.. .++.+++|+ .+.+++.++++|++.+++.+...
T Consensus 37 e~vl~Aa~~~~~~~-~~~piLvG~----~~~I~~~~~~~gl~~~~~~ii~~ 82 (355)
T 1vmi_A 37 QRVLKAAQYLHQQG-LATPILVAN----PFELRQFALSHGVAMDGLQVIDP 82 (355)
T ss_dssp HHHHHHHHHHHHTT-SCEEEEESC----HHHHHHHHHHHTCCCTTCEEECT
T ss_pred HHHHHHHHHHHHhC-CCEEEEEEC----HHHHHHHHHHcCCCcCCeEEECC
Confidence 77899988876654 789999985 47888888988886346776643
No 276
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=23.32 E-value=2.3e+02 Score=22.91 Aligned_cols=68 Identities=13% Similarity=0.047 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHC----CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHH--hhcccccEEEeCCC
Q psy15362 67 PSTLQMWVNVLKAV----PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHV--RRGQLADVCLDTPL 138 (200)
Q Consensus 67 ~~~l~a~~~i~~~~----p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~--~~~~~aDv~l~~~~ 138 (200)
+-.-.++.++++++ .+.+.+++|.++.--..+..++.+.|.+ |+...+.. .++. ...+.||+++...+
T Consensus 146 PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~~~~T-~~l~l~~~~~~ADIVI~Avg 219 (300)
T 4a26_A 146 PCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENAT---VTIVHSGT-STEDMIDYLRTADIVIAAMG 219 (300)
T ss_dssp CHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECTTS-CHHHHHHHHHTCSEEEECSC
T ss_pred CCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCCC-CCchhhhhhccCCEEEECCC
Confidence 44445555566553 4679999996542223355555555653 77777643 2444 67789999997654
No 277
>2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP}
Probab=23.19 E-value=1.2e+02 Score=22.98 Aligned_cols=41 Identities=22% Similarity=0.170 Sum_probs=27.8
Q ss_pred CCCHHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHc
Q psy15362 64 KIDPSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQAL 105 (200)
Q Consensus 64 K~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~ 105 (200)
.+...+.+.+....++.|+.+++++|.. .....+-..+..+
T Consensus 58 ~G~~~~~~~i~~~~~~CP~tkivl~GYS-QGA~V~~~~~~~l 98 (205)
T 2czq_A 58 AGTADIIRRINSGLAANPNVCYILQGYS-QGAAATVVALQQL 98 (205)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEET-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEeeC-chhHHHHHHHHhc
Confidence 4456677777778889999999999974 3333334444444
No 278
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=23.17 E-value=82 Score=23.71 Aligned_cols=39 Identities=18% Similarity=0.170 Sum_probs=22.5
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHH
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKE 121 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~ 121 (200)
+..+++.|. ....+.+++.++++|+..++|++-.+-+..
T Consensus 201 ~~~vyvCGp-~~m~~~v~~~l~~~g~~~~~i~~E~F~~~~ 239 (243)
T 4eh1_A 201 DGDFYLCGP-IGFMQYVVKQLLALGVDKARIHYEVFGPHA 239 (243)
T ss_dssp TCEEEEEEC-HHHHHHHHHHHHHHTCCGGGEEEEECCC--
T ss_pred CcEEEEECC-HHHHHHHHHHHHHcCCCHHHEEEeccCCch
Confidence 345555553 234455666677777766777776665543
No 279
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=22.91 E-value=1e+02 Score=25.01 Aligned_cols=64 Identities=9% Similarity=0.029 Sum_probs=33.9
Q ss_pred CEEEEEeCCCCCC---CHH--------HHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEec-cC
Q psy15362 53 AIVYCNFNQLYKI---DPS--------TLQMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSN-VA 118 (200)
Q Consensus 53 ~~v~~~~~r~~K~---~~~--------~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g-~~ 118 (200)
.+++.+.+.++|- -.+ +.+....+.+..|++.+++++. |-.-.-.-..+..|++++||+=+| .+
T Consensus 71 DvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN--Pvd~~t~~~~k~~g~p~~rviG~~t~L 146 (314)
T 3nep_X 71 DVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN--PLDVMTYVAYEASGFPTNRVMGMAGVL 146 (314)
T ss_dssp SEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS--SHHHHHHHHHHHHTCCGGGEEECCHHH
T ss_pred CEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC--chhHHHHHHHHhcCCChHHEEeecCch
Confidence 4777777665442 122 2233345566679999999874 322211112233477667887776 44
No 280
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=22.78 E-value=64 Score=25.69 Aligned_cols=69 Identities=10% Similarity=0.096 Sum_probs=39.0
Q ss_pred HHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCC-chHHHHHHHcCCCee
Q psy15362 78 KAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNG-HTTSMDVLWTGTPVV 156 (200)
Q Consensus 78 ~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~-g~~~lEAma~G~PVV 156 (200)
.+.|+.+++.+.+. ..+..++ +. +++.. +-+.+++.. -..+|+++.+.|... .-.+.+|+..|++|+
T Consensus 30 ~~~~~~~~v~v~d~--~~~~~~~------~~-~~~~~--~~~~~~~l~-~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~ 97 (315)
T 3c1a_A 30 AGLPGAALVRLASS--NPDNLAL------VP-PGCVI--ESDWRSVVS-APEVEAVIIATPPATHAEITLAAIASGKAVL 97 (315)
T ss_dssp HHCTTEEEEEEEES--CHHHHTT------CC-TTCEE--ESSTHHHHT-CTTCCEEEEESCGGGHHHHHHHHHHTTCEEE
T ss_pred HhCCCcEEEEEEeC--CHHHHHH------HH-hhCcc--cCCHHHHhh-CCCCCEEEEeCChHHHHHHHHHHHHCCCcEE
Confidence 34678887766542 2333332 22 22222 223345432 126899977665433 456778899999998
Q ss_pred ec
Q psy15362 157 TL 158 (200)
Q Consensus 157 ~~ 158 (200)
+-
T Consensus 98 ~e 99 (315)
T 3c1a_A 98 VE 99 (315)
T ss_dssp EE
T ss_pred Ec
Confidence 74
No 281
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=22.73 E-value=2.4e+02 Score=22.97 Aligned_cols=6 Identities=17% Similarity=0.446 Sum_probs=3.3
Q ss_pred cCCCee
Q psy15362 151 TGTPVV 156 (200)
Q Consensus 151 ~G~PVV 156 (200)
..+|..
T Consensus 157 ~~LPl~ 162 (330)
T 1fjm_A 157 NCLPIA 162 (330)
T ss_dssp TTCCCE
T ss_pred HhCCce
Confidence 456664
No 282
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=22.50 E-value=86 Score=24.94 Aligned_cols=32 Identities=16% Similarity=0.113 Sum_probs=24.2
Q ss_pred ccccEEEeCCCCCCchHHHHHHHcCCCeeecC
Q psy15362 128 QLADVCLDTPLCNGHTTSMDVLWTGTPVVTLP 159 (200)
Q Consensus 128 ~~aDv~l~~~~~~~g~~~lEAma~G~PVV~~~ 159 (200)
..=|+++..-+......+.||...|+|||+..
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaiv 188 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALA 188 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECC
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEe
Confidence 34577765555555688999999999999864
No 283
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=22.32 E-value=2.1e+02 Score=20.89 Aligned_cols=49 Identities=12% Similarity=-0.067 Sum_probs=24.5
Q ss_pred HHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceecCHHHHHHHH
Q psy15362 144 TSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIA 192 (200)
Q Consensus 144 ~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~~~~~yv~~a 192 (200)
=+.-|-++|.+++........+.....-+.....++++.++-.++.+..
T Consensus 202 Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 202 DLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp HHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred hHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 3555667899888653110000000000001234567888888877654
No 284
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=22.26 E-value=2.1e+02 Score=22.84 Aligned_cols=66 Identities=8% Similarity=-0.000 Sum_probs=37.4
Q ss_pred CCCEEEEEeCCCCCC-C--HH--------HHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHH-HHHcCCCCCcEEEec-c
Q psy15362 51 EDAIVYCNFNQLYKI-D--PS--------TLQMWVNVLKAVPNSILWLLKFPAVGEANIQAT-AQALGLDQHRILFSN-V 117 (200)
Q Consensus 51 ~~~~v~~~~~r~~K~-~--~~--------~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~-~~~~gl~~~rv~f~g-~ 117 (200)
.-.+++.+.+.+.|- . .+ +.+....+.+..|++.+++++. |- +.+-.. .+..|+.++||+=+| .
T Consensus 69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN--Pv-d~~t~~~~k~~g~p~~rviG~gt~ 145 (294)
T 1oju_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN--PM-DVMTYIMWKESGKPRNEVFGMGNQ 145 (294)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS--SH-HHHHHHHHHHSCCCTTSEEECSHH
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC--cc-hHHHHHHHHhcCCCHHHEeecccc
Confidence 335676667665542 1 12 2233345666789999999974 32 223222 334577668887775 3
Q ss_pred CC
Q psy15362 118 AA 119 (200)
Q Consensus 118 ~~ 119 (200)
++
T Consensus 146 LD 147 (294)
T 1oju_A 146 LD 147 (294)
T ss_dssp HH
T ss_pred cH
Confidence 43
No 285
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=22.24 E-value=1.6e+02 Score=22.74 Aligned_cols=66 Identities=14% Similarity=0.077 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCCC--CCcEEEeccCCHHHHHhhcc-cccEE-EeCCCCCCchHHHHHHHc---CCCeeecCCC
Q psy15362 96 ANIQATAQALGLD--QHRILFSNVAAKEEHVRRGQ-LADVC-LDTPLCNGHTTSMDVLWT---GTPVVTLPGE 161 (200)
Q Consensus 96 ~~l~~~~~~~gl~--~~rv~f~g~~~~~~~~~~~~-~aDv~-l~~~~~~~g~~~lEAma~---G~PVV~~~g~ 161 (200)
+++-+.++++|++ -.-..+-|-...+|....+. .+|++ +.|....+|...+-++.. .+|++.+-|-
T Consensus 96 ~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~i~~~ptGGI 168 (217)
T 3lab_A 96 PELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQAGITQLKCFPASAIGGAKLLKAWSGPFPDIQFCPTGGI 168 (217)
T ss_dssp HHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEEEEBSSC
T ss_pred HHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHcCCCEEEECccccccCHHHHHHHHhhhcCceEEEeCCC
Confidence 3455556665551 01146677666666665543 37777 544332346778888775 4556666553
No 286
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=22.21 E-value=57 Score=23.98 Aligned_cols=36 Identities=17% Similarity=0.029 Sum_probs=23.7
Q ss_pred hcccccEEEeCCC--CCC-c--hHHHHHHHcCCCeeecCCC
Q psy15362 126 RGQLADVCLDTPL--CNG-H--TTSMDVLWTGTPVVTLPGE 161 (200)
Q Consensus 126 ~~~~aDv~l~~~~--~~~-g--~~~lEAma~G~PVV~~~g~ 161 (200)
.+..||+++.-.. ... | .-+-=|.+.|+||+....+
T Consensus 66 ~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~~D 106 (162)
T 3ehd_A 66 NVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTD 106 (162)
T ss_dssp HHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEcC
Confidence 4788999875332 112 3 3366688999999986443
No 287
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=22.18 E-value=1.8e+02 Score=23.57 Aligned_cols=63 Identities=14% Similarity=0.076 Sum_probs=35.2
Q ss_pred CCCEEEEEeCCCCCC----C-------HHHHHHHHHHHHHCCCcEEEEEcCCcccHHHHHHH-HHHcCCCCCcEEEec
Q psy15362 51 EDAIVYCNFNQLYKI----D-------PSTLQMWVNVLKAVPNSILWLLKFPAVGEANIQAT-AQALGLDQHRILFSN 116 (200)
Q Consensus 51 ~~~~v~~~~~r~~K~----~-------~~~l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~-~~~~gl~~~rv~f~g 116 (200)
.-.+++.+.+.+.|- . +.+.+....+.+..|++.+++++. |. +.+-.. .+..|+.++||+=++
T Consensus 75 ~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN--Pv-d~~t~~~~k~sg~p~~rviG~~ 149 (324)
T 3gvi_A 75 GADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN--PL-DAMVWALQKFSGLPAHKVVGMA 149 (324)
T ss_dssp TCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS--SH-HHHHHHHHHHHCCCGGGEEECC
T ss_pred CCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC--Cc-HHHHHHHHHhcCCCHHHEEeec
Confidence 335777777765442 1 223334455667789999999974 32 222222 223367657777666
No 288
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=22.08 E-value=1.9e+02 Score=20.91 Aligned_cols=53 Identities=11% Similarity=-0.046 Sum_probs=27.6
Q ss_pred hHHHHHHHcCCCeeecCCCcchhhhHHHHHhhcCCCcceecCHHHHHHHHHHh
Q psy15362 143 TTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPELIARTHKEYQDIAIRL 195 (200)
Q Consensus 143 ~~~lEAma~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~~~~~yv~~a~~l 195 (200)
+=+.-|.++|..++........+.....-+.....++++.++..++.+.....
T Consensus 197 ~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~~ 249 (254)
T 3umg_A 197 GDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRAG 249 (254)
T ss_dssp HHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHHC
T ss_pred HhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcCC
Confidence 33555777899988653211000000000001234568889999888776543
No 289
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=22.04 E-value=2.2e+02 Score=22.00 Aligned_cols=84 Identities=15% Similarity=0.143 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHCCCcEEEEEcCCc-ccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHH
Q psy15362 68 STLQMWVNVLKAVPNSILWLLKFPA-VGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSM 146 (200)
Q Consensus 68 ~~l~a~~~i~~~~p~~~l~ivG~~~-~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~l 146 (200)
.-++++.++.+++|+. ++|.+. ...++.+..++ .|-+ ++..+..+ .++..+.+..++.+.|--. ...-+.
T Consensus 71 ~a~e~I~~l~~~~~~~---~iGaGTVlt~~~a~~Ai~-AGA~---fIvsP~~~-~~vi~~~~~~gi~~ipGv~-TptEi~ 141 (232)
T 4e38_A 71 AAVEAIRLLRQAQPEM---LIGAGTILNGEQALAAKE-AGAT---FVVSPGFN-PNTVRACQEIGIDIVPGVN-NPSTVE 141 (232)
T ss_dssp THHHHHHHHHHHCTTC---EEEEECCCSHHHHHHHHH-HTCS---EEECSSCC-HHHHHHHHHHTCEEECEEC-SHHHHH
T ss_pred CHHHHHHHHHHhCCCC---EEeECCcCCHHHHHHHHH-cCCC---EEEeCCCC-HHHHHHHHHcCCCEEcCCC-CHHHHH
Confidence 3567777788888873 334322 33455555444 4654 66777665 4555555666777655211 234588
Q ss_pred HHHHcCCCeee-cCC
Q psy15362 147 DVLWTGTPVVT-LPG 160 (200)
Q Consensus 147 EAma~G~PVV~-~~g 160 (200)
.|+.+|.-+|- .+.
T Consensus 142 ~A~~~Gad~vK~FPa 156 (232)
T 4e38_A 142 AALEMGLTTLKFFPA 156 (232)
T ss_dssp HHHHTTCCEEEECST
T ss_pred HHHHcCCCEEEECcC
Confidence 89999999995 443
No 290
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=22.02 E-value=3.1e+02 Score=22.07 Aligned_cols=107 Identities=6% Similarity=0.057 Sum_probs=58.5
Q ss_pred CCCCCEEEEEeCCCCC---CCHHHHHHHHHHHHHCCCcEEEEEcCCccc-H----HHHHHHHHHcCCCCCcEEEeccCCH
Q psy15362 49 LPEDAIVYCNFNQLYK---IDPSTLQMWVNVLKAVPNSILWLLKFPAVG-E----ANIQATAQALGLDQHRILFSNVAAK 120 (200)
Q Consensus 49 l~~~~~v~~~~~r~~K---~~~~~l~a~~~i~~~~p~~~l~ivG~~~~~-~----~~l~~~~~~~gl~~~rv~f~g~~~~ 120 (200)
++. ..++.+-+.... ....+++.+.+..+...+.+++++..+... . +.+.+.+.+.|+. -.+.-+...+.
T Consensus 217 l~~-~~i~p~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g~~-v~~~~~~~~~~ 294 (402)
T 1e5d_A 217 VAP-EFICPDHGVIFRGADQCTFAVQKYVEYAEQKPTNKVVIFYDSMWHSTEKMARVLAESFRDEGCT-VKLMWCKACHH 294 (402)
T ss_dssp CCC-SEEEESSSCBEESHHHHHHHHHHHHHHHHCCCCSEEEEEECCSSSHHHHHHHHHHHHHHHTTCE-EEEEETTTSCH
T ss_pred CCc-CEEecCCcceeecCCCHHHHHHHHHHHhcCCCCCcEEEEEECCChhHHHHHHHHHHHHHhCCCe-EEEEECCCCCH
Confidence 554 456555555543 345666766666665556777777653222 1 2333444444553 23333444445
Q ss_pred HHHHhhcccccEEEeCCC-CCCc-----hHHHHHHH----cCCCeee
Q psy15362 121 EEHVRRGQLADVCLDTPL-CNGH-----TTSMDVLW----TGTPVVT 157 (200)
Q Consensus 121 ~~~~~~~~~aDv~l~~~~-~~~g-----~~~lEAma----~G~PVV~ 157 (200)
.++..-+..+|.++..+| +.++ ...++.+. .|++++.
T Consensus 295 ~~~~~~~~~~d~ii~gsp~~~~~~~~~~~~~l~~l~~~~l~~k~~~~ 341 (402)
T 1e5d_A 295 SQIMSEISDAGAVIVGSPTHNNGILPYVAGTLQYIKGLRPQNKIGGA 341 (402)
T ss_dssp HHHHHHHHTCSEEEEECCCBTTBCCHHHHHHHHHHHHTCCCSCEEEE
T ss_pred HHHHHHHHHCCEEEEECCccCCCchHHHHHHHHHhhhcccCCCEEEE
Confidence 666555678999976654 4443 12455543 4888874
No 291
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=21.98 E-value=2.8e+02 Score=22.32 Aligned_cols=7 Identities=29% Similarity=0.444 Sum_probs=3.1
Q ss_pred CcEEEec
Q psy15362 110 HRILFSN 116 (200)
Q Consensus 110 ~rv~f~g 116 (200)
++++|+|
T Consensus 78 ~~~vflG 84 (309)
T 2ie4_C 78 TNYLFMG 84 (309)
T ss_dssp SCEEECS
T ss_pred CEEEEeC
Confidence 3444444
No 292
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=21.88 E-value=3.1e+02 Score=22.00 Aligned_cols=68 Identities=9% Similarity=-0.008 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHC----CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCC
Q psy15362 67 PSTLQMWVNVLKAV----PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL 138 (200)
Q Consensus 67 ~~~l~a~~~i~~~~----p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~ 138 (200)
+-.-.++.++++++ .+.+.+++|.++.--..+..++.+.|. .|+...+.. .++....+.||+++.+.+
T Consensus 142 PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gA---tVtv~hs~T-~~L~~~~~~ADIVI~Avg 213 (286)
T 4a5o_A 142 PCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGC---TVTVTHRFT-RDLADHVSRADLVVVAAG 213 (286)
T ss_dssp CHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTC---EEEEECTTC-SCHHHHHHTCSEEEECCC
T ss_pred CCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC---eEEEEeCCC-cCHHHHhccCCEEEECCC
Confidence 33445556667665 467999999654222345555665564 377776543 345566789999997653
No 293
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=21.82 E-value=1.6e+02 Score=23.99 Aligned_cols=68 Identities=7% Similarity=-0.021 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHC----CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCC
Q psy15362 67 PSTLQMWVNVLKAV----PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPL 138 (200)
Q Consensus 67 ~~~l~a~~~i~~~~----p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~ 138 (200)
|=.-.+..++++++ ...+.+++|.+..--..+..++.+.|- .|+...+.. .++....+.||+++....
T Consensus 146 PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA---tVtv~hs~t-~~L~~~~~~ADIVI~Avg 217 (301)
T 1a4i_A 146 PCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA---TVTTCHSKT-AHLDEEVNKGDILVVATG 217 (301)
T ss_dssp CHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC---EEEEECTTC-SSHHHHHTTCSEEEECCC
T ss_pred CchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCC---eEEEEECCc-ccHHHHhccCCEEEECCC
Confidence 44556666676654 478999999753212335555555553 477776554 466677889999997653
No 294
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=21.78 E-value=2.5e+02 Score=20.87 Aligned_cols=109 Identities=12% Similarity=0.105 Sum_probs=60.0
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc--ccccEEE-eCC-CCCCchHHHHHHH---cCC
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVCL-DTP-LCNGHTTSMDVLW---TGT 153 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~--~~aDv~l-~~~-~~~~g~~~lEAma---~G~ 153 (200)
+..+++++.+.......++...++.|.. |... .+.++....+ ...|+++ |-. |...|..+++.+. ..+
T Consensus 22 ~~~~ILivdd~~~~~~~l~~~L~~~g~~---v~~~--~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~ 96 (250)
T 3r0j_A 22 PEARVLVVDDEANIVELLSVSLKFQGFE---VYTA--TNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDA 96 (250)
T ss_dssp SSCEEEEECSCHHHHHHHHHHHHHTTCE---EEEE--SSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCC
T ss_pred CCceEEEEECCHHHHHHHHHHHHHCCCE---EEEE--CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCC
Confidence 4578888865433345677777776653 4432 2334444433 2468775 432 4345777777665 368
Q ss_pred CeeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhh
Q psy15362 154 PVVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG 196 (200)
Q Consensus 154 PVV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~ 196 (200)
|||...+..-..... -.-..|..+++.. +.+++.+...+++
T Consensus 97 ~ii~lt~~~~~~~~~--~~~~~Ga~~yl~Kp~~~~~L~~~i~~~~ 139 (250)
T 3r0j_A 97 PALFLTARDSLQDKI--AGLTLGGDDYVTKPFSLEEVVARLRVIL 139 (250)
T ss_dssp CEEEEECSTTHHHHH--HHHTSTTCEEEESSCCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHH--HHHHcCCcEEEeCCCCHHHHHHHHHHHH
Confidence 998754432211111 1124577777763 6677766655543
No 295
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=21.70 E-value=83 Score=25.23 Aligned_cols=26 Identities=8% Similarity=-0.059 Sum_probs=17.2
Q ss_pred cccEEEeCCCCCC-chHHHHHHHcCCC
Q psy15362 129 LADVCLDTPLCNG-HTTSMDVLWTGTP 154 (200)
Q Consensus 129 ~aDv~l~~~~~~~-g~~~lEAma~G~P 154 (200)
.+|+.+...|-.. .-.+.||...|++
T Consensus 70 ~~Dv~ii~vp~~~~~~~v~ea~~~Gi~ 96 (294)
T 2yv1_A 70 DANASVIFVPAPFAKDAVFEAIDAGIE 96 (294)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEccCHHHHHHHHHHHHHCCCC
Confidence 5787776554332 4557778888888
No 296
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=21.63 E-value=2.6e+02 Score=21.05 Aligned_cols=108 Identities=10% Similarity=0.087 Sum_probs=60.6
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc--ccccEEEeC--CCCCCchHHHHHHH---cCCC
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVCLDT--PLCNGHTTSMDVLW---TGTP 154 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~--~~aDv~l~~--~~~~~g~~~lEAma---~G~P 154 (200)
+.+++++.+.......+++..++.|.. |...... .+....+ ...|+++.- .|...|..+++.+. ..+|
T Consensus 129 ~~~ILivdd~~~~~~~l~~~L~~~g~~---v~~a~~~--~eal~~l~~~~~dlvl~D~~mp~~~G~~l~~~ir~~~~~~p 203 (254)
T 2ayx_A 129 DMMILVVDDHPINRRLLADQLGSLGYQ---CKTANDG--VDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLP 203 (254)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHHTSE---EEEECCS--HHHHHHHHHSCCSEEEEEESSCSSCCHHHHHHHHHHHCCSC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCE---EEEECCH--HHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhcCCCCc
Confidence 357888876433456677888887874 5544433 3333333 246887532 24334666666553 5799
Q ss_pred eeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhh
Q psy15362 155 VVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG 196 (200)
Q Consensus 155 VV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~ 196 (200)
||...+........ -....|..+++.. +.+++.+...++.
T Consensus 204 iI~lt~~~~~~~~~--~~~~~G~~~~l~KP~~~~~L~~~l~~~~ 245 (254)
T 2ayx_A 204 VIGVTANALAEEKQ--RCLESGMDSCLSKPVTLDVIKQTLTLYA 245 (254)
T ss_dssp EEEEESSTTSHHHH--HHHHCCCEEEEESSCCHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHH--HHHHcCCceEEECCCCHHHHHHHHHHHH
Confidence 99765433222111 1234577777763 6667666555443
No 297
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=21.52 E-value=1.9e+02 Score=19.39 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=56.9
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc--cccEEE-eCC-CCCCchHHHHHHH---cCCC
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCL-DTP-LCNGHTTSMDVLW---TGTP 154 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~--~aDv~l-~~~-~~~~g~~~lEAma---~G~P 154 (200)
..+++++.+.......+++.+.+.|.. |... .+.++....+. ..|+++ +.. +...|..+++.+. ..+|
T Consensus 3 ~~~ILivdd~~~~~~~l~~~L~~~g~~---v~~~--~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~p 77 (155)
T 1qkk_A 3 APSVFLIDDDRDLRKAMQQTLELAGFT---VSSF--ASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLP 77 (155)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTCE---EEEE--SCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCcE---EEEE--CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCC
Confidence 356778875433456677788877763 4433 23355555443 368775 432 3234666666654 4789
Q ss_pred eeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHH
Q psy15362 155 VVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIR 194 (200)
Q Consensus 155 VV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~ 194 (200)
+|...+..-..... -....|..+++.. +.+++.....+
T Consensus 78 ii~ls~~~~~~~~~--~~~~~g~~~~l~kP~~~~~L~~~i~~ 117 (155)
T 1qkk_A 78 MILVTGHGDIPMAV--QAIQDGAYDFIAKPFAADRLVQSARR 117 (155)
T ss_dssp EEEEECGGGHHHHH--HHHHTTCCEEEESSCCHHHHHHHHHH
T ss_pred EEEEECCCChHHHH--HHHhcCCCeEEeCCCCHHHHHHHHHH
Confidence 99765432211111 1224577776653 55555554433
No 298
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=21.51 E-value=3.2e+02 Score=23.21 Aligned_cols=98 Identities=12% Similarity=0.079 Sum_probs=51.7
Q ss_pred HHHHHHHHcCCCCCcEEEeccCC---HHHHHhhccc---ccEEEe-CCCCCCc---hHHHHHHHcCCCeeec-CCCcchh
Q psy15362 97 NIQATAQALGLDQHRILFSNVAA---KEEHVRRGQL---ADVCLD-TPLCNGH---TTSMDVLWTGTPVVTL-PGETLAS 165 (200)
Q Consensus 97 ~l~~~~~~~gl~~~rv~f~g~~~---~~~~~~~~~~---aDv~l~-~~~~~~g---~~~lEAma~G~PVV~~-~g~~~~~ 165 (200)
.+-.++.+.|+.-.+++=+|..+ ..|+..++.. -++.+. -=....| +...+..+.++|||+. .|.+..+
T Consensus 164 ~~~~~~~~~g~G~s~~vs~G~~~~~~~~d~l~~~~~D~~t~~I~l~~E~i~~~~~f~~~a~~~~~~KPVv~~k~G~~~~g 243 (457)
T 2csu_A 164 GIVYKTIKEDIGFSKFISVGNMADVDFAELMEYLADTEEDKAIALYIEGVRNGKKFMEVAKRVTKKKPIIALKAGKSESG 243 (457)
T ss_dssp HHHHHHHHTTCEESEEEECTTCCSSCHHHHHHHHTTCSSCCEEEEEESCCSCHHHHHHHHHHHHHHSCEEEEECC-----
T ss_pred HHHHHHHhcCCCeeEEEECCCcCCCCHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHHHHHhcCCCCEEEEEcCCCccc
Confidence 45567777777556777777654 4677776633 233321 1111223 4466666789999985 4543221
Q ss_pred ------hhH---------HHHHhhcCCCcceecCHHHHHHHHHHhh
Q psy15362 166 ------RVA---------ASQLATLGCPELIARTHKEYQDIAIRLG 196 (200)
Q Consensus 166 ------r~~---------~~~~~~~g~~~~ia~~~~~yv~~a~~l~ 196 (200)
+.| .+.+++.|+ ...++.+++.+.+..|.
T Consensus 244 ~~aa~~Htgalag~~~~~~AafRqaGv--~~v~~~~El~~~~~~l~ 287 (457)
T 2csu_A 244 ARAASSHTGSLAGSWKIYEAAFKQSGV--LVANTIDEMLSMARAFS 287 (457)
T ss_dssp -------------CHHHHHHHHHHTTC--EEESSHHHHHHHHTTTT
T ss_pred cchhhcccCccCCcHHHHHHHHHhCCC--eEECCHHHHHHHHHHhc
Confidence 111 234555565 34567777666554443
No 299
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=21.50 E-value=2.2e+02 Score=23.00 Aligned_cols=63 Identities=14% Similarity=0.140 Sum_probs=35.9
Q ss_pred CCCEEEEEeCCCCCC-C--HHH--------HHHHHHHHHHCCCcEEEEEcCCcccHHHHHH-HHHHcCCCCCcEEEec
Q psy15362 51 EDAIVYCNFNQLYKI-D--PST--------LQMWVNVLKAVPNSILWLLKFPAVGEANIQA-TAQALGLDQHRILFSN 116 (200)
Q Consensus 51 ~~~~v~~~~~r~~K~-~--~~~--------l~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~-~~~~~gl~~~rv~f~g 116 (200)
.-.+++.+.+.+.|- . .++ -+...++.+..|++.+++++. |. +.+-. ..+..|++++||+=+|
T Consensus 78 ~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN--Pv-d~~t~~~~k~sg~p~~rviG~g 152 (315)
T 3tl2_A 78 DSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN--PV-DAMTYSVFKEAGFPKERVIGQS 152 (315)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS--SH-HHHHHHHHHHHCCCGGGEEECC
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC--hH-HHHHHHHHHhcCCChHHEEeec
Confidence 345777777766542 1 222 233445667789999999874 32 22222 2233477657777664
No 300
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=21.44 E-value=2.3e+02 Score=22.83 Aligned_cols=10 Identities=30% Similarity=0.255 Sum_probs=5.0
Q ss_pred CCcEEEEEcC
Q psy15362 81 PNSILWLLKF 90 (200)
Q Consensus 81 p~~~l~ivG~ 90 (200)
|+.++++.|+
T Consensus 82 ~~~~~vfLGD 91 (299)
T 3e7a_A 82 PESNYLFLGD 91 (299)
T ss_dssp TSSCEEECSC
T ss_pred CCccEEeCCc
Confidence 3445555553
No 301
>1f2v_A COBH, precorrin-8X methylmutase; alpha-beta WIND, doubly wound sheet, isomerase; 2.10A {Pseudomonas denitrificans} SCOP: c.23.17.1 PDB: 1i1h_A*
Probab=21.24 E-value=2.7e+02 Score=21.47 Aligned_cols=81 Identities=11% Similarity=0.016 Sum_probs=40.3
Q ss_pred HHHHHHHHHCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEE--eccCCHHHHHhhcccccEEEeCCCCCCchHHHHH
Q psy15362 71 QMWVNVLKAVPNSILWLLKFPAVGEANIQATAQALGLDQHRILF--SNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDV 148 (200)
Q Consensus 71 ~a~~~i~~~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f--~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEA 148 (200)
.++....++.++ .++.+|..+...-+|.+++++-++.|.=|+= .|++.-.|-.. .|
T Consensus 128 aa~~~~~~~~~~-aIvaIGNAPTAL~~Lleli~~g~~~PalVIG~PVGFVgaaESKe-------------------~L-- 185 (219)
T 1f2v_A 128 AALKLWSERLAG-SVVAIGNAPTALFFLLEMLRDGAPKPAAILGMPVGFVGAAESKD-------------------AL-- 185 (219)
T ss_dssp HGGGGGHHHHTT-CEEEECSCHHHHHHHHHHHHTTCCCCSEEEECCCSSSSHHHHHH-------------------HH--
T ss_pred HHHHHHHHHcCC-cEEEEeCcHHHHHHHHHHHHcCCCCCCEEEEeCCCccCHHHHHH-------------------HH--
Confidence 333334455566 4666675433344566677665565333332 34554433222 11
Q ss_pred HHc--CCCeeecCCCcchhhhHHHHHh
Q psy15362 149 LWT--GTPVVTLPGETLASRVAASQLA 173 (200)
Q Consensus 149 ma~--G~PVV~~~g~~~~~r~~~~~~~ 173 (200)
+.+ ++|.|+..|..=-+-+.+++++
T Consensus 186 ~~~~~~vP~I~~~GrkGGS~vAaAivN 212 (219)
T 1f2v_A 186 AENSYGVPFAIVRGRLGGSAMTAAALN 212 (219)
T ss_dssp HHCCTTCCEEEECTTCCCHHHHHHHHH
T ss_pred HhCCCCCCEEEEeCCCCCHHHHHHHHH
Confidence 223 6888887664333344444444
No 302
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=21.19 E-value=39 Score=24.65 Aligned_cols=34 Identities=18% Similarity=-0.020 Sum_probs=23.3
Q ss_pred hcccccEEEeCC----CCCC-chHHHHHHHcCCCeeecC
Q psy15362 126 RGQLADVCLDTP----LCNG-HTTSMDVLWTGTPVVTLP 159 (200)
Q Consensus 126 ~~~~aDv~l~~~----~~~~-g~~~lEAma~G~PVV~~~ 159 (200)
.+..||++|.-. +..| ..-+-=|.|.|+|||+..
T Consensus 75 ~i~~aD~vvA~ldg~~~D~GT~~EiGyA~A~gkPVv~~~ 113 (157)
T 1f8y_A 75 GIKTNDIMLGVYIPDEEDVGLGMELGYALSQGKYVLLVI 113 (157)
T ss_dssp HHHTSSEEEEECCGGGCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhCCEEEEEcCCCCCCccHHHHHHHHHHCCCeEEEEE
Confidence 467899986332 2223 334777999999999864
No 303
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=21.16 E-value=75 Score=24.80 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=64.0
Q ss_pred HCCCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCH----HHHHhhc--ccccEEEeCCCCC--CchHHHH---
Q psy15362 79 AVPNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAK----EEHVRRG--QLADVCLDTPLCN--GHTTSMD--- 147 (200)
Q Consensus 79 ~~p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~----~~~~~~~--~~aDv~l~~~~~~--~g~~~lE--- 147 (200)
..++-++++..+ ...++.|.+..++.|...+.+...-.++. +++...+ ...|+++.+|+.+ .-...+.
T Consensus 138 ~~~g~~vLi~rg-~~~r~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~~~~d~v~ftS~s~v~~~~~~~~~~~ 216 (269)
T 3re1_A 138 AVPGSRVLIMRG-NEGRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLNGLVVSSGQGFEHLLQLAGDSW 216 (269)
T ss_dssp CSSSCEEEEEEC-SSCCCHHHHHHHHTTCEEEEEECEEEECCCCCTTTTHHHHHHTTCCEEECSSHHHHTTTHHHHGGGH
T ss_pred cCCCCEEEEEcc-CccHHHHHHHHHHCCCEEEEEeEEEEECCCCCHHHHHHHHHcCCCCEEEEcCHHHHHHHHHHhhHHH
Confidence 456667777653 24467788888888876444444433321 2222222 3579999888632 1111211
Q ss_pred HHHcCCCeeecCCCcchhhhHHHHHhhcCCCcce-e--cCHHHHHHHHHHhhc
Q psy15362 148 VLWTGTPVVTLPGETLASRVAASQLATLGCPELI-A--RTHKEYQDIAIRLGT 197 (200)
Q Consensus 148 Ama~G~PVV~~~g~~~~~r~~~~~~~~~g~~~~i-a--~~~~~yv~~a~~l~~ 197 (200)
....++++++. +...+.-++..|+...+ + .+.+++++.+.+..+
T Consensus 217 ~~l~~~~~~aI------G~~Ta~~l~~~G~~~~~va~~~t~~~l~~al~~~~~ 263 (269)
T 3re1_A 217 PDLAGLPLFVP------SPRVASLAQAAGARNVIDCRGASAAALLAALRDQPQ 263 (269)
T ss_dssp HHHTTSCEEES------SHHHHHHHHHHTCSSEEECSSSSHHHHHHHHHHSCC
T ss_pred HHHhCCeEEEE------CHHHHHHHHHCCCCceEECCCCCHHHHHHHHHHHhc
Confidence 12356777763 23344556677887654 4 577888888877653
No 304
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=21.12 E-value=79 Score=22.43 Aligned_cols=44 Identities=5% Similarity=-0.043 Sum_probs=28.7
Q ss_pred HHHHHHHHHCCCcEEEEEcCCcc---cHHHHHHHHHHcCCCCCcEEEecc
Q psy15362 71 QMWVNVLKAVPNSILWLLKFPAV---GEANIQATAQALGLDQHRILFSNV 117 (200)
Q Consensus 71 ~a~~~i~~~~p~~~l~ivG~~~~---~~~~l~~~~~~~gl~~~rv~f~g~ 117 (200)
+.+..++...|..-++++|.|.. -.+.+++.++++|+. |.....
T Consensus 56 e~l~~l~~~~p~pevliiGTG~~~~~l~p~l~~~l~~~GI~---vE~M~T 102 (135)
T 2fvt_A 56 YSLQRVFDNANAIDTLIVGTGADVWIAPRQLREALRGVNVV---LDTMQT 102 (135)
T ss_dssp TTTHHHHHTTTSCSEEEEECTTSCCCCCHHHHHHHHTTTCE---EEEECH
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCCCcCCHHHHHHHHHcCCE---EEEeCH
Confidence 34455566676677888886432 236788888888886 555443
No 305
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=21.10 E-value=2.1e+02 Score=23.79 Aligned_cols=50 Identities=12% Similarity=-0.014 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHCCC-----cEEEEEcCCcccHHHHHHHHHHcCCC-CCcEEEecc
Q psy15362 68 STLQMWVNVLKAVPN-----SILWLLKFPAVGEANIQATAQALGLD-QHRILFSNV 117 (200)
Q Consensus 68 ~~l~a~~~i~~~~p~-----~~l~ivG~~~~~~~~l~~~~~~~gl~-~~rv~f~g~ 117 (200)
.+++...+++.+.|+ .++.++|+=......+.++.+..|.. .++++|+|-
T Consensus 50 ~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD 105 (357)
T 3ll8_A 50 RIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGD 105 (357)
T ss_dssp HHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSC
T ss_pred HHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCC
Confidence 345555666666665 46667775222234555565554432 266777775
No 306
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=21.03 E-value=2.1e+02 Score=21.47 Aligned_cols=79 Identities=10% Similarity=0.022 Sum_probs=45.2
Q ss_pred CCCcEEEEEcCCc---c---cHHHHHHHHHHcCCCCCcEEEecc--CCHHHHHhhcccccEEEeCCCC---------CCc
Q psy15362 80 VPNSILWLLKFPA---V---GEANIQATAQALGLDQHRILFSNV--AAKEEHVRRGQLADVCLDTPLC---------NGH 142 (200)
Q Consensus 80 ~p~~~l~ivG~~~---~---~~~~l~~~~~~~gl~~~rv~f~g~--~~~~~~~~~~~~aDv~l~~~~~---------~~g 142 (200)
....+++++.... + ....+++.++++|.+ +..+.- .+.++....+..||.++.|--. ..|
T Consensus 25 ~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~---v~~~~i~~~~~~~~~~~l~~ad~I~l~GG~~~~l~~~L~~~g 101 (206)
T 3l4e_A 25 LQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLL---VEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKRTG 101 (206)
T ss_dssp CTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCE---EEECCTTTSCHHHHHHHHHHSSEEEECCSCHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCe---EEEEEecCCChHHHHHHHHhCCEEEECCCCHHHHHHHHHHCC
Confidence 3357788875311 1 124566777788874 444421 1345555667788988865310 001
Q ss_pred --hHHHHHHHcCCCeee-cCCC
Q psy15362 143 --TTSMDVLWTGTPVVT-LPGE 161 (200)
Q Consensus 143 --~~~lEAma~G~PVV~-~~g~ 161 (200)
..+-|+...|+|++. +.|.
T Consensus 102 l~~~l~~~~~~G~p~~G~sAGa 123 (206)
T 3l4e_A 102 ADKLILEEIAAGKLYIGESAGA 123 (206)
T ss_dssp HHHHHHHHHHTTCEEEEETHHH
T ss_pred hHHHHHHHHHcCCeEEEECHHH
Confidence 236677778999996 4443
No 307
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=20.81 E-value=2.1e+02 Score=22.72 Aligned_cols=56 Identities=13% Similarity=0.052 Sum_probs=32.2
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCH-------------------HHHHhhcccccEEEeCCCC
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAK-------------------EEHVRRGQLADVCLDTPLC 139 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~-------------------~~~~~~~~~aDv~l~~~~~ 139 (200)
.+.+.+++|.++..+.....+ .+.|. .+|++..+.+. +++...+..+|+++.+.+.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L-~~~G~--~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~ 214 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSL-LSTAA--ERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSV 214 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HTTTC--SEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCT
T ss_pred CCCEEEEECcHHHHHHHHHHH-HHCCC--CEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCC
Confidence 456788888754433333333 34565 45666665421 2333445678999987654
No 308
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=20.79 E-value=1.8e+02 Score=18.67 Aligned_cols=106 Identities=8% Similarity=-0.036 Sum_probs=56.7
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc--ccccEEEeCC--CCCCchHHHHHHH-----cC
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVCLDTP--LCNGHTTSMDVLW-----TG 152 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~--~~aDv~l~~~--~~~~g~~~lEAma-----~G 152 (200)
..+++++.+.......+++.+++.|.. |.... +.++....+ ...|+++.-. +...|..+++.+. ..
T Consensus 3 ~~~ilivdd~~~~~~~l~~~L~~~g~~---v~~~~--~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ 77 (127)
T 3i42_A 3 LQQALIVEDYQAAAETFKELLEMLGFQ---ADYVM--SGTDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKT 77 (127)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTTEE---EEEES--SHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSC
T ss_pred cceEEEEcCCHHHHHHHHHHHHHcCCC---EEEEC--CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCC
Confidence 357788875433456778888877653 44333 334444443 3468875332 3334777777665 45
Q ss_pred CCeeecCCCcchhhhHHHHHhhcCCCccee--cCHHHHHHHHHHh
Q psy15362 153 TPVVTLPGETLASRVAASQLATLGCPELIA--RTHKEYQDIAIRL 195 (200)
Q Consensus 153 ~PVV~~~g~~~~~r~~~~~~~~~g~~~~ia--~~~~~yv~~a~~l 195 (200)
+|+|...+..-..... . ...|..+++. -+.+++.+..-..
T Consensus 78 ~~ii~~s~~~~~~~~~-~--~~~g~~~~l~KP~~~~~L~~~i~~~ 119 (127)
T 3i42_A 78 SKFVAVSGFAKNDLGK-E--ACELFDFYLEKPIDIASLEPILQSI 119 (127)
T ss_dssp CEEEEEECC-CTTCCH-H--HHHHCSEEEESSCCHHHHHHHHHHH
T ss_pred CCEEEEECCcchhHHH-H--HHHhhHHheeCCCCHHHHHHHHHHh
Confidence 8888754432211111 1 1224555555 3667776665544
No 309
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=20.70 E-value=2.8e+02 Score=22.54 Aligned_cols=8 Identities=13% Similarity=0.322 Sum_probs=3.9
Q ss_pred HcCCCeee
Q psy15362 150 WTGTPVVT 157 (200)
Q Consensus 150 a~G~PVV~ 157 (200)
-..+|..+
T Consensus 160 f~~LPla~ 167 (315)
T 3h63_A 160 FEWLPLAQ 167 (315)
T ss_dssp HTTSCSEE
T ss_pred HhcCCcEE
Confidence 34456543
No 310
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=20.69 E-value=1.9e+02 Score=18.94 Aligned_cols=64 Identities=13% Similarity=0.136 Sum_probs=43.0
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCC-CCCCchHHHHHHHcCCCeee
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTP-LCNGHTTSMDVLWTGTPVVT 157 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~-~~~~g~~~lEAma~G~PVV~ 157 (200)
.+..+++-|.....+..+++++.++|-. +...++ ..++-+|..- ....+..+..|...|+|||.
T Consensus 17 ~g~~i~isg~~~~~r~~l~~li~~~Gg~-----v~~~~s--------~~~THlI~~~~~~~~~~K~~~A~~~gi~IV~ 81 (107)
T 3l3e_A 17 HKVVVCVSKKLSKKQSELNGIAASLGAD-----YRRSFD--------ETVTHFIYQGRPNDTNREYKSVKERGVHIVS 81 (107)
T ss_dssp TTCEEEECGGGGGGHHHHHHHHHHTTCE-----EESSCC--------TTCCEEECCCCTTCCCHHHHHHHHTTCEEEC
T ss_pred CCeEEEEeCCChHhHHHHHHHHHHcCCE-----Eecccc--------CCceEEEecCCCCCCCHHHHHHHHCCCeEec
Confidence 4678888876434578899999998852 344443 2455555432 11235678889999999998
No 311
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=20.60 E-value=1.8e+02 Score=18.66 Aligned_cols=109 Identities=9% Similarity=0.075 Sum_probs=59.8
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc--cccEEE-eCC-CCCCchHHHHHHH---cCCC
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCL-DTP-LCNGHTTSMDVLW---TGTP 154 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~--~aDv~l-~~~-~~~~g~~~lEAma---~G~P 154 (200)
+.+++++.+.......++....+.|.. +... -+..+....+. ..|+++ +.. +...|..+++.+. ..+|
T Consensus 3 ~~~ilivdd~~~~~~~l~~~l~~~~~~---v~~~--~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ 77 (126)
T 1dbw_A 3 DYTVHIVDDEEPVRKSLAFMLTMNGFA---VKMH--QSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIP 77 (126)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHTTCE---EEEE--SCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCC
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCCcE---EEEe--CCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCC
Confidence 457788875433456677777776653 4432 23345554443 367775 332 3334676777664 4789
Q ss_pred eeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhhc
Q psy15362 155 VVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT 197 (200)
Q Consensus 155 VV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~~ 197 (200)
+|...+..-..... -....|..+++.. +.+++.+...+...
T Consensus 78 ii~~s~~~~~~~~~--~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~ 120 (126)
T 1dbw_A 78 SIVITGHGDVPMAV--EAMKAGAVDFIEKPFEDTVIIEAIERASE 120 (126)
T ss_dssp EEEEECTTCHHHHH--HHHHTTCSEEEESSCCHHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHH--HHHHhCHHHheeCCCCHHHHHHHHHHHHH
Confidence 98754432211111 1124577777663 66777666655443
No 312
>1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30
Probab=20.44 E-value=95 Score=23.51 Aligned_cols=27 Identities=15% Similarity=0.188 Sum_probs=21.3
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEEcCC
Q psy15362 65 IDPSTLQMWVNVLKAVPNSILWLLKFP 91 (200)
Q Consensus 65 ~~~~~l~a~~~i~~~~p~~~l~ivG~~ 91 (200)
+...+.+.+.+..+++|+.++++.|.+
T Consensus 64 G~~~~~~~i~~~~~~CP~tkivl~GYS 90 (207)
T 1qoz_A 64 GTNAAAAAINNFHNSCPDTQLVLVGYS 90 (207)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEEEET
T ss_pred HHHHHHHHHHHHHhhCCCCcEEEEEeC
Confidence 344566777777889999999999974
No 313
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=20.32 E-value=1.4e+02 Score=22.30 Aligned_cols=26 Identities=15% Similarity=0.367 Sum_probs=19.5
Q ss_pred EEEeCCCCC-CchHHHHHHH-cCCCeee
Q psy15362 132 VCLDTPLCN-GHTTSMDVLW-TGTPVVT 157 (200)
Q Consensus 132 v~l~~~~~~-~g~~~lEAma-~G~PVV~ 157 (200)
+.++|--|+ -+..+.+|++ .++|+|=
T Consensus 82 IIINpgAyTHtSvAlrDAl~~v~~P~VE 109 (176)
T 2c4w_A 82 IIINPGAFSHTSIAIADAIMLAGKPVIE 109 (176)
T ss_dssp EEEECGGGGGTCHHHHHHHHTSSSCEEE
T ss_pred EEECcchhccchHHHHHHHHhCCCCEEE
Confidence 456776565 3688999987 7999994
No 314
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=20.30 E-value=2e+02 Score=19.18 Aligned_cols=110 Identities=7% Similarity=-0.009 Sum_probs=56.4
Q ss_pred cEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhc--ccccEEEeCC--CCCCchHHHHHHH---cCCCe
Q psy15362 83 SILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRG--QLADVCLDTP--LCNGHTTSMDVLW---TGTPV 155 (200)
Q Consensus 83 ~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~--~~aDv~l~~~--~~~~g~~~lEAma---~G~PV 155 (200)
.+++++.+.......+++.+++.+-. ..|.... +.++....+ ...|+++.-. +...|..+++.+. ..+||
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~~~-~~v~~~~--~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~i 97 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQPDV-ESVLQAK--NGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKV 97 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTTE-EEEEEES--SHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEE
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEEC--CHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeE
Confidence 56777764322345566666654421 2233222 224444433 2367775433 3334666666654 36888
Q ss_pred eecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhhc
Q psy15362 156 VTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLGT 197 (200)
Q Consensus 156 V~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~~ 197 (200)
|...+..-..... -....|..+++.. +.+++.+...++.+
T Consensus 98 i~ls~~~~~~~~~--~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~ 139 (150)
T 4e7p_A 98 VVVTTFKRAGYFE--RAVKAGVDAYVLKERSIADLMQTLHTVLE 139 (150)
T ss_dssp EEEESCCCHHHHH--HHHHTTCSEEEETTSCHHHHHHHHHHHHT
T ss_pred EEEeCCCCHHHHH--HHHHCCCcEEEecCCCHHHHHHHHHHHHc
Confidence 8754432211111 1224577777763 67777777666654
No 315
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=20.30 E-value=1.3e+02 Score=24.11 Aligned_cols=28 Identities=11% Similarity=-0.001 Sum_probs=19.9
Q ss_pred ccEEEeCCCCCC-chHHHHHHHcCCC-eee
Q psy15362 130 ADVCLDTPLCNG-HTTSMDVLWTGTP-VVT 157 (200)
Q Consensus 130 aDv~l~~~~~~~-g~~~lEAma~G~P-VV~ 157 (200)
+|+.++..|-.. .-.+.|+...|++ +|.
T Consensus 72 ~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi 101 (297)
T 2yv2_A 72 INTSIVFVPAPFAPDAVYEAVDAGIRLVVV 101 (297)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 788876655443 4568888889999 554
No 316
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=20.24 E-value=1.6e+02 Score=23.26 Aligned_cols=56 Identities=13% Similarity=0.089 Sum_probs=31.9
Q ss_pred CCcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCH--HHHHhh---------------cccccEEEeCCCC
Q psy15362 81 PNSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAK--EEHVRR---------------GQLADVCLDTPLC 139 (200)
Q Consensus 81 p~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~--~~~~~~---------------~~~aDv~l~~~~~ 139 (200)
.+.+.+++|.++..+.....+ .+.|. .+|.+..+.+. +++... ...+|+++.+.|.
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L-~~~G~--~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~ 197 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPL-LDQQP--ASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSA 197 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HTTCC--SEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCC
T ss_pred cCCEEEEECchHHHHHHHHHH-HhcCC--CeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcC
Confidence 456888888754444433444 44576 46777776542 222221 1468999877653
No 317
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=20.21 E-value=25 Score=24.55 Aligned_cols=64 Identities=9% Similarity=0.057 Sum_probs=32.6
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcccccEEEeCCCCCCchHHHHHHHcCCCee
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQLADVCLDTPLCNGHTTSMDVLWTGTPVV 156 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~~aDv~l~~~~~~~g~~~lEAma~G~PVV 156 (200)
+.++.+.. ...++.++++++++.. +.. .- ++...+..+|+++.+.+........+.+..|.-++
T Consensus 44 g~~v~v~~---r~~~~~~~~a~~~~~~---~~~--~~---~~~~~~~~~Divi~at~~~~~~~~~~~l~~g~~vi 107 (144)
T 3oj0_A 44 QYKVTVAG---RNIDHVRAFAEKYEYE---YVL--IN---DIDSLIKNNDVIITATSSKTPIVEERSLMPGKLFI 107 (144)
T ss_dssp TCEEEEEE---SCHHHHHHHHHHHTCE---EEE--CS---CHHHHHHTCSEEEECSCCSSCSBCGGGCCTTCEEE
T ss_pred CCEEEEEc---CCHHHHHHHHHHhCCc---eEe--ec---CHHHHhcCCCEEEEeCCCCCcEeeHHHcCCCCEEE
Confidence 45644443 2345667777777642 221 22 22334468999988765443322224444454444
No 318
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=20.19 E-value=2.4e+02 Score=20.02 Aligned_cols=85 Identities=8% Similarity=0.072 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHCCCcEEEEEcCCccc--HHHHHHHHHHcCCCCCcEEEeccCCH--HHHHhhcccccEEEeCCCCCCchH
Q psy15362 69 TLQMWVNVLKAVPNSILWLLKFPAVG--EANIQATAQALGLDQHRILFSNVAAK--EEHVRRGQLADVCLDTPLCNGHTT 144 (200)
Q Consensus 69 ~l~a~~~i~~~~p~~~l~ivG~~~~~--~~~l~~~~~~~gl~~~rv~f~g~~~~--~~~~~~~~~aDv~l~~~~~~~g~~ 144 (200)
-++.+.+.+.+.. +++++|.|... ...+.......|.. +.+...-+. ......+..-|+++.-|..+....
T Consensus 28 ~l~~~~~~i~~a~--~I~i~G~G~S~~~a~~~~~~l~~~g~~---~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~ 102 (187)
T 3sho_A 28 AIEAAVEAICRAD--HVIVVGMGFSAAVAVFLGHGLNSLGIR---TTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRD 102 (187)
T ss_dssp HHHHHHHHHHHCS--EEEEECCGGGHHHHHHHHHHHHHTTCC---EEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHH
T ss_pred HHHHHHHHHHhCC--EEEEEecCchHHHHHHHHHHHHhcCCC---EEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHH
Confidence 3444444444443 78888864321 23445555666664 666652221 223344566788875444332322
Q ss_pred ----HHHHHHcCCCeeec
Q psy15362 145 ----SMDVLWTGTPVVTL 158 (200)
Q Consensus 145 ----~lEAma~G~PVV~~ 158 (200)
+-.|-..|.|+|+.
T Consensus 103 ~~~~~~~ak~~g~~vi~I 120 (187)
T 3sho_A 103 TVAALAGAAERGVPTMAL 120 (187)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCCEEEE
Confidence 33355689999974
No 319
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.16 E-value=1.9e+02 Score=18.91 Aligned_cols=107 Identities=8% Similarity=0.110 Sum_probs=56.8
Q ss_pred CcEEEEEcCCcccHHHHHHHHHHcCCCCCcEEEeccCCHHHHHhhcc--cccEEEeCCCCCC--chHHHHHHH---cCCC
Q psy15362 82 NSILWLLKFPAVGEANIQATAQALGLDQHRILFSNVAAKEEHVRRGQ--LADVCLDTPLCNG--HTTSMDVLW---TGTP 154 (200)
Q Consensus 82 ~~~l~ivG~~~~~~~~l~~~~~~~gl~~~rv~f~g~~~~~~~~~~~~--~aDv~l~~~~~~~--g~~~lEAma---~G~P 154 (200)
..+++++.+.......+++.+++.|.. |.... +..+....+. ..|+++.-. ..+ |..+++.+. ..+|
T Consensus 4 ~~~iLivdd~~~~~~~l~~~L~~~g~~---v~~~~--~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~p 77 (142)
T 2qxy_A 4 TPTVMVVDESRITFLAVKNALEKDGFN---VIWAK--NEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTK 77 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHGGGTCE---EEEES--SHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCE
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCCE---EEEEC--CHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCC
Confidence 356778865433346677777776663 44332 2344444432 367775333 322 555565554 3689
Q ss_pred eeecCCCcchhhhHHHHHhhcCCCcceec--CHHHHHHHHHHhh
Q psy15362 155 VVTLPGETLASRVAASQLATLGCPELIAR--THKEYQDIAIRLG 196 (200)
Q Consensus 155 VV~~~g~~~~~r~~~~~~~~~g~~~~ia~--~~~~yv~~a~~l~ 196 (200)
+|...+..-..... -....|..+++.. +.+++.+...++.
T Consensus 78 ii~ls~~~~~~~~~--~~~~~g~~~~l~kP~~~~~l~~~i~~~~ 119 (142)
T 2qxy_A 78 VAVLSAYVDKDLII--NSVKAGAVDYILKPFRLDYLLERVKKII 119 (142)
T ss_dssp EEEEESCCCHHHHH--HHHHHTCSCEEESSCCHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHH--HHHHCCcceeEeCCCCHHHHHHHHHHHH
Confidence 98764432211111 1224577777663 6677766665554
No 320
>1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A*
Probab=20.07 E-value=96 Score=23.48 Aligned_cols=26 Identities=8% Similarity=0.096 Sum_probs=20.7
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEEcCC
Q psy15362 66 DPSTLQMWVNVLKAVPNSILWLLKFP 91 (200)
Q Consensus 66 ~~~~l~a~~~i~~~~p~~~l~ivG~~ 91 (200)
...+.+.+.+..+++|+.++++.|.+
T Consensus 65 ~~~~~~~i~~~~~~CP~tkivl~GYS 90 (207)
T 1g66_A 65 IAAVASAVNSFNSQCPSTKIVLVGYS 90 (207)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEEEET
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEeeC
Confidence 44566677777889999999999974
Done!