Query psy15368
Match_columns 522
No_of_seqs 272 out of 2713
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 19:05:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15368.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15368hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 6.8E-48 2.3E-52 400.8 18.5 324 50-423 28-491 (510)
2 2ks9_A Substance-P receptor; w 100.0 7.7E-44 2.6E-48 354.7 30.7 295 53-423 31-326 (364)
3 3vw7_A Proteinase-activated re 100.0 2.8E-45 9.7E-50 379.3 17.1 331 50-427 16-473 (484)
4 2rh1_A Beta-2-adrenergic recep 100.0 1.3E-43 4.3E-48 368.1 24.0 321 48-423 34-481 (500)
5 3odu_A C-X-C chemokine recepto 100.0 1.3E-44 4.6E-49 376.0 15.3 325 48-424 42-498 (502)
6 1u19_A Rhodopsin; G protein-co 100.0 1.9E-42 6.6E-47 342.3 25.8 293 50-423 34-328 (349)
7 4dkl_A MU-type opioid receptor 100.0 1.9E-43 6.6E-48 363.4 17.8 322 50-422 13-459 (464)
8 3uon_A Human M2 muscarinic ace 100.0 1E-42 3.5E-47 358.4 22.6 316 50-424 19-463 (467)
9 2lnl_A C-X-C chemokine recepto 100.0 4.8E-42 1.6E-46 331.7 24.3 287 47-420 4-295 (296)
10 4ea3_A Fusion protein of nocic 100.0 3.4E-42 1.2E-46 351.1 24.2 295 50-424 121-415 (434)
11 3eml_A Human adenosine A2A rec 100.0 2.5E-42 8.4E-47 357.5 19.2 323 51-426 18-474 (488)
12 3v2y_A Sphingosine 1-phosphate 100.0 2.4E-42 8.2E-47 360.0 17.9 316 50-425 58-499 (520)
13 3pbl_A D(3) dopamine receptor, 100.0 1.1E-41 3.8E-46 352.1 21.6 311 52-424 36-477 (481)
14 3rze_A Histamine H1 receptor, 100.0 7.6E-42 2.6E-46 350.4 18.8 314 52-424 6-448 (452)
15 4amj_A Beta-1 adrenergic recep 100.0 2E-41 6.9E-46 329.9 16.3 296 52-424 9-306 (315)
16 2z73_A Rhodopsin; visual pigme 100.0 1E-40 3.5E-45 341.7 20.3 297 52-418 32-331 (448)
17 4eiy_A Adenosine receptor A2A/ 100.0 1.4E-41 4.7E-46 347.9 11.0 322 51-425 28-432 (447)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 6.6E-40 2.3E-44 341.4 18.1 317 49-423 177-495 (514)
19 2koe_A Human cannabinoid recep 98.5 1.2E-08 4.1E-13 64.7 -0.0 38 383-420 2-39 (40)
20 1hll_A Alpha-2A adrenergic rec 98.5 5.1E-08 1.7E-12 58.3 2.1 31 187-217 2-32 (32)
21 2ki9_A Cannabinoid receptor 2; 97.8 4.8E-06 1.6E-10 49.8 0.8 29 339-367 1-29 (33)
22 2lot_A Apelin receptor; membra 97.0 9.8E-05 3.4E-09 50.8 -0.1 30 56-85 30-59 (64)
23 2ks9_A Substance-P receptor; w 95.1 2.4 8.3E-05 40.3 21.7 18 117-134 64-81 (364)
24 4ea3_A Fusion protein of nocic 94.8 1.7 5.9E-05 42.8 18.7 21 116-136 156-176 (434)
25 1u19_A Rhodopsin; G protein-co 84.4 26 0.00089 32.5 16.6 58 50-135 31-88 (349)
26 3odu_A C-X-C chemokine recepto 80.0 20 0.00069 35.5 13.2 62 49-138 40-101 (502)
27 4dkl_A MU-type opioid receptor 75.1 34 0.0012 33.3 13.1 58 50-135 10-67 (464)
28 2z73_A Rhodopsin; visual pigme 72.6 5.9 0.0002 38.9 6.7 29 53-81 30-58 (448)
29 2ks1_B Epidermal growth factor 56.3 19 0.00063 22.4 4.1 37 45-84 3-39 (44)
30 3sn6_R Lysozyme, beta-2 adrene 41.5 25 0.00085 35.2 4.9 21 115-135 212-232 (514)
31 3uon_A Human M2 muscarinic ace 33.9 2.3E+02 0.0079 27.1 10.7 58 50-135 16-73 (467)
32 3vw7_A Proteinase-activated re 33.8 3.3E+02 0.011 26.2 14.1 22 116-137 51-72 (484)
33 4grv_A Neurotensin receptor ty 31.1 48 0.0016 33.1 5.0 18 117-134 67-84 (510)
34 3arc_M Photosystem II reaction 30.2 86 0.0029 18.4 3.9 24 267-290 6-29 (36)
35 2l2t_A Receptor tyrosine-prote 29.5 1E+02 0.0035 19.0 5.3 31 51-84 8-38 (44)
36 2ket_A Cathelicidin-6; antimic 28.0 28 0.00094 18.0 1.3 13 407-419 4-16 (27)
37 2rdd_B UPF0092 membrane protei 24.2 31 0.0011 20.4 1.3 15 283-297 13-27 (37)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=6.8e-48 Score=400.77 Aligned_cols=324 Identities=22% Similarity=0.424 Sum_probs=232.1
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccc---cchhhHHHHHhhhhhhhhh-ccchhheehhhccchhhhhh
Q psy15368 50 GPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQ---TVTNMYIVNLAIADECFLI-GIPFLMITIKMQTVTNMYIV 125 (522)
Q Consensus 50 ~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr---~~~~~~l~~LaiaDll~~l-~~p~~~~~~~~~~~~~~~~~ 125 (522)
+....++..+++.+++++|++||+++++++.++|++| +++|+|++|||+||+++++ ++|+.+...
T Consensus 28 ~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~----------- 96 (510)
T 4grv_A 28 DIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNF----------- 96 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 4456778889999999999999999999998877655 6789999999999999754 667665211
Q ss_pred hhhhhhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhh
Q psy15368 126 NLAIADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCH 205 (522)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~ 205 (522)
....+.|.+|+.+|++..++..++..+|++++++||+|||+||++
T Consensus 97 -----------------------------------~~~~~~w~~g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~ 141 (510)
T 4grv_A 97 -----------------------------------IWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICH 141 (510)
T ss_dssp -----------------------------------TTCCSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred -----------------------------------HHhCCCEEhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEec
Confidence 112467999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccchhhhhHHHHHHHHHHHHHHhhheeEEccCC------ccccccccCCCcccCccchhhhHHHHHHHHHH
Q psy15368 206 PITAPNLRTPFISKVVSFIAWTASAIFMIPVIMYASIIDSEN------TKSCNIMWPETENLNGQSAFILYTFILGFAIP 279 (522)
Q Consensus 206 P~~~~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~~~~~------~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp 279 (522)
|++|+..++++++.++++++|++++++++|.++......... ...|...+... ....|..+..++.+++|
T Consensus 142 P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~c~~~~~~~----~~~~~~~~~~~~~f~iP 217 (510)
T 4grv_A 142 PFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGLVCTPIVDTA----TVKVVIQVNTFMSFLFP 217 (510)
T ss_dssp CCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGGGEEEEECSCHH----HHHHHHHHHHHHHTHHH
T ss_pred cccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCCCccccccccccc----hhhhhhhhhhhHHHhhh
Confidence 999999999999999999999999999999888776543322 13355444322 24467777788889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhhhccccccc-----e-eeeE--------------------EeE-----------
Q psy15368 280 LVLIFVFYYLVIRKLRTVGPKNKPKEKKKSHRKVT-----K-LVLT--------------------VIT----------- 322 (522)
Q Consensus 280 ~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~-----~-~~~~--------------------~~~----------- 322 (522)
+++|+++|.+|++.++++.+.....+.....+... . .... ...
T Consensus 218 ~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (510)
T 4grv_A 218 MLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDE 297 (510)
T ss_dssp HHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCEEEETTEECCCSSSHHHHHHSCCC---CCCTTBCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccccccccccCCCCCCCccccccCcCCCCCCCCcccCCc
Confidence 99999999999999987654322111100000000 0 0000 000
Q ss_pred --------------------------------------------------------------------------------
Q psy15368 323 -------------------------------------------------------------------------------- 322 (522)
Q Consensus 323 -------------------------------------------------------------------------------- 322 (522)
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (510)
T 4grv_A 298 AEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLNNKRWDEAAVNLAKSRWYNQT 377 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCHHHHHHHHHSSCSCCSS
T ss_pred cccccCCCCcccccccccCCCCCCCcCccccccccccCCccccCCCCCCCCCCccccccccCCCcccccccccccccccC
Confidence
Q ss_pred ----------eeecCCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCC---chhHHHHHHHHH
Q psy15368 323 ----------LRTVGPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIFTPPRQCQS---SITVIVFLIAGA 389 (522)
Q Consensus 323 ----------~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~~~~~~~~~---~~~~~~~~~~~~ 389 (522)
.+........++..++|+|++||+++++++|++||+||++..++..+.++..... ....++..++.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (510)
T 4grv_A 378 PNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNA 457 (510)
T ss_dssp HHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred CccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHH
Confidence 0000000111233467889999999999999999999999999988876533222 233456778899
Q ss_pred HHhhccchhHHHHHHcChHHHHHHHHHccccCCC
Q psy15368 390 LSYSNSAMNPILYAFLSDNFKKSFLKACTCAAGK 423 (522)
Q Consensus 390 l~~~ns~~NPiIY~~~~~~fR~~l~~~~~c~~~~ 423 (522)
|+++||++||+||+++|++||++++++++|++.+
T Consensus 458 L~Y~NS~iNPiIY~~~n~~FR~aFk~iL~C~C~~ 491 (510)
T 4grv_A 458 LAYASSAINPILYNLVSANFRQVFLSTLACLCPG 491 (510)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCCC-----------
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999877643
No 2
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=7.7e-44 Score=354.68 Aligned_cols=295 Identities=25% Similarity=0.457 Sum_probs=240.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhh-ccchhheehhhccchhhhhhhhhhhh
Q psy15368 53 LFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLI-GIPFLMITIKMQTVTNMYIVNLAIAD 131 (522)
Q Consensus 53 ~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l-~~p~~~~~~~~~~~~~~~~~~~~~~~ 131 (522)
...+..+++.+++++|++||+++++++.+++++|++.+++++|||++|+++++ .+|+.+.
T Consensus 31 ~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~------------------- 91 (364)
T 2ks9_A 31 QIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFT------------------- 91 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHH-------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 34455888999999999999999999999999999999999999999998754 4555441
Q ss_pred hhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q psy15368 132 ECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPITAPN 211 (522)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~ 211 (522)
....+.|.+++..|++..++..++..+|++++++||+|||++|++|++|+
T Consensus 92 -----------------------------~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~- 141 (364)
T 2ks9_A 92 -----------------------------YAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR- 141 (364)
T ss_dssp -----------------------------HHHHTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS-
T ss_pred -----------------------------HHHcCCccchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-
Confidence 11236799999999999999999999999999999999999999999986
Q ss_pred CCCccchhhhhHHHHHHHHHHHHHHhhheeEEccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy15368 212 LRTPFISKVVSFIAWTASAIFMIPVIMYASIIDSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVFYYLVI 291 (522)
Q Consensus 212 ~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~I~ 291 (522)
.+++++..+++++|++++++++|.+++......+....|..+++..........|.....++.+++|+++++++|.+|+
T Consensus 142 -~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~ 220 (364)
T 2ks9_A 142 -LSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVG 220 (364)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTCSSBCCCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred -cccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCCCEEeecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5888899999999999999999988777666666667798887665333334567777888889999999999999999
Q ss_pred HHHHhcCCCCCchhhhccccccceeeeEEeEeeecCCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHhcC
Q psy15368 292 RKLRTVGPKNKPKEKKKSHRKVTKLVLTVITLRTVGPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIFTP 371 (522)
Q Consensus 292 ~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~~~ 371 (522)
+.++++....+... ..+++.++++|++|++++++++|++||+|+.+..++..+.+
T Consensus 221 ~~l~~~~~~~~~~~-------------------------~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~ 275 (364)
T 2ks9_A 221 ITLWASEIPGDSSD-------------------------RYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINP 275 (364)
T ss_dssp HSSCSCCCSSSSSS-------------------------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHhcCCCCCcch-------------------------hhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 98876543322111 11234567889999999999999999999999998887765
Q ss_pred CCCCCCchhHHHHHHHHHHHhhccchhHHHHHHcChHHHHHHHHHccccCCC
Q psy15368 372 PRQCQSSITVIVFLIAGALSYSNSAMNPILYAFLSDNFKKSFLKACTCAAGK 423 (522)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~l~~~~~c~~~~ 423 (522)
... .......+..+..++.++|+++||+||++++++||++++++++|++++
T Consensus 276 ~~~-~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~~ 326 (364)
T 2ks9_A 276 DLY-LKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFI 326 (364)
T ss_dssp TSC-SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSSCCC
T ss_pred ccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCCC
Confidence 422 122334466778889999999999999999999999999999876644
No 3
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.8e-45 Score=379.32 Aligned_cols=331 Identities=19% Similarity=0.285 Sum_probs=236.3
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhhccchhheehhhccchhhhhhhhhh
Q psy15368 50 GPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLIGIPFLMITIKMQTVTNMYIVNLAI 129 (522)
Q Consensus 50 ~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l~~p~~~~~~~~~~~~~~~~~~~~~ 129 (522)
.+....+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++++|+.++.
T Consensus 16 ~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~---------------- 79 (484)
T 3vw7_A 16 SSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISY---------------- 79 (484)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHH----------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 4567788999999999999999999999999999999999999999999999988777766621
Q ss_pred hhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q psy15368 130 ADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPITA 209 (522)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~ 209 (522)
....+.|.++...|++..++..++..+|++++++||+|||++|++|++|
T Consensus 80 -------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~ 128 (484)
T 3vw7_A 80 -------------------------------YFSGSDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQS 128 (484)
T ss_dssp -------------------------------HHTTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred -------------------------------HHhcCCcccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEccccc
Confidence 1123589999999999999999999999999999999999999999999
Q ss_pred CCCCCccchhhhhHHHHHHHHHHHHHHhhheeEEcc--CCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHHH
Q psy15368 210 PNLRTPFISKVVSFIAWTASAIFMIPVIMYASIIDS--ENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVFY 287 (522)
Q Consensus 210 ~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~~~--~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y 287 (522)
+..++++++..+++++|++++++++|.++....... .....|...+...........|.....++.+++|+++++++|
T Consensus 129 ~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y 208 (484)
T 3vw7_A 129 LSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCY 208 (484)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceeeccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 999999999999999999999999998876655432 233678877765533223334667777889999999999999
Q ss_pred HHHHHHHHhcCCCCCchhhhccccccce----eeeEE--eEeeecC----------------------------------
Q psy15368 288 YLVIRKLRTVGPKNKPKEKKKSHRKVTK----LVLTV--ITLRTVG---------------------------------- 327 (522)
Q Consensus 288 ~~I~~~lr~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~---------------------------------- 327 (522)
.+|++.++++.++.+............. ...+. .......
T Consensus 209 ~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (484)
T 3vw7_A 209 VSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQD 288 (484)
T ss_dssp HHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSCHHHHHHHHHHHHTSCCSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHhHhhHHHHhhhhccchhhhhccccccceeeeccccccCCcchhcccccccccccccCCCCCCccccccccccc
Confidence 9999999987753322111100000000 00000 0000000
Q ss_pred --------------------------------------------------------------------------------
Q psy15368 328 -------------------------------------------------------------------------------- 327 (522)
Q Consensus 328 -------------------------------------------------------------------------------- 327 (522)
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 368 (484)
T 3vw7_A 289 VDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVI 368 (484)
T ss_dssp HHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHH
T ss_pred ccccccccccccccCcccccccccccchhhccccccCccccccchhhhhhhhccchhhhhhhhhhhhhhccCcccccCcc
Confidence
Q ss_pred -----CCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHhhccchhHHHH
Q psy15368 328 -----PKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIFTPPRQCQSSITVIVFLIAGALSYSNSAMNPILY 402 (522)
Q Consensus 328 -----~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY 402 (522)
.+.+...+.++++|++|++++++++|++||+|+.++.++..+.............+..++.+|.++|+++||+||
T Consensus 369 ~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY 448 (484)
T 3vw7_A 369 TTFRTGTWDAYANRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIY 448 (484)
T ss_dssp HHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred ceeecchhccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHH
Confidence 000001245667899999999999999999999999999876655444445556778899999999999999999
Q ss_pred HHcChHHHHHHHHHccccCCCCccc
Q psy15368 403 AFLSDNFKKSFLKACTCAAGKDVNA 427 (522)
Q Consensus 403 ~~~~~~fR~~l~~~~~c~~~~~~~~ 427 (522)
+++|++||++++++++|++.++.+.
T Consensus 449 ~~~~~~fR~~~~~ll~~~~~~~~~~ 473 (484)
T 3vw7_A 449 YYASSECQRYVYSILCCKESSDPSC 473 (484)
T ss_dssp HHTSSCC------------------
T ss_pred HHhhHHHHHHHHHHHhhccCCCccc
Confidence 9999999999999999887665433
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=1.3e-43 Score=368.11 Aligned_cols=321 Identities=22% Similarity=0.378 Sum_probs=235.8
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhh-ccchhheehhhccchhhhhhh
Q psy15368 48 STGPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLI-GIPFLMITIKMQTVTNMYIVN 126 (522)
Q Consensus 48 ~~~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l-~~p~~~~~~~~~~~~~~~~~~ 126 (522)
...+...++..+++.+++++|++||+++++++.+++++|++.++|++|||++|+++++ .+|+.+.
T Consensus 34 ~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~-------------- 99 (500)
T 2rh1_A 34 QRDEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAA-------------- 99 (500)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHH--------------
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 3345667788899999999999999999999999999999999999999999999865 5666551
Q ss_pred hhhhhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhc
Q psy15368 127 LAIADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHP 206 (522)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P 206 (522)
....+.|.+|...|++..++..++..+|++++++||+|||++|++|
T Consensus 100 ----------------------------------~~~~~~w~~~~~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~P 145 (500)
T 2rh1_A 100 ----------------------------------HILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSP 145 (500)
T ss_dssp ----------------------------------HHHHTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred ----------------------------------HHHhCCCcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeecc
Confidence 1123679999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccchhhhhHHHHHHHHHHHH-HHhhheeEEccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHH
Q psy15368 207 ITAPNLRTPFISKVVSFIAWTASAIFMI-PVIMYASIIDSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFV 285 (522)
Q Consensus 207 ~~~~~~~t~~~~~~~i~~~Wi~s~~~~~-p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~ 285 (522)
++|+++++++++..+++++|++++++++ |.++.+..........|...+...+ ......|.++..++.+++|++++++
T Consensus 146 l~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~-~~~~~~y~~~~~~~~~~iPl~ii~~ 224 (500)
T 2rh1_A 146 FKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCD-FFTNQAYAIASSIVSFYVPLVIMVF 224 (500)
T ss_dssp STTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCC-CCCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCcceecccccccc-cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999974 6544322222222234654432211 1234567778888889999999999
Q ss_pred HHHHHHHHHHhcCCCCCchhhhcc------c---ccc---ceeeeEE---------------------------------
Q psy15368 286 FYYLVIRKLRTVGPKNKPKEKKKS------H---RKV---TKLVLTV--------------------------------- 320 (522)
Q Consensus 286 ~y~~I~~~lr~~~~~~~~~~~~~~------~---~~~---~~~~~~~--------------------------------- 320 (522)
+|.+|++.+|++.++.+....... . ... .......
T Consensus 225 ~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (500)
T 2rh1_A 225 VYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFN 304 (500)
T ss_dssp HHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESCSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCCcccccccccccccccCCCCCCccchhhhhhccc
Confidence 999999999987665110000000 0 000 0000000
Q ss_pred e-----------------------------------------------Eeee-c--------------------------
Q psy15368 321 I-----------------------------------------------TLRT-V-------------------------- 326 (522)
Q Consensus 321 ~-----------------------------------------------~~~~-~-------------------------- 326 (522)
. ..+. .
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (500)
T 2rh1_A 305 QDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKR 384 (500)
T ss_dssp HHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHH
T ss_pred CCccccccccccCCCCCCCCCcccccccchhhcccCCCCccccccccCchhhhhcccccccccccccccccCCCCccccc
Confidence 0 0000 0
Q ss_pred ------CCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHhhccchhHH
Q psy15368 327 ------GPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIFTPPRQCQSSITVIVFLIAGALSYSNSAMNPI 400 (522)
Q Consensus 327 ------~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPi 400 (522)
.....+++..++|+|++|++++++++|++||+|+++..++..+... ..+..++.+..+|.++||++||+
T Consensus 385 ~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~-----~~~~~~~~~~~~L~y~NS~iNPi 459 (500)
T 2rh1_A 385 VITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN-----LIRKEVYILLNWIGYVNSGFNPL 459 (500)
T ss_dssp HHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT-----SSCHHHHHHHHHHHHHGGGTHHH
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----cccHHHHHHHHHHHHHHHhhcch
Confidence 0000111123478999999999999999999999999999888632 23455788889999999999999
Q ss_pred HHHHcChHHHHHHHHHccccCCC
Q psy15368 401 LYAFLSDNFKKSFLKACTCAAGK 423 (522)
Q Consensus 401 IY~~~~~~fR~~l~~~~~c~~~~ 423 (522)
||++ |++||++++++++|++.+
T Consensus 460 IY~~-n~~FR~af~~il~~~~~~ 481 (500)
T 2rh1_A 460 IYCR-SPDFRIAFQELLCLRRSS 481 (500)
T ss_dssp HGGG-SHHHHHHHHHHTTC----
T ss_pred hhhc-cHHHHHHHHHHHhhhccC
Confidence 9985 999999999999876654
No 5
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=1.3e-44 Score=376.02 Aligned_cols=325 Identities=27% Similarity=0.450 Sum_probs=254.9
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhhccchhheehhhccchhhhhhhh
Q psy15368 48 STGPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLIGIPFLMITIKMQTVTNMYIVNL 127 (522)
Q Consensus 48 ~~~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l~~p~~~~~~~~~~~~~~~~~~~ 127 (522)
.......++..+++.+++++|++||+++++++.+++++|++.++|++|||++|+++++.+|+.+..
T Consensus 42 ~~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~p~~~~~-------------- 107 (502)
T 3odu_A 42 ENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVD-------------- 107 (502)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHHTTHHHHHHH--------------
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 344567788999999999999999999999999999999999999999999999987777776611
Q ss_pred hhhhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy15368 128 AIADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPI 207 (522)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~ 207 (522)
....|.++...|++..++..++..+|++++++||+|||++|++|+
T Consensus 108 -----------------------------------~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~ 152 (502)
T 3odu_A 108 -----------------------------------AVANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHAT 152 (502)
T ss_dssp -----------------------------------HHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred -----------------------------------HhcCCcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheeccc
Confidence 114699999999999999999999999999999999999999999
Q ss_pred CCCCCCCccchhhhhHHHHHHHHHHHHHHhhheeEEccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHHH
Q psy15368 208 TAPNLRTPFISKVVSFIAWTASAIFMIPVIMYASIIDSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVFY 287 (522)
Q Consensus 208 ~~~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y 287 (522)
+|+..++++++.++++++|++++++++|.+++...........|...+... .....|.+...++.+++|+++++++|
T Consensus 153 ~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~---~~~~~~~~~~~~~~~~~p~~ii~~~y 229 (502)
T 3odu_A 153 NSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPND---LWVVVFQFQHIMVGLILPGIVILSCY 229 (502)
T ss_dssp SCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECSSSEEEEECCSSH---HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccCCceEEeecCCch---hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999888887777777898776554 33456777778888999999999999
Q ss_pred HHHHHHHHhcCCCCCchhhhccccccceeee-------EEeEeeec----------------------------------
Q psy15368 288 YLVIRKLRTVGPKNKPKEKKKSHRKVTKLVL-------TVITLRTV---------------------------------- 326 (522)
Q Consensus 288 ~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~---------------------------------- 326 (522)
.+|++.++++.++.+.........+...... ........
T Consensus 230 ~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (502)
T 3odu_A 230 CIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQ 309 (502)
T ss_dssp HHHHHHGGGCSCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEECSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHH
T ss_pred HHHHHHHhhcccchhhhhhhhccccccccCCCccccccccccccCcCccccccchhhhcccCcchhhhhhccccccchhh
Confidence 9999999998776544332221111000000 00000000
Q ss_pred --------------------------------------------------------------------------------
Q psy15368 327 -------------------------------------------------------------------------------- 326 (522)
Q Consensus 327 -------------------------------------------------------------------------------- 326 (522)
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (502)
T 3odu_A 310 DVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRV 389 (502)
T ss_dssp HHHHHHHHHTTCTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHHHHHTTSHHHHHSHHHHHHH
T ss_pred cccccccccccCccccccccCCCCCCcchhhhhhhhhchhhcccCccccchhhhchhhhhccccccccccccCcchhhhc
Confidence
Q ss_pred ------CCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHhcCCCCC-----CCchhHHHHHHHHHHHhhcc
Q psy15368 327 ------GPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIFTPPRQC-----QSSITVIVFLIAGALSYSNS 395 (522)
Q Consensus 327 ------~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~ns 395 (522)
......+.+.++++|+++++++++++|++||+|+.++.++..+...... ......++..++.+|.++|+
T Consensus 390 ~~~~r~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns 469 (502)
T 3odu_A 390 ITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHC 469 (502)
T ss_dssp HHHHHHCSSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHH
T ss_pred cccccccccchhhhhhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhc
Confidence 0000011334568999999999999999999999999888775422111 12234456678899999999
Q ss_pred chhHHHHHHcChHHHHHHHHHccccCCCC
Q psy15368 396 AMNPILYAFLSDNFKKSFLKACTCAAGKD 424 (522)
Q Consensus 396 ~~NPiIY~~~~~~fR~~l~~~~~c~~~~~ 424 (522)
++||+||++++++||++++++++|++.+.
T Consensus 470 ~~NPiIY~~~~~~fR~~~~~ll~~~~~~~ 498 (502)
T 3odu_A 470 CLNPILYAFLGAKFKTSAQHALTSGRPLE 498 (502)
T ss_dssp HHHHHHTTTTTCCCCCCHHHHHSSCSSCG
T ss_pred ccchhhhhhcCHHHHHHHHHHhccCCchh
Confidence 99999999999999999999998877544
No 6
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=1.9e-42 Score=342.31 Aligned_cols=293 Identities=21% Similarity=0.441 Sum_probs=238.2
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhhc-cchhheehhhccchhhhhhhhh
Q psy15368 50 GPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLIG-IPFLMITIKMQTVTNMYIVNLA 128 (522)
Q Consensus 50 ~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l~-~p~~~~~~~~~~~~~~~~~~~~ 128 (522)
++....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++. +|..+.
T Consensus 34 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~---------------- 97 (349)
T 1u19_A 34 EPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLY---------------- 97 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHH----------------
T ss_pred chHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHH----------------
Confidence 345567888899999999999999999999999999999999999999999998664 444331
Q ss_pred hhhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCC
Q psy15368 129 IADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPIT 208 (522)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~ 208 (522)
....+.|..++..|++..++..++..+|++++++||+|||++|++|++
T Consensus 98 --------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~ 145 (349)
T 1u19_A 98 --------------------------------TSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS 145 (349)
T ss_dssp --------------------------------HHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSS
T ss_pred --------------------------------HHhcCeeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcc
Confidence 112366889999999999999999999999999999999999999999
Q ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHHhhhe-eEEccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHHH
Q psy15368 209 APNLRTPFISKVVSFIAWTASAIFMIPVIMYA-SIIDSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVFY 287 (522)
Q Consensus 209 ~~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~-~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y 287 (522)
|++ .+++++...++++|+++++.++|.+... ..........|..++...........|.....++.+++|+++++++|
T Consensus 146 ~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y 224 (349)
T 1u19_A 146 NFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCY 224 (349)
T ss_dssp SCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTTTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred cee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCCceeecccccCccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 977 6889999999999999999999876643 33333445668777655432233456777778888999999999999
Q ss_pred HHHHHHHHhcCCCCCchhhhccccccceeeeEEeEeeecCCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHH
Q psy15368 288 YLVIRKLRTVGPKNKPKEKKKSHRKVTKLVLTVITLRTVGPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIAL 367 (522)
Q Consensus 288 ~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~ 367 (522)
.+|++.+|++.++.+.. +++.++++|.++++++++++|++||+|+.+..++.
T Consensus 225 ~~i~~~l~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~ 276 (349)
T 1u19_A 225 GQLVFTVKEAAAQQQES----------------------------ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYI 276 (349)
T ss_dssp TTTTTSSCSCCCSSCSS----------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhccc----------------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 99999988765433211 23346778999999999999999999999998887
Q ss_pred HhcCCCCCCCchhHHHHHHHHHHHhhccchhHHHHHHcChHHHHHHHHHccccCCC
Q psy15368 368 IFTPPRQCQSSITVIVFLIAGALSYSNSAMNPILYAFLSDNFKKSFLKACTCAAGK 423 (522)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~l~~~~~c~~~~ 423 (522)
....... ....+..+..++.++|+++||+||++++++||++++++++|++++
T Consensus 277 ~~~~~~~----~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c~~~~ 328 (349)
T 1u19_A 277 FTHQGSD----FGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP 328 (349)
T ss_dssp HHTTTSC----CCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTSSCCC
T ss_pred eecCCcc----cchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcccCCC
Confidence 7654321 233466788899999999999999999999999999999876543
No 7
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=1.9e-43 Score=363.41 Aligned_cols=322 Identities=32% Similarity=0.602 Sum_probs=248.9
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhhccchhheehhhccchhhhhhhhhh
Q psy15368 50 GPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLIGIPFLMITIKMQTVTNMYIVNLAI 129 (522)
Q Consensus 50 ~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l~~p~~~~~~~~~~~~~~~~~~~~~ 129 (522)
+....++..+++.+++++|++||+++++++.+++++|++.++|++|||++|+++++.+|+.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~p~~~~----------------- 75 (464)
T 4dkl_A 13 SMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSV----------------- 75 (464)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 455678899999999999999999999999999999999999999999999998777776661
Q ss_pred hhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q psy15368 130 ADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPITA 209 (522)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~ 209 (522)
....+.|.++...|++..++..++..+|++++++||+|||++|++|++|
T Consensus 76 -------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~ 124 (464)
T 4dkl_A 76 -------------------------------NYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKA 124 (464)
T ss_dssp -------------------------------HHHHSSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred -------------------------------HHHhCCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 1123679999999999999999999999999999999999999999999
Q ss_pred CCCCCccchhhhhHHHHHHHHHHHHHHhhheeEEccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy15368 210 PNLRTPFISKVVSFIAWTASAIFMIPVIMYASIIDSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVFYYL 289 (522)
Q Consensus 210 ~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~ 289 (522)
+++++++++..+++++|++++++++|.+++....+......|...+...+. .....|.+...++.+++|+++++++|.+
T Consensus 125 ~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~ii~~~y~~ 203 (464)
T 4dkl_A 125 LDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTW-YWENLLKICVFIFAFIMPVLIITVCYGL 203 (464)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECCBCCSSSHH-HHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred cccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCceEEeecCCcch-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999887776666666778877765421 1234567777888899999999999999
Q ss_pred HHHHHHhcCCCCCchhhhccccccce--------eeeEEeEee-------------------------------------
Q psy15368 290 VIRKLRTVGPKNKPKEKKKSHRKVTK--------LVLTVITLR------------------------------------- 324 (522)
Q Consensus 290 I~~~lr~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~------------------------------------- 324 (522)
|++.++++.++.+........+.... .........
T Consensus 204 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (464)
T 4dkl_A 204 MILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVD 283 (464)
T ss_dssp HHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSCSHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcchhhhhccccccccccccCCCCCccccccccccCCCccccccccccccccccccceecCCccccccccCCc
Confidence 99999876653332221110000000 000000000
Q ss_pred --------------------------------------------------------------------------------
Q psy15368 325 -------------------------------------------------------------------------------- 324 (522)
Q Consensus 325 -------------------------------------------------------------------------------- 324 (522)
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (464)
T 4dkl_A 284 AAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITT 363 (464)
T ss_dssp HHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHH
T ss_pred ccccccccCCCCCccccCcccccchhhhhccccCCCCCcccccccccchhhcccchhhcccccccccccCccccceeeec
Confidence
Q ss_pred ecCCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHhhccchhHHHHHH
Q psy15368 325 TVGPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIFTPPRQCQSSITVIVFLIAGALSYSNSAMNPILYAF 404 (522)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~ 404 (522)
.........++.++|+|++|++++++++|++||+|+.++.++..+.... ..........+..+|.++|+++||+||++
T Consensus 364 ~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~ns~~NPiIY~~ 441 (464)
T 4dkl_A 364 FRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIP--ETTFQTVSWHFCIALGYTNSCLNPVLYAF 441 (464)
T ss_dssp HHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCC--ccccchhHHHHHHHHHHhhhchhHHHHHH
Confidence 0000111223456778999999999999999999999999998876432 23445566778889999999999999999
Q ss_pred cChHHHHHHHHHccccCC
Q psy15368 405 LSDNFKKSFLKACTCAAG 422 (522)
Q Consensus 405 ~~~~fR~~l~~~~~c~~~ 422 (522)
++++||++++++|+|+..
T Consensus 442 ~~~~fR~~~~~lc~~~~~ 459 (464)
T 4dkl_A 442 LDENFKRCFREFCIPTSS 459 (464)
T ss_dssp HCHHHHHHHHHHHC----
T ss_pred hhHHHHHHHHHHhccccc
Confidence 999999999998665443
No 8
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=1e-42 Score=358.41 Aligned_cols=316 Identities=24% Similarity=0.391 Sum_probs=240.4
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhh-ccchhheehhhccchhhhhhhhh
Q psy15368 50 GPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLI-GIPFLMITIKMQTVTNMYIVNLA 128 (522)
Q Consensus 50 ~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l-~~p~~~~~~~~~~~~~~~~~~~~ 128 (522)
.....++..+++.+++++|++||+++++++.+++++|++.++|++|||++|+++++ .+|+.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~----------------- 81 (467)
T 3uon_A 19 KTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYT----------------- 81 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHH-----------------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 44557788899999999999999999999999999999999999999999999854 555555
Q ss_pred hhhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCC
Q psy15368 129 IADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPIT 208 (522)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~ 208 (522)
.....+.|.++...|++..++..++..+|++++++||+|||++|++|++
T Consensus 82 -------------------------------~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~ 130 (467)
T 3uon_A 82 -------------------------------LYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLT 130 (467)
T ss_dssp -------------------------------HHHHSSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTT
T ss_pred -------------------------------HHHhcCCccCCcchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 1123468999999999999999999999999999999999999999999
Q ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHHhhheeEE---ccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHH
Q psy15368 209 APNLRTPFISKVVSFIAWTASAIFMIPVIMYASII---DSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFV 285 (522)
Q Consensus 209 ~~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~---~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~ 285 (522)
|+..++++++..+++++|++++++++|.++.+... .......|..++.. ...|.++..++.+++|++++++
T Consensus 131 ~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~------~~~~~~~~~~~~~~~p~~ii~~ 204 (467)
T 3uon_A 131 YPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFS------NAAVTFGTAIAAFYLPVIIMTV 204 (467)
T ss_dssp SGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCCGGGG------SHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcceeecCc------chHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999877654322 12233567666542 3367788888899999999999
Q ss_pred HHHHHHHHHHhcCCCCCchhhhccccccc------eeeeEEeEeee----------------------------------
Q psy15368 286 FYYLVIRKLRTVGPKNKPKEKKKSHRKVT------KLVLTVITLRT---------------------------------- 325 (522)
Q Consensus 286 ~y~~I~~~lr~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~---------------------------------- 325 (522)
+|++|++.+|++.++.+........+... ...........
T Consensus 205 ~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (467)
T 3uon_A 205 LYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFN 284 (467)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECCCCSSHHHHHHHHHHHHSSCCTTBCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccccCCcccccccccccccccCCCCcccccccccccc
Confidence 99999999998766433222111100000 00000000000
Q ss_pred --------------------------------------------------------------------------------
Q psy15368 326 -------------------------------------------------------------------------------- 325 (522)
Q Consensus 326 -------------------------------------------------------------------------------- 325 (522)
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (467)
T 3uon_A 285 QDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKR 364 (467)
T ss_dssp HHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHH
T ss_pred cccchhhcccccCCCCCccccccccccccccccceeeccccCCCccccccchhhhcCccccccccccccccCCCCccccc
Confidence
Q ss_pred -----cCCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHhhccchhHH
Q psy15368 326 -----VGPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIFTPPRQCQSSITVIVFLIAGALSYSNSAMNPI 400 (522)
Q Consensus 326 -----~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPi 400 (522)
........+..++|+|+++++++++++|++||+|+.+..++..+.... ....+..+..++.++|+++||+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~-----~~~~~~~i~~~L~~~ns~~NPi 439 (467)
T 3uon_A 365 VITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPC-----IPNTVWTIGYWLCYINSTINPA 439 (467)
T ss_dssp HHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTT-----SCHHHHHHHHHHHHHTTTHHHH
T ss_pred ccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcc-----cchHHHHHHHHHHHHhhhhhhH
Confidence 000001111235789999999999999999999999999998886532 2356788899999999999999
Q ss_pred HHHHcChHHHHHHHHHccccCCCC
Q psy15368 401 LYAFLSDNFKKSFLKACTCAAGKD 424 (522)
Q Consensus 401 IY~~~~~~fR~~l~~~~~c~~~~~ 424 (522)
||++++++||++++++++|++++.
T Consensus 440 IY~~~~~~fR~~~~~ll~c~~~~~ 463 (467)
T 3uon_A 440 CYALCNATFKKTFKHLLMCHYKNI 463 (467)
T ss_dssp HHHHHCHHHHHHHHHHCC------
T ss_pred HHHHcCHHHHHHHHHHHhhhccCC
Confidence 999999999999999998877654
No 9
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=4.8e-42 Score=331.66 Aligned_cols=287 Identities=24% Similarity=0.483 Sum_probs=229.5
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhhccchhheehhhccchhhhhhh
Q psy15368 47 HSTGPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLIGIPFLMITIKMQTVTNMYIVN 126 (522)
Q Consensus 47 ~~~~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l~~p~~~~~~~~~~~~~~~~~~ 126 (522)
.++......+..+++.+++++|++||+++++++.++|++|+++|++++|||++|+++++.+|+.+..
T Consensus 4 ~e~~~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~~p~~~~~------------- 70 (296)
T 2lnl_A 4 LETETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAAS------------- 70 (296)
T ss_dssp TSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHHHHHHHHH-------------
T ss_pred CcccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHhhhHHHhh-------------
Confidence 3334445677888999999999999999999999999999999999999999999988877776511
Q ss_pred hhhhhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhc
Q psy15368 127 LAIADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHP 206 (522)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P 206 (522)
....|..|+..|++..++...+..+|++++++||+|||++|++|
T Consensus 71 ------------------------------------~~~~~~~~~~~c~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P 114 (296)
T 2lnl_A 71 ------------------------------------KVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHA 114 (296)
T ss_dssp ------------------------------------HHSSSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSC
T ss_pred ------------------------------------ccCCCccchhHHHHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhc
Confidence 11569999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccchhhhhHHHHHHHHHHHHHHhhheeEEccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHH
Q psy15368 207 ITAPNLRTPFISKVVSFIAWTASAIFMIPVIMYASIIDSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVF 286 (522)
Q Consensus 207 ~~~~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~ 286 (522)
++|+...+ ++...+++++|+++++.++|..........+....|...............|......+.+++|+.++.++
T Consensus 115 ~~~~~~~~-~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~ 193 (296)
T 2lnl_A 115 TRTLTQKR-HLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFC 193 (296)
T ss_dssp SSSSCCHH-HHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCSCCTTTTTTHHHHTTTHHHHHHHHHHHHHH
T ss_pred cccchhhh-hhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeeccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987654 56677788899999999999877665544433322222222222223455677777788899999999999
Q ss_pred HHHHHHHHHhcCCCCCchhhhccccccceeeeEEeEeeecCCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHH
Q psy15368 287 YYLVIRKLRTVGPKNKPKEKKKSHRKVTKLVLTVITLRTVGPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIA 366 (522)
Q Consensus 287 y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~ 366 (522)
|.++.+.++++ ..++++|.+|++.+++++|++||+|+.+..++
T Consensus 194 y~~i~~~~~~~-------------------------------------~~~~~~k~~~~~~~v~~~f~icw~P~~i~~~~ 236 (296)
T 2lnl_A 194 YGFTLRTLFKA-------------------------------------HMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLA 236 (296)
T ss_dssp HHHHTTTSSSC-------------------------------------CCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------------------------------------hhhhhhhHHHHHHHhhhheeeeehHHHHHHHH
Confidence 99887655431 12456789999999999999999999999999
Q ss_pred HHhcCCCCCCCc-----hhHHHHHHHHHHHhhccchhHHHHHHcChHHHHHHHHHcccc
Q psy15368 367 LIFTPPRQCQSS-----ITVIVFLIAGALSYSNSAMNPILYAFLSDNFKKSFLKACTCA 420 (522)
Q Consensus 367 ~~~~~~~~~~~~-----~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~l~~~~~c~ 420 (522)
..+......... .......+..++.++||++||+||+++|++||++++|+++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll~cr 295 (296)
T 2lnl_A 237 DTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMH 295 (296)
T ss_dssp HHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHHHHC
T ss_pred HHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCC
Confidence 887655332221 122456778899999999999999999999999999999885
No 10
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=3.4e-42 Score=351.06 Aligned_cols=295 Identities=38% Similarity=0.681 Sum_probs=233.9
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhhccchhheehhhccchhhhhhhhhh
Q psy15368 50 GPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLIGIPFLMITIKMQTVTNMYIVNLAI 129 (522)
Q Consensus 50 ~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l~~p~~~~~~~~~~~~~~~~~~~~~ 129 (522)
++....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|+++++.+|+.+.
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~~~~p~~~~----------------- 183 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGT----------------- 183 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHTTHHHHHH-----------------
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHHHHhHHHHH-----------------
Confidence 456677888899999999999999999999999999999999999999999988777776651
Q ss_pred hhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q psy15368 130 ADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPITA 209 (522)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~ 209 (522)
....+.|..+...|++..++..++..+|++++++||+|||++|++|++|
T Consensus 184 -------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~ 232 (434)
T 4ea3_A 184 -------------------------------DILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRA 232 (434)
T ss_dssp -------------------------------HHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred -------------------------------HHHhcCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEccccc
Confidence 1123669999999999999999999999999999999999999999999
Q ss_pred CCCCCccchhhhhHHHHHHHHHHHHHHhhheeEEccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy15368 210 PNLRTPFISKVVSFIAWTASAIFMIPVIMYASIIDSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVFYYL 289 (522)
Q Consensus 210 ~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~ 289 (522)
++.++++++..+++++|++++++++|.++............|...+..... .....|.....++.+++|+++++++|.+
T Consensus 233 ~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~~~~~~~~~~~~ip~~ii~~~y~~ 311 (434)
T 4ea3_A 233 LDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTPQD-YWGPVFAICIFLFSFIVPVLVISVCYSL 311 (434)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCCEEECCCSSHH-HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCceeEEEecCChHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888777666666778877655422 1234567777888899999999999999
Q ss_pred HHHHHHhcCCCCCchhhhccccccceeeeEEeEeeecCCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHh
Q psy15368 290 VIRKLRTVGPKNKPKEKKKSHRKVTKLVLTVITLRTVGPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIF 369 (522)
Q Consensus 290 I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~ 369 (522)
|++.+|+++++.+. +++.++++|.++++++++++|++||+|+.+..++..+
T Consensus 312 I~~~l~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~ 362 (434)
T 4ea3_A 312 MIRRLRGVRLLSGS-----------------------------REKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGL 362 (434)
T ss_dssp HHHHHTTCSSCSSC-----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhccccccc-----------------------------hhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999876544322 2334678899999999999999999999999988776
Q ss_pred cCCCCCCCchhHHHHHHHHHHHhhccchhHHHHHHcChHHHHHHHHHccccCCCC
Q psy15368 370 TPPRQCQSSITVIVFLIAGALSYSNSAMNPILYAFLSDNFKKSFLKACTCAAGKD 424 (522)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~l~~~~~c~~~~~ 424 (522)
.... .......+..+..++.++|+++||+||++++++||+++++++||++.++
T Consensus 363 ~~~~--~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~~~~~ 415 (434)
T 4ea3_A 363 GVQP--SSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCCASALGR 415 (434)
T ss_dssp TCCC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC----------
T ss_pred ccCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC
Confidence 5432 2333445667777899999999999999999999999999887766443
No 11
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=2.5e-42 Score=357.51 Aligned_cols=323 Identities=22% Similarity=0.298 Sum_probs=241.3
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhh-ccchhheehhhccchhhhhhhhhh
Q psy15368 51 PTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLI-GIPFLMITIKMQTVTNMYIVNLAI 129 (522)
Q Consensus 51 ~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l-~~p~~~~~~~~~~~~~~~~~~~~~ 129 (522)
.....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|+++++ .+|+.+.
T Consensus 18 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~----------------- 80 (488)
T 3eml_A 18 IMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT----------------- 80 (488)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHH-----------------
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 3446678899999999999999999999999999999999999999999999854 5565441
Q ss_pred hhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q psy15368 130 ADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPITA 209 (522)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~ 209 (522)
....|..+...|++..++..++..+|++++++||+|||++|++|++|
T Consensus 81 ---------------------------------~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~ 127 (488)
T 3eml_A 81 ---------------------------------ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRY 127 (488)
T ss_dssp ---------------------------------HTTCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGS
T ss_pred ---------------------------------HhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeccccc
Confidence 11368888899999999999999999999999999999999999999
Q ss_pred CCCCCccchhhhhHHHHHHHHHHHHHHhhheeEEcc-----CCccccccccCCC--cccCccchhhhHHHHHHHHHHHHH
Q psy15368 210 PNLRTPFISKVVSFIAWTASAIFMIPVIMYASIIDS-----ENTKSCNIMWPET--ENLNGQSAFILYTFILGFAIPLVL 282 (522)
Q Consensus 210 ~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~~~-----~~~~~C~~~~~~~--~~~~~~~~~~~~~~~~~~~lp~~i 282 (522)
+..++++++..+++++|++++++++|.++.+..... .....|...+... ........|.++..++.+++|+++
T Consensus 128 ~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~i 207 (488)
T 3eml_A 128 NGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLL 207 (488)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CCSSCTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccceeeccccccchhHHHhHHHHHHHHHHHH
Confidence 999999999999999999999999887765432211 1124455443211 111223345566678889999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCchhhhccccccce------eeeEEeEeeec------------------------------
Q psy15368 283 IFVFYYLVIRKLRTVGPKNKPKEKKKSHRKVTK------LVLTVITLRTV------------------------------ 326 (522)
Q Consensus 283 i~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~------------------------------ 326 (522)
++++|.+|++.++++.++.+........+.... ...........
T Consensus 208 i~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (488)
T 3eml_A 208 MLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEK 287 (488)
T ss_dssp HHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESSSCHHHHHHHHHHHHTSCCTTBCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceeccccccCCCCccccccccccccCCCCCCCCCCChhhhcc
Confidence 999999999999987766443221110000000 00000000000
Q ss_pred --------------------------------------------------------------------------------
Q psy15368 327 -------------------------------------------------------------------------------- 326 (522)
Q Consensus 327 -------------------------------------------------------------------------------- 326 (522)
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (488)
T 3eml_A 288 LFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNR 367 (488)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHHHHTTCHHHHHHHHTTCHHHHHHHHTTSHHHHHCHHH
T ss_pred CcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCCCccCCCCcchhhhhccccccccCcccccCcccccch
Confidence
Q ss_pred ----------CCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHhhccc
Q psy15368 327 ----------GPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIFTPPRQCQSSITVIVFLIAGALSYSNSA 396 (522)
Q Consensus 327 ----------~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~ 396 (522)
......+++.++++|+++++++++++|++||+|+.++.++..+.+.. .....++..+..++.++|++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~---~~~~~~~~~~~~~l~~~ns~ 444 (488)
T 3eml_A 368 AKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC---SHAPLWLMYLAIVLSHTNSV 444 (488)
T ss_dssp HHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS---CCCCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCcc---ccccHHHHHHHHHHHHHHhh
Confidence 00001122356889999999999999999999999999998887542 23345577889999999999
Q ss_pred hhHHHHHHcChHHHHHHHHHccccCCCCcc
Q psy15368 397 MNPILYAFLSDNFKKSFLKACTCAAGKDVN 426 (522)
Q Consensus 397 ~NPiIY~~~~~~fR~~l~~~~~c~~~~~~~ 426 (522)
+||+||++++++||++++++++|++++..+
T Consensus 445 ~NPiIY~~~~~~fR~~~~~l~~~~~~~~~~ 474 (488)
T 3eml_A 445 VNPFIYAYRIREFRQTFRKIIRSHVLRQQE 474 (488)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHTTSCC--
T ss_pred hchhhhhhcCHHHHHHHHHHHhhcccccCC
Confidence 999999999999999999999887765543
No 12
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=2.4e-42 Score=360.03 Aligned_cols=316 Identities=18% Similarity=0.245 Sum_probs=223.7
Q ss_pred CCchH-HHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhhccchhheehhhccchhhhhhhhh
Q psy15368 50 GPTLF-FATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLIGIPFLMITIKMQTVTNMYIVNLA 128 (522)
Q Consensus 50 ~~~~~-~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l~~p~~~~~~~~~~~~~~~~~~~~ 128 (522)
.+... .+..+++.+++++|++||+++++++.+++++|+++|+|++|||++||++++..++..+
T Consensus 58 ~~~~~~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~---------------- 121 (520)
T 3v2y_A 58 DKENSIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLL---------------- 121 (520)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHH----------------
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 34444 7888999999999999999999999999999999999999999999998765433331
Q ss_pred hhhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCC
Q psy15368 129 IADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPIT 208 (522)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~ 208 (522)
......|..+...|++..++..++..+|++++++||+|||+||+ |++
T Consensus 122 --------------------------------~~~~~~~~~~~~~c~~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~~ 168 (520)
T 3v2y_A 122 --------------------------------LSGATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITML-KMK 168 (520)
T ss_dssp --------------------------------HSGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C--
T ss_pred --------------------------------HccccceeeCccccchHHHHHHHHHHHHHHHHHHHHHHHhhEEe-ccc
Confidence 01236788899999999999999999999999999999999999 999
Q ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHHhhheeEEccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHHHH
Q psy15368 209 APNLRTPFISKVVSFIAWTASAIFMIPVIMYASIIDSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVFYY 288 (522)
Q Consensus 209 ~~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~ 288 (522)
|+..++++++..+++++|++++++++|+++.+... .+...|...++.. ...|.. ..++.+++|+++++++|.
T Consensus 169 ~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~--~~~~~C~~~~~~~-----~~~~~~-~~~~~~~lPl~ii~~~Y~ 240 (520)
T 3v2y_A 169 LHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI--SALSSCSTVLPLY-----HKHYIL-FCTTVFTLLLLSIVILYC 240 (520)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT--TCGGGBCSSSTTB-----BHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc--cCCCcccccCCcc-----chHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988776654432 4446787766432 334443 345569999999999999
Q ss_pred HHHHHHHhcC----------CCCCchhhhccc-cccceeeeEE-------------------------------------
Q psy15368 289 LVIRKLRTVG----------PKNKPKEKKKSH-RKVTKLVLTV------------------------------------- 320 (522)
Q Consensus 289 ~I~~~lr~~~----------~~~~~~~~~~~~-~~~~~~~~~~------------------------------------- 320 (522)
+|++.+|++. .+.+........ ..........
T Consensus 241 ~I~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~t~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~ 320 (520)
T 3v2y_A 241 RIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVD 320 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCSSCEECSSSSEEETTTEECCSSSCHHHHHHHHHHHHTSCCTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHhhhhhhhccccccceeEecccccccccccccccchhhhHHHHhcCCcccHHHhhhHHHhccc
Confidence 9999998864 111000000000 0000000000
Q ss_pred ---------------------------------------eEee-------------------------------------
Q psy15368 321 ---------------------------------------ITLR------------------------------------- 324 (522)
Q Consensus 321 ---------------------------------------~~~~------------------------------------- 324 (522)
....
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~r~~r~~~~ 400 (520)
T 3v2y_A 321 AAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITT 400 (520)
T ss_dssp HHHHHHTTCTTTHHHHHHSCHHHHHHHHHHHHHSCHHHHHTCHHHHHHHHTTCHHHHHHHHHHSHHHHHSHHHHHHHHHH
T ss_pred cccccccccccCCCcCCccchhhhHHHHHHHHccCCCcccccccccccccccchhhHhhhhhccchhhhcccchhhHHHH
Confidence 0000
Q ss_pred -ecCCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHhhccchhHHHHH
Q psy15368 325 -TVGPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIFTPPRQCQSSITVIVFLIAGALSYSNSAMNPILYA 403 (522)
Q Consensus 325 -~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~ 403 (522)
..+.......+.++++|+++++++++++|++||+|+.+..++..+.+...... .....+..++.++|+++||+||+
T Consensus 401 ~~~~~~~~~~~~~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~---~~~~~~~~~l~~~ns~~NPiiY~ 477 (520)
T 3v2y_A 401 FRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDI---LFRAEYFLVLAVLNSGTNPIIYT 477 (520)
T ss_dssp HHHCSGGGTCSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCST---TTSCHHHHHHHHHGGGTHHHHHH
T ss_pred hhcchhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000001112336889999999999999999999999999988765432222 12344567799999999999999
Q ss_pred HcChHHHHHHHHHccccCCCCc
Q psy15368 404 FLSDNFKKSFLKACTCAAGKDV 425 (522)
Q Consensus 404 ~~~~~fR~~l~~~~~c~~~~~~ 425 (522)
+++++||++++++++|+..+..
T Consensus 478 ~~~~~fr~~~~~~~~~~~~~~~ 499 (520)
T 3v2y_A 478 LTNKEMRRAFIRIMGRPLEVLF 499 (520)
T ss_dssp HHCHHHHHHHHTTCCSCC----
T ss_pred HcCHHHHHHHHHHHHHhccccc
Confidence 9999999999999988765543
No 13
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=352.08 Aligned_cols=311 Identities=22% Similarity=0.370 Sum_probs=232.1
Q ss_pred chHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhh-ccchhheehhhccchhhhhhhhhhh
Q psy15368 52 TLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLI-GIPFLMITIKMQTVTNMYIVNLAIA 130 (522)
Q Consensus 52 ~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l-~~p~~~~~~~~~~~~~~~~~~~~~~ 130 (522)
....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|+++++ .+|+.+..
T Consensus 36 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~----------------- 98 (481)
T 3pbl_A 36 RPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYL----------------- 98 (481)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHH-----------------
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 445667788999999999999999999999999999999999999999999854 55554410
Q ss_pred hhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCCC-
Q psy15368 131 DECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPITA- 209 (522)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~- 209 (522)
....+.|.++...|++..++..++..+|++++++||+|||++|++|++|
T Consensus 99 ------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~ 148 (481)
T 3pbl_A 99 ------------------------------EVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQ 148 (481)
T ss_dssp ------------------------------HHTTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred ------------------------------HHhcCccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 0123679999999999999999999999999999999999999999999
Q ss_pred --CCCCCccchhhhhHHHHHHHHHHHHHHhhheeEEccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHHH
Q psy15368 210 --PNLRTPFISKVVSFIAWTASAIFMIPVIMYASIIDSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVFY 287 (522)
Q Consensus 210 --~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y 287 (522)
....+++++..+++++|++++++++|.++..... .....|... ...|..+..++.+++|+++++++|
T Consensus 149 ~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~--~~~~~C~~~---------~~~~~~~~~~~~~~ip~~ii~~~y 217 (481)
T 3pbl_A 149 HGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTT--GDPTVCSIS---------NPDFVIYSSVVSFYLPFGVTVLVY 217 (481)
T ss_dssp HTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCC--SSTTCCSCC---------CHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHheeccc--CCCCccccc---------CccHHHHHHHHHHHHHHHHHHHHH
Confidence 6778889999999999999999999987755432 333456543 235677788889999999999999
Q ss_pred HHHHHHHHhcCCCCCchhhhccccccceeeeEEe--------Eeeec---------------------------------
Q psy15368 288 YLVIRKLRTVGPKNKPKEKKKSHRKVTKLVLTVI--------TLRTV--------------------------------- 326 (522)
Q Consensus 288 ~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~--------------------------------- 326 (522)
++|++.++++.++..................... .....
T Consensus 218 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (481)
T 3pbl_A 218 ARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFN 297 (481)
T ss_dssp HHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEEETTTEEEESSSCHHHHHHHHHHHHTSCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhhhhccccchhccccccCcccceeecccccccCCcccccCCCcccchhccCCCceeccCCchhccc
Confidence 9999999988766433221111000000000000 00000
Q ss_pred --------------------------------------------------------------------------------
Q psy15368 327 -------------------------------------------------------------------------------- 326 (522)
Q Consensus 327 -------------------------------------------------------------------------------- 326 (522)
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (481)
T 3pbl_A 298 QDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKR 377 (481)
T ss_dssp HHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHHTSHHHHHSHHHHHH
T ss_pred CCcccccccccccCccCccccccccccchhccccccccCCCCCCCcccccchhccccccccchhhhccccccCCcccccc
Confidence
Q ss_pred ------CCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHhhccchhHH
Q psy15368 327 ------GPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIFTPPRQCQSSITVIVFLIAGALSYSNSAMNPI 400 (522)
Q Consensus 327 ------~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPi 400 (522)
..........++++|+++++++++++|++||+|+.+..++..+.+.. .....+..+..+|.++|+++||+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~----~~~~~~~~~~~~L~~~ns~~NPi 453 (481)
T 3pbl_A 378 VITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTC----HVSPELYSATTWLGYVNSALNPV 453 (481)
T ss_dssp HHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSC----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeecccccccccccchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccc----cCcHHHHHHHHHHHHHhhccchH
Confidence 00000111223689999999999999999999999999988776432 23445778889999999999999
Q ss_pred HHHHcChHHHHHHHHHccccCCCC
Q psy15368 401 LYAFLSDNFKKSFLKACTCAAGKD 424 (522)
Q Consensus 401 IY~~~~~~fR~~l~~~~~c~~~~~ 424 (522)
||++++++||++++++++|+++.+
T Consensus 454 IY~~~~~~fR~~~~~ll~c~~~~~ 477 (481)
T 3pbl_A 454 IYTTFNIEFRKAFLKILSCGRPLE 477 (481)
T ss_dssp HHHHHCHHHHHHHHHHHCC-----
T ss_pred HHHHcCHHHHHHHHHHHhccCcHH
Confidence 999999999999999998877544
No 14
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=7.6e-42 Score=350.39 Aligned_cols=314 Identities=23% Similarity=0.413 Sum_probs=235.5
Q ss_pred chHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhh-hccchhheehhhccchhhhhhhhhhh
Q psy15368 52 TLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFL-IGIPFLMITIKMQTVTNMYIVNLAIA 130 (522)
Q Consensus 52 ~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~-l~~p~~~~~~~~~~~~~~~~~~~~~~ 130 (522)
...++..+++.+++++|++||+++++++.+++++|++.++|++|||++|++++ +.+|+.+
T Consensus 6 ~~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~------------------- 66 (452)
T 3rze_A 6 PQLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNI------------------- 66 (452)
T ss_dssp ---CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHH-------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 34556778899999999999999999999999999999999999999999985 4566655
Q ss_pred hhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q psy15368 131 DECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPITAP 210 (522)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~ 210 (522)
.....+.|.++...|++..++..++..+|++++++||+|||++|++|++|+
T Consensus 67 -----------------------------~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~ 117 (452)
T 3rze_A 67 -----------------------------LYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYL 117 (452)
T ss_dssp -----------------------------HHHHSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTT
T ss_pred -----------------------------HHHHcCCccCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHheeCccccc
Confidence 112346899999999999999999999999999999999999999999999
Q ss_pred CCCCccchhhhhHHHHHHHHHHHHHHhhheeEEccC---CccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHHH
Q psy15368 211 NLRTPFISKVVSFIAWTASAIFMIPVIMYASIIDSE---NTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVFY 287 (522)
Q Consensus 211 ~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~~~~---~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y 287 (522)
..++++++..+++++|++++++++|.+++....... ....|..++.. ...|..+..++.+++|+++++++|
T Consensus 118 ~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~------~~~~~~~~~~~~~~~p~~ii~~~y 191 (452)
T 3rze_A 118 KYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETDFYD------VTWFKVMTAIINFYLPTLLMLWFY 191 (452)
T ss_dssp TTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------CCSSSSCCSCTT------CHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCeecCCCcc------cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987765544332 33567655433 345777888899999999999999
Q ss_pred HHHHHHHHhcCCCCCchhhhccccccce------eeeEEeEeeec-----------------------------------
Q psy15368 288 YLVIRKLRTVGPKNKPKEKKKSHRKVTK------LVLTVITLRTV----------------------------------- 326 (522)
Q Consensus 288 ~~I~~~lr~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~----------------------------------- 326 (522)
.+|++.+|++.++.+........+.... ...........
T Consensus 192 ~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 271 (452)
T 3rze_A 192 AKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQD 271 (452)
T ss_dssp HHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECSSCSSHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccccCCCCCcccccccCCCCCCCCccccCCcccchhcCC
Confidence 9999999887655332221111000000 00000000000
Q ss_pred --------------------------------------------------------------------------------
Q psy15368 327 -------------------------------------------------------------------------------- 326 (522)
Q Consensus 327 -------------------------------------------------------------------------------- 326 (522)
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (452)
T 3rze_A 272 VDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVI 351 (452)
T ss_dssp HHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSCHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHH
T ss_pred CcccccCcccccccCCcccCCCccccccccccccccCCCCCCccccCcchhhhcCCccccccccCCccCCCCCcccchhh
Confidence
Q ss_pred ----CCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHhhccchhHHHH
Q psy15368 327 ----GPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIFTPPRQCQSSITVIVFLIAGALSYSNSAMNPILY 402 (522)
Q Consensus 327 ----~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY 402 (522)
....+..++.++|+|+++++++++++|++||+|+.+..++..+.+... ...+..+..++.++|+++||+||
T Consensus 352 ~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~~-----~~~~~~~~~~L~~~ns~~NPiIY 426 (452)
T 3rze_A 352 TTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCC-----NEHLHMFTIWLGYINSTLNPLIY 426 (452)
T ss_dssp HHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCS-----CTTTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcccc-----cHHHHHHHHHHHHHHhcccchhh
Confidence 000011123457899999999999999999999999999988765422 12255688889999999999999
Q ss_pred HHcChHHHHHHHHHccccCCCC
Q psy15368 403 AFLSDNFKKSFLKACTCAAGKD 424 (522)
Q Consensus 403 ~~~~~~fR~~l~~~~~c~~~~~ 424 (522)
++++++||++++++++|+++++
T Consensus 427 ~~~~~~fR~~~~~ll~~~~~~~ 448 (452)
T 3rze_A 427 PLCNENFKKTFKRILHIRSGEN 448 (452)
T ss_dssp HHHCHHHHHHHHHHHTC-----
T ss_pred hhccHHHHHHHHHHHHhccccc
Confidence 9999999999999999887554
No 15
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=2e-41 Score=329.87 Aligned_cols=296 Identities=24% Similarity=0.403 Sum_probs=230.9
Q ss_pred chHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhh-ccchhheehhhccchhhhhhhhhhh
Q psy15368 52 TLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLI-GIPFLMITIKMQTVTNMYIVNLAIA 130 (522)
Q Consensus 52 ~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l-~~p~~~~~~~~~~~~~~~~~~~~~~ 130 (522)
.......+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++ .+|+.+.
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~------------------ 70 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGAT------------------ 70 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHH------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHH------------------
Confidence 456678889999999999999999999999999999999999999999999754 5555441
Q ss_pred hhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q psy15368 131 DECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPITAP 210 (522)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~ 210 (522)
....+.|.+++..|++..++..++..+|++++++||+|||++|++|++|+
T Consensus 71 ------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~ 120 (315)
T 4amj_A 71 ------------------------------LVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQ 120 (315)
T ss_dssp ------------------------------HHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred ------------------------------HHhcCCeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence 11236799999999999999999999999999999999999999999999
Q ss_pred CCCCccchhhhhHHHHHHHHHHHHHHhhhe-eEEccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy15368 211 NLRTPFISKVVSFIAWTASAIFMIPVIMYA-SIIDSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVFYYL 289 (522)
Q Consensus 211 ~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~-~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~ 289 (522)
+.++++++..+++++|++++++++|+.... ..........|..++...+ ......|.....++.+++|+++++++|.+
T Consensus 121 ~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~-~~~~~~~~~~~~~~~~~ip~~ii~~~y~~ 199 (315)
T 4amj_A 121 SLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCD-FVTNRAYAIASSIISFYIPLLIMIFVALR 199 (315)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCC-CCCCHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_pred cccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCccccccccccch-hhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999987665543 2222222345655443221 13355777777888899999999999999
Q ss_pred HHHHHHhcCCCCCchhhhccccccceeeeEEeEeeecCCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHh
Q psy15368 290 VIRKLRTVGPKNKPKEKKKSHRKVTKLVLTVITLRTVGPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALIF 369 (522)
Q Consensus 290 I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~~ 369 (522)
+++.++++.++.+....+ +..++..++++|.++++++++++|++||+|+.+..++..+
T Consensus 200 i~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~ 257 (315)
T 4amj_A 200 VYREAKEQIRKIDRASKR----------------------KTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVF 257 (315)
T ss_dssp HHHHHHTC----------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCccccc----------------------ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999876654433221 1223445678999999999999999999999999998887
Q ss_pred cCCCCCCCchhHHHHHHHHHHHhhccchhHHHHHHcChHHHHHHHHHccccCCCC
Q psy15368 370 TPPRQCQSSITVIVFLIAGALSYSNSAMNPILYAFLSDNFKKSFLKACTCAAGKD 424 (522)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~l~~~~~c~~~~~ 424 (522)
.... .......+..++.++|+++||+||+ ++++||++++++++|++.+.
T Consensus 258 ~~~~-----~~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~~~~~ 306 (315)
T 4amj_A 258 NRDL-----VPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPRKAD 306 (315)
T ss_dssp CTTS-----SCHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC------
T ss_pred cCcc-----chHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCCCcch
Confidence 6432 2344677788899999999999999 99999999999998876544
No 16
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=1e-40 Score=341.69 Aligned_cols=297 Identities=22% Similarity=0.430 Sum_probs=235.0
Q ss_pred chHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhh--ccchhheehhhccchhhhhhhhhh
Q psy15368 52 TLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLI--GIPFLMITIKMQTVTNMYIVNLAI 129 (522)
Q Consensus 52 ~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l--~~p~~~~~~~~~~~~~~~~~~~~~ 129 (522)
....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|+++++ ++|+.+.
T Consensus 32 ~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~----------------- 94 (448)
T 2z73_A 32 AVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTI----------------- 94 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHH-----------------
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHH-----------------
Confidence 456778889999999999999999999999999999999999999999998765 3555441
Q ss_pred hhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q psy15368 130 ADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPITA 209 (522)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~ 209 (522)
....+.|.++...|++..++..++..+|++++++||+|||++|++|++|
T Consensus 95 -------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~ 143 (448)
T 2z73_A 95 -------------------------------SCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAA 143 (448)
T ss_dssp -------------------------------HHHTTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTT
T ss_pred -------------------------------HHhcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 1123678999999999999999999999999999999999999999999
Q ss_pred CCCCCccchhhhhHHHHHHHHHHHHHHhhhe-eEEccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHHHH
Q psy15368 210 PNLRTPFISKVVSFIAWTASAIFMIPVIMYA-SIIDSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVFYY 288 (522)
Q Consensus 210 ~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~-~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~ 288 (522)
+++++++++..+++++|+++++++++.++.+ ..........|..++...+ .....|.....++.+++|+++++++|.
T Consensus 144 ~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~~~~~~~~~~~~~~~lP~~ii~~~y~ 221 (448)
T 2z73_A 144 SKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRD--STTRSNILCMFILGFFGPILIIFFCYF 221 (448)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSEEECCSCCS--HHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred cceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeEecccccCC--cchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988766544 3333344456777665432 123456666777789999999999999
Q ss_pred HHHHHHHhcCCCCCchhhhccccccceeeeEEeEeeecCCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHH
Q psy15368 289 LVIRKLRTVGPKNKPKEKKKSHRKVTKLVLTVITLRTVGPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIALI 368 (522)
Q Consensus 289 ~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~~ 368 (522)
+|++.++++.++.+....+..... .++.++..++++|++|++++++++|++||+|+.+..++..
T Consensus 222 ~I~~~l~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~ 285 (448)
T 2z73_A 222 NIVMSVSNHEKEMAAMAKRLNAKE----------------LRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQ 285 (448)
T ss_dssp HHHTTHHHHHHHHHHHHTTTCCTT----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHH----------------HHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999999876543322211100000 0011223456889999999999999999999999998887
Q ss_pred hcCCCCCCCchhHHHHHHHHHHHhhccchhHHHHHHcChHHHHHHHHHcc
Q psy15368 369 FTPPRQCQSSITVIVFLIAGALSYSNSAMNPILYAFLSDNFKKSFLKACT 418 (522)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~l~~~~~ 418 (522)
+.... ........+..++.++|+++||+||++++++||++++++++
T Consensus 286 ~~~~~----~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~ 331 (448)
T 2z73_A 286 FGPLE----WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFP 331 (448)
T ss_dssp HSCGG----GCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCG
T ss_pred hCCcc----cCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHH
Confidence 75431 12234667778899999999999999999999999999885
No 17
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=1.4e-41 Score=347.93 Aligned_cols=322 Identities=21% Similarity=0.309 Sum_probs=233.0
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhh-hccchhheehhhccchhhhhhhhhh
Q psy15368 51 PTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFL-IGIPFLMITIKMQTVTNMYIVNLAI 129 (522)
Q Consensus 51 ~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~-l~~p~~~~~~~~~~~~~~~~~~~~~ 129 (522)
.....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++++ +.+|+.+.
T Consensus 28 ~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~----------------- 90 (447)
T 4eiy_A 28 IMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT----------------- 90 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHH-----------------
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 345667888999999999999999999999999999999999999999999985 45665541
Q ss_pred hhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q psy15368 130 ADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPITA 209 (522)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~ 209 (522)
....|..+...|++..++..++..+|++++++||+|||++|++|++|
T Consensus 91 ---------------------------------~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~ 137 (447)
T 4eiy_A 91 ---------------------------------ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRY 137 (447)
T ss_dssp ---------------------------------HHTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred ---------------------------------HhcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEeccccc
Confidence 11457778889999999999999999999999999999999999999
Q ss_pred CCCCCccchhhhhHHHHHHHHHHHHHHhhheeEEccCC-----ccccccccCCC--cccCccchhhhHHHHHHHHHHHHH
Q psy15368 210 PNLRTPFISKVVSFIAWTASAIFMIPVIMYASIIDSEN-----TKSCNIMWPET--ENLNGQSAFILYTFILGFAIPLVL 282 (522)
Q Consensus 210 ~~~~t~~~~~~~i~~~Wi~s~~~~~p~~~~~~~~~~~~-----~~~C~~~~~~~--~~~~~~~~~~~~~~~~~~~lp~~i 282 (522)
+.+++++++..+++++|++++++++|.++.+....... ...|...+... ........+.++..++.+++|+++
T Consensus 138 ~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~i 217 (447)
T 4eiy_A 138 NGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLL 217 (447)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTCCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHH
T ss_pred chhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCccccccccccccchhhccccccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988776543322111 12343332111 111112233334455668999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCchhhhcccc-------------------------ccceeeeEEeEeeecC-C--------
Q psy15368 283 IFVFYYLVIRKLRTVGPKNKPKEKKKSHR-------------------------KVTKLVLTVITLRTVG-P-------- 328 (522)
Q Consensus 283 i~~~y~~I~~~lr~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~-~-------- 328 (522)
++++|.+|++.+|++.++.+......... .............+.. +
T Consensus 218 i~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (447)
T 4eiy_A 218 MLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHG 297 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHC---------------CHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhccchhhhccCCCCCCCCCCCCcCCCCCCcccccccCC
Confidence 99999999999998654433211000000 0000000000000000 0
Q ss_pred -----------------------------------------CCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHH
Q psy15368 329 -----------------------------------------KNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIAL 367 (522)
Q Consensus 329 -----------------------------------------~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~~ 367 (522)
....+++.++++|++|++++++++|++||+|+.+..++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~ 377 (447)
T 4eiy_A 298 FDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFT 377 (447)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccchhHHHHHHHHHHHHHHHhhhhhheeccHHHHHHHHH
Confidence 011123456789999999999999999999999999988
Q ss_pred HhcCCCCCCCchhHHHHHHHHHHHhhccchhHHHHHHcChHHHHHHHHHccccCCCCc
Q psy15368 368 IFTPPRQCQSSITVIVFLIAGALSYSNSAMNPILYAFLSDNFKKSFLKACTCAAGKDV 425 (522)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~l~~~~~c~~~~~~ 425 (522)
.+.+.. .....++..+..++.++|+++||+||++++++||++++++++|+.++..
T Consensus 378 ~~~~~~---~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~~r~~ 432 (447)
T 4eiy_A 378 FFCPDC---SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQ 432 (447)
T ss_dssp HHCTTS---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC----
T ss_pred HhcCcc---cccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHHHhccC
Confidence 876542 2334557788999999999999999999999999999999988776543
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=6.6e-40 Score=341.43 Aligned_cols=317 Identities=23% Similarity=0.385 Sum_probs=230.6
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhh-ccchhheehhhccchhhhhhhh
Q psy15368 49 TGPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLI-GIPFLMITIKMQTVTNMYIVNL 127 (522)
Q Consensus 49 ~~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l-~~p~~~~~~~~~~~~~~~~~~~ 127 (522)
.++....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|+++++ .+|+.+.
T Consensus 177 ~~~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~--------------- 241 (514)
T 3sn6_R 177 ADEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAA--------------- 241 (514)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHH---------------
T ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHH---------------
Confidence 345667788899999999999999999999999999999999999999999999755 4555441
Q ss_pred hhhhhhhhhcccceeeehhhhhhhHHhhhHhhhcccCCccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy15368 128 AIADECFLIGIPFLMITMSISYWHYILVSLFRVASLSSYWPFGDLMCKIYMTTTSINQFTSSIFLTIMSADRYVAVCHPI 207 (522)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~ 207 (522)
....+.|.++...|++..++..++..+|++++++||+|||++|++|+
T Consensus 242 ---------------------------------~~~~~~~~~~~~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl 288 (514)
T 3sn6_R 242 ---------------------------------HILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPF 288 (514)
T ss_dssp ---------------------------------HHHHTSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred ---------------------------------HHHcCCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 11236799999999999999999999999999999999999999999
Q ss_pred CCCCCCCccchhhhhHHHHHHHHHHHHHHh-hheeEEccCCccccccccCCCcccCccchhhhHHHHHHHHHHHHHHHHH
Q psy15368 208 TAPNLRTPFISKVVSFIAWTASAIFMIPVI-MYASIIDSENTKSCNIMWPETENLNGQSAFILYTFILGFAIPLVLIFVF 286 (522)
Q Consensus 208 ~~~~~~t~~~~~~~i~~~Wi~s~~~~~p~~-~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~ 286 (522)
+|+..++++++..+++++|++++++++++. +.+..........|........ ......|.+...++.+++|+++++++
T Consensus 289 ~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~~-~~~~~~y~~~~~~~~~~lP~~ii~~~ 367 (514)
T 3sn6_R 289 KYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCD-FFTNQAYAIASSIVSFYVPLVIMVFV 367 (514)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCCC-CCCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeecccccc-cccccHHHHHHHHHHHHHHHHHHHHH
Confidence 999989999999999999999999875443 3332222222234443322111 12345788888899999999999999
Q ss_pred HHHHHHHHHhcCCCCCchhhhccccccceeeeEEeEeeecCCCCCchhhhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHH
Q psy15368 287 YYLVIRKLRTVGPKNKPKEKKKSHRKVTKLVLTVITLRTVGPKNKPKEKKKSHRKVTKLVLTVITVYVLCWLPYWITQIA 366 (522)
Q Consensus 287 y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~f~i~~~P~~i~~i~ 366 (522)
|.+|++.+|++.++.+.......... ........+.....++..+..++++|.++++++++++|++||+|+.+..++
T Consensus 368 y~~I~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~lcwlP~~i~~~~ 444 (514)
T 3sn6_R 368 YSRVFQEAKRQLQKIDKSEGRFHVQN---LSQVEQDGRTGHGLRRSSKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIV 444 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHCCC----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccccccc---cccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999876543322211100000 000000011111122233445678999999999999999999999999998
Q ss_pred HHhcCCCCCCCchhHHHHHHHHHHHhhccchhHHHHHHcChHHHHHHHHHccccCCC
Q psy15368 367 LIFTPPRQCQSSITVIVFLIAGALSYSNSAMNPILYAFLSDNFKKSFLKACTCAAGK 423 (522)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~l~~~~~c~~~~ 423 (522)
..+... .....+..+..++.++|+++||+||+ ++++||+++++++||++++
T Consensus 445 ~~~~~~-----~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~~~ 495 (514)
T 3sn6_R 445 HVIQDN-----LIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRRSS 495 (514)
T ss_dssp HHHSTT-----SSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC-----
T ss_pred HHHccc-----ccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCccc
Confidence 877533 12344677888999999999999999 9999999999999876643
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.51 E-value=1.2e-08 Score=64.73 Aligned_cols=38 Identities=37% Similarity=0.597 Sum_probs=33.6
Q ss_pred HHHHHHHHHhhccchhHHHHHHcChHHHHHHHHHcccc
Q psy15368 383 VFLIAGALSYSNSAMNPILYAFLSDNFKKSFLKACTCA 420 (522)
Q Consensus 383 ~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~l~~~~~c~ 420 (522)
++.++.++.++|+++||+||++.+++||++++++++|+
T Consensus 2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~~ 39 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSA 39 (40)
T ss_dssp HHHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhhc
Confidence 34567788999999999999999999999999988765
No 20
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.47 E-value=5.1e-08 Score=58.34 Aligned_cols=31 Identities=32% Similarity=0.386 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCCccc
Q psy15368 187 TSSIFLTIMSADRYVAVCHPITAPNLRTPFI 217 (522)
Q Consensus 187 ~s~~~l~~isidRy~aI~~P~~~~~~~t~~~ 217 (522)
+|++++++||+|||++|++|++|+..+++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~~ 32 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPRR 32 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCCC
Confidence 6889999999999999999999988877653
No 21
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=97.78 E-value=4.8e-06 Score=49.78 Aligned_cols=29 Identities=21% Similarity=0.495 Sum_probs=25.5
Q ss_pred hhhhhhhhHHHHHHHHhhhhhHHHHHHHH
Q psy15368 339 HRKVTKLVLTVITVYVLCWLPYWITQIAL 367 (522)
Q Consensus 339 ~~~~~~~l~~i~~~f~i~~~P~~i~~i~~ 367 (522)
|+|.+|++.+++++|++||+||.+..++.
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHS 29 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence 46889999999999999999999987653
No 22
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=97.01 E-value=9.8e-05 Score=50.76 Aligned_cols=30 Identities=30% Similarity=0.577 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHhhhcccc
Q psy15368 56 ATQTIYLIICITGLLGNTLVIYVVLRFSKM 85 (522)
Q Consensus 56 ~~~~i~~ii~~~giigN~lvi~vi~~~~~l 85 (522)
+..+++.+++++|++||+++++++.++|--
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 678899999999999999999999887653
No 23
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=95.08 E-value=2.4 Score=40.31 Aligned_cols=18 Identities=50% Similarity=0.792 Sum_probs=14.1
Q ss_pred ccchhhhhhhhhhhhhhh
Q psy15368 117 QTVTNMYIVNLAIADECF 134 (522)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~ 134 (522)
+...|.|+.+++++|+..
T Consensus 64 ~~~~~~~l~~LaiaDll~ 81 (364)
T 2ks9_A 64 RTVTNYFLVNLAFAEASM 81 (364)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHH
Confidence 456688899999999654
No 24
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=94.77 E-value=1.7 Score=42.78 Aligned_cols=21 Identities=57% Similarity=0.865 Sum_probs=16.0
Q ss_pred hccchhhhhhhhhhhhhhhhh
Q psy15368 116 MQTVTNMYIVNLAIADECFLI 136 (522)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~ 136 (522)
.+...|+|+.+++++|+...+
T Consensus 156 l~~~~~~ll~~LAvsDll~~~ 176 (434)
T 4ea3_A 156 MKTATNIYIFNLALADTLVLL 176 (434)
T ss_dssp CCCHHHHHHHHHHHHHHHHHT
T ss_pred cCchhHHHHHHHHHHHHHHHH
Confidence 356678899999999976543
No 25
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=84.38 E-value=26 Score=32.52 Aligned_cols=58 Identities=16% Similarity=0.161 Sum_probs=39.1
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhhccchhheehhhccchhhhhhhhhh
Q psy15368 50 GPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLIGIPFLMITIKMQTVTNMYIVNLAI 129 (522)
Q Consensus 50 ~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l~~p~~~~~~~~~~~~~~~~~~~~~ 129 (522)
.........++..+..+++++|=+..++++..-.+.++ .+...|.|+.++++
T Consensus 31 ~~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~----------------------------~~~~~~~ll~~Lai 82 (349)
T 1u19_A 31 YLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKK----------------------------LRTPLNYILLNLAV 82 (349)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT----------------------------CCSHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhh----------------------------hcCchhHHHHHHHH
Confidence 34455666666677778888887777777765444322 24456778889999
Q ss_pred hhhhhh
Q psy15368 130 ADECFL 135 (522)
Q Consensus 130 ~~~~~~ 135 (522)
+|+...
T Consensus 83 ~Dll~~ 88 (349)
T 1u19_A 83 ADLFMV 88 (349)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 996654
No 26
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=79.97 E-value=20 Score=35.48 Aligned_cols=62 Identities=23% Similarity=0.251 Sum_probs=40.5
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhhccchhheehhhccchhhhhhhhh
Q psy15368 49 TGPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLIGIPFLMITIKMQTVTNMYIVNLA 128 (522)
Q Consensus 49 ~~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l~~p~~~~~~~~~~~~~~~~~~~~ 128 (522)
..+.......++.++..+++++|=+..++++.--.+.++ .+...|+|+.+|+
T Consensus 40 ~~~~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~----------------------------l~~~~~~~l~~La 91 (502)
T 3odu_A 40 REENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKK----------------------------LRSMTDKYRLHLS 91 (502)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC----------------------------SCCHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----------------------------CCCHHHHHHHHHH
Confidence 344455566666667777777777777777665433222 2456788999999
Q ss_pred hhhhhhhhcc
Q psy15368 129 IADECFLIGI 138 (522)
Q Consensus 129 ~~~~~~~~~~ 138 (522)
++|+.+++.+
T Consensus 92 ~~Dll~~~~~ 101 (502)
T 3odu_A 92 VADLLFVITL 101 (502)
T ss_dssp HHHHHHHTTH
T ss_pred HHHHHHHHHH
Confidence 9998775433
No 27
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=75.06 E-value=34 Score=33.28 Aligned_cols=58 Identities=31% Similarity=0.389 Sum_probs=32.4
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhhccchhheehhhccchhhhhhhhhh
Q psy15368 50 GPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLIGIPFLMITIKMQTVTNMYIVNLAI 129 (522)
Q Consensus 50 ~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l~~p~~~~~~~~~~~~~~~~~~~~~ 129 (522)
+........++.++..+++++|=+..++++..-.+.+ ..+...|+|+.+|++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~----------------------------~~~~~~~~~l~~La~ 61 (464)
T 4dkl_A 10 GSPSMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYT----------------------------KMKTATNIYIFNLAL 61 (464)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS----------------------------TTCSHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhcc----------------------------ccCCHHHHHHHHHHH
Confidence 3444444555555566666666666665554332211 234566889999999
Q ss_pred hhhhhh
Q psy15368 130 ADECFL 135 (522)
Q Consensus 130 ~~~~~~ 135 (522)
+|+...
T Consensus 62 ~Dll~~ 67 (464)
T 4dkl_A 62 ADALAT 67 (464)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 996544
No 28
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=72.56 E-value=5.9 Score=38.95 Aligned_cols=29 Identities=17% Similarity=0.064 Sum_probs=15.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHhhh
Q psy15368 53 LFFATQTIYLIICITGLLGNTLVIYVVLR 81 (522)
Q Consensus 53 ~~~~~~~i~~ii~~~giigN~lvi~vi~~ 81 (522)
......++.++..+++++|=+..++++..
T Consensus 30 ~~~~~~~~~i~~~ii~i~gi~gN~lvi~v 58 (448)
T 2z73_A 30 PDAVYYSLGIFIGICGIIGCGGNGIVIYL 58 (448)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHhhhh
Confidence 33344444455555666665555555543
No 29
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=56.28 E-value=19 Score=22.40 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=16.6
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccc
Q psy15368 45 CPHSTGPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSK 84 (522)
Q Consensus 45 ~~~~~~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~ 84 (522)
|+.+.+....+...++..++.++.+. +.++.++|+|+
T Consensus 3 Cp~~~s~~~~IA~gVVgGv~~~~ii~---~~~~~~~RRr~ 39 (44)
T 2ks1_B 3 CPTNGPKIPSIATGMVGALLLLLVVA---LGIGLFMRRRH 39 (44)
T ss_dssp CCCCCSCSSSSTHHHHHHHHHHHHHH---HHHHHHHHTTT
T ss_pred CCCCCCCcceEEeehhHHHHHHHHHH---HHHHHHhhhhH
Confidence 44333444445555555444444333 44444455444
No 30
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=41.47 E-value=25 Score=35.16 Aligned_cols=21 Identities=48% Similarity=0.588 Sum_probs=16.8
Q ss_pred hhccchhhhhhhhhhhhhhhh
Q psy15368 115 KMQTVTNMYIVNLAIADECFL 135 (522)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~ 135 (522)
..+...|.|+.+++++|+...
T Consensus 212 ~lr~~~~~ll~nLAiaDll~~ 232 (514)
T 3sn6_R 212 RLQTVTNYFITSLACADLVMG 232 (514)
T ss_dssp GGCCHHHHHHHHHHHHHHTTT
T ss_pred ccccHHHHHHHHHHHHHHHHH
Confidence 346778999999999996654
No 31
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=33.92 E-value=2.3e+02 Score=27.12 Aligned_cols=58 Identities=26% Similarity=0.253 Sum_probs=34.3
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccccccchhhHHHHHhhhhhhhhhccchhheehhhccchhhhhhhhhh
Q psy15368 50 GPTLFFATQTIYLIICITGLLGNTLVIYVVLRFSKMQTVTNMYIVNLAIADECFLIGIPFLMITIKMQTVTNMYIVNLAI 129 (522)
Q Consensus 50 ~~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~lr~~~~~~l~~LaiaDll~~l~~p~~~~~~~~~~~~~~~~~~~~~ 129 (522)
.+.......++.++..+++++|=+..++++..-.+.+ ..+...|.|+.+|++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~----------------------------~~~~~~~~~l~~La~ 67 (467)
T 3uon_A 16 SPYKTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNR----------------------------HLQTVNNYFLFSLAC 67 (467)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCG----------------------------GGCSHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHheeeeeecC----------------------------ccCchhHHHHHHHHH
Confidence 4555555556666666677777666666665432211 234567889999999
Q ss_pred hhhhhh
Q psy15368 130 ADECFL 135 (522)
Q Consensus 130 ~~~~~~ 135 (522)
+|+...
T Consensus 68 aDll~~ 73 (467)
T 3uon_A 68 ADLIIG 73 (467)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 996653
No 32
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=33.75 E-value=3.3e+02 Score=26.17 Aligned_cols=22 Identities=27% Similarity=0.424 Sum_probs=17.3
Q ss_pred hccchhhhhhhhhhhhhhhhhc
Q psy15368 116 MQTVTNMYIVNLAIADECFLIG 137 (522)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~ 137 (522)
.+...|+|+.+|+++|+...+.
T Consensus 51 l~~~~~~~l~~La~aDll~~~~ 72 (484)
T 3vw7_A 51 VKKPAVVYMLHLATADVLFVSV 72 (484)
T ss_dssp GCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHH
Confidence 3567789999999999776543
No 33
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=31.10 E-value=48 Score=33.08 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=14.3
Q ss_pred ccchhhhhhhhhhhhhhh
Q psy15368 117 QTVTNMYIVNLAIADECF 134 (522)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~ 134 (522)
+...|+|+.+||++|+.+
T Consensus 67 ~~~~n~~i~~La~aDll~ 84 (510)
T 4grv_A 67 QSTVHYHLGSLALSDLLI 84 (510)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHH
Confidence 355688999999999764
No 34
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=30.24 E-value=86 Score=18.35 Aligned_cols=24 Identities=21% Similarity=0.336 Sum_probs=18.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHH
Q psy15368 267 FILYTFILGFAIPLVLIFVFYYLV 290 (522)
Q Consensus 267 ~~~~~~~~~~~lp~~ii~~~y~~I 290 (522)
..+....++.++|.+..++.|++.
T Consensus 6 l~fiAt~Lfi~iPt~FLlilYvqT 29 (36)
T 3arc_M 6 LGLIATALFVLVPSVFLIILYVQT 29 (36)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhee
Confidence 445667777889999999999765
No 35
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=29.49 E-value=1e+02 Score=19.04 Aligned_cols=31 Identities=19% Similarity=0.076 Sum_probs=13.0
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHHHhhhccc
Q psy15368 51 PTLFFATQTIYLIICITGLLGNTLVIYVVLRFSK 84 (522)
Q Consensus 51 ~~~~~~~~~i~~ii~~~giigN~lvi~vi~~~~~ 84 (522)
....+...++-.++.++.+. +.++.++|+|+
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~---~~~~~~~RRRr 38 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVG---LTFAVYVRRKS 38 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHH---HHHHHHHHTTC
T ss_pred CcceEEEeehHHHHHHHHHH---HHHHHHhhhhh
Confidence 33344444444333333222 44444455444
No 36
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=28.03 E-value=28 Score=17.99 Aligned_cols=13 Identities=31% Similarity=0.442 Sum_probs=10.0
Q ss_pred hHHHHHHHHHccc
Q psy15368 407 DNFKKSFLKACTC 419 (522)
Q Consensus 407 ~~fR~~l~~~~~c 419 (522)
++||+.+++++..
T Consensus 4 krfrkkfkklfkk 16 (27)
T 2ket_A 4 KRFRKKFKKLFKK 16 (27)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 5788888888763
No 37
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=24.19 E-value=31 Score=20.39 Aligned_cols=15 Identities=20% Similarity=0.696 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHhc
Q psy15368 283 IFVFYYLVIRKLRTV 297 (522)
Q Consensus 283 i~~~y~~I~~~lr~~ 297 (522)
+.+.|..++|--+|+
T Consensus 13 ~~ifYFl~iRPQ~Kr 27 (37)
T 2rdd_B 13 GLIFYFMILRPQQKR 27 (37)
T ss_dssp HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHhhhHHHH
Confidence 356677777755553
Done!