BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15374
(205 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193683523|ref|XP_001944270.1| PREDICTED: DNA excision repair protein ERCC-1-like [Acyrthosiphon
pisum]
Length = 267
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/162 (60%), Positives = 124/162 (76%), Gaps = 5/162 (3%)
Query: 47 AAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRT 106
A N ++ SV S ++ S + +LVN +Q+GNPLLK I VPWEY D I+PDYVMGRT
Sbjct: 34 ATSNQPSTSSVNQSPVKSNASVSGVLVNNKQRGNPLLKSIVNVPWEYSDDILPDYVMGRT 93
Query: 107 TCALFLSIKYHALKPDYIADRIKALGKLYK-----LQVDSKDPHHALKYLTRVCLLCDLT 161
TCALFLS++YH LKPDYI +R+K+LGKLY+ LQ+D K+PH LK LTR+CL +LT
Sbjct: 94 TCALFLSLRYHMLKPDYIYNRVKSLGKLYELRVLLLQIDVKEPHAPLKQLTRMCLAAELT 153
Query: 162 LMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
LMLAW+ EEAG++IETYK+FENKPPDLIMEK + D +S+ N
Sbjct: 154 LMLAWTSEEAGKLIETYKIFENKPPDLIMEKAEADDYSRIAN 195
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 35/41 (85%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
MLAW+ EEAG++IETYK+FENKPPDLIMEK + D +S+ N
Sbjct: 155 MLAWTSEEAGKLIETYKIFENKPPDLIMEKAEADDYSRIAN 195
>gi|383848015|ref|XP_003699648.1| PREDICTED: DNA excision repair protein ERCC-1-like [Megachile
rotundata]
Length = 249
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/150 (62%), Positives = 117/150 (78%), Gaps = 6/150 (4%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PS+ S N +LVN +QKGNPLLK++ VPWEY + I+PDYVMG+T+CALFLSI+YH
Sbjct: 38 PSKIKNSSKFNTLLVNLKQKGNPLLKYVTNVPWEYSE-IVPDYVMGKTSCALFLSIRYHQ 96
Query: 119 LKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L PDYI +R+KALG +Y L QVD DPHHALK+LTRVC+L DLTLMLAW+ E+AG+
Sbjct: 97 LNPDYIHERLKALGNMYNLRVLLVQVDVADPHHALKHLTRVCILADLTLMLAWNAEDAGK 156
Query: 174 MIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
+IETYK++ENKPPD IME+ D P+ K N
Sbjct: 157 IIETYKIYENKPPDAIMERSDTAPYQKIVN 186
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
MLAW+ E+AG++IETYK++ENKPPD IME+ D P+ K N
Sbjct: 146 MLAWNAEDAGKIIETYKIYENKPPDAIMERSDTAPYQKIVN 186
>gi|328776660|ref|XP_623717.3| PREDICTED: DNA excision repair protein ERCC-1 [Apis mellifera]
Length = 255
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 117/150 (78%), Gaps = 6/150 (4%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PS+A S + +LV+ +QKGNPLLK I VPWEY + IIPDYVMG+TTCALFLSI+YH
Sbjct: 43 PSKAKDSLKFSTLLVSLKQKGNPLLKFINNVPWEYSE-IIPDYVMGKTTCALFLSIRYHQ 101
Query: 119 LKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L PDYI +R+K LG +Y L QVD +PHHALK+LTR+C+L DLTLMLAW+PE+AG+
Sbjct: 102 LNPDYIHERLKTLGNMYNLRVLLVQVDVPEPHHALKHLTRICILADLTLMLAWNPEDAGK 161
Query: 174 MIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
+IETYK++ENKPPD IM++ D P+ K N
Sbjct: 162 IIETYKIYENKPPDAIMDRSDTAPYQKLVN 191
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 34/41 (82%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
MLAW+PE+AG++IETYK++ENKPPD IM++ D P+ K N
Sbjct: 151 MLAWNPEDAGKIIETYKIYENKPPDAIMDRSDTAPYQKLVN 191
>gi|340726144|ref|XP_003401422.1| PREDICTED: DNA excision repair protein ERCC-1-like [Bombus
terrestris]
Length = 254
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/150 (60%), Positives = 117/150 (78%), Gaps = 6/150 (4%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PS+ ++ N +LV+ +QKGNPLLK I VPWE+ + I+PDYVMG+TTCALFLSI+YH
Sbjct: 42 PSKVTSASKFNTLLVSLKQKGNPLLKFINNVPWEFSE-IVPDYVMGKTTCALFLSIRYHQ 100
Query: 119 LKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L PDYI +R+KALG +Y L QVD +P+HALK+LTR+C+L DLTLMLAW+ E+AG+
Sbjct: 101 LNPDYIHERLKALGNMYNLRVLLVQVDVAEPNHALKHLTRICILADLTLMLAWNAEDAGK 160
Query: 174 MIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
+IETYK++ENKPPD IME+ D P+ K N
Sbjct: 161 IIETYKIYENKPPDAIMERSDTAPYQKLMN 190
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
MLAW+ E+AG++IETYK++ENKPPD IME+ D P+ K N
Sbjct: 150 MLAWNAEDAGKIIETYKIYENKPPDAIMERSDTAPYQKLMN 190
>gi|350405231|ref|XP_003487367.1| PREDICTED: DNA excision repair protein ERCC-1-like [Bombus
impatiens]
Length = 254
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/150 (60%), Positives = 117/150 (78%), Gaps = 6/150 (4%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PS+ ++ + +LV+ +QKGNPLLK I VPWE+ + I+PDYVMG+TTCALFLSI+YH
Sbjct: 42 PSKVTSASKFSTLLVSLKQKGNPLLKFITNVPWEFSE-IVPDYVMGKTTCALFLSIRYHQ 100
Query: 119 LKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L PDYI +R+KALG +Y L QVD +PHHALK+LTR+C+L DLTLMLAW+ E+AG+
Sbjct: 101 LNPDYIHERLKALGNMYNLRVLLVQVDVAEPHHALKHLTRICILADLTLMLAWNAEDAGK 160
Query: 174 MIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
+IETYK++ENKPPD IME+ D P+ K N
Sbjct: 161 IIETYKIYENKPPDAIMERSDTAPYQKLMN 190
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
MLAW+ E+AG++IETYK++ENKPPD IME+ D P+ K N
Sbjct: 150 MLAWNAEDAGKIIETYKIYENKPPDAIMERSDTAPYQKLMN 190
>gi|156551812|ref|XP_001603974.1| PREDICTED: DNA excision repair protein ERCC-1-like [Nasonia
vitripennis]
Length = 261
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
N +L+NP+Q+GNPLLKHI VP+EY + IIPDYV+G+T+C LFLS++YH L PDYI +R+
Sbjct: 59 NPLLINPKQRGNPLLKHITSVPYEYSE-IIPDYVVGKTSCILFLSLRYHQLNPDYIHERL 117
Query: 129 KALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
K LG Y L QVD +PHH+LK+LTR+C+L DLTLMLAWS EEAG++IETYK +EN
Sbjct: 118 KTLGSSYNLRVLLVQVDVAEPHHSLKHLTRICILADLTLMLAWSAEEAGKIIETYKAYEN 177
Query: 184 KPPDLIMEKQDVDPHSKTWN 203
KPPD+IME+ D PH K N
Sbjct: 178 KPPDMIMERSDTAPHQKLIN 197
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 33/41 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
MLAWS EEAG++IETYK +ENKPPD+IME+ D PH K N
Sbjct: 157 MLAWSAEEAGKIIETYKAYENKPPDMIMERSDTAPHQKLIN 197
>gi|189241644|ref|XP_970360.2| PREDICTED: similar to excision repair cross-complementing 1 ercc1
[Tribolium castaneum]
Length = 245
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 119/159 (74%), Gaps = 6/159 (3%)
Query: 47 AAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRT 106
A N SE P + ++ ++++LV+P+Q+GNPLLK I VPWEYDD I+PDY MGRT
Sbjct: 26 APHNRDNSEGETPQTSKSAARTHSVLVSPKQRGNPLLKSICNVPWEYDD-IVPDYQMGRT 84
Query: 107 TCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLT 161
TCALFLS++YH L PDYI +R+K LGK Y+L QVD DPHH LK LTRVC+L DLT
Sbjct: 85 TCALFLSLRYHNLNPDYIHERLKKLGKTYELRILLVQVDVSDPHHLLKNLTRVCILADLT 144
Query: 162 LMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
L+LAWS EEAG++IETYK++ENKP D IMEK + P+ +
Sbjct: 145 LILAWSAEEAGKIIETYKIYENKPADNIMEKGESSPYIR 183
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+LAWS EEAG++IETYK++ENKP D IMEK + P+ +
Sbjct: 146 ILAWSAEEAGKIIETYKIYENKPADNIMEKGESSPYIR 183
>gi|125807281|ref|XP_001360338.1| GA10163 [Drosophila pseudoobscura pseudoobscura]
gi|54635510|gb|EAL24913.1| GA10163 [Drosophila pseudoobscura pseudoobscura]
Length = 260
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 127/174 (72%), Gaps = 8/174 (4%)
Query: 35 PHSKTWNFDPVPAAQ---NSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPW 91
P ++ PVPAA NS+ + S + A + + +++LV+ +Q+GNP+LK I VP
Sbjct: 25 PKVQSSTIQPVPAATSTANSSNNTSASITVAKPASNPHSVLVHSKQRGNPILKSIQNVPL 84
Query: 92 EYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHH 146
E+ D I+PDYV+GRT+C LFLS+KYH L PDYI R+KALGK+Y+L QVD+ +PH+
Sbjct: 85 EFRDDIVPDYVVGRTSCILFLSLKYHNLNPDYICQRLKALGKMYELRVLLVQVDTPEPHN 144
Query: 147 ALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
ALK LTR+ LL DLT+MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K
Sbjct: 145 ALKSLTRISLLADLTMMLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQK 198
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K
Sbjct: 161 MLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQK 198
>gi|380024818|ref|XP_003696187.1| PREDICTED: DNA excision repair protein ERCC-1-like [Apis florea]
Length = 254
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/150 (60%), Positives = 115/150 (76%), Gaps = 6/150 (4%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PS+ S + +LV+ +QKGNPLLK I VPWEY + I+PDYVMG+TTCALFLSI+YH
Sbjct: 42 PSKVKDSSKFSTLLVSLKQKGNPLLKFISNVPWEYSE-IVPDYVMGKTTCALFLSIRYHQ 100
Query: 119 LKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L PDYI +R+K LG +Y L QVD +PHHALK+LTR+C+L DLTLMLAW+ E+AG+
Sbjct: 101 LNPDYIHERLKTLGNMYNLRVLLVQVDVPEPHHALKHLTRICILADLTLMLAWNAEDAGK 160
Query: 174 MIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
+IETYK++ENKPPD IM++ D P+ K N
Sbjct: 161 IIETYKIYENKPPDAIMDRSDTAPYQKLVN 190
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 33/41 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
MLAW+ E+AG++IETYK++ENKPPD IM++ D P+ K N
Sbjct: 150 MLAWNAEDAGKIIETYKIYENKPPDAIMDRSDTAPYQKLVN 190
>gi|195149698|ref|XP_002015793.1| GL11250 [Drosophila persimilis]
gi|194109640|gb|EDW31683.1| GL11250 [Drosophila persimilis]
Length = 260
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 126/174 (72%), Gaps = 8/174 (4%)
Query: 35 PHSKTWNFDPVPAAQ---NSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPW 91
P + PVPAA NS+ + S + A + + +++LV+ +Q+GNP+LK I VP
Sbjct: 25 PKVQPSTIQPVPAATSTANSSNNTSASITVAKPASNPHSVLVHSKQRGNPILKSIQNVPL 84
Query: 92 EYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHH 146
E+ D I+PDYV+GRT+C LFLS+KYH L PDYI R+KALGK+Y+L QVD+ +PH+
Sbjct: 85 EFRDDIVPDYVVGRTSCILFLSLKYHNLNPDYICQRLKALGKMYELRVLLVQVDTPEPHN 144
Query: 147 ALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
ALK LTR+ LL DLT+MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K
Sbjct: 145 ALKSLTRISLLADLTMMLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQK 198
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K
Sbjct: 161 MLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQK 198
>gi|157117886|ref|XP_001653084.1| excision repair cross-complementing 1 ercc1 [Aedes aegypti]
gi|108875925|gb|EAT40150.1| AAEL008081-PA [Aedes aegypti]
Length = 249
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 126/169 (74%), Gaps = 13/169 (7%)
Query: 44 PVPAAQNSATSESVQPSRAGASKS-------SNAILVNPRQKGNPLLKHIGKVPWEYDDS 96
P P + S SE+ + + + ++ + N +LVNP+Q+GNPLLK I +PWEYDD
Sbjct: 20 PSPPKKASLVSETSEATGSTSTATVVRSVNKGNCVLVNPKQRGNPLLKSIQNIPWEYDD- 78
Query: 97 IIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYL 151
I+PDYV+G T+C L++S++YH L PDYI R+K LGK+Y+L QVD ++PH+ALK+L
Sbjct: 79 IVPDYVVGATSCILYISLRYHNLNPDYIHGRLKQLGKMYELRVLLVQVDIQEPHNALKHL 138
Query: 152 TRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
TR+CLL DLTLMLAW+ EEAG+++ETYK+FENKPPDLIME+ + P+ K
Sbjct: 139 TRICLLADLTLMLAWNAEEAGKIVETYKMFENKPPDLIMERAEQYPYQK 187
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
MLAW+ EEAG+++ETYK+FENKPPDLIME+ + P+ K
Sbjct: 150 MLAWNAEEAGKIVETYKMFENKPPDLIMERAEQYPYQK 187
>gi|157136934|ref|XP_001663869.1| excision repair cross-complementing 1 ercc1 [Aedes aegypti]
gi|108869820|gb|EAT34045.1| AAEL013693-PA [Aedes aegypti]
Length = 249
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 118/154 (76%), Gaps = 6/154 (3%)
Query: 52 ATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALF 111
AT + + + N +LVNP+Q+GNPLLK I +PWEYDD I+PDYV+G T+C L+
Sbjct: 35 ATGSTSTATVVRSVNKGNCVLVNPKQRGNPLLKSIQNIPWEYDD-IVPDYVVGATSCILY 93
Query: 112 LSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAW 166
+S++YH L PDYI R+K LGK+Y+L QVD ++PH+ALK+LTR+CLL DLTLMLAW
Sbjct: 94 ISLRYHNLNPDYIHGRLKQLGKMYELRVLLVQVDIQEPHNALKHLTRICLLADLTLMLAW 153
Query: 167 SPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
+ EEAG+++ETYK+FENKPPDLIME+ + P+ K
Sbjct: 154 NAEEAGKIVETYKMFENKPPDLIMERAEQYPYQK 187
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
MLAW+ EEAG+++ETYK+FENKPPDLIME+ + P+ K
Sbjct: 150 MLAWNAEEAGKIVETYKMFENKPPDLIMERAEQYPYQK 187
>gi|307175305|gb|EFN65335.1| DNA excision repair protein ERCC-1 [Camponotus floridanus]
Length = 256
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/151 (59%), Positives = 112/151 (74%), Gaps = 6/151 (3%)
Query: 58 QPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYH 117
+ S A S SN +LVNP+QKGNPLLK I V WEY D I+PDY+MG+TTCALFLSI+YH
Sbjct: 47 ETSTAIISHISNVVLVNPKQKGNPLLKFITNVSWEYSD-IVPDYIMGKTTCALFLSIRYH 105
Query: 118 ALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAG 172
L PDYI +R+K LG Y L Q+D DPHHALK+LTR+ +L D+T+MLAWS E+AG
Sbjct: 106 QLNPDYIHERLKLLGNAYNLRVLLVQIDVADPHHALKHLTRISILADMTIMLAWSAEDAG 165
Query: 173 EMIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
++IETYK +E KPPD IME+ + P+ K N
Sbjct: 166 KIIETYKRYETKPPDDIMERSNTAPYQKLVN 196
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
MLAWS E+AG++IETYK +E KPPD IME+ + P+ K N
Sbjct: 156 MLAWSAEDAGKIIETYKRYETKPPDDIMERSNTAPYQKLVN 196
>gi|332024090|gb|EGI64307.1| DNA excision repair protein ERCC-1 [Acromyrmex echinatior]
Length = 262
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/151 (58%), Positives = 115/151 (76%), Gaps = 6/151 (3%)
Query: 58 QPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYH 117
+ S A +S ++ +LV+P+QKGNPLLK I V WEY D I+PDYVMG+TTCALFLSI+YH
Sbjct: 47 ETSTAISSSRTSTVLVSPKQKGNPLLKFITNVLWEYSD-IVPDYVMGKTTCALFLSIRYH 105
Query: 118 ALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAG 172
L PDYI +R+K LG Y L Q+D +PHHALK+LTR+ +L DLT+MLAW+ E+AG
Sbjct: 106 QLNPDYIHERLKLLGNAYNLRVLLVQIDVPEPHHALKHLTRISILADLTIMLAWNAEDAG 165
Query: 173 EMIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
++IETYK++ENKPPD IME+ + P+ K N
Sbjct: 166 KIIETYKIYENKPPDNIMERSETAPYQKLVN 196
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 33/41 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
MLAW+ E+AG++IETYK++ENKPPD IME+ + P+ K N
Sbjct: 156 MLAWNAEDAGKIIETYKIYENKPPDNIMERSETAPYQKLVN 196
>gi|194754132|ref|XP_001959351.1| GF12823 [Drosophila ananassae]
gi|190620649|gb|EDV36173.1| GF12823 [Drosophila ananassae]
Length = 236
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 119/161 (73%), Gaps = 7/161 (4%)
Query: 47 AAQNSATSESVQPSRAGASKSSN--AILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMG 104
+A +AT + + A A SSN ++LV+ +Q+GNP+LK I VP EY D I+PDYV+G
Sbjct: 14 SAGMAATPSTSNSTVATAKPSSNPHSVLVHSKQRGNPILKSIQNVPLEYRDDIVPDYVVG 73
Query: 105 RTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCD 159
RT+C L+LS+KYH L PDYI R+K LGK+Y L QVD+ +PH+ALK LTR+ LL D
Sbjct: 74 RTSCVLYLSLKYHNLNPDYICQRLKTLGKMYDLRVLLVQVDTPEPHNALKSLTRISLLAD 133
Query: 160 LTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
LT+MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K
Sbjct: 134 LTMMLAWNHEEAGKIIETYKQFEKRPPDLIMERVESNPHQK 174
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK----TWNFDPV 45
MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K N PV
Sbjct: 137 MLAWNHEEAGKIIETYKQFEKRPPDLIMERVESNPHQKLVTALTNIKPV 185
>gi|195583504|ref|XP_002081557.1| GD11080 [Drosophila simulans]
gi|194193566|gb|EDX07142.1| GD11080 [Drosophila simulans]
Length = 259
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 122/168 (72%), Gaps = 11/168 (6%)
Query: 44 PVPAAQNSATSESVQPSRAGA------SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSI 97
P A N A S S +PS +G + + + +LV+ +Q+GNP+LK I VP E+ D I
Sbjct: 30 PAATAVNPAPSNSTEPSGSGRPAPGKPASNPHCVLVHSKQRGNPILKSILNVPLEFRDDI 89
Query: 98 IPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLT 152
+PDYV+GRT+C L+LS+KYH L PDYI R+KALGK+Y+L QVD+ +P++ALK LT
Sbjct: 90 VPDYVVGRTSCVLYLSLKYHNLNPDYICQRLKALGKMYELRVLLVQVDTPEPNNALKSLT 149
Query: 153 RVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
R+ LL DLT+MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K
Sbjct: 150 RISLLADLTMMLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQK 197
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTW----NFDPV 45
MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K N PV
Sbjct: 160 MLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQKLLAALTNIKPV 208
>gi|17137732|ref|NP_477468.1| Ercc1 [Drosophila melanogaster]
gi|5020078|gb|AAD38010.1|AF146797_1 nucleotide excision repair protein ERCC1 [Drosophila melanogaster]
gi|7303131|gb|AAF58196.1| Ercc1 [Drosophila melanogaster]
Length = 259
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 122/168 (72%), Gaps = 11/168 (6%)
Query: 44 PVPAAQNSATSESVQPSRAGA------SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSI 97
P A N A S S +PS +G + + + +LV+ +Q+GNP+LK I VP E+ D I
Sbjct: 30 PAATAVNPAPSNSTEPSGSGRPAPGKPASNPHCVLVHSKQRGNPILKSILNVPLEFRDDI 89
Query: 98 IPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLT 152
+PDYV+GRT+C L+LS+KYH L PDYI R+KALGK+Y+L QVD+ +P++ALK LT
Sbjct: 90 VPDYVVGRTSCVLYLSLKYHNLNPDYICQRLKALGKMYELRVLLVQVDTPEPNNALKSLT 149
Query: 153 RVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
R+ LL DLT+MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K
Sbjct: 150 RISLLADLTMMLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQK 197
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTW----NFDPV 45
MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K N PV
Sbjct: 160 MLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQKLLAALTNIKPV 208
>gi|332373636|gb|AEE61959.1| unknown [Dendroctonus ponderosae]
Length = 241
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 116/155 (74%), Gaps = 6/155 (3%)
Query: 52 ATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALF 111
++ E +P+ + S+ ++LVNP+Q+GNP+LK I +V WEYDD I+PDY MG CALF
Sbjct: 28 SSKEPSKPASTVLATSTKSLLVNPKQRGNPILKSILRVAWEYDD-IVPDYQMGSQICALF 86
Query: 112 LSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAW 166
LS++YH L PDYI DR+K L Y+L QVD KDPH+ALK LTR+C+L ++TL+LAW
Sbjct: 87 LSLRYHNLNPDYIHDRLKLLKDSYRLRILLVQVDVKDPHYALKNLTRICILANMTLILAW 146
Query: 167 SPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKT 201
SPEEAG+++ETYK+FENKPPD +M K + P+ K
Sbjct: 147 SPEEAGKIVETYKIFENKPPDNVMGKTEASPYLKV 181
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKT 39
+LAWSPEEAG+++ETYK+FENKPPD +M K + P+ K
Sbjct: 143 ILAWSPEEAGKIVETYKIFENKPPDNVMGKTEASPYLKV 181
>gi|195436244|ref|XP_002066079.1| GK22170 [Drosophila willistoni]
gi|194162164|gb|EDW77065.1| GK22170 [Drosophila willistoni]
Length = 259
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 116/159 (72%), Gaps = 6/159 (3%)
Query: 47 AAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRT 106
+A S ++ S P AS N +LV+ +Q+GNP+LK I VP EY D I+PDYV+GRT
Sbjct: 40 SASTSGSAVSAAPVSKPASNPHN-VLVHTKQRGNPILKFILNVPLEYRDDIVPDYVVGRT 98
Query: 107 TCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLT 161
+C L+LS+KYH L PDYI R+KALGK Y+L QVD+ +PH+ALK LTR+ LL DLT
Sbjct: 99 SCILYLSLKYHNLNPDYICQRLKALGKSYELRVLLVQVDTPEPHNALKSLTRISLLADLT 158
Query: 162 LMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
+MLAW+ EEAG+MIETYK FE + PDLIME+ + +PH K
Sbjct: 159 MMLAWNAEEAGKMIETYKQFEKRSPDLIMERVESNPHQK 197
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
MLAW+ EEAG+MIETYK FE + PDLIME+ + +PH K
Sbjct: 160 MLAWNAEEAGKMIETYKQFEKRSPDLIMERVESNPHQK 197
>gi|195056714|ref|XP_001995148.1| GH22789 [Drosophila grimshawi]
gi|193899354|gb|EDV98220.1| GH22789 [Drosophila grimshawi]
Length = 254
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/136 (62%), Positives = 109/136 (80%), Gaps = 5/136 (3%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIK 129
++LV+ +Q+GNP+LK I VP E+ D IIPDYV+GRT+C LFLS+KYH L PDYI R+K
Sbjct: 57 SVLVHSKQRGNPILKSILNVPLEFRDDIIPDYVVGRTSCILFLSLKYHNLNPDYICQRLK 116
Query: 130 ALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
ALGKLY+L QVD+ +PH+ALK LTR+ LL DLT+MLAW+ EEAG++IETYK FE +
Sbjct: 117 ALGKLYELRVLLVQVDTPEPHNALKSLTRISLLADLTMMLAWNAEEAGKIIETYKQFEKR 176
Query: 185 PPDLIMEKQDVDPHSK 200
PPDLIME+ + +PH K
Sbjct: 177 PPDLIMERVESNPHQK 192
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK----TWNFDPV 45
MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K N PV
Sbjct: 155 MLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQKLVAALTNIKPV 203
>gi|16768600|gb|AAL28519.1| GM10122p [Drosophila melanogaster]
Length = 244
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 122/168 (72%), Gaps = 11/168 (6%)
Query: 44 PVPAAQNSATSESVQPSRAGA------SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSI 97
P A + A S S +PS +G + + + +LV+ +Q+GNP+LK I VP E+ D I
Sbjct: 15 PSATAVHPAPSNSTEPSGSGRPAPGKPASNPHCVLVHSKQRGNPILKSILNVPLEFRDDI 74
Query: 98 IPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLT 152
+PDYV+GRT+C L+LS+KYH L PDYI R+KALGK+Y+L QVD+ +P++ALK LT
Sbjct: 75 VPDYVVGRTSCVLYLSLKYHNLNPDYICQRLKALGKMYELRVLLVQVDTPEPNNALKSLT 134
Query: 153 RVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
R+ LL DLT+MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K
Sbjct: 135 RISLLADLTMMLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQK 182
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTW----NFDPV 45
MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K N PV
Sbjct: 145 MLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQKLLAALTNIKPV 193
>gi|270000835|gb|EEZ97282.1| hypothetical protein TcasGA2_TC011086 [Tribolium castaneum]
Length = 213
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 111/147 (75%), Gaps = 9/147 (6%)
Query: 54 SESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLS 113
SE P + ++ ++++LV+P+Q+GNPLLK I VPWEYDD I+PDY MGRTTCALFLS
Sbjct: 14 SEGETPQTSKSAARTHSVLVSPKQRGNPLLKSICNVPWEYDD-IVPDYQMGRTTCALFLS 72
Query: 114 IKYHALKPDYIADRIKALGKLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
++YH L PDYI +R+K LGK DPHH LK LTRVC+L DLTL+LAWS EEAG+
Sbjct: 73 LRYHNLNPDYIHERLKKLGK--------TDPHHLLKNLTRVCILADLTLILAWSAEEAGK 124
Query: 174 MIETYKVFENKPPDLIMEKQDVDPHSK 200
+IETYK++ENKP D IMEK + P+ +
Sbjct: 125 IIETYKIYENKPADNIMEKGESSPYIR 151
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+LAWS EEAG++IETYK++ENKP D IMEK + P+ +
Sbjct: 114 ILAWSAEEAGKIIETYKIYENKPADNIMEKGESSPYIR 151
>gi|195334481|ref|XP_002033906.1| GM21575 [Drosophila sechellia]
gi|194125876|gb|EDW47919.1| GM21575 [Drosophila sechellia]
Length = 259
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 121/168 (72%), Gaps = 11/168 (6%)
Query: 44 PVPAAQNSATSESVQPS---RAGASK---SSNAILVNPRQKGNPLLKHIGKVPWEYDDSI 97
P A N A S S +PS R K + + +LV+ +Q+GNP+LK I VP E+ D I
Sbjct: 30 PAATAVNPAPSTSTEPSGSDRPAPGKPPSNPHCVLVHSKQRGNPILKSILNVPLEFRDDI 89
Query: 98 IPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLT 152
+PDYV+GRT+C L+LS+KYH L PDYI R+KALGK+Y+L QVD+ +P++ALK LT
Sbjct: 90 VPDYVVGRTSCVLYLSLKYHNLNPDYICQRLKALGKMYELRVLLVQVDTPEPNNALKSLT 149
Query: 153 RVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
R+ LL DLT+MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K
Sbjct: 150 RISLLADLTMMLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQK 197
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTW----NFDPV 45
MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K N PV
Sbjct: 160 MLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQKLLAALTNIKPV 208
>gi|115717719|ref|XP_791729.2| PREDICTED: DNA excision repair protein ERCC-1-like
[Strongylocentrotus purpuratus]
Length = 471
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 116/164 (70%), Gaps = 8/164 (4%)
Query: 44 PVPAAQNSATSESVQPSRAGASK--SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDY 101
P A + S + +V + AG +K S N+++VNPRQ+GNP+LKH+ VPWE+ D I+PDY
Sbjct: 231 PQAAVKQSTSDSAVPGTSAGLNKAPSGNSVIVNPRQRGNPILKHVRNVPWEFGD-IVPDY 289
Query: 102 VMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCL 156
VMGRTTCA +LS++YH L P+YI+DR+ LG + L QVD KDPHH++K L R+ +
Sbjct: 290 VMGRTTCAFYLSLRYHNLNPNYISDRLTELGHKFDLRVLLVQVDVKDPHHSVKELARLAI 349
Query: 157 LCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
L D TLMLAW+ EEAG IETYK +ENKP D + EK + + SK
Sbjct: 350 LSDCTLMLAWNAEEAGRYIETYKAYENKPVDALKEKVEQNHLSK 393
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
MLAW+ EEAG IETYK +ENKP D + EK + + SK
Sbjct: 356 MLAWNAEEAGRYIETYKAYENKPVDALKEKVEQNHLSK 393
>gi|195381327|ref|XP_002049404.1| GJ20764 [Drosophila virilis]
gi|194144201|gb|EDW60597.1| GJ20764 [Drosophila virilis]
Length = 256
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 110/137 (80%), Gaps = 5/137 (3%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
+++LV+ +Q+GNP+LK I VP E+ D IIPDYV+GRT+C LFLS+KYH L PDYI R+
Sbjct: 58 HSVLVHSKQRGNPILKSILNVPLEFRDDIIPDYVVGRTSCILFLSLKYHNLNPDYICQRL 117
Query: 129 KALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
KALGK+Y+L QVD+ +PH+ALK LTR+ LL DLT+MLAW+ EEAG++IETYK FE
Sbjct: 118 KALGKMYELRVLLVQVDTPEPHNALKSLTRISLLADLTMMLAWNAEEAGKIIETYKQFEK 177
Query: 184 KPPDLIMEKQDVDPHSK 200
+PPDLIME+ + +PH K
Sbjct: 178 RPPDLIMERVESNPHQK 194
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K
Sbjct: 157 MLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQK 194
>gi|312382589|gb|EFR27996.1| hypothetical protein AND_04684 [Anopheles darlingi]
Length = 245
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 110/147 (74%), Gaps = 6/147 (4%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
P SN ILVNP+Q+GNPLLK I +PWEYD+ ++PDYV+G + C LFLS++YH
Sbjct: 39 PVVIAKVNKSNCILVNPKQRGNPLLKAIQNIPWEYDE-VVPDYVVGASACILFLSLRYHN 97
Query: 119 LKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L PDYI R+K LGK+Y+L Q+D ++P +ALK+LTR+CLL DLTLMLAW+ +EAG
Sbjct: 98 LNPDYIHARLKQLGKMYELRVLLVQIDIQEPQNALKHLTRICLLADLTLMLAWNADEAGR 157
Query: 174 MIETYKVFENKPPDLIMEKQDVDPHSK 200
++E YK+FEN+PPD IME+ + PH K
Sbjct: 158 IVEKYKLFENRPPDWIMERAEKYPHEK 184
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
MLAW+ +EAG ++E YK+FEN+PPD IME+ + PH K
Sbjct: 147 MLAWNADEAGRIVEKYKLFENRPPDWIMERAEKYPHEK 184
>gi|357616346|gb|EHJ70143.1| excision repair cross-complementing 1 ercc1 [Danaus plexippus]
Length = 269
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 109/145 (75%), Gaps = 6/145 (4%)
Query: 64 ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDY 123
+ ++ +LVN +Q+GNPLLK I VPWEYD+ I+PDY +G+T LFLS++YH L PDY
Sbjct: 38 TATKTHCVLVNQKQRGNPLLKFITSVPWEYDE-IVPDYEIGKTIGILFLSLRYHNLNPDY 96
Query: 124 IADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETY 178
I +R+K LGK Y L QVD KDPH ALK LTR+CLL D+TLMLAWSPEE+ ++IE Y
Sbjct: 97 INNRLKELGKKYDLRVLLVQVDLKDPHVALKNLTRICLLTDMTLMLAWSPEESAKIIENY 156
Query: 179 KVFENKPPDLIMEKQDVDPHSKTWN 203
K++ENKPPD IMEK + DPH K N
Sbjct: 157 KIYENKPPDRIMEKIENDPHQKIIN 181
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
MLAWSPEE+ ++IE YK++ENKPPD IMEK + DPH K N
Sbjct: 141 MLAWSPEESAKIIENYKIYENKPPDRIMEKIENDPHQKIIN 181
>gi|347971102|ref|XP_318485.4| AGAP004029-PA [Anopheles gambiae str. PEST]
gi|333469632|gb|EAA13582.4| AGAP004029-PA [Anopheles gambiae str. PEST]
Length = 270
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 119/181 (65%), Gaps = 23/181 (12%)
Query: 42 FDPVPAAQNSATSESVQPSR-----------------AGASKSSNAILVNPRQKGNPLLK 84
D P A+ A SE+ PS A S+ ILVNP+Q+GNPLLK
Sbjct: 11 LDIPPPAKQMAVSETSAPSNTTTATTAETPTTAPVVVAAKVNKSHCILVNPKQRGNPLLK 70
Query: 85 HIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QV 139
I +PWEYDD ++PDYV+G + C LFLS++YH L PDYI R+K LGK+Y+L Q+
Sbjct: 71 AIQTIPWEYDD-VVPDYVVGASACILFLSLRYHNLNPDYIHARLKQLGKMYELRVLLVQI 129
Query: 140 DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHS 199
D +P +ALK+LTR+CLL DLTLMLAW+ +EAG ++E YK+FEN+PPD IME+ + PH
Sbjct: 130 DISEPQNALKHLTRICLLADLTLMLAWNADEAGRIVEKYKLFENRPPDWIMERAEKYPHE 189
Query: 200 K 200
K
Sbjct: 190 K 190
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
MLAW+ +EAG ++E YK+FEN+PPD IME+ + PH K
Sbjct: 153 MLAWNADEAGRIVEKYKLFENRPPDWIMERAEKYPHEK 190
>gi|195122302|ref|XP_002005651.1| GI20584 [Drosophila mojavensis]
gi|193910719|gb|EDW09586.1| GI20584 [Drosophila mojavensis]
Length = 254
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 108/137 (78%), Gaps = 5/137 (3%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
+++LV+ +Q+GNP+LK I VP EY D IIPDYV+GRT C LFLS+KYH L PDYI R+
Sbjct: 56 HSVLVHTKQRGNPILKSILNVPLEYRDDIIPDYVVGRTACILFLSLKYHNLNPDYICQRL 115
Query: 129 KALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
KALGKLY+L QVD+ +PH+ALK LTR+ LL DLT+MLAW+ +EAG++IETYK FE
Sbjct: 116 KALGKLYELRVLLVQVDTPEPHNALKSLTRISLLADLTMMLAWNADEAGKIIETYKQFEK 175
Query: 184 KPPDLIMEKQDVDPHSK 200
+ PDLIME+ + +PH K
Sbjct: 176 RSPDLIMERVESNPHQK 192
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK----TWNFDPV 45
MLAW+ +EAG++IETYK FE + PDLIME+ + +PH K N PV
Sbjct: 155 MLAWNADEAGKIIETYKQFEKRSPDLIMERVESNPHQKLVAALTNIKPV 203
>gi|195486112|ref|XP_002091366.1| GE13614 [Drosophila yakuba]
gi|194177467|gb|EDW91078.1| GE13614 [Drosophila yakuba]
Length = 259
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 109/137 (79%), Gaps = 5/137 (3%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
+ +LV+ +Q+GNP+LK I VP E+ D I+PDYV+GRT+C L+LS+KYH L PDYI R+
Sbjct: 61 HCVLVHSKQRGNPILKSILNVPLEFRDDIVPDYVVGRTSCILYLSLKYHNLNPDYICQRL 120
Query: 129 KALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
KALGK+Y+L QVD+ +P++ALK LTR+ LL DLT+MLAW+ EEAG++IETYK FE
Sbjct: 121 KALGKMYELRVLLVQVDTPEPNNALKSLTRISLLADLTMMLAWNAEEAGKIIETYKQFEK 180
Query: 184 KPPDLIMEKQDVDPHSK 200
+PPDLIME+ + +PH K
Sbjct: 181 RPPDLIMERVESNPHQK 197
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTW----NFDPV 45
MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K N PV
Sbjct: 160 MLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQKLLAALTNIKPV 208
>gi|242003235|ref|XP_002422661.1| DNA excision repair protein ERCC-1, putative [Pediculus humanus
corporis]
gi|212505472|gb|EEB09923.1| DNA excision repair protein ERCC-1, putative [Pediculus humanus
corporis]
Length = 260
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 110/142 (77%), Gaps = 10/142 (7%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S NAIL +GNPLLK+I VPWE+DD ++ DYVMG+TTCAL+LS++YH L PDYI D
Sbjct: 27 SGNAIL-----RGNPLLKYITHVPWEFDDRMLADYVMGQTTCALYLSVRYHNLNPDYIHD 81
Query: 127 RIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
R+K LGK Y L+ VD KDPHHA+K LTR+ +L +LT+ML S EEAG++IE YK++
Sbjct: 82 RLKILGKNYLLRVLLVMVDIKDPHHAIKTLTRISILANLTIMLCRSSEEAGKIIERYKIY 141
Query: 182 ENKPPDLIMEKQDVDPHSKTWN 203
+NKPPDLIMEK++ DP+S+ +
Sbjct: 142 QNKPPDLIMEKKEADPYSRIMS 163
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 34/41 (82%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
ML S EEAG++IE YK+++NKPPDLIMEK++ DP+S+ +
Sbjct: 123 MLCRSSEEAGKIIERYKIYQNKPPDLIMEKKEADPYSRIMS 163
>gi|322799807|gb|EFZ20999.1| hypothetical protein SINV_01434 [Solenopsis invicta]
Length = 189
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 102/132 (77%), Gaps = 6/132 (4%)
Query: 77 QKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYK 136
Q+GNPLLK I V WEY D I+PDYVMG+TTCALFLSI+YH L PDYI +R+K LG +Y
Sbjct: 1 QRGNPLLKFITNVSWEYSD-IVPDYVMGKTTCALFLSIRYHQLNPDYIHERLKLLGNVYN 59
Query: 137 L-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIME 191
L Q+D DPHHALK+LTR+ +L D+TLMLAW+ E+AG++IETYK++E+KP D IME
Sbjct: 60 LRVLLVQIDVADPHHALKHLTRISILADMTLMLAWNAEDAGKIIETYKMYESKPSDDIME 119
Query: 192 KQDVDPHSKTWN 203
+ D PH K N
Sbjct: 120 RSDTAPHQKLVN 131
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
MLAW+ E+AG++IETYK++E+KP D IME+ D PH K N
Sbjct: 91 MLAWNAEDAGKIIETYKMYESKPSDDIMERSDTAPHQKLVN 131
>gi|156230822|gb|AAI51884.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 1 [Danio rerio]
Length = 342
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 103/131 (78%), Gaps = 6/131 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S N+I+V+PRQ+GNP+LK + VPWE+ + ++PDYV+GRTTCALFLS++YH L P+Y+ +
Sbjct: 138 SGNSIIVSPRQRGNPILKFVRNVPWEFGE-VVPDYVLGRTTCALFLSVRYHNLNPNYVHE 196
Query: 127 RIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
R+K LG+ + L QVD KDPHHALK L R+C++ D TL+LAWSPEEAG +ETYK +
Sbjct: 197 RLKQLGQSFSLRILLVQVDVKDPHHALKELARICIMADCTLILAWSPEEAGRYLETYKSY 256
Query: 182 ENKPPDLIMEK 192
E KP DL+ E+
Sbjct: 257 EKKPADLLKEQ 267
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEK 30
+LAWSPEEAG +ETYK +E KP DL+ E+
Sbjct: 238 ILAWSPEEAGRYLETYKSYEKKPADLLKEQ 267
>gi|156739319|ref|NP_001096608.1| DNA excision repair protein ERCC-1 [Danio rerio]
gi|187608525|ref|NP_001120181.1| uncharacterized protein LOC100145222 [Xenopus (Silurana)
tropicalis]
gi|44890524|gb|AAH66697.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 1 [Danio rerio]
gi|156230040|gb|AAI52195.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 1 [Danio rerio]
gi|166796426|gb|AAI59290.1| LOC100145222 protein [Xenopus (Silurana) tropicalis]
Length = 342
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 103/131 (78%), Gaps = 6/131 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S N+I+V+PRQ+GNP+LK + VPWE+ + ++PDYV+GRTTCALFLS++YH L P+Y+ +
Sbjct: 138 SGNSIIVSPRQRGNPILKFVRNVPWEFGE-VVPDYVLGRTTCALFLSVRYHNLNPNYVHE 196
Query: 127 RIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
R+K LG+ + L QVD KDPHHALK L R+C++ D TL+LAWSPEEAG +ETYK +
Sbjct: 197 RLKQLGQSFSLRILLVQVDVKDPHHALKELARICIMADCTLILAWSPEEAGRYLETYKSY 256
Query: 182 ENKPPDLIMEK 192
E KP DL+ E+
Sbjct: 257 EKKPADLLKEQ 267
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEK 30
+LAWSPEEAG +ETYK +E KP DL+ E+
Sbjct: 238 ILAWSPEEAGRYLETYKSYEKKPADLLKEQ 267
>gi|194882957|ref|XP_001975576.1| GG20484 [Drosophila erecta]
gi|190658763|gb|EDV55976.1| GG20484 [Drosophila erecta]
Length = 259
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 107/135 (79%), Gaps = 5/135 (3%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
+LV+ +Q+GNP+LK I VP E+ D I+PDYV+GRT+C L+LS+KYH L PDYI R+K
Sbjct: 63 VLVHSKQRGNPILKSILNVPLEFRDDIVPDYVVGRTSCVLYLSLKYHNLNPDYICQRLKV 122
Query: 131 LGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKP 185
LGK+Y+L QVD+ +P++ALK LTR+ LL DLT+MLAW+ EEAG++IETYK FE +P
Sbjct: 123 LGKMYELRVLLVQVDTPEPNNALKSLTRISLLADLTMMLAWNAEEAGKIIETYKQFEKRP 182
Query: 186 PDLIMEKQDVDPHSK 200
PDLIME+ + +PH K
Sbjct: 183 PDLIMERVESNPHQK 197
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTW----NFDPV 45
MLAW+ EEAG++IETYK FE +PPDLIME+ + +PH K N PV
Sbjct: 160 MLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQKLLAALTNIKPV 208
>gi|170059466|ref|XP_001865376.1| DNA excision repair protein ERCC-1 [Culex quinquefasciatus]
gi|167878242|gb|EDS41625.1| DNA excision repair protein ERCC-1 [Culex quinquefasciatus]
Length = 243
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/141 (58%), Positives = 109/141 (77%), Gaps = 6/141 (4%)
Query: 65 SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYI 124
++ N LV+P+Q GNPLLK I V WEYDD I+PDYV+G T C LF+S++YH L PDYI
Sbjct: 42 AQQGNYFLVSPKQGGNPLLKSIQSVAWEYDD-IVPDYVVGATACILFISLRYHNLNPDYI 100
Query: 125 ADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
R+K LGK+++L QVD ++PH+ALK+LTR+CLL DLTLMLAW+ EEAG+++ETYK
Sbjct: 101 HGRLKQLGKMFELRVLLVQVDIQEPHNALKHLTRICLLADLTLMLAWTAEEAGKIVETYK 160
Query: 180 VFENKPPDLIMEKQDVDPHSK 200
+ E+KPPD IME+ + P+ K
Sbjct: 161 LMEHKPPDAIMERPEKFPYQK 181
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
MLAW+ EEAG+++ETYK+ E+KPPD IME+ + P+ K
Sbjct: 144 MLAWTAEEAGKIVETYKLMEHKPPDAIMERPEKFPYQK 181
>gi|348515709|ref|XP_003445382.1| PREDICTED: DNA excision repair protein ERCC-1-like [Oreochromis
niloticus]
Length = 335
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 114/162 (70%), Gaps = 9/162 (5%)
Query: 47 AAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRT 106
+ Q S S+ P G S ++I+V+PRQ+GNP+LK + VPWE+ D ++PDYV+G+T
Sbjct: 114 SGQRSEPGISLGPKPVG---SGSSIIVSPRQRGNPILKFVRSVPWEFGD-VVPDYVLGQT 169
Query: 107 TCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLT 161
TCALFLS++YH L P+YI DR+K LG + L QVD KDPHHALK L R+C++ D T
Sbjct: 170 TCALFLSLRYHNLNPNYIHDRLKQLGHTFTLRVLLVQVDVKDPHHALKDLARMCIMADCT 229
Query: 162 LMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
L+LAWSPEEAG +ETYK +E KP D++ E+ + D SK +
Sbjct: 230 LILAWSPEEAGRYLETYKSYEKKPADMLKEQVEKDYLSKVTD 271
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
+LAWSPEEAG +ETYK +E KP D++ E+ + D SK +
Sbjct: 231 ILAWSPEEAGRYLETYKSYEKKPADMLKEQVEKDYLSKVTD 271
>gi|73948160|ref|XP_855116.1| PREDICTED: DNA excision repair protein ERCC-1 [Canis lupus
familiaris]
Length = 294
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 115/159 (72%), Gaps = 9/159 (5%)
Query: 44 PVPAAQNSATSESV-QPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYV 102
P P T E+ Q S+ GA SN+I+V+PRQ+GNP+LK + VPWE+ D ++PDYV
Sbjct: 71 PHPTGPEPLTGETPNQASKPGAK--SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VLPDYV 127
Query: 103 MGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLL 157
+G++TCALFLS++YH L PDYI +R+++LGK + L QVD KDP ALK L ++C+L
Sbjct: 128 LGQSTCALFLSLRYHNLHPDYIHERLQSLGKSFALRVLLVQVDVKDPQQALKELAKMCIL 187
Query: 158 CDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 196
D TL+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 188 ADCTLVLAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 226
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 193 VLAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 226
>gi|38112301|gb|AAR11240.1| excision repair protein [Macaca mulatta]
Length = 227
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 107/139 (76%), Gaps = 6/139 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 55 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 113
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 114 LQSLGKNFALRVLLIQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 173
Query: 183 NKPPDLIMEKQDVDPHSKT 201
KP DL+MEK D D S++
Sbjct: 174 QKPADLLMEKLDQDFVSRS 192
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS 60
+LAWSPEEAG +ETYK +E KP DL+MEK D D S++ + ++ A + P
Sbjct: 154 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLDQDFVSRSLEQLIAASREDLALCPGLGPQ 213
Query: 61 RA 62
+A
Sbjct: 214 KA 215
>gi|355703658|gb|EHH30149.1| hypothetical protein EGK_10755 [Macaca mulatta]
Length = 323
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLIQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK D D
Sbjct: 217 QKPADLLMEKLDQD 230
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK D D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLDQD 230
>gi|355755947|gb|EHH59694.1| hypothetical protein EGM_09870 [Macaca fascicularis]
Length = 323
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLIQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK D D
Sbjct: 217 QKPADLLMEKLDQD 230
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK D D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLDQD 230
>gi|432108802|gb|ELK33410.1| DNA excision repair protein ERCC-1 [Myotis davidii]
Length = 267
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 105/134 (78%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D ++PDYV+G++TCALFLS++YH L PDYI +R
Sbjct: 67 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VVPDYVLGQSTCALFLSLRYHNLHPDYIHER 125
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 126 LQSLGKSFALRVLLVQVDVKDPQQALKELAKMCILADCTLVLAWSPEEAGRYLETYKAYE 185
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 186 QKPADLLMEKLEQD 199
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 166 VLAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 199
>gi|410897108|ref|XP_003962041.1| PREDICTED: DNA excision repair protein ERCC-1-like [Takifugu
rubripes]
Length = 349
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 106/139 (76%), Gaps = 6/139 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S ++I+V+PRQ+GNP+LK+I VPWE D ++PDYV+G+TTCALFLS++YH L P+YI D
Sbjct: 147 SGSSIVVSPRQRGNPILKYIRSVPWEIGD-VVPDYVLGQTTCALFLSLRYHNLNPNYIHD 205
Query: 127 RIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
R+K LG+ + L QVD KDPHHAL+ L R+C++ D TL+LAWSPEEAG +ETYK +
Sbjct: 206 RLKLLGQTFTLRVLLVQVDVKDPHHALRELARICVMADCTLVLAWSPEEAGRYLETYKSY 265
Query: 182 ENKPPDLIMEKQDVDPHSK 200
E KP D + E+ + D SK
Sbjct: 266 EKKPADTLKEQVEKDYLSK 284
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+LAWSPEEAG +ETYK +E KP D + E+ + D SK
Sbjct: 247 VLAWSPEEAGRYLETYKSYEKKPADTLKEQVEKDYLSK 284
>gi|301777726|ref|XP_002924284.1| PREDICTED: DNA excision repair protein ERCC-1-like [Ailuropoda
melanoleuca]
Length = 306
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 109/144 (75%), Gaps = 8/144 (5%)
Query: 58 QPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYH 117
Q S+ GA SS I+V+PRQ+GNP+LK + VPWE+ D ++PDYV+G++TCALFLS++YH
Sbjct: 98 QASKPGAKSSS--IIVSPRQRGNPVLKFVRNVPWEFGD-VLPDYVLGQSTCALFLSLRYH 154
Query: 118 ALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAG 172
L PDYI +R+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG
Sbjct: 155 NLHPDYIHERLQSLGKSFALRVLLVQVDVKDPQQALKELAKMCILADCTLVLAWSPEEAG 214
Query: 173 EMIETYKVFENKPPDLIMEKQDVD 196
+ETYK +E KP DL+MEK + D
Sbjct: 215 RYLETYKAYEQKPADLLMEKLEQD 238
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 205 VLAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 238
>gi|281337435|gb|EFB13019.1| hypothetical protein PANDA_013590 [Ailuropoda melanoleuca]
Length = 260
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 109/144 (75%), Gaps = 8/144 (5%)
Query: 58 QPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYH 117
Q S+ GA SS I+V+PRQ+GNP+LK + VPWE+ D ++PDYV+G++TCALFLS++YH
Sbjct: 58 QASKPGAKSSS--IIVSPRQRGNPVLKFVRNVPWEFGD-VLPDYVLGQSTCALFLSLRYH 114
Query: 118 ALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAG 172
L PDYI +R+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG
Sbjct: 115 NLHPDYIHERLQSLGKSFALRVLLVQVDVKDPQQALKELAKMCILADCTLVLAWSPEEAG 174
Query: 173 EMIETYKVFENKPPDLIMEKQDVD 196
+ETYK +E KP DL+MEK + D
Sbjct: 175 RYLETYKAYEQKPADLLMEKLEQD 198
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 165 VLAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 198
>gi|38112299|gb|AAR11239.1| excision repair protein [Pan troglodytes]
Length = 251
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 106/139 (76%), Gaps = 6/139 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 55 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 113
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 114 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 173
Query: 183 NKPPDLIMEKQDVDPHSKT 201
KP DL+MEK + D S+
Sbjct: 174 QKPADLLMEKLEQDFVSRV 192
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKT 39
+LAWSPEEAG +ETYK +E KP DL+MEK + D S+
Sbjct: 154 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRV 192
>gi|42544169|ref|NP_973730.1| DNA excision repair protein ERCC-1 isoform 1 [Homo sapiens]
gi|31127248|gb|AAH52813.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Homo sapiens]
Length = 323
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|402905933|ref|XP_003915762.1| PREDICTED: DNA excision repair protein ERCC-1 isoform 3 [Papio
anubis]
Length = 323
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLIQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|297705160|ref|XP_002829451.1| PREDICTED: DNA excision repair protein ERCC-1 isoform 1 [Pongo
abelii]
Length = 297
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|54696472|gb|AAV38608.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [synthetic construct]
gi|60652851|gb|AAX29120.1| excision repair cross-complementing rodent repair deficiency
complementation group 1 [synthetic construct]
gi|60830454|gb|AAX36930.1| excision repair cross-complementing rodent repair deficiency
complementation group 1 [synthetic construct]
gi|61365104|gb|AAX42654.1| excision repair cross-complementing rodent repair deficiency
complementation group 1 [synthetic construct]
gi|61367243|gb|AAX42971.1| excision repair cross-complementing rodent repair deficiency
complementation group 1 [synthetic construct]
Length = 298
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|189054601|dbj|BAG37398.1| unnamed protein product [Homo sapiens]
Length = 297
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|4503599|ref|NP_001974.1| DNA excision repair protein ERCC-1 isoform 2 [Homo sapiens]
gi|302632548|ref|NP_001181860.1| DNA excision repair protein ERCC-1 [Pan troglodytes]
gi|397493347|ref|XP_003817569.1| PREDICTED: DNA excision repair protein ERCC-1 isoform 1 [Pan
paniscus]
gi|119538|sp|P07992.1|ERCC1_HUMAN RecName: Full=DNA excision repair protein ERCC-1
gi|21105797|gb|AAM34796.1|AF512555_1 excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Homo sapiens]
gi|182174|gb|AAA52394.1| excision repair protein [Homo sapiens]
gi|182177|gb|AAA35810.1| excision repair protein [Homo sapiens]
gi|2583146|gb|AAC16253.1| excision repair protein [Homo sapiens]
gi|14286266|gb|AAH08930.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Homo sapiens]
gi|54696474|gb|AAV38609.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Homo sapiens]
gi|60818953|gb|AAX36483.1| excision repair cross-complementing rodent repair deficiency
complementation group 1 [synthetic construct]
gi|61354943|gb|AAX41079.1| excision repair cross-complementing rodent repair deficiency
complementation group 1 [synthetic construct]
gi|61357235|gb|AAX41356.1| excision repair cross-complementing rodent repair deficiency
complementation group 1 [synthetic construct]
gi|61363050|gb|AAX42326.1| excision repair cross-complementing rodent repair deficiency
complementation group 1 [synthetic construct]
gi|119577752|gb|EAW57348.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence), isoform CRA_a [Homo sapiens]
gi|119577754|gb|EAW57350.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence), isoform CRA_a [Homo sapiens]
gi|123990970|gb|ABM83928.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [synthetic construct]
gi|123999343|gb|ABM87247.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [synthetic construct]
gi|410220356|gb|JAA07397.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410220358|gb|JAA07398.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410220362|gb|JAA07400.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410220364|gb|JAA07401.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410254810|gb|JAA15372.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410254812|gb|JAA15373.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410254818|gb|JAA15376.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410295290|gb|JAA26245.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410295292|gb|JAA26246.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410295298|gb|JAA26249.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410335881|gb|JAA36887.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410335883|gb|JAA36888.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410335887|gb|JAA36890.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410335889|gb|JAA36891.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|225908|prf||1403276A DNA repair gene
Length = 297
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|402905929|ref|XP_003915760.1| PREDICTED: DNA excision repair protein ERCC-1 isoform 1 [Papio
anubis]
Length = 298
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLIQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|395751371|ref|XP_003779251.1| PREDICTED: DNA excision repair protein ERCC-1 [Pongo abelii]
Length = 273
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 107/139 (76%), Gaps = 6/139 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVDPHSKT 201
KP DL+MEK + D S++
Sbjct: 217 QKPADLLMEKLEQDFVSRS 235
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKT 39
+LAWSPEEAG +ETYK +E KP DL+MEK + D S++
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRS 235
>gi|60655939|gb|AAX32533.1| excision repair cross-complementing rodent repair deficiency
complementation group 1 [synthetic construct]
Length = 297
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|260593725|ref|NP_001159521.1| DNA excision repair protein ERCC-1 isoform 3 [Homo sapiens]
gi|397493351|ref|XP_003817571.1| PREDICTED: DNA excision repair protein ERCC-1 isoform 3 [Pan
paniscus]
gi|15146354|dbj|BAB62810.1| excision repair protein 1 [Homo sapiens]
gi|119577753|gb|EAW57349.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence), isoform CRA_b [Homo sapiens]
gi|410220360|gb|JAA07399.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410254814|gb|JAA15374.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410295294|gb|JAA26247.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
gi|410335885|gb|JAA36889.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Pan troglodytes]
Length = 273
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 107/139 (76%), Gaps = 6/139 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVDPHSKT 201
KP DL+MEK + D S++
Sbjct: 217 QKPADLLMEKLEQDFVSRS 235
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS 60
+LAWSPEEAG +ETYK +E KP DL+MEK + D S++ + ++ A + P
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRSLEQLIAASREDLALCPGLGPQ 256
Query: 61 RA 62
+A
Sbjct: 257 KA 258
>gi|426389186|ref|XP_004061005.1| PREDICTED: DNA excision repair protein ERCC-1 isoform 1 [Gorilla
gorilla gorilla]
Length = 297
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|355686444|gb|AER98060.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 [Mustela putorius furo]
Length = 268
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 113/158 (71%), Gaps = 12/158 (7%)
Query: 44 PVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVM 103
P P A +A Q + GA SS I+V+PRQ+GNP+LK + VPWE+ D ++PDYV+
Sbjct: 81 PEPLAGETAN----QAPKPGAKSSS--IIVSPRQRGNPVLKFVRNVPWEFGD-VLPDYVL 133
Query: 104 GRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLC 158
G++TCALFLS++YH L PDYI +R+++LGK + L QVD KDP ALK L ++C+L
Sbjct: 134 GQSTCALFLSLRYHNLHPDYIHERLQSLGKSFALRVLLVQVDVKDPQQALKELAKMCILA 193
Query: 159 DLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 196
D TL+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 194 DCTLVLAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 231
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 198 VLAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 231
>gi|426389190|ref|XP_004061007.1| PREDICTED: DNA excision repair protein ERCC-1 isoform 3 [Gorilla
gorilla gorilla]
Length = 273
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 107/139 (76%), Gaps = 6/139 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVDPHSKT 201
KP DL+MEK + D S++
Sbjct: 217 QKPADLLMEKLEQDFVSRS 235
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS 60
+LAWSPEEAG +ETYK +E KP DL+MEK + D S++ + ++ A + P
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRSLEQLIAASREDLALCPGLGPQ 256
Query: 61 RA 62
+A
Sbjct: 257 KA 258
>gi|115496970|ref|NP_001069853.1| DNA excision repair protein ERCC-1 [Bos taurus]
gi|122145868|sp|Q1LZ75.1|ERCC1_BOVIN RecName: Full=DNA excision repair protein ERCC-1
gi|94534838|gb|AAI16164.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Bos taurus]
gi|296477517|tpg|DAA19632.1| TPA: DNA excision repair protein ERCC-1 [Bos taurus]
Length = 294
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+L+ + VPWE+ D ++PDYV+G++TCALFLS++YH L PDYI R
Sbjct: 94 SNSIIVSPRQRGNPVLRFVRNVPWEFGD-VLPDYVLGQSTCALFLSLRYHNLHPDYIHQR 152
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK Y L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 153 LQSLGKSYALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 212
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 213 QKPADLLMEKLEQD 226
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 193 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 226
>gi|440902295|gb|ELR53102.1| DNA excision repair protein ERCC-1, partial [Bos grunniens mutus]
Length = 298
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+L+ + VPWE+ D ++PDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLRFVRNVPWEFGD-VLPDYVLGQSTCALFLSLRYHNLHPDYIHQR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK Y L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKSYALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|402905935|ref|XP_003915763.1| PREDICTED: DNA excision repair protein ERCC-1 isoform 4 [Papio
anubis]
Length = 274
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 107/139 (76%), Gaps = 6/139 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLIQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVDPHSKT 201
KP DL+MEK + D S++
Sbjct: 217 QKPADLLMEKLEQDFVSRS 235
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS 60
+LAWSPEEAG +ETYK +E KP DL+MEK + D S++ + ++ A + P
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRSLEQLIAASREDLALCPGLGPQ 256
Query: 61 RA 62
+A
Sbjct: 257 KA 258
>gi|327289261|ref|XP_003229343.1| PREDICTED: DNA excision repair protein ERCC-1-like [Anolis
carolinensis]
Length = 332
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 108/149 (72%), Gaps = 8/149 (5%)
Query: 53 TSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFL 112
TS S + G +SS I+V+PRQ+GNP+LK I VPWE+ D I+PDY++G++TCALFL
Sbjct: 107 TSSSNPVLKPGTKQSS--IIVSPRQRGNPVLKFIRNVPWEFGD-IVPDYLLGQSTCALFL 163
Query: 113 SIKYHALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWS 167
S++YH L P+YI DR++ LGK Y LQV D KDPH ALK L ++C+L TL+LAWS
Sbjct: 164 SLRYHNLNPNYIHDRLRNLGKTYALQVLLLQVDVKDPHRALKDLAKICILSSCTLVLAWS 223
Query: 168 PEEAGEMIETYKVFENKPPDLIMEKQDVD 196
PEEAG +ETYK +E KP DL+ EK D D
Sbjct: 224 PEEAGRYLETYKAYEQKPADLLKEKVDKD 252
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+ EK D D
Sbjct: 219 VLAWSPEEAGRYLETYKAYEQKPADLLKEKVDKD 252
>gi|149722206|ref|XP_001502644.1| PREDICTED: DNA excision repair protein ERCC-1-like [Equus caballus]
Length = 291
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 103/134 (76%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D ++PDYV+G++TCALFLS++YH L PDYI R
Sbjct: 91 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VLPDYVLGQSTCALFLSLRYHNLHPDYIHQR 149
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
++ LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 150 LQTLGKSFALRVLLVQVDVKDPQQALKVLAKMCILADCTLVLAWSPEEAGRYLETYKAYE 209
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 210 QKPADLLMEKLEQD 223
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 190 VLAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 223
>gi|431909163|gb|ELK12753.1| DNA excision repair protein ERCC-1 [Pteropus alecto]
Length = 315
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D ++PDYV+G++TCALFLS++YH L PDYI R
Sbjct: 116 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VVPDYVLGQSTCALFLSLRYHNLHPDYIHGR 174
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 175 LQSLGKSFALRVLLVQVDVKDPQRALKDLAKMCILADCTLVLAWSPEEAGRYLETYKAYE 234
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 235 QKPADLLMEKLEQD 248
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 215 VLAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 248
>gi|444730739|gb|ELW71113.1| DNA excision repair protein ERCC-1 [Tupaia chinensis]
Length = 298
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 103/134 (76%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI +R
Sbjct: 98 SNTIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHER 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
++ LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQNLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLVLAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 VLAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|344269327|ref|XP_003406504.1| PREDICTED: DNA excision repair protein ERCC-1-like [Loxodonta
africana]
Length = 298
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 103/134 (76%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D ++PDYV+G +TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VVPDYVLGHSTCALFLSLRYHNLHPDYIHQR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKSFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|348557640|ref|XP_003464627.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cavia
porcellus]
Length = 300
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 103/130 (79%), Gaps = 6/130 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ + +IPDYV+G++TCALFLS++YH L PDYI +R
Sbjct: 100 SNSIIVSPRQRGNPVLKFVRNVPWEFGE-VIPDYVLGQSTCALFLSLRYHNLHPDYIHER 158
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 159 LQSLGKNFALRILLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 218
Query: 183 NKPPDLIMEK 192
KP DL+MEK
Sbjct: 219 QKPADLLMEK 228
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEK 30
+LAWSPEEAG +ETYK +E KP DL+MEK
Sbjct: 199 ILAWSPEEAGRYLETYKAYEQKPADLLMEK 228
>gi|395529691|ref|XP_003766942.1| PREDICTED: DNA excision repair protein ERCC-1 [Sarcophilus
harrisii]
Length = 472
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 103/138 (74%), Gaps = 6/138 (4%)
Query: 64 ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDY 123
A S++I V+PRQ+GNP+LK I VPWE+ + I+PDYVMG++TCALFLS++YH L P+Y
Sbjct: 269 APTKSSSITVSPRQRGNPVLKFIRNVPWEFGE-IVPDYVMGQSTCALFLSLRYHNLHPNY 327
Query: 124 IADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETY 178
I DR++ LGK Y L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETY
Sbjct: 328 IHDRLQGLGKNYALRVLLLQVDVKDPQRALKELAKMCILADCTLILAWSPEEAGRYLETY 387
Query: 179 KVFENKPPDLIMEKQDVD 196
K +E KP DL+ EK + D
Sbjct: 388 KSYEQKPADLLKEKLEQD 405
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+ EK + D
Sbjct: 372 ILAWSPEEAGRYLETYKSYEQKPADLLKEKLEQD 405
>gi|345310668|ref|XP_001517592.2| PREDICTED: DNA excision repair protein ERCC-1-like [Ornithorhynchus
anatinus]
Length = 310
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 105/134 (78%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
S++I+V+PRQ+GNP+LK++ VPW++ D I+PDYV+G++TCALFLS++YH L P+YI +R
Sbjct: 110 SSSIIVSPRQRGNPVLKYVRNVPWQFGD-ILPDYVLGQSTCALFLSLRYHNLHPNYIHER 168
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
++ LGK Y+L QVD KDP H LK L R+CLL + TL+LAWSPEEAG +ETYK +E
Sbjct: 169 LQGLGKTYQLRVLLLQVDVKDPQHILKELARMCLLAECTLILAWSPEEAGRYLETYKAYE 228
Query: 183 NKPPDLIMEKQDVD 196
KP DL+ EK + D
Sbjct: 229 QKPADLLKEKLEQD 242
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+ EK + D
Sbjct: 209 ILAWSPEEAGRYLETYKAYEQKPADLLKEKLEQD 242
>gi|291223501|ref|XP_002731748.1| PREDICTED: excision repair cross-complementing 1-like [Saccoglossus
kowalevskii]
Length = 246
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 101/135 (74%), Gaps = 6/135 (4%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
I+VN +QKGNP+LKHI V WEY D I+ DYVMG+TTCAL+LSI+YH LKPDYI DR+K
Sbjct: 36 IIVNTKQKGNPILKHIRNVSWEYGD-IVADYVMGKTTCALYLSIRYHNLKPDYIHDRLKQ 94
Query: 131 LGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKP 185
LG Y+L QVD KDPHHA+K LT++ + D TL+LAW+PEE G +ETYK +ENKP
Sbjct: 95 LGHSYELRILLVQVDVKDPHHAVKDLTKIAIRSDCTLILAWTPEEVGRYLETYKSYENKP 154
Query: 186 PDLIMEKQDVDPHSK 200
D++ EK D S+
Sbjct: 155 ADILKEKVQSDFMSR 169
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+LAW+PEE G +ETYK +ENKP D++ EK D S+
Sbjct: 132 ILAWTPEEVGRYLETYKSYENKPADILKEKVQSDFMSR 169
>gi|157819415|ref|NP_001099698.1| DNA excision repair protein ERCC-1 [Rattus norvegicus]
gi|149056779|gb|EDM08210.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (predicted), isoform CRA_a
[Rattus norvegicus]
gi|149056780|gb|EDM08211.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 298
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 110/153 (71%), Gaps = 7/153 (4%)
Query: 45 VPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMG 104
VP AT +S + +KSS+ I+V+PRQ+GNP+LK + VPWE+ + + PDYV+G
Sbjct: 76 VPTGSEPATGDSPSQTLKAGTKSSS-IIVSPRQRGNPVLKFVRSVPWEFGE-VTPDYVLG 133
Query: 105 RTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCD 159
++TCALFLS++YH L PDYI +R+++LGK + L QVD KDP ALK L ++C+L D
Sbjct: 134 QSTCALFLSLRYHNLHPDYIHERLQSLGKNFALRVLLVQVDVKDPQQALKELAKICILAD 193
Query: 160 LTLMLAWSPEEAGEMIETYKVFENKPPDLIMEK 192
TL+LAWS EEAG +ETYK +E KP DL+MEK
Sbjct: 194 CTLVLAWSAEEAGRYLETYKAYEQKPADLLMEK 226
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEK 30
+LAWS EEAG +ETYK +E KP DL+MEK
Sbjct: 197 VLAWSAEEAGRYLETYKAYEQKPADLLMEK 226
>gi|61357240|gb|AAX41357.1| excision repair cross-complementing rodent repair deficiency
complementation group 1 [synthetic construct]
Length = 297
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 103/134 (76%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 157 LQSLGKNFALRVLLVQVDVKDPQQALKEQAKMCILADCTLILAWSPEEAGRYLETYKAYE 216
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 217 QKPADLLMEKLEQD 230
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 230
>gi|187960064|ref|NP_031974.2| DNA excision repair protein ERCC-1 isoform a [Mus musculus]
gi|408360078|sp|P07903.2|ERCC1_MOUSE RecName: Full=DNA excision repair protein ERCC-1
gi|15029977|gb|AAH11224.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 1 [Mus musculus]
gi|26353238|dbj|BAC40249.1| unnamed protein product [Mus musculus]
gi|74203782|dbj|BAE23112.1| unnamed protein product [Mus musculus]
gi|148691190|gb|EDL23137.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 [Mus musculus]
Length = 298
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 111/154 (72%), Gaps = 9/154 (5%)
Query: 45 VPAAQNSATSES-VQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVM 103
VP A E+ Q + GA SN+I+V+PRQ+GNP+LK + VPWE+ + +IPDYV+
Sbjct: 76 VPTGSEPAAGENPSQTLKTGAK--SNSIIVSPRQRGNPVLKFVRNVPWEFGE-VIPDYVL 132
Query: 104 GRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLC 158
G++TCALFLS++YH L PDYI +R+++LGK + L QVD KDP ALK L ++C+L
Sbjct: 133 GQSTCALFLSLRYHNLHPDYIHERLQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILA 192
Query: 159 DLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEK 192
D TL+LAWS EEAG +ETYK +E KP DL+MEK
Sbjct: 193 DCTLVLAWSAEEAGRYLETYKAYEQKPADLLMEK 226
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEK 30
+LAWS EEAG +ETYK +E KP DL+MEK
Sbjct: 197 VLAWSAEEAGRYLETYKAYEQKPADLLMEK 226
>gi|410982710|ref|XP_003997691.1| PREDICTED: DNA excision repair protein ERCC-1 [Felis catus]
Length = 306
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
S++I+V+PRQ+GNP+LK + VPWE+ D ++PDYV+G++TCALFLS++YH L PDYI R
Sbjct: 106 SSSIIVSPRQRGNPVLKFVRNVPWEFGD-VLPDYVLGQSTCALFLSLRYHNLHPDYIHGR 164
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 165 LQSLGKSFALRVLLVQVDVKDPQQALKELAKMCILADCTLVLAWSPEEAGRYLETYKAYE 224
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 225 QKPADLLMEKLEQD 238
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 205 VLAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 238
>gi|126329589|ref|XP_001365997.1| PREDICTED: DNA excision repair protein ERCC-1-like [Monodelphis
domestica]
Length = 326
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 103/134 (76%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+ILV+PRQ+GNP+LK I VPWE+ + I+PDYV+G++TCALFLS++YH L P+YI +R
Sbjct: 126 SNSILVSPRQRGNPVLKFIRNVPWEFGE-IVPDYVLGQSTCALFLSLRYHNLHPNYIHER 184
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
++ LGK Y L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 185 LQGLGKNYALRVLLLQVDVKDPQRALKDLAKMCILADCTLILAWSPEEAGRYLETYKSYE 244
Query: 183 NKPPDLIMEKQDVD 196
KP DL+ EK + D
Sbjct: 245 QKPADLLKEKLEQD 258
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+ EK + D
Sbjct: 225 ILAWSPEEAGRYLETYKSYEQKPADLLKEKLEQD 258
>gi|187960071|ref|NP_001120796.1| DNA excision repair protein ERCC-1 isoform b [Mus musculus]
Length = 245
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 111/154 (72%), Gaps = 9/154 (5%)
Query: 45 VPAAQNSATSES-VQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVM 103
VP A E+ Q + GA SN+I+V+PRQ+GNP+LK + VPWE+ + +IPDYV+
Sbjct: 76 VPTGSEPAAGENPSQTLKTGAK--SNSIIVSPRQRGNPVLKFVRNVPWEFGE-VIPDYVL 132
Query: 104 GRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLC 158
G++TCALFLS++YH L PDYI +R+++LGK + L QVD KDP ALK L ++C+L
Sbjct: 133 GQSTCALFLSLRYHNLHPDYIHERLQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILA 192
Query: 159 DLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEK 192
D TL+LAWS EEAG +ETYK +E KP DL+MEK
Sbjct: 193 DCTLVLAWSAEEAGRYLETYKAYEQKPADLLMEK 226
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEK 30
+LAWS EEAG +ETYK +E KP DL+MEK
Sbjct: 197 VLAWSAEEAGRYLETYKAYEQKPADLLMEK 226
>gi|50855|emb|CAA30310.1| unnamed protein product [Mus musculus]
Length = 298
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 111/154 (72%), Gaps = 9/154 (5%)
Query: 45 VPAAQNSATSES-VQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVM 103
VP A E+ Q + GA SN+I+V+PRQ+GNP+LK + VPWE+ + +IPDYV+
Sbjct: 76 VPTGSEPAAGENPSQTLKTGAK--SNSIIVSPRQRGNPVLKFVRNVPWEFGE-VIPDYVL 132
Query: 104 GRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLC 158
G++TCALFLS++YH L PDYI +R+++LGK + L QVD KDP ALK L ++C+L
Sbjct: 133 GQSTCALFLSLRYHNLHPDYIHERLQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILA 192
Query: 159 DLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEK 192
D TL+LAWS EEAG +ETY+ +E KP DL+MEK
Sbjct: 193 DCTLVLAWSAEEAGRYLETYRAYEQKPADLLMEK 226
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEK 30
+LAWS EEAG +ETY+ +E KP DL+MEK
Sbjct: 197 VLAWSAEEAGRYLETYRAYEQKPADLLMEK 226
>gi|73536053|pdb|2A1I|A Chain A, Crystal Structure Of The Central Domain Of Human Ercc1
Length = 146
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 102/130 (78%), Gaps = 6/130 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 17 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 75
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 76 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 135
Query: 183 NKPPDLIMEK 192
KP DL+MEK
Sbjct: 136 QKPADLLMEK 145
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEK 30
+LAWSPEEAG +ETYK +E KP DL+MEK
Sbjct: 116 ILAWSPEEAGRYLETYKAYEQKPADLLMEK 145
>gi|226533697|ref|NP_001152781.1| DNA excision repair protein ERCC-1 [Sus scrofa]
gi|226354716|gb|ACO50967.1| excision repair cross-complementing rodent repair deficiency
complementation group 1 [Sus scrofa]
Length = 294
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+L+ + VPW++ D ++PDYV+G++TCALFLS++YH L PDYI R
Sbjct: 94 SNSIIVSPRQRGNPVLRFVRNVPWQFGD-VLPDYVLGQSTCALFLSLRYHNLHPDYIHQR 152
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP AL+ L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 153 LQSLGKSFALRVLLVQVDVKDPQQALRDLAKMCILADCTLILAWSPEEAGRYLETYKAYE 212
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 213 QKPADLLMEKLEQD 226
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 193 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 226
>gi|405957268|gb|EKC23492.1| DNA excision repair protein ERCC-1 [Crassostrea gigas]
Length = 457
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 110/150 (73%), Gaps = 8/150 (5%)
Query: 58 QPSRAGASKS--SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIK 115
+PS A KS +N+++VN RQ+GNP+LK I +P+E+ D IIPDY MG+T CALFLS++
Sbjct: 153 EPSIPTAVKSLNTNSLIVNSRQRGNPILKFIRSIPYEFGD-IIPDYEMGKTACALFLSLR 211
Query: 116 YHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEE 170
YH L P+YI +R+K L + Y L QVD K+PHH +K L ++C+L D TL+LA+S EE
Sbjct: 212 YHQLNPNYIHERLKQLRRYYDLRVLLVQVDIKEPHHLVKELAKICILADCTLILAFSAEE 271
Query: 171 AGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
AG +ETYKV+E+KPPD IMEK + D SK
Sbjct: 272 AGRYLETYKVYEHKPPDAIMEKTEKDYMSK 301
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS 60
+LA+S EEAG +ETYKV+E+KPPD IMEK + D SK + SV+
Sbjct: 264 ILAFSAEEAGRYLETYKVYEHKPPDAIMEKTEKDYMSKV-----------TECLTSVRSY 312
Query: 61 RAGASKSSNAILVNPR-----QKGNPLLKHIGKVPWE 92
R A +S R KG+P+L GK E
Sbjct: 313 RLAAYRSRRKFKTERRPFHYVPKGHPVLPPDGKYTTE 349
>gi|350539469|ref|NP_001233733.1| DNA excision repair protein ERCC-1 [Cricetulus griseus]
gi|6576543|dbj|BAA88319.1| ERCC1 [Cricetulus griseus]
Length = 293
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 105/140 (75%), Gaps = 8/140 (5%)
Query: 58 QPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYH 117
Q + GA SN+ILV+PRQ+GNP+LK + VPWE+ + + PDYV+G++TCALFLS++YH
Sbjct: 85 QTVKTGAK--SNSILVSPRQRGNPVLKFVRNVPWEFGE-VTPDYVLGQSTCALFLSLRYH 141
Query: 118 ALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAG 172
L PDYI +R+++LGK + L QVD KDP ALK L ++C+L D TL+LAWS EEAG
Sbjct: 142 NLHPDYIHERLQSLGKSFALRVLLVQVDVKDPQKALKDLAKMCILADCTLVLAWSAEEAG 201
Query: 173 EMIETYKVFENKPPDLIMEK 192
+ETYK +E KP DL+MEK
Sbjct: 202 RYLETYKAYEQKPADLLMEK 221
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEK 30
+LAWS EEAG +ETYK +E KP DL+MEK
Sbjct: 192 VLAWSAEEAGRYLETYKAYEQKPADLLMEK 221
>gi|226442650|ref|NP_001140125.1| DNA excision repair protein ERCC-1 [Salmo salar]
gi|221220050|gb|ACM08686.1| DNA excision repair protein ERCC-1 [Salmo salar]
Length = 383
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 106/142 (74%), Gaps = 6/142 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S N+I+V+PRQ+GNP+LK + VPWE+ + ++PDYV+G+TTCALFLS++YH L P+YI D
Sbjct: 179 SGNSIIVSPRQRGNPILKFVRSVPWEFGE-VVPDYVLGQTTCALFLSLRYHNLNPNYIHD 237
Query: 127 RIKALGKLYKLQVDS-----KDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
R+K LG+ + L+V KDPHH+LK L R+C++ D TL+LAWSPEEAG +ETYK +
Sbjct: 238 RLKLLGQTFTLRVLLVLVDVKDPHHSLKELARICIMADCTLILAWSPEEAGRYLETYKSY 297
Query: 182 ENKPPDLIMEKQDVDPHSKTWN 203
E KP DL+ E + D SK +
Sbjct: 298 EKKPADLLKEHVEKDYLSKVTD 319
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
+LAWSPEEAG +ETYK +E KP DL+ E + D SK +
Sbjct: 279 ILAWSPEEAGRYLETYKSYEKKPADLLKEHVEKDYLSKVTD 319
>gi|443725998|gb|ELU13340.1| hypothetical protein CAPTEDRAFT_166856 [Capitella teleta]
Length = 261
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 110/162 (67%), Gaps = 12/162 (7%)
Query: 44 PVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVM 103
P P + +S T +P+R N I+V+ RQ+GNP+LKHI V WE+ +++ DY +
Sbjct: 7 PGPGSSSSKTESPSRPAR------KNCIIVSSRQRGNPILKHIRNVAWEFGETV-ADYEL 59
Query: 104 GRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLC 158
G TTCALFLS++YH L P+YI +R+K LG Y L+V D KDPHH L+ L VC+L
Sbjct: 60 GLTTCALFLSLRYHLLTPNYIHERLKQLGHCYNLRVLLVLIDVKDPHHCLQELASVCILS 119
Query: 159 DLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
D TLM+A+SPEEAG +ETYK FE KPPDLIMEK + + SK
Sbjct: 120 DCTLMVAFSPEEAGRYLETYKSFETKPPDLIMEKTEANFLSK 161
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 30/38 (78%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
M+A+SPEEAG +ETYK FE KPPDLIMEK + + SK
Sbjct: 124 MVAFSPEEAGRYLETYKSFETKPPDLIMEKTEANFLSK 161
>gi|148226773|ref|NP_001080498.1| excision repair cross-complementing 1 [Xenopus laevis]
gi|27696909|gb|AAH43824.1| Ercc1-prov protein [Xenopus laevis]
Length = 289
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 120/180 (66%), Gaps = 12/180 (6%)
Query: 25 DLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPSRAGASKSSNA---ILVNPRQKGNP 81
D I +K+ DP K F + A++N+ + V+ + +KS+ A ILV+ RQ+GN
Sbjct: 54 DYIFQKEAWDPVQK-GQFSNMAASENAVSI--VKQTTNQTTKSAGAGSCILVSTRQRGNS 110
Query: 82 LLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL---- 137
LLK++ VPWE+ D I+PDY++G T C+LFLS++YH L P+YI R+++LG+ + L
Sbjct: 111 LLKYLRNVPWEFSD-IVPDYILGETCCSLFLSLRYHNLNPEYIHSRLRSLGQSFALRVLL 169
Query: 138 -QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 196
QVD KDPH +LK L ++C+L D TL+L+WSPEEA +ETYK +E KP D + E+ + D
Sbjct: 170 VQVDVKDPHFSLKELAKICILSDCTLILSWSPEEAARYLETYKCYEQKPADALKERTEKD 229
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+L+WSPEEA +ETYK +E KP D + E+ + D
Sbjct: 196 ILSWSPEEAARYLETYKCYEQKPADALKERTEKD 229
>gi|158429049|pdb|2JPD|A Chain A, Solution Structure Of The Ercc1 Central Domain
Length = 135
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 97/126 (76%), Gaps = 6/126 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 4 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 62
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 63 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 122
Query: 183 NKPPDL 188
KP L
Sbjct: 123 QKPGGL 128
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDL 26
+LAWSPEEAG +ETYK +E KP L
Sbjct: 103 ILAWSPEEAGRYLETYKAYEQKPGGL 128
>gi|449663991|ref|XP_004205849.1| PREDICTED: uncharacterized protein LOC101236335 [Hydra
magnipapillata]
Length = 446
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 103/142 (72%), Gaps = 6/142 (4%)
Query: 64 ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDY 123
+K+SNAI+VN +Q+GNP+LK + +PWEY D I+ DY +G+T CA+FLS++YH+L PDY
Sbjct: 97 TAKNSNAIIVNSKQRGNPILKFVHNIPWEYGD-IVADYEIGQTACAMFLSLRYHSLNPDY 155
Query: 124 IADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETY 178
I DR++ LG Y L+ VD + + +LK L ++ LL + TL+LAWS EEAG +ET+
Sbjct: 156 IHDRLQLLGNRYTLRILLVLVDIEKTNASLKKLAKISLLANCTLILAWSNEEAGRYLETF 215
Query: 179 KVFENKPPDLIMEKQDVDPHSK 200
K +ENKPPD++ E+ D D SK
Sbjct: 216 KTYENKPPDILQERIDQDYVSK 237
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+LAWS EEAG +ET+K +ENKPPD++ E+ D D SK
Sbjct: 200 ILAWSNEEAGRYLETFKTYENKPPDILQERIDQDYVSK 237
>gi|432934227|ref|XP_004081917.1| PREDICTED: DNA excision repair protein ERCC-1-like [Oryzias
latipes]
Length = 308
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 94/121 (77%), Gaps = 6/121 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S ++I+V+PRQ+GNP+LK + VPWE+ D ++PDYV+G+TTCALFLS++YH L P+YI +
Sbjct: 137 SGSSIIVSPRQRGNPILKFVRSVPWEFGD-VVPDYVLGQTTCALFLSLRYHNLNPNYIHE 195
Query: 127 RIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
R+K LG + L QVD KDPHHALK L R+ ++ D TL+LAWSPEEAG +ETYK +
Sbjct: 196 RLKQLGNSFTLRVLLVQVDVKDPHHALKELARIGVMADCTLILAWSPEEAGRYLETYKSY 255
Query: 182 E 182
E
Sbjct: 256 E 256
>gi|402905931|ref|XP_003915761.1| PREDICTED: DNA excision repair protein ERCC-1 isoform 2 [Papio
anubis]
Length = 226
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 98/134 (73%), Gaps = 6/134 (4%)
Query: 73 VNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALG 132
V P +GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R+++LG
Sbjct: 31 VPPGVRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLG 89
Query: 133 KLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPD 187
K + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E KP D
Sbjct: 90 KNFALRVLLIQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPAD 149
Query: 188 LIMEKQDVDPHSKT 201
L+MEK + D S+
Sbjct: 150 LLMEKLEQDFVSRV 163
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESV 57
+LAWSPEEAG +ETYK +E KP DL+MEK + D S+ + N S+++
Sbjct: 125 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLTTVKSVNKTDSQTL 181
>gi|397493349|ref|XP_003817570.1| PREDICTED: DNA excision repair protein ERCC-1 isoform 2 [Pan
paniscus]
gi|193787266|dbj|BAG52472.1| unnamed protein product [Homo sapiens]
Length = 225
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 98/134 (73%), Gaps = 6/134 (4%)
Query: 73 VNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALG 132
V P +GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R+++LG
Sbjct: 31 VPPGVRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLG 89
Query: 133 KLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPD 187
K + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E KP D
Sbjct: 90 KNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPAD 149
Query: 188 LIMEKQDVDPHSKT 201
L+MEK + D S+
Sbjct: 150 LLMEKLEQDFVSRV 163
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESV 57
+LAWSPEEAG +ETYK +E KP DL+MEK + D S+ + N S+++
Sbjct: 125 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLTTVKSVNKTDSQTL 181
>gi|166157967|ref|NP_001107393.1| excision repair cross-complementing rodent repair deficiency,
complementation group 1 (includes overlapping antisense
sequence) [Xenopus (Silurana) tropicalis]
gi|163916074|gb|AAI57332.1| LOC100135224 protein [Xenopus (Silurana) tropicalis]
gi|213625729|gb|AAI71208.1| hypothetical protein LOC100135224 [Xenopus (Silurana) tropicalis]
gi|213627374|gb|AAI71206.1| hypothetical protein LOC100135224 [Xenopus (Silurana) tropicalis]
Length = 268
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 106/148 (71%), Gaps = 8/148 (5%)
Query: 58 QPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYH 117
Q +++ +SS I+V+ RQ+GN LLK++ VPWE+ + IIPDYV+G T CALFLS++YH
Sbjct: 56 QTTKSVGVRSS--IIVSTRQRGNSLLKYLRNVPWEFGN-IIPDYVLGETCCALFLSLRYH 112
Query: 118 ALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAG 172
L P+YI R+++LG+ + L QVD KDPH +LK L ++C+L D TL+L+WSPEEA
Sbjct: 113 NLNPEYIHLRLRSLGQSFALRVLLVQVDVKDPHFSLKELAKICILSDCTLILSWSPEEAA 172
Query: 173 EMIETYKVFENKPPDLIMEKQDVDPHSK 200
+ETYK +E KP D++ E+ + D S+
Sbjct: 173 RYLETYKCYEQKPADVLKERTEKDLMSR 200
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+L+WSPEEA +ETYK +E KP D++ E+ + D S+
Sbjct: 163 ILSWSPEEAARYLETYKCYEQKPADVLKERTEKDLMSR 200
>gi|426389188|ref|XP_004061006.1| PREDICTED: DNA excision repair protein ERCC-1 isoform 2 [Gorilla
gorilla gorilla]
Length = 225
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 98/134 (73%), Gaps = 6/134 (4%)
Query: 73 VNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALG 132
+ P +GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R+++LG
Sbjct: 31 IPPGVRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLG 89
Query: 133 KLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPD 187
K + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E KP D
Sbjct: 90 KNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPAD 149
Query: 188 LIMEKQDVDPHSKT 201
L+MEK + D S+
Sbjct: 150 LLMEKLEQDFVSRV 163
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESV 57
+LAWSPEEAG +ETYK +E KP DL+MEK + D S+ + N S+++
Sbjct: 125 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLTTVKSVNKTDSQTL 181
>gi|254656355|gb|ACT76272.1| excision repair cross-complementing rodent repair deficiency
complementation group 1, partial [Sebastiscus
marmoratus]
Length = 118
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 91/119 (76%), Gaps = 6/119 (5%)
Query: 75 PRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKL 134
PRQ+GNP+LK + VPWE+ D ++PDYV+G+TTCALFLS++YH L P+YI DR+K LG+
Sbjct: 1 PRQRGNPILKFVRSVPWEFGD-VVPDYVLGQTTCALFLSLRYHNLNPNYIHDRLKQLGQT 59
Query: 135 YKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDL 188
+ L QVD KDPHH LK L R+C++ D TL+LAWS EEAG +ET+K ++ KP DL
Sbjct: 60 FTLRVLLVQVDVKDPHHTLKELARICIVADCTLILAWSSEEAGRYLETFKSYDQKPADL 118
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 20/26 (76%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDL 26
+LAWS EEAG +ET+K ++ KP DL
Sbjct: 93 ILAWSSEEAGRYLETFKSYDQKPADL 118
>gi|73980826|ref|XP_540176.2| PREDICTED: uncharacterized protein LOC483061 [Canis lupus
familiaris]
Length = 461
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%), Gaps = 6/125 (4%)
Query: 77 QKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYK 136
Q+GNP+LK + VPWE+ D ++PDYV+G++TCALFLS++YH L PDY+ +R+++LGK +
Sbjct: 270 QRGNPVLKFVRNVPWEFGD-VLPDYVLGQSTCALFLSLRYHNLHPDYLHERLQSLGKSFA 328
Query: 137 L-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIME 191
L QVD KDP ALK L ++C+L TL+LAWSPEEAG +ETYK +E KP +L+ME
Sbjct: 329 LRVLLVQVDVKDPQQALKELAKMCILAYCTLVLAWSPEEAGRYLETYKAYEQKPANLLME 388
Query: 192 KQDVD 196
K + D
Sbjct: 389 KLEQD 393
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP +L+MEK + D
Sbjct: 360 VLAWSPEEAGRYLETYKAYEQKPANLLMEKLEQD 393
>gi|358253365|dbj|GAA52919.1| DNA excision repair protein ERCC-1 [Clonorchis sinensis]
Length = 342
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 89/127 (70%), Gaps = 6/127 (4%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
NAILVN RQ+GNPLLKHI V WEY + I PDYV+GR C FLS++YH L P+YI +R+
Sbjct: 141 NAILVNQRQRGNPLLKHIHNVAWEYAE-IEPDYVVGRNNCVYFLSLRYHKLNPEYIFERV 199
Query: 129 KALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
+ + Y+L QVD DPH+ LK L ++CL LTLMLAWSPEEA +E YK EN
Sbjct: 200 RQTKQNYQLSVLLCQVDITDPHYPLKELCKLCLAEKLTLMLAWSPEEAARYLEAYKALEN 259
Query: 184 KPPDLIM 190
KPPD +M
Sbjct: 260 KPPDDLM 266
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIM 28
MLAWSPEEA +E YK ENKPPD +M
Sbjct: 239 MLAWSPEEAARYLEAYKALENKPPDDLM 266
>gi|196016209|ref|XP_002117958.1| hypothetical protein TRIADDRAFT_61989 [Trichoplax adhaerens]
gi|190579431|gb|EDV19526.1| hypothetical protein TRIADDRAFT_61989 [Trichoplax adhaerens]
Length = 265
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 100/139 (71%), Gaps = 8/139 (5%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
++N I VNP+Q+GNP++++I VP EY D I+PDYV+G+TTCAL+L +YH L P+YI +
Sbjct: 54 NTNCITVNPKQRGNPIIQYITSVPLEYGD-IVPDYVLGKTTCALYL--RYHNLHPNYIHE 110
Query: 127 RIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
R+K LG +++ QVD KD AL L R+ ++ D TL+LAWS EEAG +ETYK +
Sbjct: 111 RLKKLGYAFEMRILLVQVDLKDCQQALNELARIAVMADCTLILAWSSEEAGRYLETYKAY 170
Query: 182 ENKPPDLIMEKQDVDPHSK 200
ENKPPDL+ EK D D SK
Sbjct: 171 ENKPPDLLKEKVDKDYLSK 189
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+LAWS EEAG +ETYK +ENKPPDL+ EK D D SK
Sbjct: 152 ILAWSSEEAGRYLETYKAYENKPPDLLKEKVDKDYLSK 189
>gi|47226306|emb|CAG09274.1| unnamed protein product [Tetraodon nigroviridis]
Length = 180
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 95/129 (73%), Gaps = 6/129 (4%)
Query: 78 KGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL 137
+GNP+LK++ VPWE+ D ++PDYV+G+TTCALFLS++YH L P+YI DR+K LG+ + L
Sbjct: 1 RGNPILKYVRSVPWEFGD-VVPDYVLGQTTCALFLSLRYHNLNPNYIHDRLKHLGQTFTL 59
Query: 138 -----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEK 192
QVD KDPHHAL+ L ++C+ D TL+LAW PEEAG +ETYK +E KP D + E+
Sbjct: 60 RVLLVQVDVKDPHHALRELAQICVKADCTLILAWRPEEAGRYLETYKSYEKKPADALKEQ 119
Query: 193 QDVDPHSKT 201
+ D SK
Sbjct: 120 VEKDYLSKV 128
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKT 39
+LAW PEEAG +ETYK +E KP D + E+ + D SK
Sbjct: 90 ILAWRPEEAGRYLETYKSYEKKPADALKEQVEKDYLSKV 128
>gi|351706988|gb|EHB09907.1| DNA excision repair protein ERCC-1 [Heterocephalus glaber]
Length = 483
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 94/123 (76%), Gaps = 7/123 (5%)
Query: 75 PRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKL 134
P ++GNP+LK + VPWE+ + +IPDYV+G +TCALFLS++YH L PDYI +R+++LGK
Sbjct: 243 PGKRGNPVLKFVRNVPWEFGE-VIPDYVLG-STCALFLSLRYHNLHPDYIHERLQSLGKN 300
Query: 135 YKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLI 189
+ L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E KP DL+
Sbjct: 301 FALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLL 360
Query: 190 MEK 192
MEK
Sbjct: 361 MEK 363
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Query: 46 PAAQNSATSESVQPSRAGASKS--------SNAILVNPRQKGNPLLKHIGKVPWEYDDSI 97
PA +AT + S AG + + SN+I+V+PRQ+GNP+LK + VPWE+ + +
Sbjct: 126 PAGGAAATCPTGSDSLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVPWEFGE-V 184
Query: 98 IPDYVMGRTTCALFLSIKYHAL 119
IPDYV+G++TCALFLS+ L
Sbjct: 185 IPDYVLGQSTCALFLSLTRLVL 206
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS 60
+LAWSPEEAG +ETYK +E KP DL+MEK + + S+ + N S+++ S
Sbjct: 334 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEHNFVSRVTECLSSVKSVNKTDSQTLL-S 392
Query: 61 RAGASKSSNAILVNPRQKGN 80
GA SS L PRQ G
Sbjct: 393 TFGACASSQGYLGGPRQLGQ 412
>gi|159794885|pdb|2JNW|A Chain A, Solution Structure Of A Ercc1-Xpa Heterodimer
Length = 133
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/117 (59%), Positives = 92/117 (78%), Gaps = 6/117 (5%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 17 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 75
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK
Sbjct: 76 LQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYK 132
>gi|19112907|ref|NP_596115.1| DNA repair endonuclease Swi10 [Schizosaccharomyces pombe 972h-]
gi|549012|sp|Q06182.1|SWI10_SCHPO RecName: Full=Mating-type switching protein swi10
gi|5111|emb|CAA43928.1| SWI10 [Schizosaccharomyces pombe]
gi|3560148|emb|CAA20735.1| DNA repair endonuclease Swi10 [Schizosaccharomyces pombe]
Length = 252
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 101/153 (66%), Gaps = 7/153 (4%)
Query: 58 QPSRAGASK-SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKY 116
QP+ S+ ++++ILVNPRQKGNPLL H+ VPWEY D I+PD+VMG C+LFLS+KY
Sbjct: 29 QPTPQKVSRVTAHSILVNPRQKGNPLLPHVRNVPWEYTD-IVPDFVMGTGICSLFLSLKY 87
Query: 117 HALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEA 171
H L P+YI RI LGK Y L+ VD ++ +++ L + ++ TL+LAWS EEA
Sbjct: 88 HHLHPEYIYSRISKLGKSYNLRILLILVDVENHQASIQELVKTSIVNQYTLILAWSSEEA 147
Query: 172 GEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
+ETYK +EN P LIMEK D S+ +F
Sbjct: 148 ARYLETYKAYENMSPALIMEKPSTDYLSQVQSF 180
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 42
+LAWS EEA +ETYK +EN P LIMEK D S+ +F
Sbjct: 139 ILAWSSEEAARYLETYKAYENMSPALIMEKPSTDYLSQVQSF 180
>gi|71024273|ref|XP_762366.1| hypothetical protein UM06219.1 [Ustilago maydis 521]
gi|46101824|gb|EAK87057.1| hypothetical protein UM06219.1 [Ustilago maydis 521]
Length = 334
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 98/151 (64%), Gaps = 6/151 (3%)
Query: 58 QPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYH 117
+P GA+++ N ILVN Q+GNP+L+H+ + WEY D I+PDY +G + C LFLSI+YH
Sbjct: 67 RPLIRGAARTGNTILVNNCQRGNPVLQHMRNIGWEYAD-IVPDYQVGLSACVLFLSIRYH 125
Query: 118 ALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAG 172
L P+Y+ R++ L +Y L++ D D A+K LT+ C++ LTLMLAWS EEA
Sbjct: 126 RLHPEYVHTRVQKLAHMYTLRILLVLCDVTDHQAAIKELTKTCVINKLTLMLAWSAEEAA 185
Query: 173 EMIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
+ETYK FE KPPD I E+ D S+ N
Sbjct: 186 RYLETYKSFELKPPDAIKERVGDDYLSQVTN 216
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
MLAWS EEA +ETYK FE KPPD I E+ D S+ N
Sbjct: 176 MLAWSAEEAARYLETYKSFELKPPDAIKERVGDDYLSQVTN 216
>gi|343427963|emb|CBQ71488.1| related to dna excision repair protein ercc-1 [Sporisorium
reilianum SRZ2]
Length = 352
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 99/151 (65%), Gaps = 6/151 (3%)
Query: 58 QPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYH 117
+P GA+ + N ILVN Q+GNP+L+HI + WEY D I+PDY +G + C LFLSI+YH
Sbjct: 65 RPLIRGAAGTGNTILVNNCQRGNPVLQHIRNIGWEYAD-IVPDYQVGVSACVLFLSIRYH 123
Query: 118 ALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAG 172
L P+Y+ RI L +++ L+V D D A+K LT+ L+ +LTL++AW+ +EAG
Sbjct: 124 RLHPEYVHTRIAKLAQMFTLRVLLVLCDVNDHQSAIKELTKTALINNLTLVIAWTADEAG 183
Query: 173 EMIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
IETYK FE KPPDLI E+ D S+ N
Sbjct: 184 RYIETYKSFEFKPPDLIKERVGEDFPSQITN 214
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
++AW+ +EAG IETYK FE KPPDLI E+ D S+ N
Sbjct: 174 VIAWTADEAGRYIETYKSFEFKPPDLIKERVGEDFPSQITN 214
>gi|388857631|emb|CCF48780.1| related to dna excision repair protein ercc-1 [Ustilago hordei]
Length = 363
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 98/149 (65%), Gaps = 6/149 (4%)
Query: 61 RAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALK 120
R + SS+ ILVNP Q+GNPLL I + WEY D I+PDYV+G ++C LFLSI+YH L
Sbjct: 64 RGKLASSSSTILVNPCQRGNPLLSSIRSLGWEYSD-IVPDYVVGVSSCILFLSIRYHRLH 122
Query: 121 PDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMI 175
P+YI RI L ++ L++ D KD A+K LT+ L+ +LTL++AWS EEAG +
Sbjct: 123 PEYIHTRIAKLSNMFTLRILLLLCDVKDHAPAIKELTKTALINNLTLIVAWSAEEAGRYV 182
Query: 176 ETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
ETYK FE+KPPD I E+ D S+ N
Sbjct: 183 ETYKSFEHKPPDPIKERVPEDYLSQLTNV 211
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 42
++AWS EEAG +ETYK FE+KPPD I E+ D S+ N
Sbjct: 170 IVAWSAEEAGRYVETYKSFEHKPPDPIKERVPEDYLSQLTNV 211
>gi|443899763|dbj|GAC77092.1| structure-specific endonuclease ERCC1-XPF, ERCC1 component
[Pseudozyma antarctica T-34]
Length = 494
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 97/146 (66%), Gaps = 6/146 (4%)
Query: 63 GASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPD 122
GA S +LVN Q+GNP+L+HI + WEY D I+PDY +G ++C LFLSI+YH L P+
Sbjct: 214 GAQGSGTTVLVNNCQRGNPVLQHIRNIGWEYAD-IVPDYQVGLSSCVLFLSIRYHRLHPE 272
Query: 123 YIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIET 177
Y+ RI L ++Y L+V D D A++ LT+V ++ LT++LAWS EEAG+ IET
Sbjct: 273 YVHTRISKLQQMYTLRVLLVLCDVNDHQAAIRELTKVSMINSLTMVLAWSAEEAGKYIET 332
Query: 178 YKVFENKPPDLIMEKQDVDPHSKTWN 203
YK FE+KPPD I E+ D ++ N
Sbjct: 333 YKSFEHKPPDAIKERIGEDYLAQVTN 358
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
+LAWS EEAG+ IETYK FE+KPPD I E+ D ++ N
Sbjct: 318 VLAWSAEEAGKYIETYKSFEHKPPDAIKERIGEDYLAQVTN 358
>gi|388578772|gb|EIM19109.1| DNA repair protein rad10 [Wallemia sebi CBS 633.66]
Length = 317
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 96/152 (63%), Gaps = 6/152 (3%)
Query: 57 VQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKY 116
Q R S NA+LVN Q+GNP+LK + V WEY D I+PDYV G +T LFLS++Y
Sbjct: 22 TQSPRRALPNSKNAVLVNSCQRGNPILKEVRNVSWEYTD-IVPDYVAGSSTGILFLSLRY 80
Query: 117 HALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEA 171
H L P+YI R++ LG +Y+L++ D D ++K +T+ CL+ ++T+++AWSP++A
Sbjct: 81 HRLHPEYIHTRVERLGAMYQLRILLLMCDVTDSEASIKEITKTCLINNITVVIAWSPQQA 140
Query: 172 GEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
G + Y +NKPPD + EK D HS N
Sbjct: 141 GHYLSLYLQLDNKPPDSLREKSSTDYHSMVAN 172
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
++AWSP++AG + Y +NKPPD + EK D HS N
Sbjct: 132 VIAWSPQQAGHYLSLYLQLDNKPPDSLREKSSTDYHSMVAN 172
>gi|393227898|gb|EJD35559.1| DNA repair protein rad10 [Auricularia delicata TFB-10046 SS5]
Length = 359
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 97/135 (71%), Gaps = 6/135 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S ++ILVN Q+GNP+L+HI V E+ D I+PD+ MGRTTCALFLS+KYH L P+YI
Sbjct: 20 SGSSILVNTCQRGNPVLEHIRNVAKEWSD-IVPDFQMGRTTCALFLSLKYHRLHPEYIHT 78
Query: 127 RIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RI+ L +Y L++ D + +++ LT+VCL+ ++T+++AWSPEE G + T+KV+
Sbjct: 79 RIQRLVHMYTLRILLIHCDITEHQDSIRELTKVCLINNMTIIVAWSPEECGLYLSTFKVY 138
Query: 182 ENKPPDLIMEKQDVD 196
E+KPPD I E+ D D
Sbjct: 139 EHKPPDAIRERIDKD 153
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
++AWSPEE G + T+KV+E+KPPD I E+ D D
Sbjct: 120 IVAWSPEECGLYLSTFKVYEHKPPDAIRERIDKD 153
>gi|297829042|ref|XP_002882403.1| hypothetical protein ARALYDRAFT_477808 [Arabidopsis lyrata subsp.
lyrata]
gi|297328243|gb|EFH58662.1| hypothetical protein ARALYDRAFT_477808 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 98/158 (62%), Gaps = 11/158 (6%)
Query: 49 QNSATSESVQPSRAGA-----SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVM 103
Q S S P G+ +++ NAILV+ RQKGNPLLKHI V W + D IIPDYV+
Sbjct: 98 QTDGASSSSTPVATGSLPSNTTQTRNAILVSHRQKGNPLLKHIRNVKWVFSD-IIPDYVL 156
Query: 104 GRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLC 158
G+++CAL+LS++YH L PDY+ RI+ L K +KL VD +D L +T+ LL
Sbjct: 157 GQSSCALYLSLRYHLLHPDYLYFRIRELQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLH 216
Query: 159 DLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 196
D TL+ AWS E +ET KV+ENKP DLI + D D
Sbjct: 217 DCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTD 254
Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ AWS E +ET KV+ENKP DLI + D D
Sbjct: 221 LCAWSMTECARYLETIKVYENKPADLIQGQMDTD 254
>gi|15229933|ref|NP_187172.1| DNA excision repair protein ERCC-1 [Arabidopsis thaliana]
gi|55976606|sp|Q9MA98.1|ERCC1_ARATH RecName: Full=DNA excision repair protein ERCC-1; Short=AtERCC1;
Short=AtRAD10; AltName: Full=Ultraviolet hypersensitive
7
gi|6729031|gb|AAF27027.1|AC009177_17 putative nucleotide repair protein [Arabidopsis thaliana]
gi|9800490|gb|AAF99316.1|AF276082_1 ERCC1 [Arabidopsis thaliana]
gi|15215614|gb|AAK91352.1| AT3g05210/T12H1_18 [Arabidopsis thaliana]
gi|21435979|gb|AAM51569.1| AT3g05210/T12H1_18 [Arabidopsis thaliana]
gi|21618171|gb|AAM67221.1| putative nucleotide repair protein [Arabidopsis thaliana]
gi|332640684|gb|AEE74205.1| DNA excision repair protein ERCC-1 [Arabidopsis thaliana]
Length = 410
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 102/167 (61%), Gaps = 7/167 (4%)
Query: 35 PHSKTWNFDPVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYD 94
PHS + A +S+T + + +++ NAILV+ RQKGNPLLKHI V W +
Sbjct: 91 PHSSSQTHQ-TDGASSSSTPVATGSVPSNTTQNRNAILVSHRQKGNPLLKHIRNVKWVFS 149
Query: 95 DSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALK 149
D IIPDYV+G+ +CAL+LS++YH L PDY+ RI+ L K +KL VD +D L
Sbjct: 150 D-IIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLSVVLCHVDVEDTVKPLL 208
Query: 150 YLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 196
+T+ LL D TL+ AWS E +ET KV+ENKP DLI + D D
Sbjct: 209 EVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTD 255
Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ AWS E +ET KV+ENKP DLI + D D
Sbjct: 222 LCAWSMTECARYLETIKVYENKPADLIQGQMDTD 255
>gi|242033937|ref|XP_002464363.1| hypothetical protein SORBIDRAFT_01g016980 [Sorghum bicolor]
gi|241918217|gb|EER91361.1| hypothetical protein SORBIDRAFT_01g016980 [Sorghum bicolor]
Length = 397
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 93/140 (66%), Gaps = 6/140 (4%)
Query: 62 AGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKP 121
A +S NAILV+ RQ+GNPLLKHI W + D ++PDYV+G+++CAL+LSI+YH L P
Sbjct: 105 APTRQSKNAILVSHRQRGNPLLKHIRNARWTFAD-VVPDYVLGQSSCALYLSIRYHLLHP 163
Query: 122 DYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
DY+ RI+ L K ++L+ VD +D L +TR LL D TL+ WS EE G +E
Sbjct: 164 DYLYYRIRELQKNFRLRVILCHVDVEDVIKPLHEITRTALLHDCTLLCGWSLEECGRYLE 223
Query: 177 TYKVFENKPPDLIMEKQDVD 196
T KV+ENKP D+I E D D
Sbjct: 224 TIKVYENKPADIIREHMDND 243
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ WS EE G +ET KV+ENKP D+I E D D
Sbjct: 210 LCGWSLEECGRYLETIKVYENKPADIIREHMDND 243
>gi|326512966|dbj|BAK03390.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 95/144 (65%), Gaps = 10/144 (6%)
Query: 62 AGA----SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYH 117
AGA S+S N+ILV+ RQKGNPLLKHI W + D I+PDYV+G+++CAL++S++YH
Sbjct: 93 AGATTTPSQSKNSILVSNRQKGNPLLKHIRNARWTFAD-IVPDYVIGQSSCALYISLRYH 151
Query: 118 ALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAG 172
L PDY+ RI+ L K +KL+V D +D L +TR LL D TL+ WS EE G
Sbjct: 152 LLHPDYLYYRIRELQKNFKLRVILCHIDIEDVVKPLHEITRTSLLHDCTLLCGWSLEECG 211
Query: 173 EMIETYKVFENKPPDLIMEKQDVD 196
+ET KVFENKP D I E D D
Sbjct: 212 RYLETIKVFENKPADSIREHTDND 235
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ WS EE G +ET KVFENKP D I E D D
Sbjct: 202 LCGWSLEECGRYLETIKVFENKPADSIREHTDND 235
>gi|353240901|emb|CCA72747.1| related to dna excision repair protein ercc-1 [Piriformospora
indica DSM 11827]
Length = 247
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 96/137 (70%), Gaps = 6/137 (4%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
++ILVNP Q+GNPLL HI V +++ + I PDY +G TTC LFLS+KYH L P+YI RI
Sbjct: 15 SSILVNPVQRGNPLLSHIRHVAYQFAE-IAPDYQVGSTTCVLFLSLKYHRLHPEYIHGRI 73
Query: 129 KALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
+ + LY L++ D + ++ LTR+CL+ +LT+M+AW+ EEAG + TYK+FE+
Sbjct: 74 EKIQGLYGLRILLLVCDVTEHQDYIRELTRICLINNLTIMVAWTLEEAGVYLSTYKLFEH 133
Query: 184 KPPDLIMEKQDVDPHSK 200
KPPDLI E+ D D S+
Sbjct: 134 KPPDLIKERVDNDYDSR 150
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
M+AW+ EEAG + TYK+FE+KPPDLI E+ D D S+
Sbjct: 113 MVAWTLEEAGVYLSTYKLFEHKPPDLIKERVDNDYDSR 150
>gi|56757477|gb|AAW26906.1| SJCHGC00905 protein [Schistosoma japonicum]
Length = 355
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 84/126 (66%), Gaps = 6/126 (4%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIK 129
AILVN RQ+GNP+LKHI V WEY D I PD+V+GR C FLS++YH L +YI +R++
Sbjct: 155 AILVNQRQRGNPVLKHIRNVAWEYAD-IEPDFVVGRNNCIYFLSLRYHNLNSEYIFERLR 213
Query: 130 ALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
+ Y+L QVD DP++ LK L ++C LTLMLAW EEA +E YK ENK
Sbjct: 214 QTKQRYQLSVLLVQVDVPDPYYPLKELCKICWTEGLTLMLAWKTEEAARYLEAYKALENK 273
Query: 185 PPDLIM 190
PPD +M
Sbjct: 274 PPDSLM 279
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 19/28 (67%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIM 28
MLAW EEA +E YK ENKPPD +M
Sbjct: 252 MLAWKTEEAARYLEAYKALENKPPDSLM 279
>gi|357147056|ref|XP_003574205.1| PREDICTED: DNA excision repair protein ERCC-1-like [Brachypodium
distachyon]
Length = 391
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 94/143 (65%), Gaps = 7/143 (4%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR A +S N ILV+ RQKGNPLLKHI W + D I+PDYV+G+++CAL++S++YH
Sbjct: 94 PSRP-AVQSKNTILVSNRQKGNPLLKHIRNARWSFAD-IVPDYVIGQSSCALYISLRYHL 151
Query: 119 LKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L PDY+ RI+ L K +KL+V D +D L +TR LL D TL+ WS EE G
Sbjct: 152 LHPDYLYYRIRELQKDFKLRVILCHIDIEDVVKPLHEVTRTSLLHDCTLLCGWSLEECGR 211
Query: 174 MIETYKVFENKPPDLIMEKQDVD 196
+ET KVFENKP D I E D D
Sbjct: 212 YLETIKVFENKPADSIREHTDND 234
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ WS EE G +ET KVFENKP D I E D D
Sbjct: 201 LCGWSLEECGRYLETIKVFENKPADSIREHTDND 234
>gi|449441216|ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
sativus]
Length = 391
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 91/133 (68%), Gaps = 6/133 (4%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
NAILV+ RQKGNPLLKHI V W + D ++PDY++G+++CAL+LS++YH L PDY+ RI
Sbjct: 111 NAILVSNRQKGNPLLKHIRNVRWAFAD-VVPDYLLGQSSCALYLSLRYHLLHPDYLYYRI 169
Query: 129 KALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
+ L K +KL+ VD +D L +T+ LL D TL+ AWS EE G +ET KV+EN
Sbjct: 170 RELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYEN 229
Query: 184 KPPDLIMEKQDVD 196
KP DLI D D
Sbjct: 230 KPADLIQGHMDTD 242
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ AWS EE G +ET KV+ENKP DLI D D
Sbjct: 209 LCAWSLEECGRYLETIKVYENKPADLIQGHMDTD 242
>gi|224130994|ref|XP_002328427.1| predicted protein [Populus trichocarpa]
gi|222838142|gb|EEE76507.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 99/151 (65%), Gaps = 10/151 (6%)
Query: 59 PSRAGAS----KSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSI 114
PS A +S +S NAILV+ RQKGNPLLKHI V W + D ++ DY++G+++CAL+LS+
Sbjct: 81 PSMASSSVQNNQSRNAILVSHRQKGNPLLKHIRNVKWAFAD-VVCDYLLGQSSCALYLSL 139
Query: 115 KYHALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPE 169
+YH L PDY+ RI+ L K KL+V D +D L +T+ LL D TL+ AWS E
Sbjct: 140 RYHLLHPDYLYYRIRELQKNCKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLE 199
Query: 170 EAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
E G +ET K++ENKP DLI + D D S+
Sbjct: 200 ECGRYLETIKMYENKPADLIQGQMDTDYSSR 230
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+ AWS EE G +ET K++ENKP DLI + D D S+
Sbjct: 193 LCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYSSR 230
>gi|212721946|ref|NP_001131279.1| uncharacterized protein LOC100192592 [Zea mays]
gi|194691068|gb|ACF79618.1| unknown [Zea mays]
gi|414870731|tpg|DAA49288.1| TPA: mating-type switching protein swi10 [Zea mays]
Length = 397
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 66 KSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIA 125
+S N+ILV+ RQ+GNPLLKHI W + D ++PDYV+G+++CAL+LSI+YH L PDY+
Sbjct: 105 QSKNSILVSHRQRGNPLLKHIRNARWTFAD-VVPDYVLGQSSCALYLSIRYHLLHPDYLY 163
Query: 126 DRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKV 180
RI+ L K ++L+ VD +D L +TR LL D TL+ WS EE G +ET KV
Sbjct: 164 YRIRELQKNFRLRVILCHVDVEDVIKPLHEITRTALLHDCTLLCGWSLEECGRYLETIKV 223
Query: 181 FENKPPDLIMEKQDVD 196
+ENKP D I E D D
Sbjct: 224 YENKPADSIREHMDND 239
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ WS EE G +ET KV+ENKP D I E D D
Sbjct: 206 LCGWSLEECGRYLETIKVYENKPADSIREHMDND 239
>gi|359487720|ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
gi|296088298|emb|CBI36743.3| unnamed protein product [Vitis vinifera]
Length = 398
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 93/137 (67%), Gaps = 6/137 (4%)
Query: 65 SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYI 124
++S NAILV+ RQKGNPLLKHI V W++ D I+ DY++G+ +CAL+LS++YH L PDY+
Sbjct: 102 AQSRNAILVSHRQKGNPLLKHIRNVRWDFAD-IVCDYLLGQNSCALYLSLRYHLLHPDYL 160
Query: 125 ADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
RI+ L K +KL+V D +D L +TR LL D TL+ AWS EE G +ET K
Sbjct: 161 YYRIRELQKNFKLRVVLCHVDVEDVIKPLLEVTRTALLHDCTLLCAWSLEECGRYLETIK 220
Query: 180 VFENKPPDLIMEKQDVD 196
V+ENK D+I + D D
Sbjct: 221 VYENKSADIIQGQTDTD 237
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ AWS EE G +ET KV+ENK D+I + D D
Sbjct: 204 LCAWSLEECGRYLETIKVYENKSADIIQGQTDTD 237
>gi|195657333|gb|ACG48134.1| mating-type switching protein swi10 [Zea mays]
Length = 396
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 91/136 (66%), Gaps = 6/136 (4%)
Query: 66 KSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIA 125
+S N+ILV+ RQ+GNPLLKHI W + D ++PDYV+G+++CAL+LSI+YH L PDY+
Sbjct: 104 QSKNSILVSHRQRGNPLLKHIRNARWTFAD-VVPDYVLGQSSCALYLSIRYHLLHPDYLY 162
Query: 126 DRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKV 180
RI+ + K ++L+ VD +D L +TR LL D TL+ WS EE G +ET KV
Sbjct: 163 YRIREMQKNFRLRVILCHVDVEDVIKPLHEITRTALLHDCTLLCGWSLEECGRYLETIKV 222
Query: 181 FENKPPDLIMEKQDVD 196
+ENKP D I E D D
Sbjct: 223 YENKPADSIREHMDND 238
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ WS EE G +ET KV+ENKP D I E D D
Sbjct: 205 LCGWSLEECGRYLETIKVYENKPADSIREHMDND 238
>gi|402224423|gb|EJU04486.1| DNA repair protein rad10 [Dacryopinax sp. DJM-731 SS1]
Length = 363
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 93/144 (64%), Gaps = 7/144 (4%)
Query: 58 QPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYH 117
QP R A S +I+VNP Q+GN +L I VPWEY I PDY +G TT LFLS++YH
Sbjct: 29 QPPRP-AGGGSTSIIVNPCQRGNTVLDAIKNVPWEYGQ-IAPDYQVGATTGVLFLSLRYH 86
Query: 118 ALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAG 172
L P+YI RI L Y L+V D + ++ LT+VCL+ +LT+M+AW+PEEAG
Sbjct: 87 RLHPEYIHTRIGKLEGRYMLRVLLMMCDVTEHEEPIRELTKVCLINNLTIMVAWTPEEAG 146
Query: 173 EMIETYKVFENKPPDLIMEKQDVD 196
+ TYK+FE+KPPD I E+ D D
Sbjct: 147 LYLSTYKLFEHKPPDRIKERVDKD 170
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
M+AW+PEEAG + TYK+FE+KPPD I E+ D D
Sbjct: 137 MVAWTPEEAGLYLSTYKLFEHKPPDRIKERVDKD 170
>gi|297277349|ref|XP_001105868.2| PREDICTED: DNA excision repair protein ERCC-1 [Macaca mulatta]
Length = 213
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 82/106 (77%), Gaps = 6/106 (5%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI R
Sbjct: 98 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHGR 156
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSP 168
+++LGK + L QVD KDP ALK L ++C+L D TL+LAW P
Sbjct: 157 LQSLGKNFALRVLLIQVDVKDPQQALKELAKMCILADCTLILAWRP 202
>gi|390479159|ref|XP_002762336.2| PREDICTED: DNA excision repair protein ERCC-1 [Callithrix jacchus]
Length = 238
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 87/117 (74%), Gaps = 8/117 (6%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ+GNP+LK + VPWE+ D +IPDYV+G++TCALFLS++YH L PDYI +R
Sbjct: 70 SNSIIVSPRQRGNPVLKFVRNVPWEFGD-VIPDYVLGQSTCALFLSLRYHNLHPDYIHER 128
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
++ LGK + L QVD KDP ALK L ++C+L D TL+LAWS + E + T K
Sbjct: 129 LQNLGKNFALRVLLIQVDVKDPQQALKELAKMCILADCTLILAWS--QVTECLTTVK 183
>gi|449520473|ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
sativus]
Length = 412
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 90/133 (67%), Gaps = 6/133 (4%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
NAILV+ RQKGNPLLKHI W + D ++PDY++G+++CAL+LS++YH L PDY+ RI
Sbjct: 110 NAILVSNRQKGNPLLKHIRNARWAFAD-VVPDYLLGQSSCALYLSLRYHLLHPDYLYYRI 168
Query: 129 KALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
+ L K +KL+ VD +D L +T+ LL D TL+ AWS EE G +ET KV+EN
Sbjct: 169 RELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYEN 228
Query: 184 KPPDLIMEKQDVD 196
KP DLI D D
Sbjct: 229 KPADLIQGHMDTD 241
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ AWS EE G +ET KV+ENKP DLI D D
Sbjct: 208 LCAWSLEECGRYLETIKVYENKPADLIQGHMDTD 241
>gi|10122039|gb|AAG13428.1|AC051634_9 putative nucleotide repair protein [Oryza sativa Japonica Group]
Length = 395
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 90/140 (64%), Gaps = 6/140 (4%)
Query: 62 AGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKP 121
+ A NAILV+ RQKGNPLLKHI W Y D I+PDYV+G+++CAL++S++YH L P
Sbjct: 96 SAAQAPKNAILVSHRQKGNPLLKHIRNARWTYAD-IVPDYVLGQSSCALYISLRYHLLHP 154
Query: 122 DYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
DY+ RI+ L K +KL+V D +D L +TR LL D TL+ WS EE G +E
Sbjct: 155 DYLYYRIRELQKNFKLRVILCHIDVEDVVKPLHEVTRTSLLHDCTLLCGWSLEECGRYLE 214
Query: 177 TYKVFENKPPDLIMEKQDVD 196
T KV+ENK D I E D D
Sbjct: 215 TIKVYENKSADSIREHMDND 234
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ WS EE G +ET KV+ENK D I E D D
Sbjct: 201 LCGWSLEECGRYLETIKVYENKSADSIREHMDND 234
>gi|342320051|gb|EGU11994.1| Hypothetical Protein RTG_01874 [Rhodotorula glutinis ATCC 204091]
Length = 332
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 87/131 (66%), Gaps = 6/131 (4%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
N+ILVN RQKGNP++ HI VPWEY D I DY +G T L+LSI+YH L P+YI RI
Sbjct: 109 NSILVNVRQKGNPVIGHIRTVPWEYGD-IKCDYQVGATAGVLYLSIRYHLLHPEYIHTRI 167
Query: 129 KALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
+ LG+ Y L Q D+ + A+K LT+V ++ TL+ WS +EAG +ETYK FE
Sbjct: 168 QDLGQNYNLRIILCQCDTDNHTAAMKELTKVAIVNGYTLITCWSAQEAGRYLETYKSFER 227
Query: 184 KPPDLIMEKQD 194
KPPDLI E+ D
Sbjct: 228 KPPDLIRERVD 238
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQD 32
+ WS +EAG +ETYK FE KPPDLI E+ D
Sbjct: 207 ITCWSAQEAGRYLETYKSFERKPPDLIRERVD 238
>gi|357441595|ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago truncatula]
gi|355480123|gb|AES61326.1| DNA excision repair protein ERCC-1 [Medicago truncatula]
Length = 401
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 99/150 (66%), Gaps = 6/150 (4%)
Query: 52 ATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALF 111
A S ++ S + +++ NAILV+ RQKGNPLLKHI V W + D ++ D+++G+++CAL+
Sbjct: 92 AASPNLPNSNSQPTQNRNAILVSNRQKGNPLLKHIRNVRWTFAD-VVCDFLLGQSSCALY 150
Query: 112 LSIKYHALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAW 166
LS++YH L PDY+ RI+ L K +KL+V D +D L +T+ LL D TL+ W
Sbjct: 151 LSLRYHLLHPDYLYHRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCGW 210
Query: 167 SPEEAGEMIETYKVFENKPPDLIMEKQDVD 196
S EE G +ET KV+ENKP D+I + D D
Sbjct: 211 SLEECGRYLETIKVYENKPADIIQGQMDTD 240
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ WS EE G +ET KV+ENKP D+I + D D
Sbjct: 207 LCGWSLEECGRYLETIKVYENKPADIIQGQMDTD 240
>gi|115482968|ref|NP_001065077.1| Os10g0518900 [Oryza sativa Japonica Group]
gi|78708916|gb|ABB47891.1| DNA excision repair protein ERCC-1, putative, expressed [Oryza
sativa Japonica Group]
gi|113639686|dbj|BAF26991.1| Os10g0518900 [Oryza sativa Japonica Group]
gi|215697952|dbj|BAG92132.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 387
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 90/140 (64%), Gaps = 6/140 (4%)
Query: 62 AGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKP 121
+ A NAILV+ RQKGNPLLKHI W Y D I+PDYV+G+++CAL++S++YH L P
Sbjct: 96 SAAQAPKNAILVSHRQKGNPLLKHIRNARWTYAD-IVPDYVLGQSSCALYISLRYHLLHP 154
Query: 122 DYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
DY+ RI+ L K +KL+V D +D L +TR LL D TL+ WS EE G +E
Sbjct: 155 DYLYYRIRELQKNFKLRVILCHIDVEDVVKPLHEVTRTSLLHDCTLLCGWSLEECGRYLE 214
Query: 177 TYKVFENKPPDLIMEKQDVD 196
T KV+ENK D I E D D
Sbjct: 215 TIKVYENKSADSIREHMDND 234
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ WS EE G +ET KV+ENK D I E D D
Sbjct: 201 LCGWSLEECGRYLETIKVYENKSADSIREHMDND 234
>gi|222613143|gb|EEE51275.1| hypothetical protein OsJ_32175 [Oryza sativa Japonica Group]
Length = 430
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 90/140 (64%), Gaps = 6/140 (4%)
Query: 62 AGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKP 121
+ A NAILV+ RQKGNPLLKHI W Y D I+PDYV+G+++CAL++S++YH L P
Sbjct: 139 SAAQAPKNAILVSHRQKGNPLLKHIRNARWTYAD-IVPDYVLGQSSCALYISLRYHLLHP 197
Query: 122 DYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
DY+ RI+ L K +KL+V D +D L +TR LL D TL+ WS EE G +E
Sbjct: 198 DYLYYRIRELQKNFKLRVILCHIDVEDVVKPLHEVTRTSLLHDCTLLCGWSLEECGRYLE 257
Query: 177 TYKVFENKPPDLIMEKQDVD 196
T KV+ENK D I E D D
Sbjct: 258 TIKVYENKSADSIREHMDND 277
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ WS EE G +ET KV+ENK D I E D D
Sbjct: 244 LCGWSLEECGRYLETIKVYENKSADSIREHMDND 277
>gi|378729231|gb|EHY55690.1| DNA excision repair protein ERCC-1 [Exophiala dermatitidis
NIH/UT8656]
Length = 387
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 92/141 (65%), Gaps = 12/141 (8%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIP-DYVMGRTTCALFLSIKYH 117
P R G S AILV+ RQKGNP+LKH+ VPWE+ + IP DYV+G TTCALFLS+KYH
Sbjct: 50 PQRQGPS----AILVSTRQKGNPILKHVTSVPWEWAE--IPCDYVLGATTCALFLSLKYH 103
Query: 118 ALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAG 172
L P+YI RI+ LGKLY L+ VD + ALK L++ ++ +LTL+L WS +EAG
Sbjct: 104 RLHPEYIYGRIRQLGKLYNLRILLTMVDITNHEEALKELSKTSMINNLTLILCWSSQEAG 163
Query: 173 EMIETYKVFENKPPDLIMEKQ 193
+E YK +E+ I Q
Sbjct: 164 RYLELYKSYEHASAASIRAHQ 184
>gi|390601934|gb|EIN11327.1| DNA repair protein rad10 [Punctularia strigosozonata HHB-11173 SS5]
Length = 363
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 96/140 (68%), Gaps = 9/140 (6%)
Query: 62 AGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKP 121
AG+ K+ I+VNP Q+ NP+L+HI V E+ D I+ DY +GRTT LFLS+KYH L P
Sbjct: 19 AGSGKN---IIVNPAQRLNPVLEHIRNVGKEFGD-ILSDYQVGRTTGVLFLSLKYHRLHP 74
Query: 122 DYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
+YI RI+ LG Y L++ D + ++ LT+VCL+ ++T+++AWSPEEAG +
Sbjct: 75 EYIHQRIERLGHSYSLRILLLMCDVSEHQEPIRELTKVCLINNITIIVAWSPEEAGMYLS 134
Query: 177 TYKVFENKPPDLIMEKQDVD 196
T+K FE++PPD+I E+ D D
Sbjct: 135 TFKQFEHRPPDMIKERVDKD 154
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
++AWSPEEAG + T+K FE++PPD+I E+ D D
Sbjct: 121 IVAWSPEEAGMYLSTFKQFEHRPPDMIKERVDKD 154
>gi|395331255|gb|EJF63636.1| DNA repair protein rad10 [Dichomitus squalens LYAD-421 SS1]
Length = 371
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 94/138 (68%), Gaps = 6/138 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
+ N I+VNP Q+GNP+L+ + V EY D I+ DY +GRTT LFLS++YH L P+YI
Sbjct: 26 TGNNIIVNPCQRGNPILECVRNVGKEYGD-ILADYQVGRTTGVLFLSLRYHRLHPEYIHQ 84
Query: 127 RIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RI+ LG Y L++ D + ++ LT++CL+ ++T+M+AW+ EEAG + TYK F
Sbjct: 85 RIEKLGHAYNLRILLLMCDVSEHQEPIRELTKICLINEITVMVAWNAEEAGYYLSTYKQF 144
Query: 182 ENKPPDLIMEKQDVDPHS 199
E+KPPDLI E+ D D +S
Sbjct: 145 EHKPPDLIKERVDKDYNS 162
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHS 37
M+AW+ EEAG + TYK FE+KPPDLI E+ D D +S
Sbjct: 126 MVAWNAEEAGYYLSTYKQFEHKPPDLIKERVDKDYNS 162
>gi|3297891|emb|CAA05781.1| nucleotide repair protein [Lilium longiflorum]
Length = 278
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 94/141 (66%), Gaps = 6/141 (4%)
Query: 65 SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYI 124
++ NAILV+ RQKGNPLLKHI V W + D I+ DY++G+++CAL+LS++YH L PDY+
Sbjct: 27 GQNRNAILVSHRQKGNPLLKHIRNVKWVFAD-IVCDYLVGQSSCALYLSLRYHLLHPDYL 85
Query: 125 ADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
RI+ L K +KL+V D +D L +TR +L D TL+ WS EE G +ET K
Sbjct: 86 YYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTRTAMLHDCTLLCGWSLEECGRYLETIK 145
Query: 180 VFENKPPDLIMEKQDVDPHSK 200
V+ENKP D I E+ D D S+
Sbjct: 146 VYENKPADSIREQMDTDYLSR 166
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+ WS EE G +ET KV+ENKP D I E+ D D S+
Sbjct: 129 LCGWSLEECGRYLETIKVYENKPADSIREQMDTDYLSR 166
>gi|218184890|gb|EEC67317.1| hypothetical protein OsI_34337 [Oryza sativa Indica Group]
Length = 430
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 90/140 (64%), Gaps = 6/140 (4%)
Query: 62 AGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKP 121
+ A NAILV+ RQKGNPLLKHI W Y D I+PDYV+G+++CAL++S++YH L P
Sbjct: 139 SAAQAPKNAILVSHRQKGNPLLKHIRNARWTYAD-IVPDYVLGQSSCALYISLRYHLLHP 197
Query: 122 DYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
DY+ RI+ L K +KL+V D +D L +TR LL D TL+ WS EE G +E
Sbjct: 198 DYLYYRIRELQKNFKLRVILCHIDVEDVVKPLHEVTRTSLLHDCTLLCGWSLEECGRYLE 257
Query: 177 TYKVFENKPPDLIMEKQDVD 196
T KV+ENK D I E + D
Sbjct: 258 TIKVYENKSADSIREHMEND 277
>gi|449546425|gb|EMD37394.1| hypothetical protein CERSUDRAFT_114066 [Ceriporiopsis subvermispora
B]
Length = 339
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 90/138 (65%), Gaps = 6/138 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S N I++NPRQ+ NP+L+ I V E+ D I+ D+ +GRTT LFLS+KYH L P YI
Sbjct: 30 SGNNIIINPRQRQNPVLQCIRNVGKEFGD-IVADFQVGRTTGVLFLSLKYHRLFPAYIHQ 88
Query: 127 RIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RI+ LG Y L Q D D ++ LT+ CL+ ++T+M+AW+ EE G + TYK F
Sbjct: 89 RIEELGHSYNLRILLIQCDVSDHQETIRELTKTCLINNITIMVAWTAEEVGHYLSTYKQF 148
Query: 182 ENKPPDLIMEKQDVDPHS 199
E+KPPD+I E+ D D +S
Sbjct: 149 EHKPPDMIKERIDKDYYS 166
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHS 37
M+AW+ EE G + TYK FE+KPPD+I E+ D D +S
Sbjct: 130 MVAWTAEEVGHYLSTYKQFEHKPPDMIKERIDKDYYS 166
>gi|328768907|gb|EGF78952.1| hypothetical protein BATDEDRAFT_90338 [Batrachochytrium
dendrobatidis JAM81]
Length = 223
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 95/148 (64%), Gaps = 6/148 (4%)
Query: 58 QPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYH 117
QPS + A A++VN Q+GNP+L +I VPWEY ++ DY +G+TT +FLS+KYH
Sbjct: 13 QPSSSLAKPRLRAVIVNTNQEGNPVLDYIKNVPWEYGETD-ADYQVGKTTGVIFLSLKYH 71
Query: 118 ALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAG 172
L P+YI R++ + + + L+ VD D ++K LTR C+ T++LAWS +EAG
Sbjct: 72 RLYPEYIDTRLRQIERKFYLRILICVVDVDDHQQSIKELTRTCIFGKTTMILAWSRQEAG 131
Query: 173 EMIETYKVFENKPPDLIMEKQDVDPHSK 200
IET K +ENKPPDLI ++ D D SK
Sbjct: 132 RYIETLKSYENKPPDLIKKRVDDDYFSK 159
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+LAWS +EAG IET K +ENKPPDLI ++ D D SK
Sbjct: 122 ILAWSRQEAGRYIETLKSYENKPPDLIKKRVDDDYFSK 159
>gi|169607321|ref|XP_001797080.1| hypothetical protein SNOG_06717 [Phaeosphaeria nodorum SN15]
gi|160701389|gb|EAT85368.2| hypothetical protein SNOG_06717 [Phaeosphaeria nodorum SN15]
Length = 436
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 94/151 (62%), Gaps = 10/151 (6%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+G S +ILV+PRQKGNPLL ++ V WEY D I DYV+G TTCALFLS+KYH
Sbjct: 36 PSRSGPS----SILVSPRQKGNPLLNNVRSVAWEYSD-IPADYVVGATTCALFLSLKYHR 90
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI +RI+ L Y L+ VD ++ LK L++ L+ ++T+ML WS +EAG
Sbjct: 91 LHPEYIYNRIRDLKGQYNLRILLTMVDIENHEEPLKELSKTSLVNNVTVMLCWSAQEAGR 150
Query: 174 MIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
+E +K FEN P I +Q K F
Sbjct: 151 YLELFKTFENAAPTSIRAQQSSTYSEKMVEF 181
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQN 50
ML WS +EAG +E +K FEN P I +Q K F VP + N
Sbjct: 140 MLCWSAQEAGRYLELFKTFENAAPTSIRAQQSSTYSEKMVEFITVPRSIN 189
>gi|302782932|ref|XP_002973239.1| hypothetical protein SELMODRAFT_98787 [Selaginella moellendorffii]
gi|300158992|gb|EFJ25613.1| hypothetical protein SELMODRAFT_98787 [Selaginella moellendorffii]
Length = 232
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 95/143 (66%), Gaps = 11/143 (7%)
Query: 65 SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYI 124
S+S NAILV+ RQ+GNP+LK I V W +DD I+PDYV+G+++CAL+LSI+YH L PDY+
Sbjct: 13 SQSRNAILVSRRQQGNPVLKFIRNVRWTFDD-IVPDYVLGQSSCALYLSIRYHLLHPDYL 71
Query: 125 ADRIKALGKLYKLQV-------DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIET 177
RI+ L K ++L+V D P H +T+ LL D +L+ AWS EE +ET
Sbjct: 72 YFRIRELQKNFRLRVVLCYVDEDVIKPLHE---VTKTALLHDCSLLCAWSLEECARYLET 128
Query: 178 YKVFENKPPDLIMEKQDVDPHSK 200
K++ENKP D I E+ D D S+
Sbjct: 129 IKMYENKPADNIQERTDQDYLSR 151
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+ AWS EE +ET K++ENKP D I E+ D D S+
Sbjct: 114 LCAWSLEECARYLETIKMYENKPADNIQERTDQDYLSR 151
>gi|392562583|gb|EIW55763.1| hypothetical protein TRAVEDRAFT_171645 [Trametes versicolor
FP-101664 SS1]
Length = 377
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 94/138 (68%), Gaps = 6/138 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S N I++NP Q+GNP+L+ + V E+ + I+ DY +G+TT LFLS++YH L P+YI
Sbjct: 23 SGNNIIINPCQRGNPILESVRNVGKEFGE-ILADYQVGKTTGVLFLSLRYHRLHPEYIHQ 81
Query: 127 RIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RI+ LG Y L+V D + ++ LT++CL+ ++T+M+AW+PEEAG + TYK F
Sbjct: 82 RIEKLGHSYNLRVLLLMCDVSEHQDPIRELTKICLINEMTIMVAWNPEEAGYYLATYKQF 141
Query: 182 ENKPPDLIMEKQDVDPHS 199
E++PPDLI E+ D D S
Sbjct: 142 EHRPPDLIKERVDKDYRS 159
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHS 37
M+AW+PEEAG + TYK FE++PPDLI E+ D D S
Sbjct: 123 MVAWNPEEAGYYLATYKQFEHRPPDLIKERVDKDYRS 159
>gi|255542562|ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
communis]
gi|223548305|gb|EEF49796.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
communis]
Length = 392
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 104/161 (64%), Gaps = 9/161 (5%)
Query: 48 AQNSATSESV-QPSRAGASKSS--NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMG 104
A + T++SV PS++ A + N+ILV+ RQKGNPLLKHI V W + D ++ DY++G
Sbjct: 77 ANSIQTTQSVPSPSQSVALTGNYRNSILVSHRQKGNPLLKHIRNVRWAFAD-VVCDYLLG 135
Query: 105 RTTCALFLSIKYHALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCD 159
+ C+L+LS++YH L PDY+ RI+ L K YKL+V D +D L +T+ LL D
Sbjct: 136 QNCCSLYLSLRYHLLHPDYLYYRIRELQKNYKLRVVLCHVDVEDVVKPLLEVTKTALLHD 195
Query: 160 LTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
TL+ AWS EE G +ET K++ENKP DLI + D D S+
Sbjct: 196 CTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYLSR 236
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+ AWS EE G +ET K++ENKP DLI + D D S+
Sbjct: 199 LCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYLSR 236
>gi|70994842|ref|XP_752198.1| mating-type switch/DNA repair protein Swi10/Rad10 [Aspergillus
fumigatus Af293]
gi|66849832|gb|EAL90160.1| mating-type switch/DNA repair protein Swi10/Rad10, putative
[Aspergillus fumigatus Af293]
gi|159124889|gb|EDP50006.1| mating-type switch/DNA repair protein Swi10/Rad10, putative
[Aspergillus fumigatus A1163]
Length = 341
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 99/156 (63%), Gaps = 13/156 (8%)
Query: 50 NSATSESVQPS------RAGASKSS-NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYV 102
NSAT++S P +A A+++ +AILV+ RQKGNP+L HI +PWEY D I DYV
Sbjct: 31 NSATAQSTAPKVQQPKPQALANRTGPSAILVSTRQKGNPILNHIKLLPWEYAD-IPADYV 89
Query: 103 MGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLL 157
+G TTCALFLS+KYH L P+YI RIKALG Y L+ VD ++ +LK L++ ++
Sbjct: 90 VGATTCALFLSLKYHRLHPEYIYSRIKALGGKYMLRIILVMVDIENHEDSLKELSKTSII 149
Query: 158 CDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
+ TLML WS EA +E YK EN P I +Q
Sbjct: 150 NNYTLMLCWSAPEAAHYLELYKSSENAQPTAIRTQQ 185
>gi|326469985|gb|EGD93994.1| mating-type switch/DNA repair protein Swi10/Rad10 [Trichophyton
tonsurans CBS 112818]
Length = 348
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 92/140 (65%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
P+R G S +ILV+ RQKGNP+L+HI PWEY D I DYVMG T+CALFLS+KYH
Sbjct: 57 PARRGPS----SILVSSRQKGNPILQHIRLTPWEYAD-IPADYVMGTTSCALFLSLKYHR 111
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RIKALG ++L+ VD + +LK L++ CL+ +LT++L WS EA
Sbjct: 112 LHPEYIYTRIKALGGKFRLRILLTMVDIPNHEDSLKELSKTCLINNLTVILCWSASEAAH 171
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K+ E+ P I +Q
Sbjct: 172 YLELFKLSEHAQPTAIRSRQ 191
>gi|451848127|gb|EMD61433.1| hypothetical protein COCSADRAFT_39164 [Cochliobolus sativus ND90Pr]
Length = 381
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 92/140 (65%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+ S +ILV+PRQKGNP+L ++ V WEY D I PDYV+G TTCALFLS+KYH
Sbjct: 51 PSRSAPS----SILVSPRQKGNPILNNVRAVAWEYSD-IAPDYVVGATTCALFLSLKYHR 105
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI +RI+ L Y L+ VD ++ L+ L++ L+ ++T+ML WS +EAG
Sbjct: 106 LHPEYIYNRIRDLKGQYTLRILLTMVDIENHEDPLRELSKTSLVNNVTVMLCWSAQEAGR 165
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K FEN P I +Q
Sbjct: 166 YLELFKTFENAAPTSIRAQQ 185
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQN 50
ML WS +EAG +E +K FEN P I +Q +F VP + N
Sbjct: 155 MLCWSAQEAGRYLELFKTFENAAPTSIRAQQAGSYAENMVDFITVPRSIN 204
>gi|303316412|ref|XP_003068208.1| DNA repair protein rad10 containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107889|gb|EER26063.1| DNA repair protein rad10 containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037954|gb|EFW19890.1| mating-type switching protein swi10 [Coccidioides posadasii str.
Silveira]
Length = 356
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 90/138 (65%), Gaps = 9/138 (6%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
+ +AILV+ RQKGNP+L H+ +PWEY D I DYV+G TTCALFLS+KYH L P+Y+
Sbjct: 54 ARSAILVSARQKGNPILNHVRLLPWEYAD-IPADYVLGATTCALFLSLKYHRLHPEYVYS 112
Query: 127 RIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RIK LG Y L+ VD + +LK L++ ++ +LTL+L WS EAG +E +K
Sbjct: 113 RIKLLGGKYDLRILLIMVDVPNHEDSLKELSKASVVNNLTLILCWSAAEAGHYLELFKSS 172
Query: 182 ENKPPDLIMEKQDVDPHS 199
EN PP I +Q PHS
Sbjct: 173 ENAPPTAIRSQQ---PHS 187
>gi|258568358|ref|XP_002584923.1| mating-type switching protein swi10 [Uncinocarpus reesii 1704]
gi|237906369|gb|EEP80770.1| mating-type switching protein swi10 [Uncinocarpus reesii 1704]
Length = 360
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 91/142 (64%), Gaps = 10/142 (7%)
Query: 57 VQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKY 116
V P+R+ S AILV+ RQKGNP+L H+ +PWEY D I DYV+G TTCALFLS+KY
Sbjct: 48 VIPNRSARS----AILVSSRQKGNPILNHVRLLPWEYAD-IPADYVLGATTCALFLSLKY 102
Query: 117 HALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEA 171
H L P+Y+ RIK LG Y L+ VD + +LK L++ ++ +LTL+L WS EA
Sbjct: 103 HRLHPEYVYSRIKLLGAKYTLRILLIMVDVPNHEDSLKELSKTSIVNNLTLILCWSAAEA 162
Query: 172 GEMIETYKVFENKPPDLIMEKQ 193
G +E +K EN PP I +Q
Sbjct: 163 GHYLELFKSSENAPPTAIRSQQ 184
>gi|451999235|gb|EMD91698.1| hypothetical protein COCHEDRAFT_1175927 [Cochliobolus
heterostrophus C5]
Length = 381
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 92/140 (65%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+ S +ILV+PRQKGNP+L ++ V WEY D I PDYV+G TTCALFLS+KYH
Sbjct: 51 PSRSAPS----SILVSPRQKGNPILNNVRAVAWEYSD-IAPDYVVGATTCALFLSLKYHR 105
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI +RI+ L Y L+ VD ++ L+ L++ L+ ++T+ML WS +EAG
Sbjct: 106 LHPEYIYNRIRDLKGQYTLRILLTMVDIENHEDPLRELSKTSLVNNVTVMLCWSAQEAGR 165
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K FEN P I +Q
Sbjct: 166 YLELFKTFENAAPTSIRAQQ 185
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQN 50
ML WS +EAG +E +K FEN P I +Q +F VP + N
Sbjct: 155 MLCWSAQEAGRYLELFKTFENAAPTSIRAQQAGSYAENMVDFITVPRSIN 204
>gi|119188301|ref|XP_001244757.1| hypothetical protein CIMG_04198 [Coccidioides immitis RS]
gi|392871469|gb|EAS33386.2| DNA repair protein rad10 [Coccidioides immitis RS]
Length = 355
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 90/138 (65%), Gaps = 9/138 (6%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
+ +AILV+ RQKGNP+L H+ +PWEY D I DYV+G TTCALFLS+KYH L P+Y+
Sbjct: 53 ARSAILVSARQKGNPILNHVRLLPWEYAD-IPADYVLGATTCALFLSLKYHRLHPEYVYS 111
Query: 127 RIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RIK LG Y L+ VD + +LK L++ ++ +LTL+L WS EAG +E +K
Sbjct: 112 RIKLLGGKYDLRILLIMVDVPNHEDSLKELSKASVVNNLTLILCWSAAEAGHYLELFKSS 171
Query: 182 ENKPPDLIMEKQDVDPHS 199
EN PP I +Q PHS
Sbjct: 172 ENAPPTAIRSQQ---PHS 186
>gi|119501268|ref|XP_001267391.1| mating-type switch/DNA repair protein Swi10/Rad10, putative
[Neosartorya fischeri NRRL 181]
gi|119415556|gb|EAW25494.1| mating-type switch/DNA repair protein Swi10/Rad10, putative
[Neosartorya fischeri NRRL 181]
Length = 341
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 100/179 (55%), Gaps = 6/179 (3%)
Query: 20 ENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKG 79
+N PD + ++ P + +P A + + +P +AILV+ RQKG
Sbjct: 8 DNADPDYGLPERSATPRAARDTSNPATAQSTAPKVQQPKPQALANRTGPSAILVSTRQKG 67
Query: 80 NPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ- 138
NP+L HI +PWEY D I DYV+G T CALFLS+KYH L P+YI RIKALG Y L+
Sbjct: 68 NPILNHIKLLPWEYAD-IPADYVVGATACALFLSLKYHRLHPEYIYSRIKALGGKYMLRI 126
Query: 139 ----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
VD ++ +LK L++ ++ + TLML WS EA +E YK EN P I +Q
Sbjct: 127 ILVMVDIENHEDSLKELSKTSIINNYTLMLCWSAPEAAHYLELYKSSENAQPTAIRTQQ 185
>gi|330930989|ref|XP_003303225.1| hypothetical protein PTT_15356 [Pyrenophora teres f. teres 0-1]
gi|330938316|ref|XP_003305727.1| hypothetical protein PTT_18642 [Pyrenophora teres f. teres 0-1]
gi|311317153|gb|EFQ86194.1| hypothetical protein PTT_18642 [Pyrenophora teres f. teres 0-1]
gi|311320892|gb|EFQ88672.1| hypothetical protein PTT_15356 [Pyrenophora teres f. teres 0-1]
Length = 361
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 93/140 (66%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+G S AILV+PRQKGNP+L ++ V WEY D I DYV+G TTCALFLS+KYH
Sbjct: 44 PSRSGPS----AILVSPRQKGNPILNNVRSVAWEYSD-IPADYVVGATTCALFLSLKYHR 98
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI +RI+ L Y L+ VD ++ L+ L+++ L+ ++T+ML WS +EAG
Sbjct: 99 LHPEYIYNRIRDLKGQYNLRILLTMVDIENHEDPLRELSKMSLVNNVTVMLCWSAQEAGR 158
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K FEN P I +Q
Sbjct: 159 YLELFKTFENAAPTSIRAQQ 178
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQN 50
ML WS +EAG +E +K FEN P I +Q +F VP + N
Sbjct: 148 MLCWSAQEAGRYLELFKTFENAAPTSIRAQQARTYAENMVDFITVPRSIN 197
>gi|326484108|gb|EGE08118.1| mating-type switching protein swi10 [Trichophyton equinum CBS
127.97]
Length = 349
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 91/140 (65%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
P+R G S +ILV+ RQKGNP+L+HI PWEY D I DYVMG T+CALFLS+KYH
Sbjct: 57 PARRGPS----SILVSSRQKGNPILQHIRLTPWEYAD-IPADYVMGTTSCALFLSLKYHR 111
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RIKALG ++L+ VD + +LK L++ CL+ +LT++L WS EA
Sbjct: 112 LHPEYIYTRIKALGGKFRLRILLTMVDIPNHEDSLKELSKTCLINNLTIILCWSASEAAH 171
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K E+ P I +Q
Sbjct: 172 YLELFKSSEHAQPTAIRSRQ 191
>gi|407926360|gb|EKG19327.1| DNA repair protein rad10 [Macrophomina phaseolina MS6]
Length = 369
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 94/151 (62%), Gaps = 10/151 (6%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
P+R+G + +ILV+PRQKGNP+L + VPWEY D I DYV+G TTCALFLS+KYH
Sbjct: 20 PARSGPA----SILVSPRQKGNPILNSVRNVPWEYSD-IPADYVLGATTCALFLSLKYHR 74
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RI+AL Y L+ VD + ALK L++ L+ ++TL+L WS +EAG
Sbjct: 75 LHPEYIYSRIRALAGKYNLRILLTMVDIDNHEEALKELSKTSLINNVTLILCWSAQEAGR 134
Query: 174 MIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
+E +K +E+ P I Q + K F
Sbjct: 135 YLELFKTYEHAAPTSIRAPQASNYSEKMVEF 165
>gi|189189600|ref|XP_001931139.1| mating-type switching protein swi10 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972745|gb|EDU40244.1| mating-type switching protein swi10 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 364
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 93/140 (66%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+G S +ILV+PRQKGNP+L ++ V WEY D I DYV+G TTCALFLS+KYH
Sbjct: 47 PSRSGPS----SILVSPRQKGNPILNNVRSVAWEYSD-IPADYVVGATTCALFLSLKYHR 101
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI +RI+ L Y L+ VD ++ L+ L+++ L+ ++T+ML WS +EAG
Sbjct: 102 LHPEYIYNRIRDLKGQYNLRILLTMVDIENHEDPLRELSKMSLVNNVTVMLCWSAQEAGR 161
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K FEN P I +Q
Sbjct: 162 YLELFKTFENAAPTSIRAQQ 181
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQN 50
ML WS +EAG +E +K FEN P I +Q K +F VP + N
Sbjct: 151 MLCWSAQEAGRYLELFKTFENAAPTSIRAQQAGTYPEKMVDFITVPRSIN 200
>gi|384246919|gb|EIE20407.1| DNA repair protein rad10, partial [Coccomyxa subellipsoidea C-169]
Length = 219
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 88/137 (64%), Gaps = 6/137 (4%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
NA+LV+ RQ+GNP+LKHI V W++ D I+PDY MG TCALFLS++YH LKP YI RI
Sbjct: 1 NAVLVSKRQEGNPVLKHIRNVRWQFTD-IVPDYQMGPNTCALFLSLRYHLLKPTYIYGRI 59
Query: 129 KALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
K L + ++ + VD D L +T+ LL D TL+ AWS EE +ETYK +E+
Sbjct: 60 KELQRAFRTRVLLCHVDVDDVVEPLAQVTKAALLNDCTLICAWSHEECARYLETYKAYES 119
Query: 184 KPPDLIMEKQDVDPHSK 200
KP D I + + D SK
Sbjct: 120 KPADAIQGRTEEDYLSK 136
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+ AWS EE +ETYK +E+KP D I + + D SK
Sbjct: 99 ICAWSHEECARYLETYKAYESKPADAIQGRTEEDYLSK 136
>gi|164660744|ref|XP_001731495.1| hypothetical protein MGL_1678 [Malassezia globosa CBS 7966]
gi|159105395|gb|EDP44281.1| hypothetical protein MGL_1678 [Malassezia globosa CBS 7966]
Length = 284
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 92/141 (65%), Gaps = 7/141 (4%)
Query: 58 QPSR-AGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKY 116
QP R ++SS++ILVN Q+GNP+L+HI V WEY D I+PDY +G + LFLS++Y
Sbjct: 15 QPHRLIRGAQSSSSILVNSCQRGNPVLQHIKGVAWEYAD-IVPDYQVGISNGVLFLSLRY 73
Query: 117 HALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEA 171
H L P+YI RI+ L +Y L++ D D A++ LT+V L+ + +++AWS EEA
Sbjct: 74 HRLHPEYIHMRIQRLAHMYTLRILLVVCDVNDHQPAIRELTKVALVNQIVMIVAWSAEEA 133
Query: 172 GEMIETYKVFENKPPDLIMEK 192
+E YK FE KPPD+I K
Sbjct: 134 AHYLEIYKAFEQKPPDMIRAK 154
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEK 30
++AWS EEA +E YK FE KPPD+I K
Sbjct: 125 IVAWSAEEAAHYLEIYKAFEQKPPDMIRAK 154
>gi|356533598|ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
Length = 398
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 102/168 (60%), Gaps = 19/168 (11%)
Query: 47 AAQNSATSESVQPSRAGASKSS--------NAILVNPRQ-----KGNPLLKHIGKVPWEY 93
Q+ A S + PS A A+ SS N+ILV+ RQ KGNPLLKHI V W +
Sbjct: 71 TGQSDAPSSTSTPSPATAAASSTIPSSQNRNSILVSHRQCIILQKGNPLLKHIRNVRWAF 130
Query: 94 DDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQV-----DSKDPHHAL 148
D ++ DY++G+++CAL+LS++YH L PDY+ RI+ L K +KL+V D +D L
Sbjct: 131 AD-VVCDYMLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVIKPL 189
Query: 149 KYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 196
+T+ +L D TL+ WS EE G +ET KV+ENKP D+I + D D
Sbjct: 190 LEVTKTAMLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTD 237
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+ WS EE G +ET KV+ENKP D+I + D D
Sbjct: 204 LCGWSLEECGRYLETIKVYENKPADIIQGQMDTD 237
>gi|396463188|ref|XP_003836205.1| hypothetical protein LEMA_P055460.1 [Leptosphaeria maculans JN3]
gi|312212757|emb|CBX92840.1| hypothetical protein LEMA_P055460.1 [Leptosphaeria maculans JN3]
Length = 796
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 94/151 (62%), Gaps = 10/151 (6%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+G S +ILV+PRQKGNP+L ++ V WEY D I DYV+G TTCALFLS+KYH
Sbjct: 33 PSRSGPS----SILVSPRQKGNPILNNVRAVAWEYSD-IPADYVVGATTCALFLSLKYHR 87
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI +RI+ L Y L+ VD ++ L+ L++ ++ ++T+ML WS EAG
Sbjct: 88 LHPEYIYNRIRDLKGQYSLRILLTMVDIENHEEPLRELSKTSIVNNVTVMLCWSANEAGR 147
Query: 174 MIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
+E +K+FEN P I Q K +F
Sbjct: 148 YLEQFKIFENAAPTSIRAHQSGSYAEKMVDF 178
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQN 50
ML WS EAG +E +K+FEN P I Q K +F P + N
Sbjct: 137 MLCWSANEAGRYLEQFKIFENAAPTSIRAHQSGSYAEKMVDFITAPRSIN 186
>gi|296827780|ref|XP_002851223.1| mating-type switching protein swi10 [Arthroderma otae CBS 113480]
gi|238838777|gb|EEQ28439.1| mating-type switching protein swi10 [Arthroderma otae CBS 113480]
Length = 323
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 95/155 (61%), Gaps = 10/155 (6%)
Query: 44 PVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVM 103
P PA + P+R G S +ILV+PRQKGNP+L HI PWEY D I DY++
Sbjct: 33 PEPAPRVQQPKPQALPARRGPS----SILVSPRQKGNPILHHIRLTPWEYAD-IPADYLV 87
Query: 104 GRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLC 158
G T+CALFLS+KYH L P+YI RIKALG ++L+ VD + +LK L++ CL+
Sbjct: 88 GTTSCALFLSLKYHRLHPEYIYTRIKALGGKFRLRILLTMVDIPNHEDSLKELSKTCLVN 147
Query: 159 DLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
+LT++L WS EA +E +K E+ P I KQ
Sbjct: 148 NLTIILCWSAPEAAHYLELFKSSEHAQPTAIKSKQ 182
>gi|327301711|ref|XP_003235548.1| mating-type switching protein swi10 [Trichophyton rubrum CBS
118892]
gi|326462900|gb|EGD88353.1| mating-type switching protein swi10 [Trichophyton rubrum CBS
118892]
Length = 351
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 91/140 (65%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
P+R G S +ILV+ RQKGNP+L+HI PWEY D I DYV+G T+CALFLS+KYH
Sbjct: 57 PARQGPS----SILVSSRQKGNPILQHIRLTPWEYAD-IPADYVVGTTSCALFLSLKYHR 111
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RIKALG ++L+ VD + +LK L++ CL+ +LT++L WS EA
Sbjct: 112 LHPEYIYTRIKALGGKFRLRILLTMVDIPNHEDSLKELSKTCLINNLTIILCWSAPEAAH 171
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K E+ P I +Q
Sbjct: 172 YLELFKSSEHAQPTAIRSRQ 191
>gi|302498320|ref|XP_003011158.1| hypothetical protein ARB_02680 [Arthroderma benhamiae CBS 112371]
gi|291174706|gb|EFE30518.1| hypothetical protein ARB_02680 [Arthroderma benhamiae CBS 112371]
Length = 349
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 96/156 (61%), Gaps = 10/156 (6%)
Query: 43 DPVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYV 102
+P P A+ P+R G S +ILV+ RQKGNP+L+HI PWEY D I DY+
Sbjct: 41 EPAPKAKVQQPKPQALPARRGPS----SILVSSRQKGNPILQHIRLTPWEYAD-IPADYL 95
Query: 103 MGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLL 157
+G T+CALFLS+KYH L P+YI RIKALG ++L+ VD + +LK L++ CL+
Sbjct: 96 VGNTSCALFLSLKYHRLHPEYIYTRIKALGGKFRLRILLTVVDIPNHEDSLKELSKTCLI 155
Query: 158 CDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
+LT++L WS EA +E +K E+ P I +Q
Sbjct: 156 NNLTIILCWSAPEAAHYLELFKSSEHAQPTAIRSRQ 191
>gi|121706514|ref|XP_001271519.1| mating-type switch/DNA repair protein Swi10/Rad10, putative
[Aspergillus clavatus NRRL 1]
gi|119399667|gb|EAW10093.1| mating-type switch/DNA repair protein Swi10/Rad10, putative
[Aspergillus clavatus NRRL 1]
Length = 336
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 89/142 (62%), Gaps = 10/142 (7%)
Query: 57 VQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKY 116
V +R+G S AILV+ RQKGNP+L HI +PWEY D I DYV+G TTCALFLS+KY
Sbjct: 50 VLANRSGPS----AILVSSRQKGNPILNHIKLLPWEYAD-IPADYVLGATTCALFLSLKY 104
Query: 117 HALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEA 171
H L P+YI RIKAL Y L+ VD + +LK L++ ++ +LTLML WS EA
Sbjct: 105 HRLHPEYIYSRIKALAGKYMLRILLIIVDIPNHEDSLKELSKTSIINNLTLMLCWSATEA 164
Query: 172 GEMIETYKVFENKPPDLIMEKQ 193
+E +K EN P I +Q
Sbjct: 165 AHYLELFKASENAQPTAIRTQQ 186
>gi|302657507|ref|XP_003020474.1| hypothetical protein TRV_05441 [Trichophyton verrucosum HKI 0517]
gi|291184311|gb|EFE39856.1| hypothetical protein TRV_05441 [Trichophyton verrucosum HKI 0517]
Length = 349
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 91/140 (65%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
P+R G S +ILV+ RQKGNP+L+HI PWEY D I DY++G T+CALFLS+KYH
Sbjct: 57 PARRGPS----SILVSSRQKGNPILQHIRLTPWEYAD-IPADYLVGTTSCALFLSLKYHR 111
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RIKALG ++L+ VD + +LK L++ CL+ +LT++L WS EA
Sbjct: 112 LHPEYIYTRIKALGGKFRLRILLTIVDIPNHEDSLKELSKTCLINNLTIILCWSAPEAAH 171
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K E+ P I +Q
Sbjct: 172 YLELFKSSEHAQPTAIRSRQ 191
>gi|339243053|ref|XP_003377452.1| DNA excision repair protein ERCC-1 [Trichinella spiralis]
gi|316973744|gb|EFV57303.1| DNA excision repair protein ERCC-1 [Trichinella spiralis]
Length = 340
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIK 129
+++VN RQKGN +L+++ V WE+ ++ D+V+G+ CALFLS+K+H + P YI R+K
Sbjct: 121 SVIVNHRQKGNSVLRYVRNVVWEFGETK-ADFVLGQCCCALFLSLKFHKVHPTYIHQRMK 179
Query: 130 ALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
+G Y +QV D +P + L+ L VC + TL+L WSPEE GE IE+YK++ENK
Sbjct: 180 EVGHKYAVQVLFVLVDVMEPENTLRELNSVCYHAEWTLILTWSPEEVGEYIESYKIYENK 239
Query: 185 PPDLIMEK 192
P + +M K
Sbjct: 240 PAEFLMTK 247
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEK 30
+L WSPEE GE IE+YK++ENKP + +M K
Sbjct: 218 ILTWSPEEVGEYIESYKIYENKPAEFLMTK 247
>gi|398410916|ref|XP_003856805.1| hypothetical protein MYCGRDRAFT_24762, partial [Zymoseptoria
tritici IPO323]
gi|339476690|gb|EGP91781.1| hypothetical protein MYCGRDRAFT_24762 [Zymoseptoria tritici IPO323]
Length = 293
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 98/173 (56%), Gaps = 19/173 (10%)
Query: 37 SKTWNFDPVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS 96
+KT P P A P R G + AI+V+PRQKGNP+L+ I +PWEY D
Sbjct: 8 TKTGVVQPTPQAL---------PRRTGPA----AIIVSPRQKGNPVLERIKSMPWEYGD- 53
Query: 97 IIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYL 151
I DYV+G TTCALFLS+KYH L P+YI RIKAL + L+ VD ++ LK L
Sbjct: 54 IAADYVLGVTTCALFLSLKYHRLHPEYIYTRIKALQGKFALRIILCMVDIQNHEETLKEL 113
Query: 152 TRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
++ ++ ++T++L WS E G +E +K +EN P I + Q + +F
Sbjct: 114 SKTSVINNVTVILCWSAAEGGRYLELFKTYENAAPTSIKQHQSTTYSDRLIDF 166
>gi|212528570|ref|XP_002144442.1| mating-type switch/DNA repair protein Swi10/Rad10, putative
[Talaromyces marneffei ATCC 18224]
gi|210073840|gb|EEA27927.1| mating-type switch/DNA repair protein Swi10/Rad10, putative
[Talaromyces marneffei ATCC 18224]
Length = 323
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
P+RAG S AILV+ RQKGNP+L H+ VPWEY D I DYV+G TTCALFLS+KYH
Sbjct: 31 PNRAGPS----AILVSSRQKGNPILNHVKLVPWEYAD-IPADYVLGATTCALFLSLKYHR 85
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RI+ L Y L+ VD + LK L++ ++ ++TL+L WS EA
Sbjct: 86 LHPEYIYSRIRLLAGKYNLRIVLVMVDIPNHEETLKELSKTSIVNNVTLILCWSAPEAAH 145
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E YK EN P I +Q
Sbjct: 146 YLELYKSSENAQPTAIRSQQ 165
>gi|170117319|ref|XP_001889847.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635187|gb|EDQ99498.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 209
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 95/138 (68%), Gaps = 6/138 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S N I+++P Q+GN +L+ I V E+ D I+ DY +GRTT LFLS++YH L P+YI
Sbjct: 8 SGNNIIISPLQRGNQVLQCIRNVGQEFGD-IVADYQVGRTTGVLFLSLRYHRLHPEYIHA 66
Query: 127 RIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RI+ LG+ Y L++ D + +++ LT+VCL+ ++T+++++S +EAG + T+K F
Sbjct: 67 RIERLGRSYNLRILLILCDITEHRDSIRELTKVCLINNVTVIVSFSFDEAGHYLSTFKQF 126
Query: 182 ENKPPDLIMEKQDVDPHS 199
E+KPPDLI E+ D D HS
Sbjct: 127 EHKPPDLIKERVDKDYHS 144
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS 60
++++S +EAG + T+K FE+KPPDLI E+ D D HS N E+++ S
Sbjct: 108 IVSFSFDEAGHYLSTFKQFEHKPPDLIKERVDKDYHSTLRTTLTSIGKVNKTDVETLRTS 167
Query: 61 RAGASKSSNA 70
+ S A
Sbjct: 168 FGSFADISRA 177
>gi|452847356|gb|EME49288.1| hypothetical protein DOTSEDRAFT_84711 [Dothistroma septosporum
NZE10]
Length = 364
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 99/170 (58%), Gaps = 8/170 (4%)
Query: 42 FDPVPAAQNSATSESVQPSRAGASKSSN--AILVNPRQKGNPLLKHIGKVPWEYDDSIIP 99
+DP A + + VQP +K S +I+V+PRQKGNP+L I +PWEY D I
Sbjct: 9 YDPESGASGPSKTGVVQPKPQALAKRSGPASIIVSPRQKGNPVLDKIKSMPWEYGD-IPA 67
Query: 100 DYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRV 154
DY++G TTC LFLS+KYH L P+YI +RIKAL Y L+ VD ++ +LK L++
Sbjct: 68 DYILGLTTCCLFLSLKYHRLHPEYIYNRIKALQGKYALRIVLCMVDIQNHEESLKELSKT 127
Query: 155 CLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
++ ++T++L WS E +E +K +EN P I + Q + +F
Sbjct: 128 SVINNVTIVLCWSAAEGARYLELFKTYENAAPTSIKQHQSTAYSDRMVDF 177
>gi|168034367|ref|XP_001769684.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679033|gb|EDQ65485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 285
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 50 NSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCA 109
N S S + S++ NAILVN RQ GNP+LK+I V W + D I+PDY++G++TCA
Sbjct: 68 NGVGSRSQEALPTVNSQARNAILVNRRQTGNPVLKYIRNVRWVFGD-IVPDYLLGQSTCA 126
Query: 110 LFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLML 164
L++S++YH L PDY+ RI+ L K ++L+ VD +D L + + LL D +L+
Sbjct: 127 LYISLRYHLLHPDYLYFRIRELQKGFRLRVVLCHVDLEDVIKPLHEVIKTSLLHDCSLLC 186
Query: 165 AWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
AWS EE +ET K +E+KP D I E+ D D S+
Sbjct: 187 AWSLEECARYLETLKTYEHKPADNIQERTDNDYISR 222
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+ AWS EE +ET K +E+KP D I E+ D D S+
Sbjct: 185 LCAWSLEECARYLETLKTYEHKPADNIQERTDNDYISR 222
>gi|168034363|ref|XP_001769682.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679031|gb|EDQ65483.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 50 NSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCA 109
N S S + S++ NAILVN RQ GNP+LK+I V W + D I+PDY++G++TCA
Sbjct: 62 NGVGSRSQEALPTVNSQARNAILVNRRQTGNPVLKYIRNVRWVFGD-IVPDYLLGQSTCA 120
Query: 110 LFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLML 164
L++S++YH L PDY+ RI+ L K ++L+ VD +D L + + LL D +L+
Sbjct: 121 LYISLRYHLLHPDYLYFRIRELQKGFRLRVVLCHVDLEDVIKPLHEVIKTSLLHDCSLLC 180
Query: 165 AWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
AWS EE +ET K +E+KP D I E+ D D S+
Sbjct: 181 AWSLEECARYLETLKTYEHKPADNIQERTDNDYISR 216
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+ AWS EE +ET K +E+KP D I E+ D D S+
Sbjct: 179 LCAWSLEECARYLETLKTYEHKPADNIQERTDNDYISR 216
>gi|361131533|gb|EHL03206.1| putative Mating-type switching protein swi10 [Glarea lozoyensis
74030]
Length = 387
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 100/155 (64%), Gaps = 8/155 (5%)
Query: 42 FDPVPAAQNSATSESVQPS-RAGASKSS-NAILVNPRQKGNPLLKHIGKVPWEYDDSIIP 99
D P A N++ + VQP+ +A ASKS+ ++ILV+ RQKGNP+L ++ WEY D I+
Sbjct: 49 LDRAPPAPNTSGPKVVQPTPQAIASKSTGSSILVSTRQKGNPILTNLRSFAWEYSD-ILA 107
Query: 100 DYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRV 154
DYV+G TTCALFLS+KYH L P+YI +RIK L + L+ VD + +LK L++
Sbjct: 108 DYVLGLTTCALFLSLKYHRLHPEYIYNRIKGLQGKFNLRILLTMVDITNHEESLKELSKS 167
Query: 155 CLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLI 189
++ ++T++L WS EA +E YK FE+ P I
Sbjct: 168 SMINNVTVILCWSAAEAARYLELYKSFEHAKPSAI 202
>gi|345561961|gb|EGX45033.1| hypothetical protein AOL_s00173g134 [Arthrobotrys oligospora ATCC
24927]
Length = 370
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 87/143 (60%), Gaps = 6/143 (4%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
P + + ++I+ N RQKGNPLL +I PWEY D I DY+ T LFLS+KYH
Sbjct: 49 PRKIQKATGPSSIVANTRQKGNPLLPYIKNTPWEYGD-IPADYLPNPRTAMLFLSLKYHR 107
Query: 119 LKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RIK+LG+ Y L+V D++ LK LT+ ++ LT+MLAWSP EAG
Sbjct: 108 LHPEYIYTRIKSLGQAYTLRVVLVLVDTEQHSDPLKELTKAGIIHSLTIMLAWSPAEAGR 167
Query: 174 MIETYKVFENKPPDLIMEKQDVD 196
+E YK EN P +I E+Q D
Sbjct: 168 YVELYKALENTPATMIKERQKED 190
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
MLAWSP EAG +E YK EN P +I E+Q D
Sbjct: 157 MLAWSPAEAGRYVELYKALENTPATMIKERQKED 190
>gi|299751189|ref|XP_001830113.2| DNA excision repair protein ERCC-1 [Coprinopsis cinerea
okayama7#130]
gi|298409261|gb|EAU91778.2| DNA excision repair protein ERCC-1 [Coprinopsis cinerea
okayama7#130]
Length = 356
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 103/168 (61%), Gaps = 11/168 (6%)
Query: 42 FDPVPAAQNSATSESVQPSRAGAS-----KSSNAILVNPRQKGNPLLKHIGKVPWEYDDS 96
F P + S + S +++GA S N I++NP Q+GNP+L+ I V E+ D
Sbjct: 17 FAPFFGSMTSRPATSSSAAKSGAPPVVIPASGNNIIINPLQRGNPVLECIRNVGKEFGD- 75
Query: 97 IIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYL 151
I+ DY +GRTT L+LS+KYH L P+YI RI+ LG Y L++ D + ++ L
Sbjct: 76 IVADYQVGRTTGVLWLSLKYHRLHPEYIHTRIEKLGNSYGLRLLLILCDVTEHKEHIREL 135
Query: 152 TRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHS 199
TRVCL+ ++T+++A+S +EAG + T+K FE K PD+I E+ + D HS
Sbjct: 136 TRVCLINNITIIVAFSLDEAGHYLSTFKQFEFKSPDMIKERTEKDHHS 183
Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHS 37
++A+S +EAG + T+K FE K PD+I E+ + D HS
Sbjct: 147 IVAFSLDEAGHYLSTFKQFEFKSPDMIKERTEKDHHS 183
>gi|392593609|gb|EIW82934.1| hypothetical protein CONPUDRAFT_143024 [Coniophora puteana
RWD-64-598 SS2]
Length = 379
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 92/135 (68%), Gaps = 6/135 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S N I++NP Q+ NPLL+ I V ++ + I+PD+ +GRTTC L+LS+KYH L P+YI
Sbjct: 18 SGNNIIINPNQRLNPLLECIRNVGKQFGE-IVPDFQVGRTTCVLYLSLKYHRLHPEYIHA 76
Query: 127 RIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RI+ LG + L++ D + ++ LT+ CL+ ++T+++AWS +EAG + T+K F
Sbjct: 77 RIEKLGHAFNLRILLIMCDVSEHQDPIRELTKTCLINNITIIVAWSLDEAGHYLSTFKQF 136
Query: 182 ENKPPDLIMEKQDVD 196
E+KPPDLI E+ + D
Sbjct: 137 EHKPPDLIKERAEKD 151
Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
++AWS +EAG + T+K FE+KPPDLI E+ + D
Sbjct: 118 IVAWSLDEAGHYLSTFKQFEHKPPDLIKERAEKD 151
>gi|315056865|ref|XP_003177807.1| mating-type switching protein swi10 [Arthroderma gypseum CBS
118893]
gi|311339653|gb|EFQ98855.1| mating-type switching protein swi10 [Arthroderma gypseum CBS
118893]
Length = 331
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 96/162 (59%), Gaps = 10/162 (6%)
Query: 37 SKTWNFDPVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS 96
S+ +P P A+ P+R G S +ILV+ RQKGNP+L HI PWEY D
Sbjct: 29 SRQQQPEPEPKAKIQQPKPQALPARRGPS----SILVSSRQKGNPILHHIRLTPWEYAD- 83
Query: 97 IIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYL 151
I DY++G T+CALFLS+KYH L P+YI RIKALG ++L+ VD + +LK L
Sbjct: 84 IPADYLVGTTSCALFLSLKYHRLHPEYIYTRIKALGGKFRLRILLTMVDIPNHEDSLKEL 143
Query: 152 TRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
++ CL+ +LT++L WS E +E +K E+ P I +Q
Sbjct: 144 SKTCLINNLTIILCWSAPEVAHYLELFKSSEHAQPTAIRSRQ 185
>gi|255949672|ref|XP_002565603.1| Pc22g16900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592620|emb|CAP98978.1| Pc22g16900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 328
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 43 DPVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYV 102
P P A + + + +P ++AILV+ RQKGNP+L HI +PWEY D I DYV
Sbjct: 17 SPAPGASSRSKVQQPKPQTLVNRPGTSAILVSTRQKGNPILTHIKLLPWEYAD-IPADYV 75
Query: 103 MGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLL 157
+G TTCA+FLS+KYH L P+YI R+K L Y L+ VD + +L+ L++ ++
Sbjct: 76 VGTTTCAMFLSLKYHRLHPEYIYSRVKQLAGKYNLRLVLVMVDIPNHEDSLRELSKTSII 135
Query: 158 CDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
+LTL+L WS EA +E YK EN P I +Q
Sbjct: 136 NNLTLILCWSAPEAAHYLELYKSSENAQPTAIRAQQ 171
>gi|425781537|gb|EKV19497.1| Mating-type switch/DNA repair protein Swi10/Rad10, putative
[Penicillium digitatum PHI26]
gi|425782768|gb|EKV20658.1| Mating-type switch/DNA repair protein Swi10/Rad10, putative
[Penicillium digitatum Pd1]
Length = 326
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 85/131 (64%), Gaps = 6/131 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
++AILV+ RQKGNP+L HI +PWEY D I DYV+G TTCA+FLS+KYH L P+YI R
Sbjct: 42 TSAILVSTRQKGNPILTHIKLLPWEYAD-IPADYVVGTTTCAMFLSLKYHRLHPEYIYSR 100
Query: 128 IKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+K L Y L+ VD +D +LK L++ ++ +LTL+L WS EA +E +K E
Sbjct: 101 VKQLAGKYNLRLVLVMVDIQDHEDSLKELSKTSIINNLTLILCWSAPEAAHYLELFKSSE 160
Query: 183 NKPPDLIMEKQ 193
N P I +Q
Sbjct: 161 NAQPTAIRAQQ 171
>gi|256074734|ref|XP_002573678.1| excision repair cross-complementing 1 ercc1 [Schistosoma mansoni]
gi|360043725|emb|CCD81271.1| putative excision repair cross-complementing 1 ercc1 [Schistosoma
mansoni]
Length = 218
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 85/130 (65%), Gaps = 10/130 (7%)
Query: 77 QKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYK 136
Q+GNP+LK I V WEY D I PD+V+GR C FLS++YH L P+YI +R++ + Y+
Sbjct: 25 QRGNPVLKQIRNVAWEYAD-IDPDFVVGRNNCIYFLSLRYHNLNPEYIFERLRQTKQHYQ 83
Query: 137 L-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIME 191
L QVD DP++ LK L ++C LTLMLAW+ EEA +E YK ENKPPD +M
Sbjct: 84 LSVLLVQVDVPDPYYPLKELCKICWTERLTLMLAWNMEEAARYLEAYKALENKPPDNLM- 142
Query: 192 KQDVDPHSKT 201
V+P ++T
Sbjct: 143 ---VEPATQT 149
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKT 39
MLAW+ EEA +E YK ENKPPD +M V+P ++T
Sbjct: 115 MLAWNMEEAARYLEAYKALENKPPDNLM----VEPATQT 149
>gi|428178864|gb|EKX47737.1| ERCC1/Rad10 nucleotide excision repair [Guillardia theta CCMP2712]
Length = 296
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIK 129
A+LV+ RQ GNPLLK I VPWE+ D I+ DY MG TCALFLS+++H LKP YI R++
Sbjct: 60 AVLVSRRQAGNPLLKFIRNVPWEHAD-ILADYQMGSQTCALFLSVRFHLLKPKYIYSRME 118
Query: 130 ALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
L +KL+V D++D L + + +L + TL+L+WSPEE+ +ETY+ +E+K
Sbjct: 119 QLQTGFKLRVLICHIDTEDSQKTLTDIHKAAILNNWTLILSWSPEESARYLETYQTYEHK 178
Query: 185 PPDLIMEKQDVDPHSK 200
D I E+ + D S+
Sbjct: 179 QADSIQERVEGDYMSR 194
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+L+WSPEE+ +ETY+ +E+K D I E+ + D S+
Sbjct: 157 ILSWSPEESARYLETYQTYEHKQADSIQERVEGDYMSR 194
>gi|350631989|gb|EHA20357.1| hypothetical protein ASPNIDRAFT_190953 [Aspergillus niger ATCC
1015]
Length = 327
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 88/140 (62%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+G S AILV+ RQKGNP+L HI +PWEY D I DYV+G TTCALFLS+KYH
Sbjct: 35 PSRSGPS----AILVSTRQKGNPILNHIKLLPWEYAD-IPADYVVGNTTCALFLSLKYHR 89
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RI+ + Y L+ VD + +LK L++ ++ +LTL+L WS EA
Sbjct: 90 LHPEYIYSRIRLIAGKYLLRIILVIVDIPNHEESLKELSKTSIVNNLTLILCWSAPEAAH 149
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K EN P I +Q
Sbjct: 150 YLELFKSSENSQPTAIRTQQ 169
>gi|156030615|ref|XP_001584634.1| hypothetical protein SS1G_14403 [Sclerotinia sclerotiorum 1980]
gi|154700794|gb|EDO00533.1| hypothetical protein SS1G_14403 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 408
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 97/156 (62%), Gaps = 8/156 (5%)
Query: 41 NFDPVPAAQNSATSESVQPS-RAGASKSSNA-ILVNPRQKGNPLLKHIGKVPWEYDDSII 98
D P A S+ + VQP+ +A AS+SS + I V+ RQKGNP+L ++ PWEY D I
Sbjct: 45 RLDRAPPANASSGPKVVQPTPQAIASRSSGSTIQVSLRQKGNPILTNLKSFPWEYSD-IP 103
Query: 99 PDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTR 153
DYV+G TTCALFLS+KYH L P+YI +RIK L Y L+ VD + +LK L++
Sbjct: 104 ADYVLGATTCALFLSLKYHRLHPEYIYNRIKGLQGKYNLRILLTMVDIGNHEESLKELSK 163
Query: 154 VCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLI 189
L+ ++T+ML WS EA +E YK +E+ P I
Sbjct: 164 TSLVNNVTVMLCWSAPEAARYLELYKSYEHANPSAI 199
>gi|406862988|gb|EKD16037.1| DNA repair protein rad10 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 406
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 98/155 (63%), Gaps = 8/155 (5%)
Query: 42 FDPVPAAQNSATSESVQPS-RAGASKSS-NAILVNPRQKGNPLLKHIGKVPWEYDDSIIP 99
D P S + VQP+ +A AS ++ ++ILV+PRQKGNP+L ++ PWE+ D +
Sbjct: 71 LDRAPPPTTSTGPKVVQPTPQAIASHTTGSSILVSPRQKGNPILTNLRSFPWEFSD-VPA 129
Query: 100 DYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRV 154
DYV+G TTCALFLS+KYH L P+YI +RIK L Y L+ VD ++ +LK L++
Sbjct: 130 DYVLGLTTCALFLSLKYHRLHPEYIYNRIKGLQGKYNLRVVLTMVDIQNHEESLKELSKT 189
Query: 155 CLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLI 189
L+ ++T+ML WS EA +E YK +E+ P I
Sbjct: 190 SLVNNVTVMLCWSAAEAARYLELYKSYEHANPSAI 224
>gi|295665857|ref|XP_002793479.1| mating-type switching protein swi10 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226277773|gb|EEH33339.1| mating-type switching protein swi10 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 358
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 89/140 (63%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+G + AILV+ RQ+GNP+L H+ VPWEY D I DYV+G +TC LFLS+KY+
Sbjct: 47 PSRSGPA----AILVSARQRGNPILNHVKHVPWEYAD-IPADYVVGNSTCMLFLSLKYYR 101
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RIK LG Y L+ VD + +LK L++ L+ +LTL+L WS EAG
Sbjct: 102 LHPEYIYSRIKGLGGRYNLRILLTMVDIPNHEDSLKELSKTSLVNNLTLILCWSAVEAGH 161
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K E+ P I +Q
Sbjct: 162 YLELFKSCEHAQPTAIRTQQ 181
>gi|336371559|gb|EGN99898.1| hypothetical protein SERLA73DRAFT_180183 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384318|gb|EGO25466.1| hypothetical protein SERLADRAFT_465670 [Serpula lacrymans var.
lacrymans S7.9]
Length = 288
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 89/135 (65%), Gaps = 6/135 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
+ N I++NP Q+ NP+L+ I V E+ D I+ D+ +GRTT L+LS+KYH L P+YI
Sbjct: 23 TGNNIIINPNQRLNPVLECIRNVGKEFGD-IVADFQVGRTTAVLYLSLKYHRLHPEYIHT 81
Query: 127 RIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RI+ LG Y L+V D + ++ LT+ CL+ ++T+M+AWS +EAG + TYK F
Sbjct: 82 RIERLGHAYNLRVLLIICDVSEHQEPIRELTKTCLINNITIMVAWSYDEAGLYLSTYKQF 141
Query: 182 ENKPPDLIMEKQDVD 196
E KPPDLI E+ D D
Sbjct: 142 EYKPPDLIKERLDKD 156
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
M+AWS +EAG + TYK FE KPPDLI E+ D D
Sbjct: 123 MVAWSYDEAGLYLSTYKQFEYKPPDLIKERLDKD 156
>gi|226293058|gb|EEH48478.1| mating-type switching protein swi10 [Paracoccidioides brasiliensis
Pb18]
Length = 358
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 89/140 (63%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+G + AILV+ RQ+GNP+L H+ VPWEY D I DYV+G +TC LFLS+KY+
Sbjct: 47 PSRSGPA----AILVSARQRGNPILNHVKHVPWEYAD-IPADYVVGNSTCILFLSLKYYR 101
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RIK LG Y L+ VD + +LK L++ L+ +LTL+L WS EAG
Sbjct: 102 LHPEYIYSRIKGLGGKYNLRILLIMVDIPNHEDSLKELSKTSLVNNLTLILCWSAVEAGH 161
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K E+ P I +Q
Sbjct: 162 YLELFKSCEHAQPTAIRTQQ 181
>gi|389640635|ref|XP_003717950.1| mating-type switching protein swi10 [Magnaporthe oryzae 70-15]
gi|351640503|gb|EHA48366.1| mating-type switching protein swi10 [Magnaporthe oryzae 70-15]
Length = 408
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 95/145 (65%), Gaps = 8/145 (5%)
Query: 46 PAAQNSATSESVQPS-RAGASKSS-NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVM 103
P A N ++ VQP+ +A SKSS ++ILV+PRQK NP+L+ I VPWEY D I DYV+
Sbjct: 67 PPAANGGAAKIVQPTPQALPSKSSGSSILVSPRQKSNPVLEWIKSVPWEYSD-IPADYVL 125
Query: 104 GRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLC 158
G TTCALFLS+KYH L P+YI RI+ L + ++ VD + AL+ L++ L+
Sbjct: 126 GLTTCALFLSLKYHRLHPEYIYTRIRNLQGKFNMRILLTMVDIPNHEEALRELSKTSLVN 185
Query: 159 DLTLMLAWSPEEAGEMIETYKVFEN 183
D+TLML WS EA +E YK +E+
Sbjct: 186 DVTLMLCWSSHEAARYLELYKSYEH 210
>gi|225683697|gb|EEH21981.1| mating-type switching protein swi10 [Paracoccidioides brasiliensis
Pb03]
Length = 358
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 89/140 (63%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+G + AILV+ RQ+GNP+L H+ VPWEY D I DYV+G +TC LFLS+KY+
Sbjct: 47 PSRSGPA----AILVSARQRGNPILNHVKHVPWEYAD-IPADYVVGNSTCILFLSLKYYR 101
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RIK LG Y L+ VD + +LK L++ L+ +LTL+L WS EAG
Sbjct: 102 LHPEYIYSRIKGLGGKYNLRILLIMVDIPNHEDSLKELSKTSLVNNLTLILCWSAVEAGH 161
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K E+ P I +Q
Sbjct: 162 YLELFKSCEHAQPTAIRTQQ 181
>gi|391327125|ref|XP_003738057.1| PREDICTED: DNA excision repair protein ERCC-1-like [Metaseiulus
occidentalis]
Length = 213
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 93/150 (62%), Gaps = 5/150 (3%)
Query: 56 SVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIK 115
S + + + S ILV+PRQK NP+L + KV +E+ D ++ D+V+G++ C LFLS++
Sbjct: 2 STEKATTSSGTLSLNILVHPRQKNNPVLNFVKKVAYEFRDDLLADFVVGQSACCLFLSLR 61
Query: 116 YHALKPDYIADRIKALGKLYK-----LQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEE 170
YH +P YI R+ L L+ +QVD KD ++ + R+ L +TLM WS ++
Sbjct: 62 YHQAQPQYIVKRLNDLRNLFTVRILFVQVDIKDAPPVIREMNRMALQARVTLMPGWSAQD 121
Query: 171 AGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
G+ +E YK+ ENK PDLI E+ +++P ++
Sbjct: 122 IGQYLELYKILENKQPDLIRERIEMEPLTR 151
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
M WS ++ G+ +E YK+ ENK PDLI E+ +++P ++
Sbjct: 114 MPGWSAQDIGQYLELYKILENKQPDLIRERIEMEPLTR 151
>gi|242220518|ref|XP_002476024.1| predicted protein [Postia placenta Mad-698-R]
gi|220724747|gb|EED78769.1| predicted protein [Postia placenta Mad-698-R]
Length = 186
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 86/127 (67%), Gaps = 6/127 (4%)
Query: 78 KGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL 137
+GNP+L+HI V E + I+ DY +GRTT LFLS++YH L P+YI RI+ LG Y L
Sbjct: 1 RGNPVLEHIRNVGKEVRE-IVADYQVGRTTGVLFLSLRYHRLHPEYIHKRIEELGNSYNL 59
Query: 138 QV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEK 192
++ D + ++ LT++CL+ ++T+M+AW+PEEAG + TYK FE+KPPDLI E+
Sbjct: 60 RILLLMCDVSEHQEPIRELTKICLINNITIMVAWTPEEAGFYLSTYKQFEHKPPDLIKER 119
Query: 193 QDVDPHS 199
D H+
Sbjct: 120 VDKSYHA 126
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS 60
M+AW+PEEAG + TYK FE+KPPDLI E+ D H+ + N E+++ S
Sbjct: 90 MVAWTPEEAGFYLSTYKQFEHKPPDLIKERVDKSYHAMLRTALTSISKVNKTDVETLRTS 149
Query: 61 RAGASKSSNA 70
+ S A
Sbjct: 150 FGSFAAISRA 159
>gi|389743819|gb|EIM85003.1| hypothetical protein STEHIDRAFT_99952 [Stereum hirsutum FP-91666
SS1]
Length = 389
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 94/138 (68%), Gaps = 6/138 (4%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
I++NP Q+ NP+L+ I V E+ D I+ D+ +G+TT LFLS++YH L P+YI RI+
Sbjct: 39 IIINPNQRLNPVLECIRNVGKEFGD-IVVDFQVGKTTGVLFLSLRYHRLHPEYIHKRIEV 97
Query: 131 LGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKP 185
LG Y L++ D + ++ LT++C++ ++T+++AWSP+EAG+ + T+K FE++P
Sbjct: 98 LGHSYNLRILLLLCDITEHQEHIRELTKICIINNITMIVAWSPDEAGQYLATFKQFEHRP 157
Query: 186 PDLIMEKQDVDPHSKTWN 203
PDLI E+ + +P + N
Sbjct: 158 PDLIRERVEREPMAMLRN 175
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
++AWSP+EAG+ + T+K FE++PPDLI E+ + +P + N
Sbjct: 135 IVAWSPDEAGQYLATFKQFEHRPPDLIRERVEREPMAMLRN 175
>gi|358365934|dbj|GAA82555.1| mating-type switching protein Swi10 [Aspergillus kawachii IFO 4308]
Length = 326
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 88/140 (62%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+G S AILV+ RQKGNP+L HI +PWEY D I DYV+G TTCALFLS+KYH
Sbjct: 35 PSRSGPS----AILVSTRQKGNPILNHIKLLPWEYAD-IPADYVVGNTTCALFLSLKYHR 89
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RI+ + Y L+ VD + +LK L++ ++ ++TL+L WS EA
Sbjct: 90 LHPEYIYSRIRLIAGKYLLRIILVIVDIPNHEESLKELSKTSIVNNMTLILCWSAPEAAH 149
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K EN P I +Q
Sbjct: 150 YLELFKSSENSQPTAIRTQQ 169
>gi|453089965|gb|EMF18005.1| hypothetical protein SEPMUDRAFT_146885 [Mycosphaerella populorum
SO2202]
Length = 410
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 103/186 (55%), Gaps = 18/186 (9%)
Query: 31 QDVDPHSKTWNFDPVPAAQNSATSESVQ-------PSRAGASKSSNAILVNPRQKGNPLL 83
Q V P + D A +S T VQ P RAG + +I+V+PRQKGNPLL
Sbjct: 47 QHVAPARQQQGMDRQSGA-SSTTKTGVQQPKPQALPRRAGPA----SIIVSPRQKGNPLL 101
Query: 84 KHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ----- 138
+ I +PWEY D I DYV+G TTCALFLS+KYH L P+YI RIK L Y L+
Sbjct: 102 EKIKSLPWEYGD-IPADYVLGVTTCALFLSLKYHRLHPEYIYTRIKNLQGKYALRIVLCM 160
Query: 139 VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPH 198
VD ++ +LK L++ ++ ++T++L WS E +E +K +E+ P I + Q
Sbjct: 161 VDIQNHEESLKELSKTSVINNVTIILCWSAAEGARYLELFKTYEHAAPTSIKQHQSTSYS 220
Query: 199 SKTWNF 204
+ +F
Sbjct: 221 DRMVDF 226
>gi|145256514|ref|XP_001401422.1| mating-type switch/DNA repair protein Swi10/Rad10 [Aspergillus
niger CBS 513.88]
gi|134058325|emb|CAK38514.1| unnamed protein product [Aspergillus niger]
Length = 327
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 88/140 (62%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+G S AILV+ RQKGNP+L HI +PWEY D I DYV+G TTCALFLS+KYH
Sbjct: 35 PSRSGPS----AILVSTRQKGNPILNHIKLLPWEYAD-IPADYVVGNTTCALFLSLKYHR 89
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RI+ + Y L+ VD + +LK L++ ++ +LTL+L WS EA
Sbjct: 90 LHPEYIYSRIRLIAGKYLLRIILVIVDIPNHEESLKELSKTSIVNNLTLILCWSAPEAAH 149
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K EN P I +Q
Sbjct: 150 YLELFKSSENSQPIAIRTQQ 169
>gi|331235911|ref|XP_003330615.1| hypothetical protein PGTG_12152 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309309605|gb|EFP86196.1| hypothetical protein PGTG_12152 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 264
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 98/161 (60%), Gaps = 10/161 (6%)
Query: 45 VPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMG 104
+P A N + V P+R +SN I+VN Q+GNP+L I VPWE+ ++I DY +
Sbjct: 38 IPPA-NDIQNRPVAPNRPA---NSNNIIVNKCQRGNPVLTLIKSVPWEFGETI-SDYQLN 92
Query: 105 RTTCALFLSIKYHALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCD 159
+TT +LFLS+KYH L PDY+ R+K L K Y L++ DS D LK +T+ C++ +
Sbjct: 93 QTTGSLFLSLKYHRLHPDYLDTRLKKLIKAYDLKILLCLCDSNDHEVVLKDITKTCMVNE 152
Query: 160 LTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
TL++AWS E I+ +K FE + PDLI EK D D S+
Sbjct: 153 FTLIVAWSNAEIARYIQLFKSFEKRSPDLIKEKIDNDYMSQ 193
>gi|302849199|ref|XP_002956130.1| hypothetical protein VOLCADRAFT_33669 [Volvox carteri f.
nagariensis]
gi|300258635|gb|EFJ42870.1| hypothetical protein VOLCADRAFT_33669 [Volvox carteri f.
nagariensis]
Length = 209
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 6/140 (4%)
Query: 62 AGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKP 121
AG ++ N +LVN RQ+GNP+LKHI V W++ D I+PDY +G+ T ALFLS++YH L+P
Sbjct: 4 AGPARPPNVVLVNRRQQGNPVLKHIRNVRWQFAD-IVPDYQLGQNTAALFLSLRYHLLRP 62
Query: 122 DYIADRIKALGKLYKLQVDSKDPHHA-----LKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
DYI RIK ++++L V L +TR ++ D TL+ W+PEE +E
Sbjct: 63 DYILHRIKEQQRMFRLTVLLVHVDVDDVVKPLGEVTRAAVVGDCTLVCGWTPEECARWLE 122
Query: 177 TYKVFENKPPDLIMEKQDVD 196
TYK +E+KP I E+ + D
Sbjct: 123 TYKSYESKPASSIQERVEPD 142
>gi|307111014|gb|EFN59249.1| hypothetical protein CHLNCDRAFT_19196 [Chlorella variabilis]
Length = 297
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 90/138 (65%), Gaps = 6/138 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
+NAI+V+ RQ+GNP+LK+I V W++ D I+PD+++GR T LFLS+++H LKP+YI R
Sbjct: 41 TNAIIVSTRQEGNPVLKYIRNVRWQFGD-IVPDFLLGRETACLFLSLRFHLLKPEYIYHR 99
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
IK L + Y+L VD++D L +TR + D TL+ WS +E +ET+K +E
Sbjct: 100 IKELQRSYRLSIIMCHVDTEDAVEPLAQVTRAAIGNDCTLVCGWSNQECARYLETFKSYE 159
Query: 183 NKPPDLIMEKQDVDPHSK 200
NKP ++I + D S+
Sbjct: 160 NKPAEVIQKDLGTDYLSR 177
>gi|449304950|gb|EMD00957.1| hypothetical protein BAUCODRAFT_44173, partial [Baudoinia
compniacensis UAMH 10762]
Length = 342
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 86/140 (61%), Gaps = 6/140 (4%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIK 129
+I+V+PRQKGNP+L I +PWEY D I DYV+G TTCALFLS+KYH L P+YI RI+
Sbjct: 20 SIIVSPRQKGNPVLAAIKSMPWEYGD-IPADYVLGVTTCALFLSLKYHRLHPEYIYTRIR 78
Query: 130 ALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
L Y L+ VD ++ +LK L++ L+ ++TL+L WS E G +E +K +EN
Sbjct: 79 NLQGKYNLRIVLVMVDIQNHEESLKELSKTSLINNVTLVLCWSAVEGGRYLELFKTYENA 138
Query: 185 PPDLIMEKQDVDPHSKTWNF 204
P I + Q + F
Sbjct: 139 APTSIKQHQSTSYSDRMVEF 158
>gi|440794479|gb|ELR15639.1| DNA repair protein rad10 subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 485
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 89/151 (58%), Gaps = 6/151 (3%)
Query: 55 ESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSI 114
+ + P G S +LV+ RQ+GN LLK++ V WEY ++++PDYVMG CAL+LSI
Sbjct: 206 QDLNPYSDGRRGPSRPLLVSTRQRGNRLLKYLNNVRWEYSETVLPDYVMGGQACALYLSI 265
Query: 115 KYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPE 169
KYH L P+YI R++ LG + L VD + L+ L +C TL+ AWS
Sbjct: 266 KYHLLHPEYILTRMRQLGSKFNLSIVLCLVDVEGSTQPLEELMLLCTNMGFTLICAWSLA 325
Query: 170 EAGEMIETYKVFENKPPDLIMEK-QDVDPHS 199
EA +ETYK +ENK +I E+ Q +P++
Sbjct: 326 EAARYLETYKAYENKGAKIIKEQVQSGNPYA 356
>gi|408390738|gb|EKJ70125.1| hypothetical protein FPSE_09651 [Fusarium pseudograminearum CS3096]
Length = 387
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 93/159 (58%), Gaps = 8/159 (5%)
Query: 42 FDPVPAAQNSATSESVQPSRAG--ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIP 99
D P + S+ + VQP+ +S + ILV+PRQ+GNP+L I +PWEY D I
Sbjct: 39 LDKAPPSSASSAGKVVQPTPQALPQKQSGSTILVSPRQRGNPVLTSIRSMPWEYSD-IPS 97
Query: 100 DYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRV 154
DYV+G TCALFLS+KYH L P+YI RI+ L Y L+ VD + +LK L++
Sbjct: 98 DYVLGLGTCALFLSLKYHRLHPEYIYTRIRNLQGKYNLRILLTMVDIPNHEASLKELSKT 157
Query: 155 CLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
L+ ++TL+L WS EA IE YK +EN I +Q
Sbjct: 158 SLVNNVTLILCWSAAEAARYIELYKSYENASFGAIRGQQ 196
>gi|46134239|ref|XP_389435.1| hypothetical protein FG09259.1 [Gibberella zeae PH-1]
Length = 386
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 93/159 (58%), Gaps = 8/159 (5%)
Query: 42 FDPVPAAQNSATSESVQPSRAG--ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIP 99
D P + S+ + VQP+ +S + ILV+PRQ+GNP+L I +PWEY D I
Sbjct: 39 LDKAPPSSASSAGKVVQPTPQALPQKQSGSTILVSPRQRGNPVLTSIRSMPWEYSD-IPS 97
Query: 100 DYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRV 154
DYV+G TCALFLS+KYH L P+YI RI+ L Y L+ VD + +LK L++
Sbjct: 98 DYVLGLGTCALFLSLKYHRLHPEYIYTRIRNLQGKYNLRILLTMVDIPNHEASLKELSKT 157
Query: 155 CLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
L+ ++TL+L WS EA IE YK +EN I +Q
Sbjct: 158 SLVNNVTLILCWSAAEAARYIELYKSYENASFGAIRGQQ 196
>gi|403416893|emb|CCM03593.1| predicted protein [Fibroporia radiculosa]
Length = 1294
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 87/127 (68%), Gaps = 6/127 (4%)
Query: 78 KGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL 137
+GNP+L+ + + E+ D I+ DY +GRTT LFLS++YH L P+YI RI+ LG+ Y L
Sbjct: 958 RGNPILESVRNIGKEFGD-IVADYQVGRTTGVLFLSLRYHRLHPEYIHQRIERLGRSYNL 1016
Query: 138 QV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEK 192
++ D + ++ LT+VCL+ ++T+M+AW+ EEAG + TYK FE+KPPD+I E+
Sbjct: 1017 RILLLMCDVSEHQEPIRELTKVCLINNMTIMVAWNAEEAGFYLSTYKQFEHKPPDMIKER 1076
Query: 193 QDVDPHS 199
D D +S
Sbjct: 1077 VDKDYYS 1083
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHS 37
M+AW+ EEAG + TYK FE+KPPD+I E+ D D +S
Sbjct: 1047 MVAWNAEEAGFYLSTYKQFEHKPPDMIKERVDKDYYS 1083
>gi|326436782|gb|EGD82352.1| excision repair cross-complementing rodent repair deficiency
[Salpingoeca sp. ATCC 50818]
Length = 548
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
N + V+ RQKGNP+L+HI VPW+Y + D+VMG+ TC LFLS++YH L P+YI RI
Sbjct: 342 NFVRVDVRQKGNPVLQHIRNVPWQYCEQKA-DFVMGKRTCGLFLSLRYHLLHPEYIHGRI 400
Query: 129 KALGKLYK-----LQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
+ +G+LY+ + VD +D L LT++C++ + TLML WS +E G +ETYK +EN
Sbjct: 401 REVGRLYQVRVLLVLVDVRDSQPVLMDLTKLCMVHNYTLMLGWSNKEVGRYVETYKAYEN 460
Query: 184 KPPDLIME 191
K D + +
Sbjct: 461 KSADALQQ 468
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIME 29
ML WS +E G +ETYK +ENK D + +
Sbjct: 440 MLGWSNKEVGRYVETYKAYENKSADALQQ 468
>gi|320166062|gb|EFW42961.1| excision repair enzyme ERCC-1 [Capsaspora owczarzaki ATCC 30864]
Length = 509
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 98/156 (62%), Gaps = 10/156 (6%)
Query: 47 AAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHI-GKVPWEYDDSIIPDYVMGR 105
+AQ S + +R G + + VN RQ+ NP+LK I G VP+E + ++PD+VMGR
Sbjct: 160 SAQVKRASSTPTLTRGGGA---TCLQVNKRQEHNPMLKCISGTVPYEIVE-MVPDFVMGR 215
Query: 106 TTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDL 160
+ CAL+LS++YH L P+Y+ R++ L +Y+L+ VD KD L+ LT V +
Sbjct: 216 SVCALYLSLRYHLLHPEYLWQRMRELRNMYELRILLILVDIKDTQRVLRELTTVTVRFKF 275
Query: 161 TLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 196
T++LAWS +EA +ETYK++E+KP D + E+ D D
Sbjct: 276 TVVLAWSEDEAARYLETYKMYESKPADALKERIDTD 311
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWS +EA +ETYK++E+KP D + E+ D D
Sbjct: 278 VLAWSEDEAARYLETYKMYESKPADALKERIDTD 311
>gi|169773973|ref|XP_001821455.1| mating-type switch/DNA repair protein Swi10/Rad10 [Aspergillus
oryzae RIB40]
gi|238492006|ref|XP_002377240.1| mating-type switch/DNA repair protein Swi10/Rad10, putative
[Aspergillus flavus NRRL3357]
gi|83769316|dbj|BAE59453.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697653|gb|EED53994.1| mating-type switch/DNA repair protein Swi10/Rad10, putative
[Aspergillus flavus NRRL3357]
gi|391869113|gb|EIT78318.1| structure-specific endonuclease ERCC1-XPF, ERCC1 component
[Aspergillus oryzae 3.042]
Length = 342
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 86/140 (61%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+ S AILV+ RQKGNP+L HI +PWEY D I DYV+G TTCALFLS+KYH
Sbjct: 51 PSRSTPS----AILVSTRQKGNPILNHIKLLPWEYAD-IPADYVVGATTCALFLSLKYHR 105
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RI+ L Y L+ VD + +LK L++ ++ +LTL L WS EA
Sbjct: 106 LHPEYIYSRIRLLAGKYLLRILLIMVDIPNHEDSLKELSKTSIINNLTLTLCWSAPEAAH 165
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K EN P I +Q
Sbjct: 166 YLELFKSSENSQPTAIRTQQ 185
>gi|393220920|gb|EJD06405.1| DNA repair protein rad10, partial [Fomitiporia mediterranea MF3/22]
Length = 186
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 85/120 (70%), Gaps = 6/120 (5%)
Query: 80 NPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQV 139
NPLL+ + V E+ D IIPD+ +GRTTCAL+LS++YH L P+YI RI+ LG L+ L++
Sbjct: 3 NPLLECVRNVSKEFGD-IIPDFQLGRTTCALYLSLRYHRLHPEYIHQRIQRLGNLFTLRL 61
Query: 140 -----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQD 194
D + ++ LT++CL+ ++T+++ WS EEAG + TYK+FE++PPDLI E+ D
Sbjct: 62 LILMCDVSEHQEPIRELTKICLINNITIIVCWSNEEAGMYLATYKLFEHRPPDLIKERVD 121
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS 60
++ WS EEAG + TYK+FE++PPDLI E+ D + ++ + N E+++ S
Sbjct: 90 IVCWSNEEAGMYLATYKLFEHRPPDLIKERVDKEYNAMLRSALTSINKVNKTDVETLRTS 149
Query: 61 RAGASKSSNA 70
SK ++
Sbjct: 150 FGSFSKIAHT 159
>gi|452821311|gb|EME28343.1| DNA excision repair protein ERCC-1 [Galdieria sulphuraria]
Length = 258
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 92/145 (63%), Gaps = 7/145 (4%)
Query: 63 GASKSSNAILVN-PRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKP 121
+K+++ I+VN QK NPL I +V W Y + I+PDY++GR TCALFL I H L P
Sbjct: 54 AQAKANHFIVVNQATQKNNPLNGFIKQVLWNYGN-IVPDYLLGRYTCALFLRISQHLLTP 112
Query: 122 DYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
YI DR+KA+GK ++L+ +D +D ALK +T++C+ + TL++ + +EA +E
Sbjct: 113 QYIYDRVKAIGKQFRLRILVCLIDVEDFELALKEVTKLCVFSEFTLIVTRNEKEAARYLE 172
Query: 177 TYKVFENKPPDLIMEKQDVDPHSKT 201
TY ENKP D++ E+ + D SK
Sbjct: 173 TYFALENKPTDVLRERTEQDYISKV 197
>gi|342880208|gb|EGU81382.1| hypothetical protein FOXB_08111 [Fusarium oxysporum Fo5176]
Length = 386
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 94/159 (59%), Gaps = 9/159 (5%)
Query: 42 FDPVPAAQNSATSESVQPSRAG--ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIP 99
D P A +SA + VQP+ +S + ILV+PRQ+GNP+L I +PWEY D I
Sbjct: 43 LDKAPPAASSA-GKVVQPTPQALPQKQSGSTILVSPRQRGNPVLTSIRSMPWEYSD-IPA 100
Query: 100 DYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRV 154
DYV+G TCALFLS+KYH L P+YI RI+ L Y L+ VD + +LK L++
Sbjct: 101 DYVLGLGTCALFLSLKYHRLHPEYIYTRIRNLQGKYNLRILLTMVDIPNHEASLKELSKT 160
Query: 155 CLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
L+ ++TL+L WS EA IE YK +EN I +Q
Sbjct: 161 SLVNNVTLILCWSAAEAARYIELYKSYENATFGAIRGQQ 199
>gi|452987609|gb|EME87364.1| hypothetical protein MYCFIDRAFT_201097 [Pseudocercospora fijiensis
CIRAD86]
Length = 371
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 86/140 (61%), Gaps = 6/140 (4%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIK 129
+I+V+PRQKGNP+L I +PWEY D I DY++G TTCALFLS+KYH L P+YI RIK
Sbjct: 44 SIIVSPRQKGNPVLDKIKSMPWEYGD-IPADYLLGLTTCALFLSLKYHRLHPEYIYTRIK 102
Query: 130 ALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
L Y L+ VD ++ +LK L++ ++ ++T++L WS E +E YK +EN
Sbjct: 103 NLQHKYALRIVLCMVDIQNHEESLKELSKTSVINNVTIILCWSAAEGARYLELYKTYENA 162
Query: 185 PPDLIMEKQDVDPHSKTWNF 204
P I + Q + +F
Sbjct: 163 APTSIRQHQSTTYSDRMIDF 182
>gi|171682146|ref|XP_001906016.1| hypothetical protein [Podospora anserina S mat+]
gi|170941032|emb|CAP66682.1| unnamed protein product [Podospora anserina S mat+]
Length = 290
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 91/151 (60%), Gaps = 8/151 (5%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSRA S SS ILV+PRQKGNP+L I +PWEY D I DY +G TTCALFLS+KYH
Sbjct: 96 PSRASGSGSS--ILVSPRQKGNPVLACIKSIPWEYSD-IPADYALGATTCALFLSLKYHR 152
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RI+ L + + L+ VD + +L+ L++ L+ ++T++L WS EAG
Sbjct: 153 LHPEYIYTRIRLLQQRFLLRILLVLVDIPNHEDSLRELSKTSLVNNVTVILCWSAAEAGR 212
Query: 174 MIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
+E YK +E+ I +Q K F
Sbjct: 213 YLELYKSYEHASAAGIKGQQATGYAEKLVEF 243
>gi|358383843|gb|EHK21504.1| hypothetical protein TRIVIDRAFT_152287 [Trichoderma virens Gv29-8]
Length = 319
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 86/141 (60%), Gaps = 6/141 (4%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
+AILV+PRQ+GNPLL I +PWEY D I DYV+G TTCALFLS+KYH L P+YI RI
Sbjct: 50 SAILVSPRQRGNPLLTSIRSIPWEYSD-IPADYVLGLTTCALFLSLKYHRLHPEYIYTRI 108
Query: 129 KALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
+ L Y L+ VD + +L+ L++ ++ ++T++L WS EA +E YK +EN
Sbjct: 109 RNLQGKYNLRILLTLVDIPNHEDSLRELSKTSVVNNVTVILCWSAAEAARYLELYKSYEN 168
Query: 184 KPPDLIMEKQDVDPHSKTWNF 204
I +Q + K F
Sbjct: 169 ANFSAIRGQQSSNYADKLVEF 189
>gi|302823991|ref|XP_002993643.1| hypothetical protein SELMODRAFT_137345 [Selaginella moellendorffii]
gi|300138571|gb|EFJ05335.1| hypothetical protein SELMODRAFT_137345 [Selaginella moellendorffii]
Length = 209
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 86/129 (66%), Gaps = 6/129 (4%)
Query: 77 QKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYK 136
Q+GNP+LK I V W +DD I+PDYV+G+++CAL+LSI+YH L PDY+ RI+ L K ++
Sbjct: 1 QQGNPVLKFIRNVRWTFDD-IVPDYVLGQSSCALYLSIRYHLLHPDYLYFRIRELQKNFR 59
Query: 137 LQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIME 191
L+ VD +D L +T+ LL D +L+ AWS EE +ET K++ENKP D I E
Sbjct: 60 LRVVLCYVDVEDVIKPLHEVTKTALLHDCSLLCAWSLEECARYLETIKMYENKPADNIQE 119
Query: 192 KQDVDPHSK 200
+ D D S+
Sbjct: 120 RTDQDYLSR 128
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+ AWS EE +ET K++ENKP D I E+ D D S+
Sbjct: 91 LCAWSLEECARYLETIKMYENKPADNIQERTDQDYLSR 128
>gi|225560421|gb|EEH08702.1| mating-type switching protein swi10 [Ajellomyces capsulatus G186AR]
Length = 343
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+ S +ILV+ RQ+GNP+L H+ VPWEY D I DY++G TTC LFLS+KY+
Sbjct: 48 PSRSSPS----SILVSARQRGNPILNHVRHVPWEYAD-IPADYIVGSTTCVLFLSLKYYR 102
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RIK L Y L+ +D + +L+ L++ L+ +LTL+L WS EAG
Sbjct: 103 LHPEYIYSRIKGLAGKYNLRILLTLIDIPNHEDSLRELSKTSLVNNLTLILCWSAAEAGH 162
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K E+ P I +Q
Sbjct: 163 YLELFKSCEHAQPTAIRTQQ 182
>gi|310798606|gb|EFQ33499.1| DNA repair protein rad10 [Glomerella graminicola M1.001]
Length = 404
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 94/159 (59%), Gaps = 8/159 (5%)
Query: 42 FDPVPAAQNSATSESVQPSRAGASK--SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIP 99
D P S+ S+ VQP+ + S +AILV+PRQ+GNP+L + +PWEY D I+
Sbjct: 50 LDKAPPTNASSRSKVVQPTPQALPQRGSGSAILVSPRQRGNPVLASLKSMPWEYSD-IVA 108
Query: 100 DYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRV 154
DY +G TTCALFLS+KYH L P+YI RI+ L Y L+ VD + L+ L++
Sbjct: 109 DYSLGLTTCALFLSLKYHRLHPEYIYTRIRNLQGKYNLRIMLTMVDIPNHEEVLRELSKT 168
Query: 155 CLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
L+ ++T++L WS EA +E YK +E+ I +Q
Sbjct: 169 SLVNNVTIILCWSAAEAARYLELYKSYEHANFSAIRGQQ 207
>gi|409044902|gb|EKM54383.1| hypothetical protein PHACADRAFT_174878 [Phanerochaete carnosa
HHB-10118-sp]
Length = 382
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 91/137 (66%), Gaps = 6/137 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
N +LVNP Q+GNP+L+ I V E+ D ++ DY +GRTT L+LS++YH L P+YI R
Sbjct: 34 GNNVLVNPCQRGNPVLECIKNVGKEFGD-VVCDYQVGRTTGVLYLSLRYHRLHPEYIHQR 92
Query: 128 IKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
I+ G + L++ D + +++ LT+ CL+ ++T+++AW+ EEAG + T+K FE
Sbjct: 93 IERFGTAFNLRILLILCDVSEHQDSIRELTKTCLINNITVVVAWTLEEAGFYLSTFKQFE 152
Query: 183 NKPPDLIMEKQDVDPHS 199
+KPP LI E+ D D +S
Sbjct: 153 HKPPTLIKERVDKDYNS 169
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHS 37
++AW+ EEAG + T+K FE+KPP LI E+ D D +S
Sbjct: 133 VVAWTLEEAGFYLSTFKQFEHKPPTLIKERVDKDYNS 169
>gi|67528261|ref|XP_661935.1| hypothetical protein AN4331.2 [Aspergillus nidulans FGSC A4]
gi|40741302|gb|EAA60492.1| hypothetical protein AN4331.2 [Aspergillus nidulans FGSC A4]
gi|259482862|tpe|CBF77745.1| TPA: DNA repair endonuclease (Eurofung) [Aspergillus nidulans FGSC
A4]
Length = 328
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 95/154 (61%), Gaps = 14/154 (9%)
Query: 50 NSATSESVQPS-RAGASKSS-NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTT 107
+AT + QP +A ASKS +AILV+ RQKGNP+L HI PWEY D I DYV+G TT
Sbjct: 33 GAATPKVQQPKPQALASKSGPSAILVSTRQKGNPILNHIKFQPWEYAD-IPADYVIGATT 91
Query: 108 CALFLSIKYHALKPDYIADRIKALGKLYKLQV--------DSKDPHHALKYLTRVCLLCD 159
CALFLS+KYH L P+YI RIK L Y L+V + +DP LK L++ ++ +
Sbjct: 92 CALFLSLKYHRLHPEYIYSRIKQLAGKYLLRVLLIIVDIPNHEDP---LKELSKTSIINN 148
Query: 160 LTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
LTL+L WS EA +E +K E+ P I +Q
Sbjct: 149 LTLILCWSAPEAAHYLELFKSCEHSQPTAIRTQQ 182
>gi|261193240|ref|XP_002623026.1| mating-type switching protein swi10 [Ajellomyces dermatitidis
SLH14081]
gi|239589161|gb|EEQ71804.1| mating-type switching protein swi10 [Ajellomyces dermatitidis
SLH14081]
gi|327356848|gb|EGE85705.1| mating-type switching protein swi10 [Ajellomyces dermatitidis ATCC
18188]
Length = 359
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+G S AILV+ RQ+GNP+L H+ +PWEY D I DYV+G TC LFLS+KY+
Sbjct: 48 PSRSGPS----AILVSARQRGNPILNHVRHIPWEYAD-IPADYVVGSATCVLFLSLKYYR 102
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RIK L Y L+ +D + +L+ L++ ++ +LTL+L WS EAG
Sbjct: 103 LHPEYIYARIKGLAGKYNLRILLTLIDIPNHEDSLRELSKTSIVNNLTLILCWSAAEAGH 162
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K E+ P I +Q
Sbjct: 163 YLELFKSCEHAQPTAIRTQQ 182
>gi|154304059|ref|XP_001552435.1| hypothetical protein BC1G_09665 [Botryotinia fuckeliana B05.10]
gi|347441513|emb|CCD34434.1| similar to mating-type switching protein swi10 [Botryotinia
fuckeliana]
Length = 387
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 96/150 (64%), Gaps = 9/150 (6%)
Query: 42 FDPVPAAQN-SATSESVQPS-RAGASKSS-NAILVNPRQKGNPLLKHIGKVPWEYDDSII 98
D P N SA + VQP +A AS+SS ++I V+ RQKGNP+L ++ PWEY D I+
Sbjct: 46 LDRAPPTNNASAGPKVVQPVPQAIASRSSGSSIQVSLRQKGNPILTNLKSFPWEYSD-IL 104
Query: 99 PDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTR 153
DYV+G TTCALFLS+KYH L P+YI +RIK L Y L+ VD + +LK L++
Sbjct: 105 ADYVLGTTTCALFLSLKYHRLHPEYIYNRIKGLQGKYNLRVLLTMVDIGNHEESLKELSK 164
Query: 154 VCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
L+ ++T++L WS EA +E YK +E+
Sbjct: 165 TSLVNNVTVILCWSALEAARYLELYKSYEH 194
>gi|380482107|emb|CCF41448.1| DNA repair protein rad10 [Colletotrichum higginsianum]
Length = 412
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 97/162 (59%), Gaps = 14/162 (8%)
Query: 42 FDPVPAAQNSATSESVQPS-----RAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS 96
D P A +S++ + VQP+ + G S +AILV+PRQ+GNP+L + +PWEY D
Sbjct: 50 LDRAPPANSSSSGKVVQPTPQPLPQRG---SGSAILVSPRQRGNPVLASLKSMPWEYSD- 105
Query: 97 IIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYL 151
I DY +G TTCALFLS+KYH L P+YI RI+ L Y L+ VD + L+ L
Sbjct: 106 IAADYGLGLTTCALFLSLKYHRLHPEYIYTRIRNLQGKYNLRIMLTMVDIPNHEEVLREL 165
Query: 152 TRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
++ L+ ++T++L WS EA +E YK +E+ + I +Q
Sbjct: 166 SKTSLVNNVTIILCWSAAEAARYLELYKSYEHANFNAIRGQQ 207
>gi|239606562|gb|EEQ83549.1| mating-type switching protein swi10 [Ajellomyces dermatitidis ER-3]
Length = 359
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+G S AILV+ RQ+GNP+L H+ +PWEY D I DYV+G TC LFLS+KY+
Sbjct: 48 PSRSGPS----AILVSARQRGNPILNHVRHIPWEYAD-IPADYVVGSATCVLFLSLKYYR 102
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RIK L Y L+ +D + +L+ L++ ++ +LTL+L WS EAG
Sbjct: 103 LHPEYIYARIKGLAGKYNLRILLTLIDIPNHEDSLRELSKTSIVNNLTLILCWSAAEAGH 162
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K E+ P I +Q
Sbjct: 163 YLELFKSCEHAQPTAIRTQQ 182
>gi|322710849|gb|EFZ02423.1| mating-type switching protein swi10 [Metarhizium anisopliae ARSEF
23]
Length = 839
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 6/120 (5%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
+ ILV+PRQ+GNP+L I +PWEY D I DYVMG TTCALFLS+KYH L P+YI RI
Sbjct: 499 STILVSPRQRGNPVLTSIRSLPWEYSD-IPADYVMGLTTCALFLSLKYHRLHPEYIYTRI 557
Query: 129 KALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
+ L Y L+ VD + L+ L++ L+ ++T++L WS EAG +E YK +EN
Sbjct: 558 RNLQGKYNLRILLTMVDIPNHEDCLRELSKTSLVNNVTIILCWSAAEAGRYLELYKSYEN 617
>gi|159470289|ref|XP_001693292.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277550|gb|EDP03318.1| predicted protein [Chlamydomonas reinhardtii]
Length = 188
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 80/129 (62%), Gaps = 6/129 (4%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
ILVN RQ+GNP+LKHI V W++ D IIPDY +G T ALFLS++YH L PDYI RIK
Sbjct: 2 ILVNKRQQGNPVLKHIRNVRWQFGD-IIPDYQLGLNTAALFLSLRYHLLHPDYILHRIKE 60
Query: 131 LGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKP 185
+L++L VD D L +TR ++ D TL+ AWSPEE +ETYK +E+K
Sbjct: 61 QQRLFRLTVLLCHVDVDDCIKPLGEVTRAAVVGDCTLVCAWSPEECARWLETYKSYESKS 120
Query: 186 PDLIMEKQD 194
Q+
Sbjct: 121 ATYFAVAQE 129
>gi|400599946|gb|EJP67637.1| DNA repair protein rad10 [Beauveria bassiana ARSEF 2860]
Length = 392
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 16/174 (9%)
Query: 42 FDPVPAAQNSATSESVQPS------RAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDD 95
D P A + + + VQP+ R GAS ILV+PRQ+GNP+L H+ +PWEY D
Sbjct: 45 LDKAPPAASGSGGKVVQPTPQSLPQRQGASN----ILVSPRQRGNPVLTHLKSMPWEYSD 100
Query: 96 SIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKY 150
I DYV+G TTC LFLS+KYH L P+Y+ RI+ L Y L+ +D + L+
Sbjct: 101 -IPADYVLGTTTCLLFLSLKYHRLHPEYVYTRIRNLQGKYNLRILLTMIDIPNHEDPLRE 159
Query: 151 LTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
L++ ++ ++T++ WS EA +E YK +E+ D I KQ + +F
Sbjct: 160 LSKTSMVNNVTIVCCWSAAEAARYLELYKAYEHASFDAIRGKQSSSYAERLVDF 213
>gi|322698863|gb|EFY90630.1| mating-type switching protein swi10 [Metarhizium acridum CQMa 102]
Length = 416
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 97/175 (55%), Gaps = 10/175 (5%)
Query: 38 KTWNFDPVPAAQNSATSESVQPSRAG---ASKSSNAILVNPRQKGNPLLKHIGKVPWEYD 94
K D P ++ S +S VQP+ + ILV+PRQ+GNP+L I +PWEY
Sbjct: 40 KPQQMDKAPPSKASGSS-VVQPTPQALPQKQTGGSTILVSPRQRGNPVLTSIRSLPWEYS 98
Query: 95 DSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALK 149
D I D+VMG TTCALFLS+KYH L P+YI RI+ L Y L+ VD + L+
Sbjct: 99 D-IPADFVMGLTTCALFLSLKYHRLHPEYIYTRIRNLQGKYNLRILLTMVDIPNHEDCLR 157
Query: 150 YLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
L++ L+ ++T++L WS EAG +E YK +EN I +Q K +F
Sbjct: 158 ELSKTSLVNNVTIILCWSAAEAGRYLELYKSYENASFAAIRGQQASSYADKLVDF 212
>gi|240279976|gb|EER43480.1| mating-type switching protein swi10 [Ajellomyces capsulatus H143]
gi|325088693|gb|EGC42003.1| mating-type switching protein swi10 [Ajellomyces capsulatus H88]
Length = 361
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+ S +ILV+ RQ+GNP+L H+ VPWE+ D I DY++G TTC LFLS+KY+
Sbjct: 48 PSRSSPS----SILVSARQRGNPILNHVRHVPWEFAD-IPADYIVGSTTCVLFLSLKYYR 102
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RIK L Y L+ +D + +L+ L++ L+ +LTL+L WS EAG
Sbjct: 103 LHPEYIYSRIKGLAGKYNLRILLTLIDIPNHEDSLRELSKTSLVNNLTLILCWSAAEAGH 162
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E +K E+ P I +Q
Sbjct: 163 YLELFKSCEHAQPTAIRTQQ 182
>gi|167515650|ref|XP_001742166.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778790|gb|EDQ92404.1| predicted protein [Monosiga brevicollis MX1]
Length = 194
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 83/129 (64%), Gaps = 5/129 (3%)
Query: 73 VNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALG 132
V+ RQK NPL+K + VP++ + PD++MG+TTCALFLS++YH L P+YI RI+ +G
Sbjct: 1 VSLRQKDNPLIKELRNVPFQLVSDVTPDFIMGKTTCALFLSLRYHNLHPEYIHARIREVG 60
Query: 133 KLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPD 187
+LY L QVD + + L ++C++ D TL++A S EA +E YK FENK +
Sbjct: 61 RLYALRVLLVQVDVRHAQSVISDLAKLCVMHDYTLIVAGSIREAARYLELYKSFENKSAE 120
Query: 188 LIMEKQDVD 196
L+ ++ D
Sbjct: 121 LLQGEKPAD 129
>gi|403299027|ref|XP_003940294.1| PREDICTED: DNA excision repair protein ERCC-1 [Saimiri boliviensis
boliviensis]
Length = 321
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 84/134 (62%), Gaps = 12/134 (8%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
SN+I+V+PRQ K + P + + V+G T LS++YH L PDYI R
Sbjct: 151 SNSIIVSPRQVRRETEKGALRFP-------VGNAVLGMTPVEGGLSLRYHNLHPDYIHAR 203
Query: 128 IKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+++LGK + L QVD KDP ALK L ++C+L D TL+LAWSPEEAG +ETYK +E
Sbjct: 204 LQSLGKTFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYE 263
Query: 183 NKPPDLIMEKQDVD 196
KP DL+MEK + D
Sbjct: 264 QKPADLLMEKLEQD 277
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 244 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 277
>gi|409080661|gb|EKM81021.1| hypothetical protein AGABI1DRAFT_71740 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 253
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 88/138 (63%), Gaps = 6/138 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S N I+VNP Q+GNP+L+ I V E+ D I DY +GRTT LFLS++YH L P+YI
Sbjct: 14 SGNNIIVNPCQRGNPVLECIRNVGKEFGD-IAADYQVGRTTGVLFLSLRYHRLHPEYIHS 72
Query: 127 RIKALGKLYK-----LQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
R++ LG Y + D + ++ LT+ CL+ ++T+++A+S +E G + YK F
Sbjct: 73 RVEKLGHSYDHRFLLILCDITEHRDPIRELTKSCLINNITIIVAFSNDEVGHYLSVYKQF 132
Query: 182 ENKPPDLIMEKQDVDPHS 199
E+KPPD+I E+ D D H+
Sbjct: 133 ESKPPDMIKERVDKDYHA 150
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHS 37
++A+S +E G + YK FE+KPPD+I E+ D D H+
Sbjct: 114 IVAFSNDEVGHYLSVYKQFESKPPDMIKERVDKDYHA 150
>gi|426197575|gb|EKV47502.1| hypothetical protein AGABI2DRAFT_204704 [Agaricus bisporus var.
bisporus H97]
Length = 253
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 90/141 (63%), Gaps = 12/141 (8%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S N I+VNP Q+GNP+L+ I V E+ D I DY +GRTT LFLS++YH L P+YI
Sbjct: 14 SGNNIIVNPCQRGNPVLECIRNVGKEFGD-IAADYQVGRTTGVLFLSLRYHRLHPEYIHS 72
Query: 127 RIKALGKLYKLQ--------VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETY 178
R++ LG Y + + +DP ++ LT+ CL+ ++T+++A+S +E G + Y
Sbjct: 73 RVEKLGHSYDRRFLLILCDITEHRDP---IRELTKSCLINNITIIVAFSNDEVGHYLSVY 129
Query: 179 KVFENKPPDLIMEKQDVDPHS 199
K FE+KPPD+I E+ D D H+
Sbjct: 130 KQFESKPPDMIKERVDKDYHA 150
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHS 37
++A+S +E G + YK FE+KPPD+I E+ D D H+
Sbjct: 114 IVAFSNDEVGHYLSVYKQFESKPPDMIKERVDKDYHA 150
>gi|302408192|ref|XP_003001931.1| mating-type switching protein swi10 [Verticillium albo-atrum
VaMs.102]
gi|261359652|gb|EEY22080.1| mating-type switching protein swi10 [Verticillium albo-atrum
VaMs.102]
Length = 414
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 98/172 (56%), Gaps = 9/172 (5%)
Query: 41 NFDPVPAAQNSATS-ESVQPSRAGASK--SSNAILVNPRQKGNPLLKHIGKVPWEYDDSI 97
D P A SAT + VQP+ K S +AI V+PRQ+GNP+L + +PWEY D I
Sbjct: 54 RLDKAPPASASATGGKVVQPTPQALPKRSSGSAIQVSPRQRGNPVLASLRSLPWEYSD-I 112
Query: 98 IPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLT 152
D+V+G TTCALFLS+KYH L P+YI RI+ L Y L+ VD + +L+ L+
Sbjct: 113 PADFVLGLTTCALFLSLKYHRLHPEYIYQRIRNLQGKYNLRIILAMVDIPNHEDSLRELS 172
Query: 153 RVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
+ L+ ++T++L WS EA +E YK +E+ I +Q K +F
Sbjct: 173 KTSLVSNVTVILCWSAAEAARYLELYKSYEHANFSAIRGQQSSSYAEKLVDF 224
>gi|367029673|ref|XP_003664120.1| hypothetical protein MYCTH_2306581 [Myceliophthora thermophila ATCC
42464]
gi|347011390|gb|AEO58875.1| hypothetical protein MYCTH_2306581 [Myceliophthora thermophila ATCC
42464]
Length = 381
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 95/158 (60%), Gaps = 11/158 (6%)
Query: 46 PAAQNSATS---ESVQPSRAG--ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPD 100
PA + S+ S + VQP+ A S + ILV+PRQKGNP+L + VPWEY D I D
Sbjct: 50 PANRTSSGSGPPKVVQPAPQALPARGSGSTILVSPRQKGNPVLACLKSVPWEYSD-IPAD 108
Query: 101 YVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVC 155
Y +G TTCALFLS+KYH L P+YI RI+ L Y L+ VD + AL+ L++
Sbjct: 109 YGLGLTTCALFLSLKYHRLHPEYIYTRIRNLRGKYNLRILLTLVDIPNHEDALRELSKTS 168
Query: 156 LLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
L+ D+T++LAWS EA +E YK +E+ I +Q
Sbjct: 169 LVNDVTVILAWSAAEAARYLELYKSYEHAGFAAIRGQQ 206
>gi|346977002|gb|EGY20454.1| mating-type switching protein swi10 [Verticillium dahliae VdLs.17]
Length = 408
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 98/166 (59%), Gaps = 8/166 (4%)
Query: 46 PAAQNSATSESVQPSRAGASK--SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVM 103
PA+ +++ + VQP+ K S +AI V+PRQ+GNP+L + +PWEY D I D+V+
Sbjct: 60 PASASASGGKVVQPTPQALPKRSSGSAIQVSPRQRGNPVLASLRSLPWEYSD-IPADFVL 118
Query: 104 GRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLC 158
G TTCALFLS+KYH L P+YI RI+ L Y L+ VD + +L+ L++ L+
Sbjct: 119 GLTTCALFLSLKYHRLHPEYIYQRIRNLQGKYNLRIILAMVDIPNHEDSLRELSKTSLVS 178
Query: 159 DLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
++T++L WS EA +E YK +E+ I +Q K +F
Sbjct: 179 NVTVILCWSAAEAARYLELYKSYEHANFSAIRGQQSSSYAEKLVDF 224
>gi|340521339|gb|EGR51574.1| hypothetical protein TRIREDRAFT_57198 [Trichoderma reesei QM6a]
Length = 329
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 79/120 (65%), Gaps = 6/120 (5%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
+ ILV+PRQ+GNP+L I +PWEY D I DYV+G TTCALFLS+KYH L P+YI RI
Sbjct: 51 STILVSPRQRGNPVLTSIRSIPWEYSD-IPADYVLGLTTCALFLSLKYHRLHPEYIYTRI 109
Query: 129 KALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
+ L Y L+ VD + +L+ L++ ++ ++T+ML WS EA +E YK +EN
Sbjct: 110 RNLQGKYNLRILLTLVDIPNHEDSLRELSKTSVVNNVTVMLCWSAAEAARYLELYKSYEN 169
>gi|116202479|ref|XP_001227051.1| hypothetical protein CHGG_09124 [Chaetomium globosum CBS 148.51]
gi|88177642|gb|EAQ85110.1| hypothetical protein CHGG_09124 [Chaetomium globosum CBS 148.51]
Length = 363
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 95/153 (62%), Gaps = 8/153 (5%)
Query: 48 AQNSATSESVQPSRAG--ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGR 105
A +SAT + VQP+ A S ++ILV+PRQKGNP+L + V WEY D I+ DY +G+
Sbjct: 51 ASSSATPKVVQPTPQALPARGSGSSILVSPRQKGNPVLACLKSVAWEYSD-ILADYGLGQ 109
Query: 106 TTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDL 160
TTCAL+L +YH L P+YI R++ L YKL+ VD + AL+ L++ L+ ++
Sbjct: 110 TTCALYLRPQYHRLHPEYIYTRVRNLQGKYKLRIVLTMVDIPNHEDALRELSKTSLVHNV 169
Query: 161 TLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
T++LAWS EA +E YK +E+ I +Q
Sbjct: 170 TIILAWSAAEAARYLELYKSYEHAGFGAIRGQQ 202
>gi|115398365|ref|XP_001214774.1| mating-type switching protein swi10 [Aspergillus terreus NIH2624]
gi|114192965|gb|EAU34665.1| mating-type switching protein swi10 [Aspergillus terreus NIH2624]
Length = 334
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 81/130 (62%), Gaps = 6/130 (4%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
+AILV+ RQKGNP+L I VPWEY D I DYV+G TTCALFLS+KYH L P+YI RI
Sbjct: 56 SAILVSTRQKGNPILDFIKIVPWEYAD-IPADYVVGTTTCALFLSLKYHRLHPEYIYSRI 114
Query: 129 KALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
+ L Y L+ VD + +LK L++ L+ +LTL+L WS EA +E +K E
Sbjct: 115 RQLAGKYLLRILLIIVDIPNHEDSLKELSKTSLVNNLTLVLCWSAPEAAHYLELFKSSEK 174
Query: 184 KPPDLIMEKQ 193
P I +Q
Sbjct: 175 SQPTAIRTQQ 184
>gi|328851214|gb|EGG00371.1| hypothetical protein MELLADRAFT_39770 [Melampsora larici-populina
98AG31]
Length = 191
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
Query: 76 RQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLY 135
RQKGNP+L + VPWE+ D I+ DY +G TT LFLS++YH L P+YI RI LG+ Y
Sbjct: 1 RQKGNPILNLLQSVPWEHGD-IVCDYQVGLTTGLLFLSLRYHKLHPEYIHTRIGKLGQSY 59
Query: 136 KLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIM 190
L++ D +D +++ +T+V + LT+ LAWS EA I+ +K FE KPPDLI
Sbjct: 60 NLRILLILCDVEDHELSIREITKVSVTNQLTVFLAWSNAEAARYIQLFKSFERKPPDLIK 119
Query: 191 EKQD 194
E+ D
Sbjct: 120 ERSD 123
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQD 32
LAWS EA I+ +K FE KPPDLI E+ D
Sbjct: 92 FLAWSNAEAARYIQLFKSFERKPPDLIKERSD 123
>gi|367040147|ref|XP_003650454.1| hypothetical protein THITE_2109933 [Thielavia terrestris NRRL 8126]
gi|346997715|gb|AEO64118.1| hypothetical protein THITE_2109933 [Thielavia terrestris NRRL 8126]
Length = 367
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 8/157 (5%)
Query: 44 PVPAAQNSATSESVQPSRAG--ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDY 101
P A+ +S + VQP+ S ++ILV+PRQKGNP+L + V WEY D I DY
Sbjct: 53 PSNASASSGGPKVVQPTPQALPGRGSGSSILVSPRQKGNPVLSCLKSVAWEYSD-IPADY 111
Query: 102 VMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCL 156
+G+TTCALFLS+KYH L P+YI RI+ L Y L+ VD + AL+ L++ L
Sbjct: 112 GLGQTTCALFLSLKYHRLHPEYIYTRIRNLQGRYNLRVLLTLVDIPNHEDALRELSKTSL 171
Query: 157 LCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
+ +T++LAWS EA +E YK +E+ I +Q
Sbjct: 172 VNRVTVVLAWSAAEAARYLELYKAYEHAGFAAIRGQQ 208
>gi|402085306|gb|EJT80204.1| mating-type switching protein swi10 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 398
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 79/122 (64%), Gaps = 6/122 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S +AILV+PRQK NP+L I +PWEY D I DY +G TTCALFLS+KYH L P+YI
Sbjct: 95 SGSAILVSPRQKNNPVLTWIKSIPWEYSD-IPADYGLGLTTCALFLSLKYHRLHPEYIYT 153
Query: 127 RIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RI+ L Y L+ VD AL+ L++ L+ ++TL+L WS +EA +E YK +
Sbjct: 154 RIRNLQGKYTLRVLLTMVDVPSHEDALRELSKTALVNNVTLVLCWSAQEAARYLELYKSY 213
Query: 182 EN 183
E+
Sbjct: 214 EH 215
>gi|356574927|ref|XP_003555594.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-1-like [Glycine max]
Length = 264
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 82/128 (64%), Gaps = 6/128 (4%)
Query: 78 KGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL 137
KGNPLLKHI V W + D ++ DY++G+++CAL+LS++YH L PDY+ RI+ L K +KL
Sbjct: 8 KGNPLLKHIRNVRWAFAD-VVCDYLLGQSSCALYLSLRYHLLHPDYLFYRIRKLQKNFKL 66
Query: 138 Q-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEK 192
+ V +D L +T+ LL D TL+ WS EE G +ET KV ENKP D+I +
Sbjct: 67 RVVLCHVGVEDVIKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVXENKPADIIQGQ 126
Query: 193 QDVDPHSK 200
D D S+
Sbjct: 127 MDTDYLSR 134
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
+ WS EE G +ET KV ENKP D+I + D D S+
Sbjct: 97 LCGWSLEECGRYLETIKVXENKPADIIQGQMDTDYLSR 134
>gi|302895863|ref|XP_003046812.1| hypothetical protein NECHADRAFT_33938 [Nectria haematococca mpVI
77-13-4]
gi|256727739|gb|EEU41099.1| hypothetical protein NECHADRAFT_33938 [Nectria haematococca mpVI
77-13-4]
Length = 324
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 88/150 (58%), Gaps = 8/150 (5%)
Query: 51 SATSESVQPSRAG--ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTC 108
S + VQP+ +S + ILV+PRQ+GNP+L I +PWEY D I D+V+G TC
Sbjct: 38 SGAGKVVQPTPQALPQKQSGSTILVSPRQRGNPVLTSIRSMPWEYSD-IPADFVLGLGTC 96
Query: 109 ALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLM 163
ALFLS+KYH L P+YI RI+ L Y L+ VD + LK L++ L+ ++TL+
Sbjct: 97 ALFLSLKYHRLHPEYIYTRIRNLQGKYNLRVLLTMVDIPNHEANLKELSKTSLVNNVTLI 156
Query: 164 LAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
L WS EA +E YK +EN I +Q
Sbjct: 157 LCWSAAEAARYLELYKSYENASFGAIRGQQ 186
>gi|358391140|gb|EHK40544.1| hypothetical protein TRIATDRAFT_320874 [Trichoderma atroviride IMI
206040]
Length = 398
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 83/139 (59%), Gaps = 6/139 (4%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
ILV+PRQ+GNP+L I +PWEY D I DYV+G TTC LFLS+KYH L P+YI RI+
Sbjct: 75 ILVSPRQRGNPVLTSIRSIPWEYSD-IPADYVVGLTTCVLFLSLKYHRLHPEYIYTRIRN 133
Query: 131 LGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKP 185
L Y L+ VD + +++ L++ ++ ++T++L WS EA +E YK +EN
Sbjct: 134 LQGKYNLRILLTLVDIPNHEDSIRELSKTSVVNNVTVILCWSAAEAARYLELYKSYENAN 193
Query: 186 PDLIMEKQDVDPHSKTWNF 204
I +Q + K F
Sbjct: 194 FSAIRGQQSTNYADKLVEF 212
>gi|440639420|gb|ELR09339.1| hypothetical protein GMDG_03905 [Geomyces destructans 20631-21]
Length = 247
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 93/155 (60%), Gaps = 8/155 (5%)
Query: 46 PAAQNSATSESVQPSRAGA--SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVM 103
PA ++++ VQP+ S +AI V+ RQKGNP+L ++ PWE+ D+ DYV+
Sbjct: 40 PATTTPSSTKIVQPTPQALPLRSSGSAIYVSHRQKGNPMLAYLRAQPWEWRDTPA-DYVL 98
Query: 104 GRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLC 158
G TTCALFLS+KYH L P+Y+ +RI+ LG Y L+ VD + ++K L++ L+
Sbjct: 99 GATTCALFLSLKYHRLHPEYVYNRIRGLGGKYALRVLLTLVDIPNHEESVKELSKTGLVN 158
Query: 159 DLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
++T++L WS E +E YK FE+ IM Q
Sbjct: 159 NVTIILCWSAAEGARYLELYKGFEHASAAGIMGVQ 193
>gi|301100660|ref|XP_002899419.1| DNA excision repair protein ERCC-1 [Phytophthora infestans T30-4]
gi|262103727|gb|EEY61779.1| DNA excision repair protein ERCC-1 [Phytophthora infestans T30-4]
Length = 308
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 97/176 (55%), Gaps = 17/176 (9%)
Query: 35 PHSKTWNFDPVPAAQNSATSESVQP----SRAGASKSSNAILVNPRQKGNPLLKHIGKVP 90
P S T+N AQ TS V P + A ++ I VN RQKGNP+LK + V
Sbjct: 68 PSSLTFN---EAFAQLRKTSSYVAPPPQEDKPPARDAAATIYVNRRQKGNPMLKSVRNVG 124
Query: 91 WEYDDSIIPDYVMGRTT-CALFLSIKYHALKPDYIADRIKAL---------GKLYKLQVD 140
E+ D +IPDYVMG ++ C LFLS++YH L Y+ +R++++ KL VD
Sbjct: 125 LEFRDGLIPDYVMGESSCCVLFLSVRYHLLHNSYLDERVQSVRKDDPTHYKTKLVLCFVD 184
Query: 141 SKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 196
D AL+ + RV LL TL+LAWS EA +ET+K +ENK +I EK + +
Sbjct: 185 VDDNEVALREVNRVALLSGFTLVLAWSWLEAARYLETFKAYENKSATIIKEKVEAE 240
>gi|260824255|ref|XP_002607083.1| hypothetical protein BRAFLDRAFT_118676 [Branchiostoma floridae]
gi|229292429|gb|EEN63093.1| hypothetical protein BRAFLDRAFT_118676 [Branchiostoma floridae]
Length = 427
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 70/99 (70%), Gaps = 5/99 (5%)
Query: 111 FLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLA 165
F S++YH L P+YI DR++ LG+ Y L QVD DPHH+LK L ++C+L D TL+LA
Sbjct: 262 FHSLRYHHLHPNYIQDRLQQLGRSYMLRILLVQVDVADPHHSLKELAKMCILADCTLILA 321
Query: 166 WSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
WS EEAG+ +ETYK +E+KP DLI EK D D SK +F
Sbjct: 322 WSAEEAGKYLETYKAYESKPADLIKEKTDKDYLSKATDF 360
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 42
+LAWS EEAG+ +ETYK +E+KP DLI EK D D SK +F
Sbjct: 319 ILAWSAEEAGKYLETYKAYESKPADLIKEKTDKDYLSKATDF 360
>gi|320590234|gb|EFX02677.1| mating-type switching protein swi10 [Grosmannia clavigera kw1407]
Length = 366
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 75/122 (61%), Gaps = 6/122 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S + ILV+PRQK NP+L + V WEY D I+ DY +G TTCALFLS+KYH L P+YI
Sbjct: 100 SGSTILVSPRQKNNPVLSQLRTVAWEYSD-IVADYGLGTTTCALFLSLKYHRLHPEYIYA 158
Query: 127 RIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RI+ L Y+L+ VD L+ L + L+ +TL+L WS EA +E YK F
Sbjct: 159 RIQGLQGRYQLRVLLTLVDIDGHEEPLRELAKTSLVNQMTLLLCWSVAEAARYLELYKTF 218
Query: 182 EN 183
E+
Sbjct: 219 EH 220
>gi|336266030|ref|XP_003347785.1| hypothetical protein SMAC_03883 [Sordaria macrospora k-hell]
gi|380091320|emb|CCC11177.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 416
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 77/124 (62%), Gaps = 6/124 (4%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
ILV+PRQKGNP+L I WEY D I DYV+G TTC LFLS+KYH L P+YI RI+A
Sbjct: 94 ILVSPRQKGNPVLASIKSTAWEYSD-IPSDYVLGSTTCCLFLSLKYHRLHPEYIYTRIRA 152
Query: 131 LGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKP 185
L Y L+ VD + L+ L++ L+ ++T++L WS +EA +E YK +E+
Sbjct: 153 LQNRYSLRILLTLVDIPNHEEPLRELSKTSLVNNVTVILCWSAQEAARYLELYKSYEHAS 212
Query: 186 PDLI 189
I
Sbjct: 213 AAAI 216
>gi|449016198|dbj|BAM79600.1| similar to DNA excision repair protein ERCC-1 [Cyanidioschyzon
merolae strain 10D]
Length = 346
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 20/143 (13%)
Query: 65 SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYI 124
++S + ILV+ Q+GNPLLKH VPW++ + D+++G TCA FLS+K+H L+PDYI
Sbjct: 108 AQSKSHILVSLTQRGNPLLKHFRDVPWKFGEFRFADFLLGSYTCAFFLSMKFHLLRPDYI 167
Query: 125 ADRIKALGKL-YKLQV-------------------DSKDPHHALKYLTRVCLLCDLTLML 164
DR++ LG+ ++L++ D L L ++CL+ +LTLM+
Sbjct: 168 YDRVRKLGRRSFRLRILLLLMDSEGGVFFGSGASEDGIPEGSPLAKLEKMCLIQELTLMV 227
Query: 165 AWSPEEAGEMIETYKVFENKPPD 187
AW+ +EA ++E+YKV E K D
Sbjct: 228 AWNLDEAARILESYKVQEGKASD 250
>gi|224003765|ref|XP_002291554.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973330|gb|EED91661.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 191
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 79/126 (62%), Gaps = 6/126 (4%)
Query: 76 RQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLY 135
RQ+GNP+L HI VP+++ ++PDY+ T CAL+LS++YH L P+YI RI L +
Sbjct: 3 RQRGNPILAHIRNVPYQFS-PMVPDYIFATTRCALYLSLRYHNLHPNYIHRRIAELKSDF 61
Query: 136 KLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIM 190
+L+V D D L +L +C+ +LTL+LAWS EEA +ET+K FE K LI
Sbjct: 62 ELRVLLCHVDLDDNASVLLFLNDLCVQNNLTLILAWSEEEAARYVETFKAFEGKDASLIQ 121
Query: 191 EKQDVD 196
+K+ +
Sbjct: 122 KKEHTN 127
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWS EEA +ET+K FE K LI +K+ +
Sbjct: 94 ILAWSEEEAARYVETFKAFEGKDASLIQKKEHTN 127
>gi|358053841|dbj|GAA99973.1| hypothetical protein E5Q_06676 [Mixia osmundae IAM 14324]
Length = 822
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 15/166 (9%)
Query: 44 PVPAAQNSATSESVQPSRAGAS--------KSSNAILVNPRQKGNPLLKHIGKVPWEYDD 95
P + +++ +V P A S +S+N ILV+ +QKGN + HI VPWE+ D
Sbjct: 576 PAEVSIGASSGVAVTPGTATVSSAHKRVVQQSTNNILVSTKQKGNRCINHI-TVPWEHSD 634
Query: 96 SIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKY 150
I+ D+ +G TT LFLSIKYH L+P YI RI+ALG+ Y L QVD+ ++
Sbjct: 635 -IMADFQVGTTTGVLFLSIKYHKLEPAYIYGRIEALGQAYNLRILLVQVDADTSDDVMRE 693
Query: 151 LTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 196
LTR+ + T+M+ S +EAG ++ YK E +PPD + + + D
Sbjct: 694 LTRISITNAYTIMICSSSQEAGRILSKYKKQERRPPDALKARPETD 739
>gi|213406491|ref|XP_002174017.1| mating-type switching protein swi10 [Schizosaccharomyces japonicus
yFS275]
gi|212002064|gb|EEB07724.1| mating-type switching protein swi10 [Schizosaccharomyces japonicus
yFS275]
Length = 251
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 87/150 (58%), Gaps = 20/150 (13%)
Query: 65 SKSSN-AILVNPRQ-----KGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
SKS N +LV+ RQ KGNPLL EY + I+PD+VMG TCALFLS+KYH
Sbjct: 35 SKSVNHNVLVSFRQVGSLLKGNPLL--------EYSE-IVPDFVMGAKTCALFLSLKYHH 85
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
+ P+YI RI LGK Y+L+ VD ++ +++ L + ++ TL+LAWS EA
Sbjct: 86 VHPEYIYSRIGKLGKAYELRILLAVVDVENHRESIQELVKTSVVNRYTLILAWSSAEAAR 145
Query: 174 MIETYKVFENKPPDLIMEKQDVDPHSKTWN 203
IETYK FE P IME+ D + N
Sbjct: 146 YIETYKAFEFAAPTNIMERPSTDYLERVQN 175
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWN 41
+LAWS EA IETYK FE P IME+ D + N
Sbjct: 135 ILAWSSAEAARYIETYKAFEFAAPTNIMERPSTDYLERVQN 175
>gi|325194039|emb|CCA28137.1| DNA excision repair protein ERCC1 putative [Albugo laibachii Nc14]
Length = 293
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 95/174 (54%), Gaps = 18/174 (10%)
Query: 46 PAAQNSAT-SESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVM- 103
P + +S+T +E++ S AS + + VN Q GNPLLKH+ V EY D +IPDYV+
Sbjct: 65 PYSNDSSTKAENLTTSTLDASVT---VQVNRCQTGNPLLKHMQNVVCEYRDGLIPDYVLF 121
Query: 104 ----GRTTCALFLSIKYHALKPDYIADRIKAL---------GKLYKLQVDSKDPHHALKY 150
TC LFLSI++H L Y+ +RI + K+ VD +D AL
Sbjct: 122 NANENTNTCILFLSIRFHLLHGSYLEERIGKIQRDDVTSYRNKIVICYVDIEDYVVALLE 181
Query: 151 LTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 204
+ RV LL TL+L+WS +EA IET+K +E KP LI E+ + D S+ N
Sbjct: 182 INRVTLLSQFTLVLSWSWQEAARYIETFKTYEQKPASLIQERVETDFLSQANNL 235
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNF 42
+L+WS +EA IET+K +E KP LI E+ + D S+ N
Sbjct: 194 VLSWSWQEAARYIETFKTYEQKPASLIQERVETDFLSQANNL 235
>gi|242766034|ref|XP_002341093.1| mating-type switch/DNA repair protein Swi10/Rad10, putative
[Talaromyces stipitatus ATCC 10500]
gi|218724289|gb|EED23706.1| mating-type switch/DNA repair protein Swi10/Rad10, putative
[Talaromyces stipitatus ATCC 10500]
Length = 310
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 80/137 (58%), Gaps = 22/137 (16%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
P+RA S AILV+ RQKGNP+L H+ VPWEY D I DYV+G TTCALFLS+KYH
Sbjct: 31 PNRAAPS----AILVSSRQKGNPILNHVKLVPWEYAD-IPADYVLGATTCALFLSLKYHR 85
Query: 119 LKPDYIADRIKALGKLYKLQVDSKDPHH--ALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
L P+YI I P+H LK L++ ++ ++TL+L WS EA +E
Sbjct: 86 LHPEYIYSHI---------------PNHEETLKELSKTSIVNNVTLILCWSAPEAAHYLE 130
Query: 177 TYKVFENKPPDLIMEKQ 193
+K EN P I +Q
Sbjct: 131 LFKSSENAQPTAIRSQQ 147
>gi|85096839|ref|XP_960331.1| mating-type switching protein swi10 [Neurospora crassa OR74A]
gi|28921819|gb|EAA31095.1| mating-type switching protein swi10 [Neurospora crassa OR74A]
Length = 405
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 7/129 (5%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
ILV+PRQKGNP+L I WEY D I DYV+G TTCALFLS+KYH L P+YI RI+
Sbjct: 87 ILVSPRQKGNPVLASIKSTAWEYSD-IPADYVLGTTTCALFLSLKYHRLHPEYIYTRIRL 145
Query: 131 LGK-LYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
L + Y L+ VD + L+ L++ L+ ++T++L WS +EA +E YK +E+
Sbjct: 146 LQQNRYNLRILLTLVDIPNHEEPLRELSKTSLVNNVTVILCWSAQEAARYLELYKSYEHA 205
Query: 185 PPDLIMEKQ 193
I +Q
Sbjct: 206 SASAIRGQQ 214
>gi|336465807|gb|EGO53972.1| hypothetical protein NEUTE1DRAFT_68281 [Neurospora tetrasperma FGSC
2508]
gi|350287360|gb|EGZ68607.1| DNA repair protein rad10, partial [Neurospora tetrasperma FGSC
2509]
Length = 300
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 7/129 (5%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
ILV+PRQKGNP+L I WEY D I DYV+G TTCALFLS+KYH L P+YI RI+
Sbjct: 81 ILVSPRQKGNPVLASIKSTAWEYSD-IPADYVLGTTTCALFLSLKYHRLHPEYIYTRIRL 139
Query: 131 LGK-LYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
L + Y L+ VD + L+ L++ L+ ++T++L WS +EA +E YK +E+
Sbjct: 140 LQQNRYNLRILLTLVDIPNHEEPLRELSKTSLVNNVTVILCWSAQEAARYLELYKSYEHA 199
Query: 185 PPDLIMEKQ 193
I +Q
Sbjct: 200 SASAIRGQQ 208
>gi|440471052|gb|ELQ40089.1| mating-type switching protein swi10 [Magnaporthe oryzae Y34]
gi|440481374|gb|ELQ61967.1| mating-type switching protein swi10 [Magnaporthe oryzae P131]
Length = 478
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 95/167 (56%), Gaps = 30/167 (17%)
Query: 46 PAAQNSATSESVQPS-RAGASKSS-NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVM 103
P A N ++ VQP+ +A SKSS ++ILV+PRQK NP+L+ I VPWEY D I DYV+
Sbjct: 115 PPAANGGAAKIVQPTPQALPSKSSGSSILVSPRQKSNPVLEWIKSVPWEYSD-IPADYVL 173
Query: 104 GRTTCALFL----------------------SIKYHALKPDYIADRIKALGKLYKLQ--- 138
G TTCALFL S+KYH L P+YI RI+ L + ++
Sbjct: 174 GLTTCALFLRRTYQEFELMNPCYLFSSSSSYSLKYHRLHPEYIYTRIRNLQGKFNMRILL 233
Query: 139 --VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
VD + AL+ L++ L+ D+TLML WS EA +E YK +E+
Sbjct: 234 TMVDIPNHEEALRELSKTSLVNDVTLMLCWSSHEAARYLELYKSYEH 280
>gi|302680174|ref|XP_003029769.1| hypothetical protein SCHCODRAFT_42481 [Schizophyllum commune H4-8]
gi|300103459|gb|EFI94866.1| hypothetical protein SCHCODRAFT_42481, partial [Schizophyllum
commune H4-8]
Length = 185
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Query: 78 KGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKL 137
+GNP+L+ I V EY D I+ D+ +GRTT LFLS+KYH L P+Y+ RI+ LG Y L
Sbjct: 1 RGNPVLEAIKHVGKEYGD-IVADFQVGRTTGVLFLSLKYHRLHPEYVHSRIEKLGHSYTL 59
Query: 138 QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDP 197
++ L++ CL+ ++T+++A+S +EAG + T+K FEN+PPD+I E+ D D
Sbjct: 60 RILLILCDVVSALLSQTCLINNITVIVAFSVDEAGHYLATFKQFENRPPDMIKERVDKDY 119
Query: 198 HS 199
+S
Sbjct: 120 NS 121
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHS 37
++A+S +EAG + T+K FEN+PPD+I E+ D D +S
Sbjct: 85 IVAFSVDEAGHYLATFKQFENRPPDMIKERVDKDYNS 121
>gi|346326072|gb|EGX95668.1| mating-type switching protein swi10 [Cordyceps militaris CM01]
Length = 388
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 86/145 (59%), Gaps = 17/145 (11%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRT-TCALFLSIKYH 117
P R GAS ILV+PRQ+GNP+L HI +PWEY D I DY++G T T LFLS+KYH
Sbjct: 72 PQRQGASN----ILVSPRQRGNPVLTHIKSMPWEYSD-IPADYILGVTMTAVLFLSLKYH 126
Query: 118 ALKPDYIADRIKALGKLYKLQV--------DSKDPHHALKYLTRVCLLCDLTLMLAWSPE 169
L P+Y+ RI+ L Y L++ + +DP L+ L++ ++ ++T++ WS
Sbjct: 127 RLHPEYVYTRIRNLQGKYNLRILLTMIDIPNHEDP---LRELSKTSMVNNVTIISCWSAA 183
Query: 170 EAGEMIETYKVFENKPPDLIMEKQD 194
EA +E YK +E+ + I KQ
Sbjct: 184 EAARYLELYKAYEHASFEAIRGKQS 208
>gi|395854326|ref|XP_003799647.1| PREDICTED: DNA excision repair protein ERCC-1 [Otolemur garnettii]
Length = 239
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 73/102 (71%), Gaps = 9/102 (8%)
Query: 46 PAAQNSATSESVQPSRAGASKS--------SNAILVNPRQKGNPLLKHIGKVPWEYDDSI 97
PA AT + S+AG + + SN+I+V+PRQ+GNP+LK + VPWE+ D +
Sbjct: 68 PAGGAGATYPTGSESQAGETPNQAPKPGAKSNSIIVSPRQRGNPVLKFVRNVPWEFGD-V 126
Query: 98 IPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQV 139
IPDYV+G++TCALFLS++YH L PDYI +R+++LGK + L+V
Sbjct: 127 IPDYVLGQSTCALFLSLRYHNLHPDYIHERLQSLGKNFALRV 168
>gi|429859474|gb|ELA34254.1| mating-type switching protein swi10 [Colletotrichum gloeosporioides
Nara gc5]
Length = 434
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 25/151 (16%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFL-------------- 112
SS+AI+V+PRQ+GNP+L + +PWEY D I DY +G TTCALFL
Sbjct: 86 SSSAIMVSPRQRGNPVLASLKSMPWEYSD-IAADYALGLTTCALFLRLVRYAFHVVFAAI 144
Query: 113 -----SIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTL 162
S+KYH L P+YI RI+ L Y L+ VD + L+ L++ L+ ++T+
Sbjct: 145 FLTTPSLKYHRLHPEYIYTRIRNLQGKYNLRILLTMVDIPNHEEVLRELSKTSLVNNVTI 204
Query: 163 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 193
+L WS EA +E YK +E+ + I +Q
Sbjct: 205 ILCWSAAEAARYLELYKSYEHANFNAIRGQQ 235
>gi|426243944|ref|XP_004015800.1| PREDICTED: DNA excision repair protein ERCC-1 [Ovis aries]
Length = 284
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Query: 115 KYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPE 169
+YH L PDYI R+++LGK Y L QVD KDP ALK L ++C+L D TL+LAWSPE
Sbjct: 130 RYHNLHPDYIHQRLQSLGKSYALRVLLVQVDVKDPQKALKELAKMCILADCTLILAWSPE 189
Query: 170 EAGEMIETYKVFENKPPDLIMEKQDVD 196
EAG +ETYK +E KP DL+MEK + D
Sbjct: 190 EAGRYLETYKAYEQKPADLLMEKLEQD 216
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWSPEEAG +ETYK +E KP DL+MEK + D
Sbjct: 183 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQD 216
>gi|405121412|gb|AFR96181.1| mating-type switching protein swi10 [Cryptococcus neoformans var.
grubii H99]
Length = 395
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 87/146 (59%), Gaps = 9/146 (6%)
Query: 53 TSESVQP-SRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALF 111
TS++ +P +R ASKSS I+ N Q+ NP+L I V E D I+ DY +G LF
Sbjct: 88 TSQTSRPINRPAASKSS--IIYNAVQRRNPVLSAIRNVGIEVGD-IVADYQVGAHNGVLF 144
Query: 112 LSIKYHALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAW 166
LS+KYH L P+YI RI+ L +Y +V D + H +L+ LT++ ++ + T+ +AW
Sbjct: 145 LSLKYHRLHPEYIHQRIEKLKNMYNFRVILLLCDVNEHHQSLRELTKIAIINEFTIFVAW 204
Query: 167 SPEEAGEMIETYKVFENKPPDLIMEK 192
S EE + + T+K FE+K D + E+
Sbjct: 205 SNEEVAQYLVTFKQFEHKSADTLKER 230
>gi|441656301|ref|XP_003277689.2| PREDICTED: DNA excision repair protein ERCC-1 [Nomascus leucogenys]
Length = 195
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 66/94 (70%), Gaps = 5/94 (5%)
Query: 113 SIKYHALKPDYIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWS 167
S++YH L PDYI R+++LGK + L QVD KDP ALK L ++C+L D TL+LAWS
Sbjct: 40 SLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWS 99
Query: 168 PEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKT 201
PEEAG +ETYK +E KP DL+MEK + D S+
Sbjct: 100 PEEAGRYLETYKAYEQKPADLLMEKLEQDFASRV 133
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESV 57
+LAWSPEEAG +ETYK +E KP DL+MEK + D S+ + N S+++
Sbjct: 95 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFASRVTECLTTVKSVNKTDSQTL 151
>gi|67612623|ref|XP_667238.1| excision repair cross-complementing rodent repair
deficiency,complementation group 1 [Cryptosporidium
hominis TU502]
gi|54658355|gb|EAL37009.1| excision repair cross-complementing rodent repair
deficiency,complementation group 1 [Cryptosporidium
hominis]
Length = 224
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 86/143 (60%), Gaps = 9/143 (6%)
Query: 66 KSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIA 125
K+ I+ + RQ+GNP+L H+ VP+++ + I+PD+++G+ +F+SIKYH L Y+
Sbjct: 21 KAGEMIIASTRQRGNPILAHVCNVPYDFQN-IVPDFLVGKYDAVVFISIKYHKLHNQYLR 79
Query: 126 DRIKALGKLYKLQV--------DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIET 177
RI++L K YK+++ S A+ +T +C ++TL LAWSP+EAG ++ET
Sbjct: 80 KRIESLQKNYKVRILLCLVDIPPSGAIDAAILEITDICFDLNMTLFLAWSPKEAGHILET 139
Query: 178 YKVFENKPPDLIMEKQDVDPHSK 200
K EN ++I +D S+
Sbjct: 140 LKSHENSSSEIIRGGLSLDLFSR 162
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS 60
LAWSP+EAG ++ET K EN ++I +D S+ + N SE++
Sbjct: 125 FLAWSPKEAGHILETLKSHENSSSEIIRGGLSLDLFSRIRDALSSLPRINKTDSENLLKH 184
Query: 61 RAGASKSSNA 70
SK NA
Sbjct: 185 FGSISKVVNA 194
>gi|66475596|ref|XP_627614.1| ERCC1 excision repair 1; C-terminal HhH domain [Cryptosporidium
parvum Iowa II]
gi|46229292|gb|EAK90141.1| ERCC1 excision repair 1; C-terminal HhH domain [Cryptosporidium
parvum Iowa II]
Length = 240
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 86/143 (60%), Gaps = 9/143 (6%)
Query: 66 KSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIA 125
K+ I+ + RQ+GNP+L H+ VP+++ + I+PD+++G+ +F+SIKYH L Y+
Sbjct: 37 KAGEMIIASTRQRGNPILAHVCNVPYDFQN-IVPDFLVGKYDAVVFISIKYHKLHNQYLR 95
Query: 126 DRIKALGKLYKLQV--------DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIET 177
RI++L K YK+++ S A+ +T +C ++TL LAWSP+EAG ++ET
Sbjct: 96 KRIESLQKNYKVRILLCLVDIPPSGAIDAAILEVTDICFDLNMTLFLAWSPKEAGHILET 155
Query: 178 YKVFENKPPDLIMEKQDVDPHSK 200
K EN ++I +D S+
Sbjct: 156 LKSHENSSSEIIRGGLSLDLFSR 178
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS 60
LAWSP+EAG ++ET K EN ++I +D S+ + N SE++
Sbjct: 141 FLAWSPKEAGHILETLKSHENSSSEIIRGGLSLDLFSRIRDALSSLPRINKTDSENLLKH 200
Query: 61 RAGASKSSNA 70
SK NA
Sbjct: 201 FGSISKVVNA 210
>gi|50551627|ref|XP_503288.1| YALI0D25762p [Yarrowia lipolytica]
gi|49649156|emb|CAG81492.1| YALI0D25762p [Yarrowia lipolytica CLIB122]
Length = 370
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDS-IIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
AILVN Q+GN +L +I VPWEY ++ DYV G T+C LFLSIKYH++KP+YI +I
Sbjct: 168 AILVNKNQRGNKVLDYIKDVPWEYGAGDMVADYVTGSTSCVLFLSIKYHSIKPEYIYRKI 227
Query: 129 KALG------KLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
L K+ + +D ++ A++ LTR + DL +++AWS E+ G I K E
Sbjct: 228 AKLQKQQFDLKVLLVMIDKENHEAAIRELTRASMRHDLAILVAWSNEDCGNYISKLKSLE 287
Query: 183 NKPPDLIMEKQDVDPHSK 200
LI + D S+
Sbjct: 288 TATVKLIEGSKSKDYTSR 305
>gi|32398840|emb|CAD98550.1| excision repair cross-complementing rodent repair
deficiency,complementation group 1, possible
[Cryptosporidium parvum]
Length = 224
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 86/143 (60%), Gaps = 9/143 (6%)
Query: 66 KSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIA 125
K+ I+ + RQ+GNP+L H+ VP+++ + I+PD+++G+ +F+SIKYH L Y+
Sbjct: 21 KAGEMIIASTRQRGNPILAHVCNVPYDFQN-IVPDFLVGKYDAVVFISIKYHKLHNQYLR 79
Query: 126 DRIKALGKLYKLQV--------DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIET 177
RI++L K YK+++ S A+ +T +C ++TL LAWSP+EAG ++ET
Sbjct: 80 KRIESLQKNYKVRILLCLVDIPPSGAIDAAILEVTDICFDLNMTLFLAWSPKEAGHILET 139
Query: 178 YKVFENKPPDLIMEKQDVDPHSK 200
K EN ++I +D S+
Sbjct: 140 LKSHENSSSEIIRGGLSLDLFSR 162
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS 60
LAWSP+EAG ++ET K EN ++I +D S+ + N SE++
Sbjct: 125 FLAWSPKEAGHILETLKSHENSSSEIIRGGLSLDLFSRIRDALSSLPRINKTDSENLLKH 184
Query: 61 RAGASKSSNA 70
SK NA
Sbjct: 185 FGSISKVVNA 194
>gi|219120827|ref|XP_002185645.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582494|gb|ACI65115.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 208
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
+ + V+ +Q+GN +L I VP + +IPDYVM T CALFLS KYH+L P+YI RI
Sbjct: 13 HVLYVSTKQRGNGVLSFIRNVPQAFS-RMIPDYVMSATRCALFLSCKYHSLYPNYIHRRI 71
Query: 129 KALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
L + L+ VD +D + L L ++ + +LTL+LAW+ EEA +ETYK F+
Sbjct: 72 AELKTDFTLRILLVLVDVEDNANVLLILNKLAVQNNLTLILAWTEEEAARYLETYKAFDG 131
Query: 184 KPPDLIMEKQ 193
K +I +K+
Sbjct: 132 KDASIIQKKE 141
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQ 31
+LAW+ EEA +ETYK F+ K +I +K+
Sbjct: 111 ILAWTEEEAARYLETYKAFDGKDASIIQKKE 141
>gi|209878282|ref|XP_002140582.1| DNA repair protein rad10 [Cryptosporidium muris RN66]
gi|209556188|gb|EEA06233.1| DNA repair protein rad10, putative [Cryptosporidium muris RN66]
Length = 241
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 81/133 (60%), Gaps = 9/133 (6%)
Query: 65 SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYI 124
S++ + I+ + RQKGNPL+++I +E+ S++PD+++G+ +F+SIKYH L Y+
Sbjct: 37 SRACDIIVASNRQKGNPLIQYIKNTIYEFS-SLVPDFLVGKYDAVIFISIKYHKLHNTYL 95
Query: 125 ADRIKALGKLYKLQV--------DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
RI +L K YK++V S + +T +C ++TL+L W+P+EA ++E
Sbjct: 96 KRRIMSLEKNYKVRVVLCMVDVSSSAGLDTTILDITNICFNTNMTLLLVWTPQEAAAVLE 155
Query: 177 TYKVFENKPPDLI 189
K FEN PPD I
Sbjct: 156 AMKSFENTPPDSI 168
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLI 27
+L W+P+EA ++E K FEN PPD I
Sbjct: 142 LLVWTPQEAAAVLEAMKSFENTPPDSI 168
>gi|323450559|gb|EGB06440.1| hypothetical protein AURANDRAFT_29330 [Aureococcus anophagefferens]
Length = 245
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADR 127
++ +LV+ RQ+GNPLLKH+ V W ++ ++PDYV+G CA+F+SI+YH LKP Y++ R
Sbjct: 2 ADRLLVSERQRGNPLLKHLRNVAWRFEKKLVPDYVVGEKHCAVFISIRYHLLKPSYLSRR 61
Query: 128 IKALG------KLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
+ L ++ VD D AL L + + + TL+L S E +E +K +
Sbjct: 62 LAELKAETWRLRVLLCHVDLDDAAKALHELNVLAVKAECTLILGHSDRECARYLECFKAY 121
Query: 182 ENKPPDLIMEKQDVDPHSK 200
E I +K D H++
Sbjct: 122 ERNSAACIKDKVDGTHHAQ 140
>gi|58268204|ref|XP_571258.1| mating-type switching protein swi10 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227493|gb|AAW43951.1| mating-type switching protein swi10, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 390
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 12/165 (7%)
Query: 33 VDPHSKTWNFDPVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWE 92
V S T P+ +S TS + +R ASK N+I+ N R+ NP+L I V E
Sbjct: 71 VGSSSNTAAGTGGPSTNSSQTSRPI--NRPAASK--NSIIYNARR--NPVLSAIRNVGIE 124
Query: 93 YDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQV-----DSKDPHHA 147
D I+ DY +G LFLS+KYH L P+YI RI+ + +Y +V D + H +
Sbjct: 125 VGD-IVADYQVGAHNGVLFLSLKYHRLHPEYIHQRIEKMKNMYNFRVILVLCDVNEHHQS 183
Query: 148 LKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEK 192
L+ LT++ ++ + T+ +AWS EE + + T+K FE+K D + E+
Sbjct: 184 LRELTKIAIINEFTVFVAWSNEEVAQYLVTFKQFEHKSADTLKER 228
>gi|134113312|ref|XP_774681.1| hypothetical protein CNBF3600 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257325|gb|EAL20034.1| hypothetical protein CNBF3600 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 390
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 46 PAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGR 105
P+ +S TS + +R ASK N+I+ N R+ NP+L I V E D I+ DY +G
Sbjct: 84 PSTNSSQTSRPI--NRPAASK--NSIIYNARR--NPVLSAIRNVGIEVGD-IVADYQVGA 136
Query: 106 TTCALFLSIKYHALKPDYIADRIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDL 160
LFLS+KYH L P+YI RI+ + +Y +V D + H +L+ LT++ ++ +
Sbjct: 137 HNGVLFLSLKYHRLHPEYIHQRIEKMKNMYNFRVILVLCDVNEHHQSLRELTKIAIINEF 196
Query: 161 TLMLAWSPEEAGEMIETYKVFENKPPDLIMEK 192
T+ +AWS EE + + T+K FE+K D + E+
Sbjct: 197 TVFVAWSNEEVAQYLVTFKQFEHKSADTLKER 228
>gi|321260416|ref|XP_003194928.1| mating-type switching protein swi10 [Cryptococcus gattii WM276]
gi|317461400|gb|ADV23141.1| mating-type switching protein swi10, putative [Cryptococcus gattii
WM276]
Length = 387
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 8/131 (6%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S N+I+ N R+ NP+L I V E D I+ DY +G LFLS+KYH L P+YI
Sbjct: 101 SKNSIIYNARR--NPVLSAIRNVGIEVGD-IVADYQVGAHNGVLFLSLKYHRLHPEYIHQ 157
Query: 127 RIKALGKLYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RI+ + +Y +V D + H +L+ LT++ ++ + T+ +AWS EE + + T+K F
Sbjct: 158 RIEKMKNMYNFRVILVLCDVNEHHQSLRELTKIAIINEFTVFVAWSNEEVAQYLVTFKQF 217
Query: 182 ENKPPDLIMEK 192
E+K D + E+
Sbjct: 218 EHKSADTLKER 228
>gi|254567946|ref|XP_002491083.1| Single-stranded DNA endonuclease (with Rad1p), cleaves
single-stranded DNA during nucleotide excisio
[Komagataella pastoris GS115]
gi|238030880|emb|CAY68803.1| Single-stranded DNA endonuclease (with Rad1p), cleaves
single-stranded DNA during nucleotide excisio
[Komagataella pastoris GS115]
gi|328352390|emb|CCA38789.1| DNA ligase [Komagataella pastoris CBS 7435]
Length = 324
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 12/145 (8%)
Query: 50 NSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIP-DYVMGRTTC 108
N+ ++ +++ + + N+I VN Q GNPLLKH+ V WE+ +I DY++ T
Sbjct: 92 NTPSNLAIRHQKKTGKTTFNSIQVNKSQTGNPLLKHLKTVSWEFSSNIKQVDYLVNSQTF 151
Query: 109 ALFLSIKYHALKPDYIADRIKALG-----------KLYKLQVDSKDPHHALKYLTRVCLL 157
LFLS+KYH L P+YI ++IK++ KL + VD L+ LT+ C+
Sbjct: 152 VLFLSLKYHKLHPEYIMNKIKSMNGNDTSFTNNNLKLLLVVVDIDSHEDILRELTKTCVN 211
Query: 158 CDLTLMLAWSPEEAGEMIETYKVFE 182
DL+L+L+WS EEA I K +E
Sbjct: 212 NDLSLVLSWSFEEAANYIVYLKQYE 236
>gi|328865770|gb|EGG14156.1| DNA excision repair protein 1 [Dictyostelium fasciculatum]
Length = 413
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 88/143 (61%), Gaps = 8/143 (5%)
Query: 62 AGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKP 121
S S ++++V+ R +GN +++ + V WEY+ +I PD++M +C LFLS+K H L+P
Sbjct: 178 VSQSFSFSSLIVSERLRGNGIIQFLNLVKWEYNSNIKPDFLMAHDSCGLFLSLKNHRLQP 237
Query: 122 DYIADRIKALGKLYKLQ-----VDSKDPHHA--LKYLTRVCLLCDLTLMLAWSPEEAGEM 174
+ +R KA+ +++L+ VD ++ L+ L+ C++ +LTL++ WS E
Sbjct: 238 AQLGERNKAISSVHELRVLFVLVDVEEASAVPLLEELSHWCIVYNLTLVVGWSLIEVARY 297
Query: 175 IETYKVFENKPPDLIMEKQ-DVD 196
I+T+K+F+ K PD+I K D+D
Sbjct: 298 IQTFKLFDQKSPDIIKTKHSDLD 320
>gi|221053253|ref|XP_002258001.1| nucleotide excision repair protein [Plasmodium knowlesi strain H]
gi|193807833|emb|CAQ38538.1| nucleotide excision repair protein, putative [Plasmodium knowlesi
strain H]
Length = 230
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 78/121 (64%), Gaps = 6/121 (4%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
++++PRQK NP+LK I +V +++ + IIPD+++G+ LF+S+KYH L+ +Y+ RI+
Sbjct: 37 LVISPRQKLNPILKKINRVRYKFSN-IIPDFLIGKNNACLFISMKYHRLRSNYLKARIET 95
Query: 131 LGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKP 185
L Y + VD ++ ++L + ++ ++TL+L WS EE +IE +K++E K
Sbjct: 96 LSNKYNNRILLCLVDIENIENSLGEINQLAFCFNMTLILCWSIEECARVIEDFKIYEKKI 155
Query: 186 P 186
P
Sbjct: 156 P 156
>gi|390371183|dbj|GAB65064.1| ERCC1 nucleotide excision repair protein, partial [Plasmodium
cynomolgi strain B]
Length = 210
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 77/119 (64%), Gaps = 6/119 (5%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
++++PRQK NP+LK I +V +++ + IIPD+++G+ LF+S+KYH L+ +Y+ RI+
Sbjct: 36 LVISPRQKLNPILKKINRVRYKFSN-IIPDFLIGKNNACLFISMKYHRLRSNYLKARIET 94
Query: 131 LGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
L Y + VD ++ ++L + ++ ++TL+L WS EE +IE +K++E K
Sbjct: 95 LSNKYNNRILLCLVDIENIENSLGEINQLAFCFNMTLILCWSTEECARVIEDFKIYEKK 153
>gi|255731205|ref|XP_002550527.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132484|gb|EER32042.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 336
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 24/160 (15%)
Query: 50 NSATSESVQP---SRAGASKSS----NAILVNPRQKGNPLL--KHIGKVPWEYDDSIIPD 100
N AT++ V P R+ +S + IL+NP QK NP+L + KVPW YD +++ D
Sbjct: 85 NKATAKPVTPLESQRSSTPRSKTHGPSQILINPHQKNNPILTKSRLSKVPWRYDSNVLSD 144
Query: 101 YVMGRTTCALFLSIKYHALKPDYIADRIKALGK---------------LYKLQVDSKDPH 145
Y + T LFLS+KYH L P+Y+ + + K + + VD +P
Sbjct: 145 YYISPTFQILFLSLKYHNLHPEYLEHKWRKFNKGSIINDTNSNDKALRVLLVHVDITNPQ 204
Query: 146 HALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKP 185
L+ ++ C LTL+LAWS EEAG I T K ++ P
Sbjct: 205 DTLRRISSFCNKVRLTLVLAWSQEEAGNYIATAKSIDDAP 244
>gi|156093842|ref|XP_001612959.1| ERCC1 nucleotide excision repair protein [Plasmodium vivax Sal-1]
gi|148801833|gb|EDL43232.1| ERCC1 nucleotide excision repair protein, putative [Plasmodium
vivax]
Length = 229
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 77/119 (64%), Gaps = 6/119 (5%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
++++PRQK NP+LK I +V +++ + IIPD+++G+ LF+S+KYH L+ +Y+ RI+
Sbjct: 36 LVISPRQKLNPVLKKINRVRYKFSN-IIPDFLIGKNNACLFISMKYHRLRSNYLKARIET 94
Query: 131 LGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
L Y + VD ++ ++L + ++ ++TL+L WS EE +IE +K++E K
Sbjct: 95 LSNKYSNRILLCLVDIENIENSLGEINQLAFCFNMTLILCWSTEECARVIEDFKIYEKK 153
>gi|82753394|ref|XP_727660.1| DNA repair protein Rad10 [Plasmodium yoelii yoelii 17XNL]
gi|23483611|gb|EAA19225.1| DNA repair protein rad10, putative [Plasmodium yoelii yoelii]
Length = 215
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S ++++PRQK NP+LK I +V +++++ I+PD+++G+ LF+S+KYH LKP+Y+
Sbjct: 18 SDKYLIISPRQKLNPVLKKINRVQYKFNE-IVPDFLIGKNNACLFISMKYHRLKPNYLKA 76
Query: 127 RIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RI+ L Y + VD + + L + ++ ++TL+L W E +IE YK+F
Sbjct: 77 RIETLTNKYNNRILLCLVDIDNIENPLGEINQLAFCYNMTLILCWDNNECARIIEDYKIF 136
Query: 182 E 182
E
Sbjct: 137 E 137
>gi|70952535|ref|XP_745429.1| ERCC1 nucleotide excision repair protein [Plasmodium chabaudi
chabaudi]
gi|56525749|emb|CAH76930.1| ERCC1 nucleotide excision repair protein, putative [Plasmodium
chabaudi chabaudi]
Length = 214
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 77/121 (63%), Gaps = 6/121 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S ++++PRQK NP+LK I +V +++++ I+PD+++G+ LF+S+KYH L+P+Y+
Sbjct: 17 SDQYLIISPRQKLNPVLKKINRVQYKFNE-IVPDFLIGKNNACLFISMKYHRLRPNYLKA 75
Query: 127 RIKAL-----GKLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
RI+ L +L VD + + L + ++ ++TL+L W+ +E +IE +K+F
Sbjct: 76 RIETLTNKYNNRLLLCLVDIDNIENPLGEINQLAFCNNMTLILCWTNDECARVIEDFKIF 135
Query: 182 E 182
E
Sbjct: 136 E 136
>gi|260950013|ref|XP_002619303.1| hypothetical protein CLUG_00462 [Clavispora lusitaniae ATCC 42720]
gi|238846875|gb|EEQ36339.1| hypothetical protein CLUG_00462 [Clavispora lusitaniae ATCC 42720]
Length = 364
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 71/130 (54%), Gaps = 13/130 (10%)
Query: 67 SSNAILVNPRQKGNPLL--KHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYI 124
S+ AI V P QKGNPLL + PW Y I+ DY + T LFLS+KYH L+P+Y+
Sbjct: 151 SAAAIQVAPSQKGNPLLDSSQMKLTPWAYSSDILSDYYISATVQVLFLSLKYHRLRPEYV 210
Query: 125 ADRIKALG-----------KLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
RI+ L ++ + VD P +L++L+ +C+ DL L++AWS EEAG
Sbjct: 211 WRRIEKLKGSLVGQKDDTLRVLLVVVDIDAPQESLRHLSGICVKHDLALVVAWSFEEAGT 270
Query: 174 MIETYKVFEN 183
+ K E
Sbjct: 271 YVACLKQHEQ 280
>gi|307207093|gb|EFN84902.1| DNA excision repair protein ERCC-1 [Harpegnathos saltator]
Length = 193
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 50/63 (79%)
Query: 138 QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDP 197
QVD DPHH LK+LTR+ +L D+T+MLAW+ E+AG++IETYK +E KPPD IME+ D P
Sbjct: 67 QVDIADPHHVLKHLTRISILADMTIMLAWNAEDAGKIIETYKRYEVKPPDDIMERSDSAP 126
Query: 198 HSK 200
H K
Sbjct: 127 HQK 129
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
MLAW+ E+AG++IETYK +E KPPD IME+ D PH K
Sbjct: 92 MLAWNAEDAGKIIETYKRYEVKPPDDIMERSDSAPHQK 129
>gi|124800729|ref|XP_001349545.1| ERCC1 nucleotide excision repair protein, putative [Plasmodium
falciparum 3D7]
gi|3845112|gb|AAC71822.1| ERCC1 nucleotide excision repair protein, putative [Plasmodium
falciparum 3D7]
Length = 242
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 90/158 (56%), Gaps = 10/158 (6%)
Query: 34 DPHSKTWNFDPVPAAQNSATSESVQPSRAGASKSSNA----ILVNPRQKGNPLLKHIGKV 89
D +K N D V + ++ + + G S N ++++ RQK NP++K I +V
Sbjct: 7 DQCNKINNNDNVTSLESINEEKKNNTNEGGESFFDNNAEQYLIISLRQKLNPVIKKIKRV 66
Query: 90 PWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDP 144
+++++ IIPD+++G+ LF+S+KYH L+ +Y+ RI+ L Y + VD ++
Sbjct: 67 RYKFNN-IIPDFLVGKNNACLFISMKYHRLRSNYLKARIETLSNKYNNRILLCLVDMENI 125
Query: 145 HHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
++L + ++ ++TL+L WS EE +IE ++++E
Sbjct: 126 ENSLGEINQLSFSFNMTLILCWSNEECARVIEDFRIYE 163
>gi|354543999|emb|CCE40721.1| hypothetical protein CPAR2_107560 [Candida parapsilosis]
Length = 366
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 75/144 (52%), Gaps = 20/144 (13%)
Query: 58 QPSRAGASKSSNAILVNPRQKGNPLLKH--IGKVPWEYDDSIIPDYVMGRTTCALFLSIK 115
QP G S ILV+ Q+ NPLL + PW +D SI+ DY + T LFLS+K
Sbjct: 138 QPRSGGLSD----ILVHKSQEKNPLLSESMMKTTPWVFDGSILSDYYISPTFQILFLSLK 193
Query: 116 YHALKPDYIADRIKALGKLYKLQVDSKDPH--------------HALKYLTRVCLLCDLT 161
YH L+P+YI R+K L K + + KD + L+ L+ C+ DL+
Sbjct: 194 YHKLRPEYIWTRLKRLNKGSSIVENRKDNNLRVLLVVVDIDSHQEVLRKLSDFCIKHDLS 253
Query: 162 LMLAWSPEEAGEMIETYKVFENKP 185
L+LAWS EEAG I K F+N P
Sbjct: 254 LVLAWSFEEAGNYIALGKHFDNAP 277
>gi|294656298|ref|XP_458560.2| DEHA2D02134p [Debaryomyces hansenii CBS767]
gi|199431361|emb|CAG86692.2| DEHA2D02134p [Debaryomyces hansenii CBS767]
Length = 340
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 18/150 (12%)
Query: 50 NSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKH--IGKVPWEYDDSIIPDYVMGRTT 107
N+ S + +R ++ +++ V+ QKGNPLL + + +PW Y+ SI+ DY + T
Sbjct: 100 NTTRSNTKINARGSNVQTYSSVQVSQSQKGNPLLTNSLMKSIPWSYNGSILSDYYINPTL 159
Query: 108 CALFLSIKYHALKPDYIADRIKALGKLYKLQVDSK--------------DPHHA-LKYLT 152
LFLS+KYH L P+YI R+K L K + VD+ D H L+ L+
Sbjct: 160 QILFLSLKYHKLHPEYIWQRLKKLNKGSTI-VDTSNDRVLRLLLVVVDIDAHQEILRKLS 218
Query: 153 RVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
C+ DL+L+LAWS EEAG I K +E
Sbjct: 219 NFCIKQDLSLVLAWSFEEAGNYIGFCKQYE 248
>gi|68073927|ref|XP_678878.1| ERCC1 nucleotide excision repair protein [Plasmodium berghei strain
ANKA]
gi|56499483|emb|CAH94981.1| ERCC1 nucleotide excision repair protein, putative [Plasmodium
berghei]
Length = 214
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Query: 65 SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYI 124
+ S ++++PRQK NP+LK I + +++++ I+PD+++G+ LF+S+ YH LKP+Y+
Sbjct: 15 TNSDQYLIISPRQKLNPVLKKINRAQYKFNE-IVPDFLIGKNNACLFISMTYHRLKPNYL 73
Query: 125 ADRIKAL-----GKLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
RI+ L +L +D + + L + ++ ++TL+L W+ +E +IE +K
Sbjct: 74 KARIETLTNKYNNRLLLCLIDIDNIENPLGEINQLAFCYNMTLILCWTNDECARIIEDFK 133
Query: 180 VFE 182
+FE
Sbjct: 134 IFE 136
>gi|344305084|gb|EGW35316.1| hypothetical protein SPAPADRAFT_58541 [Spathaspora passalidarum
NRRL Y-27907]
Length = 342
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 80/164 (48%), Gaps = 23/164 (14%)
Query: 44 PVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKH--IGKVPWEYDDSIIPDY 101
P P S + S S + A ILV+ Q GNPLLK + PW++D +I+ DY
Sbjct: 97 PAPVNSTSTSKHSTHRSASIAE-----ILVSKSQTGNPLLKESMMKLTPWKFDSTILSDY 151
Query: 102 VMGRTTCALFLSIKYHALKPDYIADRIKALGK----------------LYKLQVDSKDPH 145
+ T LFLS+KY+ +KP+YI R+K K + + VD
Sbjct: 152 YISPTFQILFLSLKYYKIKPEYIWTRLKKWNKGTSVVASQRINDRALRILLVVVDIDGHQ 211
Query: 146 HALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLI 189
L+ L+ +C+ DLT++LAWS EEAG I K +N P I
Sbjct: 212 EVLRKLSDICIKNDLTMVLAWSFEEAGNYIAMAKQLDNAPSKTI 255
>gi|221484889|gb|EEE23179.1| DNA repair protein Rad10 domain-containing protein, putative
[Toxoplasma gondii GT1]
Length = 424
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 7/136 (5%)
Query: 66 KSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIA 125
++ + ++++ RQKGNPLLK I VP + I PD+++G + C LFLS++YH L P Y++
Sbjct: 176 RAGSLLVISLRQKGNPLLKFITAVPHTFA-YIAPDFLVGPSACVLFLSLRYHQLFPSYLS 234
Query: 126 DRIKALG------KLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
RI+ L K L VD + P AL +T + +L+L +E +++ K
Sbjct: 235 KRIEDLADGRYTHKFLLLHVDLEVPDAALAQVTLLAFHHCFSLLLGTCLQECAGVLQLLK 294
Query: 180 VFENKPPDLIMEKQDV 195
+E KP D ++ K D
Sbjct: 295 AYEKKPADTLLAKLDA 310
>gi|237835939|ref|XP_002367267.1| DNA repair protein rad10 domain-containing protein [Toxoplasma
gondii ME49]
gi|211964931|gb|EEB00127.1| DNA repair protein rad10 domain-containing protein [Toxoplasma
gondii ME49]
gi|221506056|gb|EEE31691.1| DNA repair protein Rad10 domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 409
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 7/136 (5%)
Query: 66 KSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIA 125
++ + ++++ RQKGNPLLK I VP + I PD+++G + C LFLS++YH L P Y++
Sbjct: 161 RAGSLLVISLRQKGNPLLKFITAVPHTFA-YIAPDFLVGPSACVLFLSLRYHQLFPSYLS 219
Query: 126 DRIKALG------KLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
RI+ L K L VD + P AL +T + +L+L +E +++ K
Sbjct: 220 KRIEDLADGRYTHKFLLLHVDLEVPDAALAQVTLLAFHHCFSLLLGTCLQECAGVLQLLK 279
Query: 180 VFENKPPDLIMEKQDV 195
+E KP D ++ K D
Sbjct: 280 AYEKKPADTLLAKLDA 295
>gi|392573917|gb|EIW67055.1| hypothetical protein TREMEDRAFT_23521, partial [Tremella
mesenterica DSM 1558]
Length = 187
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 71/121 (58%), Gaps = 6/121 (4%)
Query: 77 QKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGKLYK 136
++ NP+L+ I V E D ++ DY +G LFLS+KYH L P+YI RI+ + Y
Sbjct: 1 KRRNPVLQAIKNVGIEIGD-VVADYQVGTHNGVLFLSLKYHRLHPEYIHQRIEKMRNKYS 59
Query: 137 LQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIME 191
L++ D + +L+ ++++ ++ D T+ +AWS EE + + T+K FE+K D + E
Sbjct: 60 LRIMLILCDVNEHQQSLREISKIAIVNDFTVFVAWSNEEVAQYLTTFKAFEHKSADTLKE 119
Query: 192 K 192
+
Sbjct: 120 R 120
>gi|448518971|ref|XP_003868015.1| Rad10 protein [Candida orthopsilosis Co 90-125]
gi|380352354|emb|CCG22580.1| Rad10 protein [Candida orthopsilosis]
Length = 354
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 20/144 (13%)
Query: 58 QPSRAGASKSSNAILVNPRQKGNPLLKH--IGKVPWEYDDSIIPDYVMGRTTCALFLSIK 115
QP +G S ILV+ Q+ NPLL + PW +D SI+ DY + T LFLS+K
Sbjct: 126 QPRSSGLSD----ILVHKSQEKNPLLSESMMKTTPWVFDGSILSDYYISPTFQILFLSLK 181
Query: 116 YHALKPDYIADRIKALGKLYKLQVDSKDPH--------------HALKYLTRVCLLCDLT 161
YH L+P+YI R+K L K + + KD + L+ L+ C+ DL+
Sbjct: 182 YHKLRPEYIWTRLKRLNKGSTIIENRKDNNLRVLLVVVDIDSHQEVLRKLSDFCIKHDLS 241
Query: 162 LMLAWSPEEAGEMIETYKVFENKP 185
L+LAWS EEAG I K +N P
Sbjct: 242 LVLAWSFEEAGNYIALGKHLDNAP 265
>gi|190348582|gb|EDK41056.2| hypothetical protein PGUG_05154 [Meyerozyma guilliermondii ATCC
6260]
Length = 319
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 16/151 (10%)
Query: 53 TSESVQPSRAG-ASKSSNAILVNPRQKGNPLLKH--IGKVPWEYDDSIIPDYVMGRTTCA 109
+ + +QP R A +S +A+ V+ QKGNPLL + + PW ++ SI+ DY + +
Sbjct: 80 SRDRIQPHRRRPAPQSYSAVQVSNSQKGNPLLNNSLMKTTPWSFNGSILSDYYINASVQI 139
Query: 110 LFLSIKYHALKPDYIADRIKALG-------------KLYKLQVDSKDPHHALKYLTRVCL 156
LFLS+KYH + P+YI R+K L ++ + VD + L+ L +C+
Sbjct: 140 LFLSLKYHKVHPEYIWQRLKKLHRGSSVSSRSDNSLRVLLVVVDIDAYNEVLRKLADLCI 199
Query: 157 LCDLTLMLAWSPEEAGEMIETYKVFENKPPD 187
DL+L+LAWS EEAG I K +E +
Sbjct: 200 KQDLSLVLAWSFEEAGNYIAYAKQYETSASN 230
>gi|146414457|ref|XP_001483199.1| hypothetical protein PGUG_05154 [Meyerozyma guilliermondii ATCC
6260]
Length = 319
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 16/151 (10%)
Query: 53 TSESVQPSRAG-ASKSSNAILVNPRQKGNPLLKH--IGKVPWEYDDSIIPDYVMGRTTCA 109
+ + +QP R A +S +A+ V+ QKGNPLL + + PW ++ SI+ DY + +
Sbjct: 80 SRDRIQPHRRRPAPQSYSAVQVSNSQKGNPLLNNSLMKTTPWSFNGSILSDYYINASVQI 139
Query: 110 LFLSIKYHALKPDYIADRIKALG-------------KLYKLQVDSKDPHHALKYLTRVCL 156
LFLS+KYH + P+YI R+K L ++ + VD + L+ L +C+
Sbjct: 140 LFLSLKYHKVHPEYIWQRLKKLHRGSSVSSRSDNSLRVLLVVVDIDAYNEVLRKLADLCI 199
Query: 157 LCDLTLMLAWSPEEAGEMIETYKVFENKPPD 187
DL+L+LAWS EEAG I K +E +
Sbjct: 200 KQDLSLVLAWSFEEAGNYIAYAKQYETSASN 230
>gi|430811830|emb|CCJ30686.1| unnamed protein product [Pneumocystis jirovecii]
Length = 235
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 79/141 (56%), Gaps = 20/141 (14%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFL---SIKY-----HALK 120
+AILVNPRQK NP+L EY DS DYV+G TCALFL +I + H
Sbjct: 39 HAILVNPRQKKNPVL--------EYGDSP-ADYVLGAGTCALFLRQPTIPFIIPGIHLPS 89
Query: 121 PDYIADRIKALGKLYKLQVDSKDPHH-ALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
P + + + KL V+++D H AL+ LT+ C++ D TL+L+WS EAG +ETYK
Sbjct: 90 PTELGEGVSTAS--IKLIVNNQDCHETALRELTKTCIINDATLILSWSFAEAGRYLETYK 147
Query: 180 VFENKPPDLIMEKQDVDPHSK 200
E+ +I K D +SK
Sbjct: 148 SLEHASFSIIQGKSHEDYYSK 168
>gi|149244684|ref|XP_001526885.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449279|gb|EDK43535.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 399
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 88/197 (44%), Gaps = 28/197 (14%)
Query: 5 SPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPSRAGA 64
+P G+ + + P L K D P + + P Q +S + P+
Sbjct: 107 TPSSHGQQRQISNRTSSHEPPLTQNKSDASPIN---DVAPRSVRQRQQSSRPIGPAE--- 160
Query: 65 SKSSNAILVNPRQKGNPLLKH--IGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPD 122
ILV+ Q+ NPLL + PW +D I+ DY + T LFLS+KYH L+P+
Sbjct: 161 ------ILVHKSQEKNPLLSDSMMKTTPWVFDSLILSDYYINPTFQILFLSLKYHKLRPE 214
Query: 123 YIADRIKALGKLYKLQVDSKDP--------------HHALKYLTRVCLLCDLTLMLAWSP 168
YI R+K L K + + D L+ L+ C+ DL+LMLAWS
Sbjct: 215 YIWTRLKKLHKGSSVIENRNDKVLRVLLVVVDIDSHQEPLRKLSDFCIKHDLSLMLAWSF 274
Query: 169 EEAGEMIETYKVFENKP 185
EEAG I K F+N P
Sbjct: 275 EEAGNYIALGKHFDNAP 291
>gi|344229923|gb|EGV61808.1| DNA repair protein rad10 [Candida tenuis ATCC 10573]
Length = 325
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 77/152 (50%), Gaps = 20/152 (13%)
Query: 44 PVPAAQNSA-TSESVQPSRAGASKSSNAILVNPRQKGNPLLKH--IGKVPWEYDDSIIPD 100
PV Q+S S +QP A + + I V P QKGNP+ + + + P Y+ I+ D
Sbjct: 82 PVGVGQSSRPVSRRIQP----AVQMYSQIQVAPSQKGNPVFQSSLLKQKPIAYNKEILSD 137
Query: 101 YVMGRTTCALFLSIKYHALKPDYIADRIKALG-------------KLYKLQVDSKDPHHA 147
Y + T LFLS+KYH L P+YI R K L K+ +D + P A
Sbjct: 138 YYINPTLQVLFLSMKYHQLHPEYIWRRCKKLNQGSTVSTIKDNACKILLAVIDIESPQEA 197
Query: 148 LKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
L+ L +C+ DLTL++AWS E+AG I K
Sbjct: 198 LRKLNNICIKQDLTLLIAWSFEQAGNYIAMLK 229
>gi|448097500|ref|XP_004198689.1| Piso0_002075 [Millerozyma farinosa CBS 7064]
gi|359380111|emb|CCE82352.1| Piso0_002075 [Millerozyma farinosa CBS 7064]
Length = 330
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 84/185 (45%), Gaps = 43/185 (23%)
Query: 30 KQDVDPHSKTWNFDPVPAAQNSATSESVQPSRAGASKSS----------------NAILV 73
KQ+ D H DP+ QN +TS S+ G K S + ILV
Sbjct: 63 KQNSDAH------DPMKTEQNKSTS-----SKEGIRKESKPKGTLRHQVTSVQTFSNILV 111
Query: 74 NPRQKGNPLLKH--IGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKAL 131
+ QKGNPLL + + W YD SI+ DY + T LFLS+KYH L P+Y+ R+K +
Sbjct: 112 SKTQKGNPLLTNSLMKSTSWSYDGSILSDYYINPTLQILFLSLKYHKLHPEYVWQRLKKI 171
Query: 132 GKLYKLQVDSKDP--------------HHALKYLTRVCLLCDLTLMLAWSPEEAGEMIET 177
K D L+ L+ C+ DL+L+L+WS EEAG I
Sbjct: 172 NKGAANSSSRNDRALRLLLVVVDVEAHQELLRKLSGFCVKNDLSLVLSWSFEEAGNYIVF 231
Query: 178 YKVFE 182
K +E
Sbjct: 232 AKKYE 236
>gi|330806281|ref|XP_003291100.1| hypothetical protein DICPUDRAFT_20909 [Dictyostelium purpureum]
gi|325078735|gb|EGC32370.1| hypothetical protein DICPUDRAFT_20909 [Dictyostelium purpureum]
Length = 210
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 71 ILVNPRQKGNPLLKHI-GKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIK 129
I VN Q+GNPL+++ + EY + IPDYV+ +C FLS+K + LKP+Y+ DRIK
Sbjct: 8 IFVNEFQRGNPLIRNFSNNIVVEYQKNQIPDYVITSNSCVFFLSLKVYRLKPNYVEDRIK 67
Query: 130 ALGKLYKLQVDSKDPHHA-----LKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN- 183
+ ++L+V L+ L + +LTL++ WS EAG+ IE+YK F +
Sbjct: 68 GTPQSFELRVLLVLVDVDDCVALLEELNISAIKSNLTLIVCWSFLEAGKYIESYKSFSSS 127
Query: 184 -KPPDLIMEK-QDVDPHSKT 201
K D I + Q V+ KT
Sbjct: 128 AKSVDFIKTRPQPVELGGKT 147
>gi|402590541|gb|EJW84471.1| helix-hairpin-helix domain-containing protein family protein
[Wuchereria bancrofti]
Length = 163
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
+S I+ RQ+GNP+LK+I VP+E+ D I D+ G+ L+LS+K+H L P+YI
Sbjct: 15 NSRLIISRKRQEGNPVLKYIRNVPFEWAD-IKADFEAGKEMGILYLSLKWHKLHPNYIET 73
Query: 127 RIKALGKLYKLQV----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
RI G Y +++ + +P H L+ L C TLML +S EEA E +E +
Sbjct: 74 RINNDGAGYVIKILLVLVNVEPRHILRELNLFCYRTGWTLMLCYSAEEAAEYLENLHISR 133
Query: 183 NK 184
N+
Sbjct: 134 NR 135
>gi|448101345|ref|XP_004199538.1| Piso0_002075 [Millerozyma farinosa CBS 7064]
gi|359380960|emb|CCE81419.1| Piso0_002075 [Millerozyma farinosa CBS 7064]
Length = 330
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 14 ETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESVQPS---RAGASKSSNA 70
E + N D + D +KT PV A + + S +A + ++ +
Sbjct: 49 EETRASTNSGDDYKEQSSDAQDSTKTEQNKPVAAKEGIRKESKPKGSLRHQATSVQTFSN 108
Query: 71 ILVNPRQKGNPLLKH--IGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
ILV+ QKGNPLL + + W YD SI+ DY + T LFLS+KYH L P+Y+ R+
Sbjct: 109 ILVSKTQKGNPLLTNSLMKSTSWSYDGSILSDYYINPTLQILFLSLKYHKLHPEYVWQRL 168
Query: 129 KALGKLYKLQVDSKDP--------------HHALKYLTRVCLLCDLTLMLAWSPEEAGEM 174
K + K D L+ L+ C+ DL+L+L+WS EEAG
Sbjct: 169 KKINKGAASSSSRNDRSLRVLLVVVDVEAHQELLRKLSGFCVKNDLSLVLSWSFEEAGNY 228
Query: 175 IETYKVFE 182
I K +E
Sbjct: 229 IVFAKKYE 236
>gi|399217110|emb|CCF73797.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 75/124 (60%), Gaps = 6/124 (4%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI-- 128
++++ +QK NPL+ H+ VP+E+ + + D+ +G++ LF+S K+H L P+Y+ +RI
Sbjct: 5 LVISHKQKDNPLINHLRHVPYEFGE-VKADFCIGQSIGILFISQKFHRLSPNYLPNRICS 63
Query: 129 ---KALGKLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKP 185
K K QVD +DP L+ + + + +TL+L+WSP E+ ++IE +++ KP
Sbjct: 64 FKDKFSKKFIICQVDLQDPFPVLESIQLLAIKSHITLLLSWSPAESAKLIEICRIYVLKP 123
Query: 186 PDLI 189
I
Sbjct: 124 STYI 127
>gi|281202660|gb|EFA76862.1| DNA excision repair protein 1 [Polysphondylium pallidum PN500]
Length = 536
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 6/130 (4%)
Query: 70 AILVNPRQKGNPLLKH-IGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
++ N + KGNP+ + + +E+ I PD+VM T+C L+ ++K + LKP + DR
Sbjct: 263 TLVANEKLKGNPIFRFFLQSTTFEFQGGIKPDFVMSSTSCCLYTTLKDYRLKPTELIDRS 322
Query: 129 KALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
K L ++L+ V+ D L+ L+ VC +L L++AW+ EA IE +K+ +
Sbjct: 323 KQLPSRFELRVLVVVVNIDDCISLLEELSFVCTQINLVLIVAWNVPEAARYIEGFKILDT 382
Query: 184 KPPDLIMEKQ 193
PD+I KQ
Sbjct: 383 VSPDIIKTKQ 392
>gi|303274138|ref|XP_003056392.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462476|gb|EEH59768.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 223
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
+ +LV+ Q GNP+L++I V W + S++PD+ + ++C +FLS ++H L P+Y+ RI
Sbjct: 23 DVLLVSSTQSGNPVLRNIYNVRWSFS-SVVPDFSLSASSCVIFLSARFHVLHPEYLHSRI 81
Query: 129 KALGK-----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFEN 183
+ + VD +D + L + + + D TL+ +WS EE+ +ET K +E+
Sbjct: 82 QQMRNNLNFCFVLCIVDMEDSVNVLCDINKTSTVQDCTLVCSWSLEESARYLETLKEYES 141
Query: 184 KPPDLIMEKQDVDPHSK 200
+ I + +D S+
Sbjct: 142 YSTNDIEGTEKIDFVSR 158
>gi|312077422|ref|XP_003141297.1| helix-hairpin-helix domain-containing protein family protein [Loa
loa]
gi|307763540|gb|EFO22774.1| helix-hairpin-helix domain-containing protein family protein [Loa
loa]
Length = 253
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 6/142 (4%)
Query: 48 AQNSATSESVQPSRAGASKSSNAILVN-PRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRT 106
+ N E + S++G ++ +++N RQ+GNP+LK+I VP+E+ D I D+ G+
Sbjct: 23 SANVLEMEILSSSQSGTILPNSRLIINRKRQEGNPVLKYIRNVPFEWAD-IKADFEAGKE 81
Query: 107 TCALFLSIKYHALKPDYIADRIKALGKLYKLQV----DSKDPHHALKYLTRVCLLCDLTL 162
L+LS+K+H L P+YI RI G Y +++ + +P H L+ L C TL
Sbjct: 82 MGILYLSLKWHKLHPNYIETRINNDGTGYTIKILLVLVNVEPRHILRELNLFCYRTAWTL 141
Query: 163 MLAWSPEEAGEMIETYKVFENK 184
ML +S EEA E +E + ++
Sbjct: 142 MLCYSAEEAAEYLENLHISRSR 163
>gi|401413412|ref|XP_003886153.1| putative DNA repair protein rad10 domain-containing protein
[Neospora caninum Liverpool]
gi|325120573|emb|CBZ56127.1| putative DNA repair protein rad10 domain-containing protein
[Neospora caninum Liverpool]
Length = 446
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
+++ RQKGN LL+ I VP + I PD+++G + LF+S++YH L P Y+ R+++
Sbjct: 178 LIIALRQKGNALLRFITAVPHTFA-YIAPDFLVGPSAAVLFISLRYHQLFPSYLLKRMES 236
Query: 131 L------GKLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
L K L VD + P AL +T + +L+L S +E +++ KV+E K
Sbjct: 237 LVEGRYTHKFLLLHVDLEAPDAALAQVTLLAFHHCFSLLLGSSLQECAGILQLLKVYEKK 296
Query: 185 PPDLIMEKQD 194
P D ++ K D
Sbjct: 297 PADALLAKLD 306
>gi|324523831|gb|ADY48308.1| DNA excision repair protein ERCC-1 [Ascaris suum]
Length = 226
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 5/129 (3%)
Query: 60 SRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHAL 119
S A SS + RQ+GNP+LK+I VP+E+ D I D+ G+ L+LS+K+H L
Sbjct: 6 SGQAAPASSKLAINRRRQEGNPVLKYIRNVPFEWAD-IKADFEAGKEMGILYLSLKWHKL 64
Query: 120 KPDYIADRIKALGKLYKLQV----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMI 175
P YI R+ + G Y ++V + D L+ L C TL+L +SPEEA E +
Sbjct: 65 HPGYIETRMNSDGADYTIKVLLVLVNVDQRFMLRELNLFCYRTGWTLVLCYSPEEAAEYL 124
Query: 176 ETYKVFENK 184
E + + +NK
Sbjct: 125 ENFHMAKNK 133
>gi|402471057|gb|EJW04985.1| DNA repair protein rad10 [Edhazardia aedis USNM 41457]
Length = 193
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
I VN +Q+GN LL ++ K W Y+D+++ DY + TT LFLS ++H KP+YI R++
Sbjct: 2 IKVNNKQRGNNLLDYLTKSVWFYEDTLVTDYQINDTTSVLFLSCRFHIAKPEYIHKRMRK 61
Query: 131 LGKL-YKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
L + Y+L+ VD K+ L L + L + T++ +S EEA T++ +NK
Sbjct: 62 LRNIKYELKVILVLVDVKNYDSLLCELFNIANLNEHTVIFCYSNEEAARYFSTFESIKNK 121
Query: 185 PPD 187
+
Sbjct: 122 SAE 124
>gi|321459229|gb|EFX70285.1| hypothetical protein DAPPUDRAFT_61546 [Daphnia pulex]
Length = 146
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 5/76 (6%)
Query: 124 IADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETY 178
I DR+K LGK Y+L QVD KDP+ +K LT++CLL DLTL+L+W+ +EAG++IETY
Sbjct: 1 IHDRLKDLGKQYELRILLVQVDIKDPYTPIKELTKMCLLADLTLLLSWNAQEAGKIIETY 60
Query: 179 KVFENKPPDLIMEKQD 194
KVFE+KPPDLIM KQ+
Sbjct: 61 KVFEHKPPDLIMGKQE 76
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 3 AWSPEEAGEMIETYKVFENKPPDLIMEKQD 32
+W+ +EAG++IETYKVFE+KPPDLIM KQ+
Sbjct: 47 SWNAQEAGKIIETYKVFEHKPPDLIMGKQE 76
>gi|366991223|ref|XP_003675377.1| hypothetical protein NCAS_0C00180 [Naumovozyma castellii CBS 4309]
gi|342301242|emb|CCC69008.1| hypothetical protein NCAS_0C00180 [Naumovozyma castellii CBS 4309]
Length = 205
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 44 PVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS-----II 98
P+ N+ T ++ + +K +LVN QK NPLL H+ W Y S I
Sbjct: 61 PINTTSNTDTKDASRKRPFSGNKHGKTVLVNTTQKENPLLNHLKNTNWRYISSTGGNKIY 120
Query: 99 PDYVMGRTTCALFLSIKYHALKPDYIADRIKALGK----LYKLQVDSKDPHHALKYLTRV 154
DY + R LFL++ YH L DYI R+ L + + VD K+ L+ +T++
Sbjct: 121 YDYFI-RERAVLFLTLTYHKLYADYITRRMHPLSQNENNILIFVVDDKNSEDTLRDITKM 179
Query: 155 CLLCDLTLMLAWSPEEAGEMIE 176
C+ TL++A++ E+A I
Sbjct: 180 CMFNGFTLLVAFNFEQAANYIR 201
>gi|25144926|ref|NP_492652.2| Protein ERCC-1 [Caenorhabditis elegans]
gi|21615452|emb|CAB02283.2| Protein ERCC-1 [Caenorhabditis elegans]
Length = 262
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 79/137 (57%), Gaps = 10/137 (7%)
Query: 67 SSNAILVNPR-QKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIA 125
S A++VN R Q+GNP+LK++ V +E+ D I PD+ G T ++LS KYH P+Y+
Sbjct: 47 GSGALVVNRRRQEGNPVLKYVRNVRYEWGD-IGPDFECGPTFGVVYLSFKYHKQHPEYVY 105
Query: 126 DRIKALGK-LYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
RI + Y+ +V + ++P H L+ L +C T ++ ++ EEA E IE +K
Sbjct: 106 TRINGNAENRYRNKVLLGYCNMEEPRHVLRELNMICFREAWTFVVVYTVEEAAEYIELFK 165
Query: 180 VFENKPPDLIMEKQDVD 196
+ K ++ ++K+ +D
Sbjct: 166 TTQKK--EITIKKKAID 180
>gi|406603041|emb|CCH45376.1| DNA excision repair protein [Wickerhamomyces ciferrii]
Length = 220
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDSI-IPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
+I VN Q GNPLL++I V W Y +S I DY++ + +FLS+KYH L P+YI +++
Sbjct: 105 SISVNKSQTGNPLLQNITNVNWNYVESRNIYDYLI-KNRQIIFLSLKYHKLHPEYIQNKM 163
Query: 129 KALGK---LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMI 175
K L K + VD ++ LK L R+CL + TL+LA++ E+A + +
Sbjct: 164 KPLMKKDAILLTVVDIENSESILKELNRICLYNEFTLLLAFNFEQAAKYL 213
>gi|365991245|ref|XP_003672451.1| hypothetical protein NDAI_0K00190 [Naumovozyma dairenensis CBS 421]
gi|343771227|emb|CCD27208.1| hypothetical protein NDAI_0K00190 [Naumovozyma dairenensis CBS 421]
Length = 205
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 35 PHSKTWNFDPVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYD 94
P +N + + + T + R +SN++LVN QK NPLL H+ W Y
Sbjct: 52 PVVNAFNQQRIIPGEGTNTDKDFSRKRPFTGSNSNSVLVNTTQKENPLLNHLKNTNWRYI 111
Query: 95 DS-----IIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGK----LYKLQVDSKDPH 145
S I DY++ R+ LFL++ YH L DYIA R+ L K + VD +
Sbjct: 112 SSTGGNKIYYDYLV-RSRSILFLTLSYHRLYADYIARRMLPLSKNENNILIFVVDDINSE 170
Query: 146 HALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
LK LT++C+ TL++A++ E+A +
Sbjct: 171 DPLKDLTKLCMFNGFTLLVAFNFEQAANYLR 201
>gi|19074742|ref|NP_586248.1| ERCC1-LIKE DNA EXCISION REPAIR PROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|19069384|emb|CAD25852.1| ERCC1-LIKE DNA EXCISION REPAIR PROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|449329911|gb|AGE96179.1| ercc1-like DNA excision repair protein [Encephalitozoon cuniculi]
Length = 187
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
I V+P QKGN +L ++ W YD+SI PDY + + LFLS+++H+ KP+YI RI
Sbjct: 2 IKVSPLQKGNSVLGYLSNTSWHYDNSITPDYEINSSVALLFLSLRFHSCKPEYIHKRISK 61
Query: 131 LGKLYK---LQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPD 187
L K YK L V P+++ K + + LT++L +S EE I+ + + + D
Sbjct: 62 L-KPYKTRVLLVHVDIPNYS-KMIRELFETTSLTMVLGFSVEECSRYIQGFNIAGRRSID 119
Query: 188 LI 189
+I
Sbjct: 120 VI 121
>gi|241948983|ref|XP_002417214.1| DNA excision-repair protein, putative [Candida dubliniensis CD36]
gi|223640552|emb|CAX44806.1| DNA excision-repair protein, putative [Candida dubliniensis CD36]
Length = 331
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 17/150 (11%)
Query: 53 TSESVQPSRAGASKSS-NAILVNPRQKGNPLLK--HIGKVPWEYDDSIIPDYVMGRTTCA 109
++ SV+PS + + ILV P Q+ NPLL + W +D SI+ DY +
Sbjct: 90 SNNSVKPSTKRLQTTGPSDILVAPSQERNPLLSLSKMQVTSWSFDKSILSDYYINPKFQI 149
Query: 110 LFLSIKYHALKPDYIADRIKALG--------------KLYKLQVDSKDPHHALKYLTRVC 155
LFLS++YH L P+YI +R K L ++ + VD L+ L+ C
Sbjct: 150 LFLSLRYHKLHPEYIWNRWKKLNQGSSTVHTRGDDVLRVLLVFVDIDSHQELLRKLSDFC 209
Query: 156 LLCDLTLMLAWSPEEAGEMIETYKVFENKP 185
+ DL+L+LAWS EEAG I K +N P
Sbjct: 210 IKHDLSLVLAWSYEEAGNYIALCKQLDNAP 239
>gi|367009764|ref|XP_003679383.1| hypothetical protein TDEL_0B00430 [Torulaspora delbrueckii]
gi|359747041|emb|CCE90172.1| hypothetical protein TDEL_0B00430 [Torulaspora delbrueckii]
Length = 205
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 66 KSSNAILVNPRQKGNPLLKHIGKVPWEYDDS-----IIPDYVMGRTTCALFLSIKYHALK 120
K +LVN QK NPLL H+ + W Y S I DY++ R + LFL++ YH L
Sbjct: 83 KPGKTVLVNTTQKENPLLNHLKNINWRYISSSKGTKIYYDYLINRRSV-LFLTLTYHKLY 141
Query: 121 PDYIADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
DYI RI L K + VD + LK +T++C+ TL+LA++ E+A + IE
Sbjct: 142 ADYIGRRILPLQKNGDNILIFVVDDTNSEDILKDITKLCMFNGFTLLLAFNFEQAAKYIE 201
>gi|363756086|ref|XP_003648259.1| hypothetical protein Ecym_8154 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891459|gb|AET41442.1| Hypothetical protein Ecym_8154 [Eremothecium cymbalariae
DBVPG#7215]
Length = 199
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 16/125 (12%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEY-----DDSIIPDY-VMGRTTCALFLSIKYHALKPDY 123
ILV+ Q GNPLLK + W Y D I DY V GR +FLS+KYH L+P+Y
Sbjct: 81 TILVSTTQTGNPLLKLLVNTNWRYVKSSATDKIHYDYQVHGRN--VVFLSLKYHKLRPEY 138
Query: 124 IADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
I +++ GK + VD +D LK L ++ + TL+LA+S E+AG+ Y
Sbjct: 139 IGKKLQPFGKSQGNILLCVVDVEDSEDILKELNKMTMFSGFTLLLAFSFEQAGK----YL 194
Query: 180 VFENK 184
+F NK
Sbjct: 195 IFMNK 199
>gi|367004441|ref|XP_003686953.1| hypothetical protein TPHA_0I00120 [Tetrapisispora phaffii CBS 4417]
gi|357525256|emb|CCE64519.1| hypothetical protein TPHA_0I00120 [Tetrapisispora phaffii CBS 4417]
Length = 237
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 51 SATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS-----IIPDYVMGR 105
+ S+ + A S A+LVN QK NPLL H+ W Y S I DY++ R
Sbjct: 100 NGNKRSLNNTNLDARVISKAVLVNTTQKDNPLLNHLKNTNWRYTSSKGGQKIYYDYLV-R 158
Query: 106 TTCALFLSIKYHALKPDYIADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLT 161
LFL++ YH L DYI R+ L K + VD + L+ LT++C+ T
Sbjct: 159 QRPVLFLTLTYHKLYADYITRRMTPLSKNDNNILIFVVDDSNSEDTLRELTKLCMFNGFT 218
Query: 162 LMLAWSPEEAGEMIE 176
L++A+S E++ + I+
Sbjct: 219 LLVAFSFEQSAKYIQ 233
>gi|384493403|gb|EIE83894.1| hypothetical protein RO3G_08599 [Rhizopus delemar RA 99-880]
Length = 162
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
N ILV+P Q+ NP+LK I VP+E +SI DYV+G+TT ++LS++YH L P YI DR+
Sbjct: 87 NTILVSPNQQKNPVLKFIRNVPYEPSESIKVDYVVGQTTGVIYLSLRYHRLYPTYIYDRL 146
Query: 129 KALGKLYKLQVDSKDP 144
+ L + Q DS DP
Sbjct: 147 NNVKHLERDQSDS-DP 161
>gi|1763756|gb|AAB54060.1| excision repair enzyme ERCC-1 [Mesocricetus auratus]
Length = 127
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 42/55 (76%)
Query: 138 QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEK 192
QVD KDP ALK L ++C+L D TL+LAWS EEAG +ETYK +E KP DL+MEK
Sbjct: 1 QVDVKDPQKALKDLAKMCILADCTLVLAWSAEEAGRYLETYKAYEQKPADLLMEK 55
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESV 57
+LAWS EEAG +ETYK +E KP DL+MEK + + S+ + N S+++
Sbjct: 26 VLAWSAEEAGRYLETYKAYEQKPADLLMEKLEQNFLSRATECLTTVKSVNKTDSQTL 82
>gi|396082327|gb|AFN83937.1| Ercc1-like DNA excision repair protein [Encephalitozoon romaleae
SJ-2008]
Length = 187
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
I V+P QKGN +L ++ W YD+SI PDY + + LFLS+++H+ KP+YI RI
Sbjct: 2 IKVSPLQKGNSVLDYLSNATWHYDNSITPDYEVNGSVALLFLSLRFHSCKPEYIYKRINK 61
Query: 131 LG--KLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDL 188
L K+ L V P+++ K + + LT++L +S EE I+ + + D+
Sbjct: 62 LKPYKVRVLLVHVDVPNYS-KMIRELFRTVSLTMVLGFSVEECSRYIQGFDAAGRRSIDI 120
Query: 189 I 189
I
Sbjct: 121 I 121
>gi|303391166|ref|XP_003073813.1| Ercc1-like DNA excision repair protein [Encephalitozoon
intestinalis ATCC 50506]
gi|303302961|gb|ADM12453.1| Ercc1-like DNA excision repair protein [Encephalitozoon
intestinalis ATCC 50506]
Length = 187
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
I V+P QKGN +L ++ W YD+SI PDY + R+T LFLS+++H+ KP+YI RI
Sbjct: 2 IKVSPLQKGNNVLNYLSNASWHYDNSITPDYEINRSTALLFLSLRFHSCKPEYIHKRINK 61
Query: 131 LG--KLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETY 178
L K+ L V P+++ K + + LT++L +S +E I +
Sbjct: 62 LKPYKVKVLLVHVDIPNYS-KTIQELFDTTSLTMVLGFSIDECSRYIRGF 110
>gi|308494348|ref|XP_003109363.1| hypothetical protein CRE_08225 [Caenorhabditis remanei]
gi|308246776|gb|EFO90728.1| hypothetical protein CRE_08225 [Caenorhabditis remanei]
Length = 247
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 79/134 (58%), Gaps = 10/134 (7%)
Query: 70 AILVNPR-QKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
A++VN R Q+GNP+LK++ V +E+ D I PD+ G T ++LS KYH P+Y+ RI
Sbjct: 37 ALVVNRRRQEGNPVLKYVRNVRYEWGD-IGPDFECGPTFGVVYLSFKYHKQHPEYVYTRI 95
Query: 129 KALGK-LYKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFE 182
+ Y+ +V + ++P H L+ L +C +L++ ++ EEA E IE +K +
Sbjct: 96 NGKAENRYRNKVLLGYCNMEEPRHVLRELNMICFREAWSLVVVYTVEEAAEYIELFKTTQ 155
Query: 183 NKPPDLIMEKQDVD 196
K ++ ++K+ +D
Sbjct: 156 KK--EITIKKKAID 167
>gi|401827831|ref|XP_003888208.1| nucleotide excision repair endonuclease NEF1 subunit RAD10
[Encephalitozoon hellem ATCC 50504]
gi|392999408|gb|AFM99227.1| nucleotide excision repair endonuclease NEF1 subunit RAD10
[Encephalitozoon hellem ATCC 50504]
Length = 187
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
I V+P QKGN +L ++ W YD+SI PDY + + LFLS+++H KP+YI RI
Sbjct: 2 IKVSPLQKGNGVLDYLSNATWHYDNSITPDYEVNGSAALLFLSLRFHCCKPEYIYKRINK 61
Query: 131 LG--KLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDL 188
L K+ L V P+H+ K + + LT++L +S EE I+ + + D+
Sbjct: 62 LKPYKVRILLVHVDVPNHS-KMIRELFDTVSLTMVLGFSVEECSRYIQGFDAAGKRSIDV 120
Query: 189 I 189
I
Sbjct: 121 I 121
>gi|268564795|ref|XP_002639231.1| Hypothetical protein CBG03787 [Caenorhabditis briggsae]
Length = 233
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 74/127 (58%), Gaps = 9/127 (7%)
Query: 76 RQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGK-L 134
RQ+GNP+LK++ V +E+ D I PD+ G T ++LS KYH P+Y+ RI +
Sbjct: 29 RQEGNPVLKYVRNVRYEWGD-IGPDFECGPTFGVVYLSFKYHKQHPEYVYTRINGKAENR 87
Query: 135 YKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLI 189
Y+ +V + ++P H L+ L +C TL++ ++ EEA E IE +K + K ++
Sbjct: 88 YRNKVLLGYCNMEEPRHVLRELNMICFREAWTLVVVYTVEEAAEYIELFKTTQKK--EIT 145
Query: 190 MEKQDVD 196
++K+ +D
Sbjct: 146 VKKKAID 152
>gi|320583383|gb|EFW97596.1| DNA excision-repair protein, putative [Ogataea parapolymorpha DL-1]
Length = 298
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 10/123 (8%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDSIIP-DYVMGRTTCALFLSIKYHALKPDYIADRI 128
AI +N Q GNPLL+ + +V +E++ + DY++ +FLS++YH L P+YI ++I
Sbjct: 87 AIQINQNQTGNPLLQSLKQVAYEFNAKVKDVDYLINSHCVVVFLSLRYHKLHPEYIYNKI 146
Query: 129 KA---------LGKLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
K L ++ + VD + + +++ L ++CL +L L+LAWS ++ + + K
Sbjct: 147 KKITYNGSNRRLNRILLVLVDVDNSNDSIRELNKLCLFNELNLVLAWSFQQCADYLTFLK 206
Query: 180 VFE 182
E
Sbjct: 207 QCE 209
>gi|341898323|gb|EGT54258.1| hypothetical protein CAEBREN_04607 [Caenorhabditis brenneri]
Length = 263
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 74/127 (58%), Gaps = 9/127 (7%)
Query: 76 RQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGK-L 134
RQ+GNP+LK++ V +E+ D I PD+ G T ++LS KYH P+Y+ RI +
Sbjct: 58 RQEGNPVLKYVRNVRYEWGD-IGPDFECGPTFGVVYLSFKYHKQHPEYVYTRINGKAENR 116
Query: 135 YKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLI 189
Y+ +V + ++P H L+ L +C TL++ ++ EEA E IE +K + K ++
Sbjct: 117 YRNKVLLGYCNMEEPRHVLRELNMICFREAWTLVVVYTVEEAAEYIELFKTTQKK--EIT 174
Query: 190 MEKQDVD 196
++K+ +D
Sbjct: 175 IKKKVID 181
>gi|365759216|gb|EHN01020.1| Rad10p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 216
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDS-----IIPDYVMGRTTCALFLSIKYHALKPDYI 124
+LVN QK NPLL H+ W+Y S I DY++ R LFL++ YH L DYI
Sbjct: 98 TVLVNTTQKENPLLNHLKSTNWKYISSTGINKISYDYLV-RGRNVLFLTLTYHKLYVDYI 156
Query: 125 ADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
+ R++ L K + VD + L +T++C+ TL+LA++ E+A + IE
Sbjct: 157 SRRMQPLSKNENNILIFTVDDNNSEDTLNEITKLCIFNGFTLLLAFNFEQAAKYIE 212
>gi|45187521|ref|NP_983744.1| ADL351Wp [Ashbya gossypii ATCC 10895]
gi|44982259|gb|AAS51568.1| ADL351Wp [Ashbya gossypii ATCC 10895]
gi|374106957|gb|AEY95865.1| FADL351Wp [Ashbya gossypii FDAG1]
Length = 199
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 77/151 (50%), Gaps = 22/151 (14%)
Query: 44 PVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS-----II 98
P PAA +E+ P R S ILV+ QKGNPLLK + W Y S +
Sbjct: 61 PTPAA-----AETDLPKRP-RSGQGRTILVSTSQKGNPLLKGLASTNWTYVKSSGTEKVY 114
Query: 99 PDY-VMGRTTCALFLSIKYHALKPDYIADRIKALGK----LYKLQVDSKDPHHALKYLTR 153
DY V GR +FLS+KYH L+P+YI +++ GK + VD +D LK L +
Sbjct: 115 YDYQVQGRK--VVFLSLKYHKLRPEYIDQKLRPFGKTQGNILLCVVDIEDSEDILKELNK 172
Query: 154 VCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
+ T++LA++ E+A + Y VF NK
Sbjct: 173 TTMFNGFTMLLAFNFEQAAK----YLVFLNK 199
>gi|401624443|gb|EJS42500.1| rad10p [Saccharomyces arboricola H-6]
Length = 217
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDS-----IIPDYVMGRTTCALFLSIKYHALKPDYI 124
+LVN QK NP+L H+ W+Y S I DY++ R LFL++ YH L DYI
Sbjct: 99 TVLVNTTQKENPVLNHLKSTNWKYVSSTGINKIFYDYLV-RGRSVLFLTLTYHKLYVDYI 157
Query: 125 ADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
+ R++ L K + VD + L +T++C+ TL+LA++ E+A + IE
Sbjct: 158 SRRMQPLSKNENNILIFVVDDNNSEDTLNDITKLCMFNGFTLLLAFNFEQAAKYIE 213
>gi|150951154|ref|XP_001387425.2| ssDNA endonuclease and repair protein [Scheffersomyces stipitis CBS
6054]
gi|149388363|gb|EAZ63402.2| ssDNA endonuclease and repair protein [Scheffersomyces stipitis CBS
6054]
Length = 406
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 17/122 (13%)
Query: 71 ILVNPRQKGNPLLKH--IGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
ILVN Q GNPLLK + PW D+ I+ DY + LFLS+KYH LKP+Y+ R+
Sbjct: 151 ILVNRSQIGNPLLKESLMRITPWRQDNDILSDYYISPMLQILFLSLKYHKLKPEYVWTRL 210
Query: 129 KALG------------KLYK--LQVDSKDPHHAL-KYLTRVCLLCDLTLMLAWSPEEAGE 173
K L K+ + L V+ D H L + L+ C+ DL+L++A S EEAG
Sbjct: 211 KKLNGGSSSVNVNRNDKVLRVLLVVNDVDSHQDLVRDLSGFCIRNDLSLVIASSFEEAGN 270
Query: 174 MI 175
+
Sbjct: 271 YV 272
>gi|410074575|ref|XP_003954870.1| hypothetical protein KAFR_0A03000 [Kazachstania africana CBS 2517]
gi|372461452|emb|CCF55735.1| hypothetical protein KAFR_0A03000 [Kazachstania africana CBS 2517]
Length = 208
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDS-----IIPDYVMGRTTCALFLSIKYHALKPDYI 124
++LVN QK NPLL + W Y S I DY + R LFL++ YH L PDYI
Sbjct: 90 SVLVNTTQKENPLLNSLKNTNWRYISSTGGKKIYYDYFI-RNRSILFLTLSYHKLYPDYI 148
Query: 125 ADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
R+ +L K + VD+ + L LT+ C+ TL++ ++ E+A + IE
Sbjct: 149 TRRMASLSKNDDNILIFVVDTTNSEETLNELTKQCMFSGFTLLVVFNFEQAAKYIE 204
>gi|6323543|ref|NP_013614.1| Rad10p [Saccharomyces cerevisiae S288c]
gi|131776|sp|P06838.1|RAD10_YEAST RecName: Full=DNA repair protein RAD10
gi|4260|emb|CAA26433.1| unnamed protein product [Saccharomyces cerevisiae]
gi|4263|emb|CAA28856.1| unnamed protein product [Saccharomyces cerevisiae]
gi|575707|emb|CAA86642.1| RAD10 [Saccharomyces cerevisiae]
gi|151946071|gb|EDN64302.1| ssDNA endonuclease [Saccharomyces cerevisiae YJM789]
gi|190408151|gb|EDV11416.1| ssDNA endonuclease [Saccharomyces cerevisiae RM11-1a]
gi|207342581|gb|EDZ70306.1| YML095Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270053|gb|EEU05299.1| Rad10p [Saccharomyces cerevisiae JAY291]
gi|259148480|emb|CAY81725.1| Rad10p [Saccharomyces cerevisiae EC1118]
gi|285813909|tpg|DAA09804.1| TPA: Rad10p [Saccharomyces cerevisiae S288c]
gi|323352940|gb|EGA85240.1| Rad10p [Saccharomyces cerevisiae VL3]
gi|349580195|dbj|GAA25355.1| K7_Rad10p [Saccharomyces cerevisiae Kyokai no. 7]
gi|224837|prf||1202263A gene RAD10
Length = 210
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 64 ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS-----IIPDYVMGRTTCALFLSIKYHA 118
+++ +LVN QK NPLL H+ W Y S I DY++ R LFL++ YH
Sbjct: 86 STRPGKTVLVNTTQKENPLLNHLKSTNWRYVSSTGINMIYYDYLV-RGRSVLFLTLTYHK 144
Query: 119 LKPDYIADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEM 174
L DYI+ R++ L + + VD + L +T++C+ TL+LA++ E+A +
Sbjct: 145 LYVDYISRRMQPLSRNENNILIFIVDDNNSEDTLNDITKLCMFNGFTLLLAFNFEQAAKY 204
Query: 175 IE 176
IE
Sbjct: 205 IE 206
>gi|323303693|gb|EGA57480.1| Rad10p [Saccharomyces cerevisiae FostersB]
Length = 210
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 64 ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS-----IIPDYVMGRTTCALFLSIKYHA 118
+++ +LVN QK NPLL H+ W Y S I DY++ R LFL++ YH
Sbjct: 86 STRPGKTVLVNTTQKENPLLNHLKSTNWRYVSSTGINMIYYDYLV-RGRSXLFLTLTYHK 144
Query: 119 LKPDYIADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEM 174
L DYI+ R++ L + + VD + L +T++C+ TL+LA++ E+A +
Sbjct: 145 LYVDYISRRMQPLSRNENNILIFIVDDNNSEDTLNDITKLCMFNGFTLLLAFNFEQAAKY 204
Query: 175 IE 176
IE
Sbjct: 205 IE 206
>gi|255715823|ref|XP_002554193.1| KLTH0E16390p [Lachancea thermotolerans]
gi|238935575|emb|CAR23756.1| KLTH0E16390p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 16/133 (12%)
Query: 62 AGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS-----IIPDY-VMGRTTCALFLSIK 115
AS +LV+ Q+GNPLL + W Y S + DY V GR +FLS+K
Sbjct: 78 GNASAQGKTVLVSSSQRGNPLLSSMANTNWRYVSSTGGNKVYYDYCVQGRNI--IFLSLK 135
Query: 116 YHALKPDYIADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEA 171
YH L P+YI+ +I+ L K + VD ++ + LK L + C+ L+LA++ E+A
Sbjct: 136 YHKLHPEYISKKIQPLVKNKNNILICVVDVENSENILKDLNKACMFNGFALLLAFNFEQA 195
Query: 172 GEMIETYKVFENK 184
+ Y +F NK
Sbjct: 196 AK----YIIFMNK 204
>gi|323336156|gb|EGA77427.1| Rad10p [Saccharomyces cerevisiae Vin13]
gi|323347271|gb|EGA81545.1| Rad10p [Saccharomyces cerevisiae Lalvin QA23]
Length = 210
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 64 ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS-----IIPDYVMGRTTCALFLSIKYHA 118
+++ +LVN QK NPLL H+ W Y S I DY++ R LFL++ YH
Sbjct: 86 STRPGKTVLVNTTQKENPLLNHLKSTNWRYVSSTGINMIYYDYLV-RGRSVLFLTLTYHK 144
Query: 119 LKPDYIADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEM 174
L DYI+ R++ L + + VD + L +T++C+ T++LA++ E+A +
Sbjct: 145 LYVDYISRRMQPLSRNENNILIFIVDDNNSEDTLNDITKLCMFNGFTVLLAFNFEQAAKY 204
Query: 175 IE 176
IE
Sbjct: 205 IE 206
>gi|156836915|ref|XP_001642497.1| hypothetical protein Kpol_309p8 [Vanderwaltozyma polyspora DSM
70294]
gi|156113033|gb|EDO14639.1| hypothetical protein Kpol_309p8 [Vanderwaltozyma polyspora DSM
70294]
Length = 233
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDS-----IIPDYVMGRTTCALFLSIKYHALKPDYI 124
++LVN QK NPLL H+ W Y S I DY + + LFL++ YH L DYI
Sbjct: 115 SVLVNTTQKENPLLNHLKNTNWRYISSSGGNKIYYDYFV-KQRAVLFLTLSYHKLYADYI 173
Query: 125 ADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIE 176
+ R+ L K + VD + +L+ +T++C+ TL+LA++ E+A + IE
Sbjct: 174 SRRMIPLSKNDNNVLIFIVDDSNSEDSLREITKMCMFNGFTLLLAFNFEQAAKYIE 229
>gi|255070197|ref|XP_002507180.1| predicted protein [Micromonas sp. RCC299]
gi|226522455|gb|ACO68438.1| predicted protein [Micromonas sp. RCC299]
Length = 221
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Query: 51 SATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCAL 110
++T ES A + + + ++++ Q GN L+ + V W D I PD+V ++CAL
Sbjct: 4 TSTLESRNSELAKHANAGDLLIISRSQTGNGLVHRLHNVCWAID-YINPDFVFSSSSCAL 62
Query: 111 FLSIKYHALKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLA 165
F S+K+ +L P ++ R+ L Y L+ VD +D + +L + R L D L+ A
Sbjct: 63 FASLKFQSLHPTHLHTRVCGLSDSYALRIVVCLVDDEDENSSLPEVNRSAGLGDCALVCA 122
Query: 166 WSPEEAGEMIETYKVFE 182
WS +EA IE + E
Sbjct: 123 WSLDEAARYIEFFHGCE 139
>gi|254576825|ref|XP_002494399.1| ZYRO0A00550p [Zygosaccharomyces rouxii]
gi|238937288|emb|CAR25466.1| ZYRO0A00550p [Zygosaccharomyces rouxii]
Length = 206
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 16/142 (11%)
Query: 49 QNSATSES-VQPSRAGA-----SKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS-----I 97
Q SAT +S +GA S + ++LVN QK NPLL H+ W Y S I
Sbjct: 61 QRSATGDSNTNEETSGAAPIRVSNTGKSVLVNTTQKANPLLNHLKNTNWRYVSSTGGNKI 120
Query: 98 IPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGK----LYKLQVDSKDPHHALKYLTR 153
DY++ + LFL++ YH L +YI+ R+ L + + VD K+ L +T+
Sbjct: 121 YYDYLI-KNRSVLFLTLTYHKLYTEYISRRMLPLQRSDDNILIFVVDDKNSEDILTEITK 179
Query: 154 VCLLCDLTLMLAWSPEEAGEMI 175
+C+ TL++A++ E+A + I
Sbjct: 180 LCMFKGFTLLVAFNFEQAAKYI 201
>gi|68474733|ref|XP_718574.1| hypothetical protein CaO19.10006 [Candida albicans SC5314]
gi|68474898|ref|XP_718490.1| hypothetical protein CaO19.2469 [Candida albicans SC5314]
gi|46440258|gb|EAK99566.1| hypothetical protein CaO19.2469 [Candida albicans SC5314]
gi|46440348|gb|EAK99655.1| hypothetical protein CaO19.10006 [Candida albicans SC5314]
gi|238878970|gb|EEQ42608.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 338
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 44 PVPAAQNSATSESVQPSRAGASKSS-NAILVNPRQKGNPLLKH--IGKVPWEYDDSIIPD 100
P+P +N+ SV+PS S + ILV+ Q+GNPLL + PW +D S++ D
Sbjct: 91 PIPPKRNN---NSVKPSTKRTQTSGPSDILVSRSQEGNPLLSTPIMQATPWSFDKSLLSD 147
Query: 101 YVMGRTTCALFLSIKYHALKPDYIADRIKALGK------------LYKLQVDSKDPHHA- 147
Y + +FL++KYH L P++I +R K L + L L V H
Sbjct: 148 YYINPKFQIIFLTLKYHKLHPEHIWNRWKKLNQGSSTVHTRGDDALRVLLVVVDVDSHQD 207
Query: 148 -LKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKP 185
L+ L+ C+ DL+L+LAWS EEA I K + P
Sbjct: 208 LLRKLSDFCIKHDLSLVLAWSYEEAANYIALCKQLDKAP 246
>gi|291414832|ref|XP_002723664.1| PREDICTED: excision repair cross-complementing 1 isofrom 2-like
[Oryctolagus cuniculus]
Length = 301
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 68 SNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTC-----ALFLSIKYHALKPD 122
SN+I+V+PRQ P G + + + P G T + + ++YH L PD
Sbjct: 98 SNSIVVSPRQ---PREWVKGTLVFLPGLRLFPKRTKGANTGMSSNPSSAVLLRYHHLHPD 154
Query: 123 YIADRIKALGKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIET 177
YI R+++LGK + L QVD + C+L D +L L SPEEA +ET
Sbjct: 155 YIHARLQSLGKSFALRVLLVQVDVVSGLAPAASCPQPCILSDCSLALPPSPEEAARYLET 214
Query: 178 YKVFENKPPDLIMEK 192
YK +E KP DL+MEK
Sbjct: 215 YKAYEQKPADLLMEK 229
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 2 LAWSPEEAGEMIETYKVFENKPPDLIMEK 30
L SPEEA +ETYK +E KP DL+MEK
Sbjct: 201 LPPSPEEAARYLETYKAYEQKPADLLMEK 229
>gi|50307083|ref|XP_453520.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642654|emb|CAH00616.1| KLLA0D10307p [Kluyveromyces lactis]
Length = 233
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 19/151 (12%)
Query: 44 PVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS-----II 98
PV Q A ES ++ +SK+ + V+ Q GNPLLK + V W Y S +
Sbjct: 92 PVIHNQKKAVQESSFADKSSSSKT---MFVSSSQTGNPLLKSLVNVNWRYVKSTPTTQVH 148
Query: 99 PDY-VMGRTTCALFLSIKYHALKPDYIADRI----KALGKLYKLQVDSKDPHHALKYLTR 153
DY + GR +FLS+KYH L P+YI ++ + G + VD ++ L+ L +
Sbjct: 149 YDYQIRGRN--VIFLSLKYHKLHPEYIGKKLLPFKRTEGNVLLCVVDVENSEDILRELNK 206
Query: 154 VCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
VC+ T++LA++ E+AG+ Y F NK
Sbjct: 207 VCMFQGFTILLAFTFEQAGK----YLTFMNK 233
>gi|340939111|gb|EGS19733.1| mating-type switching protein swi10-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1329
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 35/140 (25%)
Query: 59 PSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
PSR+ S + ILV+PRQKGNP+L TC L++KYH
Sbjct: 591 PSRS----SGSTILVSPRQKGNPVL-----------------------TC---LNLKYHR 620
Query: 119 LKPDYIADRIKALGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE 173
L P+YI RI+ L Y L+ VD + AL+ LT+ ++ ++T++L WS EA
Sbjct: 621 LHPEYIYTRIRNLQGKYNLRILLVLVDIPNHEDALRELTKTSVVNNVTIILTWSAAEAAR 680
Query: 174 MIETYKVFENKPPDLIMEKQ 193
+E YK +E+ I +Q
Sbjct: 681 YLELYKSYEHAGFSAIKGQQ 700
>gi|444318575|ref|XP_004179945.1| hypothetical protein TBLA_0C06310 [Tetrapisispora blattae CBS 6284]
gi|387512986|emb|CCH60426.1| hypothetical protein TBLA_0C06310 [Tetrapisispora blattae CBS 6284]
Length = 239
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 19/131 (14%)
Query: 60 SRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEY-----DDSIIPDYVM-GRTTCALFLS 113
+R+ +K+ +LVN Q+ NPLL H+ W Y I DY + GR+ LFL+
Sbjct: 110 NRSNLTKT---VLVNSTQRENPLLNHLKNTNWRYYKPPAGTKIYYDYFLHGRS--VLFLT 164
Query: 114 IKYHALKPDYIADRIKALGK--------LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLA 165
+ YH L DYI R+K + VD + +K LT++C+ TL+LA
Sbjct: 165 LSYHKLYNDYITRRMKPFTSSSNNSDNNILIFVVDDSNSEDTVKDLTKICMFNGFTLLLA 224
Query: 166 WSPEEAGEMIE 176
++ E+A + IE
Sbjct: 225 FNFEQAAKYIE 235
>gi|50292713|ref|XP_448789.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528102|emb|CAG61759.1| unnamed protein product [Candida glabrata]
Length = 223
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 60 SRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYD-----DSIIPDYVMGRTTCALFLSI 114
+++G++ +LV+ QK NPLL H+ W Y I DY + + LFL++
Sbjct: 94 TQSGSTNVGKTVLVSTTQKENPLLNHLKNTNWRYSKPQPGQKIYYDYKV-KNRSILFLTL 152
Query: 115 KYHALKPDYIADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEE 170
YH L DYI R+ L + + VD + L +T++CL TL+LA++ ++
Sbjct: 153 SYHKLYVDYIERRMLPLKQNNDNILIFVVDDTNSEEILTTITKICLFNGFTLLLAFNFQQ 212
Query: 171 AGEMIETYKVF 181
A + +E F
Sbjct: 213 AAKYLEGLNSF 223
>gi|403216922|emb|CCK71418.1| hypothetical protein KNAG_0G03610 [Kazachstania naganishii CBS
8797]
Length = 218
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
Query: 43 DPVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS-----I 97
D A S T QP+ A +LVN QK NPLL + W Y S I
Sbjct: 71 DTDSRATGSTTQNKFQPTVAKGPSLGKTVLVNTTQKENPLLADLKNTAWRYISSTATRKI 130
Query: 98 IPDYVMGRTTCALFLSIKYHALKPDYIADRIKAL-----GKLYKLQVDSKDPHHALKYLT 152
DY + + LFL++ YH L PDY+ R+ L L ++ D L +T
Sbjct: 131 YYDYFI-KNRSVLFLTLSYHKLYPDYLERRMLPLKVNENNILIFVKDDDSHSEETLTEIT 189
Query: 153 RVCLLCDLTLMLAWSPEEAGEMIE 176
++ + TL+LA++ E+A + IE
Sbjct: 190 KIAMFNGFTLLLAFNFEQAAKYIE 213
>gi|341886848|gb|EGT42783.1| hypothetical protein CAEBREN_32406 [Caenorhabditis brenneri]
Length = 302
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 12/127 (9%)
Query: 76 RQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGK-L 134
RQ+GNP+LK++ V +E+ D I PD+ G T ++LS KYH P+Y+ RI +
Sbjct: 147 RQEGNPVLKYVRNVRYEWGD-IGPDFECGPTFGIVYLSFKYHKQHPEYVYTRINGKAENR 205
Query: 135 YKLQV-----DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLI 189
Y+ +V + ++P H L+ L +C TL++ EEA E IE +K + K ++
Sbjct: 206 YRNKVLLGYCNMEEPRHVLRELNMICFREAWTLVVV---EEAAEYIELFKTTQKK--EIT 260
Query: 190 MEKQDVD 196
++K+ +D
Sbjct: 261 IKKKVID 267
>gi|429965378|gb|ELA47375.1| DNA repair protein rad10 [Vavraia culicis 'floridensis']
Length = 195
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIK 129
AI VN Q+GN +L ++ +V W Y+D + D+ + LFLS+++H KP+YI R+
Sbjct: 2 AIKVNSNQRGNNVLDYLNQVKWYYEDGLTTDFEIENFISVLFLSLRFHLCKPEYIIARLN 61
Query: 130 ALGKLYKLQV--DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPD 187
L K Y+ + D H+ ++++ D + L +S +EA + V ++ +
Sbjct: 62 NL-KEYRTSILLIYIDMHNYEEHMSEFVQF-DCQIFLCFSNDEAAMYLAAIDVNAHRSTE 119
Query: 188 LIMEKQDVDPHSKTWNF 204
+I + D H + F
Sbjct: 120 IIKHRYSFDLHERKIEF 136
>gi|323307802|gb|EGA61064.1| Rad10p [Saccharomyces cerevisiae FostersO]
Length = 205
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 64 ASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDS-----IIPDYVMGRTTCALFLSIKYHA 118
+++ +LVN QK NPLL H+ W Y S I DY++ R LFL++ YH
Sbjct: 86 STRPGKTVLVNTTQKENPLLNHLKSTNWRYVSSTGINMIYYDYLV-RGRSVLFLTLTYHK 144
Query: 119 LKPDYIADRIKALGK----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWS 167
L DYI+ R++ L + + VD + L +T++C+ TL+LA++
Sbjct: 145 LYVDYISRRMQPLSRNENNILIFIVDDNNSEDTLNDITKLCMFNGFTLLLAFN 197
>gi|66827727|ref|XP_647218.1| DNA excision repair protein 1 [Dictyostelium discoideum AX4]
gi|74859525|sp|Q55GG6.1|ERCC1_DICDI RecName: Full=DNA excision repair protein ERCC-1
gi|60475359|gb|EAL73294.1| DNA excision repair protein 1 [Dictyostelium discoideum AX4]
Length = 514
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 71 ILVNPRQKGNPLLKHIGK-VPWEYDDSIIPDYVMGRTTCALFL-SIKYHALKPDYIADRI 128
I N +Q+G+ ++ K + EY + PD+++ T +L S+K H P+ I DRI
Sbjct: 217 IYANSKQRGSLMMNSFSKNIIIEYSELQYPDFILNSNTLVFYLPSLKTHRDNPNLIQDRI 276
Query: 129 KALGKL------YKLQV--------DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEM 174
K L L + L++ DS + + L + + TL++ WS EA +
Sbjct: 277 KGLSTLMTNSDSFTLRILLVFADLSDSDNCEQFINELNLIAIKLQFTLIVCWSQIEAAKY 336
Query: 175 IETYKVFENKPPDLI 189
+E YK F N+ PD I
Sbjct: 337 LEAYKTFNNRAPDPI 351
>gi|84998118|ref|XP_953780.1| DNA repair protein (RAD10 ) [Theileria annulata]
gi|65304777|emb|CAI73102.1| DNA repair protein (RAD10 homologue), putative [Theileria annulata]
Length = 216
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 19/125 (15%)
Query: 69 NAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRI 128
N ++++PRQ+ NP+L+ I VP+ D I PD+++ LFLS+KYH + +YI +R+
Sbjct: 10 NNLIISPRQRKNPILRFIKNVPYIEGD-IAPDFIISSDIYVLFLSLKYHRVNINYIKNRL 68
Query: 129 KALGKLYKL-------QVDSKDPHHAL-KYL----TRVCLLC-----DLTLMLAWSPEEA 171
++L + YK+ Q+D D + L K+L T V LL ++L+W+ E+
Sbjct: 69 ESLSQ-YKIKNLFIICQIDVSDYNQLLSKFLDLQWTIVNLLTITFGYGCKILLSWNARES 127
Query: 172 GEMIE 176
++E
Sbjct: 128 AAIVE 132
>gi|313231072|emb|CBY19070.1| unnamed protein product [Oikopleura dioica]
gi|313241149|emb|CBY33443.1| unnamed protein product [Oikopleura dioica]
Length = 229
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
I V+P Q NP+L+ KVP++ D I D+ L+LS+KY+ + YI +R++
Sbjct: 35 IQVSPDQALNPVLQRFTKVPYQVSD-IPTDFQTSHDVGILWLSLKYYNYRRTYIEERVEK 93
Query: 131 L-GKLYKL-----QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
L G KL VD+ + A + L+ + + TL++A++ +EA IET+K + NK
Sbjct: 94 LKGTSLKLIIVLLYVDNPNAEDAARTLSILSCRFNFTLLVAFNLQEAASHIETFKRYANK 153
Query: 185 PPDLIMEKQD 194
P+ + K D
Sbjct: 154 GPETLKGKFD 163
>gi|403331490|gb|EJY64695.1| Excision repair enzyme ERCC-1 [Oxytricha trifallax]
Length = 338
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 67 SSNAILVNPRQKGNPLLKHI--------GKVPWEYDDSIIPDYVMGRTTCALFLSIKYHA 118
+ N + VN +Q+ NPLLK+ + P + DY + LFL + YH
Sbjct: 67 NRNQVKVNKKQETNPLLKYSRFQYILVDDQNPQHQTSPMFEDYDINEKVSLLFLQLSYHI 126
Query: 119 LKPDYIADRI-------KALGKLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEA 171
P YI R+ K K+ + D KD + + L C+ + +++ WS EEA
Sbjct: 127 AYPLYIIQRLEDIYRHRKTRNKMLLVLNDDKDDQNMINGLLMECIKFETKMIMCWSFEEA 186
Query: 172 GEMIETYKVFENKPPDLI 189
+ I+T+K +ENK ++
Sbjct: 187 AQYIQTFKSYENKTQTML 204
>gi|403221359|dbj|BAM39492.1| DNA repair protein [Theileria orientalis strain Shintoku]
Length = 191
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 62 AGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKP 121
A + ++V+PRQ+ NP+L+ I V + D I D+++ + LFLS+KYH +
Sbjct: 3 TNAINQDDQLIVSPRQRKNPVLRFIKNVSYIEGD-IASDFMISKDIGVLFLSLKYHRVNT 61
Query: 122 DYIADRIKA-----LGKLYKL-QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMI 175
YI +R+++ L L+ L QVD D L L ++L+WS E+ +I
Sbjct: 62 KYITNRLESLVPFRLRNLFLLCQVDVNDYDKLLLGLLTSTFGYGCKILLSWSARESAAVI 121
Query: 176 ETYKVFENKPPDLIMEKQDVDPHSKT 201
E K+ K + + +KQ + H+++
Sbjct: 122 EILKLNRYKGIESLNKKQ-IKTHNES 146
>gi|154420258|ref|XP_001583144.1| DNA repair protein rad10 containing protein [Trichomonas vaginalis
G3]
gi|121917384|gb|EAY22158.1| DNA repair protein rad10 containing protein [Trichomonas vaginalis
G3]
Length = 196
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
I+++ RQK NP+++ + +P + + DY++G LFLS+K+H P Y+ +R+K
Sbjct: 5 IVISNRQKDNPMIELLKGIPCNWIEDDCADYIVGSDIGVLFLSLKFHRQYPRYLEERVKK 64
Query: 131 LGKLYKLQ-----VDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGE-MIETY 178
+K + VD +DP A+ LTR +TL+LA+ +E +I Y
Sbjct: 65 FQGNFKSRVLLTLVDVEDPDLAISKLTRTAQGSYMTLVLAFKYDEVARWLISMY 118
>gi|397607163|gb|EJK59580.1| hypothetical protein THAOC_20175 [Thalassiosira oceanica]
Length = 321
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 16/127 (12%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIAD 126
S++ + ++ +QKGNP+L HI VP ++ ++PDY+ T A LK D+
Sbjct: 101 SAHVLHISQKQKGNPVLLHIRNVPHKFS-PMVPDYIFAPTRIA--------ELKNDFEFR 151
Query: 127 RIKALGKLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPP 186
+ L VD +D + + +L + + +LTL+LAWS +EA +ET K F+ K
Sbjct: 152 MLLCL-------VDLEDNTNPILFLNDLSVQNNLTLILAWSEQEAARYLETVKAFDGKDL 204
Query: 187 DLIMEKQ 193
+I +++
Sbjct: 205 SMIQKRE 211
>gi|429963290|gb|ELA42834.1| DNA repair protein rad10 [Vittaforma corneae ATCC 50505]
Length = 188
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 77 QKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALG---- 132
Q+GN L++++ W +D S DY + +T LFLS+K+H+ KP+YI RI L
Sbjct: 8 QRGNKLIEYLNAASWHFDASCSADYEINFSTLILFLSLKFHSAKPEYIYKRIAKLKEAKL 67
Query: 133 KLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEK 192
++ + +D+ + + +L+ L R + ++L + EE + I+ + + + +++ K
Sbjct: 68 RILLILIDAPNFNTSLQELFRT---VPIIIVLCRTYEECSKYIKGFDLCSKRGVEILRNK 124
Query: 193 -QDVDPHSKTWN 203
VD +T+N
Sbjct: 125 DSTVDTFLQTFN 136
>gi|428673258|gb|EKX74171.1| DNA repair protein rad10, putative [Babesia equi]
Length = 206
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 66 KSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIA 125
++ + ++++PRQ+ NPL+K + + D I D+++ LFLS+KYH L +YI
Sbjct: 7 RNDDHLIISPRQRRNPLVKCFRNITFVESD-IPADFMISPEISVLFLSLKYHRLHSNYII 65
Query: 126 DRIKALGK-----LYKL-QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYK 179
+RIK++ + L+ L QVD + + L LT ++L+W+ E+ +IE K
Sbjct: 66 ERIKSIRQHKIPNLFILCQVDIAEFANILNQLTVHTFTYGYKILLSWNCHESAAVIEILK 125
Query: 180 VFENKPPDLIMEKQDVDPHSKT 201
+ K + I+ K++ H +T
Sbjct: 126 LNYYKGIE-ILNKKETKTHFET 146
>gi|300706893|ref|XP_002995679.1| hypothetical protein NCER_101359 [Nosema ceranae BRL01]
gi|239604871|gb|EEQ82008.1| hypothetical protein NCER_101359 [Nosema ceranae BRL01]
Length = 187
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 11/130 (8%)
Query: 71 ILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKA 130
I +N +Q+ N ++ ++ + Y D+I DY + T LFLS+++H KP+YI R+
Sbjct: 2 IRINNKQRANSVISYLTDSSYTYVDNITTDYEINDTISVLFLSLRFHCAKPEYIYKRLNK 61
Query: 131 LGKLYKLQV-----DSKD-PHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENK 184
L K YKL V DS + L+ +V + TL+L +S EE ++ + +N+
Sbjct: 62 L-KPYKLSVILLYIDSDNYSSTLLEMFDKV----ESTLLLGFSNEECARYLKGLDINQNR 116
Query: 185 PPDLIMEKQD 194
+++ K++
Sbjct: 117 SINVLRRKEE 126
>gi|440492189|gb|ELQ74779.1| Structure-specific endonuclease ERCC1-XPF, ERCC1 component, partial
[Trachipleistophora hominis]
Length = 208
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIK 129
I V+ +Q+GN +L H+ +V W Y+D + D+ + LFLS+++H+ KP+YI R+
Sbjct: 15 TIKVSTKQRGNNVLDHLNQVKWYYEDGLTTDFEIEHFISVLFLSLRFHSSKPEYIIARLN 74
Query: 130 ALGKLYKLQV--DSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPD 187
L K YK + D H+ +Y+ + + L + +EA + + + ++ +
Sbjct: 75 NL-KEYKTNILLIYVDMHNYEEYMVEFVQF-ECQVFLCFGNDEAAKYLAAIDMNAHRSTE 132
Query: 188 LIMEKQDVDPHSKTWNF 204
+I + D + + F
Sbjct: 133 IIKHRYSFDLYERKIEF 149
>gi|290973391|ref|XP_002669432.1| predicted protein [Naegleria gruberi]
gi|284082979|gb|EFC36688.1| predicted protein [Naegleria gruberi]
Length = 597
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 49/172 (28%)
Query: 67 SSNAILVNPRQKGNPLLKHIGKVPWEY---DDSIIPDYVMGRTTCALFLSIKYHALKPDY 123
++ I+ N QK NP++KHI ++ D + DY++GR T A +LS+K+H KP Y
Sbjct: 226 TATTIVANEVQKKNPIVKHIRDKVFKLHFTKDWTLTDYILGRQTTAFYLSLKFHMTKPKY 285
Query: 124 IADRIKALGKL----------------YKLQVDS----------------------KDPH 145
I +RIK K + VD+ K P
Sbjct: 286 ILERIKNFHKTEICKRGTFTNRIILVNVDVHVDACGDSSIYLSNHQDSQGENGGTFKAPT 345
Query: 146 H--------ALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLI 189
+ AL +TR+ + D T++ +S EE +ET + E K LI
Sbjct: 346 YVSETALDEALIEVTRISMWADWTVICGFSDEECALYLETIRACETKGSSLI 397
>gi|241698610|ref|XP_002413128.1| excision repair cross-complementing 1 ercc1, putative [Ixodes
scapularis]
gi|215506942|gb|EEC16436.1| excision repair cross-complementing 1 ercc1, putative [Ixodes
scapularis]
Length = 111
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 157 LCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 200
+ + TLMLAWS EEAG IETYKVFE+K DL+MEK + D K
Sbjct: 1 MGECTLMLAWSAEEAGRHIETYKVFESKSADLLMEKSEDDVFGK 44
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 28/38 (73%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSK 38
MLAWS EEAG IETYKVFE+K DL+MEK + D K
Sbjct: 7 MLAWSAEEAGRHIETYKVFESKSADLLMEKSEDDVFGK 44
>gi|401837330|gb|EJT41272.1| RAD10-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 179
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 70 AILVNPRQKGNPLLKHIGKVPWEYDDS-----IIPDYVMGRTTCALFLSIKYHALKPDYI 124
+LVN QK NPLL H+ W+Y S I DY++ R LFL++ YH L DYI
Sbjct: 98 TVLVNTTQKENPLLNHLKSTNWKYISSTGINKISYDYLV-RGRNVLFLTLTYHKLYVDYI 156
Query: 125 ADRIKALGK 133
+ R++ L K
Sbjct: 157 SRRMQPLSK 165
>gi|378755159|gb|EHY65186.1| hypothetical protein NERG_01632 [Nematocida sp. 1 ERTm2]
Length = 212
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 74 NPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGK 133
N Q+GN L+K+I K P EY ++ DY G L ++++ H P YI RI+ +
Sbjct: 4 NELQRGNALIKYIKKTPIEYKYTVF-DYEPGEYFGVLHITLQLHMSSPQYIFGRIERIKS 62
Query: 134 -----------LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIET 177
L + S A L C+ + ++ A+SP E + IET
Sbjct: 63 SNSKRVPIIILLLSADITSASAASAFTTLQIDCMATGVRIIPAYSPVECAKYIET 117
>gi|298713770|emb|CBJ27142.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 162
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 138 QVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 196
VD D L + ++ + D TL+LAWS +EA +ETYK +E+K D I EK D D
Sbjct: 25 HVDVDDSETPLLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDD 83
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 1 MLAWSPEEAGEMIETYKVFENKPPDLIMEKQDVD 34
+LAWS +EA +ETYK +E+K D I EK D D
Sbjct: 50 VLAWSLQEAARYLETYKAYEHKSADSIQEKVDDD 83
>gi|387593569|gb|EIJ88593.1| hypothetical protein NEQG_01283 [Nematocida parisii ERTm3]
gi|387597223|gb|EIJ94843.1| hypothetical protein NEPG_00367 [Nematocida parisii ERTm1]
Length = 213
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 73 VNPRQKGNPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALG 132
V+ QKGN L+ HI +VP EY ++ DY G L +++ H P YI +RI+ +
Sbjct: 3 VSELQKGNILITHIKRVPIEYKYTVF-DYEPGEYFGVLHITLHLHISSPQYIFNRIERIK 61
Query: 133 K-----------LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVF 181
L + + L C+ ++ ++ A++P E + IE ++
Sbjct: 62 DTKSTRVPIILLLINQDITTLSTSSVFTKLQIDCISLNIRIIPAYTPVECAKYIENMHLY 121
Query: 182 ENKPPDL 188
+N+ L
Sbjct: 122 KNELVHL 128
>gi|294916203|ref|XP_002778353.1| excision repair cross-complementing rodent repair
deficiency,complementation group 1, putative [Perkinsus
marinus ATCC 50983]
gi|239886666|gb|EER10148.1| excision repair cross-complementing rodent repair
deficiency,complementation group 1, putative [Perkinsus
marinus ATCC 50983]
Length = 113
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 80 NPLLKHIGKVPWEYDDSIIPDYVMGRTTCALFLSIKYHALKPDYIADRIKALGK------ 133
+P + H+ +D++++PD+ + T L+ ++ + K D + RI+ LGK
Sbjct: 1 DPAVNHLVNAAAFFDEALVPDFAVENNTAILYTTLGTYRRKRDELPRRIRELGKVKPPYH 60
Query: 134 ----LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIET 177
L + + + + L+ L + + L+L+LAWS E I+T
Sbjct: 61 VNVLLCLVDIPAAEAGECLESLNLIAVNTGLSLLLAWSSVEVSRYIQT 108
>gi|412990196|emb|CCO19514.1| predicted protein [Bathycoccus prasinos]
Length = 187
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 73 VNPRQKGNPLLKHIGKVPWEYDD---SIIPDYVMGRTTCALFLSIKYHALKPDYIAD--- 126
+N +G+ +L+++ + ++ D PD R TC +LS++ P Y++
Sbjct: 1 MNNALRGHIVLQYVNQTELQFSDIQGGSFPD----RKTCIFYLSLRNLVANPQYLSSCTF 56
Query: 127 RIKALGKLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEEAGEMIETYKVFENKPP 186
I+ + VD+ D + +++ + + C L ++L+LAW E G +ET V +
Sbjct: 57 NIEFERLILICYVDTPDVN-SIEAVNKFCCLNAISLILAWDNAELGRYVETITVLLKETG 115
Query: 187 DLIMEKQDVDPHSKTW 202
I E ++D + T+
Sbjct: 116 --IGECNNLDFLTITF 129
>gi|344249242|gb|EGW05346.1| DNA excision repair protein ERCC-1 [Cricetulus griseus]
Length = 111
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 5 SPEEAGEMIETYKVFENKPPDLIMEKQDVDPHSKTWNFDPVPAAQNSATSESV 57
S EEAG +ETYK +E KP DL+MEK + + S+ + N S+++
Sbjct: 14 SAEEAGRYLETYKAYEQKPADLLMEKLEQNFLSRATECLTTVKSVNKTDSQTL 66
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 167 SPEEAGEMIETYKVFENKPPDLIMEK 192
S EEAG +ETYK +E KP DL+MEK
Sbjct: 14 SAEEAGRYLETYKAYEQKPADLLMEK 39
>gi|440294799|gb|ELP87744.1| Mating-type switching protein swi10, putative [Entamoeba invadens
IP1]
Length = 252
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 61 RAGASKSSNAILVNPRQKGNPLLKHIGKVPWEYDDSIIP-DYVMGRTTCALFLSIKYHAL 119
+ G S++ I NP QK N +L K YD ++ P D+V G FLS KY+
Sbjct: 2 KHGMSQNIYLIRANPIQKNNHVLVDSIKRKIIYDKTVAPGDFVGGNRVVLFFLSYKYYIT 61
Query: 120 KPDY---IADRIKALGK------LYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSPEE 170
Y I +++K + K L+ L ++ D + + + + L+++ S E
Sbjct: 62 NKPYLGVIIEKMKTVPKYQQRVVLFVLDEENYD-QNVICEINLAIFPTNGVLVISQSYAE 120
Query: 171 AGEMIETYKVFEN 183
A +E Y +N
Sbjct: 121 AARYVEEYSCVKN 133
>gi|326526725|dbj|BAK00751.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 516
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 130 ALGKLYKLQVDSKDPHHALKYLTR------VCLLCDLTLMLAWSPEEAGEMIETYKV-FE 182
+G L+ L S PHHA++ L R + C L +++A SP+ A E+++T+ V F
Sbjct: 51 VIGHLHHLAGSSVPPHHAMRDLARRYGPLMLLKFCQLPVLVATSPDAAREIMKTHDVAFA 110
Query: 183 NKP 185
++P
Sbjct: 111 SRP 113
>gi|443921170|gb|ELU40907.1| Rad10 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 314
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 37/106 (34%)
Query: 115 KYHALKPDYIADRIKALGKLYKLQVDSKDPHHALKYLTRVCLLCDLTLMLAWSP------ 168
KYH L P YI R + LGK Y ++ + +LCD ++ + SP
Sbjct: 43 KYHHLHPQYIFSRFEKLGKNYDNRI--------------LLILCD--VVSSMSPFACFFL 86
Query: 169 ---------------EEAGEMIETYKVFENKPPDLIMEKQDVDPHS 199
+E G+ + TYK++E K +I E+ D D S
Sbjct: 87 TAPKSEHQSSIKELTKEVGQYLATYKLYEFKSHQIIKERVDNDYQS 132
>gi|156040683|ref|XP_001587328.1| hypothetical protein SS1G_12358 [Sclerotinia sclerotiorum 1980]
gi|154696414|gb|EDN96152.1| hypothetical protein SS1G_12358 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 95
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 36 HSKTWNFDPVPAAQNSATSESVQPSRAGASKSSNAILVNPRQKGNPLLK 84
H TWNF AQN+ TS + P A ++S+ L PR +G+ +K
Sbjct: 16 HRSTWNFGTNATAQNNLTSSGISPRMAICVRNSHGFLA-PRSRGDASIK 63
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,513,095,969
Number of Sequences: 23463169
Number of extensions: 139274796
Number of successful extensions: 336402
Number of sequences better than 100.0: 370
Number of HSP's better than 100.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 335117
Number of HSP's gapped (non-prelim): 694
length of query: 205
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 69
effective length of database: 9,168,204,383
effective search space: 632606102427
effective search space used: 632606102427
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)