BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15388
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P7L4|SC22B_XENTR Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b
PE=2 SV=1
Length = 215
Score = 198 bits (503), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 120/156 (76%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M LLTMIARV DGL L+ASMQ+DE S R +YQNQAKQLFRKLN SP + ++E G
Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQNQAKQLFRKLNEQSPTRCTLEAGAMT 60
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPYAFVEFDSSIK 120
FHYLI++GVC+L LCE F K+A++YLE L EF Q+G + +RPY+F+EFD+ I+
Sbjct: 61 FHYLIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFDEQHGKKVPTVSRPYSFIEFDNYIQ 120
Query: 121 KLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
K +KS+ D+R RRNL+++NTELQDVQRIMV NI+++
Sbjct: 121 KTKKSYIDSRARRNLSSVNTELQDVQRIMVANIEEV 156
>sp|Q7SXP0|S22BB_DANRE Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2
SV=1
Length = 215
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 120/156 (76%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M LLTMIAR+ DGL L+ASMQ+DE R +YQ+QAKQLFRKLN SP + ++E G+
Sbjct: 1 MVLLTMIARLADGLPLAASMQEDEQMGRDLQQYQSQAKQLFRKLNEQSPNRCTLEAGSMS 60
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPYAFVEFDSSIK 120
FHY+I++GVC+L LCE F K+A++YLE L EFH Q+G + +RPY+F+EFD+ I+
Sbjct: 61 FHYVIEKGVCYLVLCEAGFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTYIQ 120
Query: 121 KLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
K +KS+ D+R RRNL+ +NTELQDVQRIMV NI+++
Sbjct: 121 KTKKSYIDSRARRNLSNINTELQDVQRIMVANIEEV 156
>sp|Q5ZJW4|SC22B_CHICK Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2
SV=1
Length = 215
Score = 194 bits (492), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 118/156 (75%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M LLTMIARV DGL L+ASMQ+DE S R +YQ+QAKQLFRKLN SP + ++E G
Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLEAGAMA 60
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPYAFVEFDSSIK 120
FHY+I++GVC+L LCE F K+A++YLE L EF Q+G + +RPY+F+EFD+ I+
Sbjct: 61 FHYIIEKGVCYLVLCEAAFPKKLAFAYLEDLQSEFDEQHGKKVPTVSRPYSFIEFDTYIQ 120
Query: 121 KLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
K +K + D+R RRNL ++NTELQDVQRIMV NI+++
Sbjct: 121 KTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEV 156
>sp|Q4KM74|SC22B_RAT Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 118/156 (75%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M LLTMIARV DGL L+ASMQ+DE S R +YQ+QAKQLFRKLN SP + ++E G
Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLEAGAMT 60
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPYAFVEFDSSIK 120
FHY+I++GVC+L LCE F K+A++YLE L EF Q+G + +RPY+F+EFD+ I+
Sbjct: 61 FHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQ 120
Query: 121 KLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
K +K + D+R RRNL ++NTELQDVQRIMV NI+++
Sbjct: 121 KTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEV 156
>sp|Q5RAI9|SC22B_PONAB Vesicle-trafficking protein SEC22b OS=Pongo abelii GN=SEC22B PE=2
SV=3
Length = 215
Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 118/156 (75%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M LLTMIARV DGL L+ASMQ+DE S R +YQ+QAKQLFRKLN SP + ++E G
Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLEAGAMT 60
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPYAFVEFDSSIK 120
FHY+I++GVC+L LCE F K+A++YLE L EF Q+G + +RPY+F+EFD+ I+
Sbjct: 61 FHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQ 120
Query: 121 KLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
K +K + D+R RRNL ++NTELQDVQRIMV NI+++
Sbjct: 121 KTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEV 156
>sp|O08547|SC22B_MOUSE Vesicle-trafficking protein SEC22b OS=Mus musculus GN=Sec22b PE=1
SV=3
Length = 215
Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 118/156 (75%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M LLTMIARV DGL L+ASMQ+DE S R +YQ+QAKQLFRKLN SP + ++E G
Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLEAGAMT 60
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPYAFVEFDSSIK 120
FHY+I++GVC+L LCE F K+A++YLE L EF Q+G + +RPY+F+EFD+ I+
Sbjct: 61 FHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQ 120
Query: 121 KLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
K +K + D+R RRNL ++NTELQDVQRIMV NI+++
Sbjct: 121 KTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEV 156
>sp|O08595|SC22B_CRIGR Vesicle-trafficking protein SEC22b OS=Cricetulus griseus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 117/156 (75%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M LLTMIARV DGL L+ASMQ+DE S R +YQ+QAKQLFRKLN SP + ++ G
Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLGAGAMT 60
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPYAFVEFDSSIK 120
FHY+I++GVC+L LCE F K+A++YLE L EF Q+G + +RPY+F+EFD+ I+
Sbjct: 61 FHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQ 120
Query: 121 KLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
K +K + D+R RRNL ++NTELQDVQRIMV NI+++
Sbjct: 121 KTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEV 156
>sp|Q7ZV15|S22BA_DANRE Vesicle-trafficking protein SEC22b-A OS=Danio rerio GN=sec22ba PE=2
SV=1
Length = 215
Score = 186 bits (473), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 114/156 (73%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M L TMI RV D L L+ASMQ+DE S R +YQ+QAKQL RKLN SPA+ ++E G
Sbjct: 1 MVLQTMIVRVADSLPLAASMQEDEQSGRDLQKYQSQAKQLCRKLNEQSPARCTLEAGKMC 60
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPYAFVEFDSSIK 120
FHY+I++GVC+LALCE F K+A++YLE L EF QYG + +RPY+F+EFD+ I+
Sbjct: 61 FHYVIEKGVCYLALCEAGFPKKLAFAYLEDLEGEFSEQYGAKVPSVSRPYSFIEFDTYIQ 120
Query: 121 KLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
K KS+ D+R RRNL +N+EL DVQRIMV NI+++
Sbjct: 121 KTIKSYIDSRARRNLGNINSELHDVQRIMVANIEEV 156
>sp|O75396|SC22B_HUMAN Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1
SV=4
Length = 215
Score = 184 bits (466), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 115/156 (73%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M LLTMIARV DGL L+ASMQ+DE S R +YQ+QAKQLFRKLN SP + ++E G
Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLEAGAMT 60
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPYAFVEFDSSIK 120
FHY+I++GVC L LCE F +A++YLE L EF Q+G + +RPY+F+EFD+ I+
Sbjct: 61 FHYIIEQGVCDLVLCEAAFPKTLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQ 120
Query: 121 KLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
K +K + D+ RRNL ++NTELQDVQRIMV NI+++
Sbjct: 121 KTKKLYIDSCARRNLGSINTELQDVQRIMVANIEEV 156
>sp|Q9Y7L0|SEC22_SCHPO Protein transport protein sec22 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec22 PE=3 SV=2
Length = 215
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 108/153 (70%), Gaps = 3/153 (1%)
Query: 5 TMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYFFHYL 64
T + R+ DGL L+AS+ DDE +ER+ ++ QAK + ++L+ S + SIE+G+Y FHYL
Sbjct: 5 TTVTRL-DGLPLAASV-DDESTERNLESHKKQAKLILKRLSPTSEKRASIESGDYTFHYL 62
Query: 65 IDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQ-FEQCTRPYAFVEFDSSIKKLR 123
ID G+C+L +CE+++ K+A+SYLE L+ EF +G + + RPYAFV+FD+ ++K +
Sbjct: 63 IDNGICYLCICEQSYPRKLAFSYLEELAGEFWNSFGEEALQPGLRPYAFVQFDTFMQKSK 122
Query: 124 KSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
+ + R NL+ LNTEL+DV R+M +NI+D+
Sbjct: 123 RVYNTPRANDNLDKLNTELKDVTRVMTKNIEDL 155
>sp|Q94AU2|SEC22_ARATH 25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22
PE=2 SV=1
Length = 218
Score = 136 bits (343), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 108/173 (62%), Gaps = 10/173 (5%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNL--NSPAKLSIETGN 58
M +T+IARV DGL L+ + D S + Y+ Q K LF+ L+ N +++S+ETG
Sbjct: 1 MVKMTLIARVTDGLPLAEGLDDGRDLPDSDM-YKQQVKALFKNLSRGQNDASRMSVETGP 59
Query: 59 YFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPYAFVEFDSS 118
Y FHY+I+ VC+L +C++++ K+A+ YLE L EF G E RPYAF++FD+
Sbjct: 60 YVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTF 119
Query: 119 IKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDINATMNLVLGLGNQID 171
I+K +K + DTR +RN+ LN EL +V +IM +N+ + VLG+G ++D
Sbjct: 120 IQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQE-------VLGVGEKLD 165
>sp|Q6C880|SEC22_YARLI Protein transport protein SEC22 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SEC22 PE=3 SV=1
Length = 213
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M L T+I R DGL LSAS+ D + + E + Q K + +KL+ NS + SIE+GNY
Sbjct: 1 MVLSTLIMRASDGLPLSASVDD---GQENLSEQKKQCKLVTQKLSANSADRASIESGNYV 57
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQ-FEQCTRPYAFVEFDSSI 119
HYL+ G+ + + E ++ K+A+SYL+ L EF +G + ++ RPY FVEFD+ +
Sbjct: 58 IHYLMKDGIVYYCISESSYPRKLAFSYLDELDREFQKSHGQEALKEGVRPYKFVEFDTFM 117
Query: 120 KKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
+K ++ + DTR NL+ LNTELQDV R+M +NI+D+
Sbjct: 118 QKTKRVYQDTRATHNLDKLNTELQDVTRVMTKNIEDL 154
>sp|Q6CJA0|SEC22_KLULA Protein transport protein SEC22 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SEC22 PE=3 SV=1
Length = 214
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 93/157 (59%), Gaps = 4/157 (2%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M T+I R DGL L AS+ DD ++ S E + + K L + S + ++E+G++
Sbjct: 1 MIRSTLIFR-EDGLPLCASVDDD--TDPSLQEQKKKVKILISRFTPTSANEATVESGDFE 57
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQC-TRPYAFVEFDSSI 119
HY+ V ++ + E+ + +A+SYL + EF YGGQ + RPY FV FD+ +
Sbjct: 58 IHYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYGGQLSKSNVRPYEFVSFDNFL 117
Query: 120 KKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
+K +K + D RV+ N++ LN +L+ V++IM +NI+D+
Sbjct: 118 QKTKKVYNDKRVQGNMDQLNQDLKGVKQIMTKNIEDL 154
>sp|Q6FWT0|SEC22_CANGA Protein transport protein SEC22 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SEC22 PE=3 SV=1
Length = 215
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 91/146 (62%), Gaps = 2/146 (1%)
Query: 12 DGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYFFHYLIDRGVCF 71
DGL L +S+ DD+ S+ S E + + K + ++ S + ++E+ + HY+ +GV +
Sbjct: 11 DGLPLCSSV-DDDISDLSLNEQKKRIKMVVSRMTPQSANEATLESKDSEIHYIRQQGVIY 69
Query: 72 LALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCT-RPYAFVEFDSSIKKLRKSFTDTR 130
+CE + +A+SYL +++EF Y + + T RPYAF FD+ +++ +K+++D +
Sbjct: 70 FVICEAGYPRNLAFSYLNDVAVEFQHSYSNELSKPTIRPYAFASFDTFLQRTKKAYSDKK 129
Query: 131 VRRNLNTLNTELQDVQRIMVQNIDDI 156
V+ NL+ LN EL V++IM +NI+D+
Sbjct: 130 VQDNLDQLNQELVGVKQIMSKNIEDL 155
>sp|Q74ZD2|SEC22_ASHGO Protein transport protein SEC22 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC22
PE=3 SV=2
Length = 214
Score = 97.1 bits (240), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 94/157 (59%), Gaps = 4/157 (2%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M T+I R DGL L +S+ DD ++ S + + + K L + S + ++E+G Y
Sbjct: 1 MIKSTLIFR-DDGLPLCSSVDDD--TDPSLADQKKKVKVLISRFTPQSANEATLESGAYE 57
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQF-EQCTRPYAFVEFDSSI 119
HY+ + V ++ + E+ + +A++YL + EF YG ++ + RPYAFV FD+ +
Sbjct: 58 MHYVRQQSVVYIVIVERGYPRNLAFAYLADVRHEFEHSYGNEYVKPSVRPYAFVSFDNFL 117
Query: 120 KKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
+K +K + D RV+ NL+ LN++L V++IM +NI+D+
Sbjct: 118 QKTKKIYNDKRVQGNLDQLNSDLLGVKQIMTKNIEDL 154
>sp|P22214|SEC22_YEAST Protein transport protein SEC22 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC22 PE=1 SV=1
Length = 214
Score = 93.6 bits (231), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 91/153 (59%), Gaps = 4/153 (2%)
Query: 5 TMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYFFHYL 64
T+I R DGL L S+ D ++ S E + + K + +L S + ++E+G++ HYL
Sbjct: 5 TLIYR-EDGLPLCTSV--DNENDPSLFEQKQKVKIVVSRLTPQSATEATLESGSFEIHYL 61
Query: 65 IDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCT-RPYAFVEFDSSIKKLR 123
V + +CE + +A+SYL ++ EF + ++ + T RPY FV FD+ ++ +
Sbjct: 62 KKSMVYYFVICESGYPRNLAFSYLNDIAQEFEHSFANEYPKPTVRPYQFVNFDNFLQMTK 121
Query: 124 KSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
KS++D +V+ NL+ LN EL V++IM +NI+D+
Sbjct: 122 KSYSDKKVQDNLDQLNQELVGVKQIMSKNIEDL 154
>sp|Q2YDJ2|SC22C_BOVIN Vesicle-trafficking protein SEC22c OS=Bos taurus GN=SEC22C PE=2
SV=1
Length = 303
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
+ L + RVRDGL LSAS D Y + LE + + K L +L P + S E ++
Sbjct: 3 LILFACVVRVRDGLPLSAS--TDFYHSQDFLECRRRLKTLALRLA-QYPGRGSAEGCDFS 59
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQ-FEQCTRPYAFVEFDSSI 119
H+ R V +A+C +A+ +LE+L EF Y +RPYAF+EFD+ I
Sbjct: 60 IHFSSSRDVACMAICSLQCPAAMAFCFLETLWWEFTASYDTTCVGLASRPYAFLEFDNVI 119
Query: 120 KKLRKSF---TDTRVRRNLNTLNTEL--QDVQRIMVQNIDDINATMN 161
+K++ F + T++ +L + EL Q + +++ D N MN
Sbjct: 120 QKVKWHFNYVSSTQMDSSLGKIQEELKFQPPVVLTLEDTDVANGVMN 166
>sp|Q8BXT9|SC22C_MOUSE Vesicle-trafficking protein SEC22c OS=Mus musculus GN=Sec22c PE=2
SV=1
Length = 303
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M L I RVRDGL LSAS D Y + LE + Q K L ++L P + E+ ++
Sbjct: 3 MILFASIVRVRDGLPLSAS--TDFYYAQEFLECRRQLKTLAQRLA-RHPGRGCAESCDFL 59
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQ-FEQCTRPYAFVEFDSSI 119
++ V +A+C + +A+ +LE+L +F Y +RPYAF+EFDS I
Sbjct: 60 IYFSSSGDVACMAICSRQCPAAMAFCFLEALWWDFIASYDTTCVGLASRPYAFLEFDSVI 119
Query: 120 KKLRKSF---TDTRVRRNLNTLNTEL--QDVQRIMVQNIDDINATMN 161
+K + F + ++++ L + EL Q + +++ D N +N
Sbjct: 120 QKTKWHFNHMSSSQMKSGLEKIQEELEFQPPAVLSLEDTDVANGMLN 166
>sp|Q9BRL7|SC22C_HUMAN Vesicle-trafficking protein SEC22c OS=Homo sapiens GN=SEC22C PE=2
SV=1
Length = 303
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 9/167 (5%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
+ + RVRDGL LSAS D Y + LE++ + K L +L P + S E ++
Sbjct: 3 VIFFACVVRVRDGLPLSAS--TDFYHTQDFLEWRRRLKSLALRLA-QYPGRGSAEGCDFS 59
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQ-FEQCTRPYAFVEFDSSI 119
H+ V +A+C +A+ +LE+L EF Y +RPYAF+EFDS I
Sbjct: 60 IHFSSFGDVACMAICSCQCPAAMAFCFLETLWWEFTASYDTTCIGLASRPYAFLEFDSII 119
Query: 120 KKLRKSF---TDTRVRRNLNTLNTE--LQDVQRIMVQNIDDINATMN 161
+K++ F + +++ +L + E LQ + +++ D N MN
Sbjct: 120 QKVKWHFNYVSSSQMECSLEKIQEELKLQPPAVLTLEDTDVANGVMN 166
>sp|Q96IW7|SC22A_HUMAN Vesicle-trafficking protein SEC22a OS=Homo sapiens GN=SEC22A PE=1
SV=1
Length = 307
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTL-EYQNQAKQLFRKLNLNSPAKLSIETGNY 59
M L + RVRDGL LSAS +Y + + + E + K L RKL P + +++TG+Y
Sbjct: 3 MILSASVIRVRDGLPLSAS---TDYEQSTGMQECRKYFKMLSRKLA-QLPDRCTLKTGHY 58
Query: 60 FFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYG-GQFEQCTRPYAFVEFDSS 118
+++ GV ++ LC + + +A+S+L+ L EF Y + RPY F+EFD+
Sbjct: 59 NINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNF 118
Query: 119 IKKLRKSFTDTR---VRRNLNTLNTELQ 143
I++ ++ + + R + NL+ + TE++
Sbjct: 119 IQRTKQRYNNPRSLSTKINLSDMQTEIK 146
>sp|Q4R866|SC22A_MACFA Vesicle-trafficking protein SEC22a OS=Macaca fascicularis GN=SEC22A
PE=2 SV=1
Length = 307
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTL-EYQNQAKQLFRKLNLNSPAKLSIETGNY 59
M L + RVRDGL LSAS +Y + + + E + K L RKL P + +++TG+Y
Sbjct: 3 MILSASVIRVRDGLPLSAS---TDYEQSTGMQECRKYFKMLSRKLA-QLPDRCTLKTGHY 58
Query: 60 FFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYG-GQFEQCTRPYAFVEFDSS 118
+++ GV ++ LC + +A+S+L+ L EF Y + RPY F+EFD+
Sbjct: 59 NINFISSLGVSYMMLCTDNYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNF 118
Query: 119 IKKLRKSFTDTR---VRRNLNTLNTELQ 143
I++ ++ + + R + NL+ + TE++
Sbjct: 119 IQRTKQRYNNPRSLSTKINLSDMQTEIK 146
>sp|Q8BH47|SC22A_MOUSE Vesicle-trafficking protein SEC22a OS=Mus musculus GN=Sec22a PE=2
SV=1
Length = 307
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTL-EYQNQAKQLFRKLNLNSPAKLSIETGNY 59
M L + RVRDGL LSAS +Y + + + E + K L RKL P + +++TG Y
Sbjct: 3 MILSASVIRVRDGLPLSAS---TDYEQSTGMQECRKYFKMLSRKLA-QFPDRCTLKTGRY 58
Query: 60 FFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYG-GQFEQCTRPYAFVEFDSS 118
+++ GV ++ LC + + +A+S+L+ L EF Y + RPY F+EFD+
Sbjct: 59 NINFISSLGVSYMMLCSENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNF 118
Query: 119 IKKLRKSFTDTR---VRRNLNTLNTELQ 143
I++ ++ + + R + NL+ + E++
Sbjct: 119 IQRTKQRYNNPRSLSTKINLSDMQMEIK 146
>sp|Q642F4|SC22A_RAT Vesicle-trafficking protein SEC22a OS=Rattus norvegicus GN=Sec22a
PE=2 SV=1
Length = 307
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 1 MFLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYF 60
M L + RVRDGL LSAS D E S E + K L RKL P + +++TG +
Sbjct: 3 MILSASVVRVRDGLPLSAS-TDCEQSA-GVQECRKYFKMLSRKLA-QFPDRCTLKTGRHN 59
Query: 61 FHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYG-GQFEQCTRPYAFVEFDSSI 119
+++ GV ++ LC + + +A+S+L+ L EF Y + RPY F+EFD+ I
Sbjct: 60 INFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFI 119
Query: 120 KKLRKSFTDTR---VRRNLNTLNTELQ 143
++ ++ + + R + NL+ + E++
Sbjct: 120 QRTKQRYNNPRSLSTKINLSDMQMEIK 146
>sp|Q9FMR5|VA714_ARATH Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana
GN=VAMP714 PE=2 SV=1
Length = 221
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 48 SPAKLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCT 107
S +L Y FH L G+ FL + TF +V +SYLE + + F Y G+
Sbjct: 41 SDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNY-GKVAHNA 99
Query: 108 RPYAFV-EFDSSIKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
YA EF + + + F+ LN + E+ +++ +MV+NI+ I
Sbjct: 100 PAYAMNDEFSRVLHQQMEFFSSNPSVDTLNRVRGEVSEIRSVMVENIEKI 149
>sp|P70280|VAMP7_MOUSE Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=1
SV=1
Length = 220
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 51 KLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPY 110
KL+ GNY FHY+ + +L + + F A+S+L + F YG + Q PY
Sbjct: 42 KLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSR-AQTALPY 100
Query: 111 AF-VEFDSSIKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNID 154
A EF S + K ++ + + ++ +++ IMV+NID
Sbjct: 101 AMNSEFSSVLAAQLKHHSENKSLDKVMETQAQVDELKGIMVRNID 145
>sp|Q5ZL74|VAMP7_CHICK Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7
PE=2 SV=1
Length = 220
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 51 KLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPY 110
KL+ GNY FHY+ + +L + + F A+++L + F YG + Q PY
Sbjct: 42 KLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTYGSR-AQTALPY 100
Query: 111 AF-VEFDSSIKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNID 154
A EF S + K ++++ + ++ +++ IMV+NID
Sbjct: 101 AMNSEFSSVLAAQLKYHSESKGTDQVAETQAQVDELKGIMVRNID 145
>sp|Q17QI5|VAMP7_BOVIN Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2
SV=1
Length = 220
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 51 KLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPY 110
KL+ GNY FHY+ + +L + + F A+++L + F YG + Q PY
Sbjct: 42 KLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSR-AQTALPY 100
Query: 111 AF-VEFDSSIKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNID 154
A EF S + K ++ + + ++ +++ IMV+NID
Sbjct: 101 AMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNID 145
>sp|P51809|VAMP7_HUMAN Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1
SV=3
Length = 220
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 51 KLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPY 110
KL+ GNY FHY+ + +L + + F A+++L + F YG + Q PY
Sbjct: 42 KLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSR-AQTALPY 100
Query: 111 AF-VEFDSSIKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNID 154
A EF S + K ++ + + ++ +++ IMV+NID
Sbjct: 101 AMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNID 145
>sp|Q9JHW5|VAMP7_RAT Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7
PE=1 SV=1
Length = 220
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 51 KLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPY 110
KL+ GNY FHY+ + +L + + F A+ +L + F YG + Q PY
Sbjct: 42 KLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTYGSR-AQTALPY 100
Query: 111 AF-VEFDSSIKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNID 154
A EF S + K ++ + + ++ +++ IMV+NID
Sbjct: 101 AMNSEFSSVLAAQLKHHSENQSLDRVTETQAQVDELKGIMVRNID 145
>sp|Q5RF94|VAMP7_PONAB Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2
SV=3
Length = 220
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 51 KLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPY 110
KL+ GNY FHY+ + +L + + F A+++L + F YG + Q PY
Sbjct: 42 KLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSR-AQTALPY 100
Query: 111 AF-VEFDSSIKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNID 154
A EF S + K ++ + + ++ +++ IMV+NID
Sbjct: 101 AMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNID 145
>sp|Q9SIQ9|VA712_ARATH Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana
GN=VAMP712 PE=3 SV=1
Length = 219
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 37 AKQLFRKLNLNSPAKLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFH 96
AKQ+ K+ N + +S Y FH G+ L + ++ ++ +S+LE + F
Sbjct: 29 AKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFV 88
Query: 97 GQYGGQFEQCTRPYAFV-EFDSSIKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDD 155
YG + YA EF + + + +++ ++ + E+ V+ +M++NID+
Sbjct: 89 RTYGRAIHS-AQAYAMNDEFSRVLNQQIEYYSNDPNADTISRIKGEMNQVRDVMIENIDN 147
Query: 156 I 156
I
Sbjct: 148 I 148
>sp|O49377|VA711_ARATH Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana
GN=VAMP711 PE=2 SV=2
Length = 219
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 54/120 (45%)
Query: 37 AKQLFRKLNLNSPAKLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFH 96
AKQ+ K+ ++ + +S Y FH G+ L + E+T ++ +++LE + F
Sbjct: 29 AKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFV 88
Query: 97 GQYGGQFEQCTRPYAFVEFDSSIKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDI 156
YG EF + + +++ +N + E+ V+ +M++NID +
Sbjct: 89 RTYGRAVHTALAYAMNEEFSRVLSQQIDYYSNDPNADRINRIKGEMNQVRGVMIENIDKV 148
>sp|Q86AQ7|VAM7B_DICDI Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum
GN=vamp7B PE=3 SV=1
Length = 260
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 42 RKLNLNSP--AKLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQY 99
R L+L P K+S Y FHYL+ + +L + ++ F ++ +++L+ + F Y
Sbjct: 31 RILDLIPPNDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMY 90
Query: 100 GGQFEQCTRPYAFVEFDSSIKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNI 153
G + + +F +++ L +++T ++ E+ +V+ I+V +I
Sbjct: 91 GDKGKTAIAYGMNSDFSRTLENLMDHYSNTTRVDTMSRTMAEIDEVKNILVSDI 144
>sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana
GN=VAMP724 PE=2 SV=2
Length = 222
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 2 FLLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYFF 61
F+ + +AR G ++ A EY+E T + + A Q +KL +S +K + ++ F
Sbjct: 6 FIYSFVAR---GTMILA-----EYTE-FTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTF 56
Query: 62 HYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPYAF-VEFDSSIK 120
++L++ G + + + + S +++ ++LE + +F +YGG + EF +K
Sbjct: 57 NFLVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMK 116
Query: 121 KLRKSFTDTRVR-RNLNTLNTELQDVQRIMVQNID 154
+ D L + ++ +V+ IM++NID
Sbjct: 117 EHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENID 151
>sp|Q9UF83|YM012_HUMAN Uncharacterized protein DKFZp434B061 OS=Homo sapiens PE=2 SV=2
Length = 564
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 165 GLGNQIDLTGIPDQVRLLGLPDKHTLSGIPDQVRLFIGLPDEHTLSGRPDRY 216
G ++ LTG P + L G P + +L G P + L IG P +L+G P R
Sbjct: 329 GTPSRASLTGSPSRASLTGTPSRASLIGTPSRASL-IGTPSRASLTGTPPRA 379
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 165 GLGNQIDLTGIPDQVRLLGLPDKHTLSGIPDQVRLFIGLPDEHTLSG 211
G ++ LTG P + L+G P + +L G P + L G P +L+G
Sbjct: 338 GSPSRASLTGTPSRASLIGTPSRASLIGTPSRASL-TGTPPRASLTG 383
>sp|Q9LFP1|VA713_ARATH Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana
GN=VAMP713 PE=2 SV=1
Length = 221
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 2/145 (1%)
Query: 13 GLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLN-SPAKLSIETGNYFFHYLIDRGVCF 71
L+ ++ E+S ST + +KQ+ KL N S + +S Y FH G+
Sbjct: 6 ALVARGTVVLSEFSATST-NASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTV 64
Query: 72 LALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQCTRPYAFVEFDSSIKKLRKSFTDTRV 131
L + ++T + +++L+ + F YG EF + + + +++
Sbjct: 65 LCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRVLSQQMEFYSNDPN 124
Query: 132 RRNLNTLNTELQDVQRIMVQNIDDI 156
++ + E+ V+ +M++NID +
Sbjct: 125 ADRMSRIKGEMSQVRNVMIENIDKV 149
>sp|Q6AFZ2|SYV_LEIXX Valine--tRNA ligase OS=Leifsonia xyli subsp. xyli (strain CTCB07)
GN=valS PE=3 SV=1
Length = 862
Score = 37.4 bits (85), Expect = 0.077, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 19/105 (18%)
Query: 24 EYSERSTLEYQNQAKQLFRKLNLN--------SPAKLSIETGNYFFHYLIDRGVCFLALC 75
E ER T+E + Q + L+R L L+ + + S+ T F + RG + AL
Sbjct: 140 ELCERLTVEDEKQFEALWRSLGLSVDWSQTYRTIGEESLRTSQLAFLRNVKRGEAYQALA 199
Query: 76 ----EKTFSTKVAYSYLESLS-------LEFHGQYGGQFEQCTRP 109
+ TF T VA + LE + FHG+ G F + TRP
Sbjct: 200 PTLWDITFRTAVAQAELEDRDQPSAYHRVAFHGEAGPVFIETTRP 244
>sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726 OS=Arabidopsis
thaliana GN=VAMP726 PE=3 SV=2
Length = 220
Score = 37.4 bits (85), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 37 AKQLFRKLNLNSPAKLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFH 96
A Q +KL +S K + + F+YL D G + + ++ ++ ++LE + +F+
Sbjct: 32 AAQCLQKLP-SSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFN 90
Query: 97 GQYGGQFEQCTRPYAF-VEFDSSIKKLRKSFTDTRVR-RNLNTLNTELQDVQRIMVQNID 154
+YGG + + EF S +K+ + D L+ + ++ +V+ +M++NI+
Sbjct: 91 KRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIE 150
Query: 155 DINATMNLVLGLGNQIDL 172
VL G +I+L
Sbjct: 151 K-------VLDRGEKIEL 161
>sp|Q9ZTW3|VA721_ARATH Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana
GN=VAMP721 PE=1 SV=1
Length = 219
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 37 AKQLFRKLNLNSPAKLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFH 96
A Q +KL +S K + + F+YL++ G + + + ++ S+LE + +F+
Sbjct: 32 AAQCLQKLP-SSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFN 90
Query: 97 GQYGGQFEQCTRPYAF-VEFDSSIKKLRKSFTDTRVR-RNLNTLNTELQDVQRIMVQNID 154
+YGG + + EF S +K+ + D L + ++ +V+ +M++NI+
Sbjct: 91 KRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIE 150
Query: 155 DINATMNLVLGLGNQIDL 172
VL G +I+L
Sbjct: 151 K-------VLDRGEKIEL 161
>sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana
GN=VAMP725 PE=2 SV=2
Length = 285
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 37 AKQLFRKLNLNSPAKLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFH 96
A Q +KL +S K + + F+YL++ G + + ++ ++ ++LE + +F+
Sbjct: 97 AAQCLQKLP-SSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFN 155
Query: 97 GQYGGQFEQCTRPYAF-VEFDSSIKKLRKSFTDTRVR-RNLNTLNTELQDVQRIMVQNID 154
+YGG + + EF S +K+ + D L + ++ +V+ +M++NI+
Sbjct: 156 KRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIE 215
Query: 155 DINATMNLVLGLGNQIDL 172
VL G +I+L
Sbjct: 216 K-------VLDRGEKIEL 226
>sp|P47192|VA722_ARATH Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana
GN=VAMP722 PE=2 SV=2
Length = 221
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 37 AKQLFRKLNLNSPAKLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFH 96
A Q +KL +S K + + F+YL++ G + + + ++ ++LE + +F+
Sbjct: 32 AAQCLQKLP-SSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFN 90
Query: 97 GQYGGQFEQCTRPYAF-VEFDSSIKKLRKSFTDTRVR-RNLNTLNTELQDVQRIMVQNID 154
+YGG + + EF S +K+ + D L + ++ +V+ +M++NI+
Sbjct: 91 KRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIE 150
Query: 155 DINATMNLVLGLGNQIDL 172
VL G +I+L
Sbjct: 151 K-------VLDRGEKIEL 161
>sp|Q54NW7|VAM7A_DICDI Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum
GN=vamp7A PE=1 SV=1
Length = 216
Score = 35.0 bits (79), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 37 AKQLFRKLNLNSPAKLSIETG-NYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEF 95
A++L K+ P I T N+ FHY+ + + FL LC + ++ +L + +F
Sbjct: 32 ARRLITKI---PPTSKKIYTSENHNFHYISENDLAFLCLCHEKLGVQIPSEFLSDIRQQF 88
Query: 96 HGQYGGQFEQ 105
YG F Q
Sbjct: 89 IRSYGQSFSQ 98
>sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana
GN=VAMP727 PE=2 SV=1
Length = 240
Score = 34.3 bits (77), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 29/157 (18%)
Query: 37 AKQLFRKLNLNSPAKLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFH 96
A Q +KL NS +K + + F++L+D G FL + +++ V + +LE + +F
Sbjct: 32 AVQCLQKLPTNS-SKYTYSCDGHTFNFLVDNGFVFLVVADESTGRSVPFVFLERVKEDFK 90
Query: 97 GQYGGQFEQCTR-PYAFV-------------------EFDSSIKK-LRKSFTDTRVRRNL 135
+Y + R P A EF +K+ ++ + L
Sbjct: 91 KRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQYCMSHPEEMSKL 150
Query: 136 NTLNTELQDVQRIMVQNIDDINATMNLVLGLGNQIDL 172
+ L ++ +V+ IM+ NI+ VL G +I+L
Sbjct: 151 SKLKAQITEVKGIMMDNIEK-------VLDRGEKIEL 180
>sp|O60073|YKT6_SCHPO Synaptobrevin homolog ykt6 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ykt6 PE=3 SV=1
Length = 197
Score = 33.9 bits (76), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 47 NSPAKLSIETGNYFFH-YLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYG-GQFE 104
N + +E NY FH Y G+C + +K + +VAY+ L + EF + ++E
Sbjct: 52 NPGQRQDVEQSNYVFHVYNRSDGLCGVIASDKEYPLRVAYTLLNKILDEFLTKNPRTKWE 111
Query: 105 QCTRPYAFVEFDSSIKKL---RKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDINATMN 161
+F E D+ + K +++ T RV++ L+ E +DV ++ T+
Sbjct: 112 SGAVTLSFPELDTYLSKYQDPKQADTIMRVQQELD----ETKDV----------LHKTIE 157
Query: 162 LVLGLGNQID 171
VL G ++D
Sbjct: 158 SVLARGEKLD 167
>sp|Q197F8|002R_IIV3 Uncharacterized protein 002R OS=Invertebrate iridescent virus 3
GN=IIV3-002R PE=4 SV=1
Length = 458
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 103 FEQCTRPYAFVEFDSSIKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDINATMNL 162
FE R YAF E I+++ FTDTR L T +V R++++ IDD+N +
Sbjct: 121 FEDFQREYAFPE---KIQEIH--FTDTRAEEIKAILET-TPNVTRLVIRRIDDMNYNTHG 174
Query: 163 VLGLGN 168
LGL +
Sbjct: 175 DLGLDD 180
>sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp.
japonica GN=Os12g0481100 PE=2 SV=2
Length = 802
Score = 32.0 bits (71), Expect = 3.2, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 3 LLTMIARVRDGLILSASMQDDEYSERSTLEYQNQAKQLFRKLNLNSPAKLSIETGNYFFH 62
L+ M R R ++ SA+M + E +E TL N+ +L +L PA L+ E
Sbjct: 364 LIRMCPRRRQTMLFSATMTE-EINELVTLSL-NKPVRLEADPSLKRPATLTEEVVRIRRA 421
Query: 63 YLIDRGVCFLALCEKTFSTKV 83
++ LALC KTF KV
Sbjct: 422 REANQEAVLLALCLKTFKDKV 442
>sp|Q8VY69|VA723_ARATH Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana
GN=VAMP723 PE=2 SV=1
Length = 217
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 47 NSPAKLSIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYGGQFEQC 106
+S K + + F+ L++ G + + + ++ ++LE + +F+ +YGG+
Sbjct: 41 SSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAAT 100
Query: 107 TRPYAF-VEFDSSIKKLRKSFTDTRVR-RNLNTLNTELQDVQRIMVQNIDDI 156
+ + EF S++K+ + D NL ++ +V+ +M++NI+ +
Sbjct: 101 DQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKV 152
>sp|Q9LVM9|YKT62_ARATH VAMP-like protein YKT62 OS=Arabidopsis thaliana GN=YKT62 PE=2 SV=1
Length = 199
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 15/121 (12%)
Query: 53 SIETGNYFFHYLIDRGVCFLALCEKTFSTKVAYSYLESLSLEFHGQYG--GQFEQCTRPY 110
S++ Y H G+C + + + + A+S L + + YG +FE ++P+
Sbjct: 62 SVKHEEYKVHAYNINGLCAVGFMDDHYPVRSAFSLLNQVLDVYQKDYGDTWRFENSSQPW 121
Query: 111 AFVEFDSSIKKLRKSFTDTRVRRNLNTLNTELQDVQRIMVQNIDDINATMNLVLGLGNQI 170
+ +K+ F D L + EL + + I+ + ID VL G ++
Sbjct: 122 PY------LKEASDKFRDPAEADKLLKIQRELDETKIILHKTIDG-------VLARGEKL 168
Query: 171 D 171
D
Sbjct: 169 D 169
>sp|P36015|YKT6_YEAST Synaptobrevin homolog YKT6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YKT6 PE=1 SV=1
Length = 200
Score = 30.4 bits (67), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 53 SIETGNYFFH-YLIDRGVCFLALCEKTFSTKVAYSYLESLSLEF 95
SIE GNY H Y G+C + + +K + + AY+ L + E+
Sbjct: 58 SIEEGNYIGHVYARSEGICGVLITDKEYPVRPAYTLLNKILDEY 101
>sp|O80543|Y1280_ARATH Putative methyltransferase At1g22800 OS=Arabidopsis thaliana
GN=At1g22800 PE=2 SV=2
Length = 355
Score = 30.4 bits (67), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 80 STKVAYSYLESLSLEFHGQYG--GQFEQCTRPYAFVEFDSSIKKLRK 124
STK A+++L SLS G YG G+F+Q + FD +K++ +
Sbjct: 21 STKQAHTFLASLSFSTEGAYGGDGEFQQNSSKVKI--FDRDLKRIHR 65
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,135,209
Number of Sequences: 539616
Number of extensions: 3014726
Number of successful extensions: 7647
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 7577
Number of HSP's gapped (non-prelim): 63
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)